Query 002289
Match_columns 941
No_of_seqs 859 out of 6922
Neff 8.7
Searched_HMMs 46136
Date Thu Mar 28 20:45:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002289.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002289hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.6E-73 7.7E-78 723.1 60.0 259 608-887 689-955 (968)
2 KOG1187 Serine/threonine prote 100.0 3.9E-49 8.5E-54 438.2 27.5 284 595-884 61-353 (361)
3 KOG0615 Serine/threonine prote 100.0 4.4E-47 9.6E-52 398.0 12.4 260 607-925 170-444 (475)
4 KOG0581 Mitogen-activated prot 100.0 4.4E-46 9.5E-51 389.1 18.1 195 612-820 82-280 (364)
5 KOG0659 Cdk activating kinase 100.0 2.4E-46 5.3E-51 371.7 13.9 280 609-923 2-286 (318)
6 KOG0192 Tyrosine kinase specif 100.0 6.6E-45 1.4E-49 401.1 26.4 260 612-889 44-309 (362)
7 KOG0575 Polo-like serine/threo 100.0 1.3E-45 2.9E-50 406.6 18.9 252 609-922 18-273 (592)
8 KOG0661 MAPK related serine/th 100.0 8.8E-46 1.9E-50 394.7 11.3 287 607-926 8-299 (538)
9 KOG0598 Ribosomal protein S6 k 100.0 3.5E-45 7.5E-50 382.4 14.8 272 607-940 23-303 (357)
10 KOG0197 Tyrosine kinases [Sign 100.0 3.7E-45 8E-50 400.0 15.7 264 602-885 199-463 (468)
11 KOG0595 Serine/threonine-prote 100.0 3.1E-44 6.6E-49 377.8 19.7 270 608-918 9-287 (429)
12 KOG0593 Predicted protein kina 100.0 2.5E-45 5.4E-50 369.8 9.6 281 609-924 2-290 (396)
13 KOG0600 Cdc2-related protein k 100.0 7.5E-45 1.6E-49 390.4 13.4 285 608-924 116-406 (560)
14 KOG0591 NIMA (never in mitosis 100.0 2.7E-44 6E-49 358.8 11.7 257 609-882 19-284 (375)
15 KOG0660 Mitogen-activated prot 100.0 1.7E-43 3.7E-48 368.1 14.5 286 607-923 20-315 (359)
16 KOG0663 Protein kinase PITSLRE 100.0 3.5E-43 7.7E-48 359.0 15.4 283 609-923 76-366 (419)
17 KOG0592 3-phosphoinositide-dep 100.0 7.6E-43 1.7E-47 377.8 17.6 266 608-928 72-348 (604)
18 KOG0616 cAMP-dependent protein 100.0 7.9E-43 1.7E-47 351.6 16.2 268 608-940 43-319 (355)
19 KOG1026 Nerve growth factor re 100.0 1E-42 2.3E-47 398.1 18.0 264 606-887 483-766 (774)
20 KOG0578 p21-activated serine/t 100.0 3.2E-42 7E-47 376.9 14.2 265 608-932 272-537 (550)
21 KOG0582 Ste20-like serine/thre 100.0 1E-41 2.2E-46 361.0 17.1 274 607-930 24-305 (516)
22 KOG0597 Serine-threonine prote 100.0 1.1E-41 2.5E-46 367.7 14.8 256 609-927 2-260 (808)
23 KOG0198 MEKK and related serin 100.0 1.8E-41 3.9E-46 362.2 16.0 203 609-819 17-224 (313)
24 KOG0193 Serine/threonine prote 100.0 3.9E-41 8.5E-46 368.7 17.7 267 600-888 383-658 (678)
25 KOG0605 NDR and related serine 100.0 6.4E-41 1.4E-45 363.7 18.3 269 607-927 139-454 (550)
26 KOG0667 Dual-specificity tyros 100.0 1.3E-41 2.9E-46 379.6 13.4 291 610-926 187-510 (586)
27 KOG0196 Tyrosine kinase, EPH ( 100.0 1.5E-41 3.3E-46 379.4 13.2 273 596-886 607-894 (996)
28 KOG0594 Protein kinase PCTAIRE 100.0 3.9E-41 8.4E-46 352.5 14.6 293 608-931 10-315 (323)
29 KOG0583 Serine/threonine prote 100.0 1.8E-40 3.8E-45 369.7 20.4 257 606-923 14-280 (370)
30 cd05631 STKc_GRK4 Catalytic do 100.0 2.8E-40 6.2E-45 361.5 19.1 201 610-821 1-205 (285)
31 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.9E-40 8.5E-45 360.9 19.6 281 609-921 5-288 (288)
32 KOG0033 Ca2+/calmodulin-depend 100.0 5.3E-42 1.1E-46 335.7 4.2 259 607-924 9-273 (355)
33 PHA03212 serine/threonine kina 100.0 6E-40 1.3E-44 373.6 21.2 281 608-923 91-381 (391)
34 KOG0658 Glycogen synthase kina 100.0 4.5E-41 9.7E-46 350.7 9.3 275 610-923 25-311 (364)
35 cd05612 STKc_PRKX_like Catalyt 100.0 5.1E-40 1.1E-44 360.6 16.5 253 609-926 1-262 (291)
36 KOG0588 Serine/threonine prote 100.0 2.5E-40 5.5E-45 365.0 13.8 256 609-927 12-272 (786)
37 KOG0610 Putative serine/threon 100.0 9.3E-40 2E-44 343.7 17.3 281 608-941 76-413 (459)
38 PTZ00426 cAMP-dependent protei 100.0 1E-39 2.2E-44 365.4 17.6 199 608-821 29-232 (340)
39 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.1E-39 8.9E-44 361.4 22.1 263 606-885 4-336 (338)
40 cd07848 STKc_CDKL5 Catalytic d 100.0 2.6E-39 5.7E-44 354.2 19.9 284 609-921 1-287 (287)
41 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.9E-39 6.3E-44 356.8 20.4 286 608-924 4-294 (303)
42 cd07862 STKc_CDK6 Catalytic do 100.0 2.7E-39 5.9E-44 354.6 20.0 278 609-921 1-290 (290)
43 KOG0585 Ca2+/calmodulin-depend 100.0 1.5E-39 3.3E-44 346.2 17.2 264 607-926 95-380 (576)
44 KOG0580 Serine/threonine prote 100.0 1.8E-40 3.9E-45 325.4 9.1 255 608-924 21-279 (281)
45 KOG0694 Serine/threonine prote 100.0 2.5E-39 5.4E-44 360.7 18.9 273 606-941 365-647 (694)
46 PTZ00263 protein kinase A cata 100.0 2E-39 4.2E-44 362.2 17.8 198 609-821 18-219 (329)
47 cd05571 STKc_PKB Catalytic dom 100.0 3.4E-39 7.4E-44 359.4 18.2 194 615-820 1-198 (323)
48 cd06650 PKc_MEK1 Catalytic dom 100.0 3.4E-39 7.4E-44 360.8 17.8 297 607-927 3-308 (333)
49 KOG0666 Cyclin C-dependent kin 100.0 1.4E-39 3E-44 328.9 12.0 294 607-925 22-344 (438)
50 cd06649 PKc_MEK2 Catalytic dom 100.0 7.4E-39 1.6E-43 358.0 19.1 298 608-926 4-309 (331)
51 KOG4721 Serine/threonine prote 100.0 1.2E-39 2.6E-44 351.5 12.0 240 613-883 128-368 (904)
52 KOG1095 Protein tyrosine kinas 100.0 6.2E-39 1.3E-43 380.3 18.6 262 608-887 691-965 (1025)
53 KOG0599 Phosphorylase kinase g 100.0 4.6E-40 1E-44 326.5 7.5 257 608-923 16-288 (411)
54 cd05585 STKc_YPK1_like Catalyt 100.0 7.6E-39 1.6E-43 354.9 18.0 192 617-820 1-196 (312)
55 cd07853 STKc_NLK Catalytic dom 100.0 2E-38 4.3E-43 360.5 21.0 285 610-924 1-294 (372)
56 cd05595 STKc_PKB_beta Catalyti 100.0 1.6E-38 3.4E-43 354.0 19.6 234 615-871 1-238 (323)
57 PTZ00284 protein kinase; Provi 100.0 1E-38 2.2E-43 373.4 18.8 297 602-926 122-446 (467)
58 cd05605 STKc_GRK4_like Catalyt 100.0 2E-38 4.3E-43 346.9 19.8 200 610-820 1-204 (285)
59 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.8E-38 6.2E-43 354.5 21.1 287 610-926 1-298 (338)
60 cd05608 STKc_GRK1 Catalytic do 100.0 1.9E-38 4.2E-43 346.0 18.6 194 617-820 1-200 (280)
61 KOG0194 Protein tyrosine kinas 100.0 1.3E-38 2.7E-43 354.8 17.3 269 600-889 148-426 (474)
62 cd05593 STKc_PKB_gamma Catalyt 100.0 2.5E-38 5.4E-43 353.0 19.5 194 615-820 1-198 (328)
63 cd05590 STKc_nPKC_eta Catalyti 100.0 1.8E-38 3.9E-43 353.0 18.2 195 615-821 1-200 (320)
64 cd07868 STKc_CDK8 Catalytic do 100.0 2.5E-38 5.5E-43 351.7 19.4 290 614-921 6-317 (317)
65 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-38 2.6E-43 356.8 16.4 197 609-820 1-201 (333)
66 cd05614 STKc_MSK2_N N-terminal 100.0 2.4E-38 5.1E-43 354.3 17.9 199 610-819 1-209 (332)
67 cd05584 STKc_p70S6K Catalytic 100.0 2.4E-38 5.2E-43 352.6 17.5 195 615-821 2-204 (323)
68 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.2E-38 1.1E-42 347.8 19.9 285 609-925 6-293 (309)
69 PHA02988 hypothetical protein; 100.0 2.1E-37 4.5E-42 338.3 24.3 261 595-885 11-281 (283)
70 PHA03211 serine/threonine kina 100.0 5.4E-38 1.2E-42 361.7 20.6 286 607-923 167-460 (461)
71 cd05618 STKc_aPKC_iota Catalyt 100.0 2.9E-38 6.4E-43 352.6 17.3 192 615-818 1-197 (329)
72 KOG0032 Ca2+/calmodulin-depend 100.0 9.5E-38 2.1E-42 347.3 20.8 260 607-926 33-301 (382)
73 KOG3653 Transforming growth fa 100.0 2.4E-37 5.3E-42 330.0 22.6 270 608-889 209-509 (534)
74 cd05599 STKc_NDR_like Catalyti 100.0 2.8E-38 6E-43 358.4 16.3 208 609-821 1-243 (364)
75 cd05594 STKc_PKB_alpha Catalyt 100.0 3.3E-38 7.1E-43 351.9 16.4 195 615-821 1-200 (325)
76 cd05628 STKc_NDR1 Catalytic do 100.0 7.4E-38 1.6E-42 354.5 19.5 208 609-821 1-240 (363)
77 cd05596 STKc_ROCK Catalytic do 100.0 3.2E-38 7E-43 357.8 16.4 261 607-926 41-312 (370)
78 cd05621 STKc_ROCK2 Catalytic d 100.0 6E-38 1.3E-42 355.2 18.3 205 605-821 39-251 (370)
79 cd07876 STKc_JNK2 Catalytic do 100.0 1.6E-37 3.4E-42 351.4 21.6 290 607-923 19-320 (359)
80 PLN00034 mitogen-activated pro 100.0 8.2E-38 1.8E-42 352.8 18.9 258 610-929 75-339 (353)
81 cd05589 STKc_PKN Catalytic dom 100.0 5.9E-38 1.3E-42 349.7 17.5 238 611-872 1-245 (324)
82 cd05588 STKc_aPKC Catalytic do 100.0 6.3E-38 1.4E-42 350.1 17.6 192 615-818 1-197 (329)
83 KOG0201 Serine/threonine prote 100.0 1.1E-38 2.4E-43 338.2 10.8 250 608-879 12-263 (467)
84 cd05626 STKc_LATS2 Catalytic d 100.0 8.6E-38 1.9E-42 356.2 18.9 207 610-821 2-252 (381)
85 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-37 2.5E-42 347.4 19.5 200 610-821 1-205 (324)
86 cd05629 STKc_NDR_like_fungal C 100.0 4.4E-38 9.4E-43 358.4 16.3 208 609-821 1-252 (377)
87 KOG0611 Predicted serine/threo 100.0 1.8E-38 3.9E-43 330.1 11.7 200 608-820 52-256 (668)
88 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.2E-38 6.9E-43 356.0 14.9 208 609-821 1-234 (350)
89 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.9E-37 8.4E-42 333.2 22.3 256 608-883 4-265 (266)
90 KOG0589 Serine/threonine prote 100.0 9.6E-38 2.1E-42 341.1 17.6 251 609-879 4-258 (426)
91 cd07875 STKc_JNK1 Catalytic do 100.0 3.2E-37 6.8E-42 349.6 22.4 290 607-923 22-323 (364)
92 KOG2345 Serine/threonine prote 100.0 3.2E-38 7E-43 310.8 12.2 267 607-883 19-300 (302)
93 cd05096 PTKc_DDR1 Catalytic do 100.0 7.8E-37 1.7E-41 337.6 24.3 261 608-881 4-303 (304)
94 KOG2052 Activin A type IB rece 100.0 8.1E-37 1.7E-41 323.6 23.0 261 608-885 210-505 (513)
95 cd05072 PTKc_Lyn Catalytic dom 100.0 4E-37 8.7E-42 331.9 21.3 256 607-882 4-260 (261)
96 PHA03209 serine/threonine kina 100.0 1.2E-37 2.6E-42 351.7 18.0 289 607-923 64-356 (357)
97 cd05619 STKc_nPKC_theta Cataly 100.0 2.3E-37 4.9E-42 343.4 19.8 279 615-925 1-285 (316)
98 PTZ00036 glycogen synthase kin 100.0 2.2E-37 4.7E-42 358.2 20.4 279 608-924 65-357 (440)
99 cd05575 STKc_SGK Catalytic dom 100.0 9.7E-38 2.1E-42 347.8 16.8 194 615-820 1-199 (323)
100 KOG1094 Discoidin domain recep 100.0 9.4E-38 2E-42 338.6 16.1 262 607-883 536-804 (807)
101 cd05630 STKc_GRK6 Catalytic do 100.0 1.8E-37 3.9E-42 339.3 18.5 258 610-924 1-267 (285)
102 cd05625 STKc_LATS1 Catalytic d 100.0 8E-38 1.7E-42 356.8 16.3 207 610-821 2-252 (382)
103 KOG4278 Protein tyrosine kinas 100.0 4.1E-38 9E-43 341.7 13.0 265 601-886 259-526 (1157)
104 PF07714 Pkinase_Tyr: Protein 100.0 2.4E-37 5.2E-42 333.4 18.8 250 613-880 3-259 (259)
105 cd07863 STKc_CDK4 Catalytic do 100.0 2.4E-37 5.1E-42 338.8 18.9 277 610-921 1-288 (288)
106 KOG1989 ARK protein kinase fam 100.0 2.6E-37 5.7E-42 356.0 19.9 266 607-887 35-315 (738)
107 cd05620 STKc_nPKC_delta Cataly 100.0 2.2E-37 4.7E-42 343.7 18.4 194 615-820 1-199 (316)
108 KOG0662 Cyclin-dependent kinas 100.0 5.7E-38 1.2E-42 293.5 11.4 283 610-924 3-289 (292)
109 cd05104 PTKc_Kit Catalytic dom 100.0 6.9E-37 1.5E-41 347.5 22.7 261 605-882 31-373 (375)
110 cd05106 PTKc_CSF-1R Catalytic 100.0 5.8E-37 1.3E-41 347.8 22.0 265 603-884 32-373 (374)
111 cd05048 PTKc_Ror Catalytic Dom 100.0 9.9E-37 2.1E-41 333.0 22.9 256 609-882 5-282 (283)
112 cd05598 STKc_LATS Catalytic do 100.0 6.9E-38 1.5E-42 356.7 14.3 208 609-821 1-248 (376)
113 cd05592 STKc_nPKC_theta_delta 100.0 3.8E-37 8.2E-42 341.8 19.7 280 615-926 1-286 (316)
114 cd05148 PTKc_Srm_Brk Catalytic 100.0 4E-37 8.6E-42 331.8 19.3 257 606-882 3-260 (261)
115 cd05616 STKc_cPKC_beta Catalyt 100.0 2.3E-37 5E-42 344.8 17.9 241 610-873 1-246 (323)
116 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-36 2.5E-41 327.4 22.7 251 609-880 4-255 (256)
117 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.8E-37 6.2E-42 344.5 18.4 193 615-819 1-198 (327)
118 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-37 2.5E-42 348.4 15.3 203 609-821 1-213 (330)
119 cd05591 STKc_nPKC_epsilon Cata 100.0 1.4E-37 3E-42 346.3 15.8 195 615-821 1-200 (321)
120 cd07874 STKc_JNK3 Catalytic do 100.0 4.3E-37 9.4E-42 347.3 20.0 291 607-924 15-317 (355)
121 PHA03207 serine/threonine kina 100.0 3.9E-37 8.4E-42 351.9 19.5 286 608-924 91-381 (392)
122 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-37 3.3E-42 346.6 15.7 194 615-820 1-199 (325)
123 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-36 2.8E-41 328.0 22.0 256 607-882 4-260 (261)
124 cd05570 STKc_PKC Catalytic dom 100.0 7E-37 1.5E-41 340.0 20.2 195 615-821 1-200 (318)
125 cd05052 PTKc_Abl Catalytic dom 100.0 1.3E-36 2.7E-41 328.5 21.6 256 608-883 5-262 (263)
126 cd05607 STKc_GRK7 Catalytic do 100.0 1.9E-36 4.1E-41 329.8 23.1 254 617-926 1-262 (277)
127 cd07878 STKc_p38beta_MAPK11 Ca 100.0 9.3E-37 2E-41 343.0 21.3 282 606-924 12-304 (343)
128 cd05615 STKc_cPKC_alpha Cataly 100.0 3.8E-37 8.3E-42 342.8 18.0 200 610-821 1-205 (323)
129 cd05582 STKc_RSK_N N-terminal 100.0 1E-37 2.2E-42 346.8 13.2 238 615-875 2-245 (318)
130 cd05622 STKc_ROCK1 Catalytic d 100.0 7.3E-37 1.6E-41 346.6 20.3 208 602-821 36-251 (371)
131 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-36 2.7E-41 338.0 21.3 289 614-921 6-317 (317)
132 cd05632 STKc_GRK5 Catalytic do 100.0 9.5E-37 2.1E-41 333.6 19.9 200 611-821 2-205 (285)
133 cd05627 STKc_NDR2 Catalytic do 100.0 2.4E-37 5.2E-42 350.0 15.6 208 609-821 1-240 (360)
134 cd05597 STKc_DMPK_like Catalyt 100.0 7E-37 1.5E-41 342.0 18.4 202 609-820 1-211 (331)
135 cd05049 PTKc_Trk Catalytic dom 100.0 2.3E-36 5E-41 329.4 22.0 256 608-881 4-279 (280)
136 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.6E-37 1.9E-41 336.7 18.8 283 609-923 6-291 (301)
137 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.6E-36 5.6E-41 344.0 23.0 264 604-884 32-398 (400)
138 PTZ00267 NIMA-related protein 100.0 2.8E-36 6E-41 352.9 23.7 251 610-878 68-322 (478)
139 cd05071 PTKc_Src Catalytic dom 100.0 2.9E-36 6.4E-41 325.5 22.0 256 608-884 5-261 (262)
140 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.2E-36 6.9E-41 324.7 22.2 255 607-882 4-259 (260)
141 KOG0986 G protein-coupled rece 100.0 2.5E-37 5.4E-42 327.1 13.0 277 607-940 183-468 (591)
142 cd05094 PTKc_TrkC Catalytic do 100.0 4.6E-36 1E-40 329.3 23.6 260 609-886 5-285 (291)
143 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3E-36 6.5E-41 324.3 21.7 251 609-880 4-255 (256)
144 cd07839 STKc_CDK5 Catalytic do 100.0 1.8E-36 4E-41 331.1 20.2 280 610-921 1-284 (284)
145 cd06615 PKc_MEK Catalytic doma 100.0 3.2E-36 7E-41 333.2 22.3 284 609-924 1-293 (308)
146 cd05062 PTKc_IGF-1R Catalytic 100.0 2.8E-36 6E-41 328.5 21.4 258 606-881 3-276 (277)
147 cd05093 PTKc_TrkB Catalytic do 100.0 5.3E-36 1.1E-40 328.3 23.4 261 608-886 4-282 (288)
148 KOG4257 Focal adhesion tyrosin 100.0 1.2E-36 2.6E-41 331.5 17.8 260 605-885 385-651 (974)
149 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-36 3.3E-41 338.8 19.3 206 613-821 2-214 (327)
150 cd05033 PTKc_EphR Catalytic do 100.0 7.8E-36 1.7E-40 322.8 23.7 257 608-883 3-265 (266)
151 cd05602 STKc_SGK1 Catalytic do 100.0 1E-36 2.2E-41 340.0 17.1 239 615-876 1-244 (325)
152 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.1E-36 1.1E-40 323.1 22.0 255 607-882 4-259 (260)
153 cd05054 PTKc_VEGFR Catalytic d 100.0 3.8E-36 8.1E-41 336.6 21.4 263 606-885 4-335 (337)
154 cd05090 PTKc_Ror1 Catalytic do 100.0 6.9E-36 1.5E-40 326.4 22.8 256 609-882 5-282 (283)
155 cd07844 STKc_PCTAIRE_like Cata 100.0 5.9E-36 1.3E-40 328.3 22.3 282 609-921 5-291 (291)
156 cd07860 STKc_CDK2_3 Catalytic 100.0 7.7E-36 1.7E-40 326.1 23.1 279 610-921 1-284 (284)
157 cd05061 PTKc_InsR Catalytic do 100.0 9.2E-36 2E-40 326.4 23.5 260 606-883 3-278 (288)
158 cd07832 STKc_CCRK Catalytic do 100.0 4E-36 8.6E-41 328.6 20.4 282 610-922 1-286 (286)
159 cd07861 STKc_CDK1_euk Catalyti 100.0 7.1E-36 1.5E-40 326.5 22.4 279 610-921 1-285 (285)
160 KOG0607 MAP kinase-interacting 100.0 1.7E-36 3.6E-41 307.5 16.0 282 600-926 74-369 (463)
161 cd05059 PTKc_Tec_like Catalyti 100.0 8.1E-36 1.8E-40 320.8 22.2 251 609-880 4-255 (256)
162 cd05108 PTKc_EGFR Catalytic do 100.0 8.8E-36 1.9E-40 331.1 22.9 258 608-885 6-270 (316)
163 cd05623 STKc_MRCK_alpha Cataly 100.0 1.7E-36 3.7E-41 339.1 17.2 203 609-821 1-212 (332)
164 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-35 3.4E-40 319.4 24.0 254 608-882 5-259 (260)
165 cd05034 PTKc_Src_like Catalyti 100.0 9.8E-36 2.1E-40 321.0 22.3 257 606-882 3-260 (261)
166 cd05603 STKc_SGK2 Catalytic do 100.0 3.3E-36 7.1E-41 335.2 18.6 237 615-874 1-242 (321)
167 PTZ00283 serine/threonine prot 100.0 1.1E-35 2.3E-40 348.2 23.4 255 607-879 30-297 (496)
168 cd05091 PTKc_Ror2 Catalytic do 100.0 6.4E-36 1.4E-40 326.7 20.1 256 609-882 5-282 (283)
169 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-35 4.6E-40 317.2 23.4 249 610-878 1-252 (256)
170 cd08228 STKc_Nek6 Catalytic do 100.0 3.6E-35 7.9E-40 317.7 25.3 257 609-883 2-265 (267)
171 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.6E-35 3.5E-40 324.9 22.5 283 607-921 3-291 (291)
172 cd06619 PKc_MKK5 Catalytic dom 100.0 8E-36 1.7E-40 325.2 19.9 260 609-928 1-263 (279)
173 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.3E-35 5E-40 327.4 23.7 281 606-907 9-314 (314)
174 cd05624 STKc_MRCK_beta Catalyt 100.0 2.7E-36 5.9E-41 337.2 16.2 203 609-821 1-212 (331)
175 cd05053 PTKc_FGFR Catalytic do 100.0 1.3E-35 2.9E-40 325.8 20.9 264 603-884 6-292 (293)
176 cd05039 PTKc_Csk_like Catalyti 100.0 3.7E-35 8E-40 315.6 23.8 250 608-882 5-255 (256)
177 cd05092 PTKc_TrkA Catalytic do 100.0 1.9E-35 4E-40 322.5 21.6 255 609-881 5-279 (280)
178 cd05115 PTKc_Zap-70 Catalytic 100.0 3.6E-35 7.7E-40 316.1 23.5 249 616-883 2-255 (257)
179 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.8E-35 8.3E-40 334.2 25.0 264 603-883 31-399 (401)
180 cd05035 PTKc_Axl_like Catalyti 100.0 3.6E-35 7.7E-40 318.6 23.6 255 611-883 1-272 (273)
181 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.2E-35 4.8E-40 321.4 22.0 257 607-881 4-276 (277)
182 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-35 2.7E-40 329.7 20.2 284 610-921 1-316 (316)
183 cd06655 STKc_PAK2 Catalytic do 100.0 2.4E-35 5.2E-40 324.3 22.3 268 609-936 19-287 (296)
184 cd05089 PTKc_Tie1 Catalytic do 100.0 3.1E-35 6.8E-40 323.6 23.2 258 609-887 2-279 (297)
185 KOG0671 LAMMER dual specificit 100.0 2.2E-37 4.7E-42 323.0 5.6 289 607-924 87-412 (415)
186 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.2E-35 1.8E-39 314.7 25.9 256 609-883 2-265 (267)
187 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.3E-35 7.2E-40 321.0 23.0 266 609-884 3-282 (283)
188 cd05116 PTKc_Syk Catalytic dom 100.0 3.6E-35 7.8E-40 316.0 22.8 248 616-883 2-255 (257)
189 cd05084 PTKc_Fes Catalytic dom 100.0 3.9E-35 8.5E-40 314.6 22.9 248 615-881 1-251 (252)
190 KOG0584 Serine/threonine prote 100.0 1.1E-36 2.5E-41 336.4 11.1 250 614-924 45-302 (632)
191 cd07850 STKc_JNK Catalytic dom 100.0 1.2E-35 2.6E-40 335.3 19.6 290 607-923 14-316 (353)
192 cd05111 PTK_HER3 Pseudokinase 100.0 5.3E-35 1.2E-39 318.8 23.9 258 609-886 7-271 (279)
193 cd05043 PTK_Ryk Pseudokinase d 100.0 3.6E-35 7.8E-40 320.2 22.4 261 607-885 4-278 (280)
194 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.1E-35 9E-40 324.3 23.2 262 607-886 16-302 (307)
195 cd08219 STKc_Nek3 Catalytic do 100.0 3.4E-35 7.3E-40 315.7 21.8 250 610-879 1-252 (255)
196 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-35 4.5E-40 321.4 20.4 257 607-881 4-276 (277)
197 cd07847 STKc_CDKL1_4 Catalytic 100.0 9.4E-36 2E-40 325.6 17.6 279 609-921 1-286 (286)
198 cd05073 PTKc_Hck Catalytic dom 100.0 3.8E-35 8.3E-40 316.4 22.1 256 606-882 3-259 (260)
199 PF00069 Pkinase: Protein kina 100.0 4E-36 8.6E-41 323.5 14.3 198 611-820 1-202 (260)
200 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.8E-35 1E-39 319.9 23.1 267 609-883 4-283 (284)
201 cd05082 PTKc_Csk Catalytic dom 100.0 4.9E-35 1.1E-39 314.7 22.7 249 608-882 5-255 (256)
202 cd05110 PTKc_HER4 Catalytic do 100.0 5E-35 1.1E-39 323.0 23.2 288 608-926 6-300 (303)
203 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-35 3.3E-40 325.5 18.8 281 609-921 5-293 (293)
204 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.5E-35 9.7E-40 323.5 22.7 263 606-886 12-299 (304)
205 KOG1025 Epidermal growth facto 100.0 5.5E-36 1.2E-40 335.6 15.4 256 612-887 699-961 (1177)
206 cd05045 PTKc_RET Catalytic dom 100.0 6.7E-35 1.5E-39 319.8 23.9 258 610-885 1-288 (290)
207 cd06646 STKc_MAP4K5 Catalytic 100.0 3.8E-35 8.3E-40 317.6 21.5 201 608-820 8-212 (267)
208 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.6E-36 1.2E-40 327.5 15.1 280 609-921 1-286 (286)
209 cd07841 STKc_CDK7 Catalytic do 100.0 1.4E-35 3.1E-40 326.4 18.4 281 610-924 1-288 (298)
210 cd05586 STKc_Sck1_like Catalyt 100.0 5E-36 1.1E-40 335.1 15.0 193 617-821 1-201 (330)
211 PHA03210 serine/threonine kina 100.0 4.8E-36 1E-40 352.2 15.5 292 607-927 146-463 (501)
212 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.3E-35 1.6E-39 315.6 23.6 258 608-883 4-267 (268)
213 cd05580 STKc_PKA Catalytic dom 100.0 2.5E-35 5.4E-40 323.3 20.1 198 609-821 1-202 (290)
214 cd05085 PTKc_Fer Catalytic dom 100.0 8.9E-35 1.9E-39 311.4 23.6 247 615-881 1-249 (250)
215 cd06625 STKc_MEKK3_like Cataly 100.0 1.2E-34 2.7E-39 312.6 24.9 204 609-821 2-211 (263)
216 cd05574 STKc_phototropin_like 100.0 2.8E-35 6E-40 327.1 20.3 267 609-926 1-297 (316)
217 cd05075 PTKc_Axl Catalytic dom 100.0 8.9E-35 1.9E-39 315.5 23.7 255 611-883 1-271 (272)
218 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-35 5.1E-40 326.6 19.6 285 608-924 6-296 (309)
219 PRK13184 pknD serine/threonine 100.0 7.9E-35 1.7E-39 348.6 25.5 270 609-889 2-296 (932)
220 cd05055 PTKc_PDGFR Catalytic d 100.0 8.9E-35 1.9E-39 320.8 24.0 260 606-883 32-301 (302)
221 KOG0690 Serine/threonine prote 100.0 6.5E-37 1.4E-41 310.6 6.3 271 608-940 167-446 (516)
222 cd08229 STKc_Nek7 Catalytic do 100.0 9.2E-35 2E-39 314.5 23.6 257 609-883 2-265 (267)
223 cd05066 PTKc_EphR_A Catalytic 100.0 7.5E-35 1.6E-39 315.4 22.7 258 608-883 3-266 (267)
224 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.9E-35 1.1E-39 328.7 22.0 262 607-885 5-341 (343)
225 KOG0669 Cyclin T-dependent kin 100.0 9.5E-38 2.1E-42 306.9 -0.2 294 609-926 17-323 (376)
226 KOG0199 ACK and related non-re 100.0 6.9E-36 1.5E-40 329.5 14.4 253 610-880 111-369 (1039)
227 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-34 2.7E-39 318.6 24.2 200 609-821 20-220 (296)
228 KOG4717 Serine/threonine prote 100.0 6E-36 1.3E-40 319.4 13.0 256 609-926 18-278 (864)
229 cd05088 PTKc_Tie2 Catalytic do 100.0 5.9E-35 1.3E-39 322.4 21.6 257 608-885 6-282 (303)
230 cd05050 PTKc_Musk Catalytic do 100.0 6.3E-35 1.4E-39 319.7 21.5 257 607-881 3-287 (288)
231 KOG0577 Serine/threonine prote 100.0 3.2E-36 7E-41 326.2 11.0 243 611-879 28-278 (948)
232 cd06658 STKc_PAK5 Catalytic do 100.0 2.6E-35 5.7E-40 323.3 18.4 258 611-928 24-282 (292)
233 cd06637 STKc_TNIK Catalytic do 100.0 7.5E-35 1.6E-39 316.1 21.6 203 607-820 4-219 (272)
234 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.2E-34 4.8E-39 322.4 25.6 265 604-886 7-296 (334)
235 KOG0604 MAP kinase-activated p 100.0 3.7E-36 8E-41 303.0 9.7 260 608-925 60-329 (400)
236 cd07837 STKc_CdkB_plant Cataly 100.0 7.5E-35 1.6E-39 320.2 21.0 281 609-922 1-295 (295)
237 cd05056 PTKc_FAK Catalytic dom 100.0 1.5E-34 3.3E-39 313.5 23.1 257 608-885 5-267 (270)
238 cd05097 PTKc_DDR_like Catalyti 100.0 1.3E-34 2.9E-39 318.3 23.0 261 608-881 4-294 (295)
239 cd08223 STKc_Nek4 Catalytic do 100.0 1.9E-34 4.1E-39 310.1 23.5 201 610-820 1-205 (257)
240 cd08218 STKc_Nek1 Catalytic do 100.0 1.2E-34 2.6E-39 311.5 22.0 201 610-820 1-204 (256)
241 cd05109 PTKc_HER2 Catalytic do 100.0 1.7E-34 3.7E-39 314.7 23.5 258 608-885 6-270 (279)
242 PHA03390 pk1 serine/threonine- 100.0 6.3E-35 1.4E-39 316.0 19.9 254 603-923 8-267 (267)
243 cd05040 PTKc_Ack_like Catalyti 100.0 1.9E-34 4.2E-39 310.1 23.5 250 615-881 1-256 (257)
244 cd05065 PTKc_EphR_B Catalytic 100.0 1.3E-34 2.8E-39 313.8 22.2 259 609-883 4-268 (269)
245 cd07835 STKc_CDK1_like Catalyt 100.0 1.3E-34 2.8E-39 316.3 22.2 278 611-921 1-283 (283)
246 cd05060 PTKc_Syk_like Catalyti 100.0 1.9E-34 4.2E-39 310.3 23.3 249 615-883 1-255 (257)
247 cd05058 PTKc_Met_Ron Catalytic 100.0 2.6E-34 5.7E-39 310.0 24.4 254 615-885 1-261 (262)
248 cd06631 STKc_YSK4 Catalytic do 100.0 2.6E-34 5.6E-39 310.7 24.3 206 610-821 1-212 (265)
249 cd05577 STKc_GRK Catalytic dom 100.0 4.7E-35 1E-39 318.9 18.4 193 617-820 1-197 (277)
250 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.4E-34 5.2E-39 311.3 23.8 206 610-821 1-216 (267)
251 cd06624 STKc_ASK Catalytic dom 100.0 3E-34 6.5E-39 310.8 24.4 205 604-819 3-213 (268)
252 cd05051 PTKc_DDR Catalytic dom 100.0 2.3E-34 4.9E-39 316.5 23.8 262 608-881 4-295 (296)
253 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.4E-34 3.1E-39 316.2 22.0 267 609-883 4-283 (284)
254 cd08221 STKc_Nek9 Catalytic do 100.0 2E-34 4.3E-39 309.9 22.7 249 610-878 1-252 (256)
255 KOG0574 STE20-like serine/thre 100.0 1.1E-36 2.3E-41 305.8 4.7 247 610-879 34-283 (502)
256 KOG4279 Serine/threonine prote 100.0 1.7E-35 3.8E-40 325.2 14.5 244 615-878 581-831 (1226)
257 cd05095 PTKc_DDR2 Catalytic do 100.0 2.5E-34 5.3E-39 316.4 23.5 263 608-881 4-295 (296)
258 cd05112 PTKc_Itk Catalytic dom 100.0 2E-34 4.4E-39 309.8 22.3 251 609-880 4-255 (256)
259 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.3E-35 1.4E-39 315.5 18.4 263 609-921 1-267 (267)
260 cd05047 PTKc_Tie Catalytic dom 100.0 2.6E-34 5.6E-39 311.8 23.2 249 615-884 1-269 (270)
261 cd07864 STKc_CDK12 Catalytic d 100.0 8.6E-35 1.9E-39 320.9 19.5 276 606-921 4-302 (302)
262 cd00192 PTKc Catalytic domain 100.0 2.7E-34 5.9E-39 309.1 22.8 248 615-880 1-261 (262)
263 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.2E-34 4.8E-39 310.9 22.1 239 615-880 1-261 (262)
264 cd06643 STKc_SLK Catalytic dom 100.0 2.7E-34 5.9E-39 313.6 22.8 200 610-820 6-211 (282)
265 cd05578 STKc_Yank1 Catalytic d 100.0 4.2E-35 9E-40 315.6 16.0 252 610-921 1-258 (258)
266 cd06630 STKc_MEKK1 Catalytic d 100.0 2.9E-34 6.3E-39 310.7 22.7 260 610-922 1-268 (268)
267 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-34 2.6E-39 324.8 20.1 289 608-927 4-301 (336)
268 cd07840 STKc_CDK9_like Catalyt 100.0 8.9E-35 1.9E-39 317.9 18.5 280 611-921 1-287 (287)
269 cd07836 STKc_Pho85 Catalytic d 100.0 2.5E-34 5.4E-39 314.1 21.9 280 610-921 1-284 (284)
270 cd06659 STKc_PAK6 Catalytic do 100.0 9.9E-35 2.2E-39 319.6 18.8 258 614-931 26-284 (297)
271 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.9E-34 1.1E-38 309.4 24.0 253 615-881 1-268 (269)
272 cd07833 STKc_CDKL Catalytic do 100.0 7.5E-35 1.6E-39 318.8 17.6 279 609-921 1-288 (288)
273 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.5E-35 1.8E-39 317.6 18.0 259 609-926 1-269 (283)
274 cd05609 STKc_MAST Catalytic do 100.0 3.6E-34 7.8E-39 316.5 22.8 207 609-820 1-219 (305)
275 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.3E-34 7.2E-39 313.6 22.2 200 609-820 1-210 (286)
276 cd06609 STKc_MST3_like Catalyt 100.0 3.1E-34 6.6E-39 311.8 21.7 199 609-820 1-201 (274)
277 cd05633 STKc_GRK3 Catalytic do 100.0 1.4E-34 3E-39 315.5 19.0 256 616-933 1-270 (279)
278 cd05057 PTKc_EGFR_like Catalyt 100.0 6.1E-34 1.3E-38 310.4 24.1 258 608-885 6-270 (279)
279 cd06645 STKc_MAP4K3 Catalytic 100.0 2.3E-34 4.9E-39 311.5 20.5 201 608-820 8-212 (267)
280 PLN00009 cyclin-dependent kina 100.0 1.5E-34 3.3E-39 317.7 19.4 283 609-923 2-289 (294)
281 cd06656 STKc_PAK3 Catalytic do 100.0 4E-34 8.7E-39 314.8 22.8 262 608-929 18-280 (297)
282 cd06644 STKc_STK10_LOK Catalyt 100.0 8E-34 1.7E-38 311.6 25.0 202 608-820 11-218 (292)
283 cd05041 PTKc_Fes_like Catalyti 100.0 6.1E-34 1.3E-38 305.1 23.4 248 615-881 1-250 (251)
284 cd07865 STKc_CDK9 Catalytic do 100.0 1.9E-34 4.1E-39 319.2 20.1 288 608-921 11-310 (310)
285 cd05083 PTKc_Chk Catalytic dom 100.0 2.8E-34 6.2E-39 308.4 20.8 246 609-881 6-252 (254)
286 cd06613 STKc_MAP4K3_like Catal 100.0 7.7E-34 1.7E-38 306.2 24.2 203 608-821 2-208 (262)
287 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.7E-34 5.8E-39 314.6 20.9 264 609-926 1-274 (287)
288 KOG0579 Ste20-like serine/thre 100.0 1.5E-35 3.2E-40 322.5 10.7 260 609-926 32-297 (1187)
289 cd05042 PTKc_Aatyk Catalytic d 100.0 7.2E-34 1.6E-38 308.0 23.7 251 616-880 2-267 (269)
290 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.4E-34 5.2E-39 312.7 20.0 238 616-880 2-273 (274)
291 cd06612 STKc_MST1_2 Catalytic 100.0 6.1E-34 1.3E-38 305.8 22.9 200 608-820 2-202 (256)
292 PTZ00266 NIMA-related protein 100.0 2.6E-34 5.6E-39 345.3 22.1 259 602-878 6-294 (1021)
293 cd06611 STKc_SLK_like Catalyti 100.0 3.6E-34 7.7E-39 312.4 21.2 202 608-820 4-211 (280)
294 cd08220 STKc_Nek8 Catalytic do 100.0 5.2E-34 1.1E-38 306.4 22.1 200 610-820 1-204 (256)
295 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.3E-34 7.2E-39 313.3 20.9 266 608-924 4-272 (284)
296 cd05044 PTKc_c-ros Catalytic d 100.0 3.7E-34 8.1E-39 310.1 21.0 249 615-881 1-268 (269)
297 cd06651 STKc_MEKK3 Catalytic d 100.0 1E-33 2.2E-38 306.3 24.1 203 609-820 2-212 (266)
298 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.7E-34 7.9E-39 311.8 20.7 247 610-879 5-253 (277)
299 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.3E-34 2.9E-39 311.8 17.0 239 615-880 1-257 (258)
300 cd05046 PTK_CCK4 Pseudokinase 100.0 7.4E-34 1.6E-38 308.9 22.9 254 609-881 5-274 (275)
301 cd06640 STKc_MST4 Catalytic do 100.0 9.7E-34 2.1E-38 308.5 23.9 247 609-878 4-252 (277)
302 KOG4236 Serine/threonine prote 100.0 7.2E-36 1.6E-40 319.5 6.8 252 614-925 569-826 (888)
303 cd06648 STKc_PAK_II Catalytic 100.0 6.1E-34 1.3E-38 311.4 21.9 255 611-925 21-276 (285)
304 cd06638 STKc_myosinIIIA Cataly 100.0 5.7E-34 1.2E-38 311.7 21.6 212 599-821 8-233 (286)
305 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.1E-34 1.5E-38 310.3 22.3 210 600-820 7-229 (282)
306 cd07866 STKc_BUR1 Catalytic do 100.0 2.4E-34 5.2E-39 318.6 18.6 288 608-921 7-311 (311)
307 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.6E-34 1E-38 311.8 20.5 267 609-883 4-283 (284)
308 cd07854 STKc_MAPK4_6 Catalytic 100.0 3E-34 6.6E-39 322.3 19.4 284 608-923 4-305 (342)
309 cd08216 PK_STRAD Pseudokinase 100.0 6.6E-34 1.4E-38 315.7 21.9 291 614-925 7-302 (314)
310 KOG1290 Serine/threonine prote 100.0 9.6E-35 2.1E-39 310.5 14.3 132 608-743 77-221 (590)
311 smart00219 TyrKc Tyrosine kina 100.0 1.2E-33 2.5E-38 303.8 22.7 250 611-879 1-257 (258)
312 cd06652 STKc_MEKK2 Catalytic d 100.0 2.4E-33 5.2E-38 303.2 25.2 203 609-820 2-212 (265)
313 cd08226 PK_STRAD_beta Pseudoki 100.0 2.3E-34 5E-39 321.4 17.6 204 615-821 4-214 (328)
314 KOG0596 Dual specificity; seri 100.0 1.2E-34 2.6E-39 313.9 14.6 203 608-821 360-576 (677)
315 cd07855 STKc_ERK5 Catalytic do 100.0 3.5E-34 7.6E-39 320.8 18.6 290 608-926 4-302 (334)
316 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.9E-34 1.3E-38 320.2 20.4 283 602-924 10-306 (345)
317 cd07879 STKc_p38delta_MAPK13 C 100.0 3.6E-34 7.7E-39 321.7 18.5 281 608-926 14-305 (342)
318 KOG0612 Rho-associated, coiled 100.0 3E-35 6.5E-40 341.5 9.5 268 601-926 67-346 (1317)
319 cd06632 STKc_MEKK1_plant Catal 100.0 2.1E-33 4.4E-38 302.0 23.1 199 610-821 1-206 (258)
320 cd07831 STKc_MOK Catalytic dom 100.0 6E-34 1.3E-38 310.7 19.1 276 611-921 1-282 (282)
321 cd05572 STKc_cGK_PKG Catalytic 100.0 5.5E-34 1.2E-38 307.6 18.4 192 617-821 1-196 (262)
322 cd06639 STKc_myosinIIIB Cataly 100.0 1.8E-33 3.9E-38 308.6 22.8 264 601-922 14-291 (291)
323 cd06605 PKc_MAPKK Catalytic do 100.0 1.4E-33 3E-38 304.9 21.4 199 609-820 1-202 (265)
324 cd06626 STKc_MEKK4 Catalytic d 100.0 1.9E-33 4.2E-38 303.4 22.6 203 610-820 1-209 (264)
325 PTZ00024 cyclin-dependent prot 100.0 1.2E-33 2.6E-38 316.7 21.3 293 608-928 7-323 (335)
326 cd07834 STKc_MAPK Catalytic do 100.0 4.9E-34 1.1E-38 319.1 18.1 289 610-928 1-299 (330)
327 cd08217 STKc_Nek2 Catalytic do 100.0 2.7E-33 5.9E-38 302.1 23.1 202 610-821 1-214 (265)
328 cd08528 STKc_Nek10 Catalytic d 100.0 2.8E-33 6.1E-38 303.3 23.2 251 610-881 1-268 (269)
329 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.2E-33 4.9E-38 304.7 22.2 255 611-883 1-272 (273)
330 cd05118 STKc_CMGC Catalytic do 100.0 9.2E-34 2E-38 309.3 19.2 278 611-921 1-283 (283)
331 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.6E-33 7.7E-38 302.5 23.6 251 616-880 2-266 (268)
332 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.3E-33 4.9E-38 302.0 22.0 237 615-880 1-258 (259)
333 cd05579 STKc_MAST_like Catalyt 100.0 7.5E-34 1.6E-38 306.4 18.1 254 617-923 1-262 (265)
334 cd06608 STKc_myosinIII_like Ca 100.0 2.8E-33 6.2E-38 303.8 22.4 203 607-820 4-221 (275)
335 cd08225 STKc_Nek5 Catalytic do 100.0 1.6E-33 3.4E-38 302.8 20.2 200 610-819 1-204 (257)
336 cd05613 STKc_MSK1_N N-terminal 100.0 1.3E-33 2.8E-38 309.6 19.8 199 610-819 1-210 (290)
337 cd05581 STKc_PDK1 Catalytic do 100.0 8E-34 1.7E-38 309.1 17.8 258 609-921 1-280 (280)
338 cd06623 PKc_MAPKK_plant_like C 100.0 4.4E-33 9.5E-38 300.5 23.4 201 609-821 1-204 (264)
339 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.8E-33 1E-37 302.0 23.2 202 610-821 2-216 (272)
340 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.8E-34 1.9E-38 317.9 17.6 283 608-927 4-300 (337)
341 cd06647 STKc_PAK_I Catalytic d 100.0 4.6E-33 9.9E-38 305.8 22.8 200 609-821 19-219 (293)
342 KOG4645 MAPKKK (MAP kinase kin 100.0 4.2E-35 9.1E-40 344.4 6.9 254 608-878 1234-1493(1509)
343 cd07838 STKc_CDK4_6_like Catal 100.0 5.2E-33 1.1E-37 304.0 23.0 276 611-921 1-287 (287)
344 cd05606 STKc_beta_ARK Catalyti 100.0 1.9E-33 4.2E-38 306.3 19.2 251 616-927 1-264 (278)
345 cd06641 STKc_MST3 Catalytic do 100.0 7.5E-33 1.6E-37 301.5 23.8 246 610-878 5-252 (277)
346 cd07829 STKc_CDK_like Catalyti 100.0 6.7E-34 1.5E-38 310.2 15.3 278 611-921 1-282 (282)
347 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.8E-33 6E-38 314.5 20.6 281 607-924 13-304 (343)
348 cd07830 STKc_MAK_like Catalyti 100.0 3.4E-33 7.3E-38 305.0 20.3 279 611-921 1-283 (283)
349 KOG0983 Mitogen-activated prot 100.0 5.4E-34 1.2E-38 283.8 12.6 248 611-879 94-349 (391)
350 cd06917 STKc_NAK1_like Catalyt 100.0 6.9E-33 1.5E-37 301.6 22.6 198 610-820 2-205 (277)
351 cd06657 STKc_PAK4 Catalytic do 100.0 2.3E-33 5E-38 307.9 18.8 253 614-926 25-278 (292)
352 cd07851 STKc_p38 Catalytic dom 100.0 1.5E-33 3.2E-38 316.9 17.6 281 607-925 13-305 (343)
353 cd05583 STKc_MSK_N N-terminal 100.0 2.2E-33 4.8E-38 307.5 18.5 199 610-819 1-210 (288)
354 cd07852 STKc_MAPK15 Catalytic 100.0 3.1E-33 6.6E-38 313.6 20.0 288 607-924 5-301 (337)
355 cd05611 STKc_Rim15_like Cataly 100.0 5.2E-33 1.1E-37 299.6 19.7 248 615-924 2-257 (260)
356 cd06614 STKc_PAK Catalytic dom 100.0 1.5E-32 3.2E-37 300.6 23.6 203 607-821 17-220 (286)
357 cd06607 STKc_TAO Catalytic dom 100.0 1.8E-32 3.8E-37 303.3 24.1 245 608-878 14-266 (307)
358 PHA02882 putative serine/threo 100.0 1.8E-32 3.8E-37 301.2 23.4 264 608-880 11-293 (294)
359 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.7E-33 1.2E-37 309.9 19.6 286 603-925 4-295 (328)
360 KOG0696 Serine/threonine prote 100.0 9.6E-34 2.1E-38 295.5 12.2 277 608-941 348-629 (683)
361 cd06616 PKc_MKK4 Catalytic dom 100.0 8.1E-33 1.8E-37 303.0 20.1 199 610-820 5-213 (288)
362 KOG0664 Nemo-like MAPK-related 100.0 3.6E-35 7.7E-40 291.5 1.2 283 613-923 57-348 (449)
363 cd05122 PKc_STE Catalytic doma 100.0 2.5E-32 5.4E-37 291.9 23.3 199 610-820 1-200 (253)
364 cd08215 STKc_Nek Catalytic dom 100.0 1.4E-32 3.1E-37 295.0 21.4 201 610-820 1-206 (258)
365 cd06606 STKc_MAPKKK Catalytic 100.0 3.9E-32 8.4E-37 291.7 24.2 202 610-821 1-207 (260)
366 cd07857 STKc_MPK1 Catalytic do 100.0 1.2E-32 2.6E-37 308.1 21.1 281 610-922 1-296 (332)
367 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.4E-32 7.3E-37 294.1 23.5 203 609-820 2-212 (264)
368 cd08530 STKc_CNK2-like Catalyt 100.0 2.7E-32 5.8E-37 293.0 22.1 246 610-877 1-251 (256)
369 KOG1006 Mitogen-activated prot 100.0 1.9E-34 4.2E-39 286.1 4.8 246 614-879 69-327 (361)
370 KOG1151 Tousled-like protein k 100.0 2.3E-34 5E-39 302.2 5.5 276 603-925 457-748 (775)
371 cd06627 STKc_Cdc7_like Catalyt 100.0 4.2E-32 9.1E-37 291.0 22.9 200 610-821 1-203 (254)
372 KOG0586 Serine/threonine prote 100.0 2.7E-33 5.8E-38 309.6 13.4 262 608-932 55-320 (596)
373 cd06635 STKc_TAO1 Catalytic do 100.0 8.9E-32 1.9E-36 299.0 25.1 245 611-881 27-279 (317)
374 cd06618 PKc_MKK7 Catalytic dom 100.0 4.3E-32 9.4E-37 298.5 22.3 199 608-819 14-220 (296)
375 KOG0200 Fibroblast/platelet-de 100.0 2.4E-32 5.2E-37 325.6 21.8 264 603-884 290-580 (609)
376 KOG0668 Casein kinase II, alph 100.0 1.4E-33 3E-38 274.0 9.0 280 607-925 36-329 (338)
377 cd05610 STKc_MASTL Catalytic d 100.0 2.3E-32 4.9E-37 330.9 21.6 145 609-758 4-152 (669)
378 KOG0665 Jun-N-terminal kinase 100.0 2E-33 4.3E-38 286.8 10.2 282 608-922 16-314 (369)
379 PLN03224 probable serine/threo 100.0 1.7E-32 3.8E-37 315.3 19.2 271 607-923 143-505 (507)
380 KOG0603 Ribosomal protein S6 k 100.0 3.5E-33 7.7E-38 310.3 12.8 247 608-925 321-571 (612)
381 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-32 4E-37 293.2 17.8 192 617-820 1-196 (250)
382 KOG1024 Receptor-like protein 100.0 2.3E-32 5E-37 284.2 15.9 268 601-886 276-558 (563)
383 cd08222 STKc_Nek11 Catalytic d 100.0 8.7E-32 1.9E-36 290.1 21.0 199 610-819 1-207 (260)
384 cd05576 STKc_RPK118_like Catal 100.0 4.2E-32 9E-37 288.5 18.1 179 620-818 4-183 (237)
385 PLN03225 Serine/threonine-prot 100.0 2.5E-32 5.4E-37 322.4 16.2 277 607-926 130-458 (566)
386 KOG1035 eIF-2alpha kinase GCN2 100.0 2.7E-32 5.9E-37 319.5 16.2 206 607-819 477-817 (1351)
387 KOG4250 TANK binding protein k 100.0 3.6E-32 7.9E-37 304.2 15.3 200 611-821 15-228 (732)
388 cd06633 STKc_TAO3 Catalytic do 100.0 5.1E-31 1.1E-35 292.3 24.5 195 611-821 23-224 (313)
389 cd06634 STKc_TAO2 Catalytic do 100.0 2.7E-31 5.8E-36 294.0 21.8 196 609-820 15-217 (308)
390 KOG0587 Traf2- and Nck-interac 100.0 6.8E-32 1.5E-36 307.2 16.4 286 601-910 11-310 (953)
391 KOG0614 cGMP-dependent protein 100.0 8.2E-33 1.8E-37 295.8 5.1 202 609-823 420-625 (732)
392 KOG0695 Serine/threonine prote 100.0 1.1E-31 2.4E-36 273.3 12.9 202 605-818 246-452 (593)
393 KOG0670 U4/U6-associated splic 100.0 2.1E-32 4.5E-37 293.4 3.4 301 596-923 419-751 (752)
394 KOG1167 Serine/threonine prote 100.0 2.1E-31 4.6E-36 282.5 10.4 296 603-923 30-386 (418)
395 KOG0984 Mitogen-activated prot 100.0 1.1E-30 2.4E-35 250.6 12.3 215 604-829 41-264 (282)
396 KOG1027 Serine/threonine prote 100.0 1.2E-31 2.7E-36 303.8 4.9 255 611-926 511-775 (903)
397 KOG0608 Warts/lats-like serine 100.0 2.7E-30 5.8E-35 282.3 13.7 209 609-822 629-876 (1034)
398 PLN00113 leucine-rich repeat r 100.0 1.9E-29 4E-34 322.0 20.3 324 32-370 26-369 (968)
399 KOG4194 Membrane glycoprotein 100.0 1.7E-31 3.7E-36 290.0 0.1 292 81-382 124-464 (873)
400 smart00220 S_TKc Serine/Threon 100.0 1.2E-28 2.6E-33 261.5 21.8 186 621-819 1-188 (244)
401 KOG4194 Membrane glycoprotein 99.9 2.8E-28 6.2E-33 265.1 8.2 295 60-368 47-352 (873)
402 KOG1152 Signal transduction se 99.9 5.7E-28 1.2E-32 262.8 10.1 196 609-818 561-770 (772)
403 KOG0576 Mitogen-activated prot 99.9 1.1E-28 2.4E-33 272.7 3.8 253 608-878 14-270 (829)
404 cd00180 PKc Catalytic domain o 99.9 1.2E-25 2.5E-30 232.5 21.9 210 617-879 1-214 (215)
405 smart00221 STYKc Protein kinas 99.9 1.6E-25 3.5E-30 234.9 21.2 199 611-819 1-202 (225)
406 KOG0444 Cytoskeletal regulator 99.9 3.8E-28 8.3E-33 264.8 -3.9 276 81-369 77-374 (1255)
407 KOG1345 Serine/threonine kinas 99.9 8.5E-26 1.8E-30 225.4 10.6 251 607-882 22-287 (378)
408 KOG4237 Extracellular matrix p 99.9 9.9E-27 2.1E-31 243.4 -0.4 309 60-380 38-369 (498)
409 KOG0472 Leucine-rich repeat pr 99.9 1.1E-26 2.4E-31 243.0 -3.3 278 81-370 136-541 (565)
410 KOG0444 Cytoskeletal regulator 99.9 1.3E-26 2.7E-31 253.0 -3.2 278 82-371 7-305 (1255)
411 KOG0472 Leucine-rich repeat pr 99.9 3.7E-27 8.1E-32 246.5 -9.1 263 84-370 47-310 (565)
412 PLN00181 protein SPA1-RELATED; 99.9 1.3E-24 2.7E-29 270.1 9.9 153 661-818 28-216 (793)
413 KOG1164 Casein kinase (serine/ 99.9 1.5E-22 3.3E-27 224.6 23.5 267 610-886 19-300 (322)
414 KOG0195 Integrin-linked kinase 99.9 8.1E-24 1.8E-28 210.8 7.8 247 614-883 195-446 (448)
415 KOG1165 Casein kinase (serine/ 99.9 2.3E-22 5.1E-27 206.4 18.3 268 609-892 28-308 (449)
416 KOG1163 Casein kinase (serine/ 99.9 1.6E-22 3.5E-27 198.9 16.3 271 607-888 13-289 (341)
417 smart00750 KIND kinase non-cat 99.9 1.3E-22 2.8E-27 204.9 16.1 168 690-884 1-170 (176)
418 PRK09188 serine/threonine prot 99.9 1.4E-22 3E-27 224.0 15.8 171 606-792 15-195 (365)
419 KOG0590 Checkpoint kinase and 99.9 4.4E-23 9.4E-28 242.8 2.1 262 613-924 322-591 (601)
420 PRK15387 E3 ubiquitin-protein 99.8 8E-21 1.7E-25 226.0 16.8 237 83-372 223-460 (788)
421 PRK15370 E3 ubiquitin-protein 99.8 4.5E-21 9.8E-26 229.8 13.9 246 83-371 179-429 (754)
422 COG0515 SPS1 Serine/threonine 99.8 1.9E-19 4.2E-24 199.3 25.1 258 611-879 2-275 (384)
423 cd05147 RIO1_euk RIO kinase fa 99.8 8.9E-20 1.9E-24 185.6 12.2 139 614-760 2-167 (190)
424 PRK10359 lipopolysaccharide co 99.8 4.9E-20 1.1E-24 189.3 8.9 171 607-811 29-216 (232)
425 KOG0618 Serine/threonine phosp 99.8 3.4E-21 7.3E-26 221.3 -2.0 264 83-369 220-488 (1081)
426 PLN03210 Resistant to P. syrin 99.8 1.4E-18 3.1E-23 222.6 20.4 276 80-366 556-878 (1153)
427 PRK12274 serine/threonine prot 99.8 7.2E-19 1.6E-23 176.6 13.7 191 612-819 5-209 (218)
428 KOG0603 Ribosomal protein S6 k 99.8 2.3E-20 5E-25 208.6 2.7 222 617-871 2-230 (612)
429 cd05145 RIO1_like RIO kinase f 99.8 1.1E-18 2.3E-23 178.4 14.6 140 614-761 2-168 (190)
430 PRK15387 E3 ubiquitin-protein 99.8 1.3E-18 2.8E-23 207.3 15.1 224 77-350 237-460 (788)
431 KOG1240 Protein kinase contain 99.8 1.8E-19 4E-24 210.0 6.8 253 610-880 24-292 (1431)
432 PRK15370 E3 ubiquitin-protein 99.8 9.6E-19 2.1E-23 209.9 12.6 232 81-349 198-429 (754)
433 KOG1166 Mitotic checkpoint ser 99.8 2.8E-18 6.1E-23 205.3 15.6 253 603-885 692-955 (974)
434 KOG0617 Ras suppressor protein 99.8 9.7E-21 2.1E-25 177.0 -4.4 167 126-329 29-195 (264)
435 KOG4158 BRPK/PTEN-induced prot 99.8 2.4E-18 5.3E-23 180.6 12.0 201 663-881 274-512 (598)
436 KOG0617 Ras suppressor protein 99.8 1E-20 2.2E-25 176.9 -5.2 166 102-273 29-195 (264)
437 KOG1023 Natriuretic peptide re 99.8 1.4E-18 3E-23 195.1 10.7 216 659-885 1-226 (484)
438 PLN03210 Resistant to P. syrin 99.8 2.1E-17 4.5E-22 212.0 21.2 262 82-368 611-904 (1153)
439 PRK10345 hypothetical protein; 99.7 2.5E-17 5.4E-22 169.2 14.5 136 612-757 5-156 (210)
440 KOG0618 Serine/threonine phosp 99.7 9.6E-20 2.1E-24 209.5 -3.7 252 80-351 239-492 (1081)
441 PF14531 Kinase-like: Kinase-l 99.7 3.6E-17 7.7E-22 173.3 16.0 230 612-870 15-288 (288)
442 cd00116 LRR_RI Leucine-rich re 99.7 1.3E-19 2.8E-24 201.5 -4.2 279 86-369 2-319 (319)
443 KOG4237 Extracellular matrix p 99.7 2.7E-19 5.9E-24 187.9 -2.3 286 67-374 38-339 (498)
444 KOG0606 Microtubule-associated 99.7 2.8E-18 6.1E-23 200.5 5.5 172 608-821 82-262 (1205)
445 cd00116 LRR_RI Leucine-rich re 99.7 4.9E-19 1.1E-23 196.9 -3.0 263 83-347 24-319 (319)
446 PRK14879 serine/threonine prot 99.7 2.1E-16 4.6E-21 164.6 13.5 134 615-759 2-143 (211)
447 cd05144 RIO2_C RIO kinase fami 99.7 3.5E-16 7.6E-21 161.1 13.5 143 603-760 9-175 (198)
448 smart00090 RIO RIO-like kinase 99.7 2.8E-16 6.2E-21 165.4 13.0 142 610-760 29-198 (237)
449 TIGR03724 arch_bud32 Kae1-asso 99.7 4E-16 8.7E-21 160.9 12.7 130 616-759 1-138 (199)
450 PLN03150 hypothetical protein; 99.7 3.7E-16 8.1E-21 187.2 13.0 144 29-176 366-512 (623)
451 PRK09605 bifunctional UGMP fam 99.6 6E-16 1.3E-20 183.6 13.2 143 602-759 326-476 (535)
452 KOG1033 eIF-2alpha kinase PEK/ 99.6 1.6E-16 3.4E-21 174.8 4.2 128 678-812 329-457 (516)
453 cd05120 APH_ChoK_like Aminogly 99.6 1E-14 2.3E-19 142.5 11.8 135 613-759 2-138 (155)
454 cd05119 RIO RIO kinase family, 99.6 1.3E-14 2.8E-19 148.1 12.5 136 614-761 2-165 (187)
455 KOG0590 Checkpoint kinase and 99.5 1.4E-15 3.1E-20 179.5 0.7 263 608-923 19-291 (601)
456 PRK01723 3-deoxy-D-manno-octul 99.5 1E-13 2.2E-18 146.4 13.9 135 614-759 36-191 (239)
457 KOG0532 Leucine-rich repeat (L 99.5 1.6E-15 3.5E-20 166.5 -3.2 184 128-329 73-256 (722)
458 KOG0532 Leucine-rich repeat (L 99.4 2.7E-14 5.8E-19 157.0 0.1 194 105-316 74-270 (722)
459 TIGR01982 UbiB 2-polyprenylphe 99.4 2E-12 4.3E-17 148.4 12.6 140 614-761 122-308 (437)
460 KOG1266 Protein kinase [Signal 99.3 3.1E-12 6.7E-17 132.3 9.7 154 658-815 120-280 (458)
461 COG4886 Leucine-rich repeat (L 99.3 2.4E-12 5.3E-17 147.6 7.0 200 110-326 97-297 (394)
462 COG4886 Leucine-rich repeat (L 99.3 2E-12 4.2E-17 148.4 6.2 200 87-303 98-298 (394)
463 PLN03150 hypothetical protein; 99.3 2.1E-11 4.6E-16 146.4 13.2 93 227-328 419-512 (623)
464 PRK04750 ubiB putative ubiquin 99.2 1.9E-11 4.2E-16 141.7 10.5 143 609-762 120-316 (537)
465 KOG0601 Cyclin-dependent kinas 99.2 2E-11 4.3E-16 137.8 8.3 251 609-877 114-377 (524)
466 cd05151 ChoK Choline Kinase (C 99.2 4.8E-11 1E-15 119.5 9.7 130 614-758 3-135 (170)
467 KOG1243 Protein kinase [Genera 99.2 3E-10 6.6E-15 129.1 15.3 166 630-813 34-199 (690)
468 KOG1259 Nischarin, modulator o 99.1 1.3E-11 2.9E-16 125.8 1.7 221 82-319 182-412 (490)
469 cd05146 RIO3_euk RIO kinase fa 99.1 4.8E-10 1.1E-14 113.2 12.9 137 614-761 2-175 (197)
470 KOG0606 Microtubule-associated 99.1 1.8E-11 3.9E-16 144.3 2.6 270 607-928 802-1102(1205)
471 KOG1259 Nischarin, modulator o 99.1 1.3E-11 2.9E-16 125.8 0.8 128 201-371 283-413 (490)
472 KOG1909 Ran GTPase-activating 99.1 2.8E-12 6.2E-17 134.2 -4.4 232 83-318 31-310 (382)
473 PF14580 LRR_9: Leucine-rich r 99.1 4.6E-11 9.9E-16 118.2 3.7 125 129-258 18-147 (175)
474 KOG1909 Ran GTPase-activating 99.1 2.8E-12 6.1E-17 134.2 -5.2 256 100-369 24-310 (382)
475 KOG0601 Cyclin-dependent kinas 99.1 1E-10 2.2E-15 132.1 6.3 246 604-878 260-513 (524)
476 KOG0531 Protein phosphatase 1, 99.1 1E-11 2.3E-16 142.7 -1.9 242 103-369 69-317 (414)
477 KOG3207 Beta-tubulin folding c 99.1 1.7E-11 3.7E-16 131.7 -0.2 215 102-319 117-339 (505)
478 KOG3207 Beta-tubulin folding c 99.1 2.2E-11 4.7E-16 130.8 0.1 210 127-350 118-341 (505)
479 KOG3087 Serine/threonine prote 99.1 1.7E-09 3.8E-14 104.2 13.0 143 613-759 11-165 (229)
480 cd05154 ACAD10_11_like Acyl-Co 99.0 1.4E-09 3E-14 114.0 12.5 142 615-759 4-206 (223)
481 PF14580 LRR_9: Leucine-rich r 99.0 1E-10 2.2E-15 115.7 2.9 126 102-233 15-147 (175)
482 COG3642 Mn2+-dependent serine/ 99.0 2.5E-09 5.3E-14 104.0 12.1 131 615-759 2-140 (204)
483 KOG0531 Protein phosphatase 1, 98.9 9.2E-11 2E-15 134.9 -1.8 240 106-369 49-289 (414)
484 KOG3741 Poly(A) ribonuclease s 98.9 7.9E-08 1.7E-12 106.2 20.0 167 622-815 289-474 (655)
485 KOG1859 Leucine-rich repeat pr 98.8 8.6E-11 1.9E-15 132.7 -6.3 181 147-374 102-296 (1096)
486 PRK15123 lipopolysaccharide co 98.8 6E-08 1.3E-12 103.7 14.3 140 616-759 29-194 (268)
487 PF01163 RIO1: RIO1 family; I 98.8 3.3E-08 7.1E-13 99.6 11.1 125 624-760 1-156 (188)
488 KOG4658 Apoptotic ATPase [Sign 98.8 1.7E-08 3.6E-13 124.1 9.3 178 83-265 546-731 (889)
489 PF13855 LRR_8: Leucine rich r 98.7 5.4E-09 1.2E-13 85.1 3.3 59 131-189 2-60 (61)
490 PF13855 LRR_8: Leucine rich r 98.7 1.1E-08 2.4E-13 83.2 3.5 61 154-214 1-61 (61)
491 COG0478 RIO-like serine/threon 98.6 3.4E-07 7.4E-12 94.5 10.7 136 611-760 93-252 (304)
492 COG4248 Uncharacterized protei 98.5 2.4E-06 5.2E-11 92.3 16.2 260 613-888 15-305 (637)
493 KOG2137 Protein kinase [Signal 98.5 4.6E-08 9.9E-13 112.2 1.9 184 715-912 107-293 (700)
494 KOG1859 Leucine-rich repeat pr 98.5 6.1E-09 1.3E-13 118.1 -5.6 126 155-295 165-292 (1096)
495 KOG4658 Apoptotic ATPase [Sign 98.5 7.9E-08 1.7E-12 118.2 3.3 104 107-211 546-651 (889)
496 PRK09902 hypothetical protein; 98.4 2E-06 4.4E-11 87.1 12.7 137 618-759 27-179 (216)
497 COG5238 RNA1 Ran GTPase-activa 98.4 1.6E-08 3.5E-13 102.5 -2.9 172 175-348 89-285 (388)
498 PF06293 Kdo: Lipopolysacchari 98.4 1.6E-06 3.4E-11 89.7 11.3 106 649-759 55-170 (206)
499 KOG4579 Leucine-rich repeat (L 98.3 4.9E-08 1.1E-12 89.3 -2.8 133 84-220 29-164 (177)
500 COG0661 AarF Predicted unusual 98.3 3.4E-06 7.4E-11 97.6 10.8 141 615-762 131-317 (517)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.6e-73 Score=723.11 Aligned_cols=259 Identities=27% Similarity=0.452 Sum_probs=208.3
Q ss_pred hcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
...|...+.||+|+||.||+|+. .+++.||||+++.... ...+|++.+++++||||++++|+|.+.+..++||||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 34577888999999999999997 4789999999875332 223568899999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++|+|.++++. ++|..+.+|+.|+++||+|||+.+.++|+||||||+||+++.++.+++. ||.+.....
T Consensus 765 ~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---- 834 (968)
T PLN00113 765 IEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---- 834 (968)
T ss_pred CCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence 999999999952 7899999999999999999997655669999999999999999988875 665543211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC----chhHHHHHHHHhhccchhhhcC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG----KNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~----~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
.....+|..|+|||++.+..++.++|||||||++|||+||+.||... ....+|.+..+........+++
T Consensus 835 -------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (968)
T PLN00113 835 -------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDP 907 (968)
T ss_pred -------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCc
Confidence 11235788999999999999999999999999999999999998532 2344555443333333333343
Q ss_pred CCC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002289 843 NMG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887 (941)
Q Consensus 843 ~~~---~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 887 (941)
... ..+.+...++.+++.+||+.+|++||+|.++++.|+++.+..
T Consensus 908 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred cccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 321 244566778899999999999999999999999999876543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-49 Score=438.19 Aligned_cols=284 Identities=52% Similarity=0.884 Sum_probs=248.0
Q ss_pred CccccchHHHHHHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeecc
Q 002289 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 674 (941)
Q Consensus 595 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 674 (941)
....|+|.++..+|++|...+.||+|+||.||+|..++|+.||||++........++|.+|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999988765443145699999999999999999999999
Q ss_pred ccCC-cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEee
Q 002289 675 DEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 753 (941)
Q Consensus 675 ~~~~-~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~D 753 (941)
.+.+ +.+||||||++|||.++|+.....+++|..|++||.++|+||+|||+...++||||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 599999999999999999875543789999999999999999999999999999999999999999999999999
Q ss_pred eccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC-----chhHHHHH
Q 002289 754 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG-----KNIVREVN 828 (941)
Q Consensus 754 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~-----~~~~~~~~ 828 (941)
||+|+..+... .+......||.+|+|||++..+..+.|+||||||++++|++||+.+.+.. .++.+|..
T Consensus 221 FGLa~~~~~~~------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 221 FGLAKLGPEGD------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred ccCcccCCccc------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 99997543200 11111117999999999999999999999999999999999999888742 34788887
Q ss_pred HHHhhccchhhhcCCCC--CCCh-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 829 IAYQSSMMFSVIDGNMG--SYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 829 ~~~~~~~~~~~~~~~~~--~~~~-~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
.......+.+++|+.+. .++. +....+..++..|++.+|..||+|.+|+++|+.+.
T Consensus 295 ~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 295 PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 77777788899998874 4554 68888999999999999999999999999986654
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-47 Score=397.98 Aligned_cols=260 Identities=26% Similarity=0.433 Sum_probs=208.4
Q ss_pred HhcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchh-------hHhHHHHHHHHHhcCCCceeeeeeccccCC
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG-------EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 678 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 678 (941)
..+.|.+.+.||+|+||.|-+|.. ++|+.||||+++...... ...+.+|+++|++++|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 346678899999999999999995 479999999987532211 234579999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC---CcEEEeeec
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFG 755 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~---~~~kl~DFG 755 (941)
..|+|||||+||+|.+.+-.++ .+.+...+.++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999999986654 3777788899999999999999999 9999999999999766 789999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccCC---CCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHh
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 832 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~ 832 (941)
+|+.... ...+...+||+.|.|||++.+.. +..++|+||+||+||-+++|..||.......
T Consensus 325 lAK~~g~--------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-------- 388 (475)
T KOG0615|consen 325 LAKVSGE--------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-------- 388 (475)
T ss_pred hhhcccc--------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--------
Confidence 9997642 34567789999999999998754 3347899999999999999999997543211
Q ss_pred hccch-hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC
Q 002289 833 SSMMF-SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 911 (941)
Q Consensus 833 ~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s 911 (941)
.+. ++..+.....|. .+. +.+.++.+||++||++||++|+|
T Consensus 389 --sl~eQI~~G~y~f~p~-~w~-----------------------------------~Iseea~dlI~~mL~VdP~~R~s 430 (475)
T KOG0615|consen 389 --SLKEQILKGRYAFGPL-QWD-----------------------------------RISEEALDLINWMLVVDPENRPS 430 (475)
T ss_pred --cHHHHHhcCcccccCh-hhh-----------------------------------hhhHHHHHHHHHhhEeCcccCcC
Confidence 011 112222211111 111 12234458999999999999999
Q ss_pred CccCCCCCCCCCCC
Q 002289 912 SSSMLKHPYVSSDV 925 (941)
Q Consensus 912 a~e~L~Hpwf~~~~ 925 (941)
+.|||+||||....
T Consensus 431 ~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 431 ADEALNHPWFKDAP 444 (475)
T ss_pred HHHHhcChhhhccc
Confidence 99999999998543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-46 Score=389.13 Aligned_cols=195 Identities=31% Similarity=0.454 Sum_probs=174.3
Q ss_pred CccceeeccCcEEEEEEEeC-CCcEEEEEEeccC-CchhhHhHHHHHHHHHhcCCCceeeeeeccccCC-cEEEEEecCC
Q 002289 612 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFMS 688 (941)
Q Consensus 612 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~LV~e~~~ 688 (941)
+..+.||+|..|+|||++++ +++.+|+|++... .....+++.+|++++++.+||+||++||.|..++ +..++||||+
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 34678999999999999976 6899999999543 3334678999999999999999999999999888 5999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
+|||++++... +.+++...-+|+.+|++||.|||+ ++ ||||||||+|||++..|+|||+|||.+..+...
T Consensus 162 gGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---- 232 (364)
T KOG0581|consen 162 GGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---- 232 (364)
T ss_pred CCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh----
Confidence 99999999765 348999999999999999999996 66 999999999999999999999999999876432
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
......||..|||||.+.+..|+.++||||||++++|+.+|+.||...
T Consensus 233 -----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 233 -----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred -----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 335567999999999999999999999999999999999999999754
No 5
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.4e-46 Score=371.67 Aligned_cols=280 Identities=26% Similarity=0.461 Sum_probs=222.1
Q ss_pred cCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchh--hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|...++||+|.||.||+|++ ++|+.||||+++.....+ .....+|++.|+.++|+||+.++++|...+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688889999999999999995 479999999998654332 3568999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
||+ -+|+..++.+ ...++...++.++.++++|++|||++. |+||||||.|+|++++|.+||+|||+|+.+..++
T Consensus 82 fm~-tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~- 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN- 155 (318)
T ss_pred ecc-ccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC-
Confidence 996 5999999654 456899999999999999999999999 9999999999999999999999999999886543
Q ss_pred CCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
+..+..+-|.+|+|||.+.| ..|+..+|+||.||++.||+-| .||..+.+..+++...+.. +
T Consensus 156 ------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr-~P~fpG~sDidQL~~If~~----------L 218 (318)
T KOG0659|consen 156 ------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR-VPFFPGDSDIDQLSKIFRA----------L 218 (318)
T ss_pred ------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc-CCCCCCCchHHHHHHHHHH----------c
Confidence 22333367889999999987 5699999999999999999988 5666666656655544421 2
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH-HhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE-SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~-~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
+...++.+.++..+ |++.++.+.-. .....++....++.||+.+|+++||.+|+||+|+|+||||++
T Consensus 219 GTP~~~~WP~~~~l------------pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSL------------PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred CCCCcccCcccccc------------ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 22222222222221 22222211000 011145666677799999999999999999999999999986
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-45 Score=401.08 Aligned_cols=260 Identities=38% Similarity=0.584 Sum_probs=221.4
Q ss_pred CccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh--hHhHHHHHHHHHhcCCCceeeeeeccccCC-cEEEEEecCC
Q 002289 612 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFMS 688 (941)
Q Consensus 612 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~LV~e~~~ 688 (941)
...+.||+|+||+||+|.++....||||++....... .+.|.+|+.+|++++|||||+|+|+|.+.. ..++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3455699999999999999655559999998654333 458999999999999999999999998887 7999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-cEEEeeeccccccCCCCCCC
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-~~kl~DFGla~~~~~~~~~~ 767 (941)
+|+|.++++......+++..++.++.|||+||+|||+++. ||||||||+|||++.++ ++||+|||+++......
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--- 198 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc---
Confidence 9999999987555679999999999999999999999874 99999999999999998 99999999998654321
Q ss_pred ccccccccccccCCCcccccccc--cCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... .+.... -+..+.++
T Consensus 199 ----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~--------v~~~~~Rp 265 (362)
T KOG0192|consen 199 ----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASA--------VVVGGLRP 265 (362)
T ss_pred ----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHH--------HHhcCCCC
Confidence 2233467999999999999 56999999999999999999999999987665 221111 12345566
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 889 (941)
.+|..++..+..++..||+.+|..||++.+++..|+.+......
T Consensus 266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 77888999999999999999999999999999999988775554
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-45 Score=406.57 Aligned_cols=252 Identities=25% Similarity=0.443 Sum_probs=214.0
Q ss_pred cCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
.+|...+.||+|||+.||.+++ ++|..||+|++..... ...+.+.+||++.++++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5788999999999999999997 7899999999876433 23467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
|+|++++|.+++++ +.++++.+++.+..||+.||.|||+++ |+|||||..|+++++++++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD- 171 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc-
Confidence 99999999999963 456999999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......+||+.|.|||++....++..+||||+||++|.|+.|++||+...- .+
T Consensus 172 ------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-ke------------------- 225 (592)
T KOG0575|consen 172 ------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-KE------------------- 225 (592)
T ss_pred ------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-HH-------------------
Confidence 2345678899999999999999999999999999999999999999964321 00
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
.+. |+...--.+|+ ....++.|||++||+.||.+|||++++|.|+||+
T Consensus 226 ----------ty~----~Ik~~~Y~~P~----------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 226 ----------TYN----KIKLNEYSMPS----------------HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred ----------HHH----HHHhcCccccc----------------ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 111 11111111222 2345567899999999999999999999999993
No 8
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-46 Score=394.65 Aligned_cols=287 Identities=22% Similarity=0.345 Sum_probs=230.1
Q ss_pred HhcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchh-hHhHHHHHHHHHhcC-CCceeeeeeccccCC-cEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG-EQML 682 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~-~~~L 682 (941)
..++|...++||.|.||.||+|+. .+|..||||+++..-... +-.-++|++.|++++ ||||+++.+.+.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 457889999999999999999995 478999999988643333 233479999999998 999999999998887 9999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||| ..+|+++++++ ...|++..++.|+.||++||+|+|++| +.|||+||+|||+.....+||+|||+||....
T Consensus 88 VfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 88 VFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc
Confidence 99999 56999999877 678999999999999999999999999 99999999999999999999999999997643
Q ss_pred CCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
....+..+.|.+|+|||++.. +-|+.+.|+||+|||++|+.+-+..|.+ .+..+++.... ++
T Consensus 163 --------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG-~sE~Dqi~KIc------~V-- 225 (538)
T KOG0661|consen 163 --------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPG-ASEIDQIYKIC------EV-- 225 (538)
T ss_pred --------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCC-CcHHHHHHHHH------HH--
Confidence 234567788999999999865 7799999999999999999998766654 44444433322 11
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
++....+.+.+-.+++..+--.-|..-|+- +...++....++.++|.+|+.|||++||||+|+|+||||
T Consensus 226 --LGtP~~~~~~eg~~La~~mnf~~P~~~~~~---------l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pff 294 (538)
T KOG0661|consen 226 --LGTPDKDSWPEGYNLASAMNFRFPQVKPSP---------LKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFF 294 (538)
T ss_pred --hCCCccccchhHHHHHHHhccCCCcCCCCC---------hHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence 222223333333566666554555544432 223345577788899999999999999999999999999
Q ss_pred CCCCC
Q 002289 922 SSDVS 926 (941)
Q Consensus 922 ~~~~~ 926 (941)
+....
T Consensus 295 q~~~~ 299 (538)
T KOG0661|consen 295 QVGRA 299 (538)
T ss_pred ccccc
Confidence 77655
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-45 Score=382.45 Aligned_cols=272 Identities=23% Similarity=0.367 Sum_probs=225.6
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
..++|++.++||+|+||.||.++.+ +++.+|+|++++.... ..+...+|..+|.+++||.||+++..|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 4567999999999999999999965 6899999999865433 24567899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
|+||+.||.|..+|++++. +++..++.++..|+.||.|||+.+ ||||||||+|||+|.+|+++|+|||+++....
T Consensus 103 Vld~~~GGeLf~hL~~eg~--F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR--FSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEeccCCccHHHHHHhcCC--cchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 9999999999999976654 899999999999999999999999 99999999999999999999999999985432
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
. ...+...+||+.|||||++.+..|+..+|+||+|+++|||++|..||..... .+..+
T Consensus 178 ~-------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-~~~~~-------------- 235 (357)
T KOG0598|consen 178 D-------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-KKMYD-------------- 235 (357)
T ss_pred C-------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-HHHHH--------------
Confidence 2 2234457899999999999999999999999999999999999999975432 11111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC-CCCCCcccccccCCCCCCCCC----CCccCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPP----SSSSMLK 917 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~-~~~~~~dll~~~L~~dP~~R~----sa~e~L~ 917 (941)
-+..+ .+ ...+. .+..+.|+++++|+.||++|. .++++-.
T Consensus 236 ---------------~I~~~------k~--------------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 236 ---------------KILKG------KL--------------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred ---------------HHhcC------cC--------------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 00000 00 11122 455667899999999999995 6888999
Q ss_pred CCCCCCCCCCCccccccccccCC
Q 002289 918 HPYVSSDVSGSNLVSGVIPTITP 940 (941)
Q Consensus 918 Hpwf~~~~~~~~~~~~~~~~~~~ 940 (941)
||||....+..-+...+.|++.|
T Consensus 281 HpfF~~inW~~l~~k~l~PpF~P 303 (357)
T KOG0598|consen 281 HPFFKGINWEKLLAKKLSPPFKP 303 (357)
T ss_pred CcccccCCHHHHHhcCCCCCeec
Confidence 99999988877777777777776
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=399.98 Aligned_cols=264 Identities=30% Similarity=0.500 Sum_probs=224.3
Q ss_pred HHHHHHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 602 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
+.++...+.+...+.||+|.||.||.|.++....||+|.++..... .+.|.+|+++|++++|+|||+++|+|..++.++
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy 277 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY 277 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence 3444445555667899999999999999988889999999876433 458999999999999999999999999988999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
||||||+.|+|.++|+...+..+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+|||+|+...
T Consensus 278 IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccC
Confidence 9999999999999998866778999999999999999999999999 9999999999999999999999999999543
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
..... ......-...|.|||++..+.++.|||||||||+||||+| |+.||....+.. .+..+-
T Consensus 355 d~~Y~------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e----------v~~~le 418 (468)
T KOG0197|consen 355 DDEYT------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE----------VLELLE 418 (468)
T ss_pred CCcee------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH----------HHHHHh
Confidence 33221 1122223568999999999999999999999999999999 888887554321 122334
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
.+.+.+-|+.|+..++++|..||+.+|++|||+..+...++++..
T Consensus 419 ~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 419 RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 456667889999999999999999999999999999988887754
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-44 Score=377.78 Aligned_cols=270 Identities=24% Similarity=0.399 Sum_probs=213.0
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC--CchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
.++|...+.||+|+||+||+|+++ ++..||||.+... .....+.+..|+++|+.++|||||.+++++..++..||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 467888889999999999999975 6899999998765 3444567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC------CcEEEeeecccc
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK------FTAKVADFGLSR 758 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~------~~~kl~DFGla~ 758 (941)
|||.||+|.+++++++ .+++..++.++.|+|.||++||+++ ||||||||+|||++.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999998765 4899999999999999999999999 9999999999999764 569999999999
Q ss_pred ccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchh
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 838 (941)
.+.. .......+|++.|||||++..++|+.|+|+||+|+++|++++|+.||...... +... .++.
T Consensus 164 ~L~~--------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~-eL~~-~~~k----- 228 (429)
T KOG0595|consen 164 FLQP--------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK-ELLL-YIKK----- 228 (429)
T ss_pred hCCc--------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH-HHHH-HHhc-----
Confidence 8763 23345678999999999999999999999999999999999999999754321 1111 0000
Q ss_pred hhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 839 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
-....+.++........++...-+..++.+|-.+.+ .|...++.-+|.+|+.+.++=.+
T Consensus 229 -~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~--------------------~~~~~~l~~~p~~~~~~~~~~~~ 287 (429)
T KOG0595|consen 229 -GNEIVPVLPAELSNPLRELLISLLQRNPKDRISFED--------------------FFDHPFLAANPQDRADAFELESR 287 (429)
T ss_pred -cccccCchhhhccCchhhhhhHHHhcCccccCchHH--------------------hhhhhhcccCcccccCccccccc
Confidence 001112234444445556666666667766665543 34555666667666666554433
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.5e-45 Score=369.83 Aligned_cols=281 Identities=24% Similarity=0.349 Sum_probs=217.9
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|+...++|+|+||+|||++.+ +|+.||||++..... .-.+-.++|+++|++++|+|+|.++.+|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999976 699999999976432 224567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
||+. ++.+-+++.. ..++...+.+++.|+++|+.|+|+++ +|||||||+|||++.++.+||+|||.|+.+..+
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-- 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP-- 154 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC--
Confidence 9976 5555555443 34888999999999999999999999 999999999999999999999999999987532
Q ss_pred CCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
....+..+.|.+|+|||.+.+ .+|+.++||||+||++.||++|...|....+..+...+.. .+
T Consensus 155 -----gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~k-----------tL 218 (396)
T KOG0593|consen 155 -----GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRK-----------TL 218 (396)
T ss_pred -----cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHH-----------HH
Confidence 344566778999999999998 7899999999999999999999877766555443322211 11
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCC----CCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDA----RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 920 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~----RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpw 920 (941)
+...+. -+++. ..+|-- -|.. +..+.+...++.......||+..+|..||++|++.+|+|.|||
T Consensus 219 G~L~pr----hq~iF----~~N~~F~Gv~lP~~----~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~y 286 (396)
T KOG0593|consen 219 GNLIPR----HQSIF----SSNPFFHGVRLPEP----EHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPY 286 (396)
T ss_pred cccCHH----HHHHh----ccCCceeeeecCCC----CCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChH
Confidence 111111 11111 111110 0111 1122333455666667789999999999999999999999999
Q ss_pred CCCC
Q 002289 921 VSSD 924 (941)
Q Consensus 921 f~~~ 924 (941)
|++-
T Consensus 287 Fd~~ 290 (396)
T KOG0593|consen 287 FDGF 290 (396)
T ss_pred HHHH
Confidence 9553
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-45 Score=390.36 Aligned_cols=285 Identities=25% Similarity=0.371 Sum_probs=219.7
Q ss_pred hcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccC--CcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~L 682 (941)
.+.|+.+++||+|.||.||+|+. .+|+.||+|++..+.. .......+||.+|++++||||+++.+...+. +.+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 34567788999999999999995 5799999999876543 3345678999999999999999999998665 68999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
|+|||++ +|.-++.. ..-.|++.+++.++.|++.||+|||+++ |+|||||.+|||+|.+|.+||+|||+|+++..
T Consensus 196 VFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999975 88888854 3446999999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
.. ....+..+-|.+|+|||++.| ..|+.++|+||.||||.||++|+..|... ..++++...+.
T Consensus 271 ~~------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~-tEveQl~kIfk--------- 334 (560)
T KOG0600|consen 271 SG------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR-TEVEQLHKIFK--------- 334 (560)
T ss_pred CC------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc-cHHHHHHHHHH---------
Confidence 33 233566778999999999998 57999999999999999999998777544 44444444332
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
..+...++++. ..++- .+...-| ..++.. .+.+ .+...++.+.+|+..||.+||.+|.||.++|+|+||
T Consensus 335 -lcGSP~e~~W~-~~kLP-~~~~~kp--~~~y~r---~l~E---~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 335 -LCGSPTEDYWP-VSKLP-HATIFKP--QQPYKR---RLRE---TFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred -HhCCCChhccc-cccCC-cccccCC--CCcccc---hHHH---HhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 12333444443 22221 1111111 111111 1111 234456677899999999999999999999999999
Q ss_pred CCC
Q 002289 922 SSD 924 (941)
Q Consensus 922 ~~~ 924 (941)
+.+
T Consensus 404 ~t~ 406 (560)
T KOG0600|consen 404 TTE 406 (560)
T ss_pred ccC
Confidence 543
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-44 Score=358.82 Aligned_cols=257 Identities=27% Similarity=0.448 Sum_probs=214.0
Q ss_pred cCCCccceeeccCcEEEEEEE-eCCCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeee-ccccCCc-EEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVG-YCDEEGE-QMLV 683 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~-~~LV 683 (941)
.+|++.++||+|.||+||++. ..+|..||.|.++-+... ..++...|+.+|++++|||||++++ .+.++.+ .+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 457778899999999999999 468999999998854443 3467899999999999999999999 4555554 8999
Q ss_pred EecCCCCCHHHHHhh--cCCCCccHHHHHHHHHHHHHHHHHhhcCCC-CCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 684 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEAD-PPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
||||.+|+|..+++. +.+..+++..+|+++.|++.||.++|+.-. ..|+||||||.||+++.+|.+||+|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999974 455679999999999999999999998321 23899999999999999999999999999987
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
... .......+||+.||+||.+.+.+|+.+|||||+||++|||+.-+.||... ++..... ++.
T Consensus 179 ~s~-------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~---------KI~ 241 (375)
T KOG0591|consen 179 SSK-------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCK---------KIE 241 (375)
T ss_pred cch-------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHH---------HHH
Confidence 543 23456678999999999999999999999999999999999999999865 3332221 233
Q ss_pred cCCCCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 841 DGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 841 ~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
.+..++.| +.++..+.+++..|+..||+.||+.-.+++.+..
T Consensus 242 qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 242 QGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 44556666 7889999999999999999999996555555443
No 15
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-43 Score=368.13 Aligned_cols=286 Identities=23% Similarity=0.366 Sum_probs=225.1
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEecc--CCchhhHhHHHHHHHHHhcCCCceeeeeecccc-----CC
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EG 678 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~ 678 (941)
...+|...+.||+|+||.|+.|... +|+.||||++.. ......++..+|+++++.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4456666789999999999999965 789999999873 344456788999999999999999999999855 35
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
..|+|+|+| +-+|...++.+ +.++...+..+..|+++||.|+|+.+ |+||||||+|++++.+..+||+|||+|+
T Consensus 100 DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence 789999999 67999999654 34899999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
..... ......+....|.+|+|||.+.. ..|+.+.||||.||++.||++|+..|.+.+ ...++...
T Consensus 174 ~~~~~-----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d-~v~Ql~lI------- 240 (359)
T KOG0660|consen 174 YLDKF-----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD-YVHQLQLI------- 240 (359)
T ss_pred ecccc-----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc-hHHHHHHH-------
Confidence 77532 11344577788999999999865 789999999999999999999987775444 34433322
Q ss_pred hhhcCCCCCCChHHHHHHH-HHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCC
Q 002289 838 SVIDGNMGSYPSECVEKFI-KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 916 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~-~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 916 (941)
-...+..+++....+. +-+..-++..|...+. .+.+.++..++.+.||+.+||++||.+|+||+|||
T Consensus 241 ---~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~---------~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 241 ---LELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQ---------PFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred ---HHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCC---------CHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence 1223444444444332 1122233333332221 23345688899999999999999999999999999
Q ss_pred CCCCCCC
Q 002289 917 KHPYVSS 923 (941)
Q Consensus 917 ~Hpwf~~ 923 (941)
+||||..
T Consensus 309 ~hPYl~~ 315 (359)
T KOG0660|consen 309 AHPYLAP 315 (359)
T ss_pred cChhhhh
Confidence 9999965
No 16
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.5e-43 Score=358.98 Aligned_cols=283 Identities=24% Similarity=0.340 Sum_probs=213.9
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh--hHhHHHHHHHHHhcCCCceeeeeeccc--cCCcEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQMLV 683 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~LV 683 (941)
+.|+.+++|++|.||.||+|+++ +++.||+|+++...... .-..++||.+|.+++|||||.+..+.. .-+.+|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45777899999999999999975 68999999998643211 234689999999999999999988864 34679999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
||||+. +|..+++.-. +++...+++.++.|+++|++|||.+. |+|||||++|+|+++.|.+||+|||+|+.+..+
T Consensus 156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999965 9999997654 67999999999999999999999999 999999999999999999999999999988654
Q ss_pred CCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
....+..+-|.+|+|||.+.+ ..|+.+.|+||+|||+.||++++..|.... ..+++...+..
T Consensus 231 -------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s-E~dQl~~If~l--------- 293 (419)
T KOG0663|consen 231 -------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS-EIDQLDKIFKL--------- 293 (419)
T ss_pred -------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc-hHHHHHHHHHH---------
Confidence 234566778999999999998 469999999999999999999977665444 44444443321
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC--CCCCCcccccccCCCCCCCCCCCccCCCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE--SDTKTPEFINSEHTSKEETPPSSSSMLKHPY 920 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~--~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpw 920 (941)
++...+..++.+..+-. ++ -..+|... ...|+ ..++. ......+|++.+|++||++|+||+|+|+|+|
T Consensus 294 -lGtPte~iwpg~~~lp~--~k--~~~f~~~p--yn~lr---~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 294 -LGTPSEAIWPGYSELPA--VK--KMTFSEHP--YNNLR---KKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred -hCCCccccCCCccccch--hh--ccccCCCC--chhhh---hhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 11111111111111100 00 00111110 11122 22333 2366789999999999999999999999999
Q ss_pred CCC
Q 002289 921 VSS 923 (941)
Q Consensus 921 f~~ 923 (941)
|..
T Consensus 364 F~e 366 (419)
T KOG0663|consen 364 FRE 366 (419)
T ss_pred ccc
Confidence 987
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-43 Score=377.83 Aligned_cols=266 Identities=22% Similarity=0.318 Sum_probs=217.1
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---hHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~L 682 (941)
..+|...+.||.|+|++|++|+.. +++.||||++.+.-... .+.+..|-.+|.+| .||.|++|+..|.++..+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 456778899999999999999964 68999999987643322 35678899999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
|+||+++|+|.++|++.+ .|++...+.++.+|+.||+|||++| ||||||||+|||+|++|++||+|||.|+.+..
T Consensus 152 vLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999998765 4999999999999999999999999 99999999999999999999999999998865
Q ss_pred CCCCC------ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccc
Q 002289 763 PDIEG------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 763 ~~~~~------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
..... ..........+||..|.+||++.....+..+|+|+|||++|+|+.|+.||....+..-
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli----------- 295 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI----------- 295 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH-----------
Confidence 43220 0111112557899999999999999999999999999999999999999976543211
Q ss_pred hhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCC
Q 002289 837 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 916 (941)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 916 (941)
+.+++..-.. ..+.-.+.+.||++++|..||.+|+|++|+.
T Consensus 296 ------------------FqkI~~l~y~---------------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk 336 (604)
T KOG0592|consen 296 ------------------FQKIQALDYE---------------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIK 336 (604)
T ss_pred ------------------HHHHHHhccc---------------------CCCCCCHHHHHHHHHHHccCccccccHHHHh
Confidence 1111111111 1112223445788889999999999999999
Q ss_pred CCCCCCCCCCCC
Q 002289 917 KHPYVSSDVSGS 928 (941)
Q Consensus 917 ~Hpwf~~~~~~~ 928 (941)
+||||.+..+..
T Consensus 337 ~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 337 AHPFFEGVDWEN 348 (604)
T ss_pred hCcccccCChhh
Confidence 999999988765
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-43 Score=351.59 Aligned_cols=268 Identities=22% Similarity=0.347 Sum_probs=219.1
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhh---HhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
-++|+..+.||.|+||+|.+++.+ +|..+|+|+++....-.. +...+|..+|+.+.||+++++++.|.+.+..++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 356778899999999999999965 689999999987554433 4567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||++||-|..++++.+ .+++..++.+|.||+.||+|||+.+ |++|||||+|||+|.+|.+||+|||.|+...
T Consensus 123 meyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~-- 195 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVS-- 195 (355)
T ss_pred EeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEec--
Confidence 99999999999997654 4999999999999999999999999 9999999999999999999999999998763
Q ss_pred CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
..+...+||+.|+|||.+....+..++|.|||||++|||+.|..||...... +... .++.+
T Consensus 196 --------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-~iY~---------KI~~~- 256 (355)
T KOG0616|consen 196 --------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-QIYE---------KILEG- 256 (355)
T ss_pred --------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-HHHH---------HHHhC-
Confidence 2356789999999999999999999999999999999999999999765431 1111 11111
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC-----CCccCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKH 918 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~H 918 (941)
...+| +--++++.||+.++|+.|-.+|. -..++..|
T Consensus 257 ~v~fP---------------------------------------~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H 297 (355)
T KOG0616|consen 257 KVKFP---------------------------------------SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH 297 (355)
T ss_pred cccCC---------------------------------------cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC
Confidence 11122 22334445677777777777773 56789999
Q ss_pred CCCCCCCCCCccccccccccCC
Q 002289 919 PYVSSDVSGSNLVSGVIPTITP 940 (941)
Q Consensus 919 pwf~~~~~~~~~~~~~~~~~~~ 940 (941)
|||.+..+..-+...+.+|+-|
T Consensus 298 ~wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 298 PWFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred cccccccHHHHhhccccCCCCC
Confidence 9999888866666666666544
No 19
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-42 Score=398.15 Aligned_cols=264 Identities=30% Similarity=0.501 Sum_probs=223.9
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCC
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 678 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 678 (941)
....+....+.||+|+||.||+|+.. +...||||.+++.... ..++|++|++++..++|||||+|+|.|.+++
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 34455566789999999999999853 3568999999987666 5789999999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcC------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 746 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~ 746 (941)
.+++|+|||..|||.++|.... +.+++..+.+.||.|||.||+||-++. +|||||..+|+||.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccc
Confidence 9999999999999999997421 234899999999999999999999999 9999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHH
Q 002289 747 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 825 (941)
Q Consensus 747 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~ 825 (941)
..|||+|||+++..-..+++.. .....-.++|||||.|..++++.+||||||||+|||+++ |+.||..-.+..
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~-----~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E- 713 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKV-----RGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE- 713 (774)
T ss_pred eEEEecccccchhhhhhhhhcc-----cCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-
Confidence 9999999999997655554321 112223579999999999999999999999999999999 999998655421
Q ss_pred HHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002289 826 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887 (941)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 887 (941)
.+..+-.+..-+-|+.|+.+++++|..||+..|++||++.||-..|+.+....
T Consensus 714 ---------VIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 714 ---------VIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred ---------HHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 12233345556679999999999999999999999999999999999886543
No 20
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-42 Score=376.92 Aligned_cols=265 Identities=25% Similarity=0.397 Sum_probs=218.6
Q ss_pred hcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
...|....+||+|+.|.||.|.. .+++.||||++........+-+.+|+.+|+..+|+|||++++.|...++.|+||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 35677778999999999999984 57899999999876666667789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
|+||+|.|.+... .+++.++..|++++++||+|||.++ |+|||||.+|||++.+|.+||+|||++..+....
T Consensus 352 m~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~-- 423 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ-- 423 (550)
T ss_pred cCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc--
Confidence 9999999998543 3899999999999999999999999 9999999999999999999999999998764321
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......||+.|||||++....|++++||||||++++||+-|..||..+..+...+. +.....
T Consensus 424 -----~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyL----------Ia~ng~-- 486 (550)
T KOG0578|consen 424 -----SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL----------IATNGT-- 486 (550)
T ss_pred -----CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHH----------HhhcCC--
Confidence 245667899999999999999999999999999999999999999986544322111 111111
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCCC
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~ 926 (941)
|... ......+.+.|||++||+.|+++|++|+|+|+||||.....
T Consensus 487 ------------------------P~lk-----------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p 531 (550)
T KOG0578|consen 487 ------------------------PKLK-----------NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKP 531 (550)
T ss_pred ------------------------CCcC-----------CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCC
Confidence 1100 11122344558999999999999999999999999966555
Q ss_pred CCcccc
Q 002289 927 GSNLVS 932 (941)
Q Consensus 927 ~~~~~~ 932 (941)
.+.+.+
T Consensus 532 ~ssL~p 537 (550)
T KOG0578|consen 532 ESSLNP 537 (550)
T ss_pred HHHhHH
Confidence 555443
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-41 Score=360.99 Aligned_cols=274 Identities=26% Similarity=0.331 Sum_probs=217.5
Q ss_pred HhcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchh-hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
..+.|++.+.||.|..++||+|+. +.+..||||++..+.... .+.+.+|+..|+.++||||++++..|..+...|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 346788999999999999999994 578999999998655444 478899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
.||.+||+.+++...-...+++..+..|.+++++||.|||++| .||||||+.|||++++|.|||+|||.+..+....
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 9999999999998877777999999999999999999999999 9999999999999999999999999986654322
Q ss_pred CCCccccccccccccCCCccccccccc--CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
...........||+.|||||+++. ..|+.|+||||||++..|+.+|+.||..-....-
T Consensus 181 ---~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv----------------- 240 (516)
T KOG0582|consen 181 ---DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV----------------- 240 (516)
T ss_pred ---ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-----------------
Confidence 111112256789999999999654 5799999999999999999999999964332110
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCC----CCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETD----ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~----~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
...-++-+|- .....++. ......+.+++..||+.||++||||+++|+|
T Consensus 241 ----------------Ll~tLqn~pp~~~t~~~~~d~~-----------k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 241 ----------------LLLTLQNDPPTLLTSGLDKDED-----------KKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred ----------------HHHHhcCCCCCcccccCChHHh-----------hhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 0011111110 00011110 0111244578888999999999999999999
Q ss_pred CCCCCCCCCCcc
Q 002289 919 PYVSSDVSGSNL 930 (941)
Q Consensus 919 pwf~~~~~~~~~ 930 (941)
+||+......-+
T Consensus 294 ~FFk~~k~~~~~ 305 (516)
T KOG0582|consen 294 AFFKKAKSKEYL 305 (516)
T ss_pred HHHhhccchhhc
Confidence 999887664333
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.1e-41 Score=367.69 Aligned_cols=256 Identities=27% Similarity=0.434 Sum_probs=213.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+... ...+.+.+|++++++++||||+.++++|+...+.|+|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57889999999999999999965 689999998865322 224568999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+.| +|..++...+ .++++.+..|+.+++.||.|||+.+ |+|||+||.|||++..+.+|++|||+|+....
T Consensus 82 ~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMST--- 152 (808)
T ss_pred hhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhccc---
Confidence 9965 9999997654 4899999999999999999999999 99999999999999999999999999997643
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.....+.+.||+.|||||+..+++|+..+|.||+||++||+++|++||..
T Consensus 153 ----~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-------------------------- 202 (808)
T KOG0597|consen 153 ----NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-------------------------- 202 (808)
T ss_pred ----CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH--------------------------
Confidence 24556778899999999999999999999999999999999999999952
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~ 925 (941)
..+.++++.... ||-.-|+ .....+..|+..+|..||..|+|=.+++.|||..+..
T Consensus 203 -------~si~~Lv~~I~~-d~v~~p~----------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 203 -------RSITQLVKSILK-DPVKPPS----------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred -------HHHHHHHHHHhc-CCCCCcc----------------cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 223333333322 2222222 1223344678888899999999999999999987766
Q ss_pred CC
Q 002289 926 SG 927 (941)
Q Consensus 926 ~~ 927 (941)
.+
T Consensus 259 ~~ 260 (808)
T KOG0597|consen 259 NI 260 (808)
T ss_pred hh
Confidence 64
No 23
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=362.18 Aligned_cols=203 Identities=31% Similarity=0.498 Sum_probs=173.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCC--cEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~LV~e 685 (941)
.++...+.||+|+||+||++... +|...|||.....+....+.+.+|+.+|++++|||||+++|...... .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45666889999999999999975 49999999887653333556899999999999999999999854444 6899999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEEEeeeccccccCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-~~~~kl~DFGla~~~~~~~ 764 (941)
|+++|+|.+++.+.+. .+++..++.++.||++||+|||+++ ||||||||+|||++. ++.+||+|||++.......
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999988776 7999999999999999999999999 999999999999999 7999999999998664310
Q ss_pred CCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
..........||+.|||||++..+ ....++||||+||++.||+||+.||..
T Consensus 173 ----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 173 ----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred ----ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 112334457799999999999963 334599999999999999999999964
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-41 Score=368.70 Aligned_cols=267 Identities=25% Similarity=0.463 Sum_probs=220.5
Q ss_pred chHHHHHHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh--hHhHHHHHHHHHhcCCCceeeeeeccccC
Q 002289 600 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEE 677 (941)
Q Consensus 600 ~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 677 (941)
+.++|++..+.+.+.+.||+|.||+||+|.|.. .||||+++...... .+.|+.|+.++++-+|.||+-|+|||...
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 346777777788889999999999999999964 69999998655443 57899999999999999999999999988
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
.. .||+.+|+|-+|+.++|-.. ..|+..+.+.||.||++||.|||.++ |||||||..||++.++++|||+|||++
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccce
Confidence 77 99999999999999998654 56999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCccccccccc---CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 834 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~ 834 (941)
..-..- ..........|...|||||+++. .+|++.+|||||||++|||+||..||. ..+.. .
T Consensus 536 tvk~~w-----~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~d---------q 600 (678)
T KOG0193|consen 536 TVKTRW-----SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRD---------Q 600 (678)
T ss_pred eeeeee-----ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChh---------h
Confidence 753221 11223334457889999999975 468999999999999999999999997 33211 1
Q ss_pred cchhhhcCCC----CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002289 835 MMFSVIDGNM----GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 888 (941)
Q Consensus 835 ~~~~~~~~~~----~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 888 (941)
.++.+-.+.. -.....++.++.+++..||..++++||.+.+++..|+.+....|
T Consensus 601 IifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~p 658 (678)
T KOG0193|consen 601 IIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLP 658 (678)
T ss_pred eEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccc
Confidence 2222222211 12446788899999999999999999999999998888766444
No 25
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6.4e-41 Score=363.68 Aligned_cols=269 Identities=22% Similarity=0.304 Sum_probs=214.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
..++|+++..||+|+||.||+|+-+ +|..+|+|++++..... .+.++.|-.+|....+|.||+++-.|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4678999999999999999999965 69999999998765443 3457889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||++||++..+|.+. ..+++..++.++.+++.|++-+|+.| +|||||||+|+|||..|++||+|||++.-+..
T Consensus 219 iMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999999654 45899999999999999999999999 99999999999999999999999999853321
Q ss_pred CCC---------------C---Cccc-----c-----------------ccccccccCCCcccccccccCCCCchhHhHH
Q 002289 763 PDI---------------E---GIVP-----A-----------------HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYS 802 (941)
Q Consensus 763 ~~~---------------~---~~~~-----~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS 802 (941)
... + ...+ . ......+|||.|||||++.+..|+..+|+||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 000 0 0000 0 0012357999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 803 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 803 lG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
+|||+|||+.|.+||........+.++... ..||..-.+.+.+
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nw---------------------------r~~l~fP~~~~~s---------- 416 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNW---------------------------RETLKFPEEVDLS---------- 416 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHH---------------------------hhhccCCCcCccc----------
Confidence 999999999999999765432222111100 1233322222222
Q ss_pred hHhhCCCCCCCCcccccccCCCCCCCCCC---CccCCCCCCCCCCCCC
Q 002289 883 IWNMMPESDTKTPEFINSEHTSKEETPPS---SSSMLKHPYVSSDVSG 927 (941)
Q Consensus 883 ~~~~~~~~~~~~~dll~~~L~~dP~~R~s---a~e~L~Hpwf~~~~~~ 927 (941)
+++.|||.++|. ||++|+- ++|+.+||||++..+.
T Consensus 417 ---------~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~ 454 (550)
T KOG0605|consen 417 ---------DEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWD 454 (550)
T ss_pred ---------HHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcc
Confidence 456689999999 9999984 8999999999997774
No 26
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.3e-41 Score=379.55 Aligned_cols=291 Identities=23% Similarity=0.353 Sum_probs=219.7
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcC-CC-----ceeeeeeccccCCcEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEEGEQML 682 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~~~~~L 682 (941)
+|.+.+.||+|.||.|-+|.+. +++.||||+++... ....+...|+.+|..++ |. |+|++++||...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 8999999999999999999965 69999999998643 33446678999999997 43 89999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC--CCcEEEeeecccccc
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLA 760 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~--~~~~kl~DFGla~~~ 760 (941)
|+|.+ .-+|+++++.+....++...++.|+.||+.||.+||+.+ |||+||||+|||+.+ ...+||+|||.|+..
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 679999999988888999999999999999999999999 999999999999964 348999999999875
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
... ......+..|+|||++.|.+|+.+.||||||||+.||++| .|+..+.+..+++....+.
T Consensus 342 ~q~----------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~PLfpG~ne~DQl~~I~e~------- 403 (586)
T KOG0667|consen 342 SQR----------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EPLFPGDNEYDQLARIIEV------- 403 (586)
T ss_pred CCc----------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcC-ccccCCCCHHHHHHHHHHH-------
Confidence 321 1255678899999999999999999999999999999999 5655666666665543321
Q ss_pred cCCCCCCChHHHHHHH---HH-------HHHhcccCCCCCCCHHHHHHHHHHhHh-------------hCC-CCCCCCcc
Q 002289 841 DGNMGSYPSECVEKFI---KL-------ALKCCQDETDARPSMSEVMRELESIWN-------------MMP-ESDTKTPE 896 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~---~l-------~~~c~~~~p~~RPs~~~v~~~L~~~~~-------------~~~-~~~~~~~d 896 (941)
.+..|....+... +. ...|...+-.+-+...++...+..... ..+ ..+..+.|
T Consensus 404 ---lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d 480 (586)
T KOG0667|consen 404 ---LGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID 480 (586)
T ss_pred ---hCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence 1222222221111 11 111222221111112222222221111 111 23334578
Q ss_pred cccccCCCCCCCCCCCccCCCCCCCCCCCC
Q 002289 897 FINSEHTSKEETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 897 ll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~ 926 (941)
||.+||.|||.+|+|+.|+|+||||++...
T Consensus 481 flk~~L~~dP~~R~tp~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 481 FLKRCLEWDPAERITPAQALNHPFLTGTSL 510 (586)
T ss_pred HHHHHhccCchhcCCHHHHhcCcccccccc
Confidence 999999999999999999999999996544
No 27
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=379.42 Aligned_cols=273 Identities=27% Similarity=0.467 Sum_probs=229.8
Q ss_pred ccccchHHHHHHhcCC---------CccceeeccCcEEEEEEEeC----CCcEEEEEEeccCCchh-hHhHHHHHHHHHh
Q 002289 596 VRSFTYGEMALATNNF---------NSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSR 661 (941)
Q Consensus 596 ~~~~~~~~~~~~~~~y---------~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~ 661 (941)
+..++|+|...+...| .+.++||.|.||.||+|+++ ....||||.++....+. +.+|+.|..||.+
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ 686 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ 686 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc
Confidence 3456777666655444 45789999999999999975 24579999999866554 5689999999999
Q ss_pred cCCCceeeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcE
Q 002289 662 LHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 741 (941)
Q Consensus 662 l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NI 741 (941)
+.||||++|.|+....+..++|+|||++|+|+.+|+.+..+ |++.+...+.++||.||.||-+++ +|||||.++||
T Consensus 687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNI 762 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNI 762 (996)
T ss_pred CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhhe
Confidence 99999999999999999999999999999999999876654 999999999999999999999999 99999999999
Q ss_pred EEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCC
Q 002289 742 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 820 (941)
Q Consensus 742 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~ 820 (941)
|++.+..+||+|||+++.++++... ...+..-.-..+|.|||.+...+++.+|||||||++|||.++ |.+||.+.
T Consensus 763 LVNsnLvCKVsDFGLSRvledd~~~----~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm 838 (996)
T KOG0196|consen 763 LVNSNLVCKVSDFGLSRVLEDDPEA----AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 838 (996)
T ss_pred eeccceEEEeccccceeecccCCCc----cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence 9999999999999999987544311 111122223468999999999999999999999999999888 99999766
Q ss_pred chhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 821 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
.+. +.+..+-++.+.+.|.+|+..+.++|..||++|-.+||++.+++..|.++...
T Consensus 839 SNQ----------dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 839 SNQ----------DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred chH----------HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 542 12234445566778999999999999999999999999999999999987654
No 28
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.9e-41 Score=352.50 Aligned_cols=293 Identities=25% Similarity=0.380 Sum_probs=221.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCc-eeeeeeccccCC-----
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEG----- 678 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~----- 678 (941)
...|...++||+|+||+||+|+.. +|+.||+|++.....+ ......+|+.++++++|+| |+++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345666788999999999999964 7899999998765432 2456789999999999999 999999997766
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCC--CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 002289 679 -EQMLVYEFMSNGTLRDQLSAKSK--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 755 (941)
Q Consensus 679 -~~~LV~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFG 755 (941)
..++||||+ .-+|.+++..... ..++...++.++.||++||+|||+++ |+||||||.|||++++|.+||+|||
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence 788999999 5699999976553 35777889999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhc
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 834 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~ 834 (941)
+|+....+ ....+...+|..|+|||++.+. .|+...||||+||+++||++++..|....+ .++....+.
T Consensus 166 lAra~~ip-------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~-- 235 (323)
T KOG0594|consen 166 LARAFSIP-------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFR-- 235 (323)
T ss_pred hHHHhcCC-------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHH--
Confidence 99965432 3445667789999999999986 799999999999999999998777765554 333333322
Q ss_pred cchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcc
Q 002289 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 914 (941)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 914 (941)
++ +...++.++.+..+.. ++....+++....+. ...+..++...|++.+||+++|++|.||+.
T Consensus 236 ----~l----GtP~e~~Wp~v~~~~~--~k~~f~~~~~~~~l~-------~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~ 298 (323)
T KOG0594|consen 236 ----LL----GTPNEKDWPGVSSLPD--YKAPFPKWPGPKDLS-------SILPKLDPDGIELLSKLLQYDPAKRISAKG 298 (323)
T ss_pred ----Hc----CCCCccCCCCcccccc--ccccCcCCCCccchH-------HhccccCccHHHHHHHHhccCcccCcCHHH
Confidence 11 1111111111111110 000111222222222 233455578889999999999999999999
Q ss_pred CCCCCCCCCCCCCCccc
Q 002289 915 MLKHPYVSSDVSGSNLV 931 (941)
Q Consensus 915 ~L~Hpwf~~~~~~~~~~ 931 (941)
+|.||||.........+
T Consensus 299 al~h~yf~~~~~~~~~~ 315 (323)
T KOG0594|consen 299 ALTHPYFSELPEKSSQL 315 (323)
T ss_pred HhcChhhcccccchhhh
Confidence 99999998865544433
No 29
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=369.67 Aligned_cols=257 Identities=26% Similarity=0.371 Sum_probs=207.9
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC----Cc-hhhHhHHHHHHHHHhcC-CCceeeeeeccccCC
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG----SL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG 678 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~ 678 (941)
...++|.+.+.||+|+||+|+.|... +++.||+|++... .. ...+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34678999999999999999999854 7899999977653 11 23456778999999998 999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-CcEEEeeeccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLS 757 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~-~~~kl~DFGla 757 (941)
..++||||+.||+|.+++... .++.+..+..++.|++.|++|||+++ |+||||||+|||++.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999999773 45888999999999999999999999 9999999999999999 99999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCC-CC-chhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhcc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~ 835 (941)
..... ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||.+..... ...
T Consensus 169 ~~~~~-------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~-l~~------- 233 (370)
T KOG0583|consen 169 AISPG-------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN-LYR------- 233 (370)
T ss_pred cccCC-------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-HHH-------
Confidence 87631 123456678999999999999977 86 67999999999999999999997633211 000
Q ss_pred chhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccC
Q 002289 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 915 (941)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 915 (941)
.+......+|... . .+++.+|+.+||..||.+|+|+.|+
T Consensus 234 ---ki~~~~~~~p~~~------------------------------------~--S~~~~~Li~~mL~~~P~~R~t~~~i 272 (370)
T KOG0583|consen 234 ---KIRKGEFKIPSYL------------------------------------L--SPEARSLIEKMLVPDPSTRITLLEI 272 (370)
T ss_pred ---HHhcCCccCCCCc------------------------------------C--CHHHHHHHHHHcCCCcccCCCHHHH
Confidence 0110000111100 0 4445678888899999999999999
Q ss_pred CCCCCCCC
Q 002289 916 LKHPYVSS 923 (941)
Q Consensus 916 L~Hpwf~~ 923 (941)
+.||||+.
T Consensus 273 ~~h~w~~~ 280 (370)
T KOG0583|consen 273 LEHPWFQK 280 (370)
T ss_pred hhChhhcc
Confidence 99999987
No 30
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.8e-40 Score=361.46 Aligned_cols=201 Identities=27% Similarity=0.421 Sum_probs=174.9
Q ss_pred CCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 610 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
.|+..+.||+|+||+||+|.. .+|+.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367789999999999999996 4789999998865332 223467899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 999999998886655556899999999999999999999999 9999999999999999999999999997643211
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
......||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 205 (285)
T cd05631 157 -------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205 (285)
T ss_pred -------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCC
Confidence 1223468999999999999999999999999999999999999997543
No 31
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.9e-40 Score=360.94 Aligned_cols=281 Identities=23% Similarity=0.345 Sum_probs=208.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|++.++||+|+||+||+|..+ +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56889999999999999999965 689999999875332 2244678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
++ |+|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 96 59999886543 35788999999999999999999999 9999999999999999999999999987543221
Q ss_pred CccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....... ..+
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~----------~~~ 221 (288)
T cd07871 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK-EELHLIFR----------LLG 221 (288)
T ss_pred -----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH----------HhC
Confidence 11223457899999999876 56899999999999999999999999754321 11111110 011
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
..+.+.+..+.......-...|..|+.. .....+..+.+..|||.+||++||.+|+||+|+|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQP---------LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCCc---------hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1112211111100000000011111111 112223455667899999999999999999999999998
No 32
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-42 Score=335.67 Aligned_cols=259 Identities=23% Similarity=0.382 Sum_probs=209.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
.++.|++.+.||+|.|+.||++.. .+|+.+|+|++.... ..+.+++.+|+++-+.++||||+++.+.+.+.+..++|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 356788889999999999999885 479999999876432 23456789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeecccccc
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLA 760 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~---~~~~kl~DFGla~~~ 760 (941)
+|+|+|++|..-+-.+ ..+++..+-.++.||+++|.|+|.++ |||||+||+|+++.+ ..-+||+|||+|..+
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999997765443 45788899999999999999999999 999999999999954 346999999999876
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
.. ....-...||++|||||++...+|+..+|||+.||+||-++.|+.||.+.... + +
T Consensus 164 ~~--------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-r----------l---- 220 (355)
T KOG0033|consen 164 ND--------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-R----------L---- 220 (355)
T ss_pred CC--------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-H----------H----
Confidence 52 22334567999999999999999999999999999999999999999764321 0 0
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCC
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 920 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpw 920 (941)
+.+++..-...++.+ ++...+++.+|+++||+.||.+|+||.|+|+|||
T Consensus 221 --------------ye~I~~g~yd~~~~~-----------------w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 221 --------------YEQIKAGAYDYPSPE-----------------WDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred --------------HHHHhccccCCCCcc-----------------cCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 111111112222222 2334456678999999999999999999999999
Q ss_pred CCCC
Q 002289 921 VSSD 924 (941)
Q Consensus 921 f~~~ 924 (941)
+...
T Consensus 270 i~~r 273 (355)
T KOG0033|consen 270 ICNR 273 (355)
T ss_pred hcch
Confidence 9763
No 33
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6e-40 Score=373.57 Aligned_cols=281 Identities=20% Similarity=0.257 Sum_probs=214.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..+|++.+.||+|+||.||+|.+. +++.||+|.... +.+.+|++++++++||||+++++++...+..++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 457999999999999999999964 689999997542 3567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+ +++|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+......
T Consensus 165 ~-~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-- 236 (391)
T PHA03212 165 Y-KTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-- 236 (391)
T ss_pred C-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc--
Confidence 9 579998886543 4788999999999999999999998 9999999999999999999999999997532211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchh------HHHHHHHHhhccchhhh
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI------VREVNIAYQSSMMFSVI 840 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~------~~~~~~~~~~~~~~~~~ 840 (941)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ ...
T Consensus 237 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~------~~~ 306 (391)
T PHA03212 237 ----ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII------RRS 306 (391)
T ss_pred ----ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH------HHh
Confidence 11223457999999999999999999999999999999999999888643221 11111110 111
Q ss_pred cCCCCCCChH---HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCC
Q 002289 841 DGNMGSYPSE---CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 917 (941)
Q Consensus 841 ~~~~~~~~~~---~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 917 (941)
......++.. .......-...+....|..||....+... ..+..++|.+||.+||++||||+|+|+
T Consensus 307 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 307 GTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYEL-----------PIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhh-----------hhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 1000111111 11222222234455667778776554321 223457999999999999999999999
Q ss_pred CCCCCC
Q 002289 918 HPYVSS 923 (941)
Q Consensus 918 Hpwf~~ 923 (941)
||||..
T Consensus 376 hp~f~~ 381 (391)
T PHA03212 376 FAAFQD 381 (391)
T ss_pred Chhhcc
Confidence 999976
No 34
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-41 Score=350.69 Aligned_cols=275 Identities=22% Similarity=0.330 Sum_probs=203.1
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCC-----cEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQMLV 683 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~LV 683 (941)
.|...+++|.|+||.||+|+.. +++.||||+.-.+.. .-.+|+++|+.+.|||||++.-+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4556789999999999999964 579999998764322 2347999999999999999998884322 34689
Q ss_pred EecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-CcEEEeeecccccc
Q 002289 684 YEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLA 760 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~-~~~kl~DFGla~~~ 760 (941)
|||||. +|.+.++.. .+..++...++-++.||.+||.|||+.+ |+||||||.|+|+|.+ |.+||+|||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999964 999998742 3455778888899999999999999998 9999999999999976 99999999999987
Q ss_pred CCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhh
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 839 (941)
... ........|..|+|||.+.+ ..|+.+.||||.||++.||+-|+..|.+... .+++..... +
T Consensus 177 ~~~--------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik------~ 241 (364)
T KOG0658|consen 177 VKG--------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIK------V 241 (364)
T ss_pred ccC--------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHH------H
Confidence 543 23356678899999999988 5799999999999999999999877765433 333322111 1
Q ss_pred hcCCCCCCChHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCC
Q 002289 840 IDGNMGSYPSECVEKFIKLALKCCQDE--TDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 917 (941)
Q Consensus 840 ~~~~~~~~~~~~~~~l~~l~~~c~~~~--p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 917 (941)
++....+... |+..+ -.+-|.+.... ..+ -.....++++.||+.++|+++|.+|.+|.|+|.
T Consensus 242 ----lG~Pt~e~I~--------~mn~~y~~~~~p~ik~~~--~~~--~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 242 ----LGTPTREDIK--------SMNPNYTEFKFPQIKAHP--WHK--VFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ----hCCCCHHHHh--------hcCcccccccCccccccc--cee--ecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 1111111111 11111 01111111100 000 123456677889999999999999999999999
Q ss_pred CCCCCC
Q 002289 918 HPYVSS 923 (941)
Q Consensus 918 Hpwf~~ 923 (941)
||||+.
T Consensus 306 h~fFde 311 (364)
T KOG0658|consen 306 HPFFDE 311 (364)
T ss_pred chhhHH
Confidence 999965
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.1e-40 Score=360.56 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=204.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47889999999999999999975 68999999986432 223456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 9999999999996543 4888999999999999999999999 999999999999999999999999998764321
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... +..+ .
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-~~~~---------i~~~-~ 214 (291)
T cd05612 155 ---------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG-IYEK---------ILAG-K 214 (291)
T ss_pred ---------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH---------HHhC-C
Confidence 123458999999999999999999999999999999999999996543211 0000 0000 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC-----CccCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKHP 919 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s-----a~e~L~Hp 919 (941)
..++ ...+....++|.+||..||++|++ ++|+++||
T Consensus 215 ~~~~---------------------------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 215 LEFP---------------------------------------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred cCCC---------------------------------------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 0000 011223457888889999999995 99999999
Q ss_pred CCCCCCC
Q 002289 920 YVSSDVS 926 (941)
Q Consensus 920 wf~~~~~ 926 (941)
||....+
T Consensus 256 ~~~~~~~ 262 (291)
T cd05612 256 WFKSVDW 262 (291)
T ss_pred cccCCCH
Confidence 9976443
No 36
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-40 Score=364.98 Aligned_cols=256 Identities=26% Similarity=0.379 Sum_probs=212.4
Q ss_pred cCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
+-|+..+.||+|+-|.|-.|+. .+|+.+|||++...... ....+.+|+-+|+-+.||||+++++.+++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4466788999999999999995 58999999998765221 1346789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|-|.+++-+++ ++.+.++.++++||+.|+.|+|..+ |+||||||+|+|+|..+++||+|||+|.....
T Consensus 92 Eyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~-- 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP-- 164 (786)
T ss_pred EecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC--
Confidence 9999999999997765 4888999999999999999999999 99999999999999999999999999986432
Q ss_pred CCCccccccccccccCCCcccccccccCCCC-chhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
.......+|++.|.|||+++|.+|. .++||||.|||||.|+||+.||+++. ....+.. +.
T Consensus 165 ------gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-ir~LLlK---------V~--- 225 (786)
T KOG0588|consen 165 ------GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-IRVLLLK---------VQ--- 225 (786)
T ss_pred ------CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-HHHHHHH---------HH---
Confidence 3344566899999999999999885 57999999999999999999998433 1111110 00
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
...+.+.....+++-|||++||.+||++|+|.+|+++|||+..
T Consensus 226 -------------------------------------~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 226 -------------------------------------RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred -------------------------------------cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 0112223334455668999999999999999999999999977
Q ss_pred CCCC
Q 002289 924 DVSG 927 (941)
Q Consensus 924 ~~~~ 927 (941)
-..-
T Consensus 269 ~~~~ 272 (786)
T KOG0588|consen 269 YTSL 272 (786)
T ss_pred CCCC
Confidence 6553
No 37
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.3e-40 Score=343.73 Aligned_cols=281 Identities=23% Similarity=0.327 Sum_probs=227.1
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC-CcEEEEEEeccCCchhh---HhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
-+.|+..+.||+|.-|+||++..++ +..+|+|++.+.....+ .+...|-+||+.++||.++.+|+.|+.++..|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 3456667899999999999999764 68999999987655443 4677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
||||+||+|..+.+++....+++..++.++..++-||+|||-.| ||.|||||+||||.++|++-|+||.++......
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999999999999999999999999999999999999999 999999999999999999999999997543210
Q ss_pred -CC-----------------------------C-C------------------ccccccccccccCCCcccccccccCCC
Q 002289 764 -DI-----------------------------E-G------------------IVPAHVSTVVKGTPGYLDPEYFLTHKL 794 (941)
Q Consensus 764 -~~-----------------------------~-~------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~ 794 (941)
.. . . ......+...+||-.|+|||++.|...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00 0 0 000122345679999999999999999
Q ss_pred CchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 002289 795 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 874 (941)
Q Consensus 795 ~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~ 874 (941)
+.++|+|+|||++|||+.|+.||....+... +..++.... .+|.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T----------l~NIv~~~l-~Fp~------------------------- 356 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET----------LRNIVGQPL-KFPE------------------------- 356 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhh----------HHHHhcCCC-cCCC-------------------------
Confidence 9999999999999999999999976554221 111211111 1110
Q ss_pred HHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC----CccCCCCCCCCCCCCCCccccccccccCCC
Q 002289 875 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS----SSSMLKHPYVSSDVSGSNLVSGVIPTITPR 941 (941)
Q Consensus 875 ~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s----a~e~L~Hpwf~~~~~~~~~~~~~~~~~~~~ 941 (941)
.+.....+.|||+++|..||.+|+- |.|+-+||||++..+. ++...+||.-|+
T Consensus 357 ------------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa--Lir~~~PP~iP~ 413 (459)
T KOG0610|consen 357 ------------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA--LIRCARPPEIPK 413 (459)
T ss_pred ------------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh--heeccCCCcCCC
Confidence 0112244568999999999999999 9999999999998887 777777776553
No 38
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1e-39 Score=365.43 Aligned_cols=199 Identities=26% Similarity=0.397 Sum_probs=173.6
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC--CcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
.++|++.+.||+|+||.||+|.+++ +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4568889999999999999998643 4689999886422 2224567899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999997653 4889999999999999999999999 99999999999999999999999999976432
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 184 ~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 184 R----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE 232 (340)
T ss_pred C----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC
Confidence 1 123468999999999999889999999999999999999999997543
No 39
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.1e-39 Score=361.39 Aligned_cols=263 Identities=27% Similarity=0.464 Sum_probs=209.4
Q ss_pred HHhcCCCccceeeccCcEEEEEEEe------CCCcEEEEEEeccCCc-hhhHhHHHHHHHHHhc-CCCceeeeeeccccC
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 677 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 677 (941)
...++|++.++||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++++.+ +||||++++++|...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 4567899999999999999999974 2357899999875432 2345789999999999 899999999988654
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 002289 678 -GEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 700 (941)
Q Consensus 678 -~~~~LV~e~~~~gsL~~~l~~~~-------------------------------------------------------- 700 (941)
+..++||||+++|+|.+++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 46899999999999999986432
Q ss_pred ----CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccc
Q 002289 701 ----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 776 (941)
Q Consensus 701 ----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~ 776 (941)
..++++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++....... ......
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~ 235 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGS 235 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcc-----hhcccC
Confidence 134788889999999999999999999 99999999999999999999999999986532211 011122
Q ss_pred cccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHH
Q 002289 777 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 855 (941)
Q Consensus 777 ~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 855 (941)
..++..|+|||++.+..++.++|||||||++|||++ |+.||........... .+..+.....+..++..+
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l 306 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ---------RLKDGTRMRAPENATPEI 306 (338)
T ss_pred CCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH---------HHhcCCCCCCCCCCCHHH
Confidence 345678999999999999999999999999999997 9999975432111111 112222233455667789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 856 IKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 856 ~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
.+++.+||+.+|++||++.++++.|+++..
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999998653
No 40
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.6e-39 Score=354.18 Aligned_cols=284 Identities=22% Similarity=0.284 Sum_probs=209.3
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|++.+.||+|+||+||+|+.+ +++.||+|+++.... ...+.+.+|+++++.++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47899999999999999999975 688999999875322 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|++++.+..+... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 154 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS- 154 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc-
Confidence 9988777655432 235888999999999999999999999 9999999999999999999999999998653221
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
........|+..|+|||++.+..++.++||||+||++|||++|+.||............ ....+
T Consensus 155 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~-----------~~~~~ 218 (287)
T cd07848 155 -----NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI-----------QKVLG 218 (287)
T ss_pred -----cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------HHhhC
Confidence 11122346889999999999989999999999999999999999999765432211111 01112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
..+.+....+.. .........|........ + .......+..+.+|+.+||+.||++|+|++|+|+||||
T Consensus 219 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~--~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 219 PLPAEQMKLFYS----NPRFHGLRFPAVNHPQSL-E--RRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CCCHHHHHhhhc----cchhcccccCcccCcccH-H--HhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 223222221110 000000011111000000 0 01112234557799999999999999999999999998
No 41
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.9e-39 Score=356.77 Aligned_cols=286 Identities=21% Similarity=0.324 Sum_probs=209.3
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
.++|++.+.||+|+||+||+|+.. +++.||||+++..... ....+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999975 6899999998754322 23467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|++ ++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 995 68888886543 45788899999999999999999999 9999999999999999999999999987543211
Q ss_pred CCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....+........... .
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~------~---- 221 (303)
T cd07869 158 ------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV------L---- 221 (303)
T ss_pred ------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHH------h----
Confidence 11233457899999999876 458889999999999999999999997655433332221110 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC--CCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETD--ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~--~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
+......+..... +-...|+ ...+...+.+... . ......+.+|+.+||+.||++|+|++|+|+||||+
T Consensus 222 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~ 292 (303)
T cd07869 222 GTPNEDTWPGVHS----LPHFKPERFTLYSPKNLRQAWN----K-LSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS 292 (303)
T ss_pred CCCChhhccchhh----ccccccccccccCCccHHHHhh----c-cCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence 0000000000000 0000010 0001111111111 1 11234567899999999999999999999999998
Q ss_pred CC
Q 002289 923 SD 924 (941)
Q Consensus 923 ~~ 924 (941)
..
T Consensus 293 ~~ 294 (303)
T cd07869 293 DL 294 (303)
T ss_pred cC
Confidence 63
No 42
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.7e-39 Score=354.57 Aligned_cols=278 Identities=24% Similarity=0.359 Sum_probs=206.7
Q ss_pred cCCCccceeeccCcEEEEEEEeC--CCcEEEEEEeccCCch--hhHhHHHHHHHHHhc---CCCceeeeeeccc-----c
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCD-----E 676 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~-----~ 676 (941)
++|++.+.||+|+||+||+|+.. +++.||+|+++..... ....+.+|+++++.+ +||||++++++|. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 47899999999999999999863 4788999988753222 234566787777665 6999999999874 3
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecc
Q 002289 677 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 677 ~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGl 756 (941)
....++||||++ ++|.+++.......+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999995 69999997766566899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccc
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||....+.... ..
T Consensus 157 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~-~~------- 220 (290)
T cd07862 157 ARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GK------- 220 (290)
T ss_pred eEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH-HH-------
Confidence 9765321 1223456899999999999889999999999999999999999999765442211 11
Q ss_pred hhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCC
Q 002289 837 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 916 (941)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 916 (941)
+++......+.+++... .+...++...+. .... ...+..+....+++.+||+.||++|||+.|+|
T Consensus 221 --i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 221 --ILDVIGLPGEEDWPRDV-ALPRQAFHSKSA--QPIE----------KFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred --HHHHhCCCChhhchhhh-cccchhccCCCC--CCHH----------HHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 11110011111211111 111222222211 1111 12234455667899999999999999999999
Q ss_pred CCCCC
Q 002289 917 KHPYV 921 (941)
Q Consensus 917 ~Hpwf 921 (941)
+||||
T Consensus 286 ~hp~f 290 (290)
T cd07862 286 SHPYF 290 (290)
T ss_pred cCCCC
Confidence 99998
No 43
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=346.21 Aligned_cols=264 Identities=28% Similarity=0.392 Sum_probs=206.7
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--------------hhHhHHHHHHHHHhcCCCceeeee
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------------GEKEFLTEIQFLSRLHHRNLVSLV 671 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~nIv~l~ 671 (941)
..++|++...||+|.||.|-+|+.. +++.||||++.+.... ..+.+.+||.+|++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4578999999999999999999965 7999999998753211 124788999999999999999999
Q ss_pred ecccc--CCcEEEEEecCCCCCHHHHHhhcCCCC-ccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc
Q 002289 672 GYCDE--EGEQMLVYEFMSNGTLRDQLSAKSKEP-LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 748 (941)
Q Consensus 672 ~~~~~--~~~~~LV~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~ 748 (941)
.+..+ .+.+|||+|||..|.+... ....+ +++.++++++++++.||+|||.++ ||||||||+|+|++++|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCc
Confidence 99865 4689999999988877543 23334 899999999999999999999999 999999999999999999
Q ss_pred EEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCC----CCchhHhHHHHHHHHHHHhCCCCCCCCchhH
Q 002289 749 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGKNIV 824 (941)
Q Consensus 749 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~ 824 (941)
+||+|||.+.........+. ........||+.|+|||...++. .+.+.||||+||+||.|+.|+.||.+...+.
T Consensus 249 VKIsDFGVs~~~~~~~~~~~--d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~ 326 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGS--DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE 326 (576)
T ss_pred EEeeccceeeecccCCcccc--HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH
Confidence 99999999987654432221 22233478999999999998733 3567999999999999999999997544321
Q ss_pred HHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCC
Q 002289 825 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTS 904 (941)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~ 904 (941)
-.- +++ .+|-.=|... +..+.+.|+|.+||..
T Consensus 327 l~~----------KIv------------------------n~pL~fP~~p--------------e~~e~~kDli~~lL~K 358 (576)
T KOG0585|consen 327 LFD----------KIV------------------------NDPLEFPENP--------------EINEDLKDLIKRLLEK 358 (576)
T ss_pred HHH----------HHh------------------------cCcccCCCcc--------------cccHHHHHHHHHHhhc
Confidence 110 111 1222223322 2234445889999999
Q ss_pred CCCCCCCCccCCCCCCCCCCCC
Q 002289 905 KEETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 905 dP~~R~sa~e~L~Hpwf~~~~~ 926 (941)
||++|++..++..|||.+.+..
T Consensus 359 dP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 359 DPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred ChhheeehhhheecceeccCCC
Confidence 9999999999999999987644
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-40 Score=325.44 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=214.0
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
.++|++.+.||+|.||.||.|+.+ ++..||+|++...... -+.++.+|+++-+.++||||+++++||.++...||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 467889999999999999999954 6889999998654332 256899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
+||.++|++...|.......+++.....++.|+|.||.|+|..+ ||||||||+|+|++.++..||+|||.+...+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999999998777777999999999999999999999998 9999999999999999999999999987543
Q ss_pred CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
.......+||..|.+||...+..++..+|+|++|++.||++.|..||.....
T Consensus 176 -------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------------------- 227 (281)
T KOG0580|consen 176 -------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------------------- 227 (281)
T ss_pred -------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh---------------------
Confidence 2345667899999999999999999999999999999999999999964321
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
.+.++-+.++--..| ......+.|+|.++|..+|.+|.+-.|++.|||+..
T Consensus 228 ---------~etYkrI~k~~~~~p--------------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 228 ---------SETYKRIRKVDLKFP--------------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred ---------HHHHHHHHHccccCC--------------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 111111222211111 123345568889999999999999999999999865
Q ss_pred C
Q 002289 924 D 924 (941)
Q Consensus 924 ~ 924 (941)
.
T Consensus 279 ~ 279 (281)
T KOG0580|consen 279 N 279 (281)
T ss_pred c
Confidence 3
No 45
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=360.66 Aligned_cols=273 Identities=24% Similarity=0.382 Sum_probs=217.3
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---hHhHHHHHHHHHhc-CCCceeeeeeccccCCcE
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 680 (941)
...++|....+||+|.||+|+++..+ +++.+|||++++...-. .+..+.|-+++... +||.++.++.+|+.+++.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34578889999999999999999976 68899999999865433 34567788888777 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
|+||||+.||++..+. ....+++..+..++..|+.||+|||+++ ||+||||.+|||+|.+|.+||+|||+++..
T Consensus 445 ~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccccc
Confidence 9999999999944333 3346999999999999999999999999 999999999999999999999999999853
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
.. ....+...+||+.|||||++.+..|+.++|+|||||+||||+.|..||..++.. .+++.|
T Consensus 519 m~-------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----------e~FdsI 580 (694)
T KOG0694|consen 519 MG-------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----------EVFDSI 580 (694)
T ss_pred CC-------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----------HHHHHH
Confidence 21 234567789999999999999999999999999999999999999999755431 112222
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC-----CccC
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSM 915 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s-----a~e~ 915 (941)
-.....+|..++.+.. ++++++|+.+|++|+- |.++
T Consensus 581 ~~d~~~yP~~ls~ea~---------------------------------------~il~~ll~k~p~kRLG~~e~d~~~i 621 (694)
T KOG0694|consen 581 VNDEVRYPRFLSKEAI---------------------------------------AIMRRLLRKNPEKRLGSGERDAEDI 621 (694)
T ss_pred hcCCCCCCCcccHHHH---------------------------------------HHHHHHhccCcccccCCCCCCchhh
Confidence 2222334444444433 3455566677777764 5788
Q ss_pred CCCCCCCCCCCCCccccccccccCCC
Q 002289 916 LKHPYVSSDVSGSNLVSGVIPTITPR 941 (941)
Q Consensus 916 L~Hpwf~~~~~~~~~~~~~~~~~~~~ 941 (941)
.+||||++-.+..-....+-||+.|+
T Consensus 622 ~~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 622 KKHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred hhCCccccCCHHHHhhccCCCCCCcc
Confidence 89999999777655556666766653
No 46
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2e-39 Score=362.23 Aligned_cols=198 Identities=25% Similarity=0.424 Sum_probs=174.5
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999975 689999999875321 22356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 9999999999997643 4788889999999999999999999 999999999999999999999999999765321
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 172 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 219 (329)
T PTZ00263 172 ---------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT 219 (329)
T ss_pred ---------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC
Confidence 123468999999999999999999999999999999999999996543
No 47
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.4e-39 Score=359.42 Aligned_cols=194 Identities=26% Similarity=0.342 Sum_probs=168.7
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
+.||+|+||.||+|+.. +|+.||+|+++.... .....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999964 689999999875321 22346788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccc
Q 002289 691 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770 (941)
Q Consensus 691 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 770 (941)
+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------- 148 (323)
T cd05571 81 ELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------- 148 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-------
Confidence 9999986543 5889999999999999999999999 999999999999999999999999998753211
Q ss_pred cccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 771 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 198 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (323)
T ss_pred CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC
Confidence 11223456999999999999999999999999999999999999999654
No 48
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.4e-39 Score=360.79 Aligned_cols=297 Identities=22% Similarity=0.363 Sum_probs=223.6
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
..++|++.++||+|+||.||+|.+. ++..+|+|.+..... ...+.+.+|++++++++|+||++++++|.+.++.++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3578999999999999999999976 688999998875432 23457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcC-CCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+|||+++++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999996543 478899999999999999999974 5 999999999999999999999999998754321
Q ss_pred CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ........ ...+.
T Consensus 158 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~--~~~~~~~~-----~~~~~ 221 (333)
T cd06650 158 ---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK--ELELMFGC-----PVEGD 221 (333)
T ss_pred ---------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh--HHHHHhcC-----cccCC
Confidence 112345889999999999989999999999999999999999999754321 11111100 00000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC------CCCCCcccccccCCCCCCCCCCCccCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE------SDTKTPEFINSEHTSKEETPPSSSSMLK 917 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~------~~~~~~dll~~~L~~dP~~R~sa~e~L~ 917 (941)
... .............|....|..||++.. .+....+....+. .+.+..+|+.+||+.||++|||++|+++
T Consensus 222 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 222 PAE--SETSPRPRPPGRPLSSYGPDSRPPMAI-FELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccc--cccCcccCCccchhhhhcccccccccH-HHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 000 000011112223455567888887642 2233322222111 1233468999999999999999999999
Q ss_pred CCCCCCCCCC
Q 002289 918 HPYVSSDVSG 927 (941)
Q Consensus 918 Hpwf~~~~~~ 927 (941)
||||+....+
T Consensus 299 h~~~~~~~~~ 308 (333)
T cd06650 299 HAFIKRSEAE 308 (333)
T ss_pred CHHHhcCccc
Confidence 9999876443
No 49
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.4e-39 Score=328.92 Aligned_cols=294 Identities=24% Similarity=0.355 Sum_probs=214.8
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC---C--CcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeecccc-CC
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP---D--GTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 678 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~---~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~ 678 (941)
....|+....||+|.||.||+|.-. + .+.+|+|.++..... -.....+|+.+++.++||||+.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3457888999999999999999643 2 237999998864221 13467899999999999999999999866 77
Q ss_pred cEEEEEecCCCCCHHHHHhhc---CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC----CcEEE
Q 002289 679 EQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKV 751 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~----~~~kl 751 (941)
..++++||.+. +|.+.++-+ ....++...++.|..||+.|+.|||++- |+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEe
Confidence 89999999975 999988643 2246888999999999999999999999 9999999999999877 89999
Q ss_pred eeeccccccCCCCCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002289 752 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 830 (941)
Q Consensus 752 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~ 830 (941)
+|||+|+.+..+-. +-.....++-|..|+|||.+.|. .|+.+.||||.||++.||+|-.+.|...+...+. .
T Consensus 178 aDlGlaR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~-~-- 250 (438)
T KOG0666|consen 178 ADLGLARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKT-K-- 250 (438)
T ss_pred ecccHHHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhccc-C--
Confidence 99999998865421 12233456678999999999984 6899999999999999999987777543221100 0
Q ss_pred HhhccchhhhcCCCCCCChHHHHHHHHHHHHhcc---cCCCCCCCHHHHHHHH----------HHhHhhCCCCCCCCccc
Q 002289 831 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQ---DETDARPSMSEVMREL----------ESIWNMMPESDTKTPEF 897 (941)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~---~~p~~RPs~~~v~~~L----------~~~~~~~~~~~~~~~dl 897 (941)
.++..+-..++.+++-.-.+ ++-+.-|.....+... -.+.......++.+.+|
T Consensus 251 --------------~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~L 316 (438)
T KOG0666|consen 251 --------------NPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDL 316 (438)
T ss_pred --------------CCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHH
Confidence 01111222222222110000 0001112222222222 23333444566778999
Q ss_pred ccccCCCCCCCCCCCccCCCCCCCCCCC
Q 002289 898 INSEHTSKEETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 898 l~~~L~~dP~~R~sa~e~L~Hpwf~~~~ 925 (941)
+.+||++||.+|+||++||+|+||+.+.
T Consensus 317 L~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 317 LQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred HHHHhccCchhhccHHHHhcccccccCC
Confidence 9999999999999999999999998863
No 50
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.4e-39 Score=358.01 Aligned_cols=298 Identities=23% Similarity=0.374 Sum_probs=214.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
.++|++.+.||+|+||.||+++.. +|..||+|.+..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 478999999999999999999975 688999999875432 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+. |+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999996543 47889999999999999999998532 999999999999999999999999998754321
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... + ........ ..+....
T Consensus 158 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~-~~~~~~~~----~~~~~~~ 224 (331)
T cd06649 158 -------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK-E-LEAIFGRP----VVDGEEG 224 (331)
T ss_pred -------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-H-HHHHhccc----ccccccC
Confidence 122346899999999999999999999999999999999999999654321 1 11111000 0000000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC------CCCCCCcccccccCCCCCCCCCCCccCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP------ESDTKTPEFINSEHTSKEETPPSSSSMLKHP 919 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~------~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 919 (941)
. +.............+....+..+|.+. +.+.+..+..... ...++..+|+.+||++||++|||++|+++||
T Consensus 225 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 225 E-PHSISPRPRPPGRPVSGHGMDSRPAMA-IFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred C-ccccCcccccccccccccccccccchh-HHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 000000000000001111222333332 1122222211111 1123456899999999999999999999999
Q ss_pred CCCCCCC
Q 002289 920 YVSSDVS 926 (941)
Q Consensus 920 wf~~~~~ 926 (941)
||.....
T Consensus 303 ~~~~~~~ 309 (331)
T cd06649 303 FIKRSEV 309 (331)
T ss_pred HHhhccc
Confidence 9976544
No 51
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=351.48 Aligned_cols=240 Identities=29% Similarity=0.513 Sum_probs=205.9
Q ss_pred ccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 613 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 613 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
.++-||.|+-|.||+|+++ ++.||||+++.- -..+|+-|++++|+||+.|.|+|...-.+|||||||..|-|
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 3567999999999999985 588999987641 23578899999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.++|+.. .++.......+..+||.||.|||.+. |||||||+-||||+.+..|||+|||-++..... .
T Consensus 200 ~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--------S 266 (904)
T KOG4721|consen 200 YEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK--------S 266 (904)
T ss_pred HHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh--------h
Confidence 9999654 45788888899999999999999999 999999999999999999999999999865431 2
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC-CCCChHH
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSEC 851 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 851 (941)
.....+||..|||||+++..++++|+|||||||+||||+||..||.+... ...++-+-...+ ...|..|
T Consensus 267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----------sAIIwGVGsNsL~LpvPstc 336 (904)
T KOG4721|consen 267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----------SAIIWGVGSNSLHLPVPSTC 336 (904)
T ss_pred hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----------heeEEeccCCcccccCcccC
Confidence 23567899999999999999999999999999999999999999975432 122223322222 3578999
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 852 VEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 852 ~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
++.+.-+++.||+..|..||++.+++.+|+-.
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 99999999999999999999999999998754
No 52
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=380.35 Aligned_cols=262 Identities=32% Similarity=0.534 Sum_probs=219.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC--Cc----EEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD--GT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 680 (941)
..+.+..+.||+|+||.||.|...+ |. .||||.++... .+...+|.+|..+|+.++|||||+++|.|.+.+..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 4455667899999999999999643 43 48999988654 44467899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhc-----CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 002289 681 MLVYEFMSNGTLRDQLSAK-----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 755 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFG 755 (941)
++++|||++|+|..+|++. ....++..+.+.++.|||+|+.||++++ +|||||.++|+|++....+||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 9999999999999999764 1346889999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhc
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 834 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 834 (941)
+|+.....+++... ....-...|||||.+..+.++.|+|||||||++||++| |..||....+..
T Consensus 848 lArDiy~~~yyr~~-----~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~---------- 912 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKH-----GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE---------- 912 (1025)
T ss_pred hhHhhhhchheecc-----CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH----------
Confidence 99955443332111 11123468999999999999999999999999999999 899998766522
Q ss_pred cchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002289 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887 (941)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 887 (941)
.+..+..+.+.+.|..|++.++++|..||+.+|++||++..+++.+..+.+..
T Consensus 913 v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 913 VLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 12224445577789999999999999999999999999999999888876644
No 53
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-40 Score=326.52 Aligned_cols=257 Identities=25% Similarity=0.413 Sum_probs=206.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh--------hHhHHHHHHHHHhc-CCCceeeeeeccccC
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------EKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 677 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 677 (941)
-++|...+.||+|..++|-++..+ +|..+|+|++....... .+.-.+|+.+|+++ .||+|+++.++|..+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 356777889999999999998865 68899999876422111 23456899999998 699999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
...++|+|.|+.|.|.|++... -.+++...++|++|+..|++|||.+. ||||||||+|||+|++.++||+|||.|
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecccee
Confidence 9999999999999999999654 45899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCccccccccc------CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHH
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 831 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~ 831 (941)
+.+.. +......+||++|+|||.+.. ..|+..+|+||.||++|.++.|..||.+...+.-
T Consensus 171 ~~l~~--------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlM------ 236 (411)
T KOG0599|consen 171 CQLEP--------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLM------ 236 (411)
T ss_pred eccCC--------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHH------
Confidence 97754 345677899999999999863 3578899999999999999999999965433210
Q ss_pred hhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC
Q 002289 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 911 (941)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s 911 (941)
+..+..+.. .+.. |. +.+.....+|||.++|+.||.+|+|
T Consensus 237 ----LR~ImeGky-qF~s---------------------pe--------------Wadis~~~KdLIsrlLqVdp~~Rit 276 (411)
T KOG0599|consen 237 ----LRMIMEGKY-QFRS---------------------PE--------------WADISATVKDLISRLLQVDPTKRIT 276 (411)
T ss_pred ----HHHHHhccc-ccCC---------------------cc--------------hhhccccHHHHHHHHHeeCchhccc
Confidence 001111111 1111 11 1122345578999999999999999
Q ss_pred CccCCCCCCCCC
Q 002289 912 SSSMLKHPYVSS 923 (941)
Q Consensus 912 a~e~L~Hpwf~~ 923 (941)
|+|+|.||||.+
T Consensus 277 ake~LaHpff~q 288 (411)
T KOG0599|consen 277 AKEALAHPFFIQ 288 (411)
T ss_pred HHHHhcChHHHH
Confidence 999999999944
No 54
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.6e-39 Score=354.89 Aligned_cols=192 Identities=29% Similarity=0.408 Sum_probs=167.5
Q ss_pred eeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
||+|+||.||+|... +++.||+|+++... ......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999975 58899999986432 22345678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-------~ 148 (312)
T cd05585 81 FHHLQREG--RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-------D 148 (312)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-------C
Confidence 99996543 4889999999999999999999999 9999999999999999999999999987532211 1
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 223456899999999999999999999999999999999999999754
No 55
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2e-38 Score=360.48 Aligned_cols=285 Identities=24% Similarity=0.368 Sum_probs=215.3
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC--CchhhHhHHHHHHHHHhcCCCceeeeeeccccCC-----cEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 681 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~ 681 (941)
+|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999964 7899999988643 2233467889999999999999999999997766 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+||||++ ++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999995 6888887543 35889999999999999999999999 9999999999999999999999999998653
Q ss_pred CCCCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
... ........++..|+|||++.+. .++.++||||+||++|||++|+.||....... ......
T Consensus 155 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~--------- 218 (372)
T cd07853 155 PDE------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLIT--------- 218 (372)
T ss_pred cCc------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHH---------
Confidence 221 1112334578899999999874 57899999999999999999999997654322 111111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCC
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 920 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpw 920 (941)
...+..+.+.......-....+...+...|....+. ......++.+.+||.+||..||++|||++|+|+|||
T Consensus 219 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 219 -DLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLY-------TLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred -HHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhc-------ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 111222222222222223333334455555433221 122334566788999999999999999999999999
Q ss_pred CCCC
Q 002289 921 VSSD 924 (941)
Q Consensus 921 f~~~ 924 (941)
|...
T Consensus 291 ~~~~ 294 (372)
T cd07853 291 LDEG 294 (372)
T ss_pred hCCC
Confidence 9873
No 56
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.6e-38 Score=354.00 Aligned_cols=234 Identities=24% Similarity=0.288 Sum_probs=184.4
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
+.||+|+||.||++... +|+.||+|+++.... .....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999964 689999999875322 22346778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccc
Q 002289 691 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770 (941)
Q Consensus 691 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 770 (941)
+|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~------ 149 (323)
T cd05595 81 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG------ 149 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC------
Confidence 9999886543 5889999999999999999999999 9999999999999999999999999987532111
Q ss_pred cccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChH
Q 002289 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 850 (941)
Q Consensus 771 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (941)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ... +......+|..
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~~~----------~~~~~~~~p~~ 217 (323)
T cd05595 150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FEL----------ILMEEIRFPRT 217 (323)
T ss_pred -CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-HHH----------HhcCCCCCCCC
Confidence 112335689999999999999999999999999999999999999975432111 110 00111123334
Q ss_pred HHHHHHHHHHHhcccCCCCCC
Q 002289 851 CVEKFIKLALKCCQDETDARP 871 (941)
Q Consensus 851 ~~~~l~~l~~~c~~~~p~~RP 871 (941)
.+..+.+++..|++.+|++|+
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhC
Confidence 445555666666666666665
No 57
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1e-38 Score=373.40 Aligned_cols=297 Identities=22% Similarity=0.306 Sum_probs=208.7
Q ss_pred HHHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCC------Cceeeeeecc
Q 002289 602 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH------RNLVSLVGYC 674 (941)
Q Consensus 602 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~l~~~~ 674 (941)
+++....++|++.++||+|+||+||+|... +++.||||+++... .....+..|+++++.++| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344456789999999999999999999964 68899999986432 223455667777777654 4588999988
Q ss_pred ccC-CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCC-----
Q 002289 675 DEE-GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKF----- 747 (941)
Q Consensus 675 ~~~-~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~----- 747 (941)
... ++.++|||++ +++|.+++.+. ..+++..+..|+.||+.||+|||+ .+ ||||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccc
Confidence 654 5789999998 78999988654 358899999999999999999997 47 99999999999998765
Q ss_pred -----------cEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCC
Q 002289 748 -----------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816 (941)
Q Consensus 748 -----------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~P 816 (941)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~p 344 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDER----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLL 344 (467)
T ss_pred ccccccCCCCceEEECCCCccccCc----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 49999999876421 122345789999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCH--HHHHHHHHHhHhhCCCCCCC
Q 002289 817 ISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSM--SEVMRELESIWNMMPESDTK 893 (941)
Q Consensus 817 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~--~~v~~~L~~~~~~~~~~~~~ 893 (941)
|....+... ... +....+.+|.++.... ......++......+|.. ..+.+............++.
T Consensus 345 f~~~~~~~~-~~~----------i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (467)
T PTZ00284 345 YDTHDNLEH-LHL----------MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDL 413 (467)
T ss_pred CCCCChHHH-HHH----------HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHH
Confidence 976543221 111 1111233333332210 000111111111111111 11111110000000112355
Q ss_pred CcccccccCCCCCCCCCCCccCCCCCCCCCCCC
Q 002289 894 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 894 ~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~ 926 (941)
+.|||.+||++||++|+||+|+|+||||...-.
T Consensus 414 ~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 414 LCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred HHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 679999999999999999999999999987444
No 58
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2e-38 Score=346.89 Aligned_cols=200 Identities=27% Similarity=0.417 Sum_probs=174.5
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
+|++.+.||+|+||+||++... +++.||+|++...... ....+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999964 6899999998653322 23457889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 999999999887655556899999999999999999999999 9999999999999999999999999987653211
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~ 204 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQR 204 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCC
Confidence 112345889999999999989999999999999999999999999753
No 59
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.8e-38 Score=354.53 Aligned_cols=287 Identities=24% Similarity=0.369 Sum_probs=208.6
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC--CchhhHhHHHHHHHHHhcCCCceeeeeeccccC-----CcEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQM 681 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~ 681 (941)
+|++.+.||+|+||.||+|+.. +++.||||+++.. .......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999965 6899999998742 222345688999999999999999999987433 3579
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+||||+ +++|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELM-ESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecC-CCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 999999 579999886543 4889999999999999999999999 9999999999999999999999999997543
Q ss_pred CCCCCCccccccccccccCCCccccccccc--CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 839 (941)
..... ........||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ...... ..
T Consensus 155 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-~~~~~~------~~- 222 (338)
T cd07859 155 NDTPT----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLI------TD- 222 (338)
T ss_pred cccCc----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHH------HH-
Confidence 22110 111234568999999999876 67899999999999999999999999654432 111110 01
Q ss_pred hcCCCCCCChHHHHHHHHH-HHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 840 IDGNMGSYPSECVEKFIKL-ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 840 ~~~~~~~~~~~~~~~l~~l-~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
..+..+.+....+... ....+.......|.. ....++..++...+++.+||..||++|||++|+|+|
T Consensus 223 ---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 223 ---LLGTPSPETISRVRNEKARRYLSSMRKKQPVP---------FSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred ---HhCCCCHHHHHHhhhhhHHHHHHhhcccCCCc---------hHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 1111222222221110 000000000111110 011233445566789999999999999999999999
Q ss_pred CCCCCCCC
Q 002289 919 PYVSSDVS 926 (941)
Q Consensus 919 pwf~~~~~ 926 (941)
|||.+...
T Consensus 291 p~f~~~~~ 298 (338)
T cd07859 291 PYFKGLAK 298 (338)
T ss_pred chhhhcCc
Confidence 99977554
No 60
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.9e-38 Score=346.04 Aligned_cols=194 Identities=25% Similarity=0.404 Sum_probs=167.3
Q ss_pred eeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
||+|+||+||++... +++.||+|.+...... ..+.+..|+++++.++|+||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999965 6899999998653322 224577899999999999999999999999999999999999999
Q ss_pred HHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccc
Q 002289 693 RDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770 (941)
Q Consensus 693 ~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 770 (941)
.+++... ....+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~------ 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ------ 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCC------
Confidence 9887542 3346899999999999999999999999 9999999999999999999999999987653321
Q ss_pred cccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 771 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 152 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 200 (280)
T cd05608 152 -SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR 200 (280)
T ss_pred -ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 1123346899999999999999999999999999999999999999653
No 61
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=354.83 Aligned_cols=269 Identities=31% Similarity=0.484 Sum_probs=221.8
Q ss_pred chHHHHHHhcCCCccceeeccCcEEEEEEEeC--CC--cE-EEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeee
Q 002289 600 TYGEMALATNNFNSSTQIGQGGYGKVYKGILP--DG--TV-VAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLV 671 (941)
Q Consensus 600 ~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~--~~--~~-vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~ 671 (941)
.-+.|+...++....++||+|+||.||+|.+. ++ .. ||||..+... ....++|.+|.++|++++|||||++|
T Consensus 148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY 227 (474)
T ss_pred cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 33456666666677799999999999999964 22 23 8999988522 34457899999999999999999999
Q ss_pred eccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEE
Q 002289 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 751 (941)
Q Consensus 672 ~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl 751 (941)
|++..+..+++|||+|+||+|.++|++.+. .++..++..++.++|+||+|||+++ +|||||.++|+|++.++.+||
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEe
Confidence 999999999999999999999999987654 6899999999999999999999999 999999999999999999999
Q ss_pred eeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002289 752 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 830 (941)
Q Consensus 752 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~ 830 (941)
+|||+++...... .......-...|+|||.+..+.|+.++|||||||++||+++ |..||.......-.
T Consensus 304 SDFGLs~~~~~~~-------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~---- 372 (474)
T KOG0194|consen 304 SDFGLSRAGSQYV-------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK---- 372 (474)
T ss_pred CccccccCCccee-------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH----
Confidence 9999987543111 00111134578999999999999999999999999999999 88899866543211
Q ss_pred Hhhccchhh-hcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002289 831 YQSSMMFSV-IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889 (941)
Q Consensus 831 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 889 (941)
..+ ..+.+...|...+..+..++..||..+|+.||+|.++.+.++.+......
T Consensus 373 ------~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 373 ------AKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred ------HHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 122 23444566778888999999999999999999999999999998776543
No 62
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.5e-38 Score=353.03 Aligned_cols=194 Identities=27% Similarity=0.351 Sum_probs=168.5
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
+.||+|+||.||++... +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999965 68999999987532 223356788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccc
Q 002289 691 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770 (941)
Q Consensus 691 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 770 (941)
+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------- 148 (328)
T cd05593 81 ELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------- 148 (328)
T ss_pred CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc-------
Confidence 9999886543 5889999999999999999999999 999999999999999999999999998753211
Q ss_pred cccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 771 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~ 198 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC
Confidence 11123356899999999999999999999999999999999999999654
No 63
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.8e-38 Score=353.01 Aligned_cols=195 Identities=27% Similarity=0.420 Sum_probs=166.8
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||+||+|+.+ +++.||||+++... ....+.+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 68999999987532 12234567888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~------ 149 (320)
T cd05590 81 GDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN------ 149 (320)
T ss_pred chHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC------
Confidence 99999986543 4889999999999999999999999 999999999999999999999999998753211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 200 (320)
T cd05590 150 -GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN 200 (320)
T ss_pred -CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 112234568999999999999999999999999999999999999996543
No 64
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.5e-38 Score=351.66 Aligned_cols=290 Identities=25% Similarity=0.355 Sum_probs=197.2
Q ss_pred cceeeccCcEEEEEEEeC---CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeecccc--CCcEEEEEecCC
Q 002289 614 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYEFMS 688 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~LV~e~~~ 688 (941)
.++||+|+||+||+|+.. +++.||+|.+..... ...+.+|++++++++||||+++++++.. ....++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~- 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA- 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-
Confidence 468999999999999864 468899999875322 3457889999999999999999998843 45689999999
Q ss_pred CCCHHHHHhhc-------CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE----cCCCcEEEeeeccc
Q 002289 689 NGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLS 757 (941)
Q Consensus 689 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl----~~~~~~kl~DFGla 757 (941)
+++|.+++... ....+++..++.++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||++
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 46898887532 1235889999999999999999999999 9999999999999 45679999999999
Q ss_pred cccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
+....... +........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........... .+....+
T Consensus 160 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~-~~~~~~~ 234 (317)
T cd07868 160 RLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN-PYHHDQL 234 (317)
T ss_pred eccCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccc-cccHHHH
Confidence 86543211 1112234568999999999987 4589999999999999999999999964322100000 0000000
Q ss_pred hhhhcCCCCCCChHHHHHHHHHH-----HHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC
Q 002289 837 FSVIDGNMGSYPSECVEKFIKLA-----LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 911 (941)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~l~~l~-----~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s 911 (941)
..++ ...+......++.+.++. ...+........ .+...++ ......+..+.|||.+||++||++|+|
T Consensus 235 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~dli~~mL~~dP~~R~t 307 (317)
T cd07868 235 DRIF-NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC---SLIKYME---KHKVKPDSKAFHLLQKLLTMDPIKRIT 307 (317)
T ss_pred HHHH-HhcCCCChHHhHHHhhccchhhhhhhhhccccCcc---cccchHH---hcCCCCChHHHHHHHHHhccCcccCCC
Confidence 0000 001111111111111100 000000000000 0111111 111233455778999999999999999
Q ss_pred CccCCCCCCC
Q 002289 912 SSSMLKHPYV 921 (941)
Q Consensus 912 a~e~L~Hpwf 921 (941)
|+|+|+||||
T Consensus 308 ~~e~l~hp~f 317 (317)
T cd07868 308 SEQAMQDPYF 317 (317)
T ss_pred HHHHhcCCCC
Confidence 9999999998
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.2e-38 Score=356.81 Aligned_cols=197 Identities=30% Similarity=0.443 Sum_probs=174.5
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999976 589999999875322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 9999999999996543 4888999999999999999999999 99999999999999999999999999975432
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred --------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence 123456899999999999999999999999999999999999999654
No 66
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-38 Score=354.26 Aligned_cols=199 Identities=27% Similarity=0.342 Sum_probs=169.6
Q ss_pred CCCccceeeccCcEEEEEEEe----CCCcEEEEEEeccCC----chhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcE
Q 002289 610 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 680 (941)
+|++.+.||+|+||+||+++. .+++.||+|++.... ....+.+.+|+++++.+ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999885 358899999986422 12234678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 99999999999999986543 4889999999999999999999999 999999999999999999999999999764
Q ss_pred CCCCCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
.... ........||..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 156 ~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 156 LSEE------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred cccC------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 3221 1112345689999999999875 478899999999999999999999963
No 67
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.4e-38 Score=352.58 Aligned_cols=195 Identities=27% Similarity=0.414 Sum_probs=167.6
Q ss_pred ceeeccCcEEEEEEEe----CCCcEEEEEEeccCCc----hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 615 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+.||+|+||.||+++. .+++.||+|+++.... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999985 3578999999875321 2234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++|+|.+++.... .+.+..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (323)
T cd05584 82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-- 154 (323)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--
Confidence 99999999996543 4778888899999999999999999 9999999999999999999999999987432211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~ 204 (323)
T cd05584 155 -----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN 204 (323)
T ss_pred -----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence 11233568999999999999889999999999999999999999997543
No 68
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.2e-38 Score=347.81 Aligned_cols=285 Identities=22% Similarity=0.350 Sum_probs=210.4
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|.+.+.||+|+||+||+|+.+ +++.||+|.++..... ....+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57889999999999999999975 6889999998754322 234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
++ ++|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 86 LD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 96 58988886543 34788899999999999999999999 9999999999999999999999999987543221
Q ss_pred CccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||.+.+ ..++.++||||+||++|||+||+.||...... +...... .. .+
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~------~~----~~ 222 (309)
T cd07872 159 -----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIF------RL----LG 222 (309)
T ss_pred -----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH------HH----hC
Confidence 11223457889999999875 56889999999999999999999999754331 1111110 00 11
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~ 925 (941)
..+.+.+..+.......-...|..+|.. .....+..+.+..+||.+||..||++|+|++|+|+||||+.-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYKPQP---------LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccCCCc---------hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 1111111111111000001112111111 1122234456677999999999999999999999999998743
No 69
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=338.28 Aligned_cols=261 Identities=20% Similarity=0.336 Sum_probs=208.7
Q ss_pred CccccchHHHHHHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh---hHhHHHHHHHHHhcCCCceeeee
Q 002289 595 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLV 671 (941)
Q Consensus 595 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~ 671 (941)
++..++.+++.. .....||+|++|.||+|.+ +|+.||||+++...... .+.+.+|++++++++||||++++
T Consensus 11 ~~~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDIDK-----YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHcCC-----CCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 344455555522 2236799999999999998 68999999987643322 35678999999999999999999
Q ss_pred ecccc----CCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcC-CCCCeEeccCCCCcEEEcCC
Q 002289 672 GYCDE----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHK 746 (941)
Q Consensus 672 ~~~~~----~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~DLkp~NILl~~~ 746 (941)
|++.+ ....++||||+++|+|.+++... ..+++.....++.|++.||.|||+. + ++||||||+||+++++
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~ 159 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTEN 159 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCC
Confidence 99866 34689999999999999999754 3588999999999999999999984 6 7899999999999999
Q ss_pred CcEEEeeeccccccCCCCCCCccccccccccccCCCccccccccc--CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhH
Q 002289 747 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 824 (941)
Q Consensus 747 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~ 824 (941)
+.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... .
T Consensus 160 ~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-~ 228 (283)
T PHA02988 160 YKLKIICHGLEKILSSPP----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-K 228 (283)
T ss_pred CcEEEcccchHhhhcccc----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-H
Confidence 999999999987653211 12357889999999976 6899999999999999999999999975432 1
Q ss_pred HHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 825 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
+....... .......+..++..+.+++.+||+.+|++||++.++++.|+.+..
T Consensus 229 ~~~~~i~~--------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 229 EIYDLIIN--------KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHHHh--------cCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 11111100 112233455678889999999999999999999999999987653
No 70
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.4e-38 Score=361.73 Aligned_cols=286 Identities=22% Similarity=0.255 Sum_probs=206.7
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
...+|.+.+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+||+++++++...+..++|||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 3557999999999999999999975 578999996432 246789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
++ .++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 241 ~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 241 KY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99 579999886543 36899999999999999999999999 99999999999999999999999999986532211
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCch------hHHHHHHHHhhccchhh
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIAYQSSMMFSV 839 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~------~~~~~~~~~~~~~~~~~ 839 (941)
........||..|+|||++.+..++.++|||||||++|||++|..|+..... ....+.........
T Consensus 316 -----~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~--- 387 (461)
T PHA03211 316 -----TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQV--- 387 (461)
T ss_pred -----cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcc---
Confidence 1112345699999999999999999999999999999999998877643221 01111111100000
Q ss_pred hcCCCCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 840 IDGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 840 ~~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
......... ......+.... ......+..++... .+...+....+||.+||++||++||||.|+|+|
T Consensus 388 ~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 388 HVDEFPQHAGSRLVSQYRHRA-ARNRRPAYTRPAWT-----------RYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred ccccCCCCcchHHHHHHHhhh-hcccCCccCCcchh-----------hhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000011111 11111111100 01111111111111 112234566789999999999999999999999
Q ss_pred CCCCC
Q 002289 919 PYVSS 923 (941)
Q Consensus 919 pwf~~ 923 (941)
|||++
T Consensus 456 p~f~~ 460 (461)
T PHA03211 456 PLFQS 460 (461)
T ss_pred cccCC
Confidence 99976
No 71
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.9e-38 Score=352.63 Aligned_cols=192 Identities=26% Similarity=0.389 Sum_probs=166.1
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|... +++.||+|+++... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 68899999987532 22334677888888776 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~------ 149 (329)
T cd05618 81 GDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------ 149 (329)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCC------
Confidence 99999886543 5889999999999999999999999 999999999999999999999999998753221
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCC
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~ 818 (941)
........||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 150 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred -CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 112234568999999999999999999999999999999999999995
No 72
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-38 Score=347.31 Aligned_cols=260 Identities=25% Similarity=0.402 Sum_probs=215.4
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---hHhHHHHHHHHHhcC-CCceeeeeeccccCCcEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~ 681 (941)
....|++.+.||+|.||.||+++.+ +|+.+|+|++....... ...+.+|+++|+++. ||||+.+++.|.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3567888899999999999999976 59999999998655443 358899999999998 999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC----CcEEEeeeccc
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKVADFGLS 757 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~----~~~kl~DFGla 757 (941)
+|||++.||.|.+.+.+. .+++..+..++.|++.|+.|||+.+ |+||||||+|+|+... +.+|++|||+|
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 999999999999999766 3999999999999999999999999 9999999999999643 57999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
..... .......+||+.|+|||++....|+..+||||+|+++|.|++|..||..........
T Consensus 187 ~~~~~--------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~---------- 248 (382)
T KOG0032|consen 187 KFIKP--------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL---------- 248 (382)
T ss_pred eEccC--------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH----------
Confidence 87643 234567789999999999999999999999999999999999999997655322111
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCC
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 917 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 917 (941)
.+..+. +.. .++ .++.....+.+|++.||..||.+|+||.++|+
T Consensus 249 ~i~~~~-------------------~~f---~~~--------------~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 249 AILRGD-------------------FDF---TSE--------------PWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHHcCC-------------------CCC---CCC--------------CccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 111111 000 111 12223445568999999999999999999999
Q ss_pred CCCCCCCCC
Q 002289 918 HPYVSSDVS 926 (941)
Q Consensus 918 Hpwf~~~~~ 926 (941)
|||+++...
T Consensus 293 HpWi~~~~~ 301 (382)
T KOG0032|consen 293 HPWIKSIGE 301 (382)
T ss_pred CccccCCcc
Confidence 999988643
No 73
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=329.95 Aligned_cols=270 Identities=26% Similarity=0.390 Sum_probs=205.6
Q ss_pred hcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHh--cCCCceeeeeeccccCC----cEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG----EQM 681 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~ 681 (941)
....+..+.||+|.||.||||.++ ++.||||++.. +..+.|..|-++.+. ++|+||++|+++-.... +++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 344556788999999999999984 49999999975 344578888887776 58999999999875544 899
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcC------CCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE------ADPPVFHRDIKASNILLDHKFTAKVADFG 755 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~ivH~DLkp~NILl~~~~~~kl~DFG 755 (941)
||+||.+.|||.++|..+ .++|....+|+..+++||+|||+. .+|+|+|||||++||||.+|+++.|+|||
T Consensus 285 LVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred EEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999999999765 489999999999999999999974 36789999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccCC-CC-----chhHhHHHHHHHHHHHhCCCCCCCC--ch----h
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LT-----DKSDVYSLGVVFLELLTGMQPISHG--KN----I 823 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDVwSlG~ll~elltG~~Pf~~~--~~----~ 823 (941)
+|..+..... .......+||.+|||||++.+.. +. .+.||||+|.++|||+++..-++.+ .+ +
T Consensus 362 LAl~~~p~~~-----~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf 436 (534)
T KOG3653|consen 362 LALRLEPGKP-----QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF 436 (534)
T ss_pred eeEEecCCCC-----CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence 9998864332 22234478999999999997743 22 3689999999999999986655321 11 0
Q ss_pred HHHHHHHHhhccchhh--hcCCCCCCChHH-----HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002289 824 VREVNIAYQSSMMFSV--IDGNMGSYPSEC-----VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 889 (941)
Q Consensus 824 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 889 (941)
...+......+.+.+. .+..++.+|+.+ ...+.+.+..||+.|++.|-|+.=+.+.+..+....+.
T Consensus 437 e~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 437 EAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred hHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 0011000011122222 223445555543 45688999999999999999999998888877554443
No 74
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.8e-38 Score=358.40 Aligned_cols=208 Identities=26% Similarity=0.377 Sum_probs=175.3
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999975 68999999987532 122346788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999996543 4899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCccc-------------------------------cccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhC
Q 002289 765 IEGIVP-------------------------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG 813 (941)
Q Consensus 765 ~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG 813 (941)
...... ........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 000000 0011124699999999999999999999999999999999999
Q ss_pred CCCCCCCc
Q 002289 814 MQPISHGK 821 (941)
Q Consensus 814 ~~Pf~~~~ 821 (941)
+.||....
T Consensus 236 ~~Pf~~~~ 243 (364)
T cd05599 236 YPPFCSDN 243 (364)
T ss_pred CCCCCCCC
Confidence 99997543
No 75
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.3e-38 Score=351.93 Aligned_cols=195 Identities=26% Similarity=0.344 Sum_probs=167.6
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
+.||+|+||.||++... +|+.||+|+++.... .....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999964 689999999875321 22346778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 691 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 691 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
+|.+++.... .+++..++.++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~----- 150 (325)
T cd05594 81 ELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG----- 150 (325)
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-----
Confidence 9999886543 58899999999999999999997 67 9999999999999999999999999987532111
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~ 200 (325)
T cd05594 151 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 200 (325)
T ss_pred --cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC
Confidence 11233468999999999999999999999999999999999999996543
No 76
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.4e-38 Score=354.48 Aligned_cols=208 Identities=26% Similarity=0.365 Sum_probs=175.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||+||+|... +++.||+|++..... .....+.+|+.++++++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999865 689999999875322 22346788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 9999999999997543 5889999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCc----------------------------cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCC
Q 002289 765 IEGI----------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816 (941)
Q Consensus 765 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~P 816 (941)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0000 000011245799999999999999999999999999999999999999
Q ss_pred CCCCc
Q 002289 817 ISHGK 821 (941)
Q Consensus 817 f~~~~ 821 (941)
|....
T Consensus 236 f~~~~ 240 (363)
T cd05628 236 FCSET 240 (363)
T ss_pred CCCCC
Confidence 97543
No 77
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.2e-38 Score=357.77 Aligned_cols=261 Identities=21% Similarity=0.298 Sum_probs=202.1
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4568999999999999999999975 68999999986422 1223457789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||+++|+|.+++... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999998653 3778888899999999999999999 99999999999999999999999999976532
Q ss_pred CCCCCccccccccccccCCCcccccccccC----CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchh
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 838 (941)
.. ........||+.|+|||++.+. .++.++|||||||++|||++|+.||........ .. .
T Consensus 195 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~---------~ 258 (370)
T cd05596 195 NG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YS---------K 258 (370)
T ss_pred CC------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH-HH---------H
Confidence 21 1112345689999999998753 478899999999999999999999975432111 00 0
Q ss_pred hhcCC-CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCC--CCCCccC
Q 002289 839 VIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET--PPSSSSM 915 (941)
Q Consensus 839 ~~~~~-~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~--R~sa~e~ 915 (941)
+.... ...++. .......+.+||.+||+.+|++ |+|++|+
T Consensus 259 i~~~~~~~~~~~-------------------------------------~~~~s~~~~~li~~~L~~~p~r~~R~s~~el 301 (370)
T cd05596 259 IMDHKNSLTFPD-------------------------------------DIEISKQAKDLICAFLTDREVRLGRNGVDEI 301 (370)
T ss_pred HHcCCCcCCCCC-------------------------------------cCCCCHHHHHHHHHHccChhhccCCCCHHHH
Confidence 00000 000000 0011233456788888878877 8899999
Q ss_pred CCCCCCCCCCC
Q 002289 916 LKHPYVSSDVS 926 (941)
Q Consensus 916 L~Hpwf~~~~~ 926 (941)
++||||++..+
T Consensus 302 l~h~~~~~~~~ 312 (370)
T cd05596 302 KSHPFFKNDQW 312 (370)
T ss_pred hcCcccCCCCh
Confidence 99999887554
No 78
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6e-38 Score=355.17 Aligned_cols=205 Identities=22% Similarity=0.317 Sum_probs=174.6
Q ss_pred HHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcE
Q 002289 605 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 605 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 680 (941)
....++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 334578999999999999999999975 58899999986422 12234678899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|...
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceec
Confidence 9999999999999999643 3788889999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCC----CCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.... ........||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 193 ~~~~------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~ 251 (370)
T cd05621 193 DETG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251 (370)
T ss_pred ccCC------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence 3221 11123456999999999997643 7889999999999999999999997543
No 79
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.6e-37 Score=351.44 Aligned_cols=290 Identities=23% Similarity=0.313 Sum_probs=211.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCC-----
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 678 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 678 (941)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999964 68999999986432 233457889999999999999999999885443
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 679 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 679 -~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
..++||||++ ++|.+.++. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCc
Confidence 4799999996 567776642 3778889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
+..... .......||..|+|||++.+..++.++||||+||++|||++|+.||........+...
T Consensus 171 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~-------- 234 (359)
T cd07876 171 RTACTN--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV-------- 234 (359)
T ss_pred cccccC--------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--------
Confidence 754221 1123346889999999999999999999999999999999999999765443222111
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHH--HhHhhCCCCCCCCcccccccCCCCCCCCCCCcc
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELE--SIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 914 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~~~L~--~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 914 (941)
+ ...+..+.+....+...........|... .+..+...... .........++...+||.+||..||++|+|++|
T Consensus 235 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 311 (359)
T cd07876 235 --I-EQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDE 311 (359)
T ss_pred --H-HhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHH
Confidence 0 11122233333333333333333333222 12222111000 000000112345678999999999999999999
Q ss_pred CCCCCCCCC
Q 002289 915 MLKHPYVSS 923 (941)
Q Consensus 915 ~L~Hpwf~~ 923 (941)
+|+||||..
T Consensus 312 ~l~hp~~~~ 320 (359)
T cd07876 312 ALRHPYITV 320 (359)
T ss_pred HhcCchhhh
Confidence 999999964
No 80
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=8.2e-38 Score=352.81 Aligned_cols=258 Identities=28% Similarity=0.416 Sum_probs=196.7
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
+|+..++||+|+||+||+|++. +++.||||++..... ...+.+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 3455788999999999999965 689999999865432 23467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++|+|.+.. ...+..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--- 222 (353)
T PLN00034 155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--- 222 (353)
T ss_pred CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc---
Confidence 999986532 2456778889999999999999999 9999999999999999999999999998653211
Q ss_pred ccccccccccccCCCccccccccc-----CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||..... ..+
T Consensus 223 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-~~~---------------- 281 (353)
T PLN00034 223 ----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-GDW---------------- 281 (353)
T ss_pred ----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-ccH----------------
Confidence 11233468999999998743 2345689999999999999999999963221 000
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
..++.......+...+ ........+||.+||..||++|+|++|+|+||||.
T Consensus 282 -------------~~~~~~~~~~~~~~~~----------------~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~ 332 (353)
T PLN00034 282 -------------ASLMCAICMSQPPEAP----------------ATASREFRHFISCCLQREPAKRWSAMQLLQHPFIL 332 (353)
T ss_pred -------------HHHHHHHhccCCCCCC----------------CccCHHHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence 0000000000110111 11122345788889999999999999999999998
Q ss_pred CCCCCCc
Q 002289 923 SDVSGSN 929 (941)
Q Consensus 923 ~~~~~~~ 929 (941)
......+
T Consensus 333 ~~~~~~~ 339 (353)
T PLN00034 333 RAQPGQG 339 (353)
T ss_pred cCCcccc
Confidence 8765433
No 81
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.9e-38 Score=349.69 Aligned_cols=238 Identities=24% Similarity=0.394 Sum_probs=186.7
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHH---HhcCCCceeeeeeccccCCcEEEE
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFL---SRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
|++.+.||+|+||.||+|... +++.||||+++.... ...+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667889999999999999965 689999999875321 1234566666654 566899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||+++|+|..+++. ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988854 35899999999999999999999999 999999999999999999999999998743211
Q ss_pred CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... +.... +.. .
T Consensus 155 -------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-~~~~~---------i~~-~ 216 (324)
T cd05589 155 -------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-EVFDS---------IVN-D 216 (324)
T ss_pred -------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-HHHHH---------HHh-C
Confidence 11223456899999999999999999999999999999999999999754321 11110 111 1
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPS 872 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs 872 (941)
...+|...+..+.+++.+|++.+|.+||+
T Consensus 217 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 245 (324)
T cd05589 217 EVRYPRFLSREAISIMRRLLRRNPERRLG 245 (324)
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHhHcCC
Confidence 12234444556666777777777777764
No 82
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.3e-38 Score=350.06 Aligned_cols=192 Identities=26% Similarity=0.394 Sum_probs=166.8
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|..+++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999965 689999999975322 2234578899999988 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------ 149 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP------ 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC------
Confidence 9999988654 35899999999999999999999999 999999999999999999999999998742211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCC
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~ 818 (941)
........||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 150 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred -CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 112234568999999999999999999999999999999999999995
No 83
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=338.23 Aligned_cols=250 Identities=26% Similarity=0.386 Sum_probs=213.4
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh-hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
...|+..+.||+|.||.||+|.+. .++.||+|++..+.... .+++.+|+.++.+++++||.++|+.|..+..++++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 446777899999999999999964 68999999998654443 4678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
||.||++.+.++... .+.+.....|.++++.|+.|||+++ .+|||||+.|||+..+|.+|++|||.+.......
T Consensus 92 y~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~- 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV- 165 (467)
T ss_pred HhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh-
Confidence 999999999996443 3477778889999999999999999 9999999999999999999999999997664322
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......||+.|||||++.+..|+.|+||||||++.+||.+|..|+..... +..++.+-....+
T Consensus 166 ------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----------mrvlflIpk~~PP 229 (467)
T KOG0201|consen 166 ------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP----------MRVLFLIPKSAPP 229 (467)
T ss_pred ------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc----------ceEEEeccCCCCC
Confidence 222567899999999999998999999999999999999999999975443 2233444444445
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
.+...+...+.+++..|+.++|+.||++.+++++
T Consensus 230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 5666788889999999999999999999999864
No 84
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.6e-38 Score=356.22 Aligned_cols=207 Identities=22% Similarity=0.317 Sum_probs=173.6
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
.|+..+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788999999999999999964 689999999875332 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++++||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999999996543 4788899999999999999999999 99999999999999999999999999864321100
Q ss_pred CCc----------------------------------------cccccccccccCCCcccccccccCCCCchhHhHHHHH
Q 002289 766 EGI----------------------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 805 (941)
Q Consensus 766 ~~~----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ 805 (941)
... ..........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 000 0000112356999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCc
Q 002289 806 VFLELLTGMQPISHGK 821 (941)
Q Consensus 806 ll~elltG~~Pf~~~~ 821 (941)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (381)
T cd05626 237 ILFEMLVGQPPFLAPT 252 (381)
T ss_pred HHHHHHhCCCCCcCCC
Confidence 9999999999997543
No 85
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.2e-37 Score=347.35 Aligned_cols=200 Identities=23% Similarity=0.367 Sum_probs=170.5
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCC-CceeeeeeccccCCcEEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~LV~ 684 (941)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|.++++.++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999975 57899999987532 1233567889999999976 56889999999899999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 9999999999986543 4788999999999999999999999 999999999999999999999999998643211
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
........||..|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 155 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (324)
T cd05587 155 ------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 205 (324)
T ss_pred ------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 112234568999999999999999999999999999999999999997543
No 86
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.4e-38 Score=358.35 Aligned_cols=208 Identities=25% Similarity=0.338 Sum_probs=173.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47889999999999999999864 78999999886432 122356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999654 35888899999999999999999999 9999999999999999999999999996432110
Q ss_pred CCC----------ccc------------------------------cccccccccCCCcccccccccCCCCchhHhHHHH
Q 002289 765 IEG----------IVP------------------------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLG 804 (941)
Q Consensus 765 ~~~----------~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG 804 (941)
... ... ........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 000 000 0000124699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCc
Q 002289 805 VVFLELLTGMQPISHGK 821 (941)
Q Consensus 805 ~ll~elltG~~Pf~~~~ 821 (941)
|++|||++|+.||....
T Consensus 236 vil~elltG~~Pf~~~~ 252 (377)
T cd05629 236 AIMFECLIGWPPFCSEN 252 (377)
T ss_pred hhhhhhhcCCCCCCCCC
Confidence 99999999999996543
No 87
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=330.09 Aligned_cols=200 Identities=29% Similarity=0.465 Sum_probs=180.4
Q ss_pred hcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhhH---hHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
..+|++.+.||+|.||.|-+|.. ..|+.||||.++.....+++ .+.+|+++|+.++||||+.++.+|...+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 45677888999999999999996 57999999999876665554 468999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||..+|.|+|++.+.+ .+++.+.+.+++||..|+.|+|+++ ++|||||.+|||+|.++++||+|||++..+..
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 99999999999997654 4899999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCccccccccccccCCCcccccccccCCCC-chhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......+|++-|.+||.+.|.+|. +.+|-||+||+||.++.|..||+..
T Consensus 206 -------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~ 256 (668)
T KOG0611|consen 206 -------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR 256 (668)
T ss_pred -------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc
Confidence 3445678899999999999998885 5799999999999999999999753
No 88
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.2e-38 Score=355.96 Aligned_cols=208 Identities=26% Similarity=0.342 Sum_probs=177.7
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||+||+|+.. +++.||+|+++.... .....+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47889999999999999999975 689999999875321 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999765 45889999999999999999999998 9999999999999999999999999997654322
Q ss_pred CC----------------------CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IE----------------------GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~----------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.. ............||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 00 0000112234568999999999999999999999999999999999999997544
No 89
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.9e-37 Score=333.17 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=208.2
Q ss_pred hcCCCccceeeccCcEEEEEEEeC----CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
.++|++.+.||+|+||.||+|.++ .+..||+|+++.... .....+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 457888999999999999999853 357899999886433 234578899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ ++||||||+||+++.++.++++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999997543 35889999999999999999999999 99999999999999999999999998764321
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
.. ........++..|+|||++.+..++.++|||||||++||+++ |+.||...... +... .+.+
T Consensus 160 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-~~~~---------~~~~ 223 (266)
T cd05064 160 EA------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-DVIK---------AVED 223 (266)
T ss_pred cc------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HHHH---------HHHC
Confidence 11 011112335678999999999999999999999999999875 99999754321 1111 1122
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
+.....+..++..+.+++.+||+.+|++||++.++.+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 224 GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 223344566778899999999999999999999999988754
No 90
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.6e-38 Score=341.12 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=218.7
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCCc-EEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-QMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-~~LV~ 684 (941)
++|...+++|+|+||.++..+.+ +++.+|+|.+...... .+....+|+.++++++|||||.+.+.+..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888999999999999998865 6789999988754433 23468899999999999999999999999988 99999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
+|++||++.+.+.++....+++..+..++.|++.|+.|||++. |+|||||+.||+++.+..|||+|||+|+.+...+
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998877778999999999999999999999888 9999999999999999999999999999876532
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.....+.||+.||.||.+.+.+|..|+||||+||++|||++-+.+|...+- ...+ .++.....
T Consensus 161 -------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-~~Li---------~ki~~~~~ 223 (426)
T KOG0589|consen 161 -------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-SELI---------LKINRGLY 223 (426)
T ss_pred -------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-HHHH---------HHHhhccC
Confidence 234567899999999999999999999999999999999999999965432 2222 23333445
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
.+.|..+..++..++..|++.+|+.||++.+++.+
T Consensus 224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 67788999999999999999999999999999876
No 91
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.2e-37 Score=349.64 Aligned_cols=290 Identities=20% Similarity=0.295 Sum_probs=212.5
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccC------
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 677 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 677 (941)
..++|++.+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999965 68899999987532 23345788999999999999999999987543
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
...++||||++ ++|.+.+.. .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999995 578877743 3778889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
+..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........+...
T Consensus 174 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~-------- 237 (364)
T cd07875 174 RTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV-------- 237 (364)
T ss_pred cccCCC--------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH--------
Confidence 764321 1123346889999999999999999999999999999999999999765543322111
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHH-HHh-HhhCCCCCCCCcccccccCCCCCCCCCCCcc
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMREL-ESI-WNMMPESDTKTPEFINSEHTSKEETPPSSSS 914 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~~~L-~~~-~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 914 (941)
+. ..+....+....+...+.......|... ..+.++.... ... ..........+.+||.+||+.||++|||++|
T Consensus 238 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e 314 (364)
T cd07875 238 --IE-QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314 (364)
T ss_pred --HH-hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence 11 1122233444444333333333222211 1122111100 000 0001112345578999999999999999999
Q ss_pred CCCCCCCCC
Q 002289 915 MLKHPYVSS 923 (941)
Q Consensus 915 ~L~Hpwf~~ 923 (941)
+|+||||..
T Consensus 315 ~L~hp~~~~ 323 (364)
T cd07875 315 ALQHPYINV 323 (364)
T ss_pred HhcCccccc
Confidence 999999964
No 92
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=310.82 Aligned_cols=267 Identities=25% Similarity=0.372 Sum_probs=213.7
Q ss_pred HhcCCCccceeeccCcEEEEEEE-eCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccC-----CcE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 680 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 680 (941)
..++|++.+.||+|||+-||.++ ..+++.+|+|++.....++.+..++|++..++++||||++++++...+ .+.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 46789999999999999999999 568899999999987777888999999999999999999999998443 358
Q ss_pred EEEEecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 681 MLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
||+++|+..|||.+.++.. .+..+++.++++|+.+|++||++||+.. ++++||||||.|||+.+++.+++.|||.++
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999998753 3446999999999999999999999986 689999999999999999999999999987
Q ss_pred ccCCCCCCCc--cccccccccccCCCccccccccc---CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhh
Q 002289 759 LAPVPDIEGI--VPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833 (941)
Q Consensus 759 ~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~ 833 (941)
...-.-.+.. ..-+.......|..|+|||.+.- ...++++|||||||++|+|+.|..||+.... +.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---------~G 248 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---------QG 248 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---------cC
Confidence 6542211100 00112244568999999999863 5678999999999999999999999963211 11
Q ss_pred ccc-hhhhcCCCC-CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 834 SMM-FSVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 834 ~~~-~~~~~~~~~-~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
+.+ ..+..+... +-...+++.+.++++.|++.||.+||+..+++..++..
T Consensus 249 gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 249 GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111 111221111 11123788999999999999999999999999887754
No 93
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.8e-37 Score=337.60 Aligned_cols=261 Identities=27% Similarity=0.431 Sum_probs=203.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC-----------------CcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceee
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVS 669 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~ 669 (941)
.++|.+.++||+|+||.||+|.+++ +..||+|.+...... ..+++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4678889999999999999998532 347999998764322 3567999999999999999999
Q ss_pred eeeccccCCcEEEEEecCCCCCHHHHHhhcC-----------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 002289 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS-----------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732 (941)
Q Consensus 670 l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 732 (941)
+++++.+.+..++||||+++|+|.+++.... ...+++..+++++.||+.||+|||+.+ |+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence 9999999999999999999999999986432 124678889999999999999999999 99
Q ss_pred eccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh
Q 002289 733 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812 (941)
Q Consensus 733 H~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt 812 (941)
||||||+|||++.++.+||+|||+++.....+. ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence 999999999999999999999999976533221 111223345788999999998899999999999999999997
Q ss_pred --CCCCCCCCchh--HHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 813 --GMQPISHGKNI--VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 813 --G~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
+..||...... .......+.. .........+..++..+.+++.+||+.+|++||++.++.+.|+
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 236 LCKEQPYGELTDEQVIENAGEFFRD-----QGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred ccCCCCCCcCCHHHHHHHHHHHhhh-----ccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 55677543321 1111111100 0001111234456678999999999999999999999988775
No 94
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-37 Score=323.62 Aligned_cols=261 Identities=23% Similarity=0.370 Sum_probs=203.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhc--CCCceeeeeeccccC----CcEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEE----GEQM 681 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~----~~~~ 681 (941)
..+..+.+.||+|.||.||+|.| .|..||||++.. .+++.+.+|.++++.. +|+||+.|++.-..+ .+.+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 45677789999999999999999 578999999974 3456788899988874 999999999987443 3789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-----CCCCCeEeccCCCCcEEEcCCCcEEEeeecc
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-----EADPPVFHRDIKASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~ivH~DLkp~NILl~~~~~~kl~DFGl 756 (941)
||++|.+.|||+|+|.+ ..++....++++..+|.||+|||. +|+|.|.|||||+.||||..++.+.|+|+|+
T Consensus 286 LvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 99999999999999965 458999999999999999999994 6888999999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccccCCCcccccccccCC----C--CchhHhHHHHHHHHHHHhC----------CCCCCCC
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----L--TDKSDVYSLGVVFLELLTG----------MQPISHG 820 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~sDVwSlG~ll~elltG----------~~Pf~~~ 820 (941)
|......... . .-.....+||.+|||||++...- + -..+||||||.++||+..+ +.||.+.
T Consensus 363 Av~h~~~t~~--i-di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 363 AVRHDSDTDT--I-DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred eEEecccCCc--c-cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 9876543211 1 22334567999999999986431 1 2369999999999999874 4566432
Q ss_pred ---chhHHHHHHHHhhccchhhhcCCCCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 821 ---KNIVREVNIAYQSSMMFSVIDGNMGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 821 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
+...+..+..+- ++..++.+ ..++...+.++|+.||..+|..|-++-.+.+.+.++.+
T Consensus 440 Vp~DPs~eeMrkVVC-------v~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVC-------VQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCHHHHhccee-------ecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 111222211111 11222222 35677889999999999999999999999888887754
No 95
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4e-37 Score=331.88 Aligned_cols=256 Identities=25% Similarity=0.438 Sum_probs=210.5
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..++|++.++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 3567889999999999999999988888999998875332 346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.++++......+++..++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++.......
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY- 158 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence 99999999997765567889999999999999999999998 99999999999999999999999999986533211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||....... . ..... .....
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-~-~~~~~--------~~~~~ 223 (261)
T cd05072 159 -----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-V-MSALQ--------RGYRM 223 (261)
T ss_pred -----eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-H-HHHHH--------cCCCC
Confidence 11122345678999999998889999999999999999998 999996543211 1 11111 11111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
+....++..+.+++.+|+..+|++||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2233456778999999999999999999999998875
No 96
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-37 Score=351.67 Aligned_cols=289 Identities=20% Similarity=0.295 Sum_probs=202.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
...+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++|+||+++++++...+..++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4467999999999999999999975 5789999975432 34568999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+ .++|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~-~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 138 HY-SSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred cc-CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99 578998886543 45899999999999999999999999 999999999999999999999999998743211
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC---
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG--- 842 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--- 842 (941)
.......||..|+|||++.+..++.++|||||||++|||+++..|+..................+..++..
T Consensus 211 ------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~ 284 (357)
T PHA03209 211 ------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKV 284 (357)
T ss_pred ------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhcc
Confidence 11233568999999999999999999999999999999999766654322111000000000011111100
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
....++.+.... +....+......|..... ...++. ........+||.+||++||++||||+|+|+||||+
T Consensus 285 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~ 355 (357)
T PHA03209 285 HPEEFPRDPGSR---LVRGFIEYASLERQPYTR-YPCFQR-----VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA 355 (357)
T ss_pred ChhhcCCCCccH---HHHHHHhhcccCCCcccc-cHHHhc-----cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence 000011000000 111111111111111100 000110 12334556799999999999999999999999997
Q ss_pred C
Q 002289 923 S 923 (941)
Q Consensus 923 ~ 923 (941)
+
T Consensus 356 ~ 356 (357)
T PHA03209 356 Q 356 (357)
T ss_pred c
Confidence 5
No 97
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.3e-37 Score=343.44 Aligned_cols=279 Identities=23% Similarity=0.342 Sum_probs=204.9
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|+.. +++.||||+++.... ...+.+..|..+++.. +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 578999999875321 2234566778887764 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 150 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD----- 150 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-----
Confidence 9999999654 34788899999999999999999999 9999999999999999999999999987432211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
.......||..|+|||++.+..++.++||||+||++|||++|+.||...... +.... +......++.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~----------i~~~~~~~~~ 217 (316)
T cd05619 151 --AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-ELFQS----------IRMDNPCYPR 217 (316)
T ss_pred --CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-HHHHH----------HHhCCCCCCc
Confidence 1123456899999999999999999999999999999999999999754321 11111 1111122334
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCC
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMS-EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~-~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~ 925 (941)
.....+.+++.+|++.+|++||++. ++.++ .+ +...+ ...+. -..++|.-++...+...+.||....
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h--~~---~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIRQH--PF---FREID---WSALE-EREIEPPFKPKVKSANDCSNFDKEF 285 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHHcC--cc---cCCCC---HHHHH-hCCCCCCcCCCCCCccchhhcChhh
Confidence 4455667777788888888887775 33211 01 11100 00111 1234566677777777777775543
No 98
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.2e-37 Score=358.21 Aligned_cols=279 Identities=22% Similarity=0.337 Sum_probs=200.1
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccC--------C
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------G 678 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--------~ 678 (941)
..+|++.+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++|+||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999964 68999999885422 2345799999999999999998876321 2
Q ss_pred cEEEEEecCCCCCHHHHHhh--cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-cEEEeeec
Q 002289 679 EQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFG 755 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-~~kl~DFG 755 (941)
..++||||++ ++|.+++.. .....+++..++.++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 4679999996 588777753 23456899999999999999999999999 99999999999999665 79999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhc
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 834 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~ 834 (941)
+|+..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||............ .
T Consensus 217 la~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i-~--- 284 (440)
T PTZ00036 217 SAKNLLAG--------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRI-I--- 284 (440)
T ss_pred cchhccCC--------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-H---
Confidence 99865321 112334688999999998764 6899999999999999999999999765432211111 0
Q ss_pred cchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC-CCCCCCcccccccCCCCCCCCCCCc
Q 002289 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP-ESDTKTPEFINSEHTSKEETPPSSS 913 (941)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~-~~~~~~~dll~~~L~~dP~~R~sa~ 913 (941)
.. .+..+.+....+..-. .-. .-|...+ .++ ...++ ...+++.+||.+||++||++|+||.
T Consensus 285 ---~~----~~~p~~~~~~~~~~~~-~~~-~~~~~~~--~~l-------~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~ 346 (440)
T PTZ00036 285 ---QV----LGTPTEDQLKEMNPNY-ADI-KFPDVKP--KDL-------KKVFPKGTPDDAINFISQFLKYEPLKRLNPI 346 (440)
T ss_pred ---HH----hCCCCHHHHHHhchhh-hcc-cCCccCc--hhH-------HHHhccCCCHHHHHHHHHHCCCChhHCcCHH
Confidence 00 0111111111000000 000 0010000 111 11122 2345678999999999999999999
Q ss_pred cCCCCCCCCCC
Q 002289 914 SMLKHPYVSSD 924 (941)
Q Consensus 914 e~L~Hpwf~~~ 924 (941)
|+|+||||..-
T Consensus 347 e~l~hp~f~~~ 357 (440)
T PTZ00036 347 EALADPFFDDL 357 (440)
T ss_pred HHhCChhHHhh
Confidence 99999999753
No 99
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.7e-38 Score=347.80 Aligned_cols=194 Identities=28% Similarity=0.421 Sum_probs=164.6
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHH-HHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||+||+|+.. +|+.||+|++..... ...+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 689999999874322 12234555554 56789999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (323)
T cd05575 81 GELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH------ 149 (323)
T ss_pred CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC------
Confidence 99999986543 5888999999999999999999999 999999999999999999999999998743211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 199 (323)
T cd05575 150 -SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (323)
T ss_pred -CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999653
No 100
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-38 Score=338.62 Aligned_cols=262 Identities=30% Similarity=0.432 Sum_probs=217.0
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh-hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
......+.++||+|-||.|..+....+..||||+++...... +++|.+|+++|.+++||||++++|+|..++.+++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 445667789999999999999999888999999999766554 5899999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
||++|+|.+++.++............|+.||+.||+||.+.+ +|||||.++|+|++.++++||+|||+++.+-..+.
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc
Confidence 999999999998775444566667789999999999999999 99999999999999999999999999996654443
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh--CCCCCCCCchhHHHHHHHHhhccchhhhcC-
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPISHGKNIVREVNIAYQSSMMFSVIDG- 842 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt--G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~- 842 (941)
+ +......-.++|||+|.+.-++++.++|||+||+++||+++ ...||....+..- ++ ....+++.
T Consensus 693 y-----~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-ve------n~~~~~~~~ 760 (807)
T KOG1094|consen 693 Y-----RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-VE------NAGEFFRDQ 760 (807)
T ss_pred e-----eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-HH------hhhhhcCCC
Confidence 2 22223344579999999999999999999999999999887 6788865433111 00 11111221
Q ss_pred C---CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 843 N---MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 843 ~---~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
. ....|.-|+..+++++..||..+.++||+++++...|++.
T Consensus 761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1 2345778999999999999999999999999999888753
No 101
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.8e-37 Score=339.33 Aligned_cols=258 Identities=23% Similarity=0.353 Sum_probs=204.4
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
.|+..+.||+|+||+||++... +++.||+|.+...... ..+.+.+|+.++++++|++|+++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999975 6899999988653222 23457789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999999987655566899999999999999999999998 9999999999999999999999999987543211
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
......|+..|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~------------------- 210 (285)
T cd05630 157 -------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR------------------- 210 (285)
T ss_pred -------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-------------------
Confidence 112346899999999999999999999999999999999999999643221100
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC-----CccCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKHPY 920 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s-----a~e~L~Hpw 920 (941)
+. ...+... .+. .......+...+|+++||+.||++|+| ++|+++|||
T Consensus 211 ----~~---~~~~~~~----~~~----------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 211 ----EE---VERLVKE----VQE----------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred ----HH---HHhhhhh----hhh----------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 00 0000000 000 000112233457888999999999999 899999999
Q ss_pred CCCC
Q 002289 921 VSSD 924 (941)
Q Consensus 921 f~~~ 924 (941)
|..-
T Consensus 264 ~~~~ 267 (285)
T cd05630 264 FKQI 267 (285)
T ss_pred hhcc
Confidence 9764
No 102
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=8e-38 Score=356.82 Aligned_cols=207 Identities=22% Similarity=0.309 Sum_probs=173.3
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
+|++.++||+|+||+||+|+.. +++.||+|++..... .....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999964 688999999875322 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++|+|.+++.+.. .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 999999999996543 4788889999999999999999999 99999999999999999999999999853321000
Q ss_pred CC----------------------------------------ccccccccccccCCCcccccccccCCCCchhHhHHHHH
Q 002289 766 EG----------------------------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 805 (941)
Q Consensus 766 ~~----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ 805 (941)
.. ...........||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00 00000112346899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCc
Q 002289 806 VFLELLTGMQPISHGK 821 (941)
Q Consensus 806 ll~elltG~~Pf~~~~ 821 (941)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (382)
T cd05625 237 ILYEMLVGQPPFLAQT 252 (382)
T ss_pred HHHHHHhCCCCCCCCC
Confidence 9999999999997543
No 103
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=341.71 Aligned_cols=265 Identities=29% Similarity=0.478 Sum_probs=227.2
Q ss_pred hHHHHHHhcCCCccceeeccCcEEEEEEEeCC-CcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCc
Q 002289 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 679 (941)
Q Consensus 601 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 679 (941)
+++|+....+....++||-|-||.||.|.|+. .-.||||.++.+.++ .++|+.|..+|+.++|||+|+++|+|..+-.
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 46777777778889999999999999999974 678999999986554 4589999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
+|||+|||..|+|.++|++..+..++....+.++.||+.||+||..++ +|||||.++|+|+.++..+||+|||++++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhh
Confidence 999999999999999999888888888899999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchh
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 838 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~ 838 (941)
+..+.+++. ....-.+-|.|||-+....++.|+|||+|||+|||+.| |..||...+- . ..+.
T Consensus 415 MtgDTYTAH------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-S----------qVY~ 477 (1157)
T KOG4278|consen 415 MTGDTYTAH------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-S----------QVYG 477 (1157)
T ss_pred hcCCceecc------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-H----------HHHH
Confidence 865543321 11123467999999999999999999999999999999 8888865331 1 1122
Q ss_pred hh-cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 839 VI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 839 ~~-~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
++ .+.+..-|+.|++.++++|..||+..|.+||++.|+-+.++.++..
T Consensus 478 LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 478 LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 22 2344567899999999999999999999999999999999877653
No 104
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.4e-37 Score=333.38 Aligned_cols=250 Identities=37% Similarity=0.596 Sum_probs=199.9
Q ss_pred ccceeeccCcEEEEEEEeC-----CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 613 SSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 613 ~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+.+.||.|.||.||+|.+. .+..|+||.++..... ..+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999976 2578999999764333 367899999999999999999999999988889999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++|+|.++++......+++..++.|+.||++||+|||+++ ++|+||+++||++++++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc-
Confidence 99999999998875667999999999999999999999998 99999999999999999999999999986522111
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
............|+|||.+.+..++.++||||||+++|||++ |+.||..... .+... .+.++...
T Consensus 159 ----~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~~~~~---------~~~~~~~~ 224 (259)
T PF07714_consen 159 ----YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-EEIIE---------KLKQGQRL 224 (259)
T ss_dssp ----EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-HHHHH---------HHHTTEET
T ss_pred ----ccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccc---------cccccccc
Confidence 122233446678999999999999999999999999999999 7788865532 22111 12222333
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
..+..++..+.+++..||+.+|++||++.++++.|
T Consensus 225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 45566788899999999999999999999998865
No 105
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.4e-37 Score=338.82 Aligned_cols=277 Identities=25% Similarity=0.375 Sum_probs=201.4
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhc---CCCceeeeeecccc-----CC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDE-----EG 678 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~-----~~ 678 (941)
+|++.+.||+|+||+||+|... +++.||+|.++..... ....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5888999999999999999965 6899999988753222 123566777777665 69999999998754 34
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
..++||||++ ++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccc
Confidence 5799999996 59999987665556899999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchh
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 838 (941)
...... ......||..|+|||++.+..++.++||||+||++|||++|+.||........ ......
T Consensus 157 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~-~~~~~~------ 221 (288)
T cd07863 157 IYSCQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFD------ 221 (288)
T ss_pred cccCcc--------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH-HHHHHH------
Confidence 653211 12234578899999999999999999999999999999999999865443211 111100
Q ss_pred hhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 839 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
.+.. .....+... ....... ..+..... +....+..+....+++.+||..||++|+|++|++.|
T Consensus 222 ~~~~---~~~~~~~~~-~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 222 LIGL---PPEDDWPRD-VTLPRGA--FSPRGPRP----------VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred HhCC---CChhhCccc-ccccccc--cCCCCCCc----------hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 000000000 0000000 00101111 111223344455789999999999999999999999
Q ss_pred CCC
Q 002289 919 PYV 921 (941)
Q Consensus 919 pwf 921 (941)
|||
T Consensus 286 p~f 288 (288)
T cd07863 286 PFF 288 (288)
T ss_pred CCC
Confidence 998
No 106
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=356.03 Aligned_cols=266 Identities=23% Similarity=0.360 Sum_probs=217.8
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCCC-cEEEEEEeccCCchhhHhHHHHHHHHHhcC-CCceeeeeec-ccc------C
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGY-CDE------E 677 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~-~~~------~ 677 (941)
...++++.+.|.+|||+.||.|.+..+ ..||+|++-..+....+.+.+|+++|+.|+ |+|||.+++. ... .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 345667789999999999999998765 999999988777777788999999999996 9999999993 211 2
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
-+.+|.||||+||+|-|++..+-...|++.++++|+.|+++|+++||... +||||||||-+|||++.++..||||||.|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccc
Confidence 37789999999999999998765556999999999999999999999874 88999999999999999999999999998
Q ss_pred cccCCCC--CCCccccccccccccCCCccccccc---ccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHh
Q 002289 758 RLAPVPD--IEGIVPAHVSTVVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 832 (941)
Q Consensus 758 ~~~~~~~--~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~ 832 (941)
....... ..+...-........|+.|+|||.+ .+..+++|+|||||||+||-|+..+.||+....
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 7432211 0010001112234578999999987 467899999999999999999999999986532
Q ss_pred hccchhhhcCCCCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002289 833 SSMMFSVIDGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887 (941)
Q Consensus 833 ~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 887 (941)
..++.+.....+ +.++..+..+|..|++.+|.+||++.+|+..+.++....
T Consensus 264 ----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 264 ----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 234555443322 589999999999999999999999999999998876643
No 107
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.2e-37 Score=343.74 Aligned_cols=194 Identities=26% Similarity=0.411 Sum_probs=165.5
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|+.. +|+.||+|+++.... ...+.+..|.+++... +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999975 689999999875321 2234566788877754 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 149 (316)
T cd05620 81 GDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG------ 149 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC------
Confidence 99999986543 4788899999999999999999999 999999999999999999999999998743211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
........||..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 150 -DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred -CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999644
No 108
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-38 Score=293.50 Aligned_cols=283 Identities=25% Similarity=0.399 Sum_probs=219.7
Q ss_pred CCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|...++||+|.||+||+|+. ++++.||+|++..+.. .-.....+|+-+++.++|.|||++++....++..-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 466678999999999999995 4689999998875332 2246789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
| ..+|..+...-. ..++.+.++.++.|+++||.|+|+++ +.|||+||.|.|++.+|+.|++|||+|+-+..+
T Consensus 83 c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgip--- 154 (292)
T KOG0662|consen 83 C-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIP--- 154 (292)
T ss_pred h-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCc---
Confidence 9 568988886543 35889999999999999999999999 999999999999999999999999999876432
Q ss_pred CccccccccccccCCCcccccccccCC-CCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.+......-|..|++|.++.+.+ |+...|+||-||++.|+.....|.+++.+..++....+..- +
T Consensus 155 ----vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~l----------g 220 (292)
T KOG0662|consen 155 ----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL----------G 220 (292)
T ss_pred ----eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHh----------C
Confidence 34455567889999999998854 88999999999999999997778777877777766554321 1
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 924 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~ 924 (941)
...++.++.+.++ .|..--|.+... ..+.+..|.......|+++++|.-+|..|++|+++|+||||+..
T Consensus 221 ~p~ed~wps~t~l------pdyk~yp~ypat----tswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 221 TPTEDQWPSMTKL------PDYKPYPIYPAT----TSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred CCccccCCccccC------CCCcccCCcccc----chHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 1111112211111 111111222111 12233345555666799999999999999999999999999764
No 109
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.9e-37 Score=347.53 Aligned_cols=261 Identities=25% Similarity=0.408 Sum_probs=206.6
Q ss_pred HHHhcCCCccceeeccCcEEEEEEEe------CCCcEEEEEEeccCC-chhhHhHHHHHHHHHhc-CCCceeeeeecccc
Q 002289 605 ALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 676 (941)
Q Consensus 605 ~~~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 676 (941)
....++|++.+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+++++.+ +||||++++++|..
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 33456788899999999999999973 246689999987533 23346788999999999 89999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 002289 677 EGEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 700 (941)
Q Consensus 677 ~~~~~LV~e~~~~gsL~~~l~~~~-------------------------------------------------------- 700 (941)
.+..++||||+++|+|.++++...
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 999999999999999999986432
Q ss_pred -----------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 701 -----------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 701 -----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 124788899999999999999999998 999999999999999999999999999765332
Q ss_pred CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
.. ........++..|+|||++.+..++.++|||||||++|||++ |..||............ . ..+
T Consensus 268 ~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~-~--------~~~ 333 (375)
T cd05104 268 SN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM-I--------KEG 333 (375)
T ss_pred cc-----ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH-H--------HhC
Confidence 11 011122335678999999999999999999999999999998 88888654322111111 1 111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
.....+...+.++.+++..||+.+|++||++.++++.|++
T Consensus 334 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 334 YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1112233345678999999999999999999999999885
No 110
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.8e-37 Score=347.85 Aligned_cols=265 Identities=25% Similarity=0.391 Sum_probs=208.7
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhc-CCCceeeeeecc
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYC 674 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 674 (941)
.+....++|++.+.||+|+||.||+|++. ++..||||+++.... .....+.+|+++++.+ +|+||++++++|
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 33445678999999999999999999842 345899999975432 2345688999999999 899999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhcC------------------------------------------------------
Q 002289 675 DEEGEQMLVYEFMSNGTLRDQLSAKS------------------------------------------------------ 700 (941)
Q Consensus 675 ~~~~~~~LV~e~~~~gsL~~~l~~~~------------------------------------------------------ 700 (941)
...+..++||||+++|+|.++++...
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999999999999985421
Q ss_pred --------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 701 --------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 701 --------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
..++++..+++++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~- 267 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN- 267 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-
Confidence 124788889999999999999999998 99999999999999999999999999976532211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
........++..|+|||++.+..++.++|||||||++|||++ |+.||............. ..+...
T Consensus 268 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~---------~~~~~~ 334 (374)
T cd05106 268 ----YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV---------KRGYQM 334 (374)
T ss_pred ----eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH---------HcccCc
Confidence 111122335678999999999999999999999999999997 999996543211111110 011111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
..+...+.++.+++.+||+.+|++||++.++++.|+++.
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 223334578899999999999999999999999998753
No 111
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.9e-37 Score=332.99 Aligned_cols=256 Identities=30% Similarity=0.525 Sum_probs=209.7
Q ss_pred cCCCccceeeccCcEEEEEEEeCC------CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
++|++.+.||+|+||.||+|.... ...||+|.++.... .....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999998642 25799999875433 23457899999999999999999999999989999
Q ss_pred EEEecCCCCCHHHHHhhcCC--------------CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC
Q 002289 682 LVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 747 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~ 747 (941)
++|||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999975421 45788999999999999999999999 99999999999999999
Q ss_pred cEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHH
Q 002289 748 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826 (941)
Q Consensus 748 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~ 826 (941)
.+||+|||+++.....+. ........++..|+|||++.+..++.++|||||||++|||++ |..||..... .+.
T Consensus 162 ~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05048 162 TVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-QEV 235 (283)
T ss_pred cEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999975432221 111223346788999999998899999999999999999998 9999975432 111
Q ss_pred HHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 827 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
. ..+..+.....+..++.++.+++.+||+.+|.+||++.++.+.|++
T Consensus 236 ~---------~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 236 I---------EMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred H---------HHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1 1122233344567788999999999999999999999999999875
No 112
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.9e-38 Score=356.65 Aligned_cols=208 Identities=23% Similarity=0.317 Sum_probs=173.7
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
.+|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999964 689999999864321 22356789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999996543 4788889999999999999999999 9999999999999999999999999985332100
Q ss_pred CCC------------------------------------ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHH
Q 002289 765 IEG------------------------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFL 808 (941)
Q Consensus 765 ~~~------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ 808 (941)
... ...........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000 00000112356999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCc
Q 002289 809 ELLTGMQPISHGK 821 (941)
Q Consensus 809 elltG~~Pf~~~~ 821 (941)
||++|+.||....
T Consensus 236 ell~G~~Pf~~~~ 248 (376)
T cd05598 236 EMLVGQPPFLADT 248 (376)
T ss_pred ehhhCCCCCCCCC
Confidence 9999999997543
No 113
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.8e-37 Score=341.77 Aligned_cols=280 Identities=20% Similarity=0.302 Sum_probs=209.1
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|+.. +++.||+|+++.... ...+.+..|.+++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 588999999875321 2233456677776654 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~----- 150 (316)
T cd05592 81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE----- 150 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-----
Confidence 99999986543 4888999999999999999999999 9999999999999999999999999997542211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +... .+......++.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-~~~~----------~i~~~~~~~~~ 217 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-ELFD----------SILNDRPHFPR 217 (316)
T ss_pred --CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-HHHH----------HHHcCCCCCCC
Confidence 1223456899999999999999999999999999999999999999754431 1111 11122333455
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCCC
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMS-EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~-~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~ 926 (941)
.+..++.+++..|++.+|.+||++. +++++ . + +...+ .+.+.+ -+..|.-++.......++||.....
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h-~-~---~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDGDIRQH-P-F---FRGID---WERLEK-REIPPPFKPKVKSPSDASNFDREFT 286 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHHcC-c-c---cCCCC---HHHHHh-CCCCCCcCCCCCCcchhhhcCcccc
Confidence 5667788899999999999999875 33321 0 0 00000 011111 1334555667777777888865444
No 114
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4e-37 Score=331.85 Aligned_cols=257 Identities=29% Similarity=0.497 Sum_probs=216.0
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
....+|++.++||+|+||.||+|...+++.+|+|.+..........+.+|+.+++.++|+||+++++++...+..++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34567889999999999999999988899999999987665556678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~- 158 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV- 158 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcc-
Confidence 999999999998766667899999999999999999999999 9999999999999999999999999997653221
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... +... .+.....
T Consensus 159 ------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~---------~~~~~~~ 222 (261)
T cd05148 159 ------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYD---------QITAGYR 222 (261)
T ss_pred ------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHH---------HHHhCCc
Confidence 11123335678999999998899999999999999999998 89999654321 1111 1112222
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
...+..+++.+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 223 MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 33455677889999999999999999999999999875
No 115
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.3e-37 Score=344.78 Aligned_cols=241 Identities=20% Similarity=0.324 Sum_probs=189.2
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
+|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999975 578999999875322 1234566788888777 5899999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999999986543 4888999999999999999999999 9999999999999999999999999987532211
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... +. ...
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~-~~~~---------i~-~~~ 217 (323)
T cd05616 156 -------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQS---------IM-EHN 217 (323)
T ss_pred -------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH-HHHH---------HH-hCC
Confidence 12234568999999999999999999999999999999999999997544311 1110 11 111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCH
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSM 873 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~ 873 (941)
..+|...+.++.+++.+|++.+|.+|++.
T Consensus 218 ~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 22344445556666666666666666664
No 116
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.1e-36 Score=327.41 Aligned_cols=251 Identities=29% Similarity=0.486 Sum_probs=205.3
Q ss_pred cCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
++|++.+.||+|+||.||+|.++++..+|+|.+..... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 45788899999999999999988888999998875432 34578899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+|+|.++++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--- 155 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce---
Confidence 999999987543 35889999999999999999999999 99999999999999999999999999876532211
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||...... +.... +..+.....
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-~~~~~---------i~~~~~~~~ 222 (256)
T cd05114 156 ---TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-EVVEM---------ISRGFRLYR 222 (256)
T ss_pred ---eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH---------HHCCCCCCC
Confidence 11122335568999999998889999999999999999999 89999754432 11111 111112223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 344556789999999999999999999998865
No 117
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.8e-37 Score=344.50 Aligned_cols=193 Identities=24% Similarity=0.376 Sum_probs=166.9
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||+||+|... +++.||+|+++.... ...+.+.+|+.++.++ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 678999999975432 2234578899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------ 149 (327)
T cd05617 81 GDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP------ 149 (327)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC------
Confidence 99999886543 4899999999999999999999999 999999999999999999999999998743211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 150 -GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred -CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 1122345689999999999999999999999999999999999999953
No 118
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.2e-37 Score=348.37 Aligned_cols=203 Identities=26% Similarity=0.347 Sum_probs=174.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||+||+|... +|+.||+|+++.... ...+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999965 689999999875322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999997642 35899999999999999999999999 9999999999999999999999999998654321
Q ss_pred CCCccccccccccccCCCcccccccc------cCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
........||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 157 ------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 11123346899999999987 4567889999999999999999999997543
No 119
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.4e-37 Score=346.26 Aligned_cols=195 Identities=26% Similarity=0.412 Sum_probs=167.0
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|+.. +++.||+|+++.... ...+.+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999975 588999999875321 2234567888888866 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~----- 150 (321)
T cd05591 81 GDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG----- 150 (321)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC-----
Confidence 99999986543 4888999999999999999999999 9999999999999999999999999987532211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~ 200 (321)
T cd05591 151 --VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200 (321)
T ss_pred --ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence 11234568999999999999999999999999999999999999997544
No 120
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.3e-37 Score=347.35 Aligned_cols=291 Identities=20% Similarity=0.276 Sum_probs=210.1
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccC------
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 677 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 677 (941)
..++|++.+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999864 68999999987532 22345778899999999999999999987543
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
...++||||++ +++.+.+.. .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCccc
Confidence 35799999995 577777643 3788889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
+..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........+....
T Consensus 167 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~------- 231 (355)
T cd07874 167 RTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI------- 231 (355)
T ss_pred ccCCCc--------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------
Confidence 754321 11233468899999999999999999999999999999999999997654332221111
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCC-CCCHHHHH-HHHHHh-HhhCCCCCCCCcccccccCCCCCCCCCCCcc
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDA-RPSMSEVM-RELESI-WNMMPESDTKTPEFINSEHTSKEETPPSSSS 914 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~-RPs~~~v~-~~L~~~-~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 914 (941)
. ..+....++...+......+....|.. +..+.... ..+... ..........+.+||.+||+.||++|||+.|
T Consensus 232 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~e 307 (355)
T cd07874 232 ---E-QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDE 307 (355)
T ss_pred ---H-HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHH
Confidence 1 111122333333333333333222211 00111000 000000 0000112234578999999999999999999
Q ss_pred CCCCCCCCCC
Q 002289 915 MLKHPYVSSD 924 (941)
Q Consensus 915 ~L~Hpwf~~~ 924 (941)
+|+||||..-
T Consensus 308 ll~hp~~~~~ 317 (355)
T cd07874 308 ALQHPYINVW 317 (355)
T ss_pred HhcCcchhcc
Confidence 9999999743
No 121
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.9e-37 Score=351.94 Aligned_cols=286 Identities=20% Similarity=0.239 Sum_probs=207.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeC---CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
..+|.+.+.||+|+||.||++... .++.||+|.+... +...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 3578999987642 24568999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
|++ +++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 166 e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 999 47899988433 45899999999999999999999999 9999999999999999999999999997654322
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchh--HHHHHHHHhhccchhhhcC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI--VREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 842 (941)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..... .+..
T Consensus 240 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~------~~~~ 308 (392)
T PHA03207 240 D-----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIR------CMQV 308 (392)
T ss_pred c-----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHH------Hhcc
Confidence 1 11223456899999999999999999999999999999999999999754321 111111100 0000
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
....++......+.+.. -+.....||...- -..+.. ...+....+||.+||++||++||||.|+|.||||.
T Consensus 309 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~ 379 (392)
T PHA03207 309 HPLEFPQNGSTNLCKHF---KQYAIVLRPPYTI-PPVIRK-----YGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT 379 (392)
T ss_pred CccccCCccchhHHHHH---HhhcccccCCccc-cchhhc-----cCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence 01111211111111111 1112222332210 000000 11234456799999999999999999999999997
Q ss_pred CC
Q 002289 923 SD 924 (941)
Q Consensus 923 ~~ 924 (941)
..
T Consensus 380 ~~ 381 (392)
T PHA03207 380 KE 381 (392)
T ss_pred cc
Confidence 63
No 122
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.5e-37 Score=346.56 Aligned_cols=194 Identities=29% Similarity=0.415 Sum_probs=164.8
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHH-HHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|+.. +|+.||+|++.... ....+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999964 68999999986432 122345556655 56779999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~------ 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ------ 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC------
Confidence 9999988654 35889999999999999999999999 999999999999999999999999998743211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
........||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~ 199 (325)
T cd05604 150 -SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR 199 (325)
T ss_pred -CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999654
No 123
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-36 Score=327.96 Aligned_cols=256 Identities=29% Similarity=0.489 Sum_probs=210.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..++|++.+.||+|+||.||+|.+.+++.||+|.++.... ..+++.+|++++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 4567889999999999999999987788999999876432 356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.......+++..+..++.|++.|+.|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 99999999997655556899999999999999999999999 99999999999999999999999999986642211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
........+..|+|||++.+..++.++||||||+++|||++ |+.||......... . .+......
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~---------~~~~~~~~ 223 (261)
T cd05068 159 -----EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL-Q---------QVDQGYRM 223 (261)
T ss_pred -----cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-H---------HHHcCCCC
Confidence 11111223458999999999999999999999999999999 99998654321111 1 01111112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
..+..++..+.+++.+|++.+|.+||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 2345566889999999999999999999999999875
No 124
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=7e-37 Score=340.03 Aligned_cols=195 Identities=25% Similarity=0.391 Sum_probs=167.1
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||+||+|... +++.||||+++... ......+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 58899999987532 12234567888888887 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 150 (318)
T cd05570 81 GDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG----- 150 (318)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC-----
Confidence 99999886543 5889999999999999999999999 9999999999999999999999999986432111
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~ 200 (318)
T cd05570 151 --VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD 200 (318)
T ss_pred --CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence 11233468999999999999999999999999999999999999996543
No 125
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.3e-36 Score=328.49 Aligned_cols=256 Identities=31% Similarity=0.478 Sum_probs=210.4
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..+|++.+.||+|+||.||+|.+. +++.||+|.+.... ...+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 345778899999999999999975 58899999987543 3346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.......+++..++.++.|+++||+|||+++ ++||||||+||++++++.+||+|||++........
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~- 159 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY- 159 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee-
Confidence 99999999997766667899999999999999999999998 99999999999999999999999999976543211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+..... ......
T Consensus 160 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~---------~~~~~~ 224 (263)
T cd05052 160 -----TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELL---------EKGYRM 224 (263)
T ss_pred -----eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHH---------HCCCCC
Confidence 11112234568999999999999999999999999999998 8889865432 2211111 111122
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
..+..++..+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 34555678899999999999999999999999998865
No 126
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.9e-36 Score=329.83 Aligned_cols=254 Identities=24% Similarity=0.354 Sum_probs=198.2
Q ss_pred eeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
||+|+||.||++..+ +|+.||+|.+..... ..++.+..|++++++++||||+++++++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999965 689999999864322 2234566799999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--------
Confidence 99987666667899999999999999999999999 9999999999999999999999999987653211
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHH
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 852 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (941)
......|+..|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~-------------------------- 203 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK-------------------------- 203 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH--------------------------
Confidence 122345889999999999988999999999999999999999999643221100
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCC----ccCCCCCCCCCCCC
Q 002289 853 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS----SSMLKHPYVSSDVS 926 (941)
Q Consensus 853 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa----~e~L~Hpwf~~~~~ 926 (941)
. ++....+....... ....+.+..+++.+||..||++|+++ ++++.||||..-.+
T Consensus 204 ~---~~~~~~~~~~~~~~----------------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~ 262 (277)
T cd05607 204 E---ELKRRTLEDEVKFE----------------HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF 262 (277)
T ss_pred H---HHHHHhhccccccc----------------cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence 0 00001111110000 00112334578888999999999999 56779999987443
No 127
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=9.3e-37 Score=343.00 Aligned_cols=282 Identities=23% Similarity=0.358 Sum_probs=206.9
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccC-----
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----- 677 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 677 (941)
...++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34678999999999999999999964 688999999875322 2345678899999999999999999987533
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecc
Q 002289 678 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 678 -~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGl 756 (941)
...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence 4578999998 8899988753 34889999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhcc
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~ 835 (941)
++..... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.....
T Consensus 165 ~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~--- 230 (343)
T cd07878 165 ARQADDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIME--- 230 (343)
T ss_pred ceecCCC----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHH---
Confidence 9864321 223468899999999877 568899999999999999999999996543321 1111100
Q ss_pred chhhhcCCCCCCChHHHHHHHH-HHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcc
Q 002289 836 MFSVIDGNMGSYPSECVEKFIK-LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 914 (941)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~l~~-l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 914 (941)
. .+..+.+....+.. ........-|. .|. . .....+...++...+|+.+||..||++|+|++|
T Consensus 231 ---~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-------~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~e 294 (343)
T cd07878 231 ---V----VGTPSPEVLKKISSEHARKYIQSLPH-MPQ-Q-------DLKKIFRGANPLAIDLLEKMLVLDSDKRISASE 294 (343)
T ss_pred ---H----hCCCCHHHHHhcchhhHHHHhhcccc-ccc-h-------hHHHhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 0 01111111111100 00111111111 110 0 011122234455678999999999999999999
Q ss_pred CCCCCCCCCC
Q 002289 915 MLKHPYVSSD 924 (941)
Q Consensus 915 ~L~Hpwf~~~ 924 (941)
+|+||||...
T Consensus 295 ll~hp~~~~~ 304 (343)
T cd07878 295 ALAHPYFSQY 304 (343)
T ss_pred HhcCcchhcc
Confidence 9999999763
No 128
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.8e-37 Score=342.82 Aligned_cols=200 Identities=24% Similarity=0.376 Sum_probs=170.0
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcC-CCceeeeeeccccCCcEEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~ 684 (941)
+|+..+.||+|+||+||+|... +|+.||+|++..... ...+.+..|.++++.+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677899999999999999965 689999999875321 22345778888888885 577888999999989999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 9999999999986543 4889999999999999999999999 9999999999999999999999999987532211
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (323)
T cd05615 156 -------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 205 (323)
T ss_pred -------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC
Confidence 11233468999999999999999999999999999999999999997543
No 129
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1e-37 Score=346.84 Aligned_cols=238 Identities=24% Similarity=0.307 Sum_probs=186.7
Q ss_pred ceeeccCcEEEEEEEe----CCCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 615 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
+.||+|+||.||++.. .+|+.||+|+++.... .....+.+|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3589999999875322 223457789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+|+|.+++.+. ..+++..++.++.||++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---- 152 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---- 152 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC----
Confidence 99999999654 35899999999999999999999999 9999999999999999999999999987543221
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (941)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .... +. .....+|
T Consensus 153 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-~~~~---------i~-~~~~~~p 218 (318)
T cd05582 153 ---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-TMTM---------IL-KAKLGMP 218 (318)
T ss_pred ---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-HHHH---------HH-cCCCCCC
Confidence 12234568999999999999889999999999999999999999997543211 1110 01 1111233
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHH
Q 002289 849 SECVEKFIKLALKCCQDETDARPSMSE 875 (941)
Q Consensus 849 ~~~~~~l~~l~~~c~~~~p~~RPs~~~ 875 (941)
...+..+.+++..|++.+|++||++.+
T Consensus 219 ~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 334445555666666666666666554
No 130
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=7.3e-37 Score=346.63 Aligned_cols=208 Identities=22% Similarity=0.303 Sum_probs=176.6
Q ss_pred HHHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccC
Q 002289 602 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 677 (941)
Q Consensus 602 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 677 (941)
.++....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 345556789999999999999999999975 68899999986422 12234578899999999999999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
+..++||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 9999999999999999998643 3788888999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccC----CCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
+...... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 190 ~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 251 (371)
T cd05622 190 MKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (371)
T ss_pred eEcCcCC------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence 8653221 1112345699999999998754 37889999999999999999999997543
No 131
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.2e-36 Score=338.03 Aligned_cols=289 Identities=25% Similarity=0.344 Sum_probs=195.4
Q ss_pred cceeeccCcEEEEEEEeC---CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccc--cCCcEEEEEecCC
Q 002289 614 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQMLVYEFMS 688 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~LV~e~~~ 688 (941)
..+||+|+||+||+|+.. ++..||+|.+..... ...+.+|++++++++||||+++++++. .....++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999964 357899998875332 345788999999999999999999884 3557899999995
Q ss_pred CCCHHHHHhhc-------CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE----cCCCcEEEeeeccc
Q 002289 689 NGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLS 757 (941)
Q Consensus 689 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl----~~~~~~kl~DFGla 757 (941)
++|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5888877532 2235888999999999999999999999 9999999999999 56679999999999
Q ss_pred cccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
+....... .........||..|+|||++.+ ..++.++|||||||++|||+||+.||........... .+....+
T Consensus 160 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~-~~~~~~~ 234 (317)
T cd07867 160 RLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN-PFHHDQL 234 (317)
T ss_pred eccCCCcc----cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccc-cccHHHH
Confidence 86543221 1112234568899999999876 4588999999999999999999999964332110000 0000000
Q ss_pred hhhhcCCCCCCChHHHHHHHHH------HHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC
Q 002289 837 FSVIDGNMGSYPSECVEKFIKL------ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 910 (941)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~l~~l------~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 910 (941)
...+. ..+....+.+..+.+. .... .......++ +...+ .......+....+++.+||+.||++||
T Consensus 235 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~---~~~~~~~~~~~~~ll~~~l~~dP~~R~ 306 (317)
T cd07867 235 DRIFS-VMGFPADKDWEDIRKMPEYPTLQKDF-RRTTYANSS---LIKYM---EKHKVKPDSKVFLLLQKLLTMDPTKRI 306 (317)
T ss_pred HHHHH-hcCCCChhhhhhhhhcccchhhhhhh-cccccCCch---hhhhh---hcccCCCChHHHHHHHHHhccCccccc
Confidence 00000 0011111111111100 0000 000000011 11111 111122344567799999999999999
Q ss_pred CCccCCCCCCC
Q 002289 911 SSSSMLKHPYV 921 (941)
Q Consensus 911 sa~e~L~Hpwf 921 (941)
||+|+|+||||
T Consensus 307 t~~e~l~hp~f 317 (317)
T cd07867 307 TSEQALQDPYF 317 (317)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 132
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=9.5e-37 Score=333.62 Aligned_cols=200 Identities=28% Similarity=0.411 Sum_probs=174.0
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
|+..+.||+|+||+||+|.+. +++.||+|.+...... ....+.+|+++++.++|+||+++++++...+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999964 6899999998654322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 99999999987655557999999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
......|+..|+|||++.+..++.++|+||+||++|||++|+.||....
T Consensus 157 ------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~ 205 (285)
T cd05632 157 ------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK 205 (285)
T ss_pred ------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 1123468999999999999999999999999999999999999997543
No 133
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.4e-37 Score=350.00 Aligned_cols=208 Identities=25% Similarity=0.370 Sum_probs=174.9
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|+..+.||+|+||+||+|... +++.||+|+++... ......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999965 68999999987432 122356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 9999999999996543 4889999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCc----------------------------cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCC
Q 002289 765 IEGI----------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 816 (941)
Q Consensus 765 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~P 816 (941)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0000 000011234699999999999999999999999999999999999999
Q ss_pred CCCCc
Q 002289 817 ISHGK 821 (941)
Q Consensus 817 f~~~~ 821 (941)
|....
T Consensus 236 f~~~~ 240 (360)
T cd05627 236 FCSET 240 (360)
T ss_pred CCCCC
Confidence 96543
No 134
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7e-37 Score=341.96 Aligned_cols=202 Identities=28% Similarity=0.344 Sum_probs=172.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||+||+++.. +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999965 68999999986421 122356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.+. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999653 235889999999999999999999999 9999999999999999999999999987543221
Q ss_pred CCCccccccccccccCCCccccccccc-----CCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
........||+.|+|||++.. ..++.++||||+||++|||++|+.||...
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 157 ------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 111223458999999999873 45788999999999999999999999654
No 135
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.3e-36 Score=329.45 Aligned_cols=256 Identities=28% Similarity=0.503 Sum_probs=209.3
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC------CcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 680 (941)
.++|.+.+.||+|+||.||+|...+ ++.||||.++..... ..+.+.+|+++++.++|+||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 4568888999999999999998632 478999998765444 456899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc
Q 002289 681 MLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 748 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~ 748 (941)
++||||+++++|.++++..+ ...+++..+..++.|++.|++|||+++ ++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence 99999999999999997542 235788999999999999999999999 999999999999999999
Q ss_pred EEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002289 749 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827 (941)
Q Consensus 749 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~ 827 (941)
+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 161 ~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-~~ 234 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-VI 234 (280)
T ss_pred EEECCcccceecccCcc-----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HH
Confidence 99999999875432211 011122345678999999999999999999999999999998 999987544321 11
Q ss_pred HHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
. .+..+.....+..++..+.+++.+||..+|++||++.++++.|+
T Consensus 235 ~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 E---------CITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred H---------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1 11122233345566788999999999999999999999998875
No 136
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.6e-37 Score=336.74 Aligned_cols=283 Identities=23% Similarity=0.375 Sum_probs=207.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|.+.+.||+|+||.||+|..+ +++.||+|.+..... .....+.+|++++++++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57888999999999999999975 688999999874332 2234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 96 69999886543 35788999999999999999999999 9999999999999999999999999987543221
Q ss_pred CccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... +...... .. .+
T Consensus 159 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-~~~~~~~------~~----~~ 222 (301)
T cd07873 159 -----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-EQLHFIF------RI----LG 222 (301)
T ss_pred -----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH------HH----cC
Confidence 11123346889999999876 45788999999999999999999999754332 1111110 00 01
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
......+..+......+....|..++.. + ....+..++...++|.+||+.||++|+|++|+|+||||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 223 TPTEETWPGILSNEEFKSYNYPKYRADC------L---HNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred CCChhhchhhhccccccccccCcccccc------H---HhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 1111111111110000000011111100 0 0112233455678999999999999999999999999965
No 137
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.6e-36 Score=343.96 Aligned_cols=264 Identities=25% Similarity=0.378 Sum_probs=210.0
Q ss_pred HHHHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcC-CCceeeeeeccc
Q 002289 604 MALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLH-HRNLVSLVGYCD 675 (941)
Q Consensus 604 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~nIv~l~~~~~ 675 (941)
+....++|.+.++||+|+||.||+|++. .+..||||+++..... ..+.+.+|+++++++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 3445678899999999999999999852 1347999999754332 3457899999999996 999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC-------------------------------------------------------
Q 002289 676 EEGEQMLVYEFMSNGTLRDQLSAKS------------------------------------------------------- 700 (941)
Q Consensus 676 ~~~~~~LV~e~~~~gsL~~~l~~~~------------------------------------------------------- 700 (941)
..+..++||||+++|+|.++++...
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 9999999999999999999886421
Q ss_pred ---------------------------------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcE
Q 002289 701 ---------------------------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 741 (941)
Q Consensus 701 ---------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NI 741 (941)
...+++..+..++.|+++||+|||+.+ |+||||||+||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Ni 268 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNV 268 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhE
Confidence 124778888999999999999999998 99999999999
Q ss_pred EEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCC
Q 002289 742 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 820 (941)
Q Consensus 742 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~ 820 (941)
|++.++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSN-----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred EEeCCCEEEEEeCCcceecccccc-----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 999999999999999986532211 111122346778999999999999999999999999999997 98998653
Q ss_pred chhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 821 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
........ .+..+.....+..++..+.+++.+||+.+|++||++.++.+.|+++.
T Consensus 344 ~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 344 IVDSTFYN---------KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred chhHHHHH---------HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 22111111 11111222345566788999999999999999999999999998754
No 138
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-36 Score=352.95 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=207.3
Q ss_pred CCCccceeeccCcEEEEEEEeC-C-CcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-D-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+++++.++||||+++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999854 3 6788999876555444567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 688 SNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 688 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
++|+|.++++.. ...++++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988642 3446889999999999999999999998 99999999999999999999999999986543211
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +. +..+..+...
T Consensus 225 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-~~---------~~~~~~~~~~ 289 (478)
T PTZ00267 225 -----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-EI---------MQQVLYGKYD 289 (478)
T ss_pred -----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HH---------HHHHHhCCCC
Confidence 11233456899999999999999999999999999999999999999754321 11 1122223333
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
..+..++..+.+++..|+..+|+.||++.+++.
T Consensus 290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 445556678999999999999999999998864
No 139
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.9e-36 Score=325.49 Aligned_cols=256 Identities=31% Similarity=0.478 Sum_probs=208.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.++|++.++||+|+||+||+|.+.+...||+|+++.... ..+.+.+|++++++++|+||+++++++.. +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 467999999999999999999987777899999875332 34578999999999999999999998754 5679999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++|+|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||++++++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-- 157 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 157 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc--
Confidence 9999999997654456889999999999999999999998 99999999999999999999999999976543221
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......++..|+|||+..+..++.++|||||||++|||++ |+.||........ .. .+.......
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-~~---------~~~~~~~~~ 223 (262)
T cd05071 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-LD---------QVERGYRMP 223 (262)
T ss_pred ----ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-HH---------HHhcCCCCC
Confidence 11122346678999999998899999999999999999999 8888865432111 11 111111122
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
.+.+++..+.+++.+|++.+|++||++.++.+.|+...
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 34566788999999999999999999999999998753
No 140
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.2e-36 Score=324.72 Aligned_cols=255 Identities=29% Similarity=0.481 Sum_probs=208.6
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..++|++.++||+|+||.||+|..+++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. .+..++||||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 3467889999999999999999988888899999876433 3457899999999999999999999885 4568999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.++++......+++..++.++.|++.||+|||+.+ |+||||||+||++++++.++|+|||.+........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05070 82 MSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY- 157 (260)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc-
Confidence 99999999997655556899999999999999999999999 99999999999999999999999999976533211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||...... +... .+......
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~---------~~~~~~~~ 222 (260)
T cd05070 158 -----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLE---------QVERGYRM 222 (260)
T ss_pred -----ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHH---------HHHcCCCC
Confidence 11112235668999999988899999999999999999999 88888654321 1111 11112222
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
..+...+..+.+++.+|+..+|++||++.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 3455667789999999999999999999999988864
No 141
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=327.05 Aligned_cols=277 Identities=22% Similarity=0.318 Sum_probs=219.8
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
..+.|+.-++||+|+||.||-++.+ +|+.+|.|.+..... .++...+.|-.++.+++.+.||.+--.|...+..|+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3466788899999999999999865 699999998765433 345667899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
|+..|.||+|.-+|...+...++++.++.++.+|+.||++||++. ||.||+||+|||+|+.|+++|+|+|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999998887778999999999999999999999999 99999999999999999999999999997754
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
.. .....+||.+|||||++.++.|+...|.||+||++|||+.|+.||.....-+++-. +...+..
T Consensus 340 g~--------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE-------vdrr~~~ 404 (591)
T KOG0986|consen 340 GK--------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE-------VDRRTLE 404 (591)
T ss_pred CC--------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH-------HHHHHhc
Confidence 32 23445799999999999999999999999999999999999999964333222110 0000101
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC-----CCccCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLK 917 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~ 917 (941)
....+++.+ ++++.++.+.+|+.||++|+ .|+++-+
T Consensus 405 ~~~ey~~kF---------------------------------------S~eakslc~~LL~Kdp~~RLGcrg~ga~evk~ 445 (591)
T KOG0986|consen 405 DPEEYSDKF---------------------------------------SEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKE 445 (591)
T ss_pred chhhccccc---------------------------------------CHHHHHHHHHHHccCHHHhccCCCcCcchhhh
Confidence 111122222 23344566666777777775 6789999
Q ss_pred CCCCCCCCCCCccccccccccCC
Q 002289 918 HPYVSSDVSGSNLVSGVIPTITP 940 (941)
Q Consensus 918 Hpwf~~~~~~~~~~~~~~~~~~~ 940 (941)
||||..--+..--.++..||+-|
T Consensus 446 HpfFk~lnw~rleagml~PPfiP 468 (591)
T KOG0986|consen 446 HPFFKDLNWRRLEAGMLEPPFIP 468 (591)
T ss_pred CcccccCCHhHHhccCCCCCCCC
Confidence 99999977765555556666554
No 142
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.6e-36 Score=329.27 Aligned_cols=260 Identities=29% Similarity=0.512 Sum_probs=212.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
.+|.+.+.||+|+||.||+|... ++..+++|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45777889999999999999842 356799999887666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc
Q 002289 683 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 748 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~ 748 (941)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999996532 234789999999999999999999999 999999999999999999
Q ss_pred EEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002289 749 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827 (941)
Q Consensus 749 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~ 827 (941)
++|+|||+++....... ........++..|+|||++.+..++.++|||||||++|||+| |+.||....... ..
T Consensus 162 ~~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~ 235 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VI 235 (291)
T ss_pred EEECCCCcccccCCCce-----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence 99999999975433211 111223446788999999999999999999999999999999 999986544321 11
Q ss_pred HHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
. ....+.....+..++..+.+++.+||+.+|.+||++.++++.|+++.+.
T Consensus 236 ~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 236 E---------CITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred H---------HHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1 1111222223444567889999999999999999999999999998664
No 143
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3e-36 Score=324.26 Aligned_cols=251 Identities=30% Similarity=0.476 Sum_probs=205.5
Q ss_pred cCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
++|++.+.||+|+||+||+|.+.++..||+|.+..... ..+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 45778899999999999999987777899998875433 34678999999999999999999999998889999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+|+|.+++..... .+++..++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05113 83 NGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--- 155 (256)
T ss_pred CCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCce---
Confidence 9999999975433 5899999999999999999999999 99999999999999999999999999876532211
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||........ .. .+..+.....
T Consensus 156 ---~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~-~~---------~~~~~~~~~~ 222 (256)
T cd05113 156 ---TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSET-VE---------KVSQGLRLYR 222 (256)
T ss_pred ---eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH-HH---------HHhcCCCCCC
Confidence 11122335678999999998889999999999999999999 9999865443111 11 1112222223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
+...+..+.+++.+||+.+|.+||++.++++.+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 344567889999999999999999999998765
No 144
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.8e-36 Score=331.07 Aligned_cols=280 Identities=24% Similarity=0.394 Sum_probs=207.8
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|+||.||+|+.. +|+.||+|+++..... ....+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 5788899999999999999975 6899999998653222 235678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
++ ++|.+++.... ..+++..++.++.||++||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 96 68888876533 35899999999999999999999999 9999999999999999999999999987553221
Q ss_pred CccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||++.+. .++.++|||||||++|||+||..|+....+..+........ .+
T Consensus 154 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----------~~ 218 (284)
T cd07839 154 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL----------LG 218 (284)
T ss_pred -----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHH----------hC
Confidence 112234578899999998774 47899999999999999999999986655443332221110 11
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
..+......+.++... ...+...... .+....+.....+.+++.+||..||++|||++|++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 219 TPTEESWPGVSKLPDY------KPYPMYPATT----SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCChHHhHHhhhcccc------cccCCCCCcc----hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 1111111111111100 0111111000 1112223445566789999999999999999999999998
No 145
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.2e-36 Score=333.23 Aligned_cols=284 Identities=22% Similarity=0.348 Sum_probs=208.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|++.+.||+|+||.||++... ++..+|+|.++.... ....++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46889999999999999999965 688899998875422 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
+++++|.++++.. ..+++..+..++.|+++||+|||+ .+ ++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 9999999999755 358889999999999999999997 46 999999999999999999999999998754221
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .. ....+... .........
T Consensus 154 -------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-~~-~~~~~~~~-~~~~~~~~~- 222 (308)
T cd06615 154 -------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-KE-LEAMFGRP-VSEGEAKES- 222 (308)
T ss_pred -------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-hh-HHHhhcCc-cccccccCC-
Confidence 11234678899999999888899999999999999999999999964432 11 11111100 000000000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC------CCCCCCcccccccCCCCCCCCCCCccCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP------ESDTKTPEFINSEHTSKEETPPSSSSMLKHP 919 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~------~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 919 (941)
. ......+...+....+.+.++.+....+ ..+....+|+.+||..||++|||++|+++||
T Consensus 223 --~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 223 --H------------RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred --c------------ccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0 0000001111111111111111111100 0123356899999999999999999999999
Q ss_pred CCCCC
Q 002289 920 YVSSD 924 (941)
Q Consensus 920 wf~~~ 924 (941)
||...
T Consensus 289 ~~~~~ 293 (308)
T cd06615 289 FIKRA 293 (308)
T ss_pred hhhhc
Confidence 99763
No 146
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.8e-36 Score=328.48 Aligned_cols=258 Identities=28% Similarity=0.475 Sum_probs=207.1
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCC
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 678 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 678 (941)
...++|++.+.||+|+||.||+|.+. .+..||+|+++... .....++.+|+.+++.++|+||+++++++...+
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35678999999999999999999753 25679999886533 233457889999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcC--------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEE
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 750 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~k 750 (941)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEE
Confidence 9999999999999999986532 124678889999999999999999998 99999999999999999999
Q ss_pred EeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002289 751 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 829 (941)
Q Consensus 751 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~ 829 (941)
|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 160 l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~~~~- 232 (277)
T cd05062 160 IGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQVLR- 232 (277)
T ss_pred ECCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHH-
Confidence 9999998755332210 11112345678999999999899999999999999999999 6888864432 11111
Q ss_pred HHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 830 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
.+........+..++..+.+++.+|++.+|++||++.++++.++
T Consensus 233 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 233 --------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred --------HHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11222233345556678999999999999999999999998875
No 147
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.3e-36 Score=328.27 Aligned_cols=261 Identities=30% Similarity=0.494 Sum_probs=211.3
Q ss_pred hcCCCccceeeccCcEEEEEEEe------CCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
.++|.+.+.||+|+||.||++.. .++..+|+|.+........+.+.+|++++++++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 45788899999999999999984 234679999987655555678999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcC-----------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEE
Q 002289 682 LVYEFMSNGTLRDQLSAKS-----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 750 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~k 750 (941)
+||||+++++|.+++.... ...+++..++.++.|++.||+|||+++ ++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 9999999999999996432 235899999999999999999999999 99999999999999999999
Q ss_pred EeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002289 751 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 829 (941)
Q Consensus 751 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~ 829 (941)
|+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +...
T Consensus 161 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~- 233 (288)
T cd05093 161 IGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIE- 233 (288)
T ss_pred eccCCccccccCCce-----eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH-
Confidence 999999975532211 111122335678999999999999999999999999999998 88898654321 1111
Q ss_pred HHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 830 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
.+..+.....+..++..+.+++.+||+.+|.+||++.++.+.|+++...
T Consensus 234 --------~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 234 --------CITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --------HHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1111122223334556799999999999999999999999999988654
No 148
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=331.49 Aligned_cols=260 Identities=29% Similarity=0.479 Sum_probs=222.3
Q ss_pred HHHhcCCCccceeeccCcEEEEEEEeCC---C--cEEEEEEeccC-CchhhHhHHHHHHHHHhcCCCceeeeeeccccCC
Q 002289 605 ALATNNFNSSTQIGQGGYGKVYKGILPD---G--TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 678 (941)
Q Consensus 605 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 678 (941)
....+.....++||.|-||.||+|.+.+ | -.||||..+.+ .....+.|+.|..+|+.++||||++++|.|.+ .
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q 463 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence 3444555567899999999999999632 3 35899999874 34456789999999999999999999999976 4
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
..|+|||.++-|.|..+++.+ +..++......++.||+.||+|||+.. +|||||..+|||+.+...+|++|||+++
T Consensus 464 P~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred ceeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhh
Confidence 789999999999999999765 456888999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccch
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
..+...++.. ....-.+-|||||.+.-.+++.++|||-|||++||++. |..||..-.+ .+.+.
T Consensus 540 ~~ed~~yYka------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN----------sDVI~ 603 (974)
T KOG4257|consen 540 YLEDDAYYKA------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN----------SDVIG 603 (974)
T ss_pred hccccchhhc------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc----------cceEE
Confidence 8876654322 12233568999999999999999999999999999998 9999986554 23444
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
.+-.+.+.+.|+.|+..++.++.+||..+|.+||.+.++...|.++..
T Consensus 604 ~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 556678888999999999999999999999999999999999988765
No 149
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.5e-36 Score=338.84 Aligned_cols=206 Identities=21% Similarity=0.236 Sum_probs=168.1
Q ss_pred ccceeecc--CcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 613 SSTQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 613 ~~~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
+.++||+| +|++||++..+ +|+.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 78899999864 789999999875432 22356778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++|+|.+++.......+++..++.++.|++.||+|||+++ |+||||||+||+++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999997655556899999999999999999999999 9999999999999999999999998754332111000
Q ss_pred ccccccccccccCCCccccccccc--CCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
...........++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 214 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 214 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 000011122346778999999976 468899999999999999999999997543
No 150
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=7.8e-36 Score=322.84 Aligned_cols=257 Identities=29% Similarity=0.464 Sum_probs=209.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC----CcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
.++|++.+.||+|+||+||+|.+.. ...||||.++..... ....+.+|+.++++++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 4678899999999999999999742 457999998754333 34578999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||++++++.++|+|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999997643 36899999999999999999999998 99999999999999999999999999987642
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
... ........++..|+|||.+.+..++.++||||||+++|||++ |..||........ .. .+..
T Consensus 159 ~~~-----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~--~~--------~~~~ 223 (266)
T cd05033 159 SEA-----TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV--IK--------AVED 223 (266)
T ss_pred ccc-----ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH--HH--------HHHc
Confidence 111 111112335678999999999999999999999999999998 9999965433211 11 1111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
......+..++..+.+++..|++.+|++||++.++++.|+++
T Consensus 224 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 224 GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 222233455677899999999999999999999999998864
No 151
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1e-36 Score=339.95 Aligned_cols=239 Identities=23% Similarity=0.308 Sum_probs=183.2
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHH-HHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||+||+|+.. +++.||+|++..... .....+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999975 578999999874321 12234444544 56788999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+.+..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~------ 149 (325)
T cd05602 81 GELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH------ 149 (325)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccC------
Confidence 99999996543 4778888899999999999999999 999999999999999999999999998753221
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..... .. .....+.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i---------~~-~~~~~~~ 217 (325)
T cd05602 150 -NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNI---------LN-KPLQLKP 217 (325)
T ss_pred -CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-HHHHH---------Hh-CCcCCCC
Confidence 112234568999999999999999999999999999999999999997544321 11110 00 1111222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHH
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMSEV 876 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~~v 876 (941)
..+..+.+++.+|++.+|.+|++..+.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence 344555666666666666666666543
No 152
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.1e-36 Score=323.14 Aligned_cols=255 Identities=27% Similarity=0.459 Sum_probs=209.3
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..++|++.++||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++|+||+++++++. .+..++||||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 4567889999999999999999988899999999876443 3457899999999999999999999874 4578999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.......+++..++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 99999999997666667899999999999999999999998 99999999999999999999999999976542211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||...... +.... +......
T Consensus 158 -----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~---------~~~~~~~ 222 (260)
T cd05067 158 -----TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-EVIQN---------LERGYRM 222 (260)
T ss_pred -----ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-HHHHH---------HHcCCCC
Confidence 11123345678999999998889999999999999999999 99999654321 11111 1111112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
..+...+.++.+++.+|+..+|++||+++++...|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2344456789999999999999999999999988874
No 153
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.8e-36 Score=336.57 Aligned_cols=263 Identities=27% Similarity=0.454 Sum_probs=207.5
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCch-hhHhHHHHHHHHHhc-CCCceeeeeecccc-
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 676 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~- 676 (941)
...++|++.+.||+|+||.||+|... +++.||+|+++..... ..+.+.+|+++++++ +|+||++++++|..
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 34568999999999999999999742 3578999998754322 345678899999999 89999999998854
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 002289 677 EGEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 700 (941)
Q Consensus 677 ~~~~~LV~e~~~~gsL~~~l~~~~-------------------------------------------------------- 700 (941)
....++||||+++++|.+++....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 457889999999999999986422
Q ss_pred ---CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcccccccccc
Q 002289 701 ---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 777 (941)
Q Consensus 701 ---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~ 777 (941)
..++++..+.+++.||+.||+|||+++ |+||||||+||++++++.+||+|||+++.+..... .......
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-----~~~~~~~ 235 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGDA 235 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----hhhccCC
Confidence 126889999999999999999999998 99999999999999999999999999986532211 1112233
Q ss_pred ccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHH
Q 002289 778 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFI 856 (941)
Q Consensus 778 ~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 856 (941)
.++..|+|||++.+..++.++|||||||++|||++ |+.||........ ..... ..+.....+.....++.
T Consensus 236 ~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~ 306 (337)
T cd05054 236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRRL--------KEGTRMRAPEYATPEIY 306 (337)
T ss_pred CCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHHH--------hccCCCCCCccCCHHHH
Confidence 45678999999999999999999999999999998 9999964322111 11111 11112223445567889
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 857 KLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 857 ~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
+++.+||+.+|++||++.+++++|+++..
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999997653
No 154
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.9e-36 Score=326.43 Aligned_cols=256 Identities=28% Similarity=0.491 Sum_probs=205.8
Q ss_pred cCCCccceeeccCcEEEEEEEe-----CCCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
++|++.+.||+|+||+||+|.. .++..||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577889999999999999984 2467899999875332 334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC---------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC
Q 002289 683 VYEFMSNGTLRDQLSAKS---------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 747 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~ 747 (941)
||||+++++|.+++.... ...+++...+.++.|++.||+|||+++ |+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 999999999999985332 234788899999999999999999999 99999999999999999
Q ss_pred cEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHH
Q 002289 748 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826 (941)
Q Consensus 748 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~ 826 (941)
.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05090 162 HVKISDLGLSREIYSADY-----YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEV 235 (283)
T ss_pred cEEeccccccccccCCcc-----eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999976533221 111223345678999999998889999999999999999998 9889865332 111
Q ss_pred HHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 827 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
... +........+..++..+.+++.+|++.+|++||++.++.+.+..
T Consensus 236 ~~~---------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 IEM---------VRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHH---------HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111 11112223445566789999999999999999999999988865
No 155
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.9e-36 Score=328.31 Aligned_cols=282 Identities=23% Similarity=0.351 Sum_probs=206.5
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|++.+.||+|++|.||+|..+ +++.||+|.+...... ....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67889999999999999999975 6899999998653322 234577899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
++ ++|.+++..... .+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 85 ~~-~~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 85 LD-TDLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred CC-CCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 97 599998865443 6889999999999999999999999 9999999999999999999999999987542211
Q ss_pred CccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.......+.....+. .+.
T Consensus 158 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~----------~~~ 222 (291)
T cd07844 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFR----------VLG 222 (291)
T ss_pred -----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH----------hcC
Confidence 11122346788999999876 45889999999999999999999999755433222221111 011
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCC--CCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD--TKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~--~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
....+................+...+ ..+ ....+... ....+++.+||..+|++|||++|++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 223 TPTEETWPGVSSNPEFKPYSFPFYPP--RPL-------INHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CCChhhhhhhhhccccccccccccCC--hhH-------HHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 11111111111110000000011111 111 11112222 455689999999999999999999999998
No 156
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=7.7e-36 Score=326.11 Aligned_cols=279 Identities=27% Similarity=0.399 Sum_probs=207.8
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|+..+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788999999999999999975 6899999988753322 235788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
++ ++|.+++.......+++..++.++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 95 68999987665667899999999999999999999998 9999999999999999999999999987553221
Q ss_pred CccccccccccccCCCcccccccccCC-CCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||++.+.. ++.++||||||+++|||+||+.||..........+ .... .+
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~-~~~~----------~~ 218 (284)
T cd07860 155 -----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRT----------LG 218 (284)
T ss_pred -----cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHH----------hC
Confidence 1112234678999999987644 68899999999999999999999975543222111 1100 01
Q ss_pred CCChHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~-RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
..+......+..+...+. ..|.. +....++ .+..++...++|.+|+..||++|||++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 219 TPDEVVWPGVTSLPDYKP-SFPKWARQDFSKV----------VPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCChhhhhhhhHHHHHHh-hcccccccCHHHH----------cccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 111111112222111111 11111 1111111 12233445689999999999999999999999998
No 157
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=9.2e-36 Score=326.38 Aligned_cols=260 Identities=27% Similarity=0.444 Sum_probs=207.6
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCC
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 678 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 678 (941)
...++|++.++||+|+||.||+|..+ .+..||+|.+..... .....+.+|+.+++.++|+||+++++++.+.+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45788999999999999999999753 245899998865432 23456788999999999999999999999989
Q ss_pred cEEEEEecCCCCCHHHHHhhcC--------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEE
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 750 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~k 750 (941)
..++||||+++|+|.+++.... ....++..+..++.|++.||.|||+++ |+||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence 9999999999999999997532 234567788899999999999999999 99999999999999999999
Q ss_pred EeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002289 751 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 829 (941)
Q Consensus 751 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~ 829 (941)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 160 L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~~~~- 232 (288)
T cd05061 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLK- 232 (288)
T ss_pred ECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH-
Confidence 999999876533221 111122235678999999999899999999999999999999 7888864332 11111
Q ss_pred HHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 830 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
.+.++.....+..++..+.+++..|++.+|++||++.++++.+++.
T Consensus 233 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 --------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred --------HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1222333334555667899999999999999999999999888764
No 158
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4e-36 Score=328.60 Aligned_cols=282 Identities=24% Similarity=0.380 Sum_probs=209.6
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+.++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 5788999999999999999975 689999999876442 2346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+ +++|.+++.... ..+++..++.++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 999999986544 56899999999999999999999999 99999999999999999999999999886543221
Q ss_pred CccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|+|||.+.+. .++.++||||+||+++||++|+.||....+... ...... ...
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~----------~~~ 218 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ-LAIVFR----------TLG 218 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH-HHHHHH----------HcC
Confidence 112234588899999998754 468899999999999999999777754433221 111100 001
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
......+..+.++....-...+..++.. +....+..+....+++.+||..||++|||++++|.||||.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKITFPESKPIP---------LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCChHHHhhccCcchhhcccCCCCCcch---------HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 1111111111111000000011111111 1122344456667899999999999999999999999995
No 159
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.1e-36 Score=326.50 Aligned_cols=279 Identities=27% Similarity=0.404 Sum_probs=205.0
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|++|.||+|+.. +++.||+|+++..... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999975 6899999998653222 235688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
++ ++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 96 68998886543 256899999999999999999999999 9999999999999999999999999987543221
Q ss_pred CCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......++..|+|||++.+ ..++.++|||||||++|||+||+.||............ .. ..
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~-~~------~~---- 218 (285)
T cd07861 156 ------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRI-FR------IL---- 218 (285)
T ss_pred ------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HH------Hh----
Confidence 11223356789999998875 45788999999999999999999999765433221111 00 00
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC-CCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETD-ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~-~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
+......+.....+... -...+. ..+. +.......+++..++|++||..||++|||+.|++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 219 GTPTEDVWPGVTSLPDY-KNTFPKWKKGS----------LRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CCCChhhhhcchhhHHH-HhhccccCcch----------hHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 01111111111100000 000000 0000 011122344556789999999999999999999999998
No 160
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=307.45 Aligned_cols=282 Identities=20% Similarity=0.320 Sum_probs=215.6
Q ss_pred chHHHHHHhcCCCccceeeccCcEEEEEEE-eCCCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccC
Q 002289 600 TYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 677 (941)
Q Consensus 600 ~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 677 (941)
+++|+...+ .+.||+|+|++|-.++ +.+|..+|||++.+.....++++.+|++++.+. .|+||+.++++|+++
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 467777777 4689999999999988 678999999999887667788999999999998 599999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC---cEEEeee
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADF 754 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~---~~kl~DF 754 (941)
+.+|||||.|.||+|..+++++. .+++.++.+++++|+.||.|||.+| |.||||||+|||..+.. -+||+||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecc
Confidence 99999999999999999997654 5899999999999999999999999 99999999999997654 4899999
Q ss_pred ccccccCCCCCCCccccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhCCCCCCCCch-hHHHHH
Q 002289 755 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKN-IVREVN 828 (941)
Q Consensus 755 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~-~~~~~~ 828 (941)
.++.-......-...........+|+..|||||+.. ...|+.+.|.||+||++|-|+.|..||...-. .-.|.+
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 887654322221122233345667999999999874 24588899999999999999999999964211 000000
Q ss_pred H---HHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCC
Q 002289 829 I---AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSK 905 (941)
Q Consensus 829 ~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~d 905 (941)
. ..-...+++.|......+|+..+..+ ..+++|++..+|..|
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahI-----------------------------------S~eakdlisnLlvrd 348 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKYEFPDKDWAHI-----------------------------------SSEAKDLISNLLVRD 348 (463)
T ss_pred CCccHHHHHHHHHHHhccCCcCChhhhHHh-----------------------------------hHHHHHHHHHHHhcc
Confidence 0 00001122223333333444333322 123457888899999
Q ss_pred CCCCCCCccCCCCCCCCCCCC
Q 002289 906 EETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 906 P~~R~sa~e~L~Hpwf~~~~~ 926 (941)
+..|.+|.+.++|||+..-.-
T Consensus 349 a~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 349 AKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred HHhhhhhhhccCCccccccch
Confidence 999999999999999976443
No 161
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8.1e-36 Score=320.84 Aligned_cols=251 Identities=27% Similarity=0.453 Sum_probs=204.2
Q ss_pred cCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
.+|++.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++|+||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35778899999999999999987778899999865332 34568899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--- 155 (256)
T cd05059 83 NGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--- 155 (256)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccc---
Confidence 9999999975433 5899999999999999999999999 99999999999999999999999999876532110
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||......... .. +........
T Consensus 156 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~---------~~~~~~~~~ 222 (256)
T cd05059 156 ---TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-ES---------VSAGYRLYR 222 (256)
T ss_pred ---cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-HH---------HHcCCcCCC
Confidence 11111223457999999999999999999999999999999 88898654332111 11 111111223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
+..++..+.+++.+||..+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 445677899999999999999999999998875
No 162
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=8.8e-36 Score=331.07 Aligned_cols=258 Identities=26% Similarity=0.442 Sum_probs=205.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCc----EEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
..+|++.+.||+|+||.||+|++. ++. .||+|+++... ....+++.+|+.+++.++||||++++|+|... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 356889999999999999999864 333 48999987543 23456789999999999999999999999764 577
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+|+||+++|+|.+++.... ..+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999997643 34788999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +. .....
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~-~~~~~-------- 225 (316)
T cd05108 161 ADEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EI-SSILE-------- 225 (316)
T ss_pred CCCc-----ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HH-HHHHh--------
Confidence 3221 011112234678999999999999999999999999999998 99998654321 11 11111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
.+.....+..+...+.+++..||..+|.+||++.+++..+..+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 226 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 111223344566788999999999999999999999999887754
No 163
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.7e-36 Score=339.05 Aligned_cols=203 Identities=28% Similarity=0.329 Sum_probs=171.8
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.++||+|+||+||+++.+ +++.||+|++..... .....+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999975 578999999864221 12345788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.+.. ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999997532 35888999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCccccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
........||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~ 212 (332)
T cd05623 157 ------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES 212 (332)
T ss_pred ------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC
Confidence 11123356899999999986 3467889999999999999999999997543
No 164
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-35 Score=319.39 Aligned_cols=254 Identities=30% Similarity=0.464 Sum_probs=206.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.++|.+.+.||+|+||.||+|.++++..||+|.+..... ..+.+.+|++++++++|+|++++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 356888999999999999999987777899998765332 3457889999999999999999999875 45688999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++|+|.++++......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05069 83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc--
Confidence 9999999997665556899999999999999999999998 99999999999999999999999999976532211
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......++..|+|||+..+..++.++||||||+++|||++ |+.||......... . .........
T Consensus 158 ----~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~---------~~~~~~~~~ 223 (260)
T cd05069 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL-E---------QVERGYRMP 223 (260)
T ss_pred ----cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-H---------HHHcCCCCC
Confidence 11112335678999999998899999999999999999999 89998754432111 1 011111223
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
.+...+..+.+++.+|+..+|++||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 345567889999999999999999999999998875
No 165
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9.8e-36 Score=320.97 Aligned_cols=257 Identities=30% Similarity=0.500 Sum_probs=211.6
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
...++|++.++||+|+||.||+|..++++.||||.+..... ..+++.+|++++++++|+||+++++++......++|||
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 35678999999999999999999988888999999875433 34678999999999999999999999998889999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|.+++.......+++..+..++.|++.|++|||+++ ++|+||||+||++++++.+||+|||.++.......
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 999999999997765567899999999999999999999998 99999999999999999999999999876542110
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......++..|+|||.+.+..++.++||||+|+++||+++ |+.||...... ..... +.....
T Consensus 159 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~---------~~~~~~ 222 (261)
T cd05034 159 ------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVLEQ---------VERGYR 222 (261)
T ss_pred ------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH---------HHcCCC
Confidence 11112234568999999999899999999999999999999 99999654321 11111 111111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
...+...+..+.+++.+|+..+|++||++.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 22344456789999999999999999999999988874
No 166
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.3e-36 Score=335.24 Aligned_cols=237 Identities=25% Similarity=0.345 Sum_probs=185.8
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHH-HHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|+.. +++.||+|++..... .....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 689999999875322 12334555554 67889999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----- 150 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE----- 150 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-----
Confidence 9999988654 34788888999999999999999999 9999999999999999999999999987432211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...... +.......+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~----------i~~~~~~~~~ 217 (321)
T cd05603 151 --ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-SQMYDN----------ILHKPLQLPG 217 (321)
T ss_pred --CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-HHHHHH----------HhcCCCCCCC
Confidence 122345689999999999999999999999999999999999999975432 111111 1111223344
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMS 874 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~ 874 (941)
.....+.+++..|++.+|.+||+..
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 4556677777778877777777653
No 167
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-35 Score=348.17 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=207.8
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCC-----
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 678 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 678 (941)
..++|++.+.||+|+||+||+|... +|+.||||++..... .....+.+|+.++..++|+||+++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4579999999999999999999854 789999999865432 23456889999999999999999988764332
Q ss_pred ---cEEEEEecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEee
Q 002289 679 ---EQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 753 (941)
Q Consensus 679 ---~~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~D 753 (941)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEEe
Confidence 368999999999999998653 2346899999999999999999999998 99999999999999999999999
Q ss_pred eccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhh
Q 002289 754 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833 (941)
Q Consensus 754 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~ 833 (941)
||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+...
T Consensus 187 FGls~~~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-~~~~~----- 255 (496)
T PTZ00283 187 FGFSKMYAATVS-----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-EEVMH----- 255 (496)
T ss_pred cccCeecccccc-----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHH-----
Confidence 999986543211 1122345689999999999999999999999999999999999999975432 11111
Q ss_pred ccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
....+.....+..++..+.+++..||+.+|.+||++.+++++
T Consensus 256 ----~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 256 ----KTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----HHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 122233334556677889999999999999999999998764
No 168
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.4e-36 Score=326.66 Aligned_cols=256 Identities=26% Similarity=0.421 Sum_probs=207.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCchh-hHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
.+|++.+.||+|+||.||+|... +++.||+|+++...... .+.+.+|+.+++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 34667889999999999999853 25789999997543322 356889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhc--------------CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC
Q 002289 682 LVYEFMSNGTLRDQLSAK--------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 747 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~ 747 (941)
+++||+++++|.+++... ....+++..++.++.|++.||+|||+++ |+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCC
Confidence 999999999999998532 1234788889999999999999999999 99999999999999999
Q ss_pred cEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHH
Q 002289 748 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 826 (941)
Q Consensus 748 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~ 826 (941)
.+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||..... .+.
T Consensus 162 ~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05091 162 NVKISDLGLFREVYAADY-----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDV 235 (283)
T ss_pred ceEecccccccccccchh-----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999876532211 111223345778999999998889999999999999999998 8888865432 111
Q ss_pred HHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 827 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
. ..+........+.+++..+.+++..||+.+|++||++.++++.|+.
T Consensus 236 ~---------~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 I---------EMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H---------HHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 1222333344566788889999999999999999999999998864
No 169
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-35 Score=317.18 Aligned_cols=249 Identities=26% Similarity=0.440 Sum_probs=199.3
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC--CchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|+||.||+|... +++.|++|.+... .....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777899999999999999975 6899999988643 233456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.++++......+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 99999999998765567899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......|+..|+|||+..+..++.++|||||||++|||++|+.||...... .... .+..+....
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~~~ 220 (256)
T cd08529 156 -----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-ALIL---------KIIRGVFPP 220 (256)
T ss_pred -----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-HHHH---------HHHcCCCCC
Confidence 1122345788999999999999999999999999999999999999754421 1111 112222233
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
.+..+...+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 33345556666677776666666666666553
No 170
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.6e-35 Score=317.68 Aligned_cols=257 Identities=24% Similarity=0.362 Sum_probs=208.9
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||.||+|+.. +++.||||.++... ......+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999965 78999999876422 233456889999999999999999999999889999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 685 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 685 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||+++|+|.+++... ....+++..++.++.|+++||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988642 2345788999999999999999999998 99999999999999999999999999876532
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
.. .......|+..|+|||.+.+..++.++||||||+++|||++|+.||............. +...
T Consensus 159 ~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~--------~~~~ 223 (267)
T cd08228 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK--------IEQC 223 (267)
T ss_pred hh-------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH--------HhcC
Confidence 21 11123457889999999998889999999999999999999999996543211111111 1111
Q ss_pred CCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 843 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 843 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
..+. .+...+..+.+++.+||..+|++||++.++++.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1222 2345667899999999999999999999999998865
No 171
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.6e-35 Score=324.85 Aligned_cols=283 Identities=23% Similarity=0.375 Sum_probs=205.2
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh-hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++++|.+.+.||+|+||.||+|... +|+.||+|++....... ...+.+|+++++.++|+||+++++++...+..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3578999999999999999999864 68999999987543222 346788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||++ +++.+++.... ..+.+..+..++.|++.||+|||+.+ |+|+||||+||+++.++++||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9995 78877765433 34778888899999999999999998 9999999999999999999999999987543221
Q ss_pred CCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
.......++..|+|||++.+. .++.++|||||||++|||++|+.||.......+.....+..
T Consensus 158 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~---------- 220 (291)
T cd07870 158 -------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTV---------- 220 (291)
T ss_pred -------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHH----------
Confidence 111233468899999998764 57889999999999999999999997654432222211110
Q ss_pred CCCCChHHHHHHHHHHH---HhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCC
Q 002289 844 MGSYPSECVEKFIKLAL---KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 920 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~---~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpw 920 (941)
.+.........+..+-. ...... .++... .+..... ......+++.+|+..||++|||++|++.|||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~-~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 221 LGVPTEDTWPGVSKLPNYKPEWFLPC--KPQQLR-------VVWKRLS-RPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred cCCCChhhhhhhhhcccccchhcccc--CCcchh-------hhccccC-CChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 00011111111110000 000000 011111 1111111 2345568999999999999999999999999
Q ss_pred C
Q 002289 921 V 921 (941)
Q Consensus 921 f 921 (941)
|
T Consensus 291 ~ 291 (291)
T cd07870 291 F 291 (291)
T ss_pred C
Confidence 8
No 172
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=8e-36 Score=325.24 Aligned_cols=260 Identities=24% Similarity=0.406 Sum_probs=202.8
Q ss_pred cCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|++.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999996 478999999986542 33346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|..+. .+++..+..++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--- 148 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--- 148 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence 9999997552 3678888999999999999999999 999999999999999999999999998754321
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......... .
T Consensus 149 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~-------------------~ 203 (279)
T cd06619 149 ------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS-------------------L 203 (279)
T ss_pred ------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc-------------------c
Confidence 122346889999999999999999999999999999999999999642110000 0
Q ss_pred CChHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCC
Q 002289 847 YPSECVEKFIKLALKCC-QDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~-~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~ 925 (941)
.+ ... ..|+ ..++...|. ...++...+++.+|+..+|++||+++|+++||||....
T Consensus 204 ~~----~~~----~~~~~~~~~~~~~~---------------~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 204 MP----LQL----LQCIVDEDPPVLPV---------------GQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ch----HHH----HHHHhccCCCCCCC---------------CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 00 000 0111 111111110 11122345788899999999999999999999998765
Q ss_pred CCC
Q 002289 926 SGS 928 (941)
Q Consensus 926 ~~~ 928 (941)
.++
T Consensus 261 ~~~ 263 (279)
T cd06619 261 DGN 263 (279)
T ss_pred Ccc
Confidence 543
No 173
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-35 Score=327.41 Aligned_cols=281 Identities=24% Similarity=0.447 Sum_probs=219.5
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC--------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhc-CCCceeeeeeccc
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 675 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 675 (941)
...++|.+.+.||+|+||.||+|... ....||+|.++.... .....+.+|+++++++ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 34568889999999999999999742 245799998875332 2345788999999999 6999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC--------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcE
Q 002289 676 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 741 (941)
Q Consensus 676 ~~~~~~LV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NI 741 (941)
..+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeE
Confidence 8899999999999999999996532 235888999999999999999999999 99999999999
Q ss_pred EEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCC
Q 002289 742 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 820 (941)
Q Consensus 742 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~ 820 (941)
++++++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 240 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYY-----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI 240 (314)
T ss_pred EEcCCCcEEEccccccccccccccc-----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999865322111 11112224467999999999899999999999999999999 88888643
Q ss_pred chhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccc
Q 002289 821 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINS 900 (941)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~ 900 (941)
.. .+.... +..+.....+..++.++.+++.+|+..+|++||++.++++.|+++.....+ ...++...
T Consensus 241 ~~-~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~---~~~~~~~~ 307 (314)
T cd05099 241 PV-EELFKL---------LREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSE---EYLDLSMP 307 (314)
T ss_pred CH-HHHHHH---------HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcC---CceeeEEe
Confidence 32 111111 111122234455667888999999999999999999999999988765433 33456667
Q ss_pred cCCCCCC
Q 002289 901 EHTSKEE 907 (941)
Q Consensus 901 ~L~~dP~ 907 (941)
+.+++|+
T Consensus 308 ~~~~~~~ 314 (314)
T cd05099 308 FEQYSPS 314 (314)
T ss_pred hhhcCCC
Confidence 7777663
No 174
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.7e-36 Score=337.19 Aligned_cols=203 Identities=27% Similarity=0.318 Sum_probs=173.0
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||+||+++.. +++.||+|++.... ......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999975 68899999986422 122345788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999997532 35888999999999999999999999 9999999999999999999999999997653221
Q ss_pred CCCccccccccccccCCCccccccccc-----CCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
........||+.|+|||++.+ +.++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~ 212 (331)
T cd05624 157 ------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 212 (331)
T ss_pred ------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC
Confidence 111223468999999999875 467889999999999999999999997543
No 175
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.3e-35 Score=325.81 Aligned_cols=264 Identities=27% Similarity=0.496 Sum_probs=211.8
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhc-CCCceeeeeecc
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYC 674 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 674 (941)
++....++|++.+.||+|+||.||+|... ....+|+|.+..... .....+.+|+++++++ +|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34456678899999999999999999864 236899999875432 2345688999999999 899999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhc--------------CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCc
Q 002289 675 DEEGEQMLVYEFMSNGTLRDQLSAK--------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 740 (941)
Q Consensus 675 ~~~~~~~LV~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~N 740 (941)
...+..++||||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceee
Confidence 9999999999999999999999642 2346889999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCC
Q 002289 741 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 819 (941)
Q Consensus 741 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~ 819 (941)
|++++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred EEEcCCCeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCC
Confidence 99999999999999999865432211 11122235678999999998899999999999999999998 9899865
Q ss_pred CchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 820 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
.... +.... +..+.....+..+...+.+++.+|++.+|++||++.++++.|+++.
T Consensus 238 ~~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 238 IPVE-ELFKL---------LKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCHH-HHHHH---------HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 4321 11111 1112222344556778999999999999999999999999998763
No 176
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.7e-35 Score=315.60 Aligned_cols=250 Identities=29% Similarity=0.473 Sum_probs=208.6
Q ss_pred hcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.++|++.+.||+|+||.||+|... |+.||+|.++.... ..+++.+|+.++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888999999999999999874 78999999986544 4568899999999999999999999999899999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 9999999997766557899999999999999999999999 9999999999999999999999999998653211
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.....+..|+|||++.+..++.++||||||+++||+++ |+.||...... ...... .......
T Consensus 157 -------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~--------~~~~~~~ 219 (256)
T cd05039 157 -------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHV--------EKGYRME 219 (256)
T ss_pred -------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH--------hcCCCCC
Confidence 12234568999999998889999999999999999997 99998654321 111111 1111222
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
.+..+++.+.+++.+|+..+|++||++.+++++|+.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 344566788999999999999999999999998875
No 177
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.9e-35 Score=322.54 Aligned_cols=255 Identities=28% Similarity=0.479 Sum_probs=207.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
.+|...++||+|+||.||++... ++..+|+|.+........+.+.+|+++++.++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46777899999999999999742 356899999886655556789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCC-------------CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcE
Q 002289 683 VYEFMSNGTLRDQLSAKSK-------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 749 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~ 749 (941)
||||+++++|.+++..... ..+++..++.++.|++.|++|||+.+ ++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999975432 34789999999999999999999999 9999999999999999999
Q ss_pred EEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002289 750 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 828 (941)
Q Consensus 750 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~ 828 (941)
||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||........ ..
T Consensus 162 kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~ 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-IE 235 (280)
T ss_pred EECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-HH
Confidence 9999999875432211 111122335678999999999999999999999999999998 8999865433211 11
Q ss_pred HHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 829 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
....+.....+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ---------~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 ---------CITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---------HHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11122222334456678899999999999999999999998875
No 178
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.6e-35 Score=316.10 Aligned_cols=249 Identities=27% Similarity=0.446 Sum_probs=200.0
Q ss_pred eeeccCcEEEEEEEeC---CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCC
Q 002289 616 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 691 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 691 (941)
.||+|+||.||+|.+. ++..||+|++...... ..+.+.+|+.++++++|+||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999864 3567999998765332 2457899999999999999999999885 457899999999999
Q ss_pred HHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcccc
Q 002289 692 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 771 (941)
Q Consensus 692 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 771 (941)
|.+++... ...+++..++.++.|++.||+|||+++ ++||||||+||+++.++.+||+|||+++........ .
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~----~ 152 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY----Y 152 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccc----e
Confidence 99998643 345899999999999999999999998 999999999999999999999999999755332210 1
Q ss_pred ccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChH
Q 002289 772 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 850 (941)
Q Consensus 772 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 850 (941)
.......++..|+|||.+.+..++.++|||||||++||+++ |+.||....... ... .+..+.....+..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~---------~~~~~~~~~~~~~ 222 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-VMS---------FIEQGKRLDCPAE 222 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-HHH---------HHHCCCCCCCCCC
Confidence 11122234578999999988889999999999999999996 999997543311 111 1122233345566
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 851 CVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 851 ~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
++.++.+++.+||..+|++||++.++.+.|+.+
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 778899999999999999999999999988865
No 179
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.8e-35 Score=334.20 Aligned_cols=264 Identities=22% Similarity=0.391 Sum_probs=210.3
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCchh-hHhHHHHHHHHHhcC-CCceeeeeecc
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLH-HRNLVSLVGYC 674 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~nIv~l~~~~ 674 (941)
++....++|.+.+.||+|+||.||+|+++ .++.||+|+++...... .+.+.+|++++.++. ||||+++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 45556677888999999999999999853 34689999998643322 346889999999997 99999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhcCC-----------------------------------------------------
Q 002289 675 DEEGEQMLVYEFMSNGTLRDQLSAKSK----------------------------------------------------- 701 (941)
Q Consensus 675 ~~~~~~~LV~e~~~~gsL~~~l~~~~~----------------------------------------------------- 701 (941)
...+..++||||+++|+|.+++++...
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 999999999999999999999965321
Q ss_pred -------------------------------------------CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCC
Q 002289 702 -------------------------------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 738 (941)
Q Consensus 702 -------------------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp 738 (941)
..+++..++.++.|++.||+|||+.+ |+||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCc
Confidence 23677788999999999999999988 99999999
Q ss_pred CcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCC
Q 002289 739 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPI 817 (941)
Q Consensus 739 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf 817 (941)
+|||+++++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~ 342 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSN-----YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY 342 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccc-----cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999976432211 011122346788999999998889999999999999999998 88898
Q ss_pred CCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 818 SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
............ +..+.....+..++..+.+++.+||..+|.+||++.++++.|+.+
T Consensus 343 ~~~~~~~~~~~~---------~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 343 PELPMNEQFYNA---------IKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred CCCCchHHHHHH---------HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 643321111111 111112234555678899999999999999999999999999875
No 180
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.6e-35 Score=318.63 Aligned_cols=255 Identities=29% Similarity=0.452 Sum_probs=204.4
Q ss_pred CCccceeeccCcEEEEEEEeC-C---CcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCc-----
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 679 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 679 (941)
|++.+.||+|+||.||+|... + +..||+|+++.... .....+.+|++.++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567889999999999999864 2 37899999875432 234578999999999999999999998865443
Q ss_pred -EEEEEecCCCCCHHHHHhhc----CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeee
Q 002289 680 -QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 754 (941)
Q Consensus 680 -~~LV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DF 754 (941)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 79999999999999988542 2346899999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhh
Q 002289 755 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833 (941)
Q Consensus 755 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~ 833 (941)
|+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||....+. +..
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-~~~------ 225 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-EIY------ 225 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHH------
Confidence 999865432211 11112234678999999988899999999999999999999 88888654431 111
Q ss_pred ccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
..+..+.....+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 226 ---DYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---HHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11222333345566778899999999999999999999999998865
No 181
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.2e-35 Score=321.43 Aligned_cols=257 Identities=28% Similarity=0.471 Sum_probs=205.5
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCC------CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCc
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 679 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 679 (941)
..++|.+.+.||+|+||.||+|.+.+ +..||+|....... ..+..+.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 35678899999999999999999743 57899998875432 334578999999999999999999999988889
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-----CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC---cEEE
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKV 751 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~---~~kl 751 (941)
.++||||+++++|.++++.... ..+++..+++++.||+.||+|||+++ ++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976432 35899999999999999999999999 99999999999998754 6999
Q ss_pred eeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002289 752 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 830 (941)
Q Consensus 752 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~ 830 (941)
+|||+++....... .........+..|+|||++.+..++.++|||||||++|||++ |+.||...... +....
T Consensus 161 ~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~~~~~- 233 (277)
T cd05036 161 ADFGMARDIYRASY-----YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-EVMEF- 233 (277)
T ss_pred ccCccccccCCccc-----eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH-
Confidence 99999986532111 001112223568999999999999999999999999999997 99999754331 11111
Q ss_pred HhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 831 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
+........+..++..+.+++.+|++.+|++||++.+++++|+
T Consensus 234 --------~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 --------VTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred --------HHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111222345556678999999999999999999999998875
No 182
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.2e-35 Score=329.74 Aligned_cols=284 Identities=24% Similarity=0.329 Sum_probs=204.9
Q ss_pred CCCccceeeccCcEEEEEEEeC---CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccC--CcEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQM 681 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~ 681 (941)
+|++.++||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999974 47899999988633 22235678899999999999999999999887 7899
Q ss_pred EEEecCCCCCHHHHHhhc---CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC----CCcEEEeee
Q 002289 682 LVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH----KFTAKVADF 754 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~----~~~~kl~DF 754 (941)
+||||++ +++.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 5787776532 2236889999999999999999999999 999999999999999 999999999
Q ss_pred ccccccCCCCCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhh
Q 002289 755 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833 (941)
Q Consensus 755 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~ 833 (941)
|+++........ ........++..|+|||++.+. .++.++|||||||+++||++|+.||......... ...
T Consensus 157 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~-~~~--- 228 (316)
T cd07842 157 GLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKK-SNP--- 228 (316)
T ss_pred ccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccc-cch---
Confidence 999865432210 1112334578899999988764 5789999999999999999999999643321100 000
Q ss_pred ccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH----------------HHHHHhHhhCCCCCCCCccc
Q 002289 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM----------------RELESIWNMMPESDTKTPEF 897 (941)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~----------------~~L~~~~~~~~~~~~~~~dl 897 (941)
.....+.+++..+-...+..++.+.+.. ..+..........+....++
T Consensus 229 ----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (316)
T cd07842 229 ----------------FQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDL 292 (316)
T ss_pred ----------------hHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHH
Confidence 0001111111111111111111111100 00111111112445567789
Q ss_pred ccccCCCCCCCCCCCccCCCCCCC
Q 002289 898 INSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 898 l~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
+.+||+.||++|||++|+++||||
T Consensus 293 i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 293 LRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhcCCcccCcCHHHHhcCCCC
Confidence 999999999999999999999998
No 183
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.4e-35 Score=324.29 Aligned_cols=268 Identities=23% Similarity=0.366 Sum_probs=210.6
Q ss_pred cCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.+|++.+.||.|+||+||+|.. .+++.||+|.+........+.+.+|+++++.++|+||+++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688899999999999999986 478999999987655555667899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++++|.+++... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 999999998543 4889999999999999999999999 9999999999999999999999999987543221
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
.......++..|+|||.+.+..++.++|||||||++|||++|+.||............ ... . ......
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~-~~~-~------~~~~~~ 237 (296)
T cd06655 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-ATN-G------TPELQN 237 (296)
T ss_pred ----ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-Hhc-C------CcccCC
Confidence 1122345788999999999888999999999999999999999999754432111000 000 0 000000
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCCCC
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 927 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~~ 927 (941)
+. ...+...+++.+|+..||++||++.+++.||||......
T Consensus 238 ~~---------------------------------------~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~ 278 (296)
T cd06655 238 PE---------------------------------------KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL 278 (296)
T ss_pred cc---------------------------------------cCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcccc
Confidence 00 011223357777888888888999999999999877766
Q ss_pred Ccccccccc
Q 002289 928 SNLVSGVIP 936 (941)
Q Consensus 928 ~~~~~~~~~ 936 (941)
+.+..+..|
T Consensus 279 ~~~~~~~~~ 287 (296)
T cd06655 279 SSLTPLILA 287 (296)
T ss_pred ccCCccccc
Confidence 665555433
No 184
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.1e-35 Score=323.64 Aligned_cols=258 Identities=27% Similarity=0.459 Sum_probs=206.2
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CC--cEEEEEEeccCC-chhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DG--TVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV 683 (941)
++|++.+.||+|+||.||+|... ++ ..+++|.++... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57888999999999999999875 33 357888887432 23346789999999999 799999999999998999999
Q ss_pred EecCCCCCHHHHHhhcC--------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcE
Q 002289 684 YEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 749 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~ 749 (941)
|||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999996532 134888999999999999999999998 9999999999999999999
Q ss_pred EEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002289 750 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 828 (941)
Q Consensus 750 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~ 828 (941)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||...... +...
T Consensus 159 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYE 229 (297)
T ss_pred EECCcCCCccccce--------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Confidence 99999998643211 00111123457999999998899999999999999999997 99999754321 1111
Q ss_pred HHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002289 829 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887 (941)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 887 (941)
.+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+.+....
T Consensus 230 ---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 230 ---------KLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred ---------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11112222344556678899999999999999999999999998876543
No 185
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=323.05 Aligned_cols=289 Identities=21% Similarity=0.301 Sum_probs=218.2
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcC-C-C----ceeeeeeccccCCc
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-H-R----NLVSLVGYCDEEGE 679 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----nIv~l~~~~~~~~~ 679 (941)
.+++|.+...+|+|.||.|-.+.++ .+..||||+++... ...+..+-|+++++++. + | -++.+.+||...++
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 3789999999999999999999865 47899999998533 23446678999999994 2 2 37889999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC--------------
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------------- 745 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-------------- 745 (941)
.|+|+|.+ |.|+.+++..++-.+++...++.|+.|++++++|||+.+ ++|.||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccc
Confidence 99999999 779999999888889999999999999999999999999 999999999999932
Q ss_pred ------CCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 746 ------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 746 ------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
+..++|+|||.|+.... ....++.|..|+|||++.+-.++.++||||+||||+|+.||...|..
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e----------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHE----------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred eeccCCCcceEEEecCCcceecc----------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 34699999999986432 22556788999999999999999999999999999999999999976
Q ss_pred CchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHH-----HHHHHHhcc--cCCCCCCCHHHHHHHHHHhHhhC---CC
Q 002289 820 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF-----IKLALKCCQ--DETDARPSMSEVMRELESIWNMM---PE 889 (941)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~l~~~c~~--~~p~~RPs~~~v~~~L~~~~~~~---~~ 889 (941)
-++..... +.+.+ ++++|.....+- ..-. +++ .....| .+..+.+........+ ..
T Consensus 312 Hen~EHLa--------MMerI---lGp~P~~mi~r~~~~Kyf~~~--rldw~e~~~~~-~~k~v~~~ckpl~~~~~~~d~ 377 (415)
T KOG0671|consen 312 HENLEHLA--------MMERI---LGPIPSRMIKKTRKEKYFRRG--RLDWPEVSSKG-KSKYVFEPCKPLKKYMLQDDL 377 (415)
T ss_pred CCcHHHHH--------HHHHh---hCCCcHHHhhhhhhHhhhhcc--cccCccccccc-cchhhhcCCccHHHHhccCcH
Confidence 55433221 11112 234444433322 1111 222 111111 1222222222222222 22
Q ss_pred CCCCCcccccccCCCCCCCCCCCccCCCCCCCCCC
Q 002289 890 SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 924 (941)
Q Consensus 890 ~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~ 924 (941)
+..++.|||++||.+||.+|+|+.|||.||||..-
T Consensus 378 e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 378 EHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred HHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 33446789999999999999999999999999863
No 186
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8.2e-35 Score=314.72 Aligned_cols=256 Identities=25% Similarity=0.417 Sum_probs=211.0
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999976 78999999886422 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 685 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 685 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 3356899999999999999999999999 99999999999999999999999999876533
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCch-hHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-IVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~-~~~~~~~~~~~~~~~~~~~ 841 (941)
.. .......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ..+... ....
T Consensus 159 ~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---------~~~~ 222 (267)
T cd08224 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK---------KIEK 222 (267)
T ss_pred CC-------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHh---------hhhc
Confidence 21 111234578899999999998899999999999999999999999965432 111111 1111
Q ss_pred CCCCCCCh-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 842 GNMGSYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 842 ~~~~~~~~-~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
+.....+. .+...+.+++.+|+..+|++||++.++++.++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 223 CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 22333333 5667899999999999999999999999998875
No 187
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.3e-35 Score=321.02 Aligned_cols=266 Identities=27% Similarity=0.429 Sum_probs=205.0
Q ss_pred cCC-CccceeeccCcEEEEEEEe-----CCCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccC--Cc
Q 002289 609 NNF-NSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GE 679 (941)
Q Consensus 609 ~~y-~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~ 679 (941)
++| +..+.||+|+||+||++.. .+++.||+|.++.... ...+.+.+|++++++++||||+++++++... ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 344 7889999999999988653 3578999999876432 3356788999999999999999999987553 46
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
.++||||+++++|.+++... .+++..++.++.|+++||+|||+++ |+||||||+||++++++.+||+|||+++.
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccc
Confidence 78999999999999999653 4899999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHH-HHHHH---hhcc
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE-VNIAY---QSSM 835 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~-~~~~~---~~~~ 835 (941)
....... ........++..|+|||.+.+..++.++||||||+++|||++|+.||......... ..... ....
T Consensus 157 ~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05080 157 VPEGHEY----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVR 232 (283)
T ss_pred cCCcchh----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhh
Confidence 5432110 01112223566799999999888999999999999999999999998643321110 00000 0001
Q ss_pred chhhhc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 836 MFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 836 ~~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
....++ ......+..++..+.+++..||+.+|++||++.++++.++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 233 LIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111 1122335566788999999999999999999999999998763
No 188
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.6e-35 Score=315.98 Aligned_cols=248 Identities=27% Similarity=0.414 Sum_probs=199.6
Q ss_pred eeeccCcEEEEEEEeC---CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCC
Q 002289 616 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
.||+|+||.||+|.++ ++..||+|+++.... ...+++.+|+.+++.++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 578999999875432 23567899999999999999999999885 45678999999999
Q ss_pred CHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccc
Q 002289 691 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 770 (941)
Q Consensus 691 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 770 (941)
+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~---- 151 (257)
T cd05116 81 PLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY---- 151 (257)
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe----
Confidence 9999996543 5889999999999999999999999 999999999999999999999999999865432210
Q ss_pred cccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 771 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 771 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
........++..|+|||.+....++.++|||||||++|||++ |+.||..... .+.... +..+.....|.
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~---------i~~~~~~~~~~ 221 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-NEVTQM---------IESGERMECPQ 221 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH---------HHCCCCCCCCC
Confidence 011122234578999999988889999999999999999998 9999975432 111111 11122334556
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
.++.++.+++..||+.+|++||++.+|.+.|++.
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 6778899999999999999999999999998764
No 189
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.9e-35 Score=314.60 Aligned_cols=248 Identities=28% Similarity=0.463 Sum_probs=199.7
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
+.||+|+||.||+|++. +++.||+|.+.... ......+.+|++++++++|+||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999975 78999999876433 23346789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-----~~ 151 (252)
T cd05084 81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-----AS 151 (252)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccc-----cc
Confidence 99996543 35889999999999999999999999 99999999999999999999999999875432110 00
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHH
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 851 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (941)
......++..|+|||.+.++.++.++|||||||++|||++ |..||....... ... .+........+..+
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~--------~~~~~~~~~~~~~~ 221 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TRE--------AIEQGVRLPCPELC 221 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHH--------HHHcCCCCCCcccC
Confidence 0111123457999999999899999999999999999998 888886443211 111 11111222345566
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 852 VEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 852 ~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
+..+.+++.+|++.+|++||++.++.+.|+
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 778999999999999999999999998875
No 190
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=336.36 Aligned_cols=250 Identities=25% Similarity=0.445 Sum_probs=198.3
Q ss_pred cceeeccCcEEEEEEEeC-CCcEEEEEEecc----CCchhhHhHHHHHHHHHhcCCCceeeeeeccccCC--cEEEEEec
Q 002289 614 STQIGQGGYGKVYKGILP-DGTVVAVKRAQE----GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVYEF 686 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~LV~e~ 686 (941)
..+||+|+|-+||+|.+. +|..||--.++. ......++|..|+++|+.|+|+||+++++++.+.. ...+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 467999999999999975 577776432221 12333478999999999999999999999986654 47899999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-~~~~kl~DFGla~~~~~~~~ 765 (941)
|..|+|..|+.+..+ .+....+.|++||++||.|||++. |||||||||.+||+|+. .|.|||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s-- 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS-- 199 (632)
T ss_pred ccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhcc--
Confidence 999999999977654 778899999999999999999975 89999999999999975 589999999999876432
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
....+.|||.|||||... ..|++.+||||||++++||+|+.+||....+..+.++.. +.+..+
T Consensus 200 -------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV---------~SGiKP 262 (632)
T KOG0584|consen 200 -------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV---------TSGIKP 262 (632)
T ss_pred -------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH---------HcCCCH
Confidence 234478999999999987 789999999999999999999999998777655444332 222111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 924 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~ 924 (941)
. .+ ....+++..+||.+||.. .++|+||.|+|.||||+.+
T Consensus 263 ----~---sl-------------------------------~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 263 ----A---AL-------------------------------SKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ----H---Hh-------------------------------hccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 0 00 011244555677777777 8889999999999999875
No 191
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.2e-35 Score=335.29 Aligned_cols=290 Identities=22% Similarity=0.320 Sum_probs=213.3
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC--CchhhHhHHHHHHHHHhcCCCceeeeeeccccC------
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 677 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 677 (941)
..++|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|++++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999965 7899999998643 223345678899999999999999999987543
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
...++||||++ ++|.+.+... +++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 6898887543 788899999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
+...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||........+...
T Consensus 166 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~-------- 229 (353)
T cd07850 166 RTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKI-------- 229 (353)
T ss_pred eeCCCCC--------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHH--------
Confidence 8653211 122345788999999999999999999999999999999999999765443222111
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhHhh---CCCCCCCCcccccccCCCCCCCCCCCc
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNM---MPESDTKTPEFINSEHTSKEETPPSSS 913 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~~---~~~~~~~~~dll~~~L~~dP~~R~sa~ 913 (941)
+ ...+..+.++...+...........+..++ .+.++.......... .......+.++|.+||++||++|||+.
T Consensus 230 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 306 (353)
T cd07850 230 --I-EQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVD 306 (353)
T ss_pred --H-HhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHH
Confidence 1 112333444444444333333333332221 222221110000000 001223456899999999999999999
Q ss_pred cCCCCCCCCC
Q 002289 914 SMLKHPYVSS 923 (941)
Q Consensus 914 e~L~Hpwf~~ 923 (941)
|+|.||||..
T Consensus 307 eiL~~~~~~~ 316 (353)
T cd07850 307 DALQHPYINV 316 (353)
T ss_pred HHhcChhHhh
Confidence 9999999864
No 192
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.3e-35 Score=318.77 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=203.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCc----EEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
++|++.+.||+|+||+||+|.+. +++ .|++|.+...... ...++..|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 56788899999999999999964 444 4777877543222 23567788889999999999999998864 45789
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999997543 35899999999999999999999998 99999999999999999999999999986532
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
... ........++..|+|||++.++.++.++|||||||++||+++ |+.||....... ...... .
T Consensus 162 ~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~--------~ 226 (279)
T cd05111 162 DDK-----KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLLE--------K 226 (279)
T ss_pred CCc-----ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH--------C
Confidence 211 111233456778999999999999999999999999999998 999996543211 111111 1
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
+.....+..+...+..++.+||..+|.+||++.++++.+..+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 227 GERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 112222334556788899999999999999999999999887653
No 193
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.6e-35 Score=320.21 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=209.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCC-----CcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeecccc-CCc
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGE 679 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~ 679 (941)
..++|++.+.||+|+||.||+|.+.+ +..|++|++.... ....+.+.+|+.++++++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 46788999999999999999999765 6889999887543 2335678899999999999999999998765 567
Q ss_pred EEEEEecCCCCCHHHHHhhcCC------CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEee
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSK------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 753 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~D 753 (941)
.++++||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 8999999999999999865322 46899999999999999999999998 99999999999999999999999
Q ss_pred eccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHh
Q 002289 754 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 832 (941)
Q Consensus 754 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~ 832 (941)
||+++.+...+. ........++..|+|||++.+..++.++|||||||++||+++ |+.||..... .+....
T Consensus 161 ~g~~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~--- 231 (280)
T cd05043 161 NALSRDLFPMDY-----HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-FEMAAY--- 231 (280)
T ss_pred CCCcccccCCce-----EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-HHHHHH---
Confidence 999986533221 011122345678999999998889999999999999999999 9999975432 111111
Q ss_pred hccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 833 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
+..+.....+..++..+.+++.+||..+|++||++.++++.|+.+..
T Consensus 232 ------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 232 ------LKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred ------HHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11111122334456788999999999999999999999999998754
No 194
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-35 Score=324.30 Aligned_cols=262 Identities=26% Similarity=0.480 Sum_probs=209.2
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC--------CCcEEEEEEeccCC-chhhHhHHHHHHHHHhc-CCCceeeeeecccc
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 676 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 676 (941)
..++|.+.+.||+|+||.||+|... ++..+|+|.++... ......+.+|+++++.+ +|+||+++++++..
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 3467999999999999999999752 23579999987543 23345688899999999 79999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCC--------------CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEE
Q 002289 677 EGEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 742 (941)
Q Consensus 677 ~~~~~LV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NIL 742 (941)
.+..++||||+++|+|.+++..+.. ..+++..++.++.|++.||+|||+++ ++||||||+||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nil 172 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL 172 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheE
Confidence 9999999999999999999975421 35888999999999999999999998 999999999999
Q ss_pred EcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCc
Q 002289 743 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 821 (941)
Q Consensus 743 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~ 821 (941)
++.++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred EcCCCcEEECCCcccccccccchh-----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 999999999999998765322110 11112224568999999999889999999999999999998 888885432
Q ss_pred hhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
..+.... . ........+..++..+.+++.+|+..+|++||++.++++.|+++...
T Consensus 248 -~~~~~~~-~--------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 -VEELFKL-L--------KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred -HHHHHHH-H--------HcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1111111 1 11112234556678899999999999999999999999999987653
No 195
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.4e-35 Score=315.70 Aligned_cols=250 Identities=24% Similarity=0.379 Sum_probs=207.5
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
+|++.+.||+|+||.||++... +++.||+|.++... ....+.+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 5788899999999999999965 68999999886432 333467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++|+|.+++.......+++..++.++.|++.||.|||+++ |+|+||||+||++++++.++++|||.++......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 154 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--- 154 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc---
Confidence 9999999987655566899999999999999999999999 9999999999999999999999999987653221
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||...... .... .+..+.....
T Consensus 155 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~~~~ 220 (255)
T cd08219 155 ----AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-NLIL---------KVCQGSYKPL 220 (255)
T ss_pred ----cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-HHHH---------HHhcCCCCCC
Confidence 1122345888999999999988999999999999999999999999754321 1111 1122233344
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
+..++..+.+++.+||+.+|++||++.+++..
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 55667788999999999999999999998753
No 196
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-35 Score=321.44 Aligned_cols=257 Identities=28% Similarity=0.462 Sum_probs=208.5
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCC------CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCc
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 679 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 679 (941)
..++|++.+.||+|+||.||+|...+ +..||+|.+..... .....+.+|+.+++.++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 45688899999999999999998642 36899999875432 334578899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC--------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEE
Q 002289 680 QMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 751 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl 751 (941)
.++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEE
Confidence 999999999999999996532 224688899999999999999999998 999999999999999999999
Q ss_pred eeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002289 752 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 830 (941)
Q Consensus 752 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~ 830 (941)
+|||+++.....+. ........++..|+|||.+.+..++.++|||||||++||+++ |+.||...... +...
T Consensus 161 ~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~-- 232 (277)
T cd05032 161 GDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-EVLK-- 232 (277)
T ss_pred CCcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH-HHHH--
Confidence 99999876533221 111223346788999999998889999999999999999998 88898643321 1111
Q ss_pred HhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 831 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
.+..+.....+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 233 -------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 -------FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11222333455666788999999999999999999999998775
No 197
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=9.4e-36 Score=325.62 Aligned_cols=279 Identities=24% Similarity=0.359 Sum_probs=207.2
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|+..+.||+|+||.||+|+.+ +|+.||+|++..... ...+.+.+|++++++++|+||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 47888999999999999999976 689999998864322 224567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|..++... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998888877543 34899999999999999999999998 99999999999999999999999999986543211
Q ss_pred CCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||................ ..++.
T Consensus 156 -------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~--- 222 (286)
T cd07847 156 -------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTL---GDLIP--- 222 (286)
T ss_pred -------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh---CCCCh---
Confidence 1223357789999999876 557889999999999999999999997554322111110000 00000
Q ss_pred CCCChHHHHHHHH---HHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 845 GSYPSECVEKFIK---LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 845 ~~~~~~~~~~l~~---l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
. ...+.. .........+..+++... ..+..+....+|+.+|+..||++||++.|++.||||
T Consensus 223 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 223 -----R-HQQIFSTNQFFKGLSIPEPETREPLES----------KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred -----H-HhhhcccccccccccCCCcccccCHHH----------HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 000000 000001112222222211 122335566789999999999999999999999998
No 198
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.8e-35 Score=316.37 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=208.4
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
...++|++.+.||+|+||.||+|.+.++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.. ...++|||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 3457889999999999999999998778889999887533 234578899999999999999999999877 78899999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|.+++.......+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 999999999997765566889999999999999999999998 99999999999999999999999999976532211
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......++..|+|||++.+..++.++|+|||||++||+++ |+.||......... . .. ..+..
T Consensus 158 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~-~-~~--------~~~~~ 221 (260)
T cd05073 158 ------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-R-AL--------ERGYR 221 (260)
T ss_pred ------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHH-H-HH--------hCCCC
Confidence 11112335678999999998889999999999999999999 89998654331111 1 10 11111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
...+...+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 222 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 22334556778999999999999999999999998874
No 199
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4e-36 Score=323.51 Aligned_cols=198 Identities=36% Similarity=0.588 Sum_probs=172.1
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhH--hHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEK--EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
|++.+.||+|+||+||+++.. +++.||+|++......... ...+|+.++++++|+||+++++++...+..++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567889999999999999976 5779999999876544432 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++++|.+++... ..+++..++.++.|+++||+|||+.+ |+|+||||+||+++.++.++|+|||.+......
T Consensus 81 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---- 151 (260)
T PF00069_consen 81 PGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN---- 151 (260)
T ss_dssp TTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTST----
T ss_pred cccccccccccc--cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc----
Confidence 999999999733 34899999999999999999999999 999999999999999999999999998753111
Q ss_pred ccccccccccccCCCcccccccc-cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
........++..|+|||++. +..++.++||||+|+++|+|++|..||...
T Consensus 152 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 152 ---NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp ---TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred ---ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22334456888999999998 788999999999999999999999999754
No 200
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.8e-35 Score=319.89 Aligned_cols=267 Identities=28% Similarity=0.434 Sum_probs=205.2
Q ss_pred cCCCccceeeccCcEEEEEEEe-----CCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeecccc--CCcEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQM 681 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~ 681 (941)
.+|++.+.||+|+||+||+|.. .+++.||+|.++.......+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4788899999999999999974 2578999999887655556788999999999999999999998643 34689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999996543 35899999999999999999999999 9999999999999999999999999998664
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchh-HHHHHHHHh----hccc
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI-VREVNIAYQ----SSMM 836 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~-~~~~~~~~~----~~~~ 836 (941)
..... ........++..|+|||++.+..++.++|||||||++|||++|..++...... .+....... ...+
T Consensus 160 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 160 QDKEY----YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred CCCcc----eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 32210 00111122345699999999889999999999999999999988776432211 000000000 0000
Q ss_pred hhhhc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 837 FSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 837 ~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
.+.+. ......+..++..+.+++.+||..+|++||++.++++.|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11111 112233455667899999999999999999999999998865
No 201
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.9e-35 Score=314.72 Aligned_cols=249 Identities=29% Similarity=0.472 Sum_probs=203.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeecc-ccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~LV~e~ 686 (941)
..+|++.+.||+|+||.||+|... |..||+|..+... ..+.+.+|+.++++++|+|++++++++ ...+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 357888999999999999999864 7889999886532 245789999999999999999999976 455678999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.......+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999999997766566899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
....++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..... ..+...
T Consensus 157 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-~~~~~~~---------~~~~~~ 218 (256)
T cd05082 157 --------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KDVVPRV---------EKGYKM 218 (256)
T ss_pred --------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHH---------hcCCCC
Confidence 12234568999999998899999999999999999998 9999864321 1111110 111112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
..++.++..+.+++.+|++.+|++||++.++++.|+.
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 3345567789999999999999999999999998875
No 202
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=5e-35 Score=323.01 Aligned_cols=288 Identities=26% Similarity=0.407 Sum_probs=225.7
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCc----EEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
.++|+..+.||+|+||.||+|.+. +|. .||+|.+...... ...++.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 456778899999999999999864 443 5788988754332 234688999999999999999999998654 567
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence 9999999999999986543 35788999999999999999999998 9999999999999999999999999998654
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||..... +.......
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~-------- 225 (303)
T cd05110 161 GDEK-----EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLE-------- 225 (303)
T ss_pred Cccc-----ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH--------
Confidence 2211 111122345678999999999999999999999999999998 8899865321 11111111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCC
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 920 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpw 920 (941)
.+.....+..+...+.+++..||..+|++||++.++++.++.+... -.+.+.+.++.|+.+...-.|||
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 294 (303)
T cd05110 226 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD-----------PQRYLVIQGDDRMKLPSPNDSKF 294 (303)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc-----------hhhheeeccCCcCCCCCCchhhH
Confidence 1111223344567789999999999999999999999998876432 12347788999999999999999
Q ss_pred CCCCCC
Q 002289 921 VSSDVS 926 (941)
Q Consensus 921 f~~~~~ 926 (941)
|..-+.
T Consensus 295 ~~~~~~ 300 (303)
T cd05110 295 FQNLLD 300 (303)
T ss_pred Hhcccc
Confidence 987543
No 203
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-35 Score=325.46 Aligned_cols=281 Identities=25% Similarity=0.360 Sum_probs=206.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh--hHhHHHHHHHHHhcCCCceeeeeeccccC--CcEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 683 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~LV 683 (941)
++|++.+.||+|+||.||+|.++ +++.||+|.++...... ...+.+|++++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999976 58999999987543222 34567899999999999999999998766 899999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||++ ++|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 59999886543 36899999999999999999999999 999999999999999999999999998865432
Q ss_pred CCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
. .......++..|+|||.+.+. .++.++|+||+|+++|||++|+.||........ ..... .
T Consensus 160 ~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~----------~ 221 (293)
T cd07843 160 L-------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIF----------K 221 (293)
T ss_pred c-------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH----------H
Confidence 1 111234467899999998764 468899999999999999999999975443211 11110 0
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCC--CCCCcccccccCCCCCCCCCCCccCCCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES--DTKTPEFINSEHTSKEETPPSSSSMLKHPY 920 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~--~~~~~dll~~~L~~dP~~R~sa~e~L~Hpw 920 (941)
..+......+..+..+...- .....++....+ ...++.. .+...++|++||+.||++|||++|+|.|||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~ 292 (293)
T cd07843 222 LLGTPTEKIWPGFSELPGAK--KKTFTKYPYNQL-------RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292 (293)
T ss_pred HhCCCchHHHHHhhccchhc--ccccccccchhh-------hccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence 11111111122211111000 000011111111 1222322 555678999999999999999999999999
Q ss_pred C
Q 002289 921 V 921 (941)
Q Consensus 921 f 921 (941)
|
T Consensus 293 f 293 (293)
T cd07843 293 F 293 (293)
T ss_pred C
Confidence 8
No 204
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-35 Score=323.54 Aligned_cols=263 Identities=25% Similarity=0.488 Sum_probs=210.7
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC--------CCcEEEEEEeccCC-chhhHhHHHHHHHHHhc-CCCceeeeeeccc
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 675 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 675 (941)
...++|.+.+.||+|+||.||+|+.. ++..||+|...... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 45678889999999999999999741 24579999887533 23346789999999999 8999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC--------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcE
Q 002289 676 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 741 (941)
Q Consensus 676 ~~~~~~LV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NI 741 (941)
..+..++||||+++|+|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceE
Confidence 9999999999999999999997532 235788899999999999999999999 99999999999
Q ss_pred EEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCC
Q 002289 742 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 820 (941)
Q Consensus 742 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~ 820 (941)
++++++.+||+|||.++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred EEcCCCcEEECCCccceeccccccc-----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 9999999999999999865432211 11222345678999999999889999999999999999998 77887543
Q ss_pred chhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 821 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
. ..+..... ..+.....+..++..+.+++.+||+.+|++||++.++++.|+++...
T Consensus 244 ~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 P-VEELFKLL---------KEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred C-HHHHHHHH---------HcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2 22221111 11112233456678899999999999999999999999999988654
No 205
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=335.62 Aligned_cols=256 Identities=29% Similarity=0.446 Sum_probs=212.9
Q ss_pred CccceeeccCcEEEEEEEe-CCC----cEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 612 NSSTQIGQGGYGKVYKGIL-PDG----TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 612 ~~~~~lG~G~fg~Vy~~~~-~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
...++||+|+||+||+|.| ..| -+||+|++.... .+..+++.+|+-+|.+++|||+++++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3467999999999999996 344 468999887543 334678999999999999999999999998765 889999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
||+.|+|.|+++.+ +..+..+..+.|..|||+||.|||.+. +|||||.++||||.+-..+||.|||+|+.+..++.
T Consensus 778 ~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred hcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 99999999999764 456888999999999999999999988 99999999999999999999999999998865543
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
+- ......-.+.|||-|.+....|+.++|||||||++||++| |..|++.... +.+. ..+-++.+
T Consensus 854 ey-----~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--~eI~--------dlle~geR 918 (1177)
T KOG1025|consen 854 EY-----SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--EEIP--------DLLEKGER 918 (1177)
T ss_pred cc-----cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--HHhh--------HHHhcccc
Confidence 21 1122234568999999999999999999999999999999 9999975432 1111 11233555
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 887 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 887 (941)
.+.|+.|..+++.++.+||..|+..||+++++...+.++.+..
T Consensus 919 LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 919 LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 6788999999999999999999999999999999888775543
No 206
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.7e-35 Score=319.83 Aligned_cols=258 Identities=30% Similarity=0.486 Sum_probs=206.3
Q ss_pred CCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
+|++.+.||+|+||.||+|... ....+|+|.+..... .....+.+|+++++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999853 235789998875433 234578899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC----------------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCc
Q 002289 683 VYEFMSNGTLRDQLSAKS----------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 740 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~N 740 (941)
|+||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999986421 235788999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCC
Q 002289 741 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 819 (941)
Q Consensus 741 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~ 819 (941)
|++++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999765322110 11122345678999999988899999999999999999999 9989864
Q ss_pred CchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 820 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
... .+.... . ........+..++..+.+++..|++.+|++||++.++++.|+++..
T Consensus 233 ~~~-~~~~~~-~--------~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 233 IAP-ERLFNL-L--------KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCH-HHHHHH-H--------hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 332 111111 1 0111222345566789999999999999999999999999998753
No 207
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.8e-35 Score=317.58 Aligned_cols=201 Identities=25% Similarity=0.387 Sum_probs=172.9
Q ss_pred hcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
.++|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++|+||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 45789999999999999999996 46899999998765444455688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.++++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 88 CGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 99999999986543 5889999999999999999999998 9999999999999999999999999997653211
Q ss_pred CccccccccccccCCCcccccccc---cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 161 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 161 -----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 1112345788999999984 345788999999999999999999998643
No 208
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5.6e-36 Score=327.49 Aligned_cols=280 Identities=26% Similarity=0.384 Sum_probs=207.2
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|++.+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|+++++.++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999976 589999998764322 234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|.++.... ..+++..++.++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999998877543 24899999999999999999999998 9999999999999999999999999987653321
Q ss_pred CCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||.............. ..
T Consensus 155 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------~~---- 217 (286)
T cd07846 155 ------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIK-------CL---- 217 (286)
T ss_pred ------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH-------Hh----
Confidence 11223457889999999875 4578899999999999999999988865543222111110 00
Q ss_pred CCCChHHHHHHH--HHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 845 GSYPSECVEKFI--KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 845 ~~~~~~~~~~l~--~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
..........+. .+..... .|. ..+. .......+.......+|+.+|+..+|++||+++++++||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 218 GNLIPRHQEIFQKNPLFAGMR--LPE----VKEI----EPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred CCCchhhHHHhccchHhhccc--ccc----ccCc----chHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000000000000 0000011 111 0000 01111234455667789999999999999999999999998
No 209
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.4e-35 Score=326.43 Aligned_cols=281 Identities=27% Similarity=0.401 Sum_probs=207.3
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch-----hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
+|++.+.||+|+||.||+|... +++.||||.+...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999975 6899999998764432 234677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||+ +|+|.+++.... ..+++..++.++.||++||+|||+++ |+|+||||+||+++.++.++|+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 899999997544 36899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
. .......++..|+|||.+.+ ..++.++|||||||++|||++|..||....+.. ....... .
T Consensus 156 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~------~--- 218 (298)
T cd07841 156 N-------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFE------A--- 218 (298)
T ss_pred C-------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHH------H---
Confidence 1 11122346778999999865 467889999999999999999977775443321 1111110 0
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
..............+...+... ..+... ....+........+++.+||..||++|||++|++.||||+
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~ 286 (298)
T cd07841 219 -LGTPTEENWPGVTSLPDYVEFK---PFPPTP--------LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286 (298)
T ss_pred -cCCCchhhhhhccccccccccc---ccCCcc--------hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence 0111111111111111111100 011100 0111223344567899999999999999999999999998
Q ss_pred CC
Q 002289 923 SD 924 (941)
Q Consensus 923 ~~ 924 (941)
+.
T Consensus 287 ~~ 288 (298)
T cd07841 287 ND 288 (298)
T ss_pred CC
Confidence 74
No 210
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5e-36 Score=335.10 Aligned_cols=193 Identities=26% Similarity=0.358 Sum_probs=161.4
Q ss_pred eeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---hHhHHHHHHHHHhc---CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
||+|+||+||+|+.. +++.||||++....... ...+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999965 68999999986432221 22345566766655 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~----- 150 (330)
T cd05586 81 GELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN----- 150 (330)
T ss_pred ChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-----
Confidence 99999986543 4889999999999999999999999 9999999999999999999999999987532211
Q ss_pred ccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......||..|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~ 201 (330)
T cd05586 151 --KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED 201 (330)
T ss_pred --CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC
Confidence 112345689999999998764 47899999999999999999999997543
No 211
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.8e-36 Score=352.18 Aligned_cols=292 Identities=20% Similarity=0.244 Sum_probs=200.5
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCC--CcEEEEE------------------EeccCCchhhHhHHHHHHHHHhcCCCc
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVK------------------RAQEGSLQGEKEFLTEIQFLSRLHHRN 666 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~h~n 666 (941)
..++|++.++||+|+||+||++..+. +..+++| .+.. .......+.+|++++++++|+|
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCC
Confidence 35789999999999999999987532 2222222 1111 1122356789999999999999
Q ss_pred eeeeeeccccCCcEEEEEecCCCCCHHHHHhhcC---CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE
Q 002289 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743 (941)
Q Consensus 667 Iv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl 743 (941)
|+++++++...+..++|+|++ +++|.+++.... ........++.++.|++.||+|||+++ ||||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence 999999999999999999999 568888775432 122345667789999999999999999 9999999999999
Q ss_pred cCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCC-CCc-
Q 002289 744 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-HGK- 821 (941)
Q Consensus 744 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~-~~~- 821 (941)
+.++.+||+|||+++.+.... ........||..|+|||++.+..++.++|||||||++|||++|..++. ...
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKER------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred CCCCCEEEEeCCCceecCccc------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 999999999999998654321 111233568999999999999999999999999999999999876443 221
Q ss_pred hhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhHhhCCCCCCCCcccccc
Q 002289 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNMMPESDTKTPEFINS 900 (941)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~~~~~~~~~~~dll~~ 900 (941)
............ ....... +++. ...+.+.+.. ......+ ....++..+ .......++|.+
T Consensus 375 ~~~~~~~~~~~~---~~~~~~~---~p~~-~~~~~~~i~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~li~k 436 (501)
T PHA03210 375 KPGKQLLKIIDS---LSVCDEE---FPDP-PCKLFDYIDS---AEIDHAGHSVPPLIRNL--------GLPADFEYPLVK 436 (501)
T ss_pred CHHHHHHHHHHh---cccChhh---cCCc-HHHHHHHhhh---hhcccCccchhhHHHhc--------CCChHHHHHHHH
Confidence 211211111110 0001111 1111 1112222211 1111111 222222111 123455678999
Q ss_pred cCCCCCCCCCCCccCCCCCCCCCCCCC
Q 002289 901 EHTSKEETPPSSSSMLKHPYVSSDVSG 927 (941)
Q Consensus 901 ~L~~dP~~R~sa~e~L~Hpwf~~~~~~ 927 (941)
||++||++||||+|+|.||||+.....
T Consensus 437 mL~~DP~~Rpsa~elL~hp~f~~~~~~ 463 (501)
T PHA03210 437 MLTFDWHLRPGAAELLALPLFSAEEEE 463 (501)
T ss_pred HhccCcccCcCHHHHhhChhhhcCCch
Confidence 999999999999999999999875543
No 212
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.3e-35 Score=315.58 Aligned_cols=258 Identities=28% Similarity=0.487 Sum_probs=206.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CC---cEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
.++|+..+.||+|+||.||+|... ++ ..+|+|.++... ....+.+.+|++++++++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457788899999999999999964 33 379999887543 2334678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||+++++|.+++.... ..+++..++.++.|++.|++|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999996543 45889999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
.... .........+..|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +..
T Consensus 160 ~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-~~~~~---------i~~ 225 (268)
T cd05063 160 DPEG----TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-EVMKA---------IND 225 (268)
T ss_pred cccc----ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-HHHHH---------Hhc
Confidence 2110 111112223457999999998889999999999999999998 99999654321 11111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
....+.+.+++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 122233445667889999999999999999999999998764
No 213
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.5e-35 Score=323.26 Aligned_cols=198 Identities=26% Similarity=0.438 Sum_probs=174.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||.||++.+. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999975 689999999865322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999665 35889999999999999999999999 999999999999999999999999998765321
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.....+++.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 155 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 202 (290)
T cd05580 155 ---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN 202 (290)
T ss_pred ---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 223457889999999988888999999999999999999999996544
No 214
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.9e-35 Score=311.38 Aligned_cols=247 Identities=30% Similarity=0.483 Sum_probs=200.7
Q ss_pred ceeeccCcEEEEEEEeCCCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCHH
Q 002289 615 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 693 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~ 693 (941)
+.||+|+||.||+|...+++.||+|.++..... ....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 368999999999999888899999998764332 2456889999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcccccc
Q 002289 694 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773 (941)
Q Consensus 694 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 773 (941)
+++.... ..+++..++.++.|++.||.|+|+++ ++||||||+||++++++.+||+|||++........ ..
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------~~ 150 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY------SS 150 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc------cc
Confidence 9986543 35789999999999999999999999 99999999999999999999999999875322110 11
Q ss_pred ccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHH
Q 002289 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 852 (941)
Q Consensus 774 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (941)
.....++..|+|||++.+..++.++||||||+++||+++ |..||........ .. .+........+..++
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~--~~--------~~~~~~~~~~~~~~~ 220 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA--RE--------QVEKGYRMSCPQKCP 220 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH--HH--------HHHcCCCCCCCCCCC
Confidence 112234568999999998899999999999999999998 9999965432211 11 111112223345567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 853 EKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 853 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
..+.+++.+|+..+|++||++.++.+.|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 78999999999999999999999998764
No 215
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.2e-34 Score=312.65 Aligned_cols=204 Identities=29% Similarity=0.437 Sum_probs=173.8
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch-----hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
++|++.+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57889999999999999999964 6899999988643221 23468889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
|+||+++++|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999986543 4788999999999999999999999 99999999999999999999999999876532
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.... ........++..|+|||++.+..++.++||||+|+++|||++|+.||....
T Consensus 157 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 211 (263)
T cd06625 157 ICSS----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE 211 (263)
T ss_pred cccc----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc
Confidence 2110 111123457789999999999889999999999999999999999996543
No 216
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.8e-35 Score=327.09 Aligned_cols=267 Identities=23% Similarity=0.319 Sum_probs=207.8
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|+..+.||+|+||+||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999975 5899999998764333 3456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++++|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999997665567899999999999999999999999 9999999999999999999999999987553221
Q ss_pred CCCcc----------------------ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCch
Q 002289 765 IEGIV----------------------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 822 (941)
Q Consensus 765 ~~~~~----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~ 822 (941)
..... .........|+..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10000 00111234678899999999998899999999999999999999999964432
Q ss_pred hHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccC
Q 002289 823 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEH 902 (941)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L 902 (941)
...... +.. ..+ ..|.. ........+++.+|+
T Consensus 238 ~~~~~~----------~~~-----------------------~~~-~~~~~--------------~~~~~~~~~li~~~l 269 (316)
T cd05574 238 DETFSN----------ILK-----------------------KEV-TFPGS--------------PPVSSSARDLIRKLL 269 (316)
T ss_pred HHHHHH----------Hhc-----------------------CCc-cCCCc--------------cccCHHHHHHHHHHc
Confidence 111100 000 000 00000 001223346778888
Q ss_pred CCCCCCCCC----CccCCCCCCCCCCCC
Q 002289 903 TSKEETPPS----SSSMLKHPYVSSDVS 926 (941)
Q Consensus 903 ~~dP~~R~s----a~e~L~Hpwf~~~~~ 926 (941)
..||++|+| ++|+|.||||.+..+
T Consensus 270 ~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 270 VKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred cCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 889999999 999999999987544
No 217
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.9e-35 Score=315.54 Aligned_cols=255 Identities=27% Similarity=0.428 Sum_probs=200.0
Q ss_pred CCccceeeccCcEEEEEEEeCC-Cc--EEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccC------Cc
Q 002289 611 FNSSTQIGQGGYGKVYKGILPD-GT--VVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GE 679 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~ 679 (941)
|.+.+.||+|+||.||+|.+.+ +. .||+|.++... ....+.+.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999999754 33 68999887532 23346788999999999999999999986322 25
Q ss_pred EEEEEecCCCCCHHHHHhhc----CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 002289 680 QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 755 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFG 755 (941)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999987432 2345889999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhc
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 834 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 834 (941)
+++....... ........++..|+|||+..+..++.++|||||||++|||++ |+.||...... +...
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~------ 225 (272)
T cd05075 158 LSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-EIYD------ 225 (272)
T ss_pred cccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH------
Confidence 9986543221 011122345678999999999999999999999999999999 78888654321 1111
Q ss_pred cchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
.+..+.....+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 226 ---YLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ---HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1112222233445667889999999999999999999999988764
No 218
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-35 Score=326.59 Aligned_cols=285 Identities=25% Similarity=0.352 Sum_probs=206.4
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh--hHhHHHHHHHHHhcCCCceeeeeeccccC--CcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~L 682 (941)
.++|++.+.||+|+||.||+|... +|+.||+|+++...... ...+.+|++++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467899999999999999999975 68999999987533222 23567899999999999999999998654 56899
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||.+.....
T Consensus 86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999995 58988886533 46899999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
.. .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ......
T Consensus 161 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~-~~~~~~--------- 223 (309)
T cd07845 161 PA-------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ-LDLIIQ--------- 223 (309)
T ss_pred cc-------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH---------
Confidence 21 11122335778999999876 5578999999999999999999999975443221 111110
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
..+......+..+..+........+... .. .+...++...+...+||.+||.+||++|||++|++.||||
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f 293 (309)
T cd07845 224 -LLGTPNESIWPGFSDLPLVGKFTLPKQP--YN-------NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293 (309)
T ss_pred -hcCCCChhhchhhhcccccccccccCCC--CC-------chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 0011111111111111100000000000 00 1111222335566789999999999999999999999999
Q ss_pred CCC
Q 002289 922 SSD 924 (941)
Q Consensus 922 ~~~ 924 (941)
...
T Consensus 294 ~~~ 296 (309)
T cd07845 294 KEK 296 (309)
T ss_pred ccC
Confidence 753
No 219
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.9e-35 Score=348.65 Aligned_cols=270 Identities=25% Similarity=0.349 Sum_probs=208.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.++||+|+||.||+|.+. +|+.||+|++..... ...+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999975 589999999875322 22457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcC---------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 002289 685 EFMSNGTLRDQLSAKS---------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 755 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFG 755 (941)
||++||+|.+++.... ....++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 123567788899999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCCC-c----------cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhH
Q 002289 756 LSRLAPVPDIEG-I----------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 824 (941)
Q Consensus 756 la~~~~~~~~~~-~----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~ 824 (941)
+++......... . ..........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998652211000 0 00011123469999999999999999999999999999999999999996533211
Q ss_pred HHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhHhhCCC
Q 002289 825 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNMMPE 889 (941)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~~~~~ 889 (941)
.... . ....+.......+.+..+.+++.+|++.+|++|| +++++.+.|+.+....++
T Consensus 239 i~~~-----~---~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~ 296 (932)
T PRK13184 239 ISYR-----D---VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPE 296 (932)
T ss_pred hhhh-----h---hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcc
Confidence 0000 0 0001000011124456788999999999999996 567777888877654443
No 220
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=8.9e-35 Score=320.76 Aligned_cols=260 Identities=24% Similarity=0.393 Sum_probs=208.4
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhc-CCCceeeeeeccccC
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 677 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 677 (941)
...++|.+.+.||+|+||.||+|... .+..||||+++.... ...+.+.+|+++++++ +|+||+++++++...
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 34567899999999999999999741 345799998875432 2345788999999999 799999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
+..++||||+++|+|.++++......+++.+++.++.|++.||+|||+++ |+|+||||+||+++.++.++++|||++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999997655445899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
+....... ........++..|+|||.+.+..++.++||||+||++|||++ |+.||...........
T Consensus 189 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~-------- 255 (302)
T cd05055 189 RDIMNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYK-------- 255 (302)
T ss_pred ccccCCCc-----eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHH--------
Confidence 76533210 011122345678999999999999999999999999999998 9999865432111111
Q ss_pred hhhhcC-CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 837 FSVIDG-NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 837 ~~~~~~-~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
.+.. .....+...+..+.+++.+|+..+|++||++.++++.|++.
T Consensus 256 --~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 256 --LIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --HHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111 11122334456889999999999999999999999988763
No 221
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-37 Score=310.63 Aligned_cols=271 Identities=23% Similarity=0.325 Sum_probs=218.7
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHh---HHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~---~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
.++|..+++||+|.||.|-+++-+ +++.+|+|++++.-....++ -..|-++|+..+||.+..+.-.|+..++.|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 456778899999999999999965 79999999998765444333 35688899999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||..||.|.-++.+. ..+++...+.+-..|+.||.|||+++ ||.||||.+|.|+|.+|++||+|||+++.-
T Consensus 247 MeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~--- 318 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEE--- 318 (516)
T ss_pred EEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhc---
Confidence 9999999999888653 45889999999999999999999999 999999999999999999999999999743
Q ss_pred CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
+.........+||+.|+|||++....|+.++|.|.+||++|||++|+.||...+.
T Consensus 319 ----I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------------------- 373 (516)
T KOG0690|consen 319 ----IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------------------- 373 (516)
T ss_pred ----ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---------------------
Confidence 2224456778999999999999999999999999999999999999999975432
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC-----CCccCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKH 918 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~H 918 (941)
+.+.+++..|--+-| ....+++..|+..+|..||.+|+ .|+|+.+|
T Consensus 374 ---------~kLFeLIl~ed~kFP--------------------r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 374 ---------EKLFELILMEDLKFP--------------------RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ---------hHHHHHHHhhhccCC--------------------ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 223344433321111 12334455677777888888886 46888999
Q ss_pred CCCCCCCCCCccccccccccCC
Q 002289 919 PYVSSDVSGSNLVSGVIPTITP 940 (941)
Q Consensus 919 pwf~~~~~~~~~~~~~~~~~~~ 940 (941)
+||.+..+.-..--.+.||++|
T Consensus 425 ~FF~~v~W~~~~~Kki~PPfKP 446 (516)
T KOG0690|consen 425 RFFASVDWEATYRKKIEPPFKP 446 (516)
T ss_pred hhhccCCHHHHHHhccCCCCCC
Confidence 9998877765555556666665
No 222
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.2e-35 Score=314.51 Aligned_cols=257 Identities=23% Similarity=0.368 Sum_probs=208.7
Q ss_pred cCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||.||+|.. .+++.||||.+.... ....+++.+|+++++.++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999996 478999999876432 223457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 685 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 685 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||+++++|.+++... ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998642 2346899999999999999999999999 99999999999999999999999999876532
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
.. .......++..|+|||++.+..++.++||||||+++|||++|..||............ .+...
T Consensus 159 ~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~ 223 (267)
T cd08229 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--------KIEQC 223 (267)
T ss_pred CC-------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--------hhhcC
Confidence 21 1112345788999999999888999999999999999999999999644321111110 11111
Q ss_pred CCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 843 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 843 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
..+. .+...+..+.+++.+||..+|++||++.++++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1222 2345677899999999999999999999999988765
No 223
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.5e-35 Score=315.39 Aligned_cols=258 Identities=28% Similarity=0.463 Sum_probs=206.3
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-C---CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
.++|++.+.||+|+||.||+|.+. + +..+|+|.++.... ...+.+.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 357888999999999999999863 2 34799998875432 234678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999997653 35889999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
.... ........++..|+|||++.+..++.++|||||||++||+++ |+.||....... ... .+.+
T Consensus 159 ~~~~----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-~~~---------~~~~ 224 (267)
T cd05066 159 DPEA----AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-VIK---------AIEE 224 (267)
T ss_pred ccce----eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-HHH---------HHhC
Confidence 2110 111112223568999999999899999999999999999887 999996543211 111 1111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
....+.+..++..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 225 GYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111223344567889999999999999999999999998764
No 224
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.9e-35 Score=328.74 Aligned_cols=262 Identities=26% Similarity=0.433 Sum_probs=204.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEe------CCCcEEEEEEeccCCch-hhHhHHHHHHHHHhc-CCCceeeeeeccccC-
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE- 677 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~- 677 (941)
..++|++.+.||+|+||.||+|.+ .+++.||||+++..... ....+.+|++++.++ +|+||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 456899999999999999999974 34789999999754322 345688999999999 689999999988554
Q ss_pred CcEEEEEecCCCCCHHHHHhhcC---------------------------------------------------------
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKS--------------------------------------------------------- 700 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~--------------------------------------------------------- 700 (941)
...++||||+++|+|.++++...
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56789999999999999986431
Q ss_pred --------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 701 --------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 701 --------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
...+++..+..++.|+++||+|||+++ |+||||||+||++++++++||+|||++........ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----~~ 236 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YV 236 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcc-----hh
Confidence 123678888999999999999999999 99999999999999999999999999876432110 01
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHH
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 851 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (941)
......++..|+|||++.+..++.++||||||+++|||++ |..||......... ... +..+.....+...
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~--------~~~~~~~~~~~~~ 307 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-CRR--------LKEGTRMRAPDYT 307 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH-HHH--------HhccCCCCCCCCC
Confidence 1112335678999999999999999999999999999997 99998653321111 111 1111222233334
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 852 VEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 852 ~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
...+.+++..||+.+|++||++.+++++|+.+.+
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 5678999999999999999999999999998754
No 225
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-38 Score=306.90 Aligned_cols=294 Identities=23% Similarity=0.322 Sum_probs=213.2
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeecccc--------C
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------E 677 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------~ 677 (941)
..|+...+||+|.||.||+|+.+ +|+.||+|+.--+. ........+|+++|..++|+|++.++..|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34566788999999999999965 57889998653211 1223467899999999999999999998843 2
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
..+++||++|+. +|.-++.. ....++..++.+++.++..||.|+|... |+|||+|+.|+|++.++.+||+|||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccc
Confidence 358999999965 88888854 3356889999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
+.+...+... ....+..+-|.+|++||.+.| ..|+++.|||+-||++.||+||.+.+....+.. ++.
T Consensus 172 r~fs~~~n~~---kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqq-ql~-------- 239 (376)
T KOG0669|consen 172 RAFSTSKNVV---KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQ-QLH-------- 239 (376)
T ss_pred cceecccccC---CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHH-HHH--------
Confidence 8776544321 223455667999999999987 569999999999999999999977776544422 211
Q ss_pred hhhhcCCCCCCChHHHHHHHHHHH-HhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccC
Q 002289 837 FSVIDGNMGSYPSECVEKFIKLAL-KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 915 (941)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~l~~l~~-~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 915 (941)
.+..-.+.+..+.++.+.++-. .-++..|--.-+.+ .++...+.+ ..++.+.|++.+||++||.+|+.|+++
T Consensus 240 --~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~r----kv~n~~kp~-~kd~~a~dLle~ll~~DP~kR~~ad~a 312 (376)
T KOG0669|consen 240 --LISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKR----KVKNRLKPY-VKDDEALDLLEKLLKLDPTKRIDADQA 312 (376)
T ss_pred --HHHHHhccCCcccCCCcccchHHHhccCCCCCcchhh----hhhhhcccc-cCChhHHHHHHHHhccCcccCcchHhh
Confidence 1222223333333322221110 01111221111222 222322222 346788999999999999999999999
Q ss_pred CCCCCCCCCCC
Q 002289 916 LKHPYVSSDVS 926 (941)
Q Consensus 916 L~Hpwf~~~~~ 926 (941)
|.|.||..+-.
T Consensus 313 lnh~~F~kdp~ 323 (376)
T KOG0669|consen 313 LNHDFFWKDPM 323 (376)
T ss_pred hchhhhhcCCc
Confidence 99999966544
No 226
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-36 Score=329.52 Aligned_cols=253 Identities=27% Similarity=0.431 Sum_probs=211.8
Q ss_pred CCCccceeeccCcEEEEEEEeC--CCc--EEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
.....++||+|.||.|++|.|. +|+ .||||.++..... ...+|++|+.+|-+++|+|++++||...+ ....+||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 3445678999999999999986 344 5899999876554 45789999999999999999999999987 6788999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
|.++.|||.+.|++.....|-......++.|||.||.||.+++ +|||||..+|+|+-..-.|||+|||+.+-+...+
T Consensus 190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999999998866678899999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
... .......-...|.|||.+....++.++|||+|||++|||+| |..||....... .+..+-+++
T Consensus 267 d~Y----vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------IL~~iD~~e 332 (1039)
T KOG0199|consen 267 DMY----VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------ILKNIDAGE 332 (1039)
T ss_pred cce----EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------HHHhccccc
Confidence 211 11112234568999999999999999999999999999999 888997544311 111222455
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
+..-|..|+++++++++.||...|++||++.++.+.+
T Consensus 333 rLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 333 RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 6667899999999999999999999999999997444
No 227
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-34 Score=318.65 Aligned_cols=200 Identities=25% Similarity=0.422 Sum_probs=175.4
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.+|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888999999999999999964 68999999987655555667899999999999999999999999899999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++++|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 999999998543 4788899999999999999999999 9999999999999999999999999987543211
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......+++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 171 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 171 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred ----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223458889999999998889999999999999999999999996544
No 228
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-36 Score=319.40 Aligned_cols=256 Identities=21% Similarity=0.339 Sum_probs=210.3
Q ss_pred cCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchh--hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
+-|...+.||+|.|..|-+|++ -+|..||||++.+..... ...+.+|+++|+.++|||||++|.+......+|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 4577778999999999999985 389999999998755443 4578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE-cCCCcEEEeeeccccccCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-DHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl-~~~~~~kl~DFGla~~~~~~~ 764 (941)
.-++|+|+|++-++. ..+.+....+++.||+.|+.|+|+.+ +|||||||+||.+ ..-|-+||+|||.+..+.
T Consensus 98 LGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~--- 170 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ--- 170 (864)
T ss_pred ecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCC---
Confidence 999999999996654 35899999999999999999999999 9999999999877 567899999999987553
Q ss_pred CCCccccccccccccCCCcccccccccCCCCc-hhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
+.......+|+..|-|||.+.|..|+. ++||||+|||||-+++|+.||....+..
T Consensus 171 -----PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE------------------- 226 (864)
T KOG4717|consen 171 -----PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE------------------- 226 (864)
T ss_pred -----CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-------------------
Confidence 345566778999999999999999875 6899999999999999999997554321
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
-...|+.|----| . ....+..|||.+||+-||.+|.|.+|+..|+|++.
T Consensus 227 -----------TLTmImDCKYtvP-------s-------------hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 227 -----------TLTMIMDCKYTVP-------S-------------HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred -----------hhhhhhcccccCc-------h-------------hhhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 1122333422111 1 11223457889999999999999999999999976
Q ss_pred CCC
Q 002289 924 DVS 926 (941)
Q Consensus 924 ~~~ 926 (941)
...
T Consensus 276 ~D~ 278 (864)
T KOG4717|consen 276 GDR 278 (864)
T ss_pred CCC
Confidence 444
No 229
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.9e-35 Score=322.36 Aligned_cols=257 Identities=29% Similarity=0.476 Sum_probs=203.6
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCc--EEEEEEeccCC-chhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~L 682 (941)
.++|++.+.||+|+||.||+|.++ ++. .+|+|.++... ....+.+.+|++++.++ +|+||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 356788899999999999999964 454 46777776432 23345788999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc
Q 002289 683 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 748 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~ 748 (941)
||||+++|+|.++++... ...+++..++.++.|++.||+|||+++ |+||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence 999999999999997542 135789999999999999999999999 999999999999999999
Q ss_pred EEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002289 749 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 827 (941)
Q Consensus 749 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~ 827 (941)
+||+|||+++..... .......++..|+|||++.+..++.++|||||||++|||+| |..||...... +..
T Consensus 163 ~kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~ 233 (303)
T cd05088 163 AKIADFGLSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELY 233 (303)
T ss_pred EEeCccccCcccchh--------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHH
Confidence 999999998632110 01111224567999999988889999999999999999998 99999644321 111
Q ss_pred HHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 828 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
.. .........+...+..+.+++.+|++.+|++||++.++++.++.+..
T Consensus 234 ~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 234 EK---------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HH---------HhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 11111122333455678999999999999999999999999987654
No 230
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=6.3e-35 Score=319.71 Aligned_cols=257 Identities=32% Similarity=0.504 Sum_probs=206.8
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCc
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 679 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 679 (941)
..++|++.+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3567899999999999999999853 467899999875433 334678999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC--------------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCC
Q 002289 680 QMLVYEFMSNGTLRDQLSAKS--------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKAS 739 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~ 739 (941)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHh
Confidence 999999999999999996432 124788889999999999999999998 999999999
Q ss_pred cEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCC
Q 002289 740 NILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 818 (941)
Q Consensus 740 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~ 818 (941)
||++++++.++|+|||.++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYY-----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred heEecCCCceEECccccceecccCccc-----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999998754322110 11112234567999999998999999999999999999998 888886
Q ss_pred CCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
.... .+... .+.++.....+..++.++.+++.+|++.+|++||++.|+++.|+
T Consensus 235 ~~~~-~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 235 GMAH-EEVIY---------YVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCH-HHHHH---------HHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 4432 11111 11222222334556678999999999999999999999998876
No 231
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=326.21 Aligned_cols=243 Identities=30% Similarity=0.486 Sum_probs=204.5
Q ss_pred CCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchh---hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 611 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
|.-++.||.|+||.||-|++ .+..+||||++.....+. =.++..|++.|++++|||++.+.|+|..+...||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 44467899999999999996 478999999987544333 24689999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
| -||-.|++.-. +.++.+..+..|+.+.++||+|||+.+ .||||||+.|||+++.|.|||+|||.|.....
T Consensus 108 C-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P---- 178 (948)
T KOG0577|consen 108 C-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP---- 178 (948)
T ss_pred H-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc----
Confidence 9 67999988643 356889999999999999999999999 99999999999999999999999999986532
Q ss_pred CccccccccccccCCCccccccccc---CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
....+||+.|||||++.. +.|+-++||||+|++..|+.-+++|++........ +.+-...
T Consensus 179 -------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL----------YHIAQNe 241 (948)
T KOG0577|consen 179 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----------YHIAQNE 241 (948)
T ss_pred -------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH----------HHHHhcC
Confidence 345679999999999864 68999999999999999999999998865543322 2222222
Q ss_pred CCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 844 MGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 844 ~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
-+. ...+++..+..++..|+++-|.+|||..+++++
T Consensus 242 sPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 242 SPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 233 346788999999999999999999999988764
No 232
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.6e-35 Score=323.32 Aligned_cols=258 Identities=23% Similarity=0.365 Sum_probs=201.8
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 334567999999999999964 6899999998765555566789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
++|.+++... .+++..++.++.||+.||+|||+++ |+||||||+||++++++.++|+|||++.......
T Consensus 104 ~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----- 172 (292)
T cd06658 104 GALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV----- 172 (292)
T ss_pred CcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc-----
Confidence 9999988542 4788999999999999999999998 9999999999999999999999999987543211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
.......|+..|+|||...+..++.++||||||+++|||++|+.||........ .
T Consensus 173 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~---------------------- 227 (292)
T cd06658 173 --PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-M---------------------- 227 (292)
T ss_pred --ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H----------------------
Confidence 112234588899999999988899999999999999999999999964332110 0
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCCCCC
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGS 928 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~~~ 928 (941)
..+............ .......+++.+|+..||++|||++|+++||||......+
T Consensus 228 -------~~~~~~~~~~~~~~~-----------------~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 228 -------RRIRDNLPPRVKDSH-----------------KVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred -------HHHHhcCCCcccccc-----------------ccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 001111100000000 0111223577788899999999999999999998755544
No 233
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.5e-35 Score=316.10 Aligned_cols=203 Identities=31% Similarity=0.465 Sum_probs=172.7
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccC------C
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE------G 678 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~------~ 678 (941)
+++.|++.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++++ +|+||+++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 5678889999999999999999965 68899999987543 3345788999999998 799999999998542 4
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
..++||||+++++|.+++.......+++..+..++.|++.||+|||+++ |+||||||+||++++++.++|+|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCce
Confidence 6899999999999999997655567899999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
...... .......|+..|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 160 ~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~ 219 (272)
T cd06637 160 QLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 219 (272)
T ss_pred eccccc-------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 543211 1223456889999999986 345788999999999999999999999643
No 234
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-34 Score=322.42 Aligned_cols=265 Identities=25% Similarity=0.479 Sum_probs=210.3
Q ss_pred HHHHhcCCCccceeeccCcEEEEEEEeC--------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhc-CCCceeeeeec
Q 002289 604 MALATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGY 673 (941)
Q Consensus 604 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~ 673 (941)
++....+|++.+.||+|+||.||+|... .+..||+|.++.... ...+.+.+|+++++++ +|+||++++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 3445567899999999999999999742 123689998875332 2346789999999999 79999999999
Q ss_pred cccCCcEEEEEecCCCCCHHHHHhhcC--------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCC
Q 002289 674 CDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKAS 739 (941)
Q Consensus 674 ~~~~~~~~LV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~ 739 (941)
|...+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccc
Confidence 999999999999999999999997532 234788999999999999999999999 999999999
Q ss_pred cEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCC
Q 002289 740 NILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 818 (941)
Q Consensus 740 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~ 818 (941)
||+++.++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc-----cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999976532211 011122234567999999999999999999999999999998 888886
Q ss_pred CCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
.... .+.... +..+.....+..++..+.+++.+|++.+|.+||++.++++.|+.+...
T Consensus 239 ~~~~-~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 239 GIPV-EELFKL---------LKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred CCCH-HHHHHH---------HHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 5432 221111 111122234455667899999999999999999999999999988653
No 235
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=303.02 Aligned_cols=260 Identities=21% Similarity=0.301 Sum_probs=205.4
Q ss_pred hcCCCcc-ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHh-cCCCceeeeeecccc----CCcE
Q 002289 608 TNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE----EGEQ 680 (941)
Q Consensus 608 ~~~y~~~-~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~----~~~~ 680 (941)
+++|++. ++||-|-.|.|-.+..+ +|+.+|+|++.+. ....+|++.-=. -.|||||.++++|.. .+.+
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 4555553 57899999999999865 7899999998752 345678876433 379999999999843 4577
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeeccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLS 757 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~---~~~~kl~DFGla 757 (941)
.+|||.|+||.|...++.++...+++.++-.|+.||+.|+.|||+.+ |.||||||+|+|... +..+||+|||.|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccc
Confidence 89999999999999999999999999999999999999999999999 999999999999964 568999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
+.... .......+-|+.|.|||++...+|+...|+||+||++|-|++|..||....... . ...+.
T Consensus 212 K~t~~--------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a------i-spgMk 276 (400)
T KOG0604|consen 212 KETQE--------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------I-SPGMK 276 (400)
T ss_pred cccCC--------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc------C-ChhHH
Confidence 86432 123345668999999999999999999999999999999999999997543210 0 01111
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCC
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 917 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 917 (941)
..+...-..||.+.+..+.+ .++|+|+.+|+.+|++|+|.+|.+.
T Consensus 277 ~rI~~gqy~FP~pEWs~VSe-----------------------------------~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 277 RRIRTGQYEFPEPEWSCVSE-----------------------------------AAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHhhccCccCCChhHhHHHH-----------------------------------HHHHHHHHHhcCCchhheeHHHhhc
Confidence 22222223455544443322 2347899999999999999999999
Q ss_pred CCCCCCCC
Q 002289 918 HPYVSSDV 925 (941)
Q Consensus 918 Hpwf~~~~ 925 (941)
|||+.+..
T Consensus 322 hpwi~~~~ 329 (400)
T KOG0604|consen 322 HPWINQYE 329 (400)
T ss_pred Cchhcccc
Confidence 99998843
No 236
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=7.5e-35 Score=320.18 Aligned_cols=281 Identities=24% Similarity=0.367 Sum_probs=204.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcC-CCceeeeeeccccCCc-----
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGE----- 679 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~----- 679 (941)
++|++.+.||+|+||.||+|.+. +++.||+|........ ....+.+|+.+++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 47889999999999999999975 6899999987653222 2356888999999995 6999999999876655
Q ss_pred EEEEEecCCCCCHHHHHhhcC---CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEEEeeec
Q 002289 680 QMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFG 755 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-~~~~kl~DFG 755 (941)
.++||||+++ +|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8988886532 246899999999999999999999999 999999999999998 8999999999
Q ss_pred cccccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhc
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 834 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~ 834 (941)
+++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|+.||............ ..
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~-~~-- 226 (295)
T cd07837 157 LGRAFSIPV-------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHI-FK-- 226 (295)
T ss_pred cceecCCCc-------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HH--
Confidence 987553221 11122346788999998865 45789999999999999999999999765443322211 10
Q ss_pred cchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcc
Q 002289 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 914 (941)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 914 (941)
.+ ...+.........+.... ..|..+|. ......+..+....+||.+||..||++||+++|
T Consensus 227 ----~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e 287 (295)
T cd07837 227 ----LL----GTPTEQVWPGVSKLRDWH--EFPQWKPQ---------DLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA 287 (295)
T ss_pred ----Hh----CCCChhhCcchhhccchh--hcCcccch---------hHHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence 00 000111111111100000 01111111 011222344556678999999999999999999
Q ss_pred CCCCCCCC
Q 002289 915 MLKHPYVS 922 (941)
Q Consensus 915 ~L~Hpwf~ 922 (941)
++.||||+
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999995
No 237
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.5e-34 Score=313.52 Aligned_cols=257 Identities=27% Similarity=0.430 Sum_probs=207.6
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC----CcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
.++|.+.+.||+|+||.||+|.+.+ ...||||...... ....+.+.+|+.++++++|+||+++++++.+ +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 4568888999999999999998643 3478999887644 3345678999999999999999999999875 45789
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999999999996543 35899999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
... .......++..|+|||.+....++.++||||||+++||+++ |+.||........... +..
T Consensus 160 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~----------~~~ 223 (270)
T cd05056 160 ESY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR----------IEN 223 (270)
T ss_pred ccc------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----------HHc
Confidence 211 11112234568999999988889999999999999999996 9999976543211111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
+.....+..++..+.+++.+|+..+|.+||++.+++..|+++.+
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 224 GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 22223455667789999999999999999999999999998754
No 238
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.3e-34 Score=318.30 Aligned_cols=261 Identities=26% Similarity=0.419 Sum_probs=202.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC---------------CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeee
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD---------------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLV 671 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~ 671 (941)
.++|++.+.||+|+||.||++...+ ...||+|.++.... .....+.+|++++++++|+||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4688999999999999999987532 23589999875432 2345789999999999999999999
Q ss_pred eccccCCcEEEEEecCCCCCHHHHHhhcC----------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcE
Q 002289 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 741 (941)
Q Consensus 672 ~~~~~~~~~~LV~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NI 741 (941)
+++...+..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence 99999999999999999999999986432 124688899999999999999999999 99999999999
Q ss_pred EEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh--CCCCCCC
Q 002289 742 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPISH 819 (941)
Q Consensus 742 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt--G~~Pf~~ 819 (941)
++++++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred EEcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999876532211 111222345678999999999899999999999999999998 5667764
Q ss_pred Cch--hHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 820 GKN--IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 820 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
... ........+.. .........+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 236 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 236 LSDEQVIENTGEFFRN-----QGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cChHHHHHHHHHhhhh-----ccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 322 11111110100 0000111223345578999999999999999999999998875
No 239
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.9e-34 Score=310.13 Aligned_cols=201 Identities=26% Similarity=0.406 Sum_probs=172.6
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeecccc-CCcEEEEEe
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYE 685 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~LV~e 685 (941)
+|++.+.||+|++|.||++..+ +++.||+|.+..... ...+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4888999999999999999965 578999999865332 234568899999999999999999998764 446789999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|.+++.......+++.+++.++.|++.|++|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 999999999997655566899999999999999999999999 9999999999999999999999999987653221
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......+++.|+|||++.+..++.++||||+|++++||++|+.||...
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 205 (257)
T cd08223 157 ------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK 205 (257)
T ss_pred ------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 1123345788999999999999999999999999999999999998643
No 240
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.2e-34 Score=311.53 Aligned_cols=201 Identities=26% Similarity=0.419 Sum_probs=175.1
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|+||.||++... +|+.||+|.+.... ....+++.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5888999999999999999964 68999999986432 23345789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.......+++..++.++.|++.||+|||+++ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 99999999997655556889999999999999999999998 9999999999999999999999999997653221
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......|+..|+|||+..+..++.++|||||||+++||++|+.||...
T Consensus 156 -----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08218 156 -----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG 204 (256)
T ss_pred -----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC
Confidence 1122345788999999999988999999999999999999999999654
No 241
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.7e-34 Score=314.70 Aligned_cols=258 Identities=27% Similarity=0.437 Sum_probs=204.7
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCc----EEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
.++|++.++||+|+||+||+|.+. +++ .||+|+++.... ...+.+.+|+.+++.++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 457888999999999999999853 444 489999875433 335678899999999999999999999875 4578
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+++||+++|+|.++++... ..+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999996543 35889999999999999999999999 9999999999999999999999999998664
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
.... ........++..|+|||...+..++.++|||||||++|||++ |..||....... ..... .
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~--------~ 225 (279)
T cd05109 161 IDET-----EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDLL--------E 225 (279)
T ss_pred cccc-----eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH--------H
Confidence 3211 011112234678999999999999999999999999999998 889986543211 11111 1
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
.......+..++..+.+++.+||+.+|++||++.++++.++.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 226 KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111223344566788999999999999999999999998877643
No 242
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=6.3e-35 Score=316.02 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=195.0
Q ss_pred HHHHHhcCCCcccee--eccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccCC
Q 002289 603 EMALATNNFNSSTQI--GQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 678 (941)
Q Consensus 603 ~~~~~~~~y~~~~~l--G~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 678 (941)
+.....++|++.+.+ |+|+||.||++..+ ++..+|+|.+....... .|+.....+ +|+||+++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence 344445677777776 99999999999964 68899999987532221 122222222 7999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-cEEEeeeccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLS 757 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-~~kl~DFGla 757 (941)
..++||||+++++|.+++.... .+++..++.++.|+++||.|||+.+ ++||||||+||+++.++ .++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999997653 6899999999999999999999999 99999999999999998 9999999998
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
+..... ....++..|+|||++.+..++.++||||+|+++|||++|+.||.......-
T Consensus 158 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~------------ 214 (267)
T PHA03390 158 KIIGTP-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL------------ 214 (267)
T ss_pred eecCCC-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh------------
Confidence 754321 123578899999999998999999999999999999999999963321000
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCC-ccCC
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-SSML 916 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa-~e~L 916 (941)
....+. ...... + ...+..++.+.+||.+||+.+|++|+++ +|+|
T Consensus 215 -------------~~~~~~----~~~~~~----~-------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 215 -------------DLESLL----KRQQKK----L-------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred -------------hHHHHH----Hhhccc----C-------------CcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 000000 000000 0 0011233445689999999999999975 9999
Q ss_pred CCCCCCC
Q 002289 917 KHPYVSS 923 (941)
Q Consensus 917 ~Hpwf~~ 923 (941)
+||||.+
T Consensus 261 ~h~~~~~ 267 (267)
T PHA03390 261 KHPFLKI 267 (267)
T ss_pred cCCcccC
Confidence 9999974
No 243
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.9e-34 Score=310.14 Aligned_cols=250 Identities=27% Similarity=0.420 Sum_probs=202.9
Q ss_pred ceeeccCcEEEEEEEeCC--C--cEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILPD--G--TVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++++++++|+||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999643 3 3699999987665 456789999999999999999999999988 889999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
++|.+++.......+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 153 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--- 153 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc---
Confidence 99999997654356899999999999999999999998 999999999999999999999999999876432211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCC
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (941)
........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ....... .......+
T Consensus 154 -~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~--------~~~~~~~~ 223 (257)
T cd05040 154 -YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-ILKKIDK--------EGERLERP 223 (257)
T ss_pred -eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHh--------cCCcCCCC
Confidence 111123456789999999999899999999999999999999 999996543321 1111110 11112234
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 849 SECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 849 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
...+..+.+++.+|++.+|++||++.++++.|.
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 455678999999999999999999999998764
No 244
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.3e-34 Score=313.80 Aligned_cols=259 Identities=28% Similarity=0.466 Sum_probs=204.9
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CC---cEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
..|++.+.||+|+||.||+|... ++ ..||||.++... ....++|..|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34778899999999999999964 33 369999987542 23346799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999986543 35889999999999999999999999 999999999999999999999999998765432
Q ss_pred CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
..... .........+..|+|||++.+..++.++|||||||++||+++ |..||...... +.... . ...
T Consensus 160 ~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-~~~~~-i--------~~~ 227 (269)
T cd05065 160 TSDPT--YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVINA-I--------EQD 227 (269)
T ss_pred ccccc--cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-HHHHH-H--------HcC
Confidence 21100 000011112457999999999999999999999999999887 99999754321 11111 0 111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
...+.+.+++..+.+++..||+.+|.+||++.+++..|+++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11223455677889999999999999999999999988764
No 245
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.3e-34 Score=316.33 Aligned_cols=278 Identities=26% Similarity=0.402 Sum_probs=206.0
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
|++.+.||.|++|.||+|... +|+.||+|++...... ..+.+.+|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 667889999999999999965 7999999998754322 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
+++|.+++.......+++..++.++.|+++||+|||+++ ++||||+|+||+++.++.++|+|||+++......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--- 153 (283)
T cd07835 81 -DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--- 153 (283)
T ss_pred -CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc---
Confidence 479999997665556899999999999999999999998 9999999999999999999999999997543221
Q ss_pred ccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||............ . .. ...
T Consensus 154 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~-~---------~~-~~~ 218 (283)
T cd07835 154 ----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRI-F---------RT-LGT 218 (283)
T ss_pred ----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-H---------HH-hCC
Confidence 111223467899999988764 5788999999999999999999999765443221111 0 00 011
Q ss_pred CChHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 847 YPSECVEKFIKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~-RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
...........+.... ..-+.. .+... ...+.......+++.+|+..||++|||++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 219 PDEDVWPGVTSLPDYK-PTFPKWARQDLS----------KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChHHhhhhhhchhhh-hhcccccccchh----------hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 1111111111110000 000100 11111 1122333456689999999999999999999999998
No 246
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.9e-34 Score=310.29 Aligned_cols=249 Identities=29% Similarity=0.482 Sum_probs=200.0
Q ss_pred ceeeccCcEEEEEEEeC--C--CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP--D--GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
++||+|+||.||+|++. + +..||+|.+..... ...+++.+|+++++.+.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999853 2 36899999886544 24567899999999999999999999876 4568999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|+|.+++.... .+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcc---
Confidence 99999997654 5889999999999999999999998 999999999999999999999999999865332110
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCC
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (941)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||...... +.... . ........+
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~-~--------~~~~~~~~~ 220 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAM-L--------ESGERLPRP 220 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHH-H--------HcCCcCCCC
Confidence 111112224568999999999999999999999999999998 99999754431 11111 1 111122345
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 849 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 849 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
..++..+.+++.+|+..+|++||++.++.+.|+++
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 55667899999999999999999999999999875
No 247
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.6e-34 Score=310.02 Aligned_cols=254 Identities=31% Similarity=0.498 Sum_probs=196.6
Q ss_pred ceeeccCcEEEEEEEeC----CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccc-cCCcEEEEEecCC
Q 002289 615 TQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQMLVYEFMS 688 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~LV~e~~~ 688 (941)
+.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 24679999886432 333567889999999999999999999775 4556899999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+|+|.+++.... ....+..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~- 155 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS- 155 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee-
Confidence 999999997543 23677788899999999999999998 9999999999999999999999999997543221100
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCC-CCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~-~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
........++..|+|||++.+..++.++|||||||++|||++|. .||.... ....... +..+.....
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~ 223 (262)
T cd05058 156 --VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-SFDITVY---------LLQGRRLLQ 223 (262)
T ss_pred --ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH---------HhcCCCCCC
Confidence 11112334567899999999889999999999999999999954 4554332 2221111 112222233
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
+...+..+.+++..||+.+|++||++.++++.++++..
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 44456788999999999999999999999999988753
No 248
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.6e-34 Score=310.72 Aligned_cols=206 Identities=28% Similarity=0.506 Sum_probs=174.3
Q ss_pred CCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCc------hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
+|++.+.||+|+||+||+|...+++.+|+|.+..... ...+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999988899999998864321 1124688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||+++++|.+++.+.. .+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999996543 4788999999999999999999998 999999999999999999999999998765321
Q ss_pred CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
..... .........|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 212 (265)
T cd06631 156 GLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD 212 (265)
T ss_pred ccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC
Confidence 11100 0112233468899999999999889999999999999999999999996543
No 249
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.7e-35 Score=318.86 Aligned_cols=193 Identities=26% Similarity=0.417 Sum_probs=167.6
Q ss_pred eeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
||+|+||+||+|... +|+.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 689999998865322 2244667899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.+++.......+++..++.++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.+...... .
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--------~ 149 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--------K 149 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC--------C
Confidence 99997766557899999999999999999999999 999999999999999999999999998754321 1
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
......++..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 197 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence 112345778999999998888999999999999999999999999643
No 250
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.4e-34 Score=311.27 Aligned_cols=206 Identities=27% Similarity=0.485 Sum_probs=173.2
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---------hHhHHHHHHHHHhcCCCceeeeeeccccCCc
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---------EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 679 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 679 (941)
+|.+...||+|+||.||+|... +++.||+|.+....... .+.+.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4777889999999999999864 68899999886532211 2467889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999654 35788899999999999999999998 99999999999999999999999999986
Q ss_pred cCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
......... .........|+..|+|||.+.+..++.++||||+||++|||++|+.||....
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 216 (267)
T cd06628 156 LEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT 216 (267)
T ss_pred cccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc
Confidence 643211100 0111223457889999999999889999999999999999999999997543
No 251
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3e-34 Score=310.83 Aligned_cols=205 Identities=27% Similarity=0.400 Sum_probs=173.4
Q ss_pred HHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 604 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 604 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
++.+++++.....||+|+||.||+|.+. +++.||+|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3445666777789999999999999964 678999999887665666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCc--cHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEEEeeeccccc
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPL--GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRL 759 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-~~~~kl~DFGla~~ 759 (941)
|+||+++++|.+++.... ..+ ++..+..++.|++.||+|||+++ |+||||||+||+++. ++.++|+|||.+..
T Consensus 83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 999999999999997542 224 78888999999999999999998 999999999999976 67999999999875
Q ss_pred cCCCCCCCccccccccccccCCCcccccccccCC--CCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
..... .......|+..|+|||++.+.. ++.++||||||+++|||++|+.||..
T Consensus 159 ~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 159 LAGIN-------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred cccCC-------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 53211 1112235788999999987643 78899999999999999999999864
No 252
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.3e-34 Score=316.52 Aligned_cols=262 Identities=29% Similarity=0.445 Sum_probs=205.4
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC-----------------CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceee
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVS 669 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~ 669 (941)
.++|++.+.||+|+||.||+|...+ +..||+|.+..... ...+.+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4678999999999999999988542 24689999875433 34567899999999999999999
Q ss_pred eeeccccCCcEEEEEecCCCCCHHHHHhhcC---------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCc
Q 002289 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS---------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 740 (941)
Q Consensus 670 l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~N 740 (941)
+++++..++..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999999899999999999999999997543 125899999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh--CCCCCC
Q 002289 741 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPIS 818 (941)
Q Consensus 741 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt--G~~Pf~ 818 (941)
|+++.++.++|+|||+++.....+. ........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-----YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-----eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 9999999999999999876533221 111223446778999999998889999999999999999998 677876
Q ss_pred CCchhHHHHHHHHhhccchhhhc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 819 HGKNIVREVNIAYQSSMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
....... ...... ...... ......+..++.++.+++..|++.+|.+||++.++++.|+
T Consensus 236 ~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 236 HLTDQQV-IENAGH---FFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CcChHHH-HHHHHh---ccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 4332111 111100 000000 0011223345578999999999999999999999998875
No 253
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.4e-34 Score=316.24 Aligned_cols=267 Identities=25% Similarity=0.422 Sum_probs=205.1
Q ss_pred cCCCccceeeccCcEEEEEEEe-----CCCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccC--CcE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 680 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 680 (941)
..|++.+.||+|+||.||++.. .++..||+|.++... ....+.+.+|++++++++|+||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467889999999999999974 357899999987543 23346789999999999999999999998765 568
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||+++++|.+++.+.. ..+++..++.++.|++.||+|||+++ ++||||||+||+++.++.++|+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999996543 35899999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhH-HHHH---HHHh-hcc
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REVN---IAYQ-SSM 835 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~-~~~~---~~~~-~~~ 835 (941)
...... ........++..|+|||++.+..++.++|||||||++|||++++.|........ +... .... ...
T Consensus 160 ~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 160 ETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 432210 111223446778999999998889999999999999999999877653221100 0000 0000 000
Q ss_pred chhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
......+...+.+..++..+.+++.+|++.+|++||++.++++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 001111222233455678899999999999999999999999998865
No 254
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2e-34 Score=309.86 Aligned_cols=249 Identities=26% Similarity=0.399 Sum_probs=197.5
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|+..+.||+|+||.||.++.. +++.+++|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5888999999999999999854 68999999876532 33356788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.......+++..+..++.|+++||+|||+.+ ++||||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99999999997765566899999999999999999999998 99999999999999999999999999976533221
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
......++..|+|||++.+..++.++||||||+++|||++|..||..... .+... .+..+....
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-~~~~~---------~~~~~~~~~ 220 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-LNLVV---------KIVQGNYTP 220 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-HHHHH---------HHHcCCCCC
Confidence 12334588999999999988889999999999999999999999965332 11111 111222222
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
.+..++..+.+++..|++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred CccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 33344455666666666666666666665554
No 255
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=305.83 Aligned_cols=247 Identities=26% Similarity=0.436 Sum_probs=208.9
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
-|.++++||+|+||+||+|.++ .|++||+|.+..+ .+.+++..|+.+|++.+.+++|++||.|.....+|+|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 4667889999999999999975 6999999988743 345688999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
-||+.|.++.+ +.++.++++..+.++.++||+|||... -||||||+.|||++-+|.+||+|||.|..+...
T Consensus 112 AGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT----- 182 (502)
T KOG0574|consen 112 AGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT----- 182 (502)
T ss_pred CCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh-----
Confidence 99999999754 457999999999999999999999888 799999999999999999999999999765321
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC--
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS-- 846 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 846 (941)
......+.||+-|||||++..-.|+.++||||+|++..||..|+.||.+.... ..++-+-....+.
T Consensus 183 --MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM----------RAIFMIPT~PPPTF~ 250 (502)
T KOG0574|consen 183 --MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM----------RAIFMIPTKPPPTFK 250 (502)
T ss_pred --HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc----------ceeEeccCCCCCCCC
Confidence 22345678999999999999999999999999999999999999999765431 1111111111122
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
-|+.++.++.++++.|+-+.|++|-++.+++++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 468888999999999999999999988877654
No 256
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=325.18 Aligned_cols=244 Identities=26% Similarity=0.399 Sum_probs=205.5
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCHH
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 693 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~ 693 (941)
-+||+|.||+||.|++. +...+|||-+.....+..+-+.+|+.+-++++|.|||+++|.+.+.+++-+.||.++||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999975 45679999988766666677889999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCc--cHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc-CCCcEEEeeeccccccCCCCCCCccc
Q 002289 694 DQLSAKSKEPL--GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVP 770 (941)
Q Consensus 694 ~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~ 770 (941)
++++.+ ..++ .+.++-.+.+||++||.|||++. |||||||-+|||++ -.|.+||+|||-++++..-
T Consensus 661 sLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi------- 729 (1226)
T KOG4279|consen 661 SLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI------- 729 (1226)
T ss_pred HHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccC-------
Confidence 999753 2345 78889999999999999999999 99999999999996 5799999999999876431
Q ss_pred cccccccccCCCcccccccccC--CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhh-hcCCCCCC
Q 002289 771 AHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV-IDGNMGSY 847 (941)
Q Consensus 771 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 847 (941)
...+...-||..|||||++..+ .|+.++|||||||++.||.||++||..-.+... .++++ +-...+++
T Consensus 730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---------AMFkVGmyKvHP~i 800 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---------AMFKVGMYKVHPPI 800 (1226)
T ss_pred CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---------hhhhhcceecCCCC
Confidence 1233456699999999999764 588999999999999999999999975444221 11121 11234678
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
|++.+.+....+.+|+.++|..||++.++++
T Consensus 801 Peelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 801 PEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 9999999999999999999999999999874
No 257
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.5e-34 Score=316.37 Aligned_cols=263 Identities=27% Similarity=0.411 Sum_probs=203.4
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-----------------CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceee
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-----------------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVS 669 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~ 669 (941)
.++|++.++||+|+||.||++... ++..||+|++..... ...+.+.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 457899999999999999998532 245799999875432 33567899999999999999999
Q ss_pred eeeccccCCcEEEEEecCCCCCHHHHHhhcCC---------CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCc
Q 002289 670 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 740 (941)
Q Consensus 670 l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~N 740 (941)
+++++...+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence 99999999999999999999999999875421 24678889999999999999999999 9999999999
Q ss_pred EEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh--CCCCCC
Q 002289 741 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPIS 818 (941)
Q Consensus 741 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt--G~~Pf~ 818 (941)
|++++++.++|+|||+++....... ........++..|+|||+..++.++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 9999999999999999876532211 011122234678999999988899999999999999999998 677886
Q ss_pred CCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
..... +....... .............+..++..+.+++..||+.+|.+||++.++.+.|+
T Consensus 236 ~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 236 QLSDE-QVIENTGE--FFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ccChH-HHHHHHHH--HHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 43321 11111000 00000001111223446678999999999999999999999998875
No 258
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2e-34 Score=309.76 Aligned_cols=251 Identities=31% Similarity=0.520 Sum_probs=203.4
Q ss_pred cCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+..... ....+.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46778899999999999999987788999998875433 34578999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+++|.+++.... ..+++..++.++.|++.|++|||+.+ ++||||||+||+++.++.++|+|||.++......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---- 154 (256)
T cd05112 83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ---- 154 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCc----
Confidence 999999986543 35789999999999999999999999 9999999999999999999999999987543221
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
........++.+|+|||++.+..++.++||||||+++|||++ |+.||..... ...... +..+.....
T Consensus 155 --~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~---------~~~~~~~~~ 222 (256)
T cd05112 155 --YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-SEVVET---------INAGFRLYK 222 (256)
T ss_pred --ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHH---------HhCCCCCCC
Confidence 011122234578999999998899999999999999999998 9999865432 111111 011111112
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 333457899999999999999999999998875
No 259
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.3e-35 Score=315.49 Aligned_cols=263 Identities=26% Similarity=0.360 Sum_probs=204.7
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|++.+.||+|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+...+..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47889999999999999999964 68899999987533 22456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCC-CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
+++++|.++++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976433 56899999999999999999999999 99999999999999999999999999876644321
Q ss_pred CCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.. ........|+..|+|||++... .++.++|+|||||++|||++|+.||........... ..
T Consensus 158 ~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~----------~~---- 220 (267)
T cd06610 158 RT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLML----------TL---- 220 (267)
T ss_pred cc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHH----------Hh----
Confidence 10 1122344588899999998876 789999999999999999999999964332111000 00
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
...+..-+...+ .........+++.+|+..||++||+++|+++||||
T Consensus 221 -------------------~~~~~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 221 -------------------QNDPPSLETGAD-----------YKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -------------------cCCCCCcCCccc-----------cccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 000000000000 01111223478888999999999999999999997
No 260
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.6e-34 Score=311.76 Aligned_cols=249 Identities=30% Similarity=0.489 Sum_probs=197.5
Q ss_pred ceeeccCcEEEEEEEeC-CCc--EEEEEEeccCC-chhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|.+. ++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999975 343 57888887533 33446788999999999 899999999999999999999999999
Q ss_pred CCHHHHHhhcC--------------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 002289 690 GTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 755 (941)
Q Consensus 690 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFG 755 (941)
|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999996532 124789999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhc
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 834 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~ 834 (941)
++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||..... .+....
T Consensus 158 l~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~----- 223 (270)
T cd05047 158 LSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEK----- 223 (270)
T ss_pred Cccccchh--------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHH-----
Confidence 98632110 00111223567999999988889999999999999999997 9999964332 111111
Q ss_pred cchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
+..+.....+..+...+.+++.+||..+|.+||++.+++..|+++.
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 ----LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ----HhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1111122233445667899999999999999999999999998764
No 261
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=8.6e-35 Score=320.85 Aligned_cols=276 Identities=26% Similarity=0.338 Sum_probs=207.0
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCC----
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG---- 678 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---- 678 (941)
...++|++.+.||+|+||.||+|..+ +|+.||+|+++.... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 589999999875432 22346788999999999999999999986544
Q ss_pred ------cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEe
Q 002289 679 ------EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 752 (941)
Q Consensus 679 ------~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~ 752 (941)
..++|+||+++ ++.+.+... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeC
Confidence 78999999975 787777544 346899999999999999999999998 9999999999999999999999
Q ss_pred eeccccccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHH
Q 002289 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 831 (941)
Q Consensus 753 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~ 831 (941)
|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 159 dfg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~------- 225 (302)
T cd07864 159 DFGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA------- 225 (302)
T ss_pred cccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-------
Confidence 9999986543221 11122345778999998865 457889999999999999999999996443211
Q ss_pred hhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH---------HHHhHhhCCCCCCCCcccccccC
Q 002289 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE---------LESIWNMMPESDTKTPEFINSEH 902 (941)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~---------L~~~~~~~~~~~~~~~dll~~~L 902 (941)
.+..+...|....|..+|.+.+.... ...+............+++.+||
T Consensus 226 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 283 (302)
T cd07864 226 ----------------------QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML 283 (302)
T ss_pred ----------------------HHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHc
Confidence 11122222333333333322211100 00111122223455678999999
Q ss_pred CCCCCCCCCCccCCCCCCC
Q 002289 903 TSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 903 ~~dP~~R~sa~e~L~Hpwf 921 (941)
..||.+||++++++.||||
T Consensus 284 ~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 284 TLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cCChhhCCCHHHHhcCCCC
Confidence 9999999999999999997
No 262
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.7e-34 Score=309.11 Aligned_cols=248 Identities=35% Similarity=0.545 Sum_probs=205.9
Q ss_pred ceeeccCcEEEEEEEeCC----CcEEEEEEeccCCchh-hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|.... +..||+|.++...... .+.+.+|++.++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999753 7899999998654433 56889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcC-------CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 690 GTLRDQLSAKS-------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 690 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
++|.+++.... ...+++..++.++.|+++||+|||+++ ++||||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999997642 356899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
... ........++..|+|||.+.+..++.++||||+|+++|||++ |..||...... +... .+..
T Consensus 158 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~---------~~~~ 222 (262)
T cd00192 158 DDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE-EVLE---------YLRK 222 (262)
T ss_pred ccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH-HHHH---------HHHc
Confidence 221 112233457789999999998889999999999999999999 69999765321 1111 1122
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
+.....+..++.++.+++.+|++.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 223 GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 333345666678899999999999999999999998876
No 263
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.2e-34 Score=310.86 Aligned_cols=239 Identities=21% Similarity=0.373 Sum_probs=188.7
Q ss_pred ceeeccCcEEEEEEEeCC-------------CcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 615 TQIGQGGYGKVYKGILPD-------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
+.||+|+||.||+|+..+ ...||+|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358999877654444567889999999999999999999999988999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc-------EEEeee
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-------AKVADF 754 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~-------~kl~DF 754 (941)
+||||+++|+|..+++.+. ..+++..++.++.||++||+|||+++ |+||||||+|||++.++. ++++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999886543 35899999999999999999999998 999999999999987664 899999
Q ss_pred ccccccCCCCCCCccccccccccccCCCcccccccc-cCCCCchhHhHHHHHHHHHHH-hCCCCCCCCchhHHHHHHHHh
Q 002289 755 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELL-TGMQPISHGKNIVREVNIAYQ 832 (941)
Q Consensus 755 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwSlG~ll~ell-tG~~Pf~~~~~~~~~~~~~~~ 832 (941)
|++...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.||..... .+... ..
T Consensus 157 g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~-~~- 222 (262)
T cd05077 157 GIPITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-AEKER-FY- 222 (262)
T ss_pred CCCccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-hHHHH-HH-
Confidence 998654211 2234778999999987 467899999999999999998 58878754321 11111 00
Q ss_pred hccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 833 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
.... .........+.+++.+||+.+|.+||++.++++.+
T Consensus 223 --------~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 223 --------EGQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --------hcCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0011 11122346788999999999999999999998765
No 264
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.7e-34 Score=313.65 Aligned_cols=200 Identities=27% Similarity=0.415 Sum_probs=171.4
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
-|++.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++|+||+++++++...+..++||||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3667889999999999999976 578899999876555556678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+++|.+++.+. ..++++..+..++.|+++||+|||+.+ |+||||||+||+++.++++||+|||++.......
T Consensus 86 ~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 86 GGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 99999988653 346899999999999999999999999 9999999999999999999999999987543211
Q ss_pred cccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......++..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 158 ---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred ---cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence 1122345888999999984 455788999999999999999999998643
No 265
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.2e-35 Score=315.58 Aligned_cols=252 Identities=26% Similarity=0.349 Sum_probs=202.2
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
+|++.+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++...+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5788999999999999999975 589999999875332 335678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|.+++... .++++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999665 46889999999999999999999998 9999999999999999999999999987653321
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||........
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------------------- 207 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR-------------------- 207 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH--------------------
Confidence 12334578899999999988899999999999999999999999975432100
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCC--ccCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS--SSMLKHPYV 921 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa--~e~L~Hpwf 921 (941)
..+.+.........|.. ......++|.+|+..||.+|+++ +|++.||||
T Consensus 208 -------~~~~~~~~~~~~~~~~~--------------------~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 208 -------DQIRAKQETADVLYPAT--------------------WSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred -------HHHHHHhccccccCccc--------------------CcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 00001100000011111 11233467888899999999999 999999998
No 266
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.9e-34 Score=310.69 Aligned_cols=260 Identities=24% Similarity=0.404 Sum_probs=200.4
Q ss_pred CCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCc------hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
+|+..+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999996 5789999999864321 124578899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-cEEEeeeccccccC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAP 761 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-~~kl~DFGla~~~~ 761 (941)
||||+++++|.+++.... ++++..++.++.|++.||+|||+++ ++|+||||+||+++.++ .+||+|||.+....
T Consensus 81 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999999996543 5889999999999999999999999 99999999999998776 69999999987664
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
..... .........++..|+|||.+.+..++.++||||+|++++||++|+.||........ ...
T Consensus 156 ~~~~~---~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~------------ 219 (268)
T cd06630 156 AKGTG---AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LAL------------ 219 (268)
T ss_pred ccccc---CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHH------------
Confidence 32110 01112234578899999999888899999999999999999999999863321100 000
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
+.+.. .... .|... +..++...+++.+|+..+|++||++.|+++||||
T Consensus 220 -------------~~~~~---~~~~---~~~~~-------------~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~ 267 (268)
T cd06630 220 -------------IFKIA---SATT---APSIP-------------EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVF 267 (268)
T ss_pred -------------HHHHh---ccCC---CCCCc-------------hhhCHHHHHHHHHHcCCCcccCcCHHHHhcCccc
Confidence 00000 0000 01000 0112233468888899999999999999999998
Q ss_pred C
Q 002289 922 S 922 (941)
Q Consensus 922 ~ 922 (941)
.
T Consensus 268 ~ 268 (268)
T cd06630 268 R 268 (268)
T ss_pred C
Confidence 5
No 267
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-34 Score=324.78 Aligned_cols=289 Identities=24% Similarity=0.372 Sum_probs=207.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccC-----CcE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 680 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 680 (941)
.++|++.+.||+|+||.||+|+.. +|+.||+|.+.... ......+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999964 68999999986422 22345678899999999999999999886543 357
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++|+||++ ++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999995 588887743 35899999999999999999999999 999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhh
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 839 (941)
...... ........|+..|+|||.+.+ ..++.++||||+||++|||++|+.||........ .... ...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~-~~~~------~~~ 225 (336)
T cd07849 157 DPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ-LNLI------LGV 225 (336)
T ss_pred cccccc----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH------HHH
Confidence 332111 111233568899999998765 5688999999999999999999999965432211 1100 000
Q ss_pred hcCCCCCCChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 840 IDGNMGSYPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 840 ~~~~~~~~~~~~~~~l~~l~-~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
.+..+.+....+.... ...+...|.. +... +....+..++...+++.+||..||++|||+.|+++|
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 226 ----LGTPSQEDLNCIISLRARNYIKSLPFK-PKVP--------WNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred ----cCCCCHHHHHHhhchhhhhHHhhcCcC-Cccc--------HHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111111110 1111111111 1110 001123345667799999999999999999999999
Q ss_pred CCCCCCCCC
Q 002289 919 PYVSSDVSG 927 (941)
Q Consensus 919 pwf~~~~~~ 927 (941)
|||..-.+.
T Consensus 293 p~~~~~~~~ 301 (336)
T cd07849 293 PYLEQYHDP 301 (336)
T ss_pred ccccccCCC
Confidence 999765543
No 268
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=8.9e-35 Score=317.87 Aligned_cols=280 Identities=25% Similarity=0.365 Sum_probs=204.7
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccC--CcEEEEEe
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVYE 685 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~LV~e 685 (941)
|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 667889999999999999976 58999999998653 22345688999999999999999999999877 89999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 996 58998886543 46899999999999999999999998 99999999999999999999999999986643321
Q ss_pred CCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ........ ..
T Consensus 156 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~----------~~ 218 (287)
T cd07840 156 ------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFE----------LC 218 (287)
T ss_pred ------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH----------Hh
Confidence 11223346788999998765 45789999999999999999999999754432 11111110 00
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC-CCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~-~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
.......+..+.++ +.......++.....+ .. .+.. ......+++++|+..+|++||+++++++||||
T Consensus 219 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 219 GSPTDENWPGVSKL---PWFENLKPKKPYKRRL---RE---FFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCCchhhccccccc---hhhhhccccccchhHH---HH---HhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00111111111111 1111111111111111 11 1111 24556789999999999999999999999998
No 269
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.5e-34 Score=314.10 Aligned_cols=280 Identities=25% Similarity=0.396 Sum_probs=207.4
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
+|++.++||+|++|.||+|+.. +|+.||||+++..... ..+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5888999999999999999975 6899999998764332 2456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcC-CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 688 SNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 688 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+ ++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 7 58988886543 346899999999999999999999998 9999999999999999999999999987543211
Q ss_pred CccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
.......++..|++||++.+ ..++.++|||||||++|||++|+.||....... ........ ..
T Consensus 155 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~----------~~ 218 (284)
T cd07836 155 -----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRI----------MG 218 (284)
T ss_pred -----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHH----------hC
Confidence 11223446789999999866 457889999999999999999999997554321 11111100 00
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 846 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 846 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
.........+... ...-...| +...... ....+..+....+++.+|++.||++|++++|+++||||
T Consensus 219 ~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 219 TPTESTWPGISQL-PEYKPTFP--RYPPQDL-------QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CCChhhHHHHhcC-chhccccc--CCChHHH-------HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 1111111111100 00001111 1111111 11223345667899999999999999999999999998
No 270
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=9.9e-35 Score=319.57 Aligned_cols=258 Identities=22% Similarity=0.335 Sum_probs=201.3
Q ss_pred cceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 614 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
...||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 457999999999999964 6899999998765444556788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.+++.. ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-------~ 172 (297)
T cd06659 106 TDIVSQ---TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-------P 172 (297)
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc-------c
Confidence 998754 34789999999999999999999999 9999999999999999999999999987543211 1
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHH
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 852 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (941)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~~~----------------------- 228 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-MKR----------------------- 228 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-----------------------
Confidence 12335588999999999988999999999999999999999999964332111 000
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCCCCCccc
Q 002289 853 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGSNLV 931 (941)
Q Consensus 853 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~~~~~~ 931 (941)
+.......... .........+++++|++.+|++||+++|+++||||...-..+-++
T Consensus 229 ------~~~~~~~~~~~-----------------~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~~~ 284 (297)
T cd06659 229 ------LRDSPPPKLKN-----------------AHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPECLV 284 (297)
T ss_pred ------HhccCCCCccc-----------------cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCccccc
Confidence 00000000000 001122234678888899999999999999999987654444333
No 271
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.9e-34 Score=309.36 Aligned_cols=253 Identities=27% Similarity=0.343 Sum_probs=191.9
Q ss_pred ceeeccCcEEEEEEEeCC---CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCC
Q 002289 615 TQIGQGGYGKVYKGILPD---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
+.||+|+||.||+|.+.+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 46799998875432 33457889999999999999999999999889999999999999
Q ss_pred CHHHHHhhcC---CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 691 TLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 691 sL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
+|.++++... ....++..+..++.|++.|++|||+.+ ++||||||+||+++.++++||+|||.++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 9999997532 234667788899999999999999999 99999999999999999999999999875432211
Q ss_pred ccccccccccccCCCcccccccccC-------CCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhh
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTH-------KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 839 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~ 839 (941)
........++..|+|||++.+. .++.++||||||+++|||++ |+.||........... .... .....
T Consensus 156 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~-~~~~~ 230 (269)
T cd05087 156 ---YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY-TVRE-QQLKL 230 (269)
T ss_pred ---eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH-Hhhc-ccCCC
Confidence 0111234567889999998642 35789999999999999996 9999965443221111 1110 00011
Q ss_pred hcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 840 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
. .+.........+.+++..|| .+|++||++.++++.|+
T Consensus 231 ~---~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 P---KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C---CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 11122234556788999999 57999999999997764
No 272
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.5e-35 Score=318.83 Aligned_cols=279 Identities=26% Similarity=0.380 Sum_probs=206.5
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|++.+.||+|+||.||+|..+ +++.||+|+++... ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 46889999999999999999975 58899999886532 2234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|++++.+..+.... ..+++..++.++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99887666655432 34889999999999999999999998 99999999999999999999999999886543221
Q ss_pred CCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||............. .. .
T Consensus 156 ------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~-------~~----~ 218 (288)
T cd07833 156 ------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQ-------KC----L 218 (288)
T ss_pred ------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------HH----h
Confidence 122334578899999999887 88999999999999999999999986543321111100 00 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC----CCCCHHHHHHHHHHhHhhCCC-CCCCCcccccccCCCCCCCCCCCccCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETD----ARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHP 919 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~----~RPs~~~v~~~L~~~~~~~~~-~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 919 (941)
+..+......+ ..++. +.+...+. ..+...++. ......+|+++||..+|++|||++++++||
T Consensus 219 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 286 (288)
T cd07833 219 GPLPPSHQELF--------SSNPRFAGVAFPEPSQP----ESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286 (288)
T ss_pred CCCCHHHhhhc--------ccCccccccccCCCCCc----HHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCC
Confidence 01111000000 00000 01111110 011111222 256678999999999999999999999999
Q ss_pred CC
Q 002289 920 YV 921 (941)
Q Consensus 920 wf 921 (941)
||
T Consensus 287 ~f 288 (288)
T cd07833 287 YF 288 (288)
T ss_pred CC
Confidence 98
No 273
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=8.5e-35 Score=317.64 Aligned_cols=259 Identities=26% Similarity=0.412 Sum_probs=196.3
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHH-HHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|++.+.||+|+||.||+|+.. +|+.||+|+++.... ..+..+..|+.. ++..+|+||+++++++...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999975 699999999875432 234556667665 666799999999999999999999999
Q ss_pred cCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcC-CCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 686 FMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 686 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
|++ |+|.+++... ....+++..++.++.|++.||+|||++ + ++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 995 7898887642 234689999999999999999999987 7 99999999999999999999999999876432
Q ss_pred CCCCCccccccccccccCCCccccccccc----CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchh
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 838 (941)
. .......++..|+|||.+.+ ..++.++|+|||||++|||++|+.||.......+....
T Consensus 157 ~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~--------- 219 (283)
T cd06617 157 S--------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ--------- 219 (283)
T ss_pred c--------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH---------
Confidence 1 11122457889999998865 45688999999999999999999999643221111110
Q ss_pred hhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 839 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
...+.....+. .+ ......+|+.+||..+|++||++++++.|
T Consensus 220 ~~~~~~~~~~~-------------------~~-------------------~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 220 VVEEPSPQLPA-------------------EK-------------------FSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHhcCCCCCCc-------------------cc-------------------cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000 00 01123457778888889999999999999
Q ss_pred CCCCCCCC
Q 002289 919 PYVSSDVS 926 (941)
Q Consensus 919 pwf~~~~~ 926 (941)
|||.....
T Consensus 262 ~~~~~~~~ 269 (283)
T cd06617 262 PFFELHLS 269 (283)
T ss_pred chhhhccc
Confidence 99987653
No 274
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.6e-34 Score=316.46 Aligned_cols=207 Identities=24% Similarity=0.389 Sum_probs=172.7
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|++.+.||+|+||.||++... +++.||+|.+..... ...+.+.+|+++++.++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46888999999999999999975 578999998875432 22356789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999996543 5889999999999999999999998 9999999999999999999999999987421111
Q ss_pred CCCc--------cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 765 IEGI--------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 765 ~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.... ..........++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~ 219 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 219 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 0000 0001112245788999999999888999999999999999999999999643
No 275
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.3e-34 Score=313.62 Aligned_cols=200 Identities=25% Similarity=0.415 Sum_probs=170.3
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|++.+.||+|+||.||+|... +++.||+|.++.... .....+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 46888999999999999999976 789999998875322 2245788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-CCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 687 MSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 687 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
+++++|.+++.... ...+++..+..++.|++.||.|||+ .+ |+||||||+||+++.++.+||+|||.+......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999886532 2368999999999999999999996 46 999999999999999999999999998754321
Q ss_pred CCCccccccccccccCCCcccccccccCC------CCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
......++..|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 157 --------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE 210 (286)
T ss_pred --------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence 112334778999999986543 478999999999999999999999643
No 276
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.1e-34 Score=311.82 Aligned_cols=199 Identities=31% Similarity=0.429 Sum_probs=174.8
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|++.+.||.|+||.||+|... +++.||+|.+.... ......+.+|+++++.++|+||+++++++.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999965 68999999987543 23345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++... .+++..++.++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 9999999999654 6899999999999999999999998 9999999999999999999999999998764321
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 153 -----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~ 201 (274)
T cd06609 153 -----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDL 201 (274)
T ss_pred -----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 1123345788999999999988999999999999999999999999643
No 277
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.4e-34 Score=315.50 Aligned_cols=256 Identities=21% Similarity=0.285 Sum_probs=191.5
Q ss_pred eeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHH---hcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 616 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLS---RLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~---~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
.||+|+||.||++... +++.||+|.+...... ....+.+|..+++ ..+|+||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999974 6899999988653221 1233445544443 3479999999999998899999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+|+|.+++..+. .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 81 GGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 999999986543 4899999999999999999999999 9999999999999999999999999987543211
Q ss_pred cccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchh-HHHHHHHHhhccchhhhcCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNI-VREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.....|+..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ....... .......
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---------~~~~~~~ 217 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---------TLTVNVE 217 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH---------hhcCCcC
Confidence 122358899999999864 56889999999999999999999999643210 0000000 0000000
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC-----CCccCCCCCCC
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKHPYV 921 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~Hpwf 921 (941)
.+. .......++|.+||..||++|+ |++|+++||||
T Consensus 218 ~~~---------------------------------------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~ 258 (279)
T cd05633 218 LPD---------------------------------------SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFF 258 (279)
T ss_pred Ccc---------------------------------------ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccc
Confidence 111 1122334677788888888888 69999999999
Q ss_pred CCCCCCCccccc
Q 002289 922 SSDVSGSNLVSG 933 (941)
Q Consensus 922 ~~~~~~~~~~~~ 933 (941)
..-.+.......
T Consensus 259 ~~~~~~~~~~~~ 270 (279)
T cd05633 259 KGIDWQQVYLQK 270 (279)
T ss_pred cCCCHhHHhcCC
Confidence 886665544333
No 278
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.1e-34 Score=310.36 Aligned_cols=258 Identities=27% Similarity=0.460 Sum_probs=207.0
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCc----EEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
..+|++.+.||+|+||.||+|.++ +|+ .||+|....... .....+.+|+.++++++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 356788899999999999999864 333 689998876543 234678899999999999999999999987 7899
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||.++...
T Consensus 85 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence 9999999999999997643 34899999999999999999999988 9999999999999999999999999998654
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
.... ........++..|+|||.+....++.++||||||+++||+++ |+.||..... .+... .+.
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~---------~~~ 225 (279)
T cd05057 161 VDEK-----EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-VEIPD---------LLE 225 (279)
T ss_pred Cccc-----ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-HHHHH---------HHh
Confidence 2211 011112224568999999988889999999999999999999 9999975432 11111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
.+.....+..+...+..++.+||..+|.+||++.++++.++++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 226 KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 122223344566778899999999999999999999999998755
No 279
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.3e-34 Score=311.51 Aligned_cols=201 Identities=27% Similarity=0.409 Sum_probs=173.1
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
.++|++.+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 356778889999999999999964 6899999998765444445688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++...+ .+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 88 CGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 99999999986543 5889999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccccccccccccCCCcccccccc---cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......|+..|+|||++. ...++.++||||+||++|||++|+.||...
T Consensus 161 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~ 212 (267)
T cd06645 161 -----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccc
Confidence 1123346889999999974 456888999999999999999999998643
No 280
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.5e-34 Score=317.67 Aligned_cols=283 Identities=22% Similarity=0.343 Sum_probs=206.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++|++.+.||+|++|+||+|... +|+.||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 47889999999999999999975 689999998865332 223568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEEEeeeccccccCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-~~~~kl~DFGla~~~~~~~ 764 (941)
|++ ++|.+++.......+++..++.++.||+.||+|||+++ ++||||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 68888886655555788889999999999999999998 999999999999985 5679999999997543211
Q ss_pred CCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
.......++..|+|||++.+ ..++.++||||+||++|||+||+.||............ + ....
T Consensus 158 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~-~------~~~~-- 221 (294)
T PLN00009 158 -------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKI-F------RILG-- 221 (294)
T ss_pred -------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-H------HHhC--
Confidence 11123356789999999876 45788999999999999999999999765432211111 0 0000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
......+.....+-.. ....|..++.. .....+..++.+.+++.+||..+|++||++.++++||||+.
T Consensus 222 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 222 --TPNEETWPGVTSLPDY-KSAFPKWPPKD---------LATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred --CCChhhccccccchhh-hhhcccCCCCC---------HHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 0000000000000000 00011111110 01112344556778999999999999999999999999976
No 281
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4e-34 Score=314.79 Aligned_cols=262 Identities=23% Similarity=0.381 Sum_probs=206.7
Q ss_pred hcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36788999999999999999996 47899999998765555566788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.+. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-- 169 (297)
T cd06656 98 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (297)
T ss_pred cCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc--
Confidence 9999999998543 4788899999999999999999998 9999999999999999999999999987543221
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......+++.|+|||.+.+..++.++|||||||++|++++|+.||........ ...........
T Consensus 170 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~----------~~~~~~~~~~~ 234 (297)
T cd06656 170 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----------LYLIATNGTPE 234 (297)
T ss_pred -----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh----------eeeeccCCCCC
Confidence 112234578899999999998899999999999999999999999965332110 00000000000
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCCC
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~ 926 (941)
. ..| ........+|+.+|+..+|++||+++++++||||.....
T Consensus 235 ~---------------------~~~----------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 235 L---------------------QNP----------------ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred C---------------------CCc----------------cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 0 000 001112236777888999999999999999999976555
Q ss_pred CCc
Q 002289 927 GSN 929 (941)
Q Consensus 927 ~~~ 929 (941)
-..
T Consensus 278 ~~~ 280 (297)
T cd06656 278 LSS 280 (297)
T ss_pred ccc
Confidence 443
No 282
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=8e-34 Score=311.64 Aligned_cols=202 Identities=26% Similarity=0.409 Sum_probs=173.7
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
.++|++.++||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++|+||+++++++..++..++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 467889999999999999999975 5899999999876655567789999999999999999999999989999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|..++.+.. ..+++..++.++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999998875433 35899999999999999999999998 999999999999999999999999998653221
Q ss_pred CccccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
........++..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 164 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 218 (292)
T cd06644 164 ----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218 (292)
T ss_pred ----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence 11122345788999999985 345678999999999999999999998643
No 283
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=6.1e-34 Score=305.08 Aligned_cols=248 Identities=30% Similarity=0.487 Sum_probs=201.2
Q ss_pred ceeeccCcEEEEEEEeCCCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCHH
Q 002289 615 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 693 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~ 693 (941)
++||+|+||.||+|.+.+++.||+|.+...... ..+.+.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999999877999999988765443 4567899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcccccc
Q 002289 694 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 773 (941)
Q Consensus 694 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 773 (941)
+++.... ..+++..++.++.+++.||+|||+++ ++||||||+||+++.++.+||+|||.++....... ...
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-----~~~ 151 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-----TVS 151 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcc-----eec
Confidence 9996543 35789999999999999999999999 99999999999999999999999999875432110 001
Q ss_pred ccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHH
Q 002289 774 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 852 (941)
Q Consensus 774 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (941)
......+..|+|||.+.++.++.++|||||||++|||++ |..||........ .. . +........+...+
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~-~~-~--------~~~~~~~~~~~~~~ 221 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT-RE-R--------IESGYRMPAPQLCP 221 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH-HH-H--------HhcCCCCCCCccCC
Confidence 111223567999999998899999999999999999999 8888865432111 11 0 01111223455667
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 853 EKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 853 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
..+.+++.+|+..+|++||++.++++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 78999999999999999999999998875
No 284
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.9e-34 Score=319.18 Aligned_cols=288 Identities=23% Similarity=0.322 Sum_probs=202.1
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCC------
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 678 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 678 (941)
.++|++.+.||+|+||.||+|... +++.||||.+...... ....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457899999999999999999975 6899999988643222 2345678999999999999999999875543
Q ss_pred --cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecc
Q 002289 679 --EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 679 --~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGl 756 (941)
..++||||+. ++|.+++.... ..+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence 4599999995 58888886543 35899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhcc
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~ 835 (941)
+.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||........ ....
T Consensus 166 ~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~-~~~~----- 236 (310)
T cd07865 166 ARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ-LTLI----- 236 (310)
T ss_pred cccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH-----
Confidence 98664332111 1112234577899999988764 478899999999999999999999875443211 1100
Q ss_pred chhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccC
Q 002289 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 915 (941)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 915 (941)
..+ .+..+.+.......+ .++............+...+. ....+....++|.+||..||++|||++|+
T Consensus 237 -~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~dli~~~l~~~P~~R~t~~e~ 304 (310)
T cd07865 237 -SQL----CGSITPEVWPGVDKL--ELFKKMELPQGQKRKVKERLK-----PYVKDPHALDLIDKLLVLDPAKRIDADTA 304 (310)
T ss_pred -HHH----hCCCChhhcccccch--hhhhhccCCCccchhhHHhcc-----cccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence 000 111111111110000 000000000000000101110 01123455789999999999999999999
Q ss_pred CCCCCC
Q 002289 916 LKHPYV 921 (941)
Q Consensus 916 L~Hpwf 921 (941)
|+||||
T Consensus 305 l~h~~f 310 (310)
T cd07865 305 LNHDFF 310 (310)
T ss_pred hcCCCC
Confidence 999998
No 285
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.8e-34 Score=308.39 Aligned_cols=246 Identities=30% Similarity=0.479 Sum_probs=201.0
Q ss_pred cCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
++|++.+.||+|+||.||++.. +++.||+|..+... ..+.+.+|+.++++++|+||+++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4688899999999999999975 67889999986532 235788999999999999999999998654 5799999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 999999997766556899999999999999999999998 999999999999999999999999998753211
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
......+..|+|||.+.+..++.++|||||||++|||++ |+.||...... +.... . ..+.....
T Consensus 154 -----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~-~--------~~~~~~~~ 218 (254)
T cd05083 154 -----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-EVKEC-V--------EKGYRMEP 218 (254)
T ss_pred -----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-HHHHH-H--------hCCCCCCC
Confidence 111223567999999998899999999999999999998 99998654321 11111 1 11112223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
+..++..+.+++.+||+.+|++||++.++++.++
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 219 PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 4456678899999999999999999999998775
No 286
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.7e-34 Score=306.18 Aligned_cols=203 Identities=28% Similarity=0.419 Sum_probs=176.8
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
.++|++.+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 367889999999999999999975 5789999998865555567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||.+.......
T Consensus 82 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 155 (262)
T cd06613 82 CGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-- 155 (262)
T ss_pred CCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh--
Confidence 9999999998654 245889999999999999999999998 9999999999999999999999999987643211
Q ss_pred CccccccccccccCCCcccccccccC---CCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......++..|+|||.+.+. .++.++||||||+++|||++|+.||....
T Consensus 156 -----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 156 -----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred -----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 112234578899999999876 88999999999999999999999997544
No 287
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.7e-34 Score=314.61 Aligned_cols=264 Identities=25% Similarity=0.359 Sum_probs=202.2
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccC--CcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~LV~ 684 (941)
++|+..+.||.|++|.||+|... +++.||+|.+..... .....+.+|++++++++|+||++++++|... +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46788899999999999999975 689999999875332 3456789999999999999999999988543 4689999
Q ss_pred ecCCCCCHHHHHhh--cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 685 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 685 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||+++++|.+++.. .....+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999998754 23345888999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
.. .....++..|+|||.+.+..++.++||||+||++|||++|+.||.......
T Consensus 158 ~~---------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------------------ 210 (287)
T cd06621 158 SL---------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP------------------ 210 (287)
T ss_pred cc---------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC------------------
Confidence 11 123346789999999999999999999999999999999999996432100
Q ss_pred CCCCCChHHHHHHHHHHHHh----cccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKC----CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c----~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
..+.+ +.+.+..+ +...+..+-. .++...+|+.+|+..+|++|||+.|+++|
T Consensus 211 ---~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 211 ---LGPIE----LLSYIVNMPNPELKDEPGNGIK-----------------WSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ---CChHH----HHHHHhcCCchhhccCCCCCCc-----------------hHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00000 00111100 0000100000 01123478899999999999999999999
Q ss_pred CCCCCCCC
Q 002289 919 PYVSSDVS 926 (941)
Q Consensus 919 pwf~~~~~ 926 (941)
|||.....
T Consensus 267 ~~~~~~~~ 274 (287)
T cd06621 267 PWIKAQMK 274 (287)
T ss_pred cccccccc
Confidence 99966544
No 288
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=322.48 Aligned_cols=260 Identities=24% Similarity=0.412 Sum_probs=206.3
Q ss_pred cCCCccceeeccCcEEEEEEEeCC-CcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
+-|.++..||.|+||.||+|..++ +-..|-|++...+.+..++|.-|+++|....||+||++++.|..++.+++..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 345567789999999999999764 4556778887666666778999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
.||-++..+-.-+ ..+.+.++..+++|++.||.|||++. |||||||+.|||++-+|.++|+|||.+.....
T Consensus 112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~----- 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS----- 182 (1187)
T ss_pred CCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh-----
Confidence 9999998876544 35899999999999999999999999 99999999999999999999999999753211
Q ss_pred ccccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
.........||++|||||+.. ..+|+.++||||||++|.||..+.+|...-.. ++.
T Consensus 183 --t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-MRV---------------- 243 (1187)
T KOG0579|consen 183 --TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRV---------------- 243 (1187)
T ss_pred --HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-HHH----------------
Confidence 123445678999999999985 46899999999999999999999888643221 111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
+.+++ ..+| ||.. ....+...+.||+.++|..||+.||+|.++|+||||+
T Consensus 244 ------------llKia----KSeP---PTLl-----------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 244 ------------LLKIA----KSEP---PTLL-----------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred ------------HHHHh----hcCC---Cccc-----------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 11111 1111 2221 1223444556788888888899999999999999998
Q ss_pred CCCC
Q 002289 923 SDVS 926 (941)
Q Consensus 923 ~~~~ 926 (941)
+..+
T Consensus 294 ~~~S 297 (1187)
T KOG0579|consen 294 NAPS 297 (1187)
T ss_pred cCCc
Confidence 6444
No 289
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.2e-34 Score=308.02 Aligned_cols=251 Identities=25% Similarity=0.349 Sum_probs=190.4
Q ss_pred eeeccCcEEEEEEEeCC---CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCC
Q 002289 616 QIGQGGYGKVYKGILPD---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 691 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 691 (941)
.||+|+||.||+|...+ ...+|+|.+..... .....+.+|++.++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 45788887764332 234568899999999999999999999999999999999999999
Q ss_pred HHHHHhhcCC---CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 692 LRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 692 L~~~l~~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
|.+++..... ...++...+.++.|++.||+|||+++ |+||||||+||++++++++||+|||+++.......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999976432 23467788899999999999999999 99999999999999999999999999865422111
Q ss_pred cccccccccccCCCccccccccc-------CCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
........++..|+|||++.. ..++.++|||||||++|||++ |..||....+... ........ ..
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~~~~----~~ 228 (269)
T cd05042 156 --YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV-LKQVVREQ----DI 228 (269)
T ss_pred --eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-HHHHhhcc----Cc
Confidence 001122345678999998743 456789999999999999999 7788865443221 11111110 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
....+..+..++..+.+++..|| .+|++||++.++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 11112234456677788899998 5999999999998875
No 290
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.4e-34 Score=312.73 Aligned_cols=238 Identities=24% Similarity=0.370 Sum_probs=187.3
Q ss_pred eeeccCcEEEEEEEeCC-------------------------CcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeee
Q 002289 616 QIGQGGYGKVYKGILPD-------------------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 670 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l 670 (941)
.||+|+||.||+|.... ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 13589998876444445678889999999999999999
Q ss_pred eeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC---
Q 002289 671 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF--- 747 (941)
Q Consensus 671 ~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~--- 747 (941)
++++......++||||+++|+|.+++... ...+++..+..++.|+++||+|||+++ |+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999998653 335788999999999999999999998 99999999999997643
Q ss_pred ----cEEEeeeccccccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHH-hCCCCCCCCc
Q 002289 748 ----TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELL-TGMQPISHGK 821 (941)
Q Consensus 748 ----~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~ell-tG~~Pf~~~~ 821 (941)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||....
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred CccceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 4899999987643211 12246788999998876 56899999999999999995 6899986543
Q ss_pred hhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 822 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
.... ...+. . ....+......+.+++.+||+.+|++||++.++++.|
T Consensus 227 ~~~~--~~~~~---------~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 227 PSEK--ERFYE---------K-KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred hHHH--HHHHH---------h-ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2111 00110 0 1112222345688999999999999999999998876
No 291
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.1e-34 Score=305.84 Aligned_cols=200 Identities=31% Similarity=0.475 Sum_probs=175.7
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC-CcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
.++|++.+.||+|+||.||+|...+ ++.||+|.+..... .+++.+|++++++++|+||+++++++...+..++|+||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3678899999999999999999764 88999999875422 56899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.... ..+++..++.++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++.......
T Consensus 80 ~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~-- 153 (256)
T cd06612 80 CGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM-- 153 (256)
T ss_pred CCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCc--
Confidence 99999999986533 46899999999999999999999998 9999999999999999999999999988654321
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 154 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~ 202 (256)
T cd06612 154 -----AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI 202 (256)
T ss_pred -----cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 1122344788999999999999999999999999999999999999643
No 292
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.6e-34 Score=345.34 Aligned_cols=259 Identities=22% Similarity=0.343 Sum_probs=202.6
Q ss_pred HHHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeecccc--
Q 002289 602 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-- 676 (941)
Q Consensus 602 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-- 676 (941)
.+.....++|.+.+.||+|+||+||+|... ++..||+|.+..... .....+..|+.++++++||||++++++|..
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 344445678999999999999999999975 578899998875322 234678899999999999999999998854
Q ss_pred CCcEEEEEecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCC----CCeEeccCCCCcEEEcC-----
Q 002289 677 EGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEAD----PPVFHRDIKASNILLDH----- 745 (941)
Q Consensus 677 ~~~~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivH~DLkp~NILl~~----- 745 (941)
....++||||+++|+|.++|... ....+++..++.|+.||+.||+|||+.+. .+||||||||+|||++.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 45689999999999999999753 23468999999999999999999998542 34999999999999964
Q ss_pred ------------CCcEEEeeeccccccCCCCCCCccccccccccccCCCccccccccc--CCCCchhHhHHHHHHHHHHH
Q 002289 746 ------------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELL 811 (941)
Q Consensus 746 ------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~ell 811 (941)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELL 237 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELC 237 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHH
Confidence 3359999999997653211 1234468999999999864 45889999999999999999
Q ss_pred hCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 812 TGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 812 tG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
+|+.||.............. ..........+..+.+++..||..+|.+||++.+++.
T Consensus 238 TGk~PF~~~~~~~qli~~lk----------~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 238 SGKTPFHKANNFSQLISELK----------RGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HCCCCCCcCCcHHHHHHHHh----------cCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 99999976554333222111 1111111234567889999999999999999999984
No 293
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.6e-34 Score=312.35 Aligned_cols=202 Identities=29% Similarity=0.392 Sum_probs=175.0
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
.++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++|+||+++++++......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 467889999999999999999975 6899999998866555567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-- 157 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc--
Confidence 99999999986543 35899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......++..|+|||++. +..++.++||||||+++|||++|+.||...
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 158 -----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred -----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 1123345888999999975 345778999999999999999999999643
No 294
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.2e-34 Score=306.40 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=173.5
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|++++++++|+||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5888999999999999999964 68899999987543 22346788999999999999999999999988999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-CcEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~-~~~kl~DFGla~~~~~~~~ 765 (941)
+++++|.+++.......+++..++.++.|+++||+|||+++ ++|+||||+||+++++ +.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999998765566899999999999999999999998 9999999999999855 468999999998654321
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 204 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA 204 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC
Confidence 112345788999999999888999999999999999999999998654
No 295
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.3e-34 Score=313.32 Aligned_cols=266 Identities=26% Similarity=0.363 Sum_probs=203.9
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
.++|++.+.||+|+||+||++... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 356788899999999999999965 68999999876543 2335688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
|+++++|.+++... ..+++..+..++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 84 FMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred cCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 99999999998654 358899999999999999999997 46 999999999999999999999999998654211
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
......|+..|+|||++.+..++.++|||||||++||+++|+.||.......+
T Consensus 158 --------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~------------------- 210 (284)
T cd06620 158 --------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD------------------- 210 (284)
T ss_pred --------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh-------------------
Confidence 11234588999999999888999999999999999999999999974332110
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 924 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~ 924 (941)
.......+.+.....+...+..-++. + ......+|+.+|+..||++|||++|+++||||...
T Consensus 211 ---~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 211 ---GQDDPMGILDLLQQIVQEPPPRLPSS-D--------------FPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred ---hhhhhhHHHHHHHHHhhccCCCCCch-h--------------cCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00111112222222222222111111 0 11123467777888888888888888888888553
No 296
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.7e-34 Score=310.12 Aligned_cols=249 Identities=32% Similarity=0.509 Sum_probs=199.7
Q ss_pred ceeeccCcEEEEEEEeCC-------CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 615 TQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+.||+|+||.||+|+..+ ++.||+|.+..... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 25799998765432 3356788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-----CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-----cEEEeeecc
Q 002289 687 MSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-----TAKVADFGL 756 (941)
Q Consensus 687 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-----~~kl~DFGl 756 (941)
+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 234788999999999999999999998 99999999999999887 899999999
Q ss_pred ccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhcc
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 835 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~ 835 (941)
++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||....+... ...
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~-~~~------ 225 (269)
T cd05044 158 ARDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV-LQH------ 225 (269)
T ss_pred cccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH-HHH------
Confidence 8765332211 11122345678999999999999999999999999999998 9999965443211 110
Q ss_pred chhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
+..+.....+...+..+.+++.+||..+|.+||++.++.+.|+
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 226 ---VTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---HhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111222344556788899999999999999999999998875
No 297
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1e-33 Score=306.32 Aligned_cols=203 Identities=31% Similarity=0.449 Sum_probs=170.3
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-----hhhHhHHHHHHHHHhcCCCceeeeeecccc--CCcE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 680 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 680 (941)
.+|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.++++++|+||+++++++.. .+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999964 689999998764321 223468889999999999999999998865 3567
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++|+||+++++|.+++.... .+++...+.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 89999999999999996543 4788999999999999999999998 999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
...... ........++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 157 QTICMS----GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred cccccc----CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 321110 11112345788999999999988999999999999999999999999643
No 298
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.7e-34 Score=311.77 Aligned_cols=247 Identities=27% Similarity=0.413 Sum_probs=196.6
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4566788999999999999865 57899999887543 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++++|.+++.. ..+++..++.++.|+++|+.|||+++ ++|+||+|+||++++++.++|+|||++.......
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999998854 35789999999999999999999998 9999999999999999999999999987653221
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
.......++..|+|||++.+..++.++|||||||++|||++|+.||........ . ..+........
T Consensus 156 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~---------~~~~~~~~~~~ 221 (277)
T cd06642 156 ----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-L---------FLIPKNSPPTL 221 (277)
T ss_pred ----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-H---------hhhhcCCCCCC
Confidence 111234578899999999998999999999999999999999999864322110 0 01111112223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
+..++..+.+++.+|++.+|++||++.+++++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 34455667777778888888888877777753
No 299
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.3e-34 Score=311.79 Aligned_cols=239 Identities=23% Similarity=0.408 Sum_probs=191.0
Q ss_pred ceeeccCcEEEEEEEeCC--------CcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 615 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998642 234888887654444456788999999999999999999999988999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc--------EEEeeecccc
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--------AKVADFGLSR 758 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~--------~kl~DFGla~ 758 (941)
+++|+|.++++.... .+++..++.++.||+.||+|||+++ |+||||||+||+++.++. ++++|||.+.
T Consensus 81 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999976443 5889999999999999999999999 999999999999987765 6999999886
Q ss_pred ccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCC-CCCCCCchhHHHHHHHHhhccc
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~-~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
.... .....++..|+|||++.+ ..++.++|||||||++|||++|. .||..... ......
T Consensus 157 ~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-~~~~~~------- 217 (258)
T cd05078 157 TVLP-----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-QKKLQF------- 217 (258)
T ss_pred ccCC-----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-HHHHHH-------
Confidence 4321 122357789999999987 45789999999999999999995 45443222 111110
Q ss_pred hhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 837 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
. .....+|...+.++.+++.+||+.+|++||+++++++.|
T Consensus 218 ---~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 218 ---Y-EDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ---H-HccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 112234444557789999999999999999999998875
No 300
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.4e-34 Score=308.93 Aligned_cols=254 Identities=27% Similarity=0.419 Sum_probs=204.3
Q ss_pred cCCCccceeeccCcEEEEEEEeC------CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 681 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 681 (941)
++|++...||+|+||.||+|+.+ +.+.|++|.+...... ..+.+.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 67888999999999999999964 2467999988754433 3467899999999999999999999999989999
Q ss_pred EEEecCCCCCHHHHHhhcCC-------CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeee
Q 002289 682 LVYEFMSNGTLRDQLSAKSK-------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 754 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DF 754 (941)
+||||+++|+|.++++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999975441 25899999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhh
Q 002289 755 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833 (941)
Q Consensus 755 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~ 833 (941)
|++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||....... .+...
T Consensus 162 ~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-~~~~~--- 231 (275)
T cd05046 162 SLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-VLNRL--- 231 (275)
T ss_pred ccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-HHHHH---
Confidence 99875432211 11122345678999999988888999999999999999999 788886433211 11110
Q ss_pred ccchhhhcCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 834 SMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 834 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
..+.. ...+..++..+.+++.+|++.+|.+||++.++++.+.
T Consensus 232 ------~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 ------QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ------HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00111 1123455678999999999999999999999998764
No 301
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=9.7e-34 Score=308.47 Aligned_cols=247 Identities=27% Similarity=0.417 Sum_probs=193.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..|+..+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|++++++++|+||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45777889999999999999975 58899999987543 23356788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++|+|.+++... ++++.....++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06640 84 LGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence 9999999998642 4788889999999999999999998 9999999999999999999999999997653321
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......++..|+|||++.+..++.++|||||||++|||++|+.||........ . ..+.......
T Consensus 156 -----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~---------~~~~~~~~~~ 220 (277)
T cd06640 156 -----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-L---------FLIPKNNPPT 220 (277)
T ss_pred -----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-h---------hhhhcCCCCC
Confidence 112234578899999999988899999999999999999999999965432110 0 0001111222
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
.+..++..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 34445555666666666655555555555543
No 302
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-36 Score=319.47 Aligned_cols=252 Identities=26% Similarity=0.413 Sum_probs=212.1
Q ss_pred cceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCC
Q 002289 614 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
.+.||+|-||+||-|+.+ +|+.||||++.+... ..+.++.+|+.+|+.++||.||.+.-.|+..+..++|||.+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 578999999999999964 799999999876432 34578999999999999999999999999999999999999 67
Q ss_pred CHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC---CcEEEeeeccccccCCCCCCC
Q 002289 691 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 691 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~---~~~kl~DFGla~~~~~~~~~~ 767 (941)
+..+++-......+++...+.++.||+.||.|||.++ |+|+||||+|||+.+. .++||+|||.|+....
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE----- 719 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE----- 719 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecch-----
Confidence 8878776666677999999999999999999999999 9999999999999643 4899999999998754
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
......+.||+.|+|||+++.+.|...-|+||.||++|--++|..||..+++..++++.+. . -+
T Consensus 720 ---ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa------------F-My 783 (888)
T KOG4236|consen 720 ---KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA------------F-MY 783 (888)
T ss_pred ---hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccc------------c-cc
Confidence 3445678899999999999999999999999999999999999999987776555443210 0 01
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCC
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~ 925 (941)
|.+ | +.+..+.+.|||+.+|++.-++|.|.+..|.|||++.-+
T Consensus 784 Pp~----------------P-------------------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 784 PPN----------------P-------------------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred CCC----------------c-------------------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 111 1 123345667999999999999999999999999998744
No 303
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.1e-34 Score=311.41 Aligned_cols=255 Identities=22% Similarity=0.379 Sum_probs=201.9
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
|...+.||+|++|.||+|... +++.||+|++........+.+.+|+.+++.++|+||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444679999999999999964 6899999998765545556788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
++|.+++.. ..+++..+..++.|++.||+|||+++ |+||||+|+||+++.++.++|+|||.+.......
T Consensus 101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~----- 169 (285)
T cd06648 101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV----- 169 (285)
T ss_pred CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC-----
Confidence 999999865 34888999999999999999999999 9999999999999999999999999886543211
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ....
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-~~~~-------------------- 226 (285)
T cd06648 170 --PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-AMKR-------------------- 226 (285)
T ss_pred --cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-HHHH--------------------
Confidence 11123458889999999998889999999999999999999999986433211 0000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCC
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~ 925 (941)
+.... .|...+ .........+|+++|+..+|++||++.|+++||||+..-
T Consensus 227 ---------~~~~~------~~~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 227 ---------IRDNL------PPKLKN-----------LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred ---------HHhcC------CCCCcc-----------cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 00000 000000 001122345788889999999999999999999997633
No 304
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.7e-34 Score=311.66 Aligned_cols=212 Identities=27% Similarity=0.401 Sum_probs=175.6
Q ss_pred cchHHHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccc-
Q 002289 599 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD- 675 (941)
Q Consensus 599 ~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~- 675 (941)
+.++.+..+.++|++.+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.+++.+ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 344566668899999999999999999999965 68899999876432 2245688899999999 6999999999873
Q ss_pred ----cCCcEEEEEecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcE
Q 002289 676 ----EEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 749 (941)
Q Consensus 676 ----~~~~~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~ 749 (941)
..+..++||||+++++|.++++.. ....+++..+..++.|+++||.|||+.+ |+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 345689999999999999988642 2346889999999999999999999998 9999999999999999999
Q ss_pred EEeeeccccccCCCCCCCccccccccccccCCCccccccccc-----CCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 750 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 750 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
||+|||+++...... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||....
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 164 KLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred EEccCCceeecccCC-------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 999999987653221 11223458899999999853 457889999999999999999999996543
No 305
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.1e-34 Score=310.30 Aligned_cols=210 Identities=29% Similarity=0.452 Sum_probs=176.0
Q ss_pred chHHHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeecccc-
Q 002289 600 TYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 676 (941)
Q Consensus 600 ~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~- 676 (941)
++.++....+.|++.+.||+|+||.||+|... +++.||+|++.... .....+..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44555667789999999999999999999974 68999999986533 2335688899999998 79999999999843
Q ss_pred -----CCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEE
Q 002289 677 -----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 751 (941)
Q Consensus 677 -----~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl 751 (941)
.+..++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence 457899999999999999997655566888899999999999999999999 999999999999999999999
Q ss_pred eeeccccccCCCCCCCccccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 752 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 752 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
+|||++....... .......|+..|+|||.+. +..++.++|||||||++|||++|+.||...
T Consensus 163 ~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~ 229 (282)
T cd06636 163 VDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM 229 (282)
T ss_pred eeCcchhhhhccc-------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcccc
Confidence 9999987543211 1122345888999999986 346788999999999999999999999643
No 306
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.4e-34 Score=318.55 Aligned_cols=288 Identities=26% Similarity=0.368 Sum_probs=204.2
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh--hHhHHHHHHHHHhcCCCceeeeeeccccC-------
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEE------- 677 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------- 677 (941)
.++|++.++||+|+||.||+|... +++.||+|++....... ...+.+|++++++++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999965 68999999886533222 34578899999999999999999987443
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecc
Q 002289 678 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 678 -~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGl 756 (941)
...++|+||++ +++.+.+... ...+++..++.++.|+++||+|||+++ |+||||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCcc
Confidence 34699999995 5787777543 345899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCcc----ccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHH
Q 002289 757 SRLAPVPDIEGIV----PAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 831 (941)
Q Consensus 757 a~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~ 831 (941)
++........... .........++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~ 240 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIF 240 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 9765432211110 1112234567889999998865 45789999999999999999999998654432 2111111
Q ss_pred hhccchhhhcCCCCCCChHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC
Q 002289 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 910 (941)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c-~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 910 (941)
. .. ...++........+.... +...+...+...+ .+........+|+.+||..||++||
T Consensus 241 ~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~l~~~p~~R~ 300 (311)
T cd07866 241 K------LC----GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE----------RFGKLGPEGLDLLSKLLSLDPYKRL 300 (311)
T ss_pred H------Hh----CCCChhhchhhhhcccccccccCCCCCccHHH----------HcccCChhHHHHHHHHcccCcccCc
Confidence 0 00 000111111110000000 0001111111111 1223345567899999999999999
Q ss_pred CCccCCCCCCC
Q 002289 911 SSSSMLKHPYV 921 (941)
Q Consensus 911 sa~e~L~Hpwf 921 (941)
|+.|++.||||
T Consensus 301 t~~ell~~~~f 311 (311)
T cd07866 301 TASDALEHPYF 311 (311)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 307
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.6e-34 Score=311.81 Aligned_cols=267 Identities=27% Similarity=0.446 Sum_probs=207.3
Q ss_pred cCCCccceeeccCcEEEEEEEeC-----CCcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeecccc--CCcE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 680 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 680 (941)
+.|+..+.||+|+||.||+|.+. +++.||||+++..... ..+.+.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777899999999999999853 3689999999865443 45689999999999999999999999876 5578
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999997643 25899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHH-HHHH---Hhhccc
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE-VNIA---YQSSMM 836 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~-~~~~---~~~~~~ 836 (941)
...... ........++..|+|||.+.+..++.++||||||+++|||++|+.|+......... .... .....+
T Consensus 160 ~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 160 PEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 422110 01111233456799999999889999999999999999999999998643211100 0000 000001
Q ss_pred hhhhc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 837 FSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 837 ~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
...+. ......+..++.++.+++.+|++.+|++||++.+++++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111 112223455668899999999999999999999999999865
No 308
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3e-34 Score=322.26 Aligned_cols=284 Identities=23% Similarity=0.358 Sum_probs=207.1
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccC---------
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------- 677 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--------- 677 (941)
..+|.+.+.||+|+||.||+|... +|+.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999964 6899999998766555567788999999999999999999876543
Q ss_pred -----CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc-CCCcEEE
Q 002289 678 -----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKV 751 (941)
Q Consensus 678 -----~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~-~~~~~kl 751 (941)
...++||||++ ++|.+++.. ..+++..++.++.||+.||+|||+.+ |+||||||+||+++ +++.+|+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEE
Confidence 35789999996 699888853 24889999999999999999999999 99999999999997 4567999
Q ss_pred eeeccccccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002289 752 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 830 (941)
Q Consensus 752 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~ 830 (941)
+|||.++........ ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........
T Consensus 157 ~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~-- 230 (342)
T cd07854 157 GDFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL-- 230 (342)
T ss_pred CCcccceecCCcccc----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--
Confidence 999999765322110 111122357889999998754 5678899999999999999999999976554322111
Q ss_pred HhhccchhhhcCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCC
Q 002289 831 YQSSMMFSVIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 909 (941)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R 909 (941)
.++. .+....+....+ ..+...+.......+.+..+ ..+..+....+|+++||+.||++|
T Consensus 231 --------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~L~~dP~~R 291 (342)
T cd07854 231 --------ILES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRD----------LLPGVNPEALDFLEQILTFNPMDR 291 (342)
T ss_pred --------HHHh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHHH----------HccCCCHHHHHHHHHHhCCCchhc
Confidence 1111 111111111111 11222222111112222221 123344556789999999999999
Q ss_pred CCCccCCCCCCCCC
Q 002289 910 PSSSSMLKHPYVSS 923 (941)
Q Consensus 910 ~sa~e~L~Hpwf~~ 923 (941)
||++|++.||||+.
T Consensus 292 ~t~~ell~h~~~~~ 305 (342)
T cd07854 292 LTAEEALMHPYMSC 305 (342)
T ss_pred cCHHHHhCCCcccc
Confidence 99999999999974
No 309
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=6.6e-34 Score=315.69 Aligned_cols=291 Identities=21% Similarity=0.218 Sum_probs=198.6
Q ss_pred cceeeccCcEEEEEEEeCCCcEEEEEEeccC--CchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCC
Q 002289 614 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 691 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 691 (941)
.+.+|.|+++.||++.. +++.||||+++.. .....+.+.+|+++++.++|+||+++++++...+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33444555555555544 6899999998754 23344678999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcccc
Q 002289 692 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 771 (941)
Q Consensus 692 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 771 (941)
|.+++.......+++.....++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.+..............
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 999998765556889999999999999999999999 99999999999999999999999999875532221111111
Q ss_pred ccccccccCCCccccccccc--CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 772 HVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 772 ~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||.............. ......++... .+.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~ 238 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR--GTVPCLLDKST--YPL 238 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCccccccCc--hhh
Confidence 12233457789999999876 4588899999999999999999999976543222111100 00001111000 000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHH-HHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCC
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMSE-VMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~~-v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~ 925 (941)
.. ..... .+ .+..-+.... .-.... ........+|+.+||.+||++|||++|+|+||||....
T Consensus 239 ~~-~~~~~---~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 239 YE-DSMSQ---SR---SSNEHPNNRDSVDHPYT------RTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hc-CCcCc---cc---ccccccchhhhhhcchh------hHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 00 00000 00 0000000000 000000 00112345789999999999999999999999998654
No 310
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-35 Score=310.46 Aligned_cols=132 Identities=21% Similarity=0.352 Sum_probs=115.7
Q ss_pred hcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhhHhHHHHHHHHHhcC-----C---Cceeeeeecccc--
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----H---RNLVSLVGYCDE-- 676 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~nIv~l~~~~~~-- 676 (941)
..+|.+.++||.|.|++||+|.+ .+.+.||+|+.+.. ....+....||++|++++ | .+||+|+++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 47899999999999999999996 46789999999863 344567889999999984 2 379999999954
Q ss_pred --CCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE
Q 002289 677 --EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 743 (941)
Q Consensus 677 --~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl 743 (941)
..+.|+|+|++ |.+|..+|....-+.++...+++|++||+.||.|||+++. |||.||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcceeee
Confidence 45899999999 8899999988777779999999999999999999998774 9999999999999
No 311
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.2e-33 Score=303.81 Aligned_cols=250 Identities=34% Similarity=0.548 Sum_probs=203.6
Q ss_pred CCccceeeccCcEEEEEEEeCC-----CcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 611 FNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
+++.+.||+|+||.||++.+.+ +..||+|+++..... ..+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999753 388999999765443 4568999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++++|.+++.......+++..++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999997654433899999999999999999999998 9999999999999999999999999998664332
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
.. ......++..|+|||.+.+..++.++||||+|++++||++ |+.||..... ..... .+....
T Consensus 158 ~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-~~~~~---------~~~~~~ 221 (258)
T smart00219 158 YY------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-EEVLE---------YLKKGY 221 (258)
T ss_pred cc------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH---------HHhcCC
Confidence 11 0112236789999999988889999999999999999998 7788764322 11111 111122
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
....+...+.++.+++.+|+..+|++||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 233444567789999999999999999999998865
No 312
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.4e-33 Score=303.19 Aligned_cols=203 Identities=29% Similarity=0.433 Sum_probs=170.1
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-----chhhHhHHHHHHHHHhcCCCceeeeeeccccC--CcE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 680 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 680 (941)
++|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999965 58999999875321 12235678899999999999999999988653 467
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||+++++|.+++.... .+++...++++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999986543 4788889999999999999999999 999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
...... ........|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 157 QTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred cccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 322110 11122345888999999999888999999999999999999999999643
No 313
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.3e-34 Score=321.41 Aligned_cols=204 Identities=24% Similarity=0.304 Sum_probs=164.8
Q ss_pred ceeecc--CcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
..||+| +||+||+|.+. +|+.||+|+...... ...+.+.+|+.+++.++||||++++++|...+..++||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 99999999974 799999999875332 2346788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.++++||+.+............
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99999997765556899999999999999999999998 999999999999999999999999865433211110000
Q ss_pred ccccccccccCCCcccccccccC--CCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.........++..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~ 214 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDML 214 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcC
Confidence 00001112345679999999763 47889999999999999999999997554
No 314
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-34 Score=313.94 Aligned_cols=203 Identities=25% Similarity=0.353 Sum_probs=170.8
Q ss_pred hcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccC--CchhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
...|++.++||+||.+.||++...+.+.+|+|++... +.....-|..|+..|.++ .|.+|+++++|-..++.+|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 3468889999999999999999888888999876642 333356799999999999 4999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||= ..+|..+|.........| .++.+..|++.|+.++|+++ |||.||||.|+|+-. |.+||+|||+|.....+.
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred ecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 987 679999998776655556 77889999999999999999 999999999999864 799999999998765432
Q ss_pred CCCccccccccccccCCCcccccccccCC-----------CCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHK-----------LTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
+ .-.....+||+.||+||.+.... ++.++||||+||+||+|+.|+.||..-.
T Consensus 514 -T----sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~ 576 (677)
T KOG0596|consen 514 -T----SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII 576 (677)
T ss_pred -c----ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence 1 22334567999999999986432 5678999999999999999999996543
No 315
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.5e-34 Score=320.80 Aligned_cols=290 Identities=22% Similarity=0.351 Sum_probs=211.7
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeecccc----CCcE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQ 680 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~ 680 (941)
.++|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++|+||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 378999999999999999999965 689999999875322 234567889999999999999999998753 3468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||+. ++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 69999886543 4899999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhh
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 839 (941)
...... .........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .....
T Consensus 158 ~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~--------- 224 (334)
T cd07855 158 SSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLI--------- 224 (334)
T ss_pred cccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHH---------
Confidence 332211 1112233468889999999865 568899999999999999999999996543321 11110
Q ss_pred hcCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCC
Q 002289 840 IDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 918 (941)
Q Consensus 840 ~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~H 918 (941)
....+..+.+..... .+.+..+++..+...+..- ....+.......++|.+||+.||++||++++++.|
T Consensus 225 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 225 -LSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPW---------SKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred -HHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCH---------HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 001111121111111 1122233333332222111 01123345566789999999999999999999999
Q ss_pred CCCCCCCC
Q 002289 919 PYVSSDVS 926 (941)
Q Consensus 919 pwf~~~~~ 926 (941)
|||..-..
T Consensus 295 ~~~~~~~~ 302 (334)
T cd07855 295 PFLAQYHD 302 (334)
T ss_pred hhhhhccC
Confidence 99975443
No 316
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.9e-34 Score=320.23 Aligned_cols=283 Identities=21% Similarity=0.327 Sum_probs=208.0
Q ss_pred HHHHHHhcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccC-
Q 002289 602 GEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE- 677 (941)
Q Consensus 602 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~- 677 (941)
.++....++|++.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|++++++++|+||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 45566789999999999999999999985 478999999987532 22345678899999999999999999987532
Q ss_pred -----CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEe
Q 002289 678 -----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 752 (941)
Q Consensus 678 -----~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~ 752 (941)
...++|++++ +++|.+++... .+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~ 162 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKIL 162 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEe
Confidence 3468888887 88999888543 4889999999999999999999999 9999999999999999999999
Q ss_pred eeccccccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHH
Q 002289 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 831 (941)
Q Consensus 753 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~ 831 (941)
|||+++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .....
T Consensus 163 dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~ 231 (345)
T cd07877 163 DFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLIL 231 (345)
T ss_pred cccccccccc----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence 9999875321 1223457889999999876 5688899999999999999999999965433211 11100
Q ss_pred hhccchhhhcCCCCCCChHHHHH----HHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCC
Q 002289 832 QSSMMFSVIDGNMGSYPSECVEK----FIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEE 907 (941)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~----l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~ 907 (941)
... ...+...... .......+....|..+. . ......++...+||.+||..||+
T Consensus 232 ---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~li~~~L~~dp~ 289 (345)
T cd07877 232 ---------RLV-GTPGAELLKKISSESARNYIQSLTQMPKMNF--A----------NVFIGANPLAVDLLEKMLVLDSD 289 (345)
T ss_pred ---------HHh-CCCCHHHHhhcccHhHHHHHHHhcccCCcch--h----------hhcCCCCHHHHHHHHHHcCCChh
Confidence 000 0011111110 01111112222221111 0 01112345567899999999999
Q ss_pred CCCCCccCCCCCCCCCC
Q 002289 908 TPPSSSSMLKHPYVSSD 924 (941)
Q Consensus 908 ~R~sa~e~L~Hpwf~~~ 924 (941)
+|+++.|++.||||..-
T Consensus 290 ~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 290 KRITAAQALAHAYFAQY 306 (345)
T ss_pred hcCCHHHHhcChhhhhc
Confidence 99999999999999853
No 317
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.6e-34 Score=321.70 Aligned_cols=281 Identities=23% Similarity=0.361 Sum_probs=202.8
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccC------C
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 678 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 678 (941)
.++|.+.+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|+++++.++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999964 689999999865321 1234678999999999999999999988644 3
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
..++|+||+. .+|.++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 4699999995 57777652 24888999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ +....
T Consensus 166 ~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~-~~~~~------ 228 (342)
T cd07879 166 HADA----------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQIL------ 228 (342)
T ss_pred CCCC----------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH------
Confidence 5421 1123356789999999876 4688999999999999999999999975443221 11111
Q ss_pred hhhcCCCCCCChHHHHHHHHHHH-HhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCC
Q 002289 838 SVIDGNMGSYPSECVEKFIKLAL-KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 916 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~-~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 916 (941)
.. .+...+.....+..... ......|. .|. ..+...++..+....+||.+||+.||++||+++|++
T Consensus 229 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 229 ---KV-TGVPGPEFVQKLEDKAAKSYIKSLPK-YPR--------KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred ---Hh-cCCCCHHHHHHhcccchHHHHhhcCC-ccc--------chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 00 01111111111110000 00000000 000 011112234455667999999999999999999999
Q ss_pred CCCCCCCCCC
Q 002289 917 KHPYVSSDVS 926 (941)
Q Consensus 917 ~Hpwf~~~~~ 926 (941)
.||||..-..
T Consensus 296 ~h~~f~~~~~ 305 (342)
T cd07879 296 EHPYFDSFRD 305 (342)
T ss_pred cCcchhhccc
Confidence 9999977543
No 318
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-35 Score=341.47 Aligned_cols=268 Identities=24% Similarity=0.295 Sum_probs=212.8
Q ss_pred hHHHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeecccc
Q 002289 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDE 676 (941)
Q Consensus 601 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 676 (941)
..++....++|.++++||+|+||.|..++.+ ++++||+|+++...+- ...-|..|-.+|..-+.+=|+.++-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3466667789999999999999999999975 6899999999863322 23467888899999999999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecc
Q 002289 677 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 677 ~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGl 756 (941)
+.+.|+|||||+||+|-.++.+.. .+++..++.++..|+-||.-+|+.| +|||||||+|||+|..|++||+|||.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchh
Confidence 999999999999999999997665 6899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccccCCCccccccccc-----CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHH
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 831 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~ 831 (941)
+-.+.... .-.+...+|||.|.+||++.. +.|+..+|+||+||++|||+.|..||..+. +++-+....
T Consensus 222 Clkm~~dG------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-lveTY~KIm 294 (1317)
T KOG0612|consen 222 CLKMDADG------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-LVETYGKIM 294 (1317)
T ss_pred HHhcCCCC------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-HHHHHHHHh
Confidence 87654322 233455679999999999862 568999999999999999999999996432 222111111
Q ss_pred hhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC
Q 002289 832 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 911 (941)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~s 911 (941)
.. ...-.+|++ .+...++.+||+++++ +|+.|+.
T Consensus 295 ~h--------k~~l~FP~~-------------------------------------~~VSeeakdLI~~ll~-~~e~RLg 328 (1317)
T KOG0612|consen 295 NH--------KESLSFPDE-------------------------------------TDVSEEAKDLIEALLC-DREVRLG 328 (1317)
T ss_pred ch--------hhhcCCCcc-------------------------------------cccCHHHHHHHHHHhc-Chhhhcc
Confidence 00 000111100 1123344567776554 5889988
Q ss_pred ---CccCCCCCCCCCCCC
Q 002289 912 ---SSSMLKHPYVSSDVS 926 (941)
Q Consensus 912 ---a~e~L~Hpwf~~~~~ 926 (941)
++++-.||||.+..|
T Consensus 329 rngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 329 RNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred cccHHHHHhCccccCCCh
Confidence 999999999999999
No 319
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.1e-33 Score=302.01 Aligned_cols=199 Identities=30% Similarity=0.480 Sum_probs=172.6
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-----chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
+|+..+.||+|+||.||+|... +++.|++|.+.... .+..+.+.+|+++++.++|+||+++++++...+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777899999999999999976 78999999876533 12346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+|+||+|+||+++.++.+||+|||.+......
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999996543 4789999999999999999999999 999999999999999999999999998765322
Q ss_pred CCCCccccccccccccCCCcccccccccCC-CCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
. ......++..|+|||.+.... ++.++|+||||+++|||++|+.||....
T Consensus 156 ~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 156 S--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred c--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 1 123345788999999988766 8999999999999999999999996543
No 320
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=6e-34 Score=310.67 Aligned_cols=276 Identities=24% Similarity=0.351 Sum_probs=198.9
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcC-CCceeeeeeccccC--CcEEEEEe
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLVYE 685 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~LV~e 685 (941)
|++.+.||+|+||.||+|... +++.||+|+++.... .......+|+.+++++. |+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999965 689999999875322 22234567899999885 99999999999877 88999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|++ |+|.+.+.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~- 153 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP- 153 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC-
Confidence 996 68888886543 45899999999999999999999999 999999999999999 999999999997653221
Q ss_pred CCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
......++..|+|||++.. ..++.++||||+||++|||++|+.||....... .+.... . ..
T Consensus 154 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~~~~~~------~----~~ 215 (282)
T cd07831 154 -------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-QIAKIH------D----VL 215 (282)
T ss_pred -------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-HHHHHH------H----Hc
Confidence 1122357889999998654 557889999999999999999999996544321 111110 0 01
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
+..+......+..- ...-...|..-+. .+....+.......+++.+||..+|++||+++|+++||||
T Consensus 216 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 216 GTPDAEVLKKFRKS-RHMNYNFPSKKGT---------GLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred CCCCHHHHHhhccc-ccccccCcccccc---------cHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 11112111110000 0000000100000 0111122335666789999999999999999999999998
No 321
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=5.5e-34 Score=307.62 Aligned_cols=192 Identities=24% Similarity=0.384 Sum_probs=167.6
Q ss_pred eeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+++++.++|+||+++++++.+....++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999975 489999999875332 2346789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.+++.+.. .+++..+..++.|+++||+|||+++ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------- 147 (262)
T cd05572 81 WTILRDRG--LFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------- 147 (262)
T ss_pred HHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--------
Confidence 99996543 4889999999999999999999998 9999999999999999999999999998654321
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
......++..|+|||.+.+..++.++|+||+|+++|||++|+.||....
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 1223457889999999988889999999999999999999999996543
No 322
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.8e-33 Score=308.64 Aligned_cols=264 Identities=27% Similarity=0.393 Sum_probs=201.2
Q ss_pred hHHHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccC-
Q 002289 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE- 677 (941)
Q Consensus 601 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~- 677 (941)
..++..+.++|++.+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 3455556889999999999999999999974 68999999986532 2245678899999998 899999999998543
Q ss_pred ----CcEEEEEecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEE
Q 002289 678 ----GEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 751 (941)
Q Consensus 678 ----~~~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl 751 (941)
+..++||||+++++|.++++.. ....+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl 169 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKL 169 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEE
Confidence 3589999999999999988642 3346899999999999999999999998 999999999999999999999
Q ss_pred eeeccccccCCCCCCCccccccccccccCCCcccccccccC-----CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHH
Q 002289 752 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 826 (941)
Q Consensus 752 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~ 826 (941)
+|||++....... .......|+..|+|||++... .++.++|||||||++|||++|+.||.........
T Consensus 170 ~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~ 242 (291)
T cd06639 170 VDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL 242 (291)
T ss_pred eecccchhccccc-------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHH
Confidence 9999987653221 111234578899999997643 3678999999999999999999999654321110
Q ss_pred HHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCC
Q 002289 827 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE 906 (941)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP 906 (941)
.. +........ .+| ........+++.+|+..+|
T Consensus 243 ~~----------~~~~~~~~~-----------------~~~--------------------~~~~~~l~~li~~~l~~~p 275 (291)
T cd06639 243 FK----------IPRNPPPTL-----------------LHP--------------------EKWCRSFNHFISQCLIKDF 275 (291)
T ss_pred HH----------HhcCCCCCC-----------------Ccc--------------------cccCHHHHHHHHHHhhcCh
Confidence 00 000000000 000 0111123467888889999
Q ss_pred CCCCCCccCCCCCCCC
Q 002289 907 ETPPSSSSMLKHPYVS 922 (941)
Q Consensus 907 ~~R~sa~e~L~Hpwf~ 922 (941)
++||++.|+++||||.
T Consensus 276 ~~Rps~~~il~~~~~~ 291 (291)
T cd06639 276 EARPSVTHLLEHPFIK 291 (291)
T ss_pred hhCcCHHHHhcCcccC
Confidence 9999999999999984
No 323
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.4e-33 Score=304.85 Aligned_cols=199 Identities=28% Similarity=0.442 Sum_probs=174.0
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|+..+.||+|+||.||++..+ +++.||+|.+..... ...+++.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35778889999999999999976 689999998876432 3456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
+++++|.+++.... ..+++..+..++.|++.||+|||+ .+ ++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~- 155 (265)
T cd06605 81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL- 155 (265)
T ss_pred cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH-
Confidence 99999999997543 568899999999999999999999 88 9999999999999999999999999986542211
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 156 --------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred --------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 11156788999999999999999999999999999999999999654
No 324
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.9e-33 Score=303.40 Aligned_cols=203 Identities=32% Similarity=0.467 Sum_probs=174.5
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5888999999999999999964 6899999998765443 456889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+|+||+|+||++++++.+||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999999996543 4788899999999999999999999 999999999999999999999999998876433211
Q ss_pred CccccccccccccCCCcccccccccCC---CCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
. ........++..|+|||++.+.. ++.++||||||+++||+++|+.||...
T Consensus 156 ~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 156 M---GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred c---cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 0 11012345788999999998766 889999999999999999999999643
No 325
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=316.71 Aligned_cols=293 Identities=24% Similarity=0.320 Sum_probs=207.9
Q ss_pred hcCCCc-cceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh--------------hHhHHHHHHHHHhcCCCceeeee
Q 002289 608 TNNFNS-STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------------EKEFLTEIQFLSRLHHRNLVSLV 671 (941)
Q Consensus 608 ~~~y~~-~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~nIv~l~ 671 (941)
.++|.. .+.||+|+||+||+|... +++.||||.++...... ...+.+|++++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 356654 467999999999999965 68999999886532221 12477899999999999999999
Q ss_pred eccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEE
Q 002289 672 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 751 (941)
Q Consensus 672 ~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl 751 (941)
+++...+..++||||++ |+|.+++... ..+++.....++.|++.||+|||+.+ |+||||||+||+++.++.++|
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEE
Confidence 99999999999999996 6999998653 34888999999999999999999999 999999999999999999999
Q ss_pred eeeccccccCCCCCCCc-------cccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchh
Q 002289 752 ADFGLSRLAPVPDIEGI-------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNI 823 (941)
Q Consensus 752 ~DFGla~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~ 823 (941)
+|||+++.......... ..........++..|+|||.+.+. .++.++||||+||++|||++|+.||....+.
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999976542211000 001111233467889999998764 4688999999999999999999999765442
Q ss_pred HHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCC
Q 002289 824 VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHT 903 (941)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~ 903 (941)
... .... .... ..+...+.....+... ....+...+.. ....+.......+++.+||.
T Consensus 241 ~~~-~~i~------~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~ 298 (335)
T PTZ00024 241 DQL-GRIF------ELLG----TPNEDNWPQAKKLPLY-TEFTPRKPKDL----------KTIFPNASDDAIDLLQSLLK 298 (335)
T ss_pred HHH-HHHH------HHhC----CCchhhCcchhhcccc-cccCcCCcccH----------HHhCcCCChHHHHHHHHHcC
Confidence 211 1110 0000 0000000000000000 00001111111 11223344566789999999
Q ss_pred CCCCCCCCCccCCCCCCCCCCCCCC
Q 002289 904 SKEETPPSSSSMLKHPYVSSDVSGS 928 (941)
Q Consensus 904 ~dP~~R~sa~e~L~Hpwf~~~~~~~ 928 (941)
.+|++|+|++|+|.||||++.....
T Consensus 299 ~~P~~R~s~~~~l~~~~~~~~~~~~ 323 (335)
T PTZ00024 299 LNPLERISAKEALKHEYFKSDPLPC 323 (335)
T ss_pred CCchhccCHHHHhcCcccCCCCCCC
Confidence 9999999999999999998875543
No 326
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.9e-34 Score=319.09 Aligned_cols=289 Identities=25% Similarity=0.370 Sum_probs=212.1
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCC-----cEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 681 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~ 681 (941)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999975 58999999987643 334567899999999999999999999987765 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 682 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 682 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+||||++ ++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999996 58999886543 6899999999999999999999999 9999999999999999999999999998664
Q ss_pred CCCCCCccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
..... ........++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... ..... .
T Consensus 155 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~-~~~~i---------~ 220 (330)
T cd07834 155 PDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID-QLNLI---------V 220 (330)
T ss_pred ccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHH---------H
Confidence 33210 0112334578899999999887 78999999999999999999999997554321 11111 0
Q ss_pred cCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCC
Q 002289 841 DGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 919 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 919 (941)
...+..+.+..... ...+.......+..++ . .+....+.......+++.+||..+|++|||++++++||
T Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 221 -EVLGTPSEEDLKFITSEKARNYLKSLPKKPK-K--------PLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred -HhcCCCChhHhhhccccchhhHHhhcccCCc-c--------hhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 00111111111100 0000000000000000 0 01112233455667899999999999999999999999
Q ss_pred CCCCCCCCC
Q 002289 920 YVSSDVSGS 928 (941)
Q Consensus 920 wf~~~~~~~ 928 (941)
||++-...+
T Consensus 291 ~~~~~~~~~ 299 (330)
T cd07834 291 YLAQLHDPE 299 (330)
T ss_pred cHHhhcccc
Confidence 997755543
No 327
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.7e-33 Score=302.07 Aligned_cols=202 Identities=25% Similarity=0.423 Sum_probs=171.3
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeecccc--CCcEEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVY 684 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~LV~ 684 (941)
+|++.+.||+|+||.||++... +++.||+|+++... ....+.+.+|++++++++|+||+++++++.. ....++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999864 68899999987533 2334578899999999999999999998753 45679999
Q ss_pred ecCCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhh-----cCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 685 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLH-----TEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 685 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH-----~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
||+++++|.+++... ...++++..++.++.|++.||+||| +.+ ++|+||||+||+++.++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999998653 2456899999999999999999999 666 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
....... .......++..|+|||++.+..++.++||||||+++++|++|+.||....
T Consensus 158 ~~~~~~~-------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 214 (265)
T cd08217 158 KILGHDS-------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN 214 (265)
T ss_pred ccccCCc-------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence 8654321 11223458889999999999889999999999999999999999997543
No 328
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.8e-33 Score=303.33 Aligned_cols=251 Identities=20% Similarity=0.361 Sum_probs=201.0
Q ss_pred CCCccceeeccCcEEEEEEEeCC--CcEEEEEEeccCC----------chhhHhHHHHHHHHHh-cCCCceeeeeecccc
Q 002289 610 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS----------LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE 676 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~ 676 (941)
+|++.+.||+|+||.||+|.+.. ++.+|+|.+.... .....++.+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999764 6889999875321 1123456788888765 799999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhh--cCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEee
Q 002289 677 EGEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVAD 753 (941)
Q Consensus 677 ~~~~~LV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~D 753 (941)
.+..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||||+||++++++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998854 234468999999999999999999996 56 99999999999999999999999
Q ss_pred eccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhh
Q 002289 754 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 833 (941)
Q Consensus 754 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~ 833 (941)
||.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .....
T Consensus 158 fg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-~~~~~---- 224 (269)
T cd08528 158 FGLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-SLATK---- 224 (269)
T ss_pred ccceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-HHHHH----
Confidence 99997643221 223445888999999999988999999999999999999999999654321 11111
Q ss_pred ccchhhhcCCCCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 834 SMMFSVIDGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 834 ~~~~~~~~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
+......+.+ ..++..+.+++.+||+.+|++||++.++..+++
T Consensus 225 -----~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 225 -----IVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -----HhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111111212 245578899999999999999999999998764
No 329
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.2e-33 Score=304.71 Aligned_cols=255 Identities=29% Similarity=0.436 Sum_probs=199.5
Q ss_pred CCccceeeccCcEEEEEEEeC----CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCC------
Q 002289 611 FNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 678 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 678 (941)
|.+.+.||+|+||+||+|.+. +++.||||++.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999853 36889999987542 223457889999999999999999999875432
Q ss_pred cEEEEEecCCCCCHHHHHhhc----CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeee
Q 002289 679 EQMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 754 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DF 754 (941)
..++++||+++|+|.+++... ....+++...+.++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887532 2235788999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhh
Q 002289 755 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833 (941)
Q Consensus 755 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~ 833 (941)
|.++....... ........++..|++||.+.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-~~~~~---- 227 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-EIYNY---- 227 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-HHHHH----
Confidence 99986532211 011112235578999999998889999999999999999999 88888644321 11111
Q ss_pred ccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
+........+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 228 -----~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 -----LIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111112223345567899999999999999999999999999865
No 330
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=9.2e-34 Score=309.28 Aligned_cols=278 Identities=26% Similarity=0.395 Sum_probs=209.1
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
|++.+.||+|++|.||+|... +++.+++|.+...... ....+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999975 6899999998754332 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
+ ++|.+++.... ..+++..++.++.|+++||+|||+.+ |+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 81 D-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred C-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 6 58988886643 46899999999999999999999999 9999999999999999999999999987654321
Q ss_pred ccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......... ..... ..+.
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~-~~~~~----------~~~~ 217 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL-FKIFR----------TLGT 217 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHH----------HcCC
Confidence 111234577899999998876 7899999999999999999999999765543221 11110 0111
Q ss_pred CChHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 847 YPSECVEKFIKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~-RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
...+....+.+.+..+....|.. .....++. +..+....+||.+|+..||.+||+++|++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 218 PDPEVWPKFTSLARNYKFSFPKKAGMPLPKLF----------PNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred CchHhcccchhhhhhhhhhhccccccCHHHhh----------hhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 11122222222222221111211 11222111 2234556789999999999999999999999997
No 331
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.6e-33 Score=302.50 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=188.5
Q ss_pred eeeccCcEEEEEEEeCCC---cEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCC
Q 002289 616 QIGQGGYGKVYKGILPDG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 691 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 691 (941)
.||+|+||+||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||++++++|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985433 356677766433 2345689999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC--CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 692 LRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 692 L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|.+++++.. ....++..++.++.||++||+|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999997542 234677778899999999999999998 99999999999999999999999999864321110
Q ss_pred ccccccccccCCCccccccccc-------CCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
........++..|+|||++.. ..++.++|||||||++|||++ |..||...... +........ ......+
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~-~~~~~~~ 231 (268)
T cd05086 155 -IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-EVLNHVIKD-QQVKLFK 231 (268)
T ss_pred -hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhh-cccccCC
Confidence 011123457889999999753 245779999999999999997 56677544332 211111111 1111111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
+..+..+...+.+++..|| .+|++||++.++++.|
T Consensus 232 ---~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 232 ---PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred ---CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 2223345567888999999 6799999999998876
No 332
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.3e-33 Score=301.97 Aligned_cols=237 Identities=24% Similarity=0.410 Sum_probs=189.1
Q ss_pred ceeeccCcEEEEEEEeCC-C----------cEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 615 TQIGQGGYGKVYKGILPD-G----------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
+.||+|+||.||+|.+.+ + ..|++|.+...... ...+.+|+.+++.++|+||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 468999999999999754 3 25788877654333 5688999999999999999999999987 788999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-------cEEEeeecc
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-------TAKVADFGL 756 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-------~~kl~DFGl 756 (941)
|||+++|+|.+++..... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999976443 5889999999999999999999998 99999999999999888 799999999
Q ss_pred ccccCCCCCCCccccccccccccCCCcccccccccC--CCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhh
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 833 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~ 833 (941)
+..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||..... ..+.. .+.
T Consensus 155 a~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-~~~~~-~~~- 220 (259)
T cd05037 155 PITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-SEKER-FYQ- 220 (259)
T ss_pred cccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-hhHHH-HHh-
Confidence 875432 1123456789999999876 78999999999999999999 5777754432 11111 111
Q ss_pred ccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
.......+ ....+.+++.+||..+|.+||++.++++.|
T Consensus 221 -------~~~~~~~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 -------DQHRLPMP--DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -------cCCCCCCC--CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11111111 127888999999999999999999998865
No 333
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=7.5e-34 Score=306.43 Aligned_cols=254 Identities=24% Similarity=0.379 Sum_probs=197.7
Q ss_pred eeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
||+|+||.||+++.. +|+.||+|++..... ...+.+.+|++++++++|+||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 489999999875443 3346788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC-cccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG-IVPA 771 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~-~~~~ 771 (941)
.+++.+.. .+++..++.++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||++.......... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99997654 5899999999999999999999999 9999999999999999999999999987543221100 0001
Q ss_pred ccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHH
Q 002289 772 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 851 (941)
Q Consensus 772 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (941)
.......++..|+|||...+..++.++||||||+++||+++|+.||...... ....
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~~----------------------- 211 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-EIFQ----------------------- 211 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHH-----------------------
Confidence 1223445788999999999888999999999999999999999999643321 0000
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCC---ccCCCCCCCCC
Q 002289 852 VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS---SSMLKHPYVSS 923 (941)
Q Consensus 852 ~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa---~e~L~Hpwf~~ 923 (941)
.+. . ....+|... .......+|+.+|+..+|++|||+ .|+|+||||+.
T Consensus 212 -----~~~----~-~~~~~~~~~--------------~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 212 -----NIL----N-GKIEWPEDV--------------EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred -----HHh----c-CCcCCCccc--------------cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 000 0 000011100 012233468888899999999999 99999999975
No 334
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.8e-33 Score=303.80 Aligned_cols=203 Identities=32% Similarity=0.452 Sum_probs=172.2
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccCC------
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG------ 678 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~------ 678 (941)
.+++|++.+.||+|+||.||+|... +++.+++|++..... ..+.+.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4689999999999999999999975 678999999876433 346789999999999 7999999999986544
Q ss_pred cEEEEEecCCCCCHHHHHhhcC--CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGl 756 (941)
..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence 4899999999999999986533 456899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccccCCCccccccccc-----CCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
+....... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 160 SAQLDSTL-------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred ceecccch-------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 87543211 11233458889999998754 34678899999999999999999999643
No 335
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.6e-33 Score=302.81 Aligned_cols=200 Identities=28% Similarity=0.467 Sum_probs=173.0
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|+||.||+|..+ +|..||+|.+..... ...+.+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5788899999999999999975 588999999865322 2345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-cEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-~~kl~DFGla~~~~~~~~ 765 (941)
+++++|.+++.......+++..++.++.|+++||+|||+.+ ++|+||||+||++++++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99999999997765556899999999999999999999999 99999999999999885 56999999987653221
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
.......|+..|+|||+..+..++.++||||||++++||++|+.||..
T Consensus 157 ------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 204 (257)
T cd08225 157 ------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG 204 (257)
T ss_pred ------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 112234588899999999888899999999999999999999999864
No 336
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-33 Score=309.60 Aligned_cols=199 Identities=27% Similarity=0.359 Sum_probs=168.6
Q ss_pred CCCccceeeccCcEEEEEEEe----CCCcEEEEEEeccCCc----hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcE
Q 002289 610 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 680 (941)
+|++.+.||+|+||.||+|.. .+|+.||+|+++.... ...+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999986 3689999999875322 2235678899999999 599999999999988899
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||+++++|.+++.... .+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 99999999999999996543 4788899999999999999999999 999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccccCCCcccccccccC--CCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
..... .......|+..|+|||.+.+. .++.++||||||+++|||++|+.||..
T Consensus 156 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 156 HEDEV------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred ccccc------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 32211 112234578899999998753 467899999999999999999999853
No 337
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=8e-34 Score=309.13 Aligned_cols=258 Identities=22% Similarity=0.339 Sum_probs=203.4
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcC-CCceeeeeeccccCCcEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV 683 (941)
++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47888999999999999999975 78999999987532 223457889999999998 99999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||+++++|.+++.+.. .+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999997653 5899999999999999999999999 999999999999999999999999999866433
Q ss_pred CCCCcc-------------ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002289 764 DIEGIV-------------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 830 (941)
Q Consensus 764 ~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~ 830 (941)
...... .........++..|+|||...+..++.++||||||++++++++|+.||........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----- 230 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT----- 230 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-----
Confidence 211000 01122334578899999999888899999999999999999999999964432110
Q ss_pred HhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC
Q 002289 831 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 910 (941)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 910 (941)
+..+....+ ......++...+|+.+||..+|.+||
T Consensus 231 ------------------------~~~~~~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~R~ 265 (280)
T cd05581 231 ------------------------FQKILKLEY---------------------SFPPNFPPDAKDLIEKLLVLDPQDRL 265 (280)
T ss_pred ------------------------HHHHHhcCC---------------------CCCCccCHHHHHHHHHHhcCCHhhCC
Confidence 000000000 00011123345688888999999999
Q ss_pred CC----ccCCCCCCC
Q 002289 911 SS----SSMLKHPYV 921 (941)
Q Consensus 911 sa----~e~L~Hpwf 921 (941)
++ +|+++||||
T Consensus 266 ~~~~~~~~ll~~~~~ 280 (280)
T cd05581 266 GVNEGYDELKAHPFF 280 (280)
T ss_pred CcccCHHHHhcCCCC
Confidence 99 999999997
No 338
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.4e-33 Score=300.54 Aligned_cols=201 Identities=30% Similarity=0.429 Sum_probs=176.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
++|++.+.||+|++|.||+|+.. +++.||+|++..... ...+.+.+|++.+++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999976 589999999876544 3456899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
+++++|.+++... ..+++..++.++.|+++|++|||+ .+ ++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999754 458999999999999999999999 88 99999999999999999999999999876543221
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
......++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 156 -------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 156 -------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred -------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 1123457889999999999999999999999999999999999996543
No 339
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.8e-33 Score=302.02 Aligned_cols=202 Identities=27% Similarity=0.450 Sum_probs=170.1
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch----------hhHhHHHHHHHHHhcCCCceeeeeeccccCC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ----------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 678 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 678 (941)
+|.+.+.||+|+||.||+|... +|+.||+|.++..... ..+.+.+|+++++.++|+||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4777889999999999999864 6899999987532111 1235788999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999765 35888999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccccCCCcccccccccCC--CCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
....... ........|+..|+|||.+.... ++.++||||||+++||+++|..||....
T Consensus 157 ~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 216 (272)
T cd06629 157 KSDDIYD-----NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE 216 (272)
T ss_pred ccccccc-----ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc
Confidence 5432110 11123345788999999987654 7889999999999999999999996443
No 340
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.8e-34 Score=317.93 Aligned_cols=283 Identities=24% Similarity=0.375 Sum_probs=207.0
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC--CchhhHhHHHHHHHHHhcCCCceeeeeeccccC-----Cc
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 679 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 679 (941)
.++|.+.+.||+|+||+||+|+.. +++.||||.+... .....+.+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457899999999999999999964 6899999988753 222345678899999999999999999988543 35
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999995 7999988654 35899999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchh
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 838 (941)
..... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ....... .
T Consensus 158 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~------~ 223 (337)
T cd07858 158 TSEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLIT------E 223 (337)
T ss_pred cCCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHH------H
Confidence 53221 11233457889999998865 46889999999999999999999999654321 1111110 0
Q ss_pred hhcCCCCCCChHHHH-----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCc
Q 002289 839 VIDGNMGSYPSECVE-----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 913 (941)
Q Consensus 839 ~~~~~~~~~~~~~~~-----~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~ 913 (941)
.. +..+.+... ...+.+. ......++... ...+...+...+++++||+.||++|||++
T Consensus 224 ~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~Rps~~ 286 (337)
T cd07858 224 LL----GSPSEEDLGFIRNEKARRYIR---SLPYTPRQSFA----------RLFPHANPLAIDLLEKMLVFDPSKRITVE 286 (337)
T ss_pred Hh----CCCChHHhhhcCchhhhHHHH---hcCcccccCHH----------HHcccCCHHHHHHHHHHhcCChhhccCHH
Confidence 00 100110000 0000000 00011112221 11233455667899999999999999999
Q ss_pred cCCCCCCCCCCCCC
Q 002289 914 SMLKHPYVSSDVSG 927 (941)
Q Consensus 914 e~L~Hpwf~~~~~~ 927 (941)
|+++||||......
T Consensus 287 ell~h~~~~~~~~~ 300 (337)
T cd07858 287 EALAHPYLASLHDP 300 (337)
T ss_pred HHHcCcchhhhcCc
Confidence 99999999765443
No 341
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.6e-33 Score=305.76 Aligned_cols=200 Identities=26% Similarity=0.432 Sum_probs=174.9
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
++|.+.+.||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 68889999999999999999864 68899999987554455567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++++|.+++.+. .+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~--- 169 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccc---
Confidence 999999998643 3788899999999999999999999 9999999999999999999999999887543221
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......+++.|+|||.+.+..++.++||||||+++||+++|+.||....
T Consensus 170 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~ 219 (293)
T cd06647 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (293)
T ss_pred ----cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223458889999999988889999999999999999999999996543
No 342
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=344.35 Aligned_cols=254 Identities=26% Similarity=0.377 Sum_probs=208.0
Q ss_pred hcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
+-+++....||.|.||.||.|.. ++|...|+|-++.... ...+.+.+|+.++..++|||+|+++|+-.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 46677789999999999999994 5799999997764332 22456789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
|||++|+|.++++... ..++.....+..|++.|++|||++| ||||||||.||+++.+|.+|++|||.|.......
T Consensus 1314 EyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 9999999999996433 3677778889999999999999999 9999999999999999999999999998775431
Q ss_pred CCCccccccccccccCCCcccccccccC---CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 841 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 841 (941)
... ........||+.|||||++.+. ....+.||||+|||+.||+||+.||..-++ ....|+.+-.
T Consensus 1389 --~~~-~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---------e~aIMy~V~~ 1456 (1509)
T KOG4645|consen 1389 --QTM-PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---------EWAIMYHVAA 1456 (1509)
T ss_pred --hcC-CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---------hhHHHhHHhc
Confidence 111 1233467899999999999863 356689999999999999999999965433 1234566667
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 842 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 842 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
+..+++|+..+.+=.+.+..|+..||++|.++.|+++
T Consensus 1457 gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1457 GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 7777888887777778888888888888866665554
No 343
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=5.2e-33 Score=303.97 Aligned_cols=276 Identities=26% Similarity=0.380 Sum_probs=200.1
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhc---CCCceeeeeeccccCCc-----
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGE----- 679 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~----- 679 (941)
|++.+.||+|+||.||+|+.+ +++.||+|+++..... ....+.+|+.+++++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999976 4899999998743222 134566788777666 59999999999987766
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
.++||||++ ++|.+++.......+++..++.++.|+++||+|||+.+ ++|+||+|+||+++.++.+||+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 899999996 58999987655556899999999999999999999998 99999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhh
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 839 (941)
..... ......++..|+|||++.+..++.++|||||||++|||++|+.||..... .+...........
T Consensus 157 ~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~--- 224 (287)
T cd07838 157 YSFEM--------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGL--- 224 (287)
T ss_pred ccCCc--------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCC---
Confidence 53321 11223467899999999999999999999999999999999888865433 2222211110000
Q ss_pred hcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCC
Q 002289 840 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 919 (941)
Q Consensus 840 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hp 919 (941)
......+.. ......+....+ .+.+.++. +...+...+++.+||..||++||+++|++.||
T Consensus 225 --~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~ 285 (287)
T cd07838 225 --PSEEEWPRN-----VSLPRSSFPSYT--PRSFKSFV----------PEICEEGLDLLKKMLTFNPHKRISAFEALQHP 285 (287)
T ss_pred --CChHhcCCC-----cccchhhccccc--ccchhhhh----------hhhhHHHHHHHHHHhccCCccCCCHHHHhcCc
Confidence 000000000 000000010000 01111111 12234456899999999999999999999999
Q ss_pred CC
Q 002289 920 YV 921 (941)
Q Consensus 920 wf 921 (941)
||
T Consensus 286 ~~ 287 (287)
T cd07838 286 YF 287 (287)
T ss_pred CC
Confidence 98
No 344
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.9e-33 Score=306.29 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=189.4
Q ss_pred eeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHH---HHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 616 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQ---FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
.||+|+||.||+|... +++.||+|.+...... ....+..|.. .++...|++|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 6899999988653322 1223444443 4445579999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+|+|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK----- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCcc-----
Confidence 99999988654 35899999999999999999999998 999999999999999999999999998754321
Q ss_pred cccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
......|+..|+|||++.++ .++.++||||+||++|||++|+.||........
T Consensus 151 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~---------------------- 204 (278)
T cd05606 151 ----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---------------------- 204 (278)
T ss_pred ----CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch----------------------
Confidence 11233588999999999754 688999999999999999999999964321000
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC-----CCccCCCCCCCC
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKHPYVS 922 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~-----sa~e~L~Hpwf~ 922 (941)
....+... ..++.. .........+++.+||..+|++|+ ++.|+++||||.
T Consensus 205 -----~~~~~~~~-------~~~~~~-------------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~ 259 (278)
T cd05606 205 -----HEIDRMTL-------TMAVEL-------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFR 259 (278)
T ss_pred -----HHHHHHhh-------ccCCCC-------------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCcccc
Confidence 00000000 000000 011123345677788888888888 999999999998
Q ss_pred CCCCC
Q 002289 923 SDVSG 927 (941)
Q Consensus 923 ~~~~~ 927 (941)
...+.
T Consensus 260 ~~~~~ 264 (278)
T cd05606 260 SLDWQ 264 (278)
T ss_pred CCCch
Confidence 76543
No 345
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.5e-33 Score=301.46 Aligned_cols=246 Identities=26% Similarity=0.421 Sum_probs=191.2
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
-|+..+.||+|+||.||+|... +++.||+|....... ...+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4667889999999999999864 689999998764332 23457889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
++++|.+++... .+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06641 85 GGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch---
Confidence 999999998542 4789999999999999999999999 9999999999999999999999999987653221
Q ss_pred ccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 847 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (941)
.......++..|+|||.+.+..++.++|||||||++|||++|..||...... ..... +........
T Consensus 156 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~---------~~~~~~~~~ 221 (277)
T cd06641 156 ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-KVLFL---------IPKNNPPTL 221 (277)
T ss_pred ----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-HHHHH---------HhcCCCCCC
Confidence 1122345788999999999888999999999999999999999999643221 11110 111111222
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 848 PSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 848 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
+..++..+.+++.+|++.+|.+||++.++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 3334455555666666666666666555554
No 346
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=6.7e-34 Score=310.19 Aligned_cols=278 Identities=28% Similarity=0.423 Sum_probs=205.6
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|++++++++|+||+++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999975 58999999988643 222456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
+ ++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||+|+||++++++.++|+|||.++......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~--- 152 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPL--- 152 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCc---
Confidence 7 69999997653 35899999999999999999999999 9999999999999999999999999987653321
Q ss_pred ccccccccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||........ ...... ....
T Consensus 153 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~~~~----------~~~~ 217 (282)
T cd07829 153 ----RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-LFKIFQ----------ILGT 217 (282)
T ss_pred ----cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHH----------HhCC
Confidence 112223456789999998776 789999999999999999999999865443211 111100 0011
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
..+..+..+.++. -+.......+. . .....++..+....+++++||..||++||++++++.||||
T Consensus 218 ~~~~~~~~~~~~~--~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 218 PTEESWPGVTKLP--DYKPTFPKFPP-K-------DLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred CcHHHHHhhcccc--cccccccccCc-c-------chHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 1111111111110 00000000000 0 0011223335567889999999999999999999999998
No 347
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.8e-33 Score=314.53 Aligned_cols=281 Identities=22% Similarity=0.357 Sum_probs=206.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCC-----
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 678 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 678 (941)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++|+||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999854 78999999986432 222456889999999999999999999886543
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 679 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 679 -~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
..++||||+ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccc
Confidence 458999999 7899988853 35889999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
...... .....++..|+|||.+.+ ..++.++||||+||++|++++|+.||........... .
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~-~------ 228 (343)
T cd07880 166 RQTDSE----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLME-I------ 228 (343)
T ss_pred cccccC----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-H------
Confidence 754321 122356889999999876 4588899999999999999999999975543221111 1
Q ss_pred hhhhcCCCCCCChHHHHHHHHH-HHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccC
Q 002289 837 FSVIDGNMGSYPSECVEKFIKL-ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 915 (941)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~l~~l-~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~ 915 (941)
+.. ....+.++...+..- ...-...-|..++. + +....+...+...++|.+||..||++|+|+.++
T Consensus 229 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~ 295 (343)
T cd07880 229 ---MKV-TGTPSKEFVQKLQSEDAKNYVKKLPRFRKK--D-------FRSLLPNANPLAVNVLEKMLVLDAESRITAAEA 295 (343)
T ss_pred ---HHh-cCCCCHHHHHhhcchhHHHHHHhccccCcc--h-------HHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence 000 011122222221100 00000111111111 0 111223445567789999999999999999999
Q ss_pred CCCCCCCCC
Q 002289 916 LKHPYVSSD 924 (941)
Q Consensus 916 L~Hpwf~~~ 924 (941)
+.||||+..
T Consensus 296 l~~~~~~~~ 304 (343)
T cd07880 296 LAHPYFEEF 304 (343)
T ss_pred hcCccHhhh
Confidence 999999764
No 348
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.4e-33 Score=305.04 Aligned_cols=279 Identities=26% Similarity=0.381 Sum_probs=204.6
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcC-CCceeeeeeccccCCcEEEEEecC
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
|++.+.||+|+||+||+|+.. +++.||||++..... ..+....+|+..+++++ |+||+++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999975 578999999875432 22334567999999998 999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
+|+|.+++.......+++..++.++.|++.||.|||+++ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 889999987765456899999999999999999999998 9999999999999999999999999987553211
Q ss_pred ccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 846 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (941)
......++..|+|||++.+ ..++.++|+||||++++||++|+.||........ ..... .. .+.
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~-~~~~~------~~----~~~ 217 (283)
T cd07830 154 -----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ-LYKIC------SV----LGT 217 (283)
T ss_pred -----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH-HHHHH------Hh----cCC
Confidence 1123457889999998854 5578999999999999999999999865433211 11100 00 111
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC
Q 002289 847 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 921 (941)
Q Consensus 847 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf 921 (941)
...+.+..-..+.. .+...-..++.. . + ....+.......+|+++|++.||++|||++|++.||||
T Consensus 218 ~~~~~~~~~~~~~~-~~~~~~~~~~~~-~----~---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 218 PTKQDWPEGYKLAS-KLGFRFPQFAPT-S----L---HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred CChhhhhhHhhhhc-cccccccccccc-c----H---HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 11111111111110 111000000000 0 0 11222334556789999999999999999999999997
No 349
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-34 Score=283.80 Aligned_cols=248 Identities=24% Similarity=0.401 Sum_probs=198.3
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecC
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.+.+..||.|..|.||+++.+ +|..+|||.+.... .+..++++..+.++..- .+|+||+.+|||..+...++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 344667999999999999975 68999999987643 34457788888876665 4999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
.-.++.++. .-..++++...-++...+.+||.||.+++. |+|||+||+|||+|+.|++|++|||++-++...
T Consensus 174 -s~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS---- 245 (391)
T KOG0983|consen 174 -STCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGNIKLCDFGISGRLVDS---- 245 (391)
T ss_pred -HHHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEEccCCCEEeecccccceeecc----
Confidence 445555554 345569999999999999999999998764 999999999999999999999999999776432
Q ss_pred ccccccccccccCCCccccccccc---CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
...+...|.+.|||||.+.- ..|+-++||||||++++|+.||+.||.......+.+. .+.+...
T Consensus 246 ----kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~lt---------kvln~eP 312 (391)
T KOG0983|consen 246 ----KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLT---------KVLNEEP 312 (391)
T ss_pred ----cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHH---------HHHhcCC
Confidence 23345568899999999864 4688999999999999999999999986554333222 2333222
Q ss_pred CCC--ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 845 GSY--PSECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 845 ~~~--~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
+.. ...++..+.+++..|+.+|+.+||.+.+++++
T Consensus 313 P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 313 PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 222 23477889999999999999999999988754
No 350
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.9e-33 Score=301.61 Aligned_cols=198 Identities=29% Similarity=0.473 Sum_probs=170.5
Q ss_pred CCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcC---CCceeeeeeccccCCcEEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~LV~ 684 (941)
.|+..+.||+|+||.||+|.+ .+++.||+|.+..... ...+++.+|++++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999996 4789999999875432 33457889999999996 999999999999989999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998543 5889999999999999999999999 9999999999999999999999999998664322
Q ss_pred CCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 205 (277)
T cd06917 156 -------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV 205 (277)
T ss_pred -------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC
Confidence 11223458889999999875 45688999999999999999999999643
No 351
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.3e-33 Score=307.88 Aligned_cols=253 Identities=22% Similarity=0.380 Sum_probs=197.7
Q ss_pred cceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 614 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
..+||+|+||.||+|... +++.||+|.+..........+.+|+.+++.++|+||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 357999999999999874 7899999998654445566789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.+++... .+++.....++.|++.||+|||+.+ ++||||+|+||+++.++.++|+|||.+....... .
T Consensus 105 ~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-------~ 171 (292)
T cd06657 105 TDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-------P 171 (292)
T ss_pred HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc-------c
Confidence 9987432 4788999999999999999999998 9999999999999999999999999987543211 1
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHH
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 852 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (941)
......|+..|+|||.+.+..++.++||||+|+++|||++|+.||...... +...
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~-~~~~------------------------ 226 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMK------------------------ 226 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH------------------------
Confidence 123345788999999998888999999999999999999999998643321 1000
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCCC
Q 002289 853 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 853 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~ 926 (941)
.+..++.... + .....+....+++.+||..||.+|+++.+++.||||.....
T Consensus 227 -----~~~~~~~~~~---~--------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 227 -----MIRDNLPPKL---K--------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred -----HHHhhCCccc---C--------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 0000100000 0 00111222335777888888999999999999999876443
No 352
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.5e-33 Score=316.87 Aligned_cols=281 Identities=22% Similarity=0.351 Sum_probs=208.0
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeeccccCCc----
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE---- 679 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---- 679 (941)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++|+||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3578999999999999999999975 68899999886432 2234567889999999999999999998866554
Q ss_pred --EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccc
Q 002289 680 --QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 757 (941)
Q Consensus 680 --~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla 757 (941)
.++|+||+ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 6799999864 35899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 836 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 836 (941)
...... .....++..|+|||.+.+ ..++.++|||||||++||+++|+.||...... ..+....
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~----- 229 (343)
T cd07851 166 RHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIM----- 229 (343)
T ss_pred cccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-----
Confidence 754321 223357788999999865 46788999999999999999999999755432 2111111
Q ss_pred hhhhcCCCCCCChHHHHHHHHHH--HHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcc
Q 002289 837 FSVIDGNMGSYPSECVEKFIKLA--LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 914 (941)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~l~~l~--~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 914 (941)
+. .+..++.....+..-. ..+.......++...++ +...+..+.+|+++||..||++|||+.|
T Consensus 230 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~s~~l~dli~~~l~~~P~~Rpt~~e 294 (343)
T cd07851 230 ----NL-VGTPDEELLQKISSESARNYIQSLPQMPKKDFKEV----------FSGANPLAIDLLEKMLVLDPDKRITAAE 294 (343)
T ss_pred ----Hh-cCCCCHHHHhhccchhHHHHHHhccccCCCCHHHH----------hccCCHHHHHHHHHhCCCChhhCCCHHH
Confidence 00 1111222211111000 00000111112222221 1233556779999999999999999999
Q ss_pred CCCCCCCCCCC
Q 002289 915 MLKHPYVSSDV 925 (941)
Q Consensus 915 ~L~Hpwf~~~~ 925 (941)
+++||||..-.
T Consensus 295 ll~h~~~~~~~ 305 (343)
T cd07851 295 ALAHPYLAEYH 305 (343)
T ss_pred HhcCCCccccC
Confidence 99999997543
No 353
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.2e-33 Score=307.46 Aligned_cols=199 Identities=28% Similarity=0.351 Sum_probs=168.0
Q ss_pred CCCccceeeccCcEEEEEEEe----CCCcEEEEEEeccCCc----hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcE
Q 002289 610 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 680 (941)
+|++.+.||+|+||.||+++. .+++.||||+++.... ...+.+.+|+++++++ +|+||+++++.+...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999984 3578899999874322 2235678999999999 599999999999988999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998654 35888999999999999999999998 999999999999999999999999998765
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCC--CCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
.... ........|+..|+|||.+.+.. .+.++||||||+++|||++|..||..
T Consensus 156 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 156 LAEE------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred cccc------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 3321 11112345788999999987655 78899999999999999999999853
No 354
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.1e-33 Score=313.63 Aligned_cols=288 Identities=26% Similarity=0.400 Sum_probs=208.4
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC--CchhhHhHHHHHHHHHhc-CCCceeeeeeccccC--CcE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE--GEQ 680 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~--~~~ 680 (941)
..++|++.+.||+|+||.||+|.+. +++.||+|++... .......+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3567888999999999999999975 6889999987542 223345677899999999 999999999998543 367
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++||||++ ++|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999996 6999988653 5788999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhh
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 839 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~ 839 (941)
....... .........|+..|+|||++.+ ..++.++||||||+++|||++|+.||........ .....
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~-------- 226 (337)
T cd07852 158 SELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKII-------- 226 (337)
T ss_pred ccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH--------
Confidence 4322110 0112233468899999998865 5578899999999999999999999965443221 11110
Q ss_pred hcCCCCCCChHHHHHHH-HHHHHhcccCC-CCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCC
Q 002289 840 IDGNMGSYPSECVEKFI-KLALKCCQDET-DARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 917 (941)
Q Consensus 840 ~~~~~~~~~~~~~~~l~-~l~~~c~~~~p-~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 917 (941)
. ..+..+.+....+. .....++...+ ..++.+.+ ..+.......+++.+|++.||++|||+.++++
T Consensus 227 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 227 -E-VIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDE----------LLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred -H-HhCCCCHHHHHHHHhhhHHHhhhhcccccccchhh----------hccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 0 01111222222111 11111121111 11122211 12234455678999999999999999999999
Q ss_pred CCCCCCC
Q 002289 918 HPYVSSD 924 (941)
Q Consensus 918 Hpwf~~~ 924 (941)
||||..-
T Consensus 295 ~~~~~~~ 301 (337)
T cd07852 295 HPYVAQF 301 (337)
T ss_pred Chhhhhh
Confidence 9999664
No 355
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=5.2e-33 Score=299.63 Aligned_cols=248 Identities=23% Similarity=0.295 Sum_probs=190.0
Q ss_pred ceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---hHhHHHHHHH-HHhcCCCceeeeeeccccCCcEEEEEecCCC
Q 002289 615 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+.||+|+||.||+|... +++.||+|++....... ...+..|..+ ....+|+|++++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999974 68999999987543222 2234455544 3455899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
++|.+++.... .+++..+..++.|+++||.|||+.+ ++||||+|+||++++++.++|+|||+++....
T Consensus 82 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 82 GDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-------
Confidence 99999996543 4788899999999999999999998 99999999999999999999999999875321
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
.....++..|+|||.+.+..++.++||||||+++|||++|..||....... ...
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~--------------------- 203 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFD--------------------- 203 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHH---------------------
Confidence 122357789999999998889999999999999999999999996433211 000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCC---ccCCCCCCCCCC
Q 002289 850 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS---SSMLKHPYVSSD 924 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa---~e~L~Hpwf~~~ 924 (941)
.+....... .+. ..+.......+++.+||..+|++|++| +|+|.||||..-
T Consensus 204 -------~~~~~~~~~----~~~-------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 204 -------NILSRRINW----PEE-------------VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred -------HHHhcccCC----CCc-------------ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 000000000 000 001123344578888999999999977 599999999763
No 356
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.5e-32 Score=300.56 Aligned_cols=203 Identities=28% Similarity=0.437 Sum_probs=177.4
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
..+.|+..+.||+|+||.||+|.++ +++.|++|++..... ..+.+.+|+++++.++|+||+++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888899999999999999976 689999999876544 45678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
|+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+|+||+|+||+++.++.++|+|||.+.......
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 170 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK- 170 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence 999999999997654 36899999999999999999999998 9999999999999999999999999986543221
Q ss_pred CCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 171 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 171 ------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred ------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 11223457889999999998889999999999999999999999996544
No 357
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.8e-32 Score=303.28 Aligned_cols=245 Identities=29% Similarity=0.465 Sum_probs=187.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
..+|+..+.||+|+||+||+|... +++.||+|.+..... ...+++.+|+++++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888899999999999999965 689999998864322 2235688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
|||++ |++.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 94 MEYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HHhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 99996 68888775433 35899999999999999999999999 999999999999999999999999998754221
Q ss_pred CCCCccccccccccccCCCcccccccc---cCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
....++..|+|||++. ...++.++||||||+++|||++|+.||........... +.
T Consensus 169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~----------~~ 227 (307)
T cd06607 169 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----------IA 227 (307)
T ss_pred -----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH----------Hh
Confidence 1235778999999984 35688899999999999999999999975443221111 11
Q ss_pred cCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 841 DGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 841 ~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
...... .+..++..+.+++.+||..+|++||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 228 QNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred cCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 111111 12234445555555555555555555555543
No 358
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.8e-32 Score=301.24 Aligned_cols=264 Identities=14% Similarity=0.158 Sum_probs=188.1
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC----CcEEEEEEeccCCchh--h---------HhHHHHHHHHHhcCCCceeeeee
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQG--E---------KEFLTEIQFLSRLHHRNLVSLVG 672 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~--~---------~~~~~E~~~l~~l~h~nIv~l~~ 672 (941)
.++|++.++||+|+||+||+|...+ +..+|+|+........ + .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999999653 4567777643222111 1 11223344556678999999998
Q ss_pred ccccCC----cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc
Q 002289 673 YCDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 748 (941)
Q Consensus 673 ~~~~~~----~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~ 748 (941)
++.... ..++++|++ ..++.+.+.... ..++..+..++.|++.||+|||+.+ |+||||||+|||++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKL-VENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehh-ccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 765443 447888887 457777775432 3567888999999999999999998 999999999999999999
Q ss_pred EEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002289 749 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 828 (941)
Q Consensus 749 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~ 828 (941)
++|+|||+|+....................||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999986643211111111122334699999999999999999999999999999999999999975432111111
Q ss_pred HHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 829 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
... .+....+..+.. ....++..+.+++..|+..+|++||++.++.+.+
T Consensus 245 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAK-CDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhH-HHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 100 000111111111 1223457789999999999999999999998765
No 359
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.7e-33 Score=309.88 Aligned_cols=286 Identities=24% Similarity=0.365 Sum_probs=207.7
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcCCCceeeeeecccc-CC
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 678 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~ 678 (941)
++...+++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 44557889999999999999999999965 78999999875422 2234578899999999999999999998865 56
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
..++|+||+ +++|.+++... .+++.....++.|+++||+|||+.+ |+||||+|+||++++++.++|+|||.+.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcccccc
Confidence 789999999 67999888532 4778888899999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
..... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||............
T Consensus 157 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~-------- 218 (328)
T cd07856 157 IQDPQ----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSII-------- 218 (328)
T ss_pred ccCCC----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--------
Confidence 43211 122356788999999866 56899999999999999999999999654331111000
Q ss_pred hhhcCCCCCCChHHHHHHHH-HHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCC
Q 002289 838 SVIDGNMGSYPSECVEKFIK-LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 916 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~-l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L 916 (941)
....+..+++....+.. -....+...+...+.. .....+..+....+++.+||+.+|++|||++|++
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 219 ---TDLLGTPPDDVINTICSENTLRFVQSLPKREPVP---------FSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred ---HHHhCCCCHHHHHhccchhhHHHHhhccccCCCc---------HHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 00111122222111100 0000011111111100 0112233445667899999999999999999999
Q ss_pred CCCCCCCCC
Q 002289 917 KHPYVSSDV 925 (941)
Q Consensus 917 ~Hpwf~~~~ 925 (941)
.||||....
T Consensus 287 ~~~~~~~~~ 295 (328)
T cd07856 287 AHPYLAPYH 295 (328)
T ss_pred cCCcccccc
Confidence 999996543
No 360
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-34 Score=295.49 Aligned_cols=277 Identities=21% Similarity=0.353 Sum_probs=209.7
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHh---HHHHHHHHHhc-CCCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~---~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~L 682 (941)
..+|..+.+||+|+||.|.+|..+ +.+.+|||+++.+-....++ -..|-++|... +-|.++.++.+|+.-+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 456888999999999999999865 46789999998754333222 24566666655 57899999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
||||+.||+|-..++.-++ +.+..+..+|..||-||-+||+++ ||.||||.+||++|.+|.+||+|||+++.-
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn-- 500 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-- 500 (683)
T ss_pred EEEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc--
Confidence 9999999999998876554 778888999999999999999999 999999999999999999999999998742
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcC
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 842 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (941)
......+...+||+.|+|||.+..++|+..+|+|||||+||||+.|+.||+..+.. .++..+..
T Consensus 501 -----i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~-----------elF~aI~e 564 (683)
T KOG0696|consen 501 -----IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-----------ELFQAIME 564 (683)
T ss_pred -----ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH-----------HHHHHHHH
Confidence 23344556788999999999999999999999999999999999999999865431 12222222
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCC
Q 002289 843 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 922 (941)
Q Consensus 843 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~ 922 (941)
....+|...+.+...+....+.+.|..|--. -|+ ...++-.||||+
T Consensus 565 hnvsyPKslSkEAv~ickg~ltK~P~kRLGc-------------------------------g~~---ge~di~~H~FFR 610 (683)
T KOG0696|consen 565 HNVSYPKSLSKEAVAICKGLLTKHPGKRLGC-------------------------------GPE---GERDIREHPFFR 610 (683)
T ss_pred ccCcCcccccHHHHHHHHHHhhcCCccccCC-------------------------------CCc---cccchhhCcchh
Confidence 3334555555555555444444444444211 111 125677788888
Q ss_pred CCCCCCccccccccccCCC
Q 002289 923 SDVSGSNLVSGVIPTITPR 941 (941)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~ 941 (941)
.-.+..-=-.+.-||+.|+
T Consensus 611 ~iDWek~E~~eiqPPfkPk 629 (683)
T KOG0696|consen 611 RIDWEKLERREIQPPFKPK 629 (683)
T ss_pred hccHHHHhhccCCCCCCCc
Confidence 8666544445566777764
No 361
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.1e-33 Score=302.96 Aligned_cols=199 Identities=29% Similarity=0.410 Sum_probs=165.0
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcC-CCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|...+.||+|+||.||++... +++.||+|.+..... .....+.+|+.++.++. |+||+++++++..++..++||||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555678999999999999965 689999999875332 33567889999999996 99999999999988999999999
Q ss_pred CCCCCHHHHH---hhcCCCCccHHHHHHHHHHHHHHHHHhhcC-CCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 687 MSNGTLRDQL---SAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 687 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
++ +++.++. .......+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 85 5666543 233345689999999999999999999975 6 99999999999999999999999999975532
Q ss_pred CCCCCccccccccccccCCCcccccccccC---CCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.. ......|+..|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 161 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 161 SI--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred CC--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 21 11233578899999998876 6889999999999999999999999643
No 362
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-35 Score=291.46 Aligned_cols=283 Identities=24% Similarity=0.355 Sum_probs=215.4
Q ss_pred ccceeeccCcEEEEEEEeC-CCcEEEEEEecc--CCchhhHhHHHHHHHHHhcCCCceeeeeeccccC-----CcEEEEE
Q 002289 613 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQMLVY 684 (941)
Q Consensus 613 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~LV~ 684 (941)
-.+.||.|+||.||...+. +|+.||.|++.. .+....+.+.+|++++..++|.|++..++..... .+.|+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 3578999999999999975 799999998764 2334567899999999999999999998876543 3678899
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
|.|. .+|...+- ..+.++.+.++-+..||++||.|||+.+ |.||||||.|.|++++..+||+|||+|+..+..+
T Consensus 137 ELmQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhh
Confidence 9994 58877773 4567888899999999999999999999 9999999999999999999999999999765443
Q ss_pred CCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
...++...-|..|+|||.++| ..|+.+.||||.||++.|++.++..|..... .+++. ++..-
T Consensus 211 ------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P-iqQL~----------lItdL 273 (449)
T KOG0664|consen 211 ------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP-IEQLQ----------MIIDL 273 (449)
T ss_pred ------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh-HHHHH----------HHHHH
Confidence 344555667889999999998 4699999999999999999988877765433 22222 22222
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
++....+.+..-.+-++.-+-.-+.+-|+..-+.. |. .......+..+++..||.+||++|++..+++.|+|...
T Consensus 274 LGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYt-ls----S~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 274 LGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYK-IA----SPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred hCCCcHHHHHHHhhhhHHHhhccCCCCCCccceee-ec----CCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 34444454444444444444344445565543321 11 11123345577899999999999999999999999754
No 363
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.5e-32 Score=291.88 Aligned_cols=199 Identities=34% Similarity=0.515 Sum_probs=176.2
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
.|+..+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|+||+++++++...+..++|+||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4777899999999999999975 689999999987555456789999999999999999999999999899999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 999999986643 46899999999999999999999988 99999999999999999999999999876543210
Q ss_pred cccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.....++..|+|||.+.+..++.++||||||+++++|++|+.||...
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 23445788999999999888999999999999999999999999754
No 364
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.4e-32 Score=294.99 Aligned_cols=201 Identities=30% Similarity=0.514 Sum_probs=176.1
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|+||.||++.+. +++.||+|++..... ...+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999975 689999999876443 3456788999999999999999999999888999999999
Q ss_pred CCCCCHHHHHhhcC--CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 687 MSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 687 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
+++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 356899999999999999999999998 9999999999999999999999999997654321
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
.......|++.|+|||...+..++.++||||+|+++++|++|+.||...
T Consensus 158 -------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 206 (258)
T cd08215 158 -------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE 206 (258)
T ss_pred -------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC
Confidence 1122345788999999999888999999999999999999999998644
No 365
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.9e-32 Score=291.66 Aligned_cols=202 Identities=29% Similarity=0.449 Sum_probs=176.2
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccC--CcEEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 684 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~LV~ 684 (941)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|+||+++++.+... +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999976 689999999876543 3456789999999999999999999999887 8899999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+++++|.+++.... .+++..++.++.|+++||+|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999997654 6899999999999999999999998 9999999999999999999999999988664332
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.. .......++..|+|||.+.+..++.++||||||+++++|++|+.||....
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 10 01233457889999999998889999999999999999999999997544
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.2e-32 Score=308.07 Aligned_cols=281 Identities=24% Similarity=0.334 Sum_probs=200.8
Q ss_pred CCCccceeeccCcEEEEEEEeC-C--CcEEEEEEeccCC--chhhHhHHHHHHHHHhc-CCCceeeeeecccc----CCc
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-D--GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE----EGE 679 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~----~~~ 679 (941)
+|++.+.||+|+||.||++... + +..||+|++.... ....+.+.+|+++++++ +|+||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999964 4 7899999886422 22245678899999999 59999999987532 246
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
.++++||+. ++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 789999985 7999988543 35889999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchh
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 838 (941)
....... .........|+..|+|||++.+ ..++.++||||+||++|+|++|+.||...... ........
T Consensus 155 ~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~------ 224 (332)
T cd07857 155 FSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQ------ 224 (332)
T ss_pred ccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHH------
Confidence 5432211 1111233568899999998866 56899999999999999999999998654421 11111000
Q ss_pred hhcCCCCCCChHHHHHHHH----HHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcc
Q 002289 839 VIDGNMGSYPSECVEKFIK----LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 914 (941)
Q Consensus 839 ~~~~~~~~~~~~~~~~l~~----l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e 914 (941)
..+..+.+....+.. ....-.... .++.+. ...+..+....+|+.+||+.||++|||++|
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 288 (332)
T cd07857 225 ----VLGTPDEETLSRIGSPKAQNYIRSLPNI--PKKPFE----------SIFPNANPLALDLLEKLLAFDPTKRISVEE 288 (332)
T ss_pred ----HhCCCCHHHHHhhhhhhHHHHHHhcccc--CCcchH----------hhCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 011111111111100 000000000 011111 112333455678999999999999999999
Q ss_pred CCCCCCCC
Q 002289 915 MLKHPYVS 922 (941)
Q Consensus 915 ~L~Hpwf~ 922 (941)
++.||||.
T Consensus 289 ll~~~~~~ 296 (332)
T cd07857 289 ALEHPYLA 296 (332)
T ss_pred HhcChhhh
Confidence 99999995
No 367
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.4e-32 Score=294.09 Aligned_cols=203 Identities=29% Similarity=0.430 Sum_probs=170.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC-----CchhhHhHHHHHHHHHhcCCCceeeeeeccccC--CcE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 680 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 680 (941)
.+|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47889999999999999999964 6899999987532 122335788999999999999999999998654 457
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccccc
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~ 760 (941)
++|+||+++++|.+++.... .+++...+.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 89999999999999986543 3788889999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 761 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
...... ........++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 157 QTICMS----GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred cccccc----CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 321110 11112345888999999999988999999999999999999999999643
No 368
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.7e-32 Score=292.95 Aligned_cols=246 Identities=25% Similarity=0.418 Sum_probs=194.3
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|+||.||+++.. +++.+|+|.+..... ....++.+|+++++.++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 5788999999999999999865 688999999875332 2345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 687 MSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 687 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
+++++|.+++.+. ....+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998652 2346899999999999999999999999 999999999999999999999999999765432
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
......++..|+|||.+.+..++.++|+||+|+++|||++|+.||...... + ... .+.....
T Consensus 157 --------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~-~~~--------~~~~~~~ 218 (256)
T cd08530 157 --------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-D-LRY--------KVQRGKY 218 (256)
T ss_pred --------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-H-HHH--------HHhcCCC
Confidence 112234788999999999999999999999999999999999999654321 1 110 1111222
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~ 877 (941)
+..+..+...+.+++.+|+..+|++||++.+++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 251 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKIL 251 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 333444555566666666666666666665554
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=286.14 Aligned_cols=246 Identities=25% Similarity=0.388 Sum_probs=199.0
Q ss_pred cceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc-hhhHhHHHHHHH-HHhcCCCceeeeeeccccCCcEEEEEecCCCC
Q 002289 614 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
...||.|+||+|+|-.++ .|+..|||++..... ...++++.|.+. ++.-++||||+++|.+..++..|+.||.| ..
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DI 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hh
Confidence 457999999999998865 799999999987655 446788999885 55568999999999999999999999999 56
Q ss_pred CHHHHHh---hcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCC
Q 002289 691 TLRDQLS---AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 767 (941)
Q Consensus 691 sL~~~l~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 767 (941)
||+.+.. ......+++...-+|+...++||.||.+..+ |||||+||+|||++..|.+||+|||++-.+..
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~----- 220 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLVD----- 220 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHHH-----
Confidence 8766543 3344568888899999999999999997654 99999999999999999999999999875532
Q ss_pred ccccccccccccCCCccccccccc--CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCC
Q 002289 768 IVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 845 (941)
Q Consensus 768 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (941)
+-..+.-.|...|||||.+.. ..|+-+|||||+|++|||+.||+.|+....+..+++.... .+..+
T Consensus 221 ---SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv---------~gdpp 288 (361)
T KOG1006|consen 221 ---SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV---------IGDPP 288 (361)
T ss_pred ---HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH---------cCCCC
Confidence 223345568889999999964 4589999999999999999999999987777665554432 22222
Q ss_pred --CCChH---HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 846 --SYPSE---CVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 846 --~~~~~---~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
..+.+ +...+...+..|+.++-..||++.++.++
T Consensus 289 ~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 289 ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 23333 66788899999999999999999988754
No 370
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=302.24 Aligned_cols=276 Identities=24% Similarity=0.376 Sum_probs=212.7
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccC-Cchh------hHhHHHHHHHHHhcCCCceeeeeecc
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQG------EKEFLTEIQFLSRLHHRNLVSLVGYC 674 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~-~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~ 674 (941)
|-....++|-.++.||+|||+.||+|.+ ...+.||||+-... +... .+...+|.++-+.+.||.||++|+||
T Consensus 457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf 536 (775)
T KOG1151|consen 457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF 536 (775)
T ss_pred cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence 3344567888899999999999999995 46789999975432 1222 24567899999999999999999999
Q ss_pred c-cCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc---CCCcEE
Q 002289 675 D-EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAK 750 (941)
Q Consensus 675 ~-~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~---~~~~~k 750 (941)
. +.+.+|-|+|||+|.+|+-+|+.+. .+++.+++.|+.||+.||.||.+. ++||||-||||.|||+. .-|.+|
T Consensus 537 slDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 537 SLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred eeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeE
Confidence 5 5578899999999999999996543 489999999999999999999987 48899999999999995 357899
Q ss_pred EeeeccccccCCCCCCCccccccccccccCCCcccccccccC----CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHH
Q 002289 751 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 826 (941)
Q Consensus 751 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~ 826 (941)
|+|||+++.+.............+....||.+|++||.+.-+ +.+.|+||||+||++|..+.|+.||.+.....+.
T Consensus 614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI 693 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI 693 (775)
T ss_pred eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH
Confidence 999999998876654433334455567899999999998643 5788999999999999999999999765442221
Q ss_pred HHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCC
Q 002289 827 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE 906 (941)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP 906 (941)
+.. .. ++...-..| ..-|....++.+||++||.+.-
T Consensus 694 Lqe----NT---IlkAtEVqF-------------------------------------P~KPvVsseAkaFIRRCLaYRK 729 (775)
T KOG1151|consen 694 LQE----NT---ILKATEVQF-------------------------------------PPKPVVSSEAKAFIRRCLAYRK 729 (775)
T ss_pred Hhh----hc---hhcceeccC-------------------------------------CCCCccCHHHHHHHHHHHHhhh
Confidence 111 00 111000011 1112334556689999999999
Q ss_pred CCCCCCccCCCCCCCCCCC
Q 002289 907 ETPPSSSSMLKHPYVSSDV 925 (941)
Q Consensus 907 ~~R~sa~e~L~Hpwf~~~~ 925 (941)
++|+.+.++-.||||.--+
T Consensus 730 eDR~DV~qLA~dpyllPh~ 748 (775)
T KOG1151|consen 730 EDRIDVQQLACDPYLLPHI 748 (775)
T ss_pred hhhhhHHHHccCccccchh
Confidence 9999999999999985433
No 371
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.2e-32 Score=290.96 Aligned_cols=200 Identities=32% Similarity=0.521 Sum_probs=175.2
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|++.+.||+|++|.||+|+.. +++.|++|.+..... ...+.+.+|++++++++|+|++++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 5788899999999999999865 678999999886544 3446789999999999999999999999988999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 9999999999665 45899999999999999999999999 99999999999999999999999999986643221
Q ss_pred CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
......++..|+|||...+..++.++||||+|+++|+|++|+.||....
T Consensus 155 ------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~ 203 (254)
T cd06627 155 ------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN 203 (254)
T ss_pred ------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc
Confidence 1233457889999999988888999999999999999999999996543
No 372
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-33 Score=309.61 Aligned_cols=262 Identities=24% Similarity=0.358 Sum_probs=209.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch--hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
...|.+...||+|.|+.|..|+.. ++..||+|.+.+.... ....+.+|+++|+.++|||||+++.+...+...|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 467888999999999999999964 6999999999865433 2345889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+.+|.+.+++.++++ ..+..+..++.|+.+|++|||+++ |||||||++|||++.+.++||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-- 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY-- 207 (596)
T ss_pred EeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc--
Confidence 99999999999987765 445788889999999999999999 99999999999999999999999999987753
Q ss_pred CCCccccccccccccCCCcccccccccCCC-CchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
.......+|++.|.|||++.+.+| ++.+|+||+|+++|.|+.|..||+...-. . .-..++.+.
T Consensus 208 ------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-~---------Lr~rvl~gk 271 (596)
T KOG0586|consen 208 ------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-E---------LRPRVLRGK 271 (596)
T ss_pred ------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc-c---------ccchheeee
Confidence 234556789999999999999776 46899999999999999999999753210 0 000000000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
+ ...--...+..++|+++|..+|.+|++.+++++|+|...
T Consensus 272 ~----------------------------------------rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 272 Y----------------------------------------RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred e----------------------------------------cccceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 0 000111233446888888999999999999999999866
Q ss_pred CCCCCcccc
Q 002289 924 DVSGSNLVS 932 (941)
Q Consensus 924 ~~~~~~~~~ 932 (941)
.-....+.+
T Consensus 312 ~~~~~~l~p 320 (596)
T KOG0586|consen 312 LLEARLLAP 320 (596)
T ss_pred hhhhhhhhc
Confidence 544433333
No 373
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=8.9e-32 Score=299.03 Aligned_cols=245 Identities=29% Similarity=0.469 Sum_probs=192.8
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
|+..+.||+|+||.||+|+.. ++..||+|.+..... ...+.+.+|++++++++|+|++++++++...+..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666789999999999999964 689999999864322 2235688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
++ |+|.+.+... ..++++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++.....
T Consensus 107 ~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 107 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 96 5888877543 345899999999999999999999999 99999999999999999999999999865322
Q ss_pred CccccccccccccCCCcccccccc---cCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
.....|+..|+|||++. .+.++.++|||||||++|||++|+.||.......... .+....
T Consensus 178 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~----------~~~~~~ 240 (317)
T cd06635 178 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----------HIAQNE 240 (317)
T ss_pred -------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH----------HHHhcc
Confidence 12235788999999974 4568889999999999999999999987543221111 111111
Q ss_pred CC-CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002289 844 MG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 881 (941)
Q Consensus 844 ~~-~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 881 (941)
.. .....++..+.+++.+|++.+|.+||++.+++++.-
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 241 SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 11 122345566777888888888888888877776543
No 374
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.3e-32 Score=298.50 Aligned_cols=199 Identities=29% Similarity=0.457 Sum_probs=165.7
Q ss_pred hcCCCccceeeccCcEEEEEEEeCC-CcEEEEEEeccCCc-hhhHhHHHHHHHHHhcC-CCceeeeeeccccCCcEEEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~ 684 (941)
.++|++.+.||+|+||.||+|.+++ ++.||||.++.... .....+.+|+.++.+.. |+||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4668889999999999999999864 89999999875432 23456777887776664 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 763 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~ 763 (941)
||+ ++++.+++.... ..+++..+..++.|+++||+|||+ .+ |+||||+|+||++++++.+||+|||++......
T Consensus 94 e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred ecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 998 458887775533 368999999999999999999997 46 999999999999999999999999998765321
Q ss_pred CCCCccccccccccccCCCcccccccccCC----CCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 764 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 764 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
. ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||..
T Consensus 169 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 169 K--------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred C--------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence 1 112234778999999987654 78899999999999999999999964
No 375
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-32 Score=325.62 Aligned_cols=264 Identities=28% Similarity=0.486 Sum_probs=217.7
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEeC----C----CcEEEEEEeccCCch-hhHhHHHHHHHHHhc-CCCceeeeee
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGILP----D----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSLVG 672 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~----~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~ 672 (941)
.++...++..+.+.||+|.||.||+|... . ...||||.++..... ..+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 45666667777789999999999999842 1 457999999865443 356899999999998 6999999999
Q ss_pred ccccCCcEEEEEecCCCCCHHHHHhhcC------------C--CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCC
Q 002289 673 YCDEEGEQMLVYEFMSNGTLRDQLSAKS------------K--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 738 (941)
Q Consensus 673 ~~~~~~~~~LV~e~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp 738 (941)
+|...+..++|+||++.|+|.++++... . ..+.....+.++.|||.|++||++.. +|||||.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhh
Confidence 9999999999999999999999997654 0 23888999999999999999999998 99999999
Q ss_pred CcEEEcCCCcEEEeeeccccccCCCCCCCcccccccccccc--CCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCC
Q 002289 739 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG--TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 815 (941)
Q Consensus 739 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~ 815 (941)
+|||+.++..+||+|||+|+.....+.+. .....| ...|||||.+....|+.++||||||++||||+| |..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~------~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYR------TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceE------ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 99999999999999999998654433221 011112 345999999999999999999999999999999 888
Q ss_pred CCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 816 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 816 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
||.......+ .+..+.++.+...|..|..+++.+|+.||+.+|++||++.++.+.++...
T Consensus 521 PYp~~~~~~~---------l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 521 PYPGIPPTEE---------LLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCcHHH---------HHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 9875221111 11134556667789999999999999999999999999999999998854
No 376
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.4e-33 Score=274.02 Aligned_cols=280 Identities=16% Similarity=0.330 Sum_probs=209.3
Q ss_pred HhcCCCccceeeccCcEEEEEEE-eCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcC-CCceeeeeeccccC--CcEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQML 682 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~L 682 (941)
..++|++.+++|+|.|+.||.|. ..+.+.++||+++.. ..+.+.+|+++|+.+. ||||+++++...+. ....|
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 35789999999999999999998 457889999999853 3457899999999996 99999999998654 46689
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-CcEEEeeeccccccC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLAP 761 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~-~~~kl~DFGla~~~~ 761 (941)
|+||+.+.+...+.. .++...+..++.+++.||.|+|++| |+|||+||.|+++|.. -.++|+|+|+|.++.
T Consensus 113 iFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred HhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcC
Confidence 999999988877652 3667778899999999999999999 9999999999999965 479999999999875
Q ss_pred CCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
... .......+..|.-||.+.. ..|+..-|+|||||++.+|+..+.||+.+.+-.+++-..... +
T Consensus 185 p~~--------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV------L 250 (338)
T KOG0668|consen 185 PGK--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV------L 250 (338)
T ss_pred CCc--------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH------h
Confidence 432 2223345667889999876 568899999999999999999999999877655444322111 0
Q ss_pred cCCCCCCChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHH-H-hHhhCCC-----CCCCCcccccccCCCCCCCCCCC
Q 002289 841 DGNMGSYPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELE-S-IWNMMPE-----SDTKTPEFINSEHTSKEETPPSS 912 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~-~~c~~~~p~~RPs~~~v~~~L~-~-~~~~~~~-----~~~~~~dll~~~L~~dP~~R~sa 912 (941)
+ .+ ++..-+ +.-+..+ |.+.+++..-. . +...... ..+++.||+.++|++|-.+|+||
T Consensus 251 ----G--t~----el~~Yl~KY~i~Ld----p~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTa 316 (338)
T KOG0668|consen 251 ----G--TD----ELYAYLNKYQIDLD----PQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTA 316 (338)
T ss_pred ----C--hH----HHHHHHHHHccCCC----hhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccch
Confidence 0 00 111111 1111111 33344332211 1 1111111 23677899999999999999999
Q ss_pred ccCCCCCCCCCCC
Q 002289 913 SSMLKHPYVSSDV 925 (941)
Q Consensus 913 ~e~L~Hpwf~~~~ 925 (941)
+||+.||||....
T Consensus 317 kEam~HpyF~~~~ 329 (338)
T KOG0668|consen 317 KEAMAHPYFAPVR 329 (338)
T ss_pred HHHhcCchHHHHH
Confidence 9999999997543
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.3e-32 Score=330.90 Aligned_cols=145 Identities=25% Similarity=0.373 Sum_probs=130.7
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
++|.+.++||+|+||+||+|.+. +++.||||+++..... ....+.+|+.+++.++|+||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999976 6899999998754322 2357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
||+++++|.+++.... .+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999996543 4788899999999999999999998 9999999999999999999999999986
No 378
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=286.80 Aligned_cols=282 Identities=23% Similarity=0.321 Sum_probs=217.0
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccC--CchhhHhHHHHHHHHHhcCCCceeeeeeccccC------C
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 678 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 678 (941)
..+|.-...+|.|.- .|..|.+. .++.||+|+.... .....++..+|..++..++|+||++++.+|... .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777788899987 66666654 5899999987543 233456788999999999999999999998543 3
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
+.|+||||| .++|...++ ..++-.+...|..|++.|+.|||+.+ |+||||||+||++..++.+||.|||+|+
T Consensus 95 e~y~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred hHHHHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence 679999999 679999886 23677888999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchh
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 838 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~ 838 (941)
.... .-..+....|..|+|||++.+..+.+.+||||+||++.||++|+..|.+.....+|.+..
T Consensus 167 ~e~~--------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~-------- 230 (369)
T KOG0665|consen 167 TEDT--------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKII-------- 230 (369)
T ss_pred ccCc--------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHH--------
Confidence 5432 224556778899999999999889999999999999999999999998666665555432
Q ss_pred hhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh-hC-------CCCCCCCcccccccCCCCCCCCC
Q 002289 839 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MM-------PESDTKTPEFINSEHTSKEETPP 910 (941)
Q Consensus 839 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~-~~-------~~~~~~~~dll~~~L~~dP~~R~ 910 (941)
..++...+.+..++...+..-.. .||.... ...-+.+-+ .+ +.....+.|++.+||..||++|.
T Consensus 231 ---~~lgtpd~~F~~qL~~~~r~yv~----~~~~y~~-~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ri 302 (369)
T KOG0665|consen 231 ---EQLGTPDPSFMKQLQPTVRNYVE----NRPQYQA-ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRI 302 (369)
T ss_pred ---HHhcCCCHHHHHHhhHHHHHHhh----cChHhhc-cchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcc
Confidence 22344556677777666655544 3333322 111111100 00 11223457799999999999999
Q ss_pred CCccCCCCCCCC
Q 002289 911 SSSSMLKHPYVS 922 (941)
Q Consensus 911 sa~e~L~Hpwf~ 922 (941)
|++++|.|||++
T Consensus 303 sv~daL~HPY~~ 314 (369)
T KOG0665|consen 303 SVDDALRHPYIK 314 (369)
T ss_pred cHHHHhcCCeee
Confidence 999999999997
No 379
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.7e-32 Score=315.26 Aligned_cols=271 Identities=20% Similarity=0.311 Sum_probs=186.9
Q ss_pred HhcCCCccceeeccCcEEEEEEEe-----------------CCCcEEEEEEeccCCchhhHh--------------HHHH
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGIL-----------------PDGTVVAVKRAQEGSLQGEKE--------------FLTE 655 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 655 (941)
..++|++.++||+|+||+||+|.. .+++.||||+++.......++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235689999987543222222 3446
Q ss_pred HHHHHhcCCCce-----eeeeecccc--------CCcEEEEEecCCCCCHHHHHhhcC----------------------
Q 002289 656 IQFLSRLHHRNL-----VSLVGYCDE--------EGEQMLVYEFMSNGTLRDQLSAKS---------------------- 700 (941)
Q Consensus 656 ~~~l~~l~h~nI-----v~l~~~~~~--------~~~~~LV~e~~~~gsL~~~l~~~~---------------------- 700 (941)
+.++.+++|.++ ++++++|.. .+..+|||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776654 677887743 357899999999999999987421
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccC
Q 002289 701 KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 780 (941)
Q Consensus 701 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt 780 (941)
...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ........+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~------~~~~~~g~~t 373 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI------NFNPLYGMLD 373 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCC------ccCccccCCC
Confidence 113467788899999999999999998 9999999999999999999999999997543211 0111122347
Q ss_pred CCcccccccccCCC----------------------CchhHhHHHHHHHHHHHhCCC-CCCCCchhHHHHHHHHhhccch
Q 002289 781 PGYLDPEYFLTHKL----------------------TDKSDVYSLGVVFLELLTGMQ-PISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 781 ~~y~aPE~~~~~~~----------------------~~~sDVwSlG~ll~elltG~~-Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
+.|+|||.+..... ..+.||||+||+++||++|.. ||............
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-------- 445 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-------- 445 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh--------
Confidence 89999998764321 124799999999999999875 66432111110000
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCC---CCCCCCcc
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE---ETPPSSSS 914 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP---~~R~sa~e 914 (941)
. ...... |......+..+. .+...++...||+.+||..+| .+|+||+|
T Consensus 446 ---------~-~~~~~~--------~r~~~~~~~~~~-----------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~e 496 (507)
T PLN03224 446 ---------Y-DNDLNR--------WRMYKGQKYDFS-----------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQ 496 (507)
T ss_pred ---------c-cchHHH--------HHhhcccCCCcc-----------cccccChHHHHHHHHHhccCCCCcccCCCHHH
Confidence 0 000000 111111111111 122334566789999999766 68999999
Q ss_pred CCCCCCCCC
Q 002289 915 MLKHPYVSS 923 (941)
Q Consensus 915 ~L~Hpwf~~ 923 (941)
+|+||||..
T Consensus 497 aL~Hp~f~~ 505 (507)
T PLN03224 497 ALSHRFFLP 505 (507)
T ss_pred HhCCCCcCC
Confidence 999999964
No 380
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-33 Score=310.35 Aligned_cols=247 Identities=21% Similarity=0.281 Sum_probs=197.3
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEe
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
++.|.....+|.|+|+.|-.+... +++..+||++... ..+..+|+.++... +||||+++++.+.+..+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 456777778999999999998854 6889999998764 22345677665555 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE-cCCCcEEEeeeccccccCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-DHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl-~~~~~~kl~DFGla~~~~~~~ 764 (941)
.+.++-+.+.+..... +. ..+..|+.+|+.|+.|||++| ||||||||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 9999988887754432 23 677789999999999999999 9999999999999 68999999999999865432
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
....+-|..|.|||+.....|++++|+||||++||+|++|+.||....+-.
T Consensus 470 ---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-------------------- 520 (612)
T KOG0603|consen 470 ---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-------------------- 520 (612)
T ss_pred ---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH--------------------
Confidence 223345779999999999999999999999999999999999996433210
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCC-CC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV-SS 923 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf-~~ 923 (941)
-+..|+ .+|++. ......++|||++||++||++|+++.|++.|||| +.
T Consensus 521 -------------ei~~~i-----~~~~~s-------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~ 569 (612)
T KOG0603|consen 521 -------------EIHTRI-----QMPKFS-------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSH 569 (612)
T ss_pred -------------HHHHhh-----cCCccc-------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcC
Confidence 011111 123332 2234566799999999999999999999999999 44
Q ss_pred CC
Q 002289 924 DV 925 (941)
Q Consensus 924 ~~ 925 (941)
+.
T Consensus 570 ~t 571 (612)
T KOG0603|consen 570 PT 571 (612)
T ss_pred CC
Confidence 44
No 381
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.8e-32 Score=293.24 Aligned_cols=192 Identities=31% Similarity=0.429 Sum_probs=167.5
Q ss_pred eeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCH
Q 002289 617 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
||+|+||.||++... +++.||+|++...... ....+..|++++++++|+||+++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999975 5899999998754332 345788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 772 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 772 (941)
.+++.... .+++..+..++.|+++|+.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-------~ 148 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-------S 148 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC-------C
Confidence 99996553 4889999999999999999999988 9999999999999999999999999987653321 1
Q ss_pred cccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 773 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 773 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
......++..|+|||...+..++.++|+||||+++||+++|+.||...
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~ 196 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE 196 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 123445788999999999888899999999999999999999999644
No 382
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=2.3e-32 Score=284.16 Aligned_cols=268 Identities=24% Similarity=0.336 Sum_probs=223.3
Q ss_pred hHHHHHHhcCCCccceeeccCcEEEEEEEeCC------CcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeec
Q 002289 601 YGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGY 673 (941)
Q Consensus 601 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~ 673 (941)
..++....++++....+-+|.||.||.|.|.+ .+.|.||.++....+ ....+..|.-.+..+.|||+..+.+.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 45777788899999999999999999997643 356778887764433 34578889999999999999999999
Q ss_pred ccc-CCcEEEEEecCCCCCHHHHHhh------cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC
Q 002289 674 CDE-EGEQMLVYEFMSNGTLRDQLSA------KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 746 (941)
Q Consensus 674 ~~~-~~~~~LV~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~ 746 (941)
+.+ .+..+++|.++.-|+|..++.. ...+.++..+...++.|++.|++|||+++ |||.||.++|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 854 4577899999999999999971 33456788888999999999999999999 9999999999999999
Q ss_pred CcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHH
Q 002289 747 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 825 (941)
Q Consensus 747 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~ 825 (941)
.++||+|=.+++.+-..++. ...........||+||.+....|+.++||||||+++|||+| |+.|+...+...
T Consensus 433 LqVkltDsaLSRDLFP~DYh-----cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE- 506 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYH-----CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE- 506 (563)
T ss_pred eeEEeccchhccccCccccc-----ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-
Confidence 99999999999987655532 11223345678999999999999999999999999999999 999997544321
Q ss_pred HHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 826 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
....+.|+.+...|-.|+++++.+|.-||...|++||++++++.-|.++..+
T Consensus 507 ---------m~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 507 ---------MEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred ---------HHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 1223567777788999999999999999999999999999999999887654
No 383
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=8.7e-32 Score=290.06 Aligned_cols=199 Identities=26% Similarity=0.366 Sum_probs=165.4
Q ss_pred CCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-----chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 683 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 683 (941)
+|.+.+.||+|+||.||++.+. .+..+++|+++... ......+..|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5888999999999999999865 34556666655321 12234577899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhh--cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 684 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
|||+++++|.+++.. .....+++..++.++.|+++||.|||+.+ ++|+||||+||++++ +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998864 23356899999999999999999999999 999999999999975 569999999987653
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
... .......|+..|+|||...+..++.++|+||||+++|+|++|..||..
T Consensus 157 ~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~ 207 (260)
T cd08222 157 GSC-------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG 207 (260)
T ss_pred CCc-------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 221 112234578899999999888889999999999999999999999864
No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.98 E-value=4.2e-32 Score=288.47 Aligned_cols=179 Identities=23% Similarity=0.214 Sum_probs=152.8
Q ss_pred cCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCHHHHHhh
Q 002289 620 GGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA 698 (941)
Q Consensus 620 G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~ 698 (941)
|.||.||++.+. +++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999975 68999999987532 234455555566799999999999999999999999999999999865
Q ss_pred cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccc
Q 002289 699 KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778 (941)
Q Consensus 699 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 778 (941)
.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++|||.+...... .....
T Consensus 79 ~~--~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------~~~~~ 143 (237)
T cd05576 79 FL--NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------CDGEA 143 (237)
T ss_pred hc--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc----------cccCC
Confidence 43 4889999999999999999999998 999999999999999999999999987654321 11233
Q ss_pred cCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCC
Q 002289 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818 (941)
Q Consensus 779 gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~ 818 (941)
++..|+|||.+.+..++.++||||+|+++|||++|+.|+.
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 5668999999988889999999999999999999987764
No 385
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.98 E-value=2.5e-32 Score=322.35 Aligned_cols=277 Identities=23% Similarity=0.315 Sum_probs=178.3
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-C----CcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeec------cc
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-D----GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY------CD 675 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~------~~ 675 (941)
..++|++.+.||+|+||.||+|++. + +..||||++...... +....| .++...+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999975 4 689999987642211 111111 1222222333322222 24
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcCCC------------------CccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 002289 676 EEGEQMLVYEFMSNGTLRDQLSAKSKE------------------PLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIK 737 (941)
Q Consensus 676 ~~~~~~LV~e~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLk 737 (941)
.....++||||+++++|.++++..... ......+..++.|++.||+|||+++ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 556899999999999999998653211 1123445679999999999999998 9999999
Q ss_pred CCcEEEcC-CCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccC----------------------CC
Q 002289 738 ASNILLDH-KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----------------------KL 794 (941)
Q Consensus 738 p~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~ 794 (941)
|+|||++. ++.+||+|||+|+...... ........+++.|+|||.+... .+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999986 5799999999997653221 1122345688999999965422 23
Q ss_pred CchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 002289 795 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 874 (941)
Q Consensus 795 ~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~ 874 (941)
+.++|||||||++|||+++..++.. +.... ...... ..... ..+.... .+..++...
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~--~~~~~-~~~l~~-----------~~~~~---~~~~~~~------~~~~~~~~~ 413 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDS--NLIQF-NRQLKR-----------NDYDL---VAWRKLV------EPRASPDLR 413 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCch--HHHHH-HHHHHh-----------cCCcH---HHHHHhh------ccccchhhh
Confidence 4567999999999999987655432 11111 110000 00010 1111110 111122211
Q ss_pred HHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCCCC
Q 002289 875 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 926 (941)
Q Consensus 875 ~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~~~ 926 (941)
+.. ...........|||.+||+.||++|||++|+|+||||+....
T Consensus 414 ~~~-------~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 414 RGF-------EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred hhh-------hhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 111 111122233458999999999999999999999999987544
No 386
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=2.7e-32 Score=319.54 Aligned_cols=206 Identities=29% Similarity=0.404 Sum_probs=163.5
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeecccc--------
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-------- 676 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-------- 676 (941)
-..+|+..+.||+||||.||+++.+ ||+.||||++.... ...-..+.+|+..+++++|||||+++....+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 4456778889999999999999976 89999999987653 1223568899999999999999999721100
Q ss_pred --------------------------------------------------------------------------------
Q 002289 677 -------------------------------------------------------------------------------- 676 (941)
Q Consensus 677 -------------------------------------------------------------------------------- 676 (941)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred -----------------------C--------CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc
Q 002289 677 -----------------------E--------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 725 (941)
Q Consensus 677 -----------------------~--------~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~ 725 (941)
+ ...||-||||+..+++++++++.... .....++++++|++||.|+|+
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHh
Confidence 0 13578899999888888887654321 467789999999999999999
Q ss_pred CCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC----CC-------CCCCccccccccccccCCCcccccccccC--
Q 002289 726 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP----VP-------DIEGIVPAHVSTVVKGTPGYLDPEYFLTH-- 792 (941)
Q Consensus 726 ~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~----~~-------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-- 792 (941)
+| ||||||||.||++|+++.|||+|||+|+... .. ...........+..+||.-|+|||++.+.
T Consensus 716 ~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 QG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred Cc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 99 9999999999999999999999999998722 00 00111122245677899999999999764
Q ss_pred -CCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 793 -KLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 793 -~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
.|+.|+|+||+|++++||+ +||..
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~---yPF~T 817 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEML---YPFGT 817 (1351)
T ss_pred ccccchhhhHHHHHHHHHHh---ccCCc
Confidence 4999999999999999999 56753
No 387
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-32 Score=304.23 Aligned_cols=200 Identities=31% Similarity=0.462 Sum_probs=171.4
Q ss_pred CCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCC-chhhHhHHHHHHHHHhcCCCceeeeeecccc------CCcEEE
Q 002289 611 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGEQML 682 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~~~L 682 (941)
+...+.||+|+||.||+|+. .+|+.||||.++... ....+...+|+++|++++|+|||++++.-.+ .+...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 44567899999999999995 579999999998643 3345678899999999999999999988543 346799
Q ss_pred EEecCCCCCHHHHHhhc-CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc--CCC--cEEEeeeccc
Q 002289 683 VYEFMSNGTLRDQLSAK-SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD--HKF--TAKVADFGLS 757 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~--~~~--~~kl~DFGla 757 (941)
|||||.+|||+..+.+. +...+++.+.+.+..+++.||.|||+++ ||||||||.||++- .+| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999999999753 3356999999999999999999999999 99999999999983 333 5899999999
Q ss_pred cccCCCCCCCccccccccccccCCCccccccccc-CCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
+.++.. ...+...||..|.+||.... +.|+..+|.|||||++||++||..||.+..
T Consensus 172 rel~d~--------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 172 RELDDN--------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ccCCCC--------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 977542 34577889999999999984 889999999999999999999999997543
No 388
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=5.1e-31 Score=292.35 Aligned_cols=195 Identities=33% Similarity=0.517 Sum_probs=165.4
Q ss_pred CCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCc---hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 611 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
|...+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|+++++.++|+|++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999964 689999999864322 2235678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
+. |++.+++.... .++++..++.++.|++.|++|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 95 68888875433 45899999999999999999999999 99999999999999999999999998864211
Q ss_pred CccccccccccccCCCcccccccc---cCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~ 224 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 224 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 12345788999999984 4568889999999999999999999997543
No 389
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=2.7e-31 Score=293.97 Aligned_cols=196 Identities=31% Similarity=0.506 Sum_probs=165.6
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
+.|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+++.+|+++++.++|+|++++++++...+..++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666788999999999999965 68899999886422 223356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
||+. |++.+++.... .++++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 9995 68888775433 45889999999999999999999998 999999999999999999999999998754321
Q ss_pred CCCccccccccccccCCCcccccccc---cCCCCchhHhHHHHHHHHHHHhCCCCCCCC
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 820 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltG~~Pf~~~ 820 (941)
....++..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 217 (308)
T cd06634 169 ----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (308)
T ss_pred ----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccc
Confidence 2234788999999975 356788999999999999999999998653
No 390
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-32 Score=307.23 Aligned_cols=286 Identities=25% Similarity=0.390 Sum_probs=217.4
Q ss_pred hHHHHHHhcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccc---
Q 002289 601 YGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD--- 675 (941)
Q Consensus 601 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~--- 675 (941)
++.+...++.|++.+.||+|.+|.||+++. ++++.+|+|+..... ..++++..|.++++.. .|||++.++|+|.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 344445677889999999999999999994 579999999987643 3445788899999888 6999999999983
Q ss_pred --cCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEee
Q 002289 676 --EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 753 (941)
Q Consensus 676 --~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~D 753 (941)
.++++|||||||.+||..|+++.-....+.|..+..|++.++.|+.+||... ++|||||-.|||++.++.||+.|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEee
Confidence 3578999999999999999998766778999999999999999999999998 99999999999999999999999
Q ss_pred eccccccCCCCCCCccccccccccccCCCcccccccccC-----CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002289 754 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 828 (941)
Q Consensus 754 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~ 828 (941)
||.+..+... ........||+.|||||++... .|+.++|+||+|++..||--|..|+.+....
T Consensus 167 FGvSaQldsT-------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm----- 234 (953)
T KOG0587|consen 167 FGVSAQLDST-------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM----- 234 (953)
T ss_pred eeeeeeeecc-------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-----
Confidence 9998765432 2344566799999999999643 4777999999999999999999999765431
Q ss_pred HHHhhccchhhhcCCCCC--CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCC
Q 002289 829 IAYQSSMMFSVIDGNMGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE 906 (941)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP 906 (941)
..++.+.....+. -|..+.+++-+.+..|+.+|.++||++.+++++-- ....+ ...+....|..+...++
T Consensus 235 -----raLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpF--i~e~~-~e~qir~~ik~~~~~~r 306 (953)
T KOG0587|consen 235 -----RALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPF--ITEQP-NERQVRIQIKDHIDRSR 306 (953)
T ss_pred -----hhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCc--ccccc-cHHHHHHHHHHHHhhcc
Confidence 1122222211111 35667777777777777777777777776664311 00000 11222335556666666
Q ss_pred CCCC
Q 002289 907 ETPP 910 (941)
Q Consensus 907 ~~R~ 910 (941)
.+|-
T Consensus 307 ~~k~ 310 (953)
T KOG0587|consen 307 KKRG 310 (953)
T ss_pred chhh
Confidence 4443
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-33 Score=295.77 Aligned_cols=202 Identities=22% Similarity=0.342 Sum_probs=177.7
Q ss_pred cCCCccceeeccCcEEEEEEEeCCC-cEEEEEEeccCC---chhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
.+++++..||-|+||.|-++..+.. ..+|+|++++.. ...++.+..|-++|...+.|.||++|..|.+++..|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 4455677899999999999887543 348888887543 333456888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 764 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~ 764 (941)
|-|-||.|+..++.++ .|+..+.+.++..+++|++|||+++ ||.|||||+|.+++.+|-+||.|||.|+....
T Consensus 500 EaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~-- 572 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS-- 572 (732)
T ss_pred HhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc--
Confidence 9999999999997654 5899999999999999999999999 99999999999999999999999999997754
Q ss_pred CCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchh
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 823 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~ 823 (941)
...+...+||+.|.|||.+.+...+.++|.||+|+++|||++|.+||...+..
T Consensus 573 ------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 573 ------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred ------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 34567789999999999999999999999999999999999999999865543
No 392
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=273.33 Aligned_cols=202 Identities=24% Similarity=0.389 Sum_probs=176.8
Q ss_pred HHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCch---hhHhHHHHHHHHHhc-CCCceeeeeeccccCCc
Q 002289 605 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 679 (941)
Q Consensus 605 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 679 (941)
....++|...++||+|+|..|-.+++. +.+.+|+|++++.... ....+..|-.+..+. +||.+|-++.+|..+..
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr 325 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR 325 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence 345678999999999999999999964 6789999999864332 234567787777776 79999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
.++|.||++||+|--+++++. .+++..++.+...|.-||.|||++| ||.||||.+|||+|..|.+|++|+|+++.
T Consensus 326 lffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred EEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhc
Confidence 999999999999987776554 4889999999999999999999999 99999999999999999999999999874
Q ss_pred cCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCC
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~ 818 (941)
- ..+...+...+||+.|.|||.+++..|...+|+|++||+++||+.|+.||+
T Consensus 401 ~-------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 401 G-------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred C-------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 2 233455667899999999999999999999999999999999999999996
No 393
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=2.1e-32 Score=293.37 Aligned_cols=301 Identities=21% Similarity=0.291 Sum_probs=216.8
Q ss_pred ccccchHHHHHHhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcC------CCcee
Q 002289 596 VRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH------HRNLV 668 (941)
Q Consensus 596 ~~~~~~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv 668 (941)
-..|.+.-.+....+|.+....|+|-|++|.+|.+. .|..||||++...... .+.=+.|+++|++|+ --|++
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHH
Confidence 345666666677899999999999999999999975 4789999999864332 245578999999996 34899
Q ss_pred eeeeccccCCcEEEEEecCCCCCHHHHHhhcCC-CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-
Q 002289 669 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK- 746 (941)
Q Consensus 669 ~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~- 746 (941)
+++..|....++|||||-+ .-+|.++|.+.+. ..+....+..++.|+.-||..|...+ |+|.||||+||||++.
T Consensus 498 rl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCc
Confidence 9999999999999999998 5799999987543 35888899999999999999999999 9999999999999865
Q ss_pred CcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHH
Q 002289 747 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 826 (941)
Q Consensus 747 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~ 826 (941)
..+||||||.|......+. +.+.-+..|+|||.+.|.+|+...|+||+||+|||+.||+..|.+..+-.
T Consensus 574 ~iLKLCDfGSA~~~~enei---------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~-- 642 (752)
T KOG0670|consen 574 NILKLCDFGSASFASENEI---------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ-- 642 (752)
T ss_pred ceeeeccCccccccccccc---------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH--
Confidence 5799999999987654332 22334557999999999999999999999999999999999997654411
Q ss_pred HHHHHhhccchhhhcCCCCCCChHHHHHHH----HHHHHh----cccCC-----------CCCCCHHHHHHHHHHhHhhC
Q 002289 827 VNIAYQSSMMFSVIDGNMGSYPSECVEKFI----KLALKC----CQDET-----------DARPSMSEVMRELESIWNMM 887 (941)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~l~~~c----~~~~p-----------~~RPs~~~v~~~L~~~~~~~ 887 (941)
|..+...-.+.+|..+...-+ .+-..| ...|+ .-.|| .++...|..... +
T Consensus 643 ---------MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPt-kdl~s~l~~~q~-~ 711 (752)
T KOG0670|consen 643 ---------MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPT-KDLGSELIAVQR-L 711 (752)
T ss_pred ---------HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcc-hhHHHHHhccCC-C
Confidence 001111111222221111000 000000 00011 01121 223333322111 1
Q ss_pred CCCC----CCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 888 PESD----TKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 888 ~~~~----~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
++.. .++.+||.+||..||++|+|..|||+||||+.
T Consensus 712 ~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 712 PDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred CchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 2222 23468999999999999999999999999975
No 394
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=2.1e-31 Score=282.47 Aligned_cols=296 Identities=22% Similarity=0.339 Sum_probs=214.9
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEeC----CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccC
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 677 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 677 (941)
++....+.|...++||+|.|++||+|.+. ..+.||+|.+...+. ..++.+|+++|..+ .+.||+++.+++...
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34455678899999999999999999853 468899998875433 35689999999998 599999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEEEeeecc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGL 756 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-~~~~kl~DFGl 756 (941)
+..++|+||+++..-.++... ++...+..+.+.+..||+++|++| ||||||||+|+|.+. .+.-.|.|||+
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred CeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 999999999999999998843 567888899999999999999999 999999999999974 56789999999
Q ss_pred ccccCCCC------C-------------------CC------------ccccccccccccCCCccccccccc-CCCCchh
Q 002289 757 SRLAPVPD------I-------------------EG------------IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKS 798 (941)
Q Consensus 757 a~~~~~~~------~-------------------~~------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~s 798 (941)
|....... . .+ ...........||++|+|||++.. ...+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97221100 0 00 000111234579999999999875 5678899
Q ss_pred HhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHH--hcccCCCCCCCHHHH
Q 002289 799 DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALK--CCQDETDARPSMSEV 876 (941)
Q Consensus 799 DVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--c~~~~p~~RPs~~~v 876 (941)
||||.|++++-+++++.||....+.......... + +....+.+...+-.+ .|++ ..+|+..++
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~t------i-------fG~~~mrk~A~l~g~~~l~~k--sn~~~~~e~ 324 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIAT------I-------FGSAEMRKCAALPGRILLWQK--SNIPTIPEL 324 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHH------H-------hChHHHHHHhhcCCceeeecc--ccccccHHH
Confidence 9999999999999999999865442221111000 0 001111111111111 1222 346666666
Q ss_pred HHHHHHhH-hhCCC--------------CCCCCcccccccCCCCCCCCCCCccCCCCCCCCC
Q 002289 877 MRELESIW-NMMPE--------------SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 923 (941)
Q Consensus 877 ~~~L~~~~-~~~~~--------------~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~ 923 (941)
....+... ..... .+..+.||++++|..||.+|+||+|+|+||||..
T Consensus 325 ~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 325 RVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred HhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 65555441 21111 1124578999999999999999999999999974
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=250.60 Aligned_cols=215 Identities=26% Similarity=0.382 Sum_probs=175.0
Q ss_pred HHHHhcCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccC-CchhhHhHHHHHHH-HHhcCCCceeeeeeccccCCcE
Q 002289 604 MALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 604 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~ 680 (941)
++...+.......||+|++|.|-+-++ .+|+..|+|++... ..+..++..+|+.+ ++...+|.+|.|+|.+..++..
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 444555555678899999999988875 58999999998753 23445678888886 4556899999999999999999
Q ss_pred EEEEecCCCCCHHHHHhh--cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 681 MLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
++.||.| .-||..+-.+ .....+++...-+|+..+.+||.|||++-+ +||||+||+|||++.+|++|++|||++-
T Consensus 121 wIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccce
Confidence 9999999 4588776543 244568899999999999999999999764 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccccCCCccccccccc----CCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002289 759 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 829 (941)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~ 829 (941)
.+... -..+...|...|||||.+.. ..|+-++||||+|+++.||.+++.||.......++++.
T Consensus 198 ~L~dS--------iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 198 YLVDS--------IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred eehhh--------hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 66431 22233457889999999864 36889999999999999999999999877765555443
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=303.79 Aligned_cols=255 Identities=28% Similarity=0.414 Sum_probs=195.1
Q ss_pred CCccceeeccCcEE-EEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEecCC
Q 002289 611 FNSSTQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 611 y~~~~~lG~G~fg~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
|...+.+|.|+-|+ ||+|.. +|+.||||++-... .+-..+|+..++.- +|||||++++.-.+....|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 44456789999985 799998 67899999876432 34567899999887 6999999999999999999999999
Q ss_pred CCCHHHHHhhc--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---C--CcEEEeeeccccccC
Q 002289 689 NGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---K--FTAKVADFGLSRLAP 761 (941)
Q Consensus 689 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~---~--~~~kl~DFGla~~~~ 761 (941)
..+|.++++.. ..........+.+..|++.||++||+.+ ||||||||.||||+. + .+++|+|||+++.+.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 67999999763 1111121445778899999999999998 999999999999975 3 479999999999876
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhC-CCCCCCCchhHHHHHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG-MQPISHGKNIVREVNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG-~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 840 (941)
.... .-.......||.+|+|||++....-+.++||||+||++|+.++| ..||.+.. .++..+ +
T Consensus 663 ~~~s----S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NI----------l 726 (903)
T KOG1027|consen 663 GGKS----SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANI----------L 726 (903)
T ss_pred CCcc----hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH--Hhhhhh----------h
Confidence 4331 12224567799999999999998888899999999999999995 89996432 222221 1
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCC
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 920 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpw 920 (941)
.+... ..+++ +..+.++.|||.+|+..||..||+|.++|.||+
T Consensus 727 ~~~~~--------------L~~L~-----------------------~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPl 769 (903)
T KOG1027|consen 727 TGNYT--------------LVHLE-----------------------PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPL 769 (903)
T ss_pred cCccc--------------eeeec-----------------------cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCc
Confidence 11100 00111 111115568999999999999999999999999
Q ss_pred CCCCCC
Q 002289 921 VSSDVS 926 (941)
Q Consensus 921 f~~~~~ 926 (941)
|.....
T Consensus 770 FW~~ek 775 (903)
T KOG1027|consen 770 FWDSEK 775 (903)
T ss_pred cCChHH
Confidence 977554
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.7e-30 Score=282.32 Aligned_cols=209 Identities=22% Similarity=0.309 Sum_probs=173.1
Q ss_pred cCCCccceeeccCcEEEEEEEe-CCCcEEEEEEeccCCchhh---HhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 609 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
.-|..++.||-|+||.|.++.. ++...+|.|.+.+.+.-.+ ..+..|-.||.....+-||+||-.|.+++.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 4466678899999999999984 4577899998876544332 34678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC--
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV-- 762 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~-- 762 (941)
||++||++-.+|-+.+ .|.+..++.++..+..|+++.|..| +|||||||+|||||.+|.+||+|||++.-+.-
T Consensus 709 dYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred eccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceecc
Confidence 9999999999986654 4889999999999999999999999 99999999999999999999999999753221
Q ss_pred -CCCCC------------------cc-----------c---cccccccccCCCcccccccccCCCCchhHhHHHHHHHHH
Q 002289 763 -PDIEG------------------IV-----------P---AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLE 809 (941)
Q Consensus 763 -~~~~~------------------~~-----------~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~e 809 (941)
..++. .. . .......+||..|+|||++....|+..+|+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 00000 00 0 001124579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCch
Q 002289 810 LLTGMQPISHGKN 822 (941)
Q Consensus 810 lltG~~Pf~~~~~ 822 (941)
|+.|+.||.....
T Consensus 864 m~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 864 MLVGQPPFLADTP 876 (1034)
T ss_pred HhhCCCCccCCCC
Confidence 9999999976543
No 398
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=1.9e-29 Score=321.97 Aligned_cols=324 Identities=30% Similarity=0.528 Sum_probs=233.4
Q ss_pred CCHHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCCCCCceEecCCCCCCCcceeeEEEecCCCCCccCCccccCCCCCCEE
Q 002289 32 TDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTIL 111 (941)
Q Consensus 32 ~~~~d~~aL~~~k~~~~~~~~~~~~w~~~~~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L 111 (941)
.+++|..||++||+++.++...+.+|+..++|| .|.||+|.+. .+|+.|+|++++++|.+++.|..+++|+.|
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c-~w~gv~c~~~------~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L 98 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSSADVC-LWQGITCNNS------SRVVSIDLSGKNISGKISSAIFRLPYIQTI 98 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCCCCCC-cCcceecCCC------CcEEEEEecCCCccccCChHHhCCCCCCEE
Confidence 467899999999999987766788998777775 7999999642 268899999988888888888888899999
Q ss_pred EcccCCCCCCCCCccC-CccccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccceEecccccc
Q 002289 112 DFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSI 190 (941)
Q Consensus 112 ~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 190 (941)
+|++|++.+.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+
T Consensus 99 ~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l 176 (968)
T PLN00113 99 NLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL 176 (968)
T ss_pred ECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcc
Confidence 9998888888886654 788888888888888776664 3466777777777777777777777777777777777777
Q ss_pred cccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCC-
Q 002289 191 SGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD- 269 (941)
Q Consensus 191 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~- 269 (941)
.+.+|..++++++|++|+|++|++++.+|..++++++|+.|+|++|++++ .+|..++++++|++|+|++|++++.+|.
T Consensus 177 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 255 (968)
T PLN00113 177 VGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG-EIPYEIGGLTSLNHLDLVYNNLTGPIPSS 255 (968)
T ss_pred cccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC-cCChhHhcCCCCCEEECcCceeccccChh
Confidence 76777777777777777777777776677777777777777777777766 5666677777777777777776665543
Q ss_pred CCCCCcccc----------------cccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCccCCCcccccccccC
Q 002289 270 LSRIPNLGY----------------LLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 333 (941)
Q Consensus 270 ~~~l~~l~~----------------l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 333 (941)
+..++++.. ..+.+|++|+|++|.+.+.+|..+.++++|+.|++++|.+++.+|..+..+
T Consensus 256 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l---- 331 (968)
T PLN00113 256 LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL---- 331 (968)
T ss_pred HhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcC----
Confidence 222222211 112356677777777777777777777777777777777776666666543
Q ss_pred ccccceEEccCCCCCCC-CCCC-CCCCCcEEEecCCCCc
Q 002289 334 ATETFILDFQNNNLTNI-SGSF-NIPPNVTVRLRGNPFC 370 (941)
Q Consensus 334 ~~~L~~L~Ls~N~l~~~-~~~~-~~~~~~~l~l~~Np~~ 370 (941)
++|+.|+|++|+++.. +..+ .++.++.|++++|.+.
T Consensus 332 -~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~ 369 (968)
T PLN00113 332 -PRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLT 369 (968)
T ss_pred -CCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeE
Confidence 3456788888887743 4333 5667788888888764
No 399
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-31 Score=289.95 Aligned_cols=292 Identities=22% Similarity=0.211 Sum_probs=177.7
Q ss_pred cceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceee
Q 002289 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (941)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (941)
..|++.|+|.+|-|+..-.+++.-++.|+.||||.|.|+.+.-..|..-.++++|+|++|+|+..--..|.++.+|..|.
T Consensus 124 sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlk 203 (873)
T KOG4194|consen 124 SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLK 203 (873)
T ss_pred ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeee
Confidence 45678888888777766566666667677777777666643334555555666666666666655555566666666666
Q ss_pred cccccccccCCcccccccccceEeccccccc------------------------ccCchhccCCCccceeeccCCcCCC
Q 002289 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSIS------------------------GQIPPELSRLPSLVHMLLDNNNLTG 216 (941)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~------------------------~~~p~~~~~l~~L~~L~L~~N~l~~ 216 (941)
|+.|+++...+..|.+|++|+.|+|..|+|. ..-.+.|..+.++++|+|+.|+++.
T Consensus 204 LsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~ 283 (873)
T KOG4194|consen 204 LSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA 283 (873)
T ss_pred cccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh
Confidence 6666666444455555555555555555544 3334455666666777777777766
Q ss_pred CCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCC
Q 002289 217 YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTG 296 (941)
Q Consensus 217 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~ 296 (941)
.-..++.+|++|+.|+||.|.|.. +-++.++...+|++|+|++|+|+...++ .+..+..|++|+|++|.|..
T Consensus 284 vn~g~lfgLt~L~~L~lS~NaI~r-ih~d~WsftqkL~~LdLs~N~i~~l~~~-------sf~~L~~Le~LnLs~Nsi~~ 355 (873)
T KOG4194|consen 284 VNEGWLFGLTSLEQLDLSYNAIQR-IHIDSWSFTQKLKELDLSSNRITRLDEG-------SFRVLSQLEELNLSHNSIDH 355 (873)
T ss_pred hhcccccccchhhhhccchhhhhe-eecchhhhcccceeEeccccccccCChh-------HHHHHHHhhhhcccccchHH
Confidence 555667777777777777777776 4667777778888888888888754442 23333344555555555555
Q ss_pred CcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCCCCCCCCC--CCCCCcEEEecCC-------
Q 002289 297 TIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGN------- 367 (941)
Q Consensus 297 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~~~--~~~~~~~l~l~~N------- 367 (941)
....+|..+++|+.|||++|.|++.|-+.-.-.. .++.|+.|+|.||+|+.|+-.. .++.+++|+|.+|
T Consensus 356 l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~--gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 356 LAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFN--GLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred HHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhc--cchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 5555555555566666666655555444222111 1334555556666655554322 4455555555555
Q ss_pred ----------------CCccCCCcccccCCC
Q 002289 368 ----------------PFCLNTNAEQFCGSH 382 (941)
Q Consensus 368 ----------------p~~c~c~~~~~~~~~ 382 (941)
.|.|||++.++-...
T Consensus 434 nAFe~m~Lk~Lv~nSssflCDCql~Wl~qWl 464 (873)
T KOG4194|consen 434 NAFEPMELKELVMNSSSFLCDCQLKWLAQWL 464 (873)
T ss_pred cccccchhhhhhhcccceEEeccHHHHHHHH
Confidence 467999998876644
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.2e-28 Score=261.49 Aligned_cols=186 Identities=35% Similarity=0.550 Sum_probs=164.6
Q ss_pred CcEEEEEEEeC-CCcEEEEEEeccCCchh-hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCHHHHHhh
Q 002289 621 GYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA 698 (941)
Q Consensus 621 ~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~ 698 (941)
+||.||+|+.. +|+.+|+|++....... .+.+.+|++.+++++|+||+++++++......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 58999999998655444 57899999999999999999999999998999999999999999999865
Q ss_pred cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccc
Q 002289 699 KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 778 (941)
Q Consensus 699 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 778 (941)
... +++..++.++.++++++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......
T Consensus 81 ~~~--~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~ 147 (244)
T smart00220 81 RGR--LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------LLTTFV 147 (244)
T ss_pred ccC--CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--------cccccc
Confidence 443 788999999999999999999998 9999999999999999999999999998654321 223445
Q ss_pred cCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 779 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 779 gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
++..|++||...+..++.++||||+|++++++++|..||..
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 78899999999988899999999999999999999999965
No 401
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.95 E-value=2.8e-28 Score=265.08 Aligned_cols=295 Identities=21% Similarity=0.242 Sum_probs=186.6
Q ss_pred CCCCCCCCCceEecCCCCCC---------CcceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCcc
Q 002289 60 GDPCTSNWTGVLCFNTTMDD---------GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIK 130 (941)
Q Consensus 60 ~~~c~~~w~gv~C~~~~~~~---------~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 130 (941)
+.+|.|.-.-..|+...+.. -+...+.|++++|.|+..-+..|-+|++|++++|.+|.++ .+|...+...
T Consensus 47 pa~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sg 125 (873)
T KOG4194|consen 47 PATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESG 125 (873)
T ss_pred CCcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccccccc
Confidence 34566666666776544321 2456788999999998777777888888888888888888 7776555555
Q ss_pred ccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccceEecccccccccCchhccCCCccceeecc
Q 002289 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (941)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 210 (941)
+|+.|+|.+|.|+..-.+.+..++.|+.||||.|.|+.+.-.+|..-.+|++|+|++|+|+..-.+.|.++.+|..|.|+
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLs 205 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLS 205 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecc
Confidence 57777777777776666667777777777777777775555566666677777777777776666667777777777777
Q ss_pred CCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEcc
Q 002289 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLS 290 (941)
Q Consensus 211 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls 290 (941)
+|+++...+..|.+|++|+.|+|..|+|.- .....|.++++|+.|.|..|.|. .+....|..+.++++|+|+
T Consensus 206 rNrittLp~r~Fk~L~~L~~LdLnrN~iri-ve~ltFqgL~Sl~nlklqrN~I~-------kL~DG~Fy~l~kme~l~L~ 277 (873)
T KOG4194|consen 206 RNRITTLPQRSFKRLPKLESLDLNRNRIRI-VEGLTFQGLPSLQNLKLQRNDIS-------KLDDGAFYGLEKMEHLNLE 277 (873)
T ss_pred cCcccccCHHHhhhcchhhhhhccccceee-ehhhhhcCchhhhhhhhhhcCcc-------cccCcceeeecccceeecc
Confidence 777775555666777777777777777653 22455666666666666666665 3444445555555555555
Q ss_pred CCcCCCCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCCCCCCCCC--CCCCCcEEEecCCC
Q 002289 291 NNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNP 368 (941)
Q Consensus 291 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~~~--~~~~~~~l~l~~Np 368 (941)
.|++...-..++-+|++|+.|+||+|.|+-.-++++... +.|+.|||++|+|+.+++.- .+..+++|.|+.|.
T Consensus 278 ~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsft-----qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Ns 352 (873)
T KOG4194|consen 278 TNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFT-----QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNS 352 (873)
T ss_pred cchhhhhhcccccccchhhhhccchhhhheeecchhhhc-----ccceeEeccccccccCChhHHHHHHHhhhhcccccc
Confidence 555555555555555555555555555553334433222 22345555555555553222 23334444444443
No 402
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=5.7e-28 Score=262.77 Aligned_cols=196 Identities=25% Similarity=0.371 Sum_probs=169.0
Q ss_pred cCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh--------hHhHHHHHHHHHhcC---CCceeeeeecccc
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------EKEFLTEIQFLSRLH---HRNLVSLVGYCDE 676 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~---h~nIv~l~~~~~~ 676 (941)
..|.....+|.|+||.|+.|+++ +...|+||.+.+...-. ...+-.|+++|..++ |+||+|++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 45888999999999999999976 46789999887643211 123567999999997 9999999999999
Q ss_pred CCcEEEEEecC-CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 002289 677 EGEQMLVYEFM-SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 755 (941)
Q Consensus 677 ~~~~~LV~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFG 755 (941)
++.+||+||-. ++.+|.+++..+.+ +++.++..|++||+.|+++||+++ |||||||-+||.++.+|-+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~--m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPR--MDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCc--cchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeecc
Confidence 99999999975 56799999976554 889999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccCCCC-chhHhHHHHHHHHHHHhCCCCCC
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPIS 818 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwSlG~ll~elltG~~Pf~ 818 (941)
.|..... ......+||..|.|||++.|.+|- ..-|||++|++||.++....||.
T Consensus 716 saa~~ks---------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKS---------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcC---------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9876532 234456799999999999998875 45899999999999999888875
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=272.67 Aligned_cols=253 Identities=23% Similarity=0.343 Sum_probs=195.0
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
.++|+...++|.|.||.||||++. .++..|+|+++......-+-..+|+-+++..+|+||+.++|.+...+..+++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 467888999999999999999964 6899999999876655556778899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
|.+|+|.+.-+. -.++++.++-..++..++|++|||+.+ =+|||||-.|||+++.|.+|++|||.+..+..
T Consensus 94 cgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqita---- 164 (829)
T KOG0576|consen 94 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITA---- 164 (829)
T ss_pred cCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhh----
Confidence 999999998754 346899999999999999999999999 79999999999999999999999999865432
Q ss_pred CccccccccccccCCCcccccccc---cCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCC
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 843 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (941)
. -.......||+.|||||+.. .+.|...+|||+.|+...|+---+.|.++-..... . +.+ .....+..
T Consensus 165 -t--i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~-l---~Lm--TkS~~qpp 235 (829)
T KOG0576|consen 165 -T--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA-L---FLM--TKSGFQPP 235 (829)
T ss_pred -h--hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH-H---HHh--hccCCCCC
Confidence 1 22345678999999999874 46789999999999999999887777654332111 0 000 00111111
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 844 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 844 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
...-+..+.+.+.++++.|+.++|++||+++.+++
T Consensus 236 ~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 236 TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11123344555556666666666666666655443
No 404
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.2e-25 Score=232.51 Aligned_cols=210 Identities=37% Similarity=0.605 Sum_probs=181.6
Q ss_pred eeccCcEEEEEEEeCC-CcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCHHH
Q 002289 617 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 694 (941)
Q Consensus 617 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~ 694 (941)
||+|.+|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++|+++++++......++|+||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 899999999865443 34678999999999999999999999999899999999999999999
Q ss_pred HHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEEEeeeccccccCCCCCCCcccccc
Q 002289 695 QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDIEGIVPAHV 773 (941)
Q Consensus 695 ~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~ 773 (941)
++.... ..+++..++.++.+++++++|||+.+ ++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------h
Confidence 996542 35889999999999999999999998 999999999999999 89999999999976543210 1
Q ss_pred ccccccCCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHH
Q 002289 774 STVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 852 (941)
Q Consensus 774 ~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (941)
.....+...|++||..... .++.++|+|++|++++++
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------ 187 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------ 187 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------
Confidence 2334567899999999887 888999999999999998
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 853 EKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 853 ~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
..+.+++..|+..+|.+||++.++++.
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 456788999999999999999988754
No 405
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.6e-25 Score=234.92 Aligned_cols=199 Identities=36% Similarity=0.527 Sum_probs=172.6
Q ss_pred CCccceeeccCcEEEEEEEeCC-CcEEEEEEeccCCch-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCC
Q 002289 611 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 688 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 688 (941)
|++.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667899999999999999764 899999999875544 56788999999999999999999999998899999999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 768 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 768 (941)
+++|.+++...... +++.....++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~---- 152 (225)
T smart00221 81 GGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDL---- 152 (225)
T ss_pred CCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc----
Confidence 99999999764432 788999999999999999999998 9999999999999999999999999998764322
Q ss_pred cccccccccccCCCccccccc-ccCCCCchhHhHHHHHHHHHHHhCCCCCCC
Q 002289 769 VPAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 769 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
........++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 153 --~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 --AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred --cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0122334577889999998 667788899999999999999999999965
No 406
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.93 E-value=3.8e-28 Score=264.83 Aligned_cols=276 Identities=25% Similarity=0.343 Sum_probs=218.8
Q ss_pred cceeeEEEecCCCCCcc-CCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCcccee
Q 002289 81 YLHLRELQLLNLNLSGN-LSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (941)
Q Consensus 81 ~~~l~~L~L~~~~l~~~-~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 159 (941)
++.++.+++.+|+|... +|+.+.+|..|+.||||+|++. ..|..+..-+++-.|+||+|+|..+.-..|.+|+.|-.|
T Consensus 77 Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfL 155 (1255)
T KOG0444|consen 77 LPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFL 155 (1255)
T ss_pred chhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhh
Confidence 45688889999998653 8899999999999999999999 889999999999999999999994444557899999999
Q ss_pred ecccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCC-CCCCccCCCCCCCCEEeccCCcC
Q 002289 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT-GYLPPELSELPKLLILQLDNNNF 238 (941)
Q Consensus 160 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l 238 (941)
|||+|++. .+|..+..|..|++|.|++|.+.-.--..+-.+++|+.|.+++.+=+ ..+|.++..+.+|..+|||+|++
T Consensus 156 DLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~L 234 (1255)
T KOG0444|consen 156 DLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNL 234 (1255)
T ss_pred ccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCC
Confidence 99999998 78888999999999999999887443344556677888888876643 35788888888888888888888
Q ss_pred CCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccC
Q 002289 239 EGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL 318 (941)
Q Consensus 239 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 318 (941)
. ..|+.+-++.+|+.|+||+|+|+..-... -...+|++|+||+|+++ .+|.++..|++|+.|.+.+|+|
T Consensus 235 p--~vPecly~l~~LrrLNLS~N~iteL~~~~--------~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL 303 (1255)
T KOG0444|consen 235 P--IVPECLYKLRNLRRLNLSGNKITELNMTE--------GEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKL 303 (1255)
T ss_pred C--cchHHHhhhhhhheeccCcCceeeeeccH--------HHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcc
Confidence 7 57888888888888888888887432211 12345678888888887 7788888888888888888877
Q ss_pred ccC-CCcccccccccC------------------ccccceEEccCCCCCCCCCCC-CCCCCcEEEecCCCC
Q 002289 319 SGS-IPSSIWQSRTLN------------------ATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 369 (941)
Q Consensus 319 ~~~-~p~~~~~l~~l~------------------~~~L~~L~Ls~N~l~~~~~~~-~~~~~~~l~l~~Np~ 369 (941)
+-. ||..++.+..|. ...|+.|.|++|.|.++|..+ .++.+..|+|+.||=
T Consensus 304 ~FeGiPSGIGKL~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 304 TFEGIPSGIGKLIQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred cccCCccchhhhhhhHHHHhhccccccCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcC
Confidence 633 666666655442 124678999999999999998 567788999999983
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=8.5e-26 Score=225.36 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=186.2
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeec-cccCCcEEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGY-CDEEGEQMLV 683 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~-~~~~~~~~LV 683 (941)
..+.|.+.+.+|+|.||.+-++.++ ..+.+|+|.+.... ...++|.+|...--.+ .|.||+.-|+. |+..+.++++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3467889999999999999999976 57889999887633 3356899998764445 58999987765 6778889999
Q ss_pred EecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE-c-CCCcEEEeeeccccccC
Q 002289 684 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-D-HKFTAKVADFGLSRLAP 761 (941)
Q Consensus 684 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl-~-~~~~~kl~DFGla~~~~ 761 (941)
+||+|.|+|.+-+... .+.+...++++.|++.|+.|+|+++ +||||||.+|||+ + +..++||+|||+.+...
T Consensus 101 qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccC
Confidence 9999999999887543 4788889999999999999999999 9999999999999 3 33489999999987542
Q ss_pred CCCCCCccccccccccccCCCcccccccccC-----CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHH--HHHHHHhhc
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR--EVNIAYQSS 834 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~--~~~~~~~~~ 834 (941)
.. .....-+-.|.+||..... ...+.+|||.||++++.++||+.||.......+ |-...|+.
T Consensus 175 ~t----------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~- 243 (378)
T KOG1345|consen 175 TT----------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLK- 243 (378)
T ss_pred ce----------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhc-
Confidence 11 1112234579999987532 356789999999999999999999974322111 11111221
Q ss_pred cchhhhcCCCCCCCh---HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002289 835 MMFSVIDGNMGSYPS---ECVEKFIKLALKCCQDETDARPSMSEVMRELES 882 (941)
Q Consensus 835 ~~~~~~~~~~~~~~~---~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 882 (941)
+.....|. ...+...++.++-+..++++|-...++.++...
T Consensus 244 -------rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 244 -------RKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred -------ccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 12222222 345677778888889999999666666555443
No 408
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=9.9e-27 Score=243.38 Aligned_cols=309 Identities=21% Similarity=0.231 Sum_probs=235.8
Q ss_pred CCCCCCCC---CceEecCCCCC----CCcceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCcccc
Q 002289 60 GDPCTSNW---TGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL 132 (941)
Q Consensus 60 ~~~c~~~w---~gv~C~~~~~~----~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 132 (941)
+.+|.|+- .-|.|....+. +-+...++|+|..|+|+...+.+|+.+++|+.||||+|+|+.+-|++|.++.+|
T Consensus 38 P~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l 117 (498)
T KOG4237|consen 38 PAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASL 117 (498)
T ss_pred CCCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhh
Confidence 45787765 44889775542 345678999999999997777799999999999999999999999999999999
Q ss_pred ceecccC-ccccCCCCcccCCcCccceeecccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccC
Q 002289 133 ELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (941)
Q Consensus 133 ~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 211 (941)
..|-+.+ |+|+......|++|.+|+.|.+.-|++.-+..+.|..|++|..|.|.+|.+...--..|..+.+++++.+..
T Consensus 118 ~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~ 197 (498)
T KOG4237|consen 118 LSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQ 197 (498)
T ss_pred hHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhc
Confidence 8887766 999977778899999999999999999988899999999999999999999944344888999999999999
Q ss_pred CcCC------------CCCCccCCCCCCCCEEeccCCcCCCCCcchhc-cCCCCCcEEEccCCCCcCCCCCCCCCCcccc
Q 002289 212 NNLT------------GYLPPELSELPKLLILQLDNNNFEGTTIPASY-SNMSKLLKLSLRNCSLQGPMPDLSRIPNLGY 278 (941)
Q Consensus 212 N~l~------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~ 278 (941)
|.+- ...|.+++......-..|.++++... -+..| ..++++..=..+.+..-+. .|...|
T Consensus 198 np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~-~a~kf~c~~esl~s~~~~~d~~d~~------cP~~cf 270 (498)
T KOG4237|consen 198 NPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQE-DARKFLCSLESLPSRLSSEDFPDSI------CPAKCF 270 (498)
T ss_pred CccccccccchhhhHHhhchhhcccceecchHHHHHHHhccc-chhhhhhhHHhHHHhhccccCcCCc------ChHHHH
Confidence 9832 23445555555555556666665531 22222 2222222212222222222 223335
Q ss_pred cccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCCCCCC-CCC-CC
Q 002289 279 LLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS-GSF-NI 356 (941)
Q Consensus 279 l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~-~~~-~~ 356 (941)
-.+.+|+.|+|++|+|+++-+.+|.++..|++|.|..|+|...--..| ..+..|+.|+|.+|+|+.+. ..+ ..
T Consensus 271 ~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f-----~~ls~L~tL~L~~N~it~~~~~aF~~~ 345 (498)
T KOG4237|consen 271 KKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMF-----QGLSGLKTLSLYDNQITTVAPGAFQTL 345 (498)
T ss_pred hhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhh-----hccccceeeeecCCeeEEEeccccccc
Confidence 556778999999999999999999999999999999999983333333 34556778999999999984 444 56
Q ss_pred CCCcEEEecCCCCccCCCcccccC
Q 002289 357 PPNVTVRLRGNPFCLNTNAEQFCG 380 (941)
Q Consensus 357 ~~~~~l~l~~Np~~c~c~~~~~~~ 380 (941)
..+.+|.|-+|||+|||.+.++-+
T Consensus 346 ~~l~~l~l~~Np~~CnC~l~wl~~ 369 (498)
T KOG4237|consen 346 FSLSTLNLLSNPFNCNCRLAWLGE 369 (498)
T ss_pred ceeeeeehccCcccCccchHHHHH
Confidence 678899999999999999987755
No 409
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=1.1e-26 Score=243.01 Aligned_cols=278 Identities=32% Similarity=0.465 Sum_probs=222.5
Q ss_pred cceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceee
Q 002289 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (941)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (941)
...+..++..+|+++ .+|+.++++.+|..|++.+|++.. .|...-+++.|++||..+|.++ .+|+.++.+.+|..||
T Consensus 136 ~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~Ly 212 (565)
T KOG0472|consen 136 LLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLY 212 (565)
T ss_pred Hhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHH
Confidence 345777888888888 578899999999999999999994 4445555999999999999998 8899999999999999
Q ss_pred cccccccccCCcccccccccceEecccccccccCchhcc-CCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCC
Q 002289 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS-RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (941)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 239 (941)
|..|+|. .+| .|.++..|++|+++.|+|+ .+|...+ ++++|..|||.+|++. ..|+.+..+.+|++||+|+|.|+
T Consensus 213 L~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is 288 (565)
T KOG0472|consen 213 LRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS 288 (565)
T ss_pred hhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc
Confidence 9999998 677 8999999999999999999 6676654 8999999999999999 78999999999999999999999
Q ss_pred CCCcchhccCCCCCcEEEccCCCCcCCCCC---------------------C----------------------------
Q 002289 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPD---------------------L---------------------------- 270 (941)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------~---------------------------- 270 (941)
+ +|..++++ .|+.|-+.+|.+...-.+ +
T Consensus 289 ~--Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tk 365 (565)
T KOG0472|consen 289 S--LPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTK 365 (565)
T ss_pred c--CCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhh
Confidence 5 88999999 899998888877321000 0
Q ss_pred ---------CCCCc-------------------------------------------------ccccccCCcCEEEccCC
Q 002289 271 ---------SRIPN-------------------------------------------------LGYLLSLNITTIKLSNN 292 (941)
Q Consensus 271 ---------~~l~~-------------------------------------------------l~~l~~~~L~~L~Ls~N 292 (941)
+.+|. .......+|..|+|++|
T Consensus 366 iL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN 445 (565)
T KOG0472|consen 366 ILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNN 445 (565)
T ss_pred hhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccc
Confidence 00000 00001234788888888
Q ss_pred cCCCCcchhhcCCcccceeecccccCccCCCcccccccc-------------------cCccccceEEccCCCCCCCCCC
Q 002289 293 KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT-------------------LNATETFILDFQNNNLTNISGS 353 (941)
Q Consensus 293 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-------------------l~~~~L~~L~Ls~N~l~~~~~~ 353 (941)
.+. .+|..++.+..|+.||++.|++. .+|..+..+.. ....+|..|||.+|.|..+|+.
T Consensus 446 ~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~ 523 (565)
T KOG0472|consen 446 LLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI 523 (565)
T ss_pred hhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChh
Confidence 888 78888888888999999998887 56644332211 1345788999999999999887
Q ss_pred C-CCCCCcEEEecCCCCc
Q 002289 354 F-NIPPNVTVRLRGNPFC 370 (941)
Q Consensus 354 ~-~~~~~~~l~l~~Np~~ 370 (941)
. +...+++|.+.||||.
T Consensus 524 LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 524 LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hccccceeEEEecCCccC
Confidence 7 7888999999999986
No 410
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.91 E-value=1.3e-26 Score=253.05 Aligned_cols=278 Identities=22% Similarity=0.377 Sum_probs=197.6
Q ss_pred ceeeEEEecCCCCCc-cCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceee
Q 002289 82 LHLRELQLLNLNLSG-NLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (941)
Q Consensus 82 ~~l~~L~L~~~~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (941)
+-|+.+|+++|.++| ..|.....+++++.|.|...++. .+|++++.+.+|++|.+++|++. .+-..+..|+.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 456777777777774 56777777777777777777776 67777777777777777777777 5566677777777777
Q ss_pred cccccccc-cCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCC
Q 002289 161 IDQNYISG-SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (941)
Q Consensus 161 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 239 (941)
+..|++.. -+|..+..|..|+.|+|++|++. ..|..+...+++-.|+||+|+|..+.-.-|.+++.|-+||||+|++.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh
Confidence 77777653 35666777777777777777777 66666777777777777777777333334667777777777777776
Q ss_pred CCCcchhccCCCCCcEEEccCCCCcC----CCCCCCCCCccc--------------ccccCCcCEEEccCCcCCCCcchh
Q 002289 240 GTTIPASYSNMSKLLKLSLRNCSLQG----PMPDLSRIPNLG--------------YLLSLNITTIKLSNNKLTGTIPSN 301 (941)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~~~~~~l~~l~--------------~l~~~~L~~L~Ls~N~l~~~~p~~ 301 (941)
.+|.-...+..|+.|+|++|.|.- ..|.+..+.-+. .-.+.||..+|||.|.+. .+|++
T Consensus 164 --~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPec 240 (1255)
T KOG0444|consen 164 --MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPEC 240 (1255)
T ss_pred --hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHH
Confidence 466667777777777777776642 122211111000 001246788999999998 89999
Q ss_pred hcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCCCCCCCCC-CCCCCcEEEecCCCCcc
Q 002289 302 FSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 371 (941)
Q Consensus 302 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~~~-~~~~~~~l~l~~Np~~c 371 (941)
+-++++|+.|+||+|+|+ .+...... ..+|+.|+||.|+|+.+|..+ .+++++.|++.+|.+.-
T Consensus 241 ly~l~~LrrLNLS~N~it-eL~~~~~~-----W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~F 305 (1255)
T KOG0444|consen 241 LYKLRNLRRLNLSGNKIT-ELNMTEGE-----WENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTF 305 (1255)
T ss_pred HhhhhhhheeccCcCcee-eeeccHHH-----HhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccc
Confidence 999999999999999998 44433333 346778999999999998777 88889999999988644
No 411
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=3.7e-27 Score=246.47 Aligned_cols=263 Identities=27% Similarity=0.430 Sum_probs=234.1
Q ss_pred eeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeeccc
Q 002289 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (941)
Q Consensus 84 l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 163 (941)
+..+.+++|++. .+.+.+.+|..|++|++++|++. ..|.+++.+..++.|+.++|+++ .+|..++++.+|..|+.++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 678899999998 46678999999999999999999 78889999999999999999999 8999999999999999999
Q ss_pred ccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCc
Q 002289 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (941)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 243 (941)
|.+. .+|++++.+-.|+.|+..+|+++ ..|+.++.+.+|..|++.+|++... |+..-+++.|+.||.-+|-++ .+
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~~N~L~--tl 198 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCNSNLLE--TL 198 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccchhhhh--cC
Confidence 9998 88889999999999999999999 7788899999999999999999955 444445999999999999998 69
Q ss_pred chhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhc-CCcccceeecccccCccCC
Q 002289 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFS-GLPRLQRLFIANNSLSGSI 322 (941)
Q Consensus 244 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~ 322 (941)
|..++.+.+|..|||.+|+|...+ +|.+. ..|++|+++.|+|+ .+|.+.. .+++|..|||++|+|+ ++
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~~lP-ef~gc--------s~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~ 267 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIRFLP-EFPGC--------SLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EV 267 (565)
T ss_pred ChhhcchhhhHHHHhhhcccccCC-CCCcc--------HHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cC
Confidence 999999999999999999998543 44433 34589999999999 6666655 8999999999999999 99
Q ss_pred CcccccccccCccccceEEccCCCCCCCCCCCCCCCCcEEEecCCCCc
Q 002289 323 PSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 370 (941)
Q Consensus 323 p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~l~~Np~~ 370 (941)
|..++.+++|+ .||||+|.|+.+|.+..--.+..|-+.|||+.
T Consensus 268 Pde~clLrsL~-----rLDlSNN~is~Lp~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 268 PDEICLLRSLE-----RLDLSNNDISSLPYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred chHHHHhhhhh-----hhcccCCccccCCcccccceeeehhhcCCchH
Confidence 99998876654 89999999999998884348899999999974
No 412
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=1.3e-24 Score=270.06 Aligned_cols=153 Identities=18% Similarity=0.177 Sum_probs=114.0
Q ss_pred hcCC-Cceeeeeecc-------ccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 002289 661 RLHH-RNLVSLVGYC-------DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 732 (941)
Q Consensus 661 ~l~h-~nIv~l~~~~-------~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 732 (941)
.++| +||++++++| ...+..+.++||+ +++|.+++... ...+++..++.++.||++||+|||+++ |+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---Iv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQG---IV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence 3455 5888888887 2234677889988 67999999643 345899999999999999999999999 99
Q ss_pred eccCCCCcEEEcCCCc-------------------EEEeeeccccccCCCCC---CC------ccccccccccccCCCcc
Q 002289 733 HRDIKASNILLDHKFT-------------------AKVADFGLSRLAPVPDI---EG------IVPAHVSTVVKGTPGYL 784 (941)
Q Consensus 733 H~DLkp~NILl~~~~~-------------------~kl~DFGla~~~~~~~~---~~------~~~~~~~~~~~gt~~y~ 784 (941)
||||||+|||++..+. +|++|||+++....... .. ...........||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999965444 45555555543211000 00 00000112245889999
Q ss_pred cccccccCCCCchhHhHHHHHHHHHHHhCCCCCC
Q 002289 785 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818 (941)
Q Consensus 785 aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~ 818 (941)
|||++.+..++.++|||||||++|||++|..|+.
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence 9999999999999999999999999999988764
No 413
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.5e-22 Score=224.59 Aligned_cols=267 Identities=21% Similarity=0.267 Sum_probs=201.0
Q ss_pred CCCccceeeccCcEEEEEEEeCCC--cEEEEEEeccCCchhhHhHHHHHHHHHhcCC----Cceeeeeecc-ccCCcEEE
Q 002289 610 NFNSSTQIGQGGYGKVYKGILPDG--TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYC-DEEGEQML 682 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~-~~~~~~~L 682 (941)
+|.+.++||+|+||.||++..... ..+|+|............+..|+.++..+.. +++..+++.. ...+..++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999997543 5789998776433333367889998888863 6899999998 57788999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-----CcEEEeeeccc
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-----FTAKVADFGLS 757 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~-----~~~kl~DFGla 757 (941)
||+.+ |.+|.++........++..+...|+.|++.+|+++|+.| ++||||||+|+++... ..+.|.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 899999887666677999999999999999999999999 9999999999999754 46999999999
Q ss_pred cccC--CCCCCCcccccc-ccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhc
Q 002289 758 RLAP--VPDIEGIVPAHV-STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 834 (941)
Q Consensus 758 ~~~~--~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~ 834 (941)
+... ........+.+. .....||..|.++.++.+.+.+.+.|+||++.++.|++.|..||........... +...
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~--~~~~ 252 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK--FEKD 252 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH--HHHH
Confidence 9433 222111111222 3456699999999999999999999999999999999999999965443211111 0000
Q ss_pred cchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002289 835 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 886 (941)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 886 (941)
........ .....+..+.++...+-..+..++|.+..+...++.....
T Consensus 253 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 253 PRKLLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hhhhcccc----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 00000100 1222334555566666668999999999999988776554
No 414
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=8.1e-24 Score=210.77 Aligned_cols=247 Identities=18% Similarity=0.355 Sum_probs=196.2
Q ss_pred cceeeccCcEEEEEEEeCCCcEEEEEEeccCCc--hhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCC
Q 002289 614 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 691 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 691 (941)
..+|.+...|..|+|+|+ |..+++|+++-... ...++|..|.-.++-+.||||++++|.|.......++..||+.||
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 447888999999999995 45566677654322 234679999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcccc
Q 002289 692 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 771 (941)
Q Consensus 692 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 771 (941)
|+.++++......+..++.+++.++|+|++|||+.. +-|----|.+..|++|++.+++|+= +-+++ +
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kf-----------s 340 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKF-----------S 340 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-cccee-----------e
Confidence 999999988777888999999999999999999975 2233456899999999999888751 11111 1
Q ss_pred ccccccccCCCcccccccccCCCC---chhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCC
Q 002289 772 HVSTVVKGTPGYLDPEYFLTHKLT---DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 848 (941)
Q Consensus 772 ~~~~~~~gt~~y~aPE~~~~~~~~---~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (941)
-......-.+.||+||.+...+-+ .++|+|||++++||+.|+..||.+-....-- +.-.+.+-+..+|
T Consensus 341 fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg---------mkialeglrv~ip 411 (448)
T KOG0195|consen 341 FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG---------MKIALEGLRVHIP 411 (448)
T ss_pred eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh---------hhhhhccccccCC
Confidence 111223346799999999876533 4699999999999999999999865543222 2223445566688
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002289 849 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 883 (941)
Q Consensus 849 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 883 (941)
+.....+.+++.-|+..||.+||.+..++..|++.
T Consensus 412 pgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 412 PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 88899999999999999999999999999888865
No 415
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.3e-22 Score=206.36 Aligned_cols=268 Identities=19% Similarity=0.288 Sum_probs=210.3
Q ss_pred cCCCccceeeccCcEEEEEEE-eCCCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcEEEEEec
Q 002289 609 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
-.|++.++||+|.||..+.|+ +-+++.||||.-...+ ...++..|.+..+.+ ..+.|..++-+-.+..+-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 368889999999999999999 4578999999865432 234678899988888 578999988888888889999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-----CCcEEEeeeccccccC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLAP 761 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-----~~~~kl~DFGla~~~~ 761 (941)
+ |.||.|++.- ....|+..++..+|.|++.-++|+|++. .|.|||||+|.||.. ...+.|+|||+|+.+.
T Consensus 106 L-GPSLEDLFD~-CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 106 L-GPSLEDLFDL-CGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred h-CcCHHHHHHH-hcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 9 8999998854 3456999999999999999999999999 999999999999963 3469999999999998
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc--hhHHHHHHHHhhccchhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK--NIVREVNIAYQSSMMFSV 839 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~--~~~~~~~~~~~~~~~~~~ 839 (941)
.++.....+-+......||.+||+--...|.+.+.+.|.-|+|-++.+.+.|..||..-. +..+.++. +
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK---------I 251 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK---------I 251 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH---------h
Confidence 887776677777788899999999999999999999999999999999999999997532 11111111 1
Q ss_pred hcCCCCC----CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCC
Q 002289 840 IDGNMGS----YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 892 (941)
Q Consensus 840 ~~~~~~~----~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~ 892 (941)
-+..... .-+..+.++..-+...-..+-++-|.++-+...+.+.++..-..++
T Consensus 252 Ge~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~D 308 (449)
T KOG1165|consen 252 GETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDD 308 (449)
T ss_pred ccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCccc
Confidence 1111111 1123344555555555566778889998888777777665544443
No 416
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.6e-22 Score=198.85 Aligned_cols=271 Identities=20% Similarity=0.270 Sum_probs=209.0
Q ss_pred HhcCCCccceeeccCcEEEEEEE-eCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCC-CceeeeeeccccCCcEEEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~LV~ 684 (941)
..++|.++++||.|+||.+|.|. ..+|..||||+-..... ..++..|.++.+.+++ ..|..+..|..+.+.-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 35689999999999999999999 56899999998765332 2467889999999975 56777788888888999999
Q ss_pred ecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeeccccccC
Q 002289 685 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAP 761 (941)
Q Consensus 685 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~---~~~~kl~DFGla~~~~ 761 (941)
|.+ |.||.+++.-. ...++..+++-++-|++.-++|+|.++ +|||||||+|.|..- ...+.++|||+|+.+.
T Consensus 91 dLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhc
Confidence 999 89999988543 345899999999999999999999999 999999999999953 4579999999999886
Q ss_pred CCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHH-HHHHHhhccchhhh
Q 002289 762 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE-VNIAYQSSMMFSVI 840 (941)
Q Consensus 762 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~ 840 (941)
........+.+......||.+|.+--...+.+.+.+.|+-|+|.+|..+-.|..||..-....+. ......+..+...+
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 65544445566667788999999999988888899999999999999999999999864322111 11111111111111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002289 841 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 888 (941)
Q Consensus 841 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 888 (941)
.. .-..++.++.-.+..|-..--++.|...-+.+....++....
T Consensus 246 e~----LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 246 EV----LCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred HH----HhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 11 122344567777888888888899998877777766655443
No 417
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=1.3e-22 Score=204.89 Aligned_cols=168 Identities=21% Similarity=0.288 Sum_probs=124.4
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|||.++++.+ ...+++..++.++.|+++||+|||+++ ||+|||++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc------
Confidence 7899999754 346999999999999999999999876 999999999999999 9998764321
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
...||+.|+|||++.+..++.++|||||||++|||+||+.||................. .. ........+.
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~ 133 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGM--PA-DDPRDRSNLE 133 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHh--cc-CCccccccHH
Confidence 12578999999999999999999999999999999999999965433222222111100 00 0000011222
Q ss_pred HHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002289 850 ECVE--KFIKLALKCCQDETDARPSMSEVMRELESIW 884 (941)
Q Consensus 850 ~~~~--~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 884 (941)
.... .+.+++..|+..+|++||++.++++++....
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3333 5788888888888888888888887776543
No 418
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.4e-22 Score=224.01 Aligned_cols=171 Identities=19% Similarity=0.203 Sum_probs=131.6
Q ss_pred HHhcCCCccceeeccCcEEEEEEEeC--CCcEEEEEEeccCC-----chhhHhHHHHHHHHHhcCCCceee-eeeccccC
Q 002289 606 LATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVS-LVGYCDEE 677 (941)
Q Consensus 606 ~~~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~~~ 677 (941)
...++|.+.+.||+|+||+||+|+++ +++.||||+..... ....+.+.+|++++++++|+|+++ ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 35678999999999999999999864 57888999865321 123456899999999999999985 5442
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC-CCCcEEEcCCCcEEEeeecc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI-KASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DL-kp~NILl~~~~~~kl~DFGl 756 (941)
+..++||||++|++|.. +... . ...++.++++||+|||+++ |+|||| ||+|||++.++.+||+|||+
T Consensus 91 ~~~~LVmE~~~G~~L~~-~~~~-----~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL-ARPH-----G---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CCcEEEEEccCCCCHHH-hCcc-----c---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 45799999999999973 2111 1 1457889999999999999 999999 99999999999999999999
Q ss_pred ccccCCCCCCCcccc-ccccccccCCCcccccccccC
Q 002289 757 SRLAPVPDIEGIVPA-HVSTVVKGTPGYLDPEYFLTH 792 (941)
Q Consensus 757 a~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~ 792 (941)
|+........+.... .......++..|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 997754332211111 112456788899999998653
No 419
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=4.4e-23 Score=242.80 Aligned_cols=262 Identities=20% Similarity=0.248 Sum_probs=188.7
Q ss_pred ccceeeccCcEEEEEEEeC-CCcEEEEEEec----cCCc-h-hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEe
Q 002289 613 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQ----EGSL-Q-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 685 (941)
Q Consensus 613 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~----~~~~-~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 685 (941)
..+.+|.|++|.|+..... ....++.|.+. .... . ....+..|+-+-..++|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3678999999988877643 33444444332 1111 1 11225667778888999999988888877777666799
Q ss_pred cCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 686 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 686 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
||++ +|..++... ..+....+..+..|+..|++|+|+.| |.|||+|++|++++.+|.+||+|||.+.....+..
T Consensus 402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9999 999998654 24777888899999999999999999 99999999999999999999999999976654321
Q ss_pred CCccccccccccccCCCcccccccccCCCCch-hHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCC
Q 002289 766 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 844 (941)
Q Consensus 766 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (941)
. .........|+..|+|||++.+.+|.++ .||||.|+++..|.+|+.||........... .......
T Consensus 476 ~---~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~---------~~~~~~~ 543 (601)
T KOG0590|consen 476 K---NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK---------TNNYSDQ 543 (601)
T ss_pred h---hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh---------hhccccc
Confidence 1 1245567889999999999999999875 8999999999999999999964332111000 0000000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCCCCCCCCC
Q 002289 845 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 924 (941)
Q Consensus 845 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~Hpwf~~~ 924 (941)
.... -....++..| + ......|.+||++||++|+|++++++++||+..
T Consensus 544 ~~~~----------------------~~~~~~~~~l-------p---~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 544 RNIF----------------------EGPNRLLSLL-------P---RETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred cccc----------------------cChHHHHHhc-------h---hhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 0000 0111122111 1 122357889999999999999999999999873
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=8e-21 Score=226.02 Aligned_cols=237 Identities=28% Similarity=0.381 Sum_probs=153.7
Q ss_pred eeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecc
Q 002289 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (941)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (941)
+++.|++.+|+|+. +|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.|+ .+|..+ .+|+.|+|+
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls 290 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWIF 290 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhch---hhcCEEECc
Confidence 45666666666663 332 2456666666666666 34432 345666666666666 344322 456666677
Q ss_pred cccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCC
Q 002289 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (941)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 242 (941)
+|+|+ .+|.. +++|+.|+|++|+|++ +|.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++
T Consensus 291 ~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-- 356 (788)
T PRK15387 291 GNQLT-SLPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-- 356 (788)
T ss_pred CCccc-ccccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-cccc---ccccceEecCCCccCC--
Confidence 77666 33432 3567777777777763 3432 2356666777777763 4431 1467777777777774
Q ss_pred cchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCccCC
Q 002289 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 322 (941)
Q Consensus 243 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 322 (941)
+|.. ..+|+.|++++|+|++. |.+ ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|+ .+
T Consensus 357 LP~l---p~~L~~L~Ls~N~L~~L-P~l----------~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sI 417 (788)
T PRK15387 357 LPTL---PSELYKLWAYNNRLTSL-PAL----------PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SL 417 (788)
T ss_pred CCCC---CcccceehhhccccccC-ccc----------ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CC
Confidence 4443 24566777777777742 221 1357899999999995 5543 357999999999998 57
Q ss_pred CcccccccccCccccceEEccCCCCCCCCCCC-CCCCCcEEEecCCCCccC
Q 002289 323 PSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLN 372 (941)
Q Consensus 323 p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~~~-~~~~~~~l~l~~Np~~c~ 372 (941)
|... .+|+.|+|++|+|+.+|..+ .++.+..|+|++|||.+.
T Consensus 418 P~l~--------~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 418 PMLP--------SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred Ccch--------hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCch
Confidence 7542 34678999999999998777 688899999999998753
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=4.5e-21 Score=229.80 Aligned_cols=246 Identities=24% Similarity=0.411 Sum_probs=198.7
Q ss_pred eeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecc
Q 002289 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (941)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (941)
+.+.|++++++++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. ++|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 46789999999884 666553 58999999999999 6776554 58999999999999 6676554 479999999
Q ss_pred cccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCC
Q 002289 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (941)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 242 (941)
+|+++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|+|++|+|+.
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-- 318 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-- 318 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc--
Confidence 99998 6677664 58999999999999 5777654 589999999999994 565443 579999999999985
Q ss_pred cchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCccCC
Q 002289 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 322 (941)
Q Consensus 243 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 322 (941)
+|..+. ++|+.|++++|.|++.+..+ ..+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt~LP~~l----------~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALTSLPASL----------PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NL 382 (754)
T ss_pred CCcccc--ccceeccccCCccccCChhh----------cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CC
Confidence 555443 68999999999998644322 246899999999998 5676663 68999999999999 67
Q ss_pred CcccccccccCccccceEEccCCCCCCCCCCC-----CCCCCcEEEecCCCCcc
Q 002289 323 PSSIWQSRTLNATETFILDFQNNNLTNISGSF-----NIPPNVTVRLRGNPFCL 371 (941)
Q Consensus 323 p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~~~-----~~~~~~~l~l~~Np~~c 371 (941)
|..+. ..|+.|++++|+|+.+|..+ ..+.+..|+|.+||+..
T Consensus 383 P~~l~-------~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 383 PENLP-------AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred CHhHH-------HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 77653 25789999999999998665 34677899999999863
No 422
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.84 E-value=1.9e-19 Score=199.31 Aligned_cols=258 Identities=31% Similarity=0.484 Sum_probs=196.6
Q ss_pred CCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCch---hhHhHHHHHHHHHhcCCC-ceeeeeeccccCCcEEEEEec
Q 002289 611 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~LV~e~ 686 (941)
|.+...||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999986 78999988754332 356799999999999988 799999999777778999999
Q ss_pred CCCCCHHHHHhhcCC-CCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-cEEEeeeccccccCCCC
Q 002289 687 MSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPD 764 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~-~~kl~DFGla~~~~~~~ 764 (941)
+.++++.+++..... ..+.......+..|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977754432 25888999999999999999999999 99999999999999988 79999999998554322
Q ss_pred CCCccccccccccccCCCccccccccc---CCCCchhHhHHHHHHHHHHHhCCCCCCCCch---hHHHHHHHHhhccchh
Q 002289 765 IEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREVNIAYQSSMMFS 838 (941)
Q Consensus 765 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~---~~~~~~~~~~~~~~~~ 838 (941)
..... ........|+..|+|||.+.+ ..+....|+||+|++++++++|..||..... ..+........ ...
T Consensus 157 ~~~~~-~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~- 233 (384)
T COG0515 157 STSSI-PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL-PTP- 233 (384)
T ss_pred ccccc-cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc-CCc-
Confidence 11000 013456779999999999988 5788899999999999999999999765543 11111111110 000
Q ss_pred hhcCCCCCCC----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002289 839 VIDGNMGSYP----SECVEKFIKLALKCCQDETDARPSMSEVMRE 879 (941)
Q Consensus 839 ~~~~~~~~~~----~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 879 (941)
....... ......+.+++..|+..+|..|.+..+....
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0001111 1223567888899999999999988876654
No 423
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=8.9e-20 Score=185.63 Aligned_cols=139 Identities=19% Similarity=0.150 Sum_probs=108.3
Q ss_pred cceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh---------h-----------------HhHHHHHHHHHhcCCCce
Q 002289 614 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG---------E-----------------KEFLTEIQFLSRLHHRNL 667 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---------~-----------------~~~~~E~~~l~~l~h~nI 667 (941)
...||+|+||.||+|...+|+.||||+++...... . .....|++.++++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46799999999999998889999999987542110 1 122359999999988776
Q ss_pred eeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHh-hcCCCCCeEeccCCCCcEEEcCC
Q 002289 668 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL-HTEADPPVFHRDIKASNILLDHK 746 (941)
Q Consensus 668 v~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~DLkp~NILl~~~ 746 (941)
.....+.. ...++||||++++++....... ..++......++.|++.+|.|+ |+.+ |+||||||+||+++ +
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-C
Confidence 43333222 2348999999888776543222 3588899999999999999999 6888 99999999999998 4
Q ss_pred CcEEEeeecccccc
Q 002289 747 FTAKVADFGLSRLA 760 (941)
Q Consensus 747 ~~~kl~DFGla~~~ 760 (941)
+.++|+|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999999754
No 424
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=4.9e-20 Score=189.34 Aligned_cols=171 Identities=15% Similarity=0.104 Sum_probs=133.6
Q ss_pred HhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHh---------HHHHHHHHHhcCCCceeeeeeccccC
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE---------FLTEIQFLSRLHHRNLVSLVGYCDEE 677 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~~ 677 (941)
..++|+..+.+|.|+||.||.+.. ++..+|||.+.......++. +.+|++.+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 478999999999999999999766 57789999997544333222 67899999999999999998886432
Q ss_pred --------CcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcE
Q 002289 678 --------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 749 (941)
Q Consensus 678 --------~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~ 749 (941)
+..++||||++|.+|.++.. ++. ....+++.++..+|+.+ ++|||+||+||++++++ +
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-E
Confidence 35899999999999988741 222 24558899999999999 99999999999999988 9
Q ss_pred EEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHH
Q 002289 750 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 811 (941)
Q Consensus 750 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ell 811 (941)
+|+|||..+....... ...+.....+..++|+|+||+++.-..
T Consensus 174 ~liDfg~~~~~~e~~a-------------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKA-------------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhh-------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 9999998865422110 011334455667899999999877654
No 425
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.80 E-value=3.4e-21 Score=221.31 Aligned_cols=264 Identities=27% Similarity=0.320 Sum_probs=188.8
Q ss_pred eeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecc
Q 002289 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (941)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (941)
+++.|+..+|-+.... .-..-.+|+.+|+++|+++ .+|+.++.+.+|+.|+..+|+|+ .+|..+...++|+.|++.
T Consensus 220 ~l~~L~a~~n~l~~~~--~~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~ 295 (1081)
T KOG0618|consen 220 SLTALYADHNPLTTLD--VHPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAA 295 (1081)
T ss_pred chheeeeccCcceeec--cccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhh
Confidence 4555555555555211 1123456777777777777 55677777777777777777775 677777777777777777
Q ss_pred cccccccCCcccccccccceEecccccccccCchh-ccCCC-ccceeeccCCcCCCCCCc-cCCCCCCCCEEeccCCcCC
Q 002289 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPE-LSRLP-SLVHMLLDNNNLTGYLPP-ELSELPKLLILQLDNNNFE 239 (941)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~ 239 (941)
.|.++ .+|.....++.|++|+|..|+|. ..|+. |.-+. +|..|+.+.|++.. .|. .=..++.|+.|++.+|.|+
T Consensus 296 ~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~-lp~~~e~~~~~Lq~LylanN~Lt 372 (1081)
T KOG0618|consen 296 YNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLST-LPSYEENNHAALQELYLANNHLT 372 (1081)
T ss_pred hhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccc-cccccchhhHHHHHHHHhcCccc
Confidence 77777 66777777777888888888777 34443 33333 36777777777763 331 1223567888899999988
Q ss_pred CCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCc
Q 002289 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 319 (941)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 319 (941)
. ..-..+.+++.|+.|+|++|+|...+ .-.+..+..|++|+||+|+|+ .+|.++.+++.|+.|...+|+|.
T Consensus 373 d-~c~p~l~~~~hLKVLhLsyNrL~~fp-------as~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~ 443 (1081)
T KOG0618|consen 373 D-SCFPVLVNFKHLKVLHLSYNRLNSFP-------ASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL 443 (1081)
T ss_pred c-cchhhhccccceeeeeecccccccCC-------HHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee
Confidence 7 45566788889999999999887333 233334455688899999998 78899999999999999999998
Q ss_pred cCCCcccccccccCccccceEEccCCCCCCC--CCCCCCCCCcEEEecCCCC
Q 002289 320 GSIPSSIWQSRTLNATETFILDFQNNNLTNI--SGSFNIPPNVTVRLRGNPF 369 (941)
Q Consensus 320 ~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~--~~~~~~~~~~~l~l~~Np~ 369 (941)
..| .+.+ .+.|+++|||.|+|+.+ +.....|.++.|+|+||+|
T Consensus 444 -~fP-e~~~-----l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 444 -SFP-ELAQ-----LPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred -ech-hhhh-----cCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 677 5544 45567999999999987 4444668899999999996
No 426
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.79 E-value=1.4e-18 Score=222.59 Aligned_cols=276 Identities=19% Similarity=0.260 Sum_probs=185.5
Q ss_pred CcceeeEEEecCCC------CCccCCccccCCC-CCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCC
Q 002289 80 GYLHLRELQLLNLN------LSGNLSPEIGRLS-YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGY 152 (941)
Q Consensus 80 ~~~~l~~L~L~~~~------l~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 152 (941)
...+++.|.+.++. +...+|..|..++ +|+.|++.+|.+. .+|..| .+.+|+.|+|++|++. .++..+..
T Consensus 556 ~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~ 632 (1153)
T PLN03210 556 GMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHS 632 (1153)
T ss_pred cCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccccccc
Confidence 35567777775542 3334666666654 4788888887776 667666 4677888888888877 56777777
Q ss_pred cCccceeecccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEe
Q 002289 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQ 232 (941)
Q Consensus 153 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 232 (941)
+++|+.|+|++|...+.+|. +..+++|+.|+|++|.....+|..+..+++|+.|++++|...+.+|..+ ++++|+.|+
T Consensus 633 l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~ 710 (1153)
T PLN03210 633 LTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLN 710 (1153)
T ss_pred CCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEe
Confidence 88888888877654445553 6777888888888776666777777788888888887765444666554 677788888
Q ss_pred ccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCccc-----------------------ccccCCcCEEEc
Q 002289 233 LDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLG-----------------------YLLSLNITTIKL 289 (941)
Q Consensus 233 Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~-----------------------~l~~~~L~~L~L 289 (941)
|++|...+ .+|.. ..+|+.|+|++|.++..+..+ .++++. +....+|+.|+|
T Consensus 711 Lsgc~~L~-~~p~~---~~nL~~L~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~L 785 (1153)
T PLN03210 711 LSGCSRLK-SFPDI---STNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFL 785 (1153)
T ss_pred CCCCCCcc-ccccc---cCCcCeeecCCCccccccccc-cccccccccccccchhhccccccccchhhhhccccchheeC
Confidence 87775443 34432 356777777777776443321 222222 122357899999
Q ss_pred cCCcCCCCcchhhcCCcccceeecccccCccCCCcccccccc---cC-------------ccccceEEccCCCCCCCCCC
Q 002289 290 SNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT---LN-------------ATETFILDFQNNNLTNISGS 353 (941)
Q Consensus 290 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---l~-------------~~~L~~L~Ls~N~l~~~~~~ 353 (941)
++|...+.+|..++++++|+.|+|++|...+.+|..+ .+.. |. ..+|+.|+|++|.|+.+|..
T Consensus 786 s~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~n~i~~iP~s 864 (1153)
T PLN03210 786 SDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEVPWW 864 (1153)
T ss_pred CCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccccccCEeECCCCCCccChHH
Confidence 9999888999999999999999999986555777654 1111 10 13456666666777666655
Q ss_pred C-CCCCCcEEEecC
Q 002289 354 F-NIPPNVTVRLRG 366 (941)
Q Consensus 354 ~-~~~~~~~l~l~~ 366 (941)
+ .++.+..|+|.+
T Consensus 865 i~~l~~L~~L~L~~ 878 (1153)
T PLN03210 865 IEKFSNLSFLDMNG 878 (1153)
T ss_pred HhcCCCCCEEECCC
Confidence 5 566666777665
No 427
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=7.2e-19 Score=176.61 Aligned_cols=191 Identities=14% Similarity=0.074 Sum_probs=140.4
Q ss_pred CccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh----hHhHHHHHHHHHhcC-CCceeeeeeccccCCcEEEEEec
Q 002289 612 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 612 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
.+...|++|+||+||.+.. .+..++.+.+....... ...+.+|+++|+++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999997765 67888878776543321 125789999999995 5889999886 457999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC-CCCcEEEcCCCcEEEeeeccccccCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI-KASNILLDHKFTAKVADFGLSRLAPVPDI 765 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DL-kp~NILl~~~~~~kl~DFGla~~~~~~~~ 765 (941)
++|.+|.+.+.. ....++.|++++|+++|+++ |+|||| ||+|||++.++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999998764421 11346788999999999999 999999 79999999999999999999985432210
Q ss_pred C-Cccc----cc-cccccccCCCcccccccccC-CCC-chhHhHHHHHHHHHHHhCCCCCCC
Q 002289 766 E-GIVP----AH-VSTVVKGTPGYLDPEYFLTH-KLT-DKSDVYSLGVVFLELLTGMQPISH 819 (941)
Q Consensus 766 ~-~~~~----~~-~~~~~~gt~~y~aPE~~~~~-~~~-~~sDVwSlG~ll~elltG~~Pf~~ 819 (941)
. .... .+ .......++.|++|+...-. ..+ .+.+.++.|+.+|.++||..+...
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0000 00 01123367788888865432 333 568999999999999999888753
No 428
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.3e-20 Score=208.56 Aligned_cols=222 Identities=27% Similarity=0.295 Sum_probs=170.9
Q ss_pred eeccCcEEEEEEE----eCCCcEEEEEEeccCCchh--hHhHHHHHHHHHhcC-CCceeeeeeccccCCcEEEEEecCCC
Q 002289 617 IGQGGYGKVYKGI----LPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSN 689 (941)
Q Consensus 617 lG~G~fg~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~~~~ 689 (941)
+|+|.||.|+.+. .+.|..+|.|+.+...... ......|..++...+ ||.+++++-.+..+...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6999999999765 2347889999887643322 124456778888886 99999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCcc
Q 002289 690 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 769 (941)
Q Consensus 690 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 769 (941)
|.|...+... ..+.+.....+...++-+++++|+.+ |+|||+|++||+++.+|.+++.|||+++..-..+
T Consensus 82 g~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----- 151 (612)
T KOG0603|consen 82 GDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----- 151 (612)
T ss_pred chhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh-----
Confidence 9998887543 34677777778888999999999999 9999999999999999999999999998653221
Q ss_pred ccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCCh
Q 002289 770 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 849 (941)
Q Consensus 770 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (941)
..+||..|||||++. ....++|.||||++++||+||..||.. +.. ..+-..-..+|.
T Consensus 152 ------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~~~-------------~~Il~~~~~~p~ 208 (612)
T KOG0603|consen 152 ------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--DTM-------------KRILKAELEMPR 208 (612)
T ss_pred ------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--HHH-------------HHHhhhccCCch
Confidence 117899999999998 557789999999999999999999964 111 111111233555
Q ss_pred HHHHHHHHHHHHhcccCCCCCC
Q 002289 850 ECVEKFIKLALKCCQDETDARP 871 (941)
Q Consensus 850 ~~~~~l~~l~~~c~~~~p~~RP 871 (941)
+.+.....++......+|..|-
T Consensus 209 ~l~~~a~~~~~~l~~r~p~nrL 230 (612)
T KOG0603|consen 209 ELSAEARSLFRQLFKRNPENRL 230 (612)
T ss_pred hhhHHHHHHHHHHHhhCHHHHh
Confidence 5666666666666656665553
No 429
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=1.1e-18 Score=178.38 Aligned_cols=140 Identities=19% Similarity=0.122 Sum_probs=110.2
Q ss_pred cceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh--------------------------hHhHHHHHHHHHhcCCCce
Q 002289 614 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--------------------------EKEFLTEIQFLSRLHHRNL 667 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~nI 667 (941)
...||+|+||.||+|...+|+.||||+++...... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999998789999999987542110 1123578999999999987
Q ss_pred eeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcCC
Q 002289 668 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHK 746 (941)
Q Consensus 668 v~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~~ 746 (941)
.....+... ..++||||++++++....... ..++......++.|++.++.++|+ .+ |+||||||+||+++ +
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-C
Confidence 544433322 248999999888654432222 246778889999999999999999 88 99999999999999 8
Q ss_pred CcEEEeeeccccccC
Q 002289 747 FTAKVADFGLSRLAP 761 (941)
Q Consensus 747 ~~~kl~DFGla~~~~ 761 (941)
+.++|+|||+|+...
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 899999999998654
No 430
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.78 E-value=1.3e-18 Score=207.32 Aligned_cols=224 Identities=24% Similarity=0.301 Sum_probs=176.2
Q ss_pred CCCCcceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCcc
Q 002289 77 MDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKL 156 (941)
Q Consensus 77 ~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 156 (941)
++....+|+.|+|++|+|+. +|.. .++|+.|+|++|.|+ .+|.. +.+|+.|+|++|+++ .+|.. +++|
T Consensus 237 LP~lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L 304 (788)
T PRK15387 237 LPALPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPVL---PPGL 304 (788)
T ss_pred CCCCCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhc---hhhcCEEECcCCccc-ccccc---cccc
Confidence 34456789999999999995 5542 468999999999998 56643 367889999999999 56653 4789
Q ss_pred ceeecccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCC
Q 002289 157 DRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNN 236 (941)
Q Consensus 157 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 236 (941)
+.|+|++|+|++ +|... .+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|
T Consensus 305 ~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N 372 (788)
T PRK15387 305 QELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNN 372 (788)
T ss_pred ceeECCCCcccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcc
Confidence 999999999995 45433 467889999999984 5642 2589999999999994 5653 357889999999
Q ss_pred cCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccc
Q 002289 237 NFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 316 (941)
Q Consensus 237 ~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 316 (941)
+|++ +|.. ..+|+.|+|++|+|++.++. ..+|+.|+|++|+|++ +|..+ .+|+.|++++|
T Consensus 373 ~L~~--LP~l---~~~L~~LdLs~N~Lt~LP~l-----------~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~N 432 (788)
T PRK15387 373 RLTS--LPAL---PSGLKELIVSGNRLTSLPVL-----------PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRN 432 (788)
T ss_pred cccc--Cccc---ccccceEEecCCcccCCCCc-----------ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccC
Confidence 9985 5654 35799999999999864331 1357999999999995 66543 46889999999
Q ss_pred cCccCCCcccccccccCccccceEEccCCCCCCC
Q 002289 317 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 350 (941)
Q Consensus 317 ~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~ 350 (941)
+|+ .+|..++.+. +|+.|+|++|+|+..
T Consensus 433 qLt-~LP~sl~~L~-----~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 433 QLT-RLPESLIHLS-----SETTVNLEGNPLSER 460 (788)
T ss_pred ccc-ccChHHhhcc-----CCCeEECCCCCCCch
Confidence 998 8999887654 556999999999864
No 431
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.77 E-value=1.8e-19 Score=210.03 Aligned_cols=253 Identities=19% Similarity=0.227 Sum_probs=180.5
Q ss_pred CCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCC-chhhHhHHHHHHH--HHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 610 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS-LQGEKEFLTEIQF--LSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+|...+.||++.|=+|.+|++++|. |+||++-... .-....|.++++- ...++|||.+++.-+-...+..|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5667889999999999999998887 8899876543 2223344443332 5556899999999888888888999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCC
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 766 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 766 (941)
.. -+|+|.+..+. .+...+.++|+.|++.||.-+|+.+ |+|||||.+|||+++-.-+.|+||..-+..-.+..+
T Consensus 103 vk-hnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 103 VK-HNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred Hh-hhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 95 59999996543 4788889999999999999999999 999999999999999999999999876533222211
Q ss_pred CccccccccccccCCCcccccccccC----------C-CCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHH-HHhh
Q 002289 767 GIVPAHVSTVVKGTPGYLDPEYFLTH----------K-LTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI-AYQS 833 (941)
Q Consensus 767 ~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~-~~~~ 833 (941)
................|.|||.+... . .+++-||||+||++.|+++ |++||.- ..+..+-.. .+..
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-SQL~aYr~~~~~~~ 255 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-SQLLAYRSGNADDP 255 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-HHHHhHhccCccCH
Confidence 11111112222344589999987541 1 5678999999999999999 6777741 111110000 0000
Q ss_pred ccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002289 834 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 880 (941)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 880 (941)
+...+. +++ ..+++++..|++.||.+|-+++++++.-
T Consensus 256 e~~Le~-------Ied---~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 256 EQLLEK-------IED---VSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HHHHHh-------CcC---ccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 000000 111 2578899999999999999999998773
No 432
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.77 E-value=9.6e-19 Score=209.89 Aligned_cols=232 Identities=27% Similarity=0.399 Sum_probs=185.7
Q ss_pred cceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceee
Q 002289 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (941)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (941)
..+++.|+|++|+|+ .+|..+. .+|+.|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. .+|+.|+
T Consensus 198 p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~ 268 (754)
T PRK15370 198 PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLD 268 (754)
T ss_pred ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEE
Confidence 346899999999999 4666554 58999999999999 5676554 47999999999999 7787664 5899999
Q ss_pred cccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCC
Q 002289 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (941)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 240 (941)
|++|+|+ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.|++
T Consensus 269 Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~ 339 (754)
T PRK15370 269 LFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS 339 (754)
T ss_pred CcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc
Confidence 9999999 5677664 589999999999994 565543 579999999999994 565443 689999999999985
Q ss_pred CCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCcc
Q 002289 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 320 (941)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 320 (941)
+|..+. ++|+.|+|++|+|+..+..+ ..+|+.|+|++|+|+ .+|..+. .+|+.|++++|+|+
T Consensus 340 --LP~~l~--~sL~~L~Ls~N~L~~LP~~l----------p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~- 401 (754)
T PRK15370 340 --LPASLP--PELQVLDVSKNQITVLPETL----------PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV- 401 (754)
T ss_pred --CChhhc--CcccEEECCCCCCCcCChhh----------cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-
Confidence 666654 79999999999998533211 246899999999999 4566554 37999999999998
Q ss_pred CCCcccccccccCccccceEEccCCCCCC
Q 002289 321 SIPSSIWQSRTLNATETFILDFQNNNLTN 349 (941)
Q Consensus 321 ~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~ 349 (941)
.+|..+..+... .+.+..|+|.+|.|+.
T Consensus 402 ~LP~sl~~~~~~-~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 402 RLPESLPHFRGE-GPQPTRIIVEYNPFSE 429 (754)
T ss_pred cCchhHHHHhhc-CCCccEEEeeCCCccH
Confidence 788877655432 3567899999999873
No 433
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=2.8e-18 Score=205.28 Aligned_cols=253 Identities=23% Similarity=0.279 Sum_probs=186.8
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcC---CCceeeeeeccccCCc
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGE 679 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~ 679 (941)
+.+...+.|.+.+.||+|+||+||+|...+|+.||+|+-+...... |.-=.+++.+|+ -+-|..+...+.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 5556778899999999999999999998889999999988755442 222234445554 2345555666666778
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc-------CCCcEEEe
Q 002289 680 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-------HKFTAKVA 752 (941)
Q Consensus 680 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~-------~~~~~kl~ 752 (941)
-+||+||.+.|||.+++. ....++|..++.++.|+++.+++||..+ |||+||||+|.|+. +...++|+
T Consensus 769 S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred ceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEE
Confidence 899999999999999996 4456899999999999999999999999 99999999999993 24469999
Q ss_pred eeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHh
Q 002289 753 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 832 (941)
Q Consensus 753 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~ 832 (941)
|||.+-.+..-. ........++|-.+-.+|...|..++...|.|.++.+++-|+.|+..= ..
T Consensus 844 DfG~siDm~lfp-----~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------------~~ 905 (974)
T KOG1166|consen 844 DFGRSIDMKLFP-----DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------------VK 905 (974)
T ss_pred ecccceeeeEcC-----CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------------hc
Confidence 999986543221 123456677899999999999999999999999999999999985421 01
Q ss_pred hccchhhhcCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 833 SSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 833 ~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
.+..+. +...+.. ...+.+.++..++ +..+...-|...++...++.++.
T Consensus 906 ~g~~~~-~~~~~~Ry~~~~~W~~~F~~l---LN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 906 NGSSWM-VKTNFPRYWKRDMWNKFFDLL---LNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred CCccee-ccccchhhhhHHHHHHHHHHH---hCcCcccchhHHHHHHHHHHHHH
Confidence 111111 1111122 2234455555444 44666667888888877777654
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=9.7e-21 Score=177.05 Aligned_cols=167 Identities=28% Similarity=0.508 Sum_probs=104.9
Q ss_pred cCCccccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccceEecccccccccCchhccCCCccc
Q 002289 126 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 205 (941)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 205 (941)
+.++.+.+.|.||+|+++ .+|+.++.|.+|+.|++++|+|+ .+|..++.+++|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-------------------------~lp~~issl~klr 82 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-------------------------ELPTSISSLPKLR 82 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-------------------------hcChhhhhchhhh
Confidence 334555566666666666 45555555555555555555555 4455555555555
Q ss_pred eeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcC
Q 002289 206 HMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNIT 285 (941)
Q Consensus 206 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~ 285 (941)
.|+++-|++. ..|..|+.++.|+.|||..|++....+|..|..++.|+.|+|++|.++-.+|++..+.++ +
T Consensus 83 ~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~l--------q 153 (264)
T KOG0617|consen 83 ILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNL--------Q 153 (264)
T ss_pred heecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcce--------e
Confidence 5555555555 556666666666666666666665566666666666666666666666555554444332 5
Q ss_pred EEEccCCcCCCCcchhhcCCcccceeecccccCccCCCcccccc
Q 002289 286 TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQS 329 (941)
Q Consensus 286 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (941)
.|.+..|.+- .+|..++.+.+|++|++.+|+++ .+|..++++
T Consensus 154 il~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 154 ILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred EEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 5666666655 67888888888888888888888 777776543
No 435
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.4e-18 Score=180.58 Aligned_cols=201 Identities=22% Similarity=0.287 Sum_probs=144.9
Q ss_pred CCCceeeeeecccc---------------------------CCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHH
Q 002289 663 HHRNLVSLVGYCDE---------------------------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALG 715 (941)
Q Consensus 663 ~h~nIv~l~~~~~~---------------------------~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 715 (941)
+|||||++.++|.+ ....|+||.-+ ..+|.+++-.+. .+.-...-|..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999987743 23579999988 469999996543 445556678899
Q ss_pred HHHHHHHhhcCCCCCeEeccCCCCcEEE--cCCC--cEEEeeeccccccCCCCCCCccc-cccccccccCCCcccccccc
Q 002289 716 SSRGILYLHTEADPPVFHRDIKASNILL--DHKF--TAKVADFGLSRLAPVPDIEGIVP-AHVSTVVKGTPGYLDPEYFL 790 (941)
Q Consensus 716 ia~gL~yLH~~~~~~ivH~DLkp~NILl--~~~~--~~kl~DFGla~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~ 790 (941)
+++|+.|||+++ |.|||+|++|||+ |+|+ ...|+|||++--...... ..+ .......-|...-||||+..
T Consensus 350 lLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGl--qlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 350 LLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGL--QLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeecccccc--ccccccccccCCCcceecchhhhh
Confidence 999999999999 9999999999999 3443 678899998642211000 000 11122344677899999986
Q ss_pred cCC------CCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcc
Q 002289 791 THK------LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQ 864 (941)
Q Consensus 791 ~~~------~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~ 864 (941)
..+ --.|+|.|+.|.+.||+++...||.......-..+ .++ ...++..|+.++....+++...++
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r-~Yq--------e~qLPalp~~vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR-TYQ--------ESQLPALPSRVPPVARQLVFDLLK 495 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh-hhh--------hhhCCCCcccCChHHHHHHHHHhc
Confidence 532 12489999999999999999999976332111111 122 234567788899999999999999
Q ss_pred cCCCCCCCHHHHHHHHH
Q 002289 865 DETDARPSMSEVMRELE 881 (941)
Q Consensus 865 ~~p~~RPs~~~v~~~L~ 881 (941)
.+|.+|++..-....++
T Consensus 496 r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVLN 512 (598)
T ss_pred CCccccCCccHHHhHHH
Confidence 99999998875555443
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=1e-20 Score=176.86 Aligned_cols=166 Identities=26% Similarity=0.531 Sum_probs=132.7
Q ss_pred ccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccc
Q 002289 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (941)
Q Consensus 102 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (941)
+.++.+++.|.||+|+++ .+|..+..+.+|+.|++++|+++ .+|..++.+++|+.|+++-|++. +.|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445667777778888887 56667778888888888888887 77777888888888888888777 7788888888888
Q ss_pred eEeccccccc-ccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccC
Q 002289 182 HFHMNNNSIS-GQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN 260 (941)
Q Consensus 182 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~ 260 (941)
.|+|..|+++ ..+|..|..+..|+-|+|++|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|++|.+.+
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll--~lpkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL--SLPKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh--hCcHHHHHHHHHHHHhccc
Confidence 8888888775 356888888888888888888888 78888888999999999888886 5888888888888888888
Q ss_pred CCCcCCCCCCCCC
Q 002289 261 CSLQGPMPDLSRI 273 (941)
Q Consensus 261 N~l~~~~~~~~~l 273 (941)
|+++-.+|++..+
T Consensus 183 nrl~vlppel~~l 195 (264)
T KOG0617|consen 183 NRLTVLPPELANL 195 (264)
T ss_pred ceeeecChhhhhh
Confidence 8888777765443
No 437
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=1.4e-18 Score=195.14 Aligned_cols=216 Identities=26% Similarity=0.424 Sum_probs=161.8
Q ss_pred HHhcCCCceeeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCe-EeccCC
Q 002289 659 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPV-FHRDIK 737 (941)
Q Consensus 659 l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i-vH~DLk 737 (941)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+.. ....+++.....++++|+.||+|+|+.. | .|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~---i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP---IGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc---ceeeeeec
Confidence 4578999999999999999999999999999999999965 4456999999999999999999999765 5 899999
Q ss_pred CCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCC-------CCchhHhHHHHHHHHHH
Q 002289 738 ASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-------LTDKSDVYSLGVVFLEL 810 (941)
Q Consensus 738 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDVwSlG~ll~el 810 (941)
++|+++|....+|++|||+......... ........-..-|.|||.+.+.. .+.+.||||||++++|+
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~-----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAE-----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred cccceeeeeEEEEechhhhccccccccc-----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 9999999999999999999876642100 00111112335799999997631 46679999999999999
Q ss_pred HhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCC-h-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002289 811 LTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP-S-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 885 (941)
Q Consensus 811 ltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 885 (941)
++.+.||.......+.......... .-....++... . +..+.+..++..||..+|.+||++.++...++.+..
T Consensus 152 ~~r~~~~~~~~~~~~~~eii~~~~~--~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 152 LFRSGPFDLRNLVEDPDEIILRVKK--GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HhccCccccccccCChHHHHHHHHh--cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 9999999754332221111111000 00001112211 1 444578899999999999999999999888876654
No 438
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.75 E-value=2.1e-17 Score=211.98 Aligned_cols=262 Identities=23% Similarity=0.270 Sum_probs=175.0
Q ss_pred ceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeec
Q 002289 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (941)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (941)
.+++.|+|.++.+. .++..+..+++|+.|+|++|...+.+| .++.+++|++|+|++|.....+|..+.++++|+.|+|
T Consensus 611 ~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L 688 (1153)
T PLN03210 611 ENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDM 688 (1153)
T ss_pred cCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeC
Confidence 45666677666665 355566667777777777665444555 3666777777777776655567777777777777777
Q ss_pred ccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccC-------------------
Q 002289 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPEL------------------- 222 (941)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~------------------- 222 (941)
++|..-+.+|..+ ++++|+.|+|++|...+.+|.. ..+|++|+|++|.+. .+|..+
T Consensus 689 ~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~ 763 (1153)
T PLN03210 689 SRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLW 763 (1153)
T ss_pred CCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhcc
Confidence 7654434555544 5667777777766544444432 346667777777765 334321
Q ss_pred -----------CCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccC
Q 002289 223 -----------SELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSN 291 (941)
Q Consensus 223 -----------~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~ 291 (941)
...++|+.|+|++|...+ .+|..++++++|+.|+|++|..-+.+|... .+.+|+.|+|++
T Consensus 764 ~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~-~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~--------~L~sL~~L~Ls~ 834 (1153)
T PLN03210 764 ERVQPLTPLMTMLSPSLTRLFLSDIPSLV-ELPSSIQNLHKLEHLEIENCINLETLPTGI--------NLESLESLDLSG 834 (1153)
T ss_pred ccccccchhhhhccccchheeCCCCCCcc-ccChhhhCCCCCCEEECCCCCCcCeeCCCC--------CccccCEEECCC
Confidence 112467788888887665 588889999999999998875433344321 235678999998
Q ss_pred CcCCCCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccC-CCCCCCCCCC-CCCCCcEEEecCCC
Q 002289 292 NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQN-NNLTNISGSF-NIPPNVTVRLRGNP 368 (941)
Q Consensus 292 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~-N~l~~~~~~~-~~~~~~~l~l~~Np 368 (941)
|..-..+|.. .++|+.|+|++|.|+ .+|.++..+ ++|+.|+|++ |+|+.++... .++.+..+++++++
T Consensus 835 c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l-----~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 835 CSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKF-----SNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCcccccccc---ccccCEeECCCCCCc-cChHHHhcC-----CCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 8655455543 357899999999998 788877654 4567999988 8888887665 56777788877553
No 439
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=2.5e-17 Score=169.16 Aligned_cols=136 Identities=17% Similarity=0.202 Sum_probs=106.0
Q ss_pred CccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhc-----CCCceeeeeeccccCC---c-EEE
Q 002289 612 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-----HHRNLVSLVGYCDEEG---E-QML 682 (941)
Q Consensus 612 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~---~-~~L 682 (941)
...+.||+|+||.||. .-+++.. +||+.........+.+.+|+++++.+ .||||++++|++.++. . ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3467899999999996 2224444 69988765444567899999999999 5799999999997763 3 337
Q ss_pred EEec--CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHH-HHhhcCCCCCeEeccCCCCcEEEcC----CCcEEEeeec
Q 002289 683 VYEF--MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI-LYLHTEADPPVFHRDIKASNILLDH----KFTAKVADFG 755 (941)
Q Consensus 683 V~e~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivH~DLkp~NILl~~----~~~~kl~DFG 755 (941)
|+|| +++|+|.+++.+. .+++. ..++.+++.++ +|||+++ |+||||||+|||++. ++.++|+||+
T Consensus 83 I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 8999 5579999999553 25554 34577888777 9999999 999999999999974 3489999955
Q ss_pred cc
Q 002289 756 LS 757 (941)
Q Consensus 756 la 757 (941)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
No 440
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.73 E-value=9.6e-20 Score=209.49 Aligned_cols=252 Identities=25% Similarity=0.313 Sum_probs=205.9
Q ss_pred CcceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCcccee
Q 002289 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (941)
Q Consensus 80 ~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 159 (941)
.+.+++.++++.|++++ +|..++.+.+|+.|+..+|+|. .+|..+...++|+.|++..|.+. -+|.....+++|++|
T Consensus 239 ~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tL 315 (1081)
T KOG0618|consen 239 VPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTL 315 (1081)
T ss_pred ccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeee
Confidence 45679999999999995 5699999999999999999996 89999999999999999999999 888899999999999
Q ss_pred ecccccccccCCcccccccc-cceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcC
Q 002289 160 QIDQNYISGSLPKSFANLNK-TRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF 238 (941)
Q Consensus 160 ~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 238 (941)
+|..|+|....+..|.-+.. |..|+.+.|.++...--.=..++.|+.|++.+|.|+...-+.+.+..+|+.|+|++|+|
T Consensus 316 dL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL 395 (1081)
T KOG0618|consen 316 DLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRL 395 (1081)
T ss_pred eehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccc
Confidence 99999999444434444444 78888899998833311123467899999999999988888899999999999999999
Q ss_pred CCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccC
Q 002289 239 EGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL 318 (941)
Q Consensus 239 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 318 (941)
.. .....+.++..|++|+||+|+|+..+..+.. ...|++|...+|+|. ..| .+..+++|+.+|++.|+|
T Consensus 396 ~~-fpas~~~kle~LeeL~LSGNkL~~Lp~tva~--------~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L 464 (1081)
T KOG0618|consen 396 NS-FPASKLRKLEELEELNLSGNKLTTLPDTVAN--------LGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNL 464 (1081)
T ss_pred cc-CCHHHHhchHHhHHHhcccchhhhhhHHHHh--------hhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchh
Confidence 85 3445689999999999999999854433322 344689999999998 667 899999999999999999
Q ss_pred ccC-CCcccccccccCccccceEEccCCCCCCCC
Q 002289 319 SGS-IPSSIWQSRTLNATETFILDFQNNNLTNIS 351 (941)
Q Consensus 319 ~~~-~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~ 351 (941)
+.. +|.. +..++|++|||+||.-..++
T Consensus 465 ~~~~l~~~------~p~p~LkyLdlSGN~~l~~d 492 (1081)
T KOG0618|consen 465 SEVTLPEA------LPSPNLKYLDLSGNTRLVFD 492 (1081)
T ss_pred hhhhhhhh------CCCcccceeeccCCcccccc
Confidence 832 2332 23378999999999854443
No 441
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.73 E-value=3.6e-17 Score=173.28 Aligned_cols=230 Identities=21% Similarity=0.253 Sum_probs=144.2
Q ss_pred CccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---hHhHHHHHHHHHhcCC----------Cceeeeeecc---
Q 002289 612 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHH----------RNLVSLVGYC--- 674 (941)
Q Consensus 612 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h----------~nIv~l~~~~--- 674 (941)
...+.||.|+++.||.+++. +|+.+|||++....... -+++.+|.-....+.+ -.++..++..
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 34678999999999999976 58999999876433222 2455566544444322 1122111111
Q ss_pred ------ccC---C-----cEEEEEecCCCCCHHHHHhh---c--CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 002289 675 ------DEE---G-----EQMLVYEFMSNGTLRDQLSA---K--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 735 (941)
Q Consensus 675 ------~~~---~-----~~~LV~e~~~~gsL~~~l~~---~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 735 (941)
... . ..+++|+-+ -++|.+++.. . ....+....++.+..|+++.+++||+.| ++|+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecc
Confidence 111 1 236788888 5799887642 2 2234566777888999999999999999 99999
Q ss_pred CCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCccccccccc--------CCCCchhHhHHHHHHH
Q 002289 736 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--------HKLTDKSDVYSLGVVF 807 (941)
Q Consensus 736 Lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDVwSlG~ll 807 (941)
|||+|++++.+|.++|+||+....... .......+..|.+||.... ..++.+.|.|++|+++
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~----------~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGT----------RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTE----------EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCc----------eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 999999999999999999998765421 1111334578999997744 2478899999999999
Q ss_pred HHHHhCCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCC
Q 002289 808 LELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR 870 (941)
Q Consensus 808 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R 870 (941)
|.|.+|..||........ ... ....-. +.++.+..++...++.+|.+|
T Consensus 241 y~lWC~~lPf~~~~~~~~-------~~~-------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEAD-------PEW-------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGST-------SGG-------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCcccc-------ccc-------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999999999975432110 000 111112 566777778888887777766
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=1.3e-19 Score=201.55 Aligned_cols=279 Identities=19% Similarity=0.224 Sum_probs=170.5
Q ss_pred EEEecCCCCCc-cCCccccCCCCCCEEEcccCCCCC----CCCCccCCccccceecccCccccC------CCCcccCCcC
Q 002289 86 ELQLLNLNLSG-NLSPEIGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTG------SLPEELGYLP 154 (941)
Q Consensus 86 ~L~L~~~~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~ 154 (941)
.|+|.++++++ .....+..+.+|+.|++++|.++. .++..+...++|++|++++|.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 35666666663 344455666777777777777743 244455566677777777777662 2334566677
Q ss_pred ccceeecccccccccCCcccccccc---cceEecccccccc----cCchhccCC-CccceeeccCCcCCCC----CCccC
Q 002289 155 KLDRIQIDQNYISGSLPKSFANLNK---TRHFHMNNNSISG----QIPPELSRL-PSLVHMLLDNNNLTGY----LPPEL 222 (941)
Q Consensus 155 ~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~~~ 222 (941)
+|+.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 7888888887777656666655555 8888888887763 223344555 7778888888887732 23345
Q ss_pred CCCCCCCEEeccCCcCCCCC---cchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcc
Q 002289 223 SELPKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIP 299 (941)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p 299 (941)
..+++|+.|+|++|.+++.. ++..+..+++|++|+|++|.+++.... .+.. .+....+|++|++++|.+++...
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~--~l~~-~~~~~~~L~~L~ls~n~l~~~~~ 238 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS--ALAE-TLASLKSLEVLNLGDNNLTDAGA 238 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH--HHHH-HhcccCCCCEEecCCCcCchHHH
Confidence 66677888888888776422 233455556788888888877532111 0000 01122456888888888776444
Q ss_pred hhhcC-----CcccceeecccccCccCCCccccc-ccccCccccceEEccCCCCCCCCCC-----C--CCCCCcEEEecC
Q 002289 300 SNFSG-----LPRLQRLFIANNSLSGSIPSSIWQ-SRTLNATETFILDFQNNNLTNISGS-----F--NIPPNVTVRLRG 366 (941)
Q Consensus 300 ~~~~~-----l~~L~~L~Ls~N~l~~~~p~~~~~-l~~l~~~~L~~L~Ls~N~l~~~~~~-----~--~~~~~~~l~l~~ 366 (941)
..+.. .++|+.|++++|.++......+.. +.. .++|+.+|+++|.++.-+.. . ..+.+..+++.+
T Consensus 239 ~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~--~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (319)
T cd00116 239 AALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAE--KESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKD 316 (319)
T ss_pred HHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhc--CCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCC
Confidence 33332 367888888888876222222211 111 25677888888888754211 1 225678888888
Q ss_pred CCC
Q 002289 367 NPF 369 (941)
Q Consensus 367 Np~ 369 (941)
|||
T Consensus 317 ~~~ 319 (319)
T cd00116 317 DSF 319 (319)
T ss_pred CCC
Confidence 887
No 443
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.72 E-value=2.7e-19 Score=187.93 Aligned_cols=286 Identities=18% Similarity=0.169 Sum_probs=213.2
Q ss_pred CCceEecCCCCCCCcceeeEEEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCC
Q 002289 67 WTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSL 146 (941)
Q Consensus 67 w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 146 (941)
..+-+|.+.. =..++-++-+|+ .+|..+ -..-+.++|..|+|+.+.|.+|+.+++|+.||||+|.|+.+-
T Consensus 38 P~pC~Cs~~~-------g~~VdCr~~GL~-eVP~~L--P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~ 107 (498)
T KOG4237|consen 38 PAPCTCSDVE-------GGIVDCRGKGLT-EVPANL--PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIA 107 (498)
T ss_pred CCCcccCCCC-------CceEEccCCCcc-cCcccC--CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcC
Confidence 3466665432 134666676776 355443 245688999999999888899999999999999999999999
Q ss_pred CcccCCcCccceeeccc-ccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCC
Q 002289 147 PEELGYLPKLDRIQIDQ-NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSEL 225 (941)
Q Consensus 147 p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 225 (941)
|++|.++++|..|-+.+ |+|+....+.|.+|..|+.|.+.-|++.-...+.|..+++|..|.+-+|.+...-...|..+
T Consensus 108 p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l 187 (498)
T KOG4237|consen 108 PDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGL 187 (498)
T ss_pred hHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccch
Confidence 99999999998887776 99997777889999999999999999998888899999999999999999995444589999
Q ss_pred CCCCEEeccCCcCCCC-----------CcchhccCCCCCcEEEccCCCCcCCCCCCCCCCccccccc-CCc-CEEEccCC
Q 002289 226 PKLLILQLDNNNFEGT-----------TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLS-LNI-TTIKLSNN 292 (941)
Q Consensus 226 ~~L~~L~Ls~N~l~~~-----------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~-~~L-~~L~Ls~N 292 (941)
.+++.+.+..|.+... ..|-.++...-..-..|.++++....+ -.|... ..+ ..+....+
T Consensus 188 ~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a-------~kf~c~~esl~s~~~~~d~ 260 (498)
T KOG4237|consen 188 AAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDA-------RKFLCSLESLPSRLSSEDF 260 (498)
T ss_pred hccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccch-------hhhhhhHHhHHHhhccccC
Confidence 9999999999985320 112223333333333333333332211 111111 011 22233344
Q ss_pred cCCCCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCCCCCCCCC--CCCCCcEEEecCCCCc
Q 002289 293 KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFC 370 (941)
Q Consensus 293 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~~~--~~~~~~~l~l~~Np~~ 370 (941)
...--....|..|++|+.|+|++|+|++.-+.+|..+.. ++.|.|..|+|..+...+ .+..+.+|+|.||.+.
T Consensus 261 ~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~-----l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it 335 (498)
T KOG4237|consen 261 PDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAE-----LQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQIT 335 (498)
T ss_pred cCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhh-----hhhhhcCcchHHHHHHHhhhccccceeeeecCCeeE
Confidence 444344567999999999999999999888888877544 568999999999997666 6788999999999998
Q ss_pred cCCC
Q 002289 371 LNTN 374 (941)
Q Consensus 371 c~c~ 374 (941)
|-..
T Consensus 336 ~~~~ 339 (498)
T KOG4237|consen 336 TVAP 339 (498)
T ss_pred EEec
Confidence 8654
No 444
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.72 E-value=2.8e-18 Score=200.46 Aligned_cols=172 Identities=28% Similarity=0.450 Sum_probs=122.4
Q ss_pred hcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..+|+.++.|-.|+||.||..+++ ..+.+|.|+-+. .. +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq-~l-----ilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ-NL-----ILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhccccc-ch-----hhhc--cccccCCccee------------------
Confidence 457788899999999999999876 467788854332 11 1110 22222333333
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCC---
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP--- 763 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~--- 763 (941)
|+-.+.+..-+..+.+ . +.+++|||+.+ |+|||+||+|.+|+.-|.+|++|||+++.--..
T Consensus 136 ---gDc~tllk~~g~lPvd--m--------vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGPLPVD--M--------VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccCCCCcch--h--------hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 4555555433333322 2 67899999999 999999999999999999999999998642111
Q ss_pred -----CCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCc
Q 002289 764 -----DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 821 (941)
Q Consensus 764 -----~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~ 821 (941)
.++.....-....++||+.|+|||++..+.|...+|+|++|+++||.+-|+.||+.+.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC
Confidence 1111111112234689999999999999999999999999999999999999998653
No 445
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=4.9e-19 Score=196.93 Aligned_cols=263 Identities=19% Similarity=0.208 Sum_probs=196.8
Q ss_pred eeeEEEecCCCCCcc----CCccccCCCCCCEEEcccCCCCC------CCCCccCCccccceecccCccccCCCCcccCC
Q 002289 83 HLRELQLLNLNLSGN----LSPEIGRLSYLTILDFMWNKISG------SIPKEIGNIKSLELLLLNGNELTGSLPEELGY 152 (941)
Q Consensus 83 ~l~~L~L~~~~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 152 (941)
+++.|++.++.++.. ++..+...+.|++|+++++.+.+ .++..+..+++|++|+|++|.+.+..+..+..
T Consensus 24 ~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~ 103 (319)
T cd00116 24 CLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLES 103 (319)
T ss_pred hccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHH
Confidence 489999999998653 56677788899999999998873 23456777889999999999998777766666
Q ss_pred cCc---cceeecccccccc----cCCcccccc-cccceEeccccccccc----CchhccCCCccceeeccCCcCCCC---
Q 002289 153 LPK---LDRIQIDQNYISG----SLPKSFANL-NKTRHFHMNNNSISGQ----IPPELSRLPSLVHMLLDNNNLTGY--- 217 (941)
Q Consensus 153 l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~--- 217 (941)
+.+ |++|++++|.+++ .+...+..+ ++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++.
T Consensus 104 l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 183 (319)
T cd00116 104 LLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIR 183 (319)
T ss_pred HhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHH
Confidence 665 9999999999883 334456677 8999999999999843 344566778999999999999843
Q ss_pred -CCccCCCCCCCCEEeccCCcCCCC---CcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCc
Q 002289 218 -LPPELSELPKLLILQLDNNNFEGT---TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNK 293 (941)
Q Consensus 218 -~p~~~~~l~~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~ 293 (941)
++..+..+++|+.|+|++|.+++. .+...+..+++|++|++++|.+++.... .+..........|++|++++|.
T Consensus 184 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~--~l~~~~~~~~~~L~~L~l~~n~ 261 (319)
T cd00116 184 ALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA--ALASALLSPNISLLTLSLSCND 261 (319)
T ss_pred HHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH--HHHHHHhccCCCceEEEccCCC
Confidence 344566678999999999998752 1345677889999999999998741110 0100000123578999999999
Q ss_pred CC----CCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCC
Q 002289 294 LT----GTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 347 (941)
Q Consensus 294 l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l 347 (941)
++ ..+...+..+++|++|++++|.++..-...+.....-...+|+.||+.+|.+
T Consensus 262 i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 262 ITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 97 2345667778899999999999985544444443333336788999998864
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=2.1e-16 Score=164.60 Aligned_cols=134 Identities=20% Similarity=0.330 Sum_probs=113.3
Q ss_pred ceeeccCcEEEEEEEeCCCcEEEEEEeccCCch--------hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 615 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
+.||+|++|.||+|.+ +|..|++|+....... ....+.+|++++..++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6778999986543221 123578899999999999988777777777788999999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
++|++|.+++.... . .+..++.+++.+|.++|+.+ ++|||++|+||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999985432 1 77889999999999999999 99999999999999 78999999998864
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=3.5e-16 Score=161.12 Aligned_cols=143 Identities=19% Similarity=0.183 Sum_probs=111.7
Q ss_pred HHHHHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCch----------------------hhHhHHHHHHHHH
Q 002289 603 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----------------------GEKEFLTEIQFLS 660 (941)
Q Consensus 603 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 660 (941)
++......|.+.+.||+|+||.||+|..++|+.||||++...... ....+..|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 333333447888999999999999999888999999987642210 0123577899999
Q ss_pred hcCCC--ceeeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCC
Q 002289 661 RLHHR--NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 738 (941)
Q Consensus 661 ~l~h~--nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp 738 (941)
.+.|+ .+.+.++. ...++||||+++++|.++... .....++.+++.++.++|+.+ |+||||||
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p 153 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG---IIHGDLSE 153 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCc
Confidence 99877 44444442 355899999999999776421 234568899999999999998 99999999
Q ss_pred CcEEEcCCCcEEEeeecccccc
Q 002289 739 SNILLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 739 ~NILl~~~~~~kl~DFGla~~~ 760 (941)
+||+++++++++|+|||.+...
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred ccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999999654
No 448
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=2.8e-16 Score=165.45 Aligned_cols=142 Identities=20% Similarity=0.159 Sum_probs=110.3
Q ss_pred CCCccceeeccCcEEEEEEE--eCCCcEEEEEEeccCCch------------------------hhHhHHHHHHHHHhcC
Q 002289 610 NFNSSTQIGQGGYGKVYKGI--LPDGTVVAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 663 (941)
Q Consensus 610 ~y~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 663 (941)
-|++.+.||+|+||.||+|. ..+|+.||+|+++..... ....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36778899999999999998 468999999998753210 0123568999999997
Q ss_pred CC--ceeeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcE
Q 002289 664 HR--NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 741 (941)
Q Consensus 664 h~--nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NI 741 (941)
+. .+.+++++ ...++||||+++++|....... ..........++.|++.++++||+.+. |+||||||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~--iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGE--LVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCC--EEeCCCChhhE
Confidence 53 34444443 2358999999998887654222 235566678899999999999998763 99999999999
Q ss_pred EEcCCCcEEEeeecccccc
Q 002289 742 LLDHKFTAKVADFGLSRLA 760 (941)
Q Consensus 742 Ll~~~~~~kl~DFGla~~~ 760 (941)
+++ +++++|+|||.|...
T Consensus 181 li~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEE-CCCEEEEEChhhhcc
Confidence 999 889999999998754
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=4e-16 Score=160.92 Aligned_cols=130 Identities=22% Similarity=0.337 Sum_probs=106.4
Q ss_pred eeeccCcEEEEEEEeCCCcEEEEEEeccCCch--------hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecC
Q 002289 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 687 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 687 (941)
.||+|+||.||+|.+ +|..|++|+....... ...++.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 379999999999995 6788999986542211 1246778999999999887665555555666779999999
Q ss_pred CCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 688 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 688 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
+|++|.+++..... .++.+++++|.+||+.+ ++|||++|+||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998754211 78999999999999999 99999999999999 88999999999875
No 450
>PLN03150 hypothetical protein; Provisional
Probab=99.66 E-value=3.7e-16 Score=187.16 Aligned_cols=144 Identities=37% Similarity=0.589 Sum_probs=104.4
Q ss_pred CCCCCHHHHHHHHHHHHhCcCCCCCCCCCCCCCCCC---CCCCceEecCCCCCCCcceeeEEEecCCCCCccCCccccCC
Q 002289 29 DSITDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCT---SNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRL 105 (941)
Q Consensus 29 ~~~~~~~d~~aL~~~k~~~~~~~~~~~~w~~~~~c~---~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l 105 (941)
...+.+.|..||+.+|+++.++. ..+|+ +++|+ +.|.||.|..... .....++.|+|++|++.|.+|+.|+.|
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~~~~--~~~W~-g~~C~p~~~~w~Gv~C~~~~~-~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLGLPL--RFGWN-GDPCVPQQHPWSGADCQFDST-KGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred ccccCchHHHHHHHHHHhcCCcc--cCCCC-CCCCCCcccccccceeeccCC-CCceEEEEEECCCCCccccCCHHHhCC
Confidence 34567889999999999997543 24796 57774 4799999953211 112357788888888888887777777
Q ss_pred CCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecccccccccCCccccc
Q 002289 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFAN 176 (941)
Q Consensus 106 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 176 (941)
++|+.|+|++|+|.|.+|..++.+++|+.|+|++|+++|.+|..+++|++|+.|+|++|+++|.+|..+..
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~ 512 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGG 512 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhh
Confidence 77888887777777777777777777777777777777777777777777777777777666666665543
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.65 E-value=6e-16 Score=183.58 Aligned_cols=143 Identities=20% Similarity=0.264 Sum_probs=114.0
Q ss_pred HHHHHHhcCCCccceeeccCcEEEEEEEeCCCcEEEEEE-eccC-Cc------hhhHhHHHHHHHHHhcCCCceeeeeec
Q 002289 602 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKR-AQEG-SL------QGEKEFLTEIQFLSRLHHRNLVSLVGY 673 (941)
Q Consensus 602 ~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~-~~~~-~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~ 673 (941)
.........|...+.||+|+||+||+|.+.+.. +++|+ .... .. ...+.+.+|+++++.++|++++....+
T Consensus 326 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 404 (535)
T PRK09605 326 IKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIY 404 (535)
T ss_pred ccccccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEE
Confidence 333334455677899999999999999875443 33333 2211 11 113468899999999999999988877
Q ss_pred cccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEee
Q 002289 674 CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 753 (941)
Q Consensus 674 ~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~D 753 (941)
+......++||||+++++|.+++. ....++.+++++|.|||+.+ ++||||||+||++ +++.++|+|
T Consensus 405 ~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liD 470 (535)
T PRK09605 405 DVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLID 470 (535)
T ss_pred EEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEe
Confidence 777778899999999999999884 35678999999999999999 9999999999999 678999999
Q ss_pred eccccc
Q 002289 754 FGLSRL 759 (941)
Q Consensus 754 FGla~~ 759 (941)
||+++.
T Consensus 471 FGla~~ 476 (535)
T PRK09605 471 FGLGKY 476 (535)
T ss_pred Cccccc
Confidence 999874
No 452
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.62 E-value=1.6e-16 Score=174.84 Aligned_cols=128 Identities=27% Similarity=0.401 Sum_probs=108.5
Q ss_pred CcEEEEEecCCCCCHHHHHhh-cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecc
Q 002289 678 GEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 756 (941)
Q Consensus 678 ~~~~LV~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGl 756 (941)
...++.|++|.-.+|.+|+.+ ......++...+.++.|++.|++| ++ .+|+|+||.||+...+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhh
Confidence 357899999999999999974 344567888899999999999999 67 89999999999999999999999999
Q ss_pred ccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHh
Q 002289 757 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 812 (941)
Q Consensus 757 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt 812 (941)
........ +...+....+...||..||+||.+.+..|+.++||||||++++|++.
T Consensus 403 ~ts~~~~~-~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDE-TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCC-cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 87654432 11112334566789999999999999999999999999999999996
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=1e-14 Score=142.52 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=114.1
Q ss_pred ccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCC--CceeeeeeccccCCcEEEEEecCCCC
Q 002289 613 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLVYEFMSNG 690 (941)
Q Consensus 613 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~LV~e~~~~g 690 (941)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++.++++++...+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35789999999999999854 7899998865433 4578899999999976 58999999988888999999999887
Q ss_pred CHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 691 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 691 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
.+..+ +......++.+++++++++|......++|+|++|+||++++.+.+++.|||.++.
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77543 4456677899999999999986444599999999999999999999999999864
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.3e-14 Score=148.06 Aligned_cols=136 Identities=23% Similarity=0.212 Sum_probs=98.1
Q ss_pred cceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh--hHh----------------------HHHHHHHHHhcCCCc--e
Q 002289 614 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKE----------------------FLTEIQFLSRLHHRN--L 667 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--I 667 (941)
.+.||+|+||+||+|...+++.||||++....... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999887532211 111 134566666664432 4
Q ss_pred eeeeeccccCCcEEEEEecCCCCCHHH-HHhhcCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCCeEeccCCCCcEEEcC
Q 002289 668 VSLVGYCDEEGEQMLVYEFMSNGTLRD-QLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDH 745 (941)
Q Consensus 668 v~l~~~~~~~~~~~LV~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~DLkp~NILl~~ 745 (941)
.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++|. .+ |+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence 444443 24589999999854322 111111 11 5577899999999999999 88 99999999999999
Q ss_pred CCcEEEeeeccccccC
Q 002289 746 KFTAKVADFGLSRLAP 761 (941)
Q Consensus 746 ~~~~kl~DFGla~~~~ 761 (941)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8999999999997543
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=1.4e-15 Score=179.49 Aligned_cols=263 Identities=21% Similarity=0.237 Sum_probs=193.5
Q ss_pred hcCCCccceeeccCcEEEEEEEeC--CCcEEEEEEeccCC--chhhHhHHHHHHHHHhcC-CCceeeeeeccccCCcEEE
Q 002289 608 TNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 608 ~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~L 682 (941)
...|...+.||+|+|+.|-..... ....+|+|.+.... .........|..+-+.+. |+|++.+++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 345677788999999999887753 34567777665432 222334455777777776 9999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhh-cCCCCCeEeccCCCCcEEEcCCC-cEEEeeecccccc
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-TEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLA 760 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~DLkp~NILl~~~~-~~kl~DFGla~~~ 760 (941)
+++|..++++.+-+........+....-.+..|+..++.|+| ..+ +.|+|+||+|.+++..+ ..+++|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999999999999883222223455556678999999999999 888 99999999999999999 9999999999877
Q ss_pred CC-CCCCCcccccccccccc-CCCcccccccccC-CCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhccch
Q 002289 761 PV-PDIEGIVPAHVSTVVKG-TPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 837 (941)
Q Consensus 761 ~~-~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~~~ 837 (941)
.. ... ........| ++.|+|||...+. -.....|+||.|+++.-+++|..|+........ ..
T Consensus 176 ~~~~g~-----~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---------~~- 240 (601)
T KOG0590|consen 176 RNKNGA-----ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---------RY- 240 (601)
T ss_pred cccCCc-----ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---------cc-
Confidence 54 221 223344567 9999999999884 445679999999999999999999864332110 00
Q ss_pred hhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCccCCC
Q 002289 838 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 917 (941)
Q Consensus 838 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa~e~L~ 917 (941)
...+..| .|.+ ...+........+++.+++..+|..|.+.+++-.
T Consensus 241 ------------------~~~~~~~------~~~~-----------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 241 ------------------SSWKSNK------GRFT-----------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ------------------eeecccc------cccc-----------cCccccCChhhhhcccccccCCchhccccccccc
Confidence 0000000 0000 0112233455668899999999999999999999
Q ss_pred CCCCCC
Q 002289 918 HPYVSS 923 (941)
Q Consensus 918 Hpwf~~ 923 (941)
|||+..
T Consensus 286 d~~~~~ 291 (601)
T KOG0590|consen 286 DNWLSS 291 (601)
T ss_pred cccccc
Confidence 999988
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.52 E-value=1e-13 Score=146.36 Aligned_cols=135 Identities=23% Similarity=0.294 Sum_probs=104.9
Q ss_pred cceee-ccCcEEEEEEEeCCCcEEEEEEeccCCc-------------hhhHhHHHHHHHHHhcCCCce--eeeeeccccC
Q 002289 614 STQIG-QGGYGKVYKGILPDGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNL--VSLVGYCDEE 677 (941)
Q Consensus 614 ~~~lG-~G~fg~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nI--v~l~~~~~~~ 677 (941)
...|| .|+.|+||.+... +..+|||++..... .....+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999999874 67889998753211 123467889999999998875 6677764332
Q ss_pred -C---cEEEEEecCCC-CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEe
Q 002289 678 -G---EQMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 752 (941)
Q Consensus 678 -~---~~~LV~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~ 752 (941)
. ..++||||++| .+|.+++... .++.. .+.+++.++.+||+.| |+||||||+|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 6999988542 24433 3568899999999999 9999999999999999999999
Q ss_pred eeccccc
Q 002289 753 DFGLSRL 759 (941)
Q Consensus 753 DFGla~~ 759 (941)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998864
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.48 E-value=1.6e-15 Score=166.47 Aligned_cols=184 Identities=28% Similarity=0.503 Sum_probs=136.4
Q ss_pred CccccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccceEecccccccccCchhccCCCcccee
Q 002289 128 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207 (941)
Q Consensus 128 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 207 (941)
.++.-...||+.|++. ++|..+..+..|+.|.|+.|.+. .+|..+.++..|++|+|+.|+++ .+|..++.++ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3455566667777766 66666666666777777777766 66677777777777777777777 5666666663 7777
Q ss_pred eccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEE
Q 002289 208 LLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTI 287 (941)
Q Consensus 208 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L 287 (941)
-+++|+++ .+|+.++.+..|..||.+.|++. .+|.-++++.+|+.|.+..|++...++++..+ .|..|
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~--slpsql~~l~slr~l~vrRn~l~~lp~El~~L---------pLi~l 216 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ--SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSL---------PLIRL 216 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh--hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCC---------ceeee
Confidence 77777777 66777777777777788877776 47777777888888888888877666654322 36788
Q ss_pred EccCCcCCCCcchhhcCCcccceeecccccCccCCCcccccc
Q 002289 288 KLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQS 329 (941)
Q Consensus 288 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (941)
|+|+|++. .+|..|.+|+.|++|-|.+|.|+ ..|..++..
T Consensus 217 DfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~k 256 (722)
T KOG0532|consen 217 DFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEK 256 (722)
T ss_pred ecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhc
Confidence 99999998 89999999999999999999998 778777654
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.41 E-value=2.7e-14 Score=157.03 Aligned_cols=194 Identities=25% Similarity=0.414 Sum_probs=100.2
Q ss_pred CCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccceEe
Q 002289 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (941)
Q Consensus 105 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 184 (941)
|..-...||+.|++. .+|..+..+..|+.|.|++|.+. .+|..+.++..|++|||+.|+++ .+|..++.|+ |+.|.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 333445555555555 55555555555555555555555 55555555555555555555555 4455444443 55555
Q ss_pred cccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCc
Q 002289 185 MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ 264 (941)
Q Consensus 185 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 264 (941)
+++|+++ .+|..++.+..|..|+.+.|++. .+|..++++.+|+.|.+..|++. .+|..+..| .|..||+|+|++.
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~--~lp~El~~L-pLi~lDfScNkis 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE--DLPEELCSL-PLIRLDFSCNKIS 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh--hCCHHHhCC-ceeeeecccCcee
Confidence 5555555 45555555555555555555555 44555555555555555555554 244444422 4555555555555
Q ss_pred CCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcC---Ccccceeecccc
Q 002289 265 GPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSG---LPRLQRLFIANN 316 (941)
Q Consensus 265 ~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~---l~~L~~L~Ls~N 316 (941)
..+-++ ..+..|++|-|.+|.|. ..|..+.- ..=.++|+..-+
T Consensus 225 ~iPv~f--------r~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 225 YLPVDF--------RKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred ecchhh--------hhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 333322 22233455555555555 33443332 222345555544
No 459
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.38 E-value=2e-12 Score=148.39 Aligned_cols=140 Identities=22% Similarity=0.256 Sum_probs=100.3
Q ss_pred cceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh----------------------------------------hHhHH
Q 002289 614 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----------------------------------------EKEFL 653 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~ 653 (941)
.+.||.|++|.||+|++++|+.||||+.+...... +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999986532110 01244
Q ss_pred HHHHHHHhcC-----CCceeeeeec-cccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHH-HHHHhhcC
Q 002289 654 TEIQFLSRLH-----HRNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR-GILYLHTE 726 (941)
Q Consensus 654 ~E~~~l~~l~-----h~nIv~l~~~-~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~~ 726 (941)
+|.+.+.+++ ++++. +-.. ....+..+|||||++|++|.++...... .. .+..++.++++ .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~-vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVY-VPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEE-eCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhC
Confidence 5665555552 33332 2222 2234567999999999999987643211 12 23456666666 47889998
Q ss_pred CCCCeEeccCCCCcEEEcCCCcEEEeeeccccccC
Q 002289 727 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 727 ~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
+ ++|+|+||.||+++++++++++|||++..+.
T Consensus 277 g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 G---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred C---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 9999999999999999999999999987653
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=3.1e-12 Score=132.34 Aligned_cols=154 Identities=25% Similarity=0.397 Sum_probs=114.2
Q ss_pred HHHhcCCCceeeeeeccccCC-----cEEEEEecCCCCCHHHHHhh--cCCCCccHHHHHHHHHHHHHHHHHhhcCCCCC
Q 002289 658 FLSRLHHRNLVSLVGYCDEEG-----EQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPP 730 (941)
Q Consensus 658 ~l~~l~h~nIv~l~~~~~~~~-----~~~LV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 730 (941)
-+-++.|.|||+++.|+.+.+ +..+++|||..|++..+|++ +....+....-.+++-||..||.|||+. .|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 344567999999999985543 57899999999999999975 2334567777788999999999999987 588
Q ss_pred eEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHH
Q 002289 731 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEL 810 (941)
Q Consensus 731 ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~el 810 (941)
|+|+++..+-|++..++-+|++----.. . .+..... .........+-++|.|||+-.....+.++|||+||....||
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s-~-h~s~~~~-~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDS-T-HPSVNST-REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccc-c-chhhhhh-hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 9999999999999999988875311110 0 0000000 01111223456899999988777778899999999999999
Q ss_pred HhCCC
Q 002289 811 LTGMQ 815 (941)
Q Consensus 811 ltG~~ 815 (941)
.-+..
T Consensus 276 ailEi 280 (458)
T KOG1266|consen 276 AILEI 280 (458)
T ss_pred HHhee
Confidence 87643
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=2.4e-12 Score=147.57 Aligned_cols=200 Identities=31% Similarity=0.480 Sum_probs=109.9
Q ss_pred EEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcC-ccceeecccccccccCCcccccccccceEecccc
Q 002289 110 ILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLP-KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (941)
Q Consensus 110 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (941)
.|+++.|.+... ...+..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 455555555321 223344455666666666665 4455455443 5666666666655 44455555666666666666
Q ss_pred cccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCC
Q 002289 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (941)
Q Consensus 189 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 268 (941)
+++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|.+++|++. ..+..+.+++++..|.+.+|++...+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~--~~~~~~~~~~~l~~l~l~~n~~~~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII--ELLSSLSNLKNLSGLELSNNKLEDLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce--ecchhhhhcccccccccCCceeeeccc
Confidence 665 44444445556666666666665 44444444445666666666432 345555666666666666666553221
Q ss_pred CCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCccCCCccc
Q 002289 269 DLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 326 (941)
Q Consensus 269 ~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 326 (941)
.+..+ .+++.|++++|+++...+ ++.+.+|+.|++++|.+....|...
T Consensus 250 ~~~~l--------~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 250 SIGNL--------SNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hhccc--------cccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 11111 224666777777663333 6777777777777777775555443
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=2e-12 Score=148.36 Aligned_cols=200 Identities=36% Similarity=0.498 Sum_probs=107.1
Q ss_pred EEecCCCCCccCCccccCCCCCCEEEcccCCCCCCCCCccCCcc-ccceecccCccccCCCCcccCCcCccceeeccccc
Q 002289 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIK-SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY 165 (941)
Q Consensus 87 L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 165 (941)
+++..+.+...+ ..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|+
T Consensus 98 l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 98 LDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 444444443221 23344455666666666666 4444445553 6666666666666 444555666666666666666
Q ss_pred ccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcch
Q 002289 166 ISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPA 245 (941)
Q Consensus 166 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~ 245 (941)
++ .+|.....+++|+.|++++|++. .+|........|++|.+++|++. ..+..+.+++++..|.+++|++.. ++.
T Consensus 175 l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~--~~~ 249 (394)
T COG4886 175 LS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED--LPE 249 (394)
T ss_pred hh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee--ccc
Confidence 65 44444445566666666666666 44444444445666666666433 344455566666666666666542 345
Q ss_pred hccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhc
Q 002289 246 SYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFS 303 (941)
Q Consensus 246 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~ 303 (941)
.++.+++|+.|++++|.++.... +. ...+++.|++++|.+....|....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~-~~--------~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS-LG--------SLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred hhccccccceecccccccccccc-cc--------ccCccCEEeccCccccccchhhhc
Confidence 55566666666666666653222 11 112346666666666655444433
No 463
>PLN03150 hypothetical protein; Provisional
Probab=99.27 E-value=2.1e-11 Score=146.38 Aligned_cols=93 Identities=32% Similarity=0.535 Sum_probs=81.0
Q ss_pred CCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCC-CCCCCcccccccCCcCEEEccCCcCCCCcchhhcCC
Q 002289 227 KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGL 305 (941)
Q Consensus 227 ~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l 305 (941)
.++.|+|++|.+.| .+|..+..+++|+.|+|++|+|+|.+|. +..+ .+|+.|+|++|+|+|.+|..++++
T Consensus 419 ~v~~L~L~~n~L~g-~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l--------~~L~~LdLs~N~lsg~iP~~l~~L 489 (623)
T PLN03150 419 FIDGLGLDNQGLRG-FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSI--------TSLEVLDLSYNSFNGSIPESLGQL 489 (623)
T ss_pred EEEEEECCCCCccc-cCCHHHhCCCCCCEEECCCCcccCcCChHHhCC--------CCCCEEECCCCCCCCCCchHHhcC
Confidence 47889999999998 7889999999999999999999987774 3333 456899999999999999999999
Q ss_pred cccceeecccccCccCCCccccc
Q 002289 306 PRLQRLFIANNSLSGSIPSSIWQ 328 (941)
Q Consensus 306 ~~L~~L~Ls~N~l~~~~p~~~~~ 328 (941)
++|+.|+|++|+++|.+|..+..
T Consensus 490 ~~L~~L~Ls~N~l~g~iP~~l~~ 512 (623)
T PLN03150 490 TSLRILNLNGNSLSGRVPAALGG 512 (623)
T ss_pred CCCCEEECcCCcccccCChHHhh
Confidence 99999999999999999998754
No 464
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.24 E-value=1.9e-11 Score=141.65 Aligned_cols=143 Identities=21% Similarity=0.207 Sum_probs=94.4
Q ss_pred cCCCccceeeccCcEEEEEEEeCC-CcEEEEEEeccCCch----------------------------------hhH---
Q 002289 609 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ----------------------------------GEK--- 650 (941)
Q Consensus 609 ~~y~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~--- 650 (941)
..|+. +.||+|++|.||+|+.++ |+.||||+.+..... ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34666 789999999999999887 999999998753110 011
Q ss_pred ---hHHHHHHHHHhcC----CCceeeeeeccc-cCCcEEEEEecCCCCCHHHH--HhhcCC--CCccHHHHHHHHHHHHH
Q 002289 651 ---EFLTEIQFLSRLH----HRNLVSLVGYCD-EEGEQMLVYEFMSNGTLRDQ--LSAKSK--EPLGFAMRLSIALGSSR 718 (941)
Q Consensus 651 ---~~~~E~~~l~~l~----h~nIv~l~~~~~-~~~~~~LV~e~~~~gsL~~~--l~~~~~--~~l~~~~~~~i~~~ia~ 718 (941)
++.+|...+.+++ +.+.+.+-..+. -....+|||||++|+.+.++ +...+. ..+.......++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 2344444444432 333333323332 24567899999999999875 322221 123333333444443
Q ss_pred HHHHhhcCCCCCeEeccCCCCcEEEcCCC----cEEEeeeccccccCC
Q 002289 719 GILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGLSRLAPV 762 (941)
Q Consensus 719 gL~yLH~~~~~~ivH~DLkp~NILl~~~~----~~kl~DFGla~~~~~ 762 (941)
+..| ++|+|+||.||+++.++ ++++.|||++..+..
T Consensus 277 -----f~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 -----FRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -----HhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3467 99999999999999888 999999999987643
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21 E-value=2e-11 Score=137.77 Aligned_cols=251 Identities=22% Similarity=0.219 Sum_probs=179.6
Q ss_pred cCCCccceeec--cCcEEEEEEEe---CCCcEEEEEEeccCCc--hhhHhHHHHHHHHHhc-CCCceeeeeeccccCCcE
Q 002289 609 NNFNSSTQIGQ--GGYGKVYKGIL---PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 680 (941)
Q Consensus 609 ~~y~~~~~lG~--G~fg~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 680 (941)
..|.+...+|. |.+|.||.+.. .++..+|+|.-+.... .....=.+|+.....+ .|+|.++.+..+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 34566788999 99999999986 3688999997443222 2223445677766666 499999988889999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHH----HHHHhhcCCCCCeEeccCCCCcEEEcCC-CcEEEeeec
Q 002289 681 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR----GILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFG 755 (941)
Q Consensus 681 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivH~DLkp~NILl~~~-~~~kl~DFG 755 (941)
++-+|++ +.+|.++.+.... .++....+.+..+..+ |+.++|+.. ++|-|+||.||+...+ ...+++|||
T Consensus 194 fiqtE~~-~~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 194 FIQTELC-GESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeeccc-cchhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 9999999 6788888765432 3667777888888888 999999999 9999999999999999 899999999
Q ss_pred cccccCCCCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhcc
Q 002289 756 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835 (941)
Q Consensus 756 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~ 835 (941)
+............ ........|...|++||...+ -++..+|+|++|.+..|..++..+...+.+.. |. +...
T Consensus 269 ~v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-W~----~~r~ 340 (524)
T KOG0601|consen 269 LVSKISDGNFSSV--FKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS-WS----QLRQ 340 (524)
T ss_pred eeEEccCCccccc--eeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC-cc----cccc
Confidence 9987765543221 111223357788999998755 45789999999999999999877765442210 00 0000
Q ss_pred chhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 002289 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 877 (941)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~ 877 (941)
.+ +. ..+-+.-..++......+++.++..|++.+.+.
T Consensus 341 ~~--ip---~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 341 GY--IP---LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred cc--Cc---hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 00 00 001111223455577788888888888777665
No 466
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.20 E-value=4.8e-11 Score=119.52 Aligned_cols=130 Identities=16% Similarity=0.108 Sum_probs=96.8
Q ss_pred cceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCcee-eeeeccccCCcEEEEEecCCCCCH
Q 002289 614 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV-SLVGYCDEEGEQMLVYEFMSNGTL 692 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~LV~e~~~~gsL 692 (941)
.+.|+.|.++.||++... +..|++|+...... ....+.+|+++++.+.+.+++ +++.+.. +..++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 457899999999999874 77899998765322 223567899999988655544 4554433 345899999999887
Q ss_pred HHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCC--CCCeEeccCCCCcEEEcCCCcEEEeeecccc
Q 002289 693 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA--DPPVFHRDIKASNILLDHKFTAKVADFGLSR 758 (941)
Q Consensus 693 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~DLkp~NILl~~~~~~kl~DFGla~ 758 (941)
.+.. . ....++.+++++|+.||+.+ ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 6430 1 11235678999999999887 22359999999999999 6789999999875
No 467
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.17 E-value=3e-10 Score=129.14 Aligned_cols=166 Identities=19% Similarity=0.196 Sum_probs=126.4
Q ss_pred eCCCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHH
Q 002289 630 LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR 709 (941)
Q Consensus 630 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~ 709 (941)
..++.+|.|...+...........+-++.|+.++||||+++++.+..++..|||+|-+. .|..++.+.+ ....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-----~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-----KEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-----HHHH
Confidence 34678888888776544334557788899999999999999999999999999999983 6777776543 5566
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCccccccccccccCCCccccccc
Q 002289 710 LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 789 (941)
Q Consensus 710 ~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 789 (941)
...+.||++||.|||..++ ++|++|.-+-|+|+..|+.||++|.++........ ......--..|..|+.+
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------PAKSLYLIESFDDPEEI 177 (690)
T ss_pred HHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------ccccchhhhcccChhhc
Confidence 7788999999999997664 99999999999999999999999998864432110 00111111246667655
Q ss_pred ccCCCCchhHhHHHHHHHHHHHhC
Q 002289 790 LTHKLTDKSDVYSLGVVFLELLTG 813 (941)
Q Consensus 790 ~~~~~~~~sDVwSlG~ll~elltG 813 (941)
.... -..|.|.|||+++|++.|
T Consensus 178 ~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 178 DPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred Cccc--cchhhhhHHHHHHHHhCc
Confidence 4333 246999999999999998
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.13 E-value=1.3e-11 Score=125.81 Aligned_cols=221 Identities=20% Similarity=0.267 Sum_probs=108.1
Q ss_pred ceeeEEEecCC-------C-CCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCc
Q 002289 82 LHLRELQLLNL-------N-LSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYL 153 (941)
Q Consensus 82 ~~l~~L~L~~~-------~-l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 153 (941)
.++..|..+.. | +...+|-.+.-+++|+.+.+|.+.-.. +-+--..-+.|+++...+.-++. .|. +-..
T Consensus 182 ~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~~-~~~-l~pe 258 (490)
T KOG1259|consen 182 TQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQD-VPS-LLPE 258 (490)
T ss_pred hheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhh-eeceeecCchhheeeeecccccc-ccc-ccch
Confidence 45677766542 1 222344455567777777777765431 11112223556777666555441 111 1111
Q ss_pred Cccceeecccc-cccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEe
Q 002289 154 PKLDRIQIDQN-YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQ 232 (941)
Q Consensus 154 ~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 232 (941)
..+..+.-+.- -.+|..-..+...+.|++|+|++|.|+ .+..+..-+|.++.|++|+|.|. .+. .+..+++|+.||
T Consensus 259 ~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LD 335 (490)
T KOG1259|consen 259 TILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLD 335 (490)
T ss_pred hhhcCccCCCCCccCCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEee
Confidence 12221111111 112222333444456666666666666 45555555666666666666665 222 255566666666
Q ss_pred ccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCc-chhhcCCccccee
Q 002289 233 LDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTI-PSNFSGLPRLQRL 311 (941)
Q Consensus 233 Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L 311 (941)
||+|.++. +..+-..+-+++.|.|++|.|+ .+..+..+ -+|..||+++|+|.... -..+++||-|+.|
T Consensus 336 LS~N~Ls~--~~Gwh~KLGNIKtL~La~N~iE-------~LSGL~KL--YSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l 404 (490)
T KOG1259|consen 336 LSGNLLAE--CVGWHLKLGNIKTLKLAQNKIE-------TLSGLRKL--YSLVNLDLSSNQIEELDEVNHIGNLPCLETL 404 (490)
T ss_pred cccchhHh--hhhhHhhhcCEeeeehhhhhHh-------hhhhhHhh--hhheeccccccchhhHHHhcccccccHHHHH
Confidence 66666653 3344445555566666666554 11122111 13455555555554221 2334556666666
Q ss_pred ecccccCc
Q 002289 312 FIANNSLS 319 (941)
Q Consensus 312 ~Ls~N~l~ 319 (941)
.|.+|.|.
T Consensus 405 ~L~~NPl~ 412 (490)
T KOG1259|consen 405 RLTGNPLA 412 (490)
T ss_pred hhcCCCcc
Confidence 66666655
No 469
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.13 E-value=4.8e-10 Score=113.16 Aligned_cols=137 Identities=17% Similarity=0.085 Sum_probs=98.5
Q ss_pred cceeeccCcEEEEEEEeCC-------CcEEEEEEeccCCc----------------------hhhHh----HHHHHHHHH
Q 002289 614 STQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGSL----------------------QGEKE----FLTEIQFLS 660 (941)
Q Consensus 614 ~~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~----~~~E~~~l~ 660 (941)
...||.|--+.||.|...+ +..+|||+.+.... ...+. ..+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998653 47999997652110 00112 248999999
Q ss_pred hcCC--CceeeeeeccccCCcEEEEEecCCCCCHHH-HHhhcCCCCccHHHHHHHHHHHHHHHHHh-hcCCCCCeEeccC
Q 002289 661 RLHH--RNLVSLVGYCDEEGEQMLVYEFMSNGTLRD-QLSAKSKEPLGFAMRLSIALGSSRGILYL-HTEADPPVFHRDI 736 (941)
Q Consensus 661 ~l~h--~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~DL 736 (941)
++.. -++.+++++ ...++||||+.+..+.. .+.. ..++......+..+++.+|.++ |+.+ +|||||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDL 151 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADL 151 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 9853 456666654 56789999996643422 2221 1244455667889999999999 7888 999999
Q ss_pred CCCcEEEcCCCcEEEeeeccccccC
Q 002289 737 KASNILLDHKFTAKVADFGLSRLAP 761 (941)
Q Consensus 737 kp~NILl~~~~~~kl~DFGla~~~~ 761 (941)
++.||+++ ++.++|+|||.|....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999887543
No 470
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.12 E-value=1.8e-11 Score=144.26 Aligned_cols=270 Identities=19% Similarity=0.229 Sum_probs=181.2
Q ss_pred HhcCCCccceeeccCcEEEEEEEeC-CCcEEEEEEeccCCchh---hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEE
Q 002289 607 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 682 (941)
Q Consensus 607 ~~~~y~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 682 (941)
..+.+.+.+-+-+|.++.++.+.-. .|...+.|+......-. -+....+-.++-..+||-+++..-.+......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4566777778889999999877632 34444444433211111 1122223233333456777766555666678899
Q ss_pred EEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 683 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 683 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
|++|..+++|...++..+ ..+....+.....+.++++|||... +.|+|++|.|.+...++..+++|||.......
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999997654 3444455556667788999999987 89999999999999999999999984432211
Q ss_pred C----CC-----------------C---CccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCCCCC
Q 002289 763 P----DI-----------------E---GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 818 (941)
Q Consensus 763 ~----~~-----------------~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~ 818 (941)
. +. . ............||+.|.+||...+......+|+|++|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 00 0 0001122345679999999999999999999999999999999999999996
Q ss_pred CCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccc
Q 002289 819 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFI 898 (941)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~dll 898 (941)
...... ....+...... +-....+..+.+.+++
T Consensus 1037 a~tpq~----------~f~ni~~~~~~-------------------------------------~p~g~~~~s~~aq~~~ 1069 (1205)
T KOG0606|consen 1037 AETPQQ----------IFENILNRDIP-------------------------------------WPEGPEEGSYEAQDLI 1069 (1205)
T ss_pred Ccchhh----------hhhccccCCCC-------------------------------------CCCCccccChhhhhhh
Confidence 543210 00011111000 0011123345566788
Q ss_pred cccCCCCCCCCCCCc---cCCCCCCCCCCCCCC
Q 002289 899 NSEHTSKEETPPSSS---SMLKHPYVSSDVSGS 928 (941)
Q Consensus 899 ~~~L~~dP~~R~sa~---e~L~Hpwf~~~~~~~ 928 (941)
...|+.+|.+|..|. +.-.||+|+...++.
T Consensus 1070 ~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1070 NRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred hhhhccCchhccCcccccccccCCccCCCCccc
Confidence 889999999999888 888999998877653
No 471
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.11 E-value=1.3e-11 Score=125.85 Aligned_cols=128 Identities=24% Similarity=0.323 Sum_probs=71.8
Q ss_pred CCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccc
Q 002289 201 LPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLL 280 (941)
Q Consensus 201 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~ 280 (941)
+..|++||||+|.|+ .+.+++.-++.++.|++|+|.|.. + ..+..+++|+.||||+|.++
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~--v-~nLa~L~~L~~LDLS~N~Ls---------------- 342 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT--V-QNLAELPQLQLLDLSGNLLA---------------- 342 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceee--e-hhhhhcccceEeecccchhH----------------
Confidence 445566666666665 445555555666666666666542 1 23555555555555555544
Q ss_pred cCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCCCCCCC--CC-CCC
Q 002289 281 SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG--SF-NIP 357 (941)
Q Consensus 281 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~--~~-~~~ 357 (941)
.+..+-..|-+++.|.|++|.|. ++..+.+|. +|..||+++|+|..++. .+ .+|
T Consensus 343 ----------------~~~Gwh~KLGNIKtL~La~N~iE-----~LSGL~KLY--SLvnLDl~~N~Ie~ldeV~~IG~LP 399 (490)
T KOG1259|consen 343 ----------------ECVGWHLKLGNIKTLKLAQNKIE-----TLSGLRKLY--SLVNLDLSSNQIEELDEVNHIGNLP 399 (490)
T ss_pred ----------------hhhhhHhhhcCEeeeehhhhhHh-----hhhhhHhhh--hheeccccccchhhHHHhccccccc
Confidence 23333334445555555555554 233333332 45567777777766642 22 678
Q ss_pred CCcEEEecCCCCcc
Q 002289 358 PNVTVRLRGNPFCL 371 (941)
Q Consensus 358 ~~~~l~l~~Np~~c 371 (941)
-+.++.|.+||+.-
T Consensus 400 CLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 400 CLETLRLTGNPLAG 413 (490)
T ss_pred HHHHHhhcCCCccc
Confidence 88999999999743
No 472
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.11 E-value=2.8e-12 Score=134.21 Aligned_cols=232 Identities=19% Similarity=0.267 Sum_probs=157.2
Q ss_pred eeeEEEecCCCCCcc----CCccccCCCCCCEEEcccC---CCCCCCCCc-------cCCccccceecccCccccCCCCc
Q 002289 83 HLRELQLLNLNLSGN----LSPEIGRLSYLTILDFMWN---KISGSIPKE-------IGNIKSLELLLLNGNELTGSLPE 148 (941)
Q Consensus 83 ~l~~L~L~~~~l~~~----~~~~l~~l~~L~~L~Ls~N---~l~~~~p~~-------~~~l~~L~~L~Ls~N~l~~~~p~ 148 (941)
.++.|+|++|.+... +.+.+.+.++|+..++|+= ++...+|.. +...++|++||||+|.|.-.-+.
T Consensus 31 s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~ 110 (382)
T KOG1909|consen 31 SLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIR 110 (382)
T ss_pred ceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchH
Confidence 579999999988643 5566788899999999863 223344443 34557999999999999855444
Q ss_pred c----cCCcCccceeecccccccccCCc-------------ccccccccceEecccccccccC----chhccCCCcccee
Q 002289 149 E----LGYLPKLDRIQIDQNYISGSLPK-------------SFANLNKTRHFHMNNNSISGQI----PPELSRLPSLVHM 207 (941)
Q Consensus 149 ~----~~~l~~L~~L~Ls~N~l~~~~p~-------------~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L 207 (941)
. +.++..|++|+|.+|.+...--. -...-++|+.+...+|++.... ...|...+.|+.+
T Consensus 111 ~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leev 190 (382)
T KOG1909|consen 111 GLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEV 190 (382)
T ss_pred HHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceE
Confidence 3 45678899999999998622111 1234478899999999887432 2345667889999
Q ss_pred eccCCcCCCC----CCccCCCCCCCCEEeccCCcCCC---CCcchhccCCCCCcEEEccCCCCcCCCCC--CCCCCcccc
Q 002289 208 LLDNNNLTGY----LPPELSELPKLLILQLDNNNFEG---TTIPASYSNMSKLLKLSLRNCSLQGPMPD--LSRIPNLGY 278 (941)
Q Consensus 208 ~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~l~~l~~ 278 (941)
.++.|.|... +...|..+++|+.|||..|-|+. ..+...+..++.|++|++++|.++..-.. +..+..
T Consensus 191 r~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~--- 267 (382)
T KOG1909|consen 191 RLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKE--- 267 (382)
T ss_pred EEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhc---
Confidence 9999988632 22457788999999999998863 23455677888888888888888632111 101110
Q ss_pred cccCCcCEEEccCCcCCC----CcchhhcCCcccceeecccccC
Q 002289 279 LLSLNITTIKLSNNKLTG----TIPSNFSGLPRLQRLFIANNSL 318 (941)
Q Consensus 279 l~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l 318 (941)
..++|++|+|.+|.|+. .+-.+....+.|..|+|++|.+
T Consensus 268 -~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 268 -SAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred -cCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 13456777777777763 2333444566677777777766
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=4.6e-11 Score=118.19 Aligned_cols=125 Identities=29% Similarity=0.418 Sum_probs=30.5
Q ss_pred ccccceecccCccccCCCCcccC-CcCccceeecccccccccCCcccccccccceEecccccccccCchhc-cCCCccce
Q 002289 129 IKSLELLLLNGNELTGSLPEELG-YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPEL-SRLPSLVH 206 (941)
Q Consensus 129 l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~ 206 (941)
..++++|+|++|+|+ .+. .++ .+.+|+.|+|++|.|+.. +.+..+++|++|++++|+|+. +...+ ..+++|++
T Consensus 18 ~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--E
T ss_pred ccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCCE
Confidence 334455555555554 222 222 344455555555554422 124444555555555555552 22222 23455555
Q ss_pred eeccCCcCCCCCC-ccCCCCCCCCEEeccCCcCCCCC--cchhccCCCCCcEEEc
Q 002289 207 MLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTT--IPASYSNMSKLLKLSL 258 (941)
Q Consensus 207 L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~--~p~~~~~l~~L~~L~L 258 (941)
|+|++|+|...-. ..+..+++|+.|+|.+|.+.... -...+..+++|+.||-
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 5555555542211 23444555666666666554310 0113445555655544
No 474
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.09 E-value=2.8e-12 Score=134.25 Aligned_cols=256 Identities=18% Similarity=0.252 Sum_probs=154.1
Q ss_pred ccccCCCCCCEEEcccCCCCC----CCCCccCCccccceecccCcccc---CCCCcc-------cCCcCccceeeccccc
Q 002289 100 PEIGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELT---GSLPEE-------LGYLPKLDRIQIDQNY 165 (941)
Q Consensus 100 ~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~-------~~~l~~L~~L~Ls~N~ 165 (941)
+.+..+..++.|+||+|.|.. .+-..+.+.++|+.-++++-.-. ..+|.. +...++|++||||+|-
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 345567778888888888763 23344556677777777653221 123322 2334455555555555
Q ss_pred ccccCCcc----cccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCC
Q 002289 166 ISGSLPKS----FANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (941)
Q Consensus 166 l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 241 (941)
|....+.. +.++..|++|+|.+|.+.-.--..++ ..|..|. .|+ -...-++|+++..++|++...
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNK-------KAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHh-------ccCCCcceEEEEeeccccccc
Confidence 54332222 23344444444444444311000111 0111111 111 122346788888888888632
Q ss_pred ---CcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCC----cchhhcCCcccceeecc
Q 002289 242 ---TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIA 314 (941)
Q Consensus 242 ---~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls 314 (941)
.+...|...+.|+.+.++.|.|.. +.+ .+-...+-++++|+.|||.+|-++.. +..++..+++|+.|+++
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~--eG~-~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~ 249 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRP--EGV-TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLG 249 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccC--chh-HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccc
Confidence 123457777888888888888752 211 12223445567789999999988743 46677789999999999
Q ss_pred cccCccCCCcccccccccCccccceEEccCCCCCCC-----CCCC-CCCCCcEEEecCCCC
Q 002289 315 NNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI-----SGSF-NIPPNVTVRLRGNPF 369 (941)
Q Consensus 315 ~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~-----~~~~-~~~~~~~l~l~~Np~ 369 (941)
+|.++..--..+..--.-..+.|++|+|.+|.|+.= ...+ ..|.+..|.|+||.+
T Consensus 250 dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 250 DCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 999987766666554333467899999999999762 1111 477889999999998
No 475
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.08 E-value=1e-10 Score=132.15 Aligned_cols=246 Identities=20% Similarity=0.227 Sum_probs=173.7
Q ss_pred HHHHhcCCCccceeeccCcEEEEEEEeC--CCcEEEEEEeccCCchhh--HhHHHHHHHHHhc-CCCceeeeeeccccCC
Q 002289 604 MALATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 678 (941)
Q Consensus 604 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 678 (941)
......+|..+..||.|.|+.|++...+ ++..+++|.......... ..-..|+.+...+ .|.+++.....+...+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3445678888999999999999988743 678999998776443322 2234566666665 5888888777777777
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-CcEEEeeeccc
Q 002289 679 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLS 757 (941)
Q Consensus 679 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~-~~~kl~DFGla 757 (941)
..++=-||++++++...+ .-...+++..++.+..|++.++.++|+.. ++|+|+||+||++..+ +..+++|||.+
T Consensus 340 ~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccc
Confidence 778999999999987766 23345778889999999999999999988 9999999999999886 88999999998
Q ss_pred cccCCCCCCCccccccccccccCCCcc--cccccccCCCCchhHhHHHHHHHHHHHhCCCCCCCCchhHHHHHHHHhhcc
Q 002289 758 RLAPVPDIEGIVPAHVSTVVKGTPGYL--DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 835 (941)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDVwSlG~ll~elltG~~Pf~~~~~~~~~~~~~~~~~~ 835 (941)
..+... ........++. +++......+..+.|++|||..+.|.++|..--.... .
T Consensus 415 t~~~~~----------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-------------~ 471 (524)
T KOG0601|consen 415 TRLAFS----------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-------------Q 471 (524)
T ss_pred ccccee----------cccccccccccccchhhccccccccccccccccccccccccCcccCcccc-------------c
Confidence 643211 11112223444 5555666788899999999999999999854322211 1
Q ss_pred chhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002289 836 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 878 (941)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 878 (941)
...+..+.....+... ..++.+.+.+...++..||.+.+...
T Consensus 472 ~~~i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 472 SLTIRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred ceeeecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhcc
Confidence 1222333333333333 56666666677777777777665543
No 476
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.08 E-value=1e-11 Score=142.70 Aligned_cols=242 Identities=26% Similarity=0.302 Sum_probs=140.4
Q ss_pred cCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccce
Q 002289 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (941)
Q Consensus 103 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (941)
..+..++.+++..|.|.. +-..+..+++|..|+|.+|+|. .+...+..+++|++|+|++|.|+.+. .+..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhh
Confidence 345666666677777762 3334666777777777777777 44444666777777777777777542 3445555777
Q ss_pred EecccccccccCchhccCCCccceeeccCCcCCCCCC-ccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCC
Q 002289 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (941)
Q Consensus 183 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (941)
|++++|.|+. + ..+..+++|+.+++++|++....+ . ...+.+|+.+++++|.+.. ...+..+..+..+++..|
T Consensus 145 L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~---i~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 145 LNLSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE---IEGLDLLKKLVLLSLLDN 218 (414)
T ss_pred heeccCcchh-c-cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc---ccchHHHHHHHHhhcccc
Confidence 7777777762 2 234456777777777777774433 1 4666777777777777653 234444555555577777
Q ss_pred CCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEE
Q 002289 262 SLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 341 (941)
Q Consensus 262 ~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~ 341 (941)
.++- +..+.......|+.+++++|++. .++..+..+..+..|++.+|++...-... ....+..+.
T Consensus 219 ~i~~-------~~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~~~-------~~~~~~~~~ 283 (414)
T KOG0531|consen 219 KISK-------LEGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEGLE-------RLPKLSELW 283 (414)
T ss_pred ccee-------ccCcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccccc-------ccchHHHhc
Confidence 6652 11111111112567777777776 33355666777777777777776221111 122344555
Q ss_pred ccCCCCCCCC----C--CCCCCCCcEEEecCCCC
Q 002289 342 FQNNNLTNIS----G--SFNIPPNVTVRLRGNPF 369 (941)
Q Consensus 342 Ls~N~l~~~~----~--~~~~~~~~~l~l~~Np~ 369 (941)
++.|.+.... . ....+.+..+.+.+||.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
T KOG0531|consen 284 LNDNKLALSEAISQEYITSAAPTLVTLTLELNPI 317 (414)
T ss_pred cCcchhcchhhhhccccccccccccccccccCcc
Confidence 6666655321 1 22344455566666654
No 477
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=1.7e-11 Score=131.65 Aligned_cols=215 Identities=19% Similarity=0.197 Sum_probs=143.3
Q ss_pred ccCCCCCCEEEcccCCCCCCCC--CccCCccccceecccCccccCCCC--cccCCcCccceeecccccccccCCcc-ccc
Q 002289 102 IGRLSYLTILDFMWNKISGSIP--KEIGNIKSLELLLLNGNELTGSLP--EELGYLPKLDRIQIDQNYISGSLPKS-FAN 176 (941)
Q Consensus 102 l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~ 176 (941)
=.++.+|++..|.+..+. ..+ .....+++++.||||+|-|....+ .....||+|+.|+|+.|++....... -..
T Consensus 117 Qsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 346778888888887776 333 355678888888888888874322 33567888888888888877443322 224
Q ss_pred ccccceEecccccccccC-chhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcE
Q 002289 177 LNKTRHFHMNNNSISGQI-PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLK 255 (941)
Q Consensus 177 l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~ 255 (941)
++.|+.|.|+.+.|+..- -..+..+|+|+.|+|..|...+.-......+..|+.|||++|++-....-...+.++.|+.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhh
Confidence 678888888888887321 2234567888888888885333444455567788888888888864333356778888888
Q ss_pred EEccCCCCcCC-CCCCCCCCcccccccCCcCEEEccCCcCCCC-cchhhcCCcccceeecccccCc
Q 002289 256 LSLRNCSLQGP-MPDLSRIPNLGYLLSLNITTIKLSNNKLTGT-IPSNFSGLPRLQRLFIANNSLS 319 (941)
Q Consensus 256 L~Ls~N~l~~~-~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 319 (941)
|.++.+.+... .|+...+... -....|+.|+++.|+|... --..+..+++|+.|.+..|.|.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt--~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKT--HTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhccccCcchhcCCCccchhhh--cccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 88888887653 2322111111 1124578889999988521 1233556778888888899886
No 478
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=2.2e-11 Score=130.85 Aligned_cols=210 Identities=21% Similarity=0.253 Sum_probs=142.5
Q ss_pred CCccccceecccCccccCCCC--cccCCcCccceeecccccccccCC--cccccccccceEecccccccccCchhc-cCC
Q 002289 127 GNIKSLELLLLNGNELTGSLP--EELGYLPKLDRIQIDQNYISGSLP--KSFANLNKTRHFHMNNNSISGQIPPEL-SRL 201 (941)
Q Consensus 127 ~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l 201 (941)
.++.+|+...|.+..+. ..+ .....|++++.||||.|-+....+ .....|++|+.|+|+.|++.....+.. ..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 46788999999888877 333 356778999999999998874433 345678999999999999874443322 246
Q ss_pred CccceeeccCCcCCCC-CCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCC--CCCCCCCcccc
Q 002289 202 PSLVHMLLDNNNLTGY-LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM--PDLSRIPNLGY 278 (941)
Q Consensus 202 ~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~l~~ 278 (941)
+.|+.|.|+.|.|+.. +...+..+++|+.|+|..|.... .......-+..|++|||++|++-... +....
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~-~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~------ 269 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIIL-IKATSTKILQTLQELDLSNNNLIDFDQGYKVGT------ 269 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccc-eecchhhhhhHHhhccccCCccccccccccccc------
Confidence 7889999999998832 22334567899999999995332 33345566778999999999886322 11222
Q ss_pred cccCCcCEEEccCCcCCCCc-chh-----hcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCCCCC
Q 002289 279 LLSLNITTIKLSNNKLTGTI-PSN-----FSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 350 (941)
Q Consensus 279 l~~~~L~~L~Ls~N~l~~~~-p~~-----~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~ 350 (941)
+++|..|+++.+.|..+- |+. ...+++|++|+++.|++.. . .++.++.. ..+|+.|....|.|+.-
T Consensus 270 --l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~-w-~sl~~l~~--l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 270 --LPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRD-W-RSLNHLRT--LENLKHLRITLNYLNKE 341 (505)
T ss_pred --ccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcccc-c-cccchhhc--cchhhhhhccccccccc
Confidence 245577788888887543 333 3467889999999998851 1 12222222 23667777788888764
No 479
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.07 E-value=1.7e-09 Score=104.20 Aligned_cols=143 Identities=22% Similarity=0.240 Sum_probs=104.3
Q ss_pred ccceeeccCcEEEEEEEeCCCcEEEEEEeccCCch--------hhHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEE
Q 002289 613 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 684 (941)
Q Consensus 613 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 684 (941)
....+-||+-+.|+++.+ .|+...||.-...... ..++..+|.+.+.+++--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 467899999999999998 5677777743221111 1356788999998886444443334555556667999
Q ss_pred ecCCC-CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC---cEEEeeeccccc
Q 002289 685 EFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRL 759 (941)
Q Consensus 685 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~---~~kl~DFGla~~ 759 (941)
||++| .++.+++...............++..|-+.+.-||..+ |||+||..+||++.+++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99965 47888876554433333444678888899999999999 99999999999997655 468999999864
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.04 E-value=1.4e-09 Score=114.04 Aligned_cols=142 Identities=23% Similarity=0.349 Sum_probs=110.1
Q ss_pred ceeeccCcEEEEEEEeCCCcEEEEEEeccCCc-hhhHhHHHHHHHHHhcCCC--ceeeeeeccccC---CcEEEEEecCC
Q 002289 615 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHR--NLVSLVGYCDEE---GEQMLVYEFMS 688 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~---~~~~LV~e~~~ 688 (941)
+.|+.|.++.||++...+|+.+++|....... .....+.+|+++++.+++. ++.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999987778999998765332 1345788999999999763 456777777654 36689999999
Q ss_pred CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCC-----------------------------------------
Q 002289 689 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA----------------------------------------- 727 (941)
Q Consensus 689 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------- 727 (941)
|.++.+.+.. ..++...+..++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888775531 24667777788888888888888521
Q ss_pred ------------CCCeEeccCCCCcEEEcC--CCcEEEeeeccccc
Q 002289 728 ------------DPPVFHRDIKASNILLDH--KFTAKVADFGLSRL 759 (941)
Q Consensus 728 ------------~~~ivH~DLkp~NILl~~--~~~~kl~DFGla~~ 759 (941)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 234799999999999998 66789999998763
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=1e-10 Score=115.74 Aligned_cols=126 Identities=30% Similarity=0.399 Sum_probs=42.7
Q ss_pred ccCCCCCCEEEcccCCCCCCCCCccC-CccccceecccCccccCCCCcccCCcCccceeecccccccccCCccc-ccccc
Q 002289 102 IGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSF-ANLNK 179 (941)
Q Consensus 102 l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~ 179 (941)
+.+..++++|+|++|+|+. +. .++ .+.+|+.|||++|.|+ .++ .+..+++|+.|+|++|.|+.. .+.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSI-SEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCcc-ccchHHhCCc
Confidence 3444557777777777773 32 354 4677777777777777 333 466677777777777777743 3333 35777
Q ss_pred cceEecccccccccC-chhccCCCccceeeccCCcCCCCCCc----cCCCCCCCCEEec
Q 002289 180 TRHFHMNNNSISGQI-PPELSRLPSLVHMLLDNNNLTGYLPP----ELSELPKLLILQL 233 (941)
Q Consensus 180 L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L 233 (941)
|++|+|++|+|...- -..+..+++|+.|+|.+|.++.. +. .+..+|+|+.||-
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 777777777776322 13456677888888888887633 21 2455778887764
No 482
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.5e-09 Score=103.97 Aligned_cols=131 Identities=22% Similarity=0.304 Sum_probs=98.1
Q ss_pred ceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh--------hHhHHHHHHHHHhcCCCceeeeeeccccCCcEEEEEec
Q 002289 615 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--------EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 686 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 686 (941)
..+++|+-+.+|.+.+. |..+++|.-....... ..+-.+|.+++.+++--.|...+-+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999874 4446777533222111 23567899999988755555555566667778899999
Q ss_pred CCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 687 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 687 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
++|..|.+.+... ...++..+-.-+.-||..+ |+|+||.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888554 2345566666677899999 99999999999998765 99999999874
No 483
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.93 E-value=9.2e-11 Score=134.89 Aligned_cols=240 Identities=23% Similarity=0.297 Sum_probs=167.6
Q ss_pred CCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccceEec
Q 002289 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (941)
Q Consensus 106 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 185 (941)
+.++.++...+.+.+.--. ...+..++.+++..|.+. .+-..+..+.+|+.|+|.+|+|.++ ...+..+++|++|+|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhc-ccchhhhhcchheec
Confidence 3455556655554421111 156788889999999998 4556688899999999999999944 333788999999999
Q ss_pred ccccccccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCCEEeccCCcCCCCCcchh-ccCCCCCcEEEccCCCCc
Q 002289 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPAS-YSNMSKLLKLSLRNCSLQ 264 (941)
Q Consensus 186 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~-~~~l~~L~~L~Ls~N~l~ 264 (941)
++|+|+...+ +..++.|+.|++++|.|+.. ..+..+++|+.+++++|++.. +... ...+.+|+.+++.+|.+.
T Consensus 126 s~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~--ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 126 SFNKITKLEG--LSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVD--IENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred cccccccccc--hhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhh--hhhhhhhhccchHHHhccCCchh
Confidence 9999995543 56777899999999999843 356668999999999999985 2222 578899999999999887
Q ss_pred CCCCCCCCCCcccccccCCcCEEEccCCcCCCCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccC
Q 002289 265 GPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQN 344 (941)
Q Consensus 265 ~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~ 344 (941)
.. ..+... ..+..+++..|.++..-+........|+.+++++|++. .++..+. ....+..||+.+
T Consensus 200 ~i-------~~~~~~--~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~-----~~~~l~~l~~~~ 264 (414)
T KOG0531|consen 200 EI-------EGLDLL--KKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRIS-RSPEGLE-----NLKNLPVLDLSS 264 (414)
T ss_pred cc-------cchHHH--HHHHHhhcccccceeccCcccchhHHHHHHhcccCccc-ccccccc-----ccccccccchhh
Confidence 21 111111 23355588889887443322111113889999999988 4432222 234566899999
Q ss_pred CCCCCCCCCCCCCCCcEEEecCCCC
Q 002289 345 NNLTNISGSFNIPPNVTVRLRGNPF 369 (941)
Q Consensus 345 N~l~~~~~~~~~~~~~~l~l~~Np~ 369 (941)
|++..+...-..+....+.+..|+.
T Consensus 265 n~~~~~~~~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 265 NRISNLEGLERLPKLSELWLNDNKL 289 (414)
T ss_pred ccccccccccccchHHHhccCcchh
Confidence 9998876544555555566666654
No 484
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.91 E-value=7.9e-08 Score=106.23 Aligned_cols=167 Identities=19% Similarity=0.256 Sum_probs=127.7
Q ss_pred cEEEEEEEeC-CCcEEEEEEeccCCchhhHhHHHHHHHHHhcCCCceeeeeeccc----cCCcEEEEEecCCC-CCHHHH
Q 002289 622 YGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----EEGEQMLVYEFMSN-GTLRDQ 695 (941)
Q Consensus 622 fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~LV~e~~~~-gsL~~~ 695 (941)
-.+.||+... ||..|++|+++............-+++++++.|.|||+|.++|. .+...++||+|+|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3578999854 89999999996544443333455688999999999999999885 33478999999875 577775
Q ss_pred Hhhc-------------CCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 696 LSAK-------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 696 l~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
-... .....++...|.++.|+..||.++|+.| ..-+-|.+++|+++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 4321 1224678899999999999999999999 99999999999999999999988887665432
Q ss_pred CCCCCccccccccccccCCCcccccccccCCCCchhHhHHHHHHHHHHHhCCC
Q 002289 763 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQ 815 (941)
Q Consensus 763 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltG~~ 815 (941)
++. |-+.+ -.+-|.-.||.+++.|.||..
T Consensus 446 d~~---------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 DPT---------------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC---------------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 210 11111 235789999999999999954
No 485
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.84 E-value=8.6e-11 Score=132.74 Aligned_cols=181 Identities=24% Similarity=0.326 Sum_probs=112.0
Q ss_pred CcccCCcCccceeecccccccccCCcccccc-cccceEecccccccccCchh-------ccC---CCccceeeccCCcCC
Q 002289 147 PEELGYLPKLDRIQIDQNYISGSLPKSFANL-NKTRHFHMNNNSISGQIPPE-------LSR---LPSLVHMLLDNNNLT 215 (941)
Q Consensus 147 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~-------~~~---l~~L~~L~L~~N~l~ 215 (941)
|-.+..+.+|+.|.|.++.|.. -..+..+ ..|+.|.. +|.+. .+... +++ ...|...+.+.|.|.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~-Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLD-ALRHVFASCGGDISNSPVWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHH-HHHHHHHHhccccccchhhhhHhhhhcchhhHH
Confidence 5567777888999888888763 1112111 23444432 33322 11111 111 236788888999988
Q ss_pred CCCCccCCCCCCCCEEeccCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCC
Q 002289 216 GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLT 295 (941)
Q Consensus 216 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~ 295 (941)
.+..++.-++.|+.|+|++|+++.. +.+..+++|++|||++|.|+ .++.+..... .|+.|.|.+|.++
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v---~~Lr~l~~LkhLDlsyN~L~-------~vp~l~~~gc-~L~~L~lrnN~l~ 245 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKV---DNLRRLPKLKHLDLSYNCLR-------HVPQLSMVGC-KLQLLNLRNNALT 245 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhh---HHHHhcccccccccccchhc-------cccccchhhh-hheeeeecccHHH
Confidence 6677888888999999999998753 47788888888888888887 2222322222 2566777777665
Q ss_pred CCcchhhcCCcccceeecccccCccCCCcccccccccCccccceEEccCCCCCCCCCCC---CCCCCcEEEecCCCCccC
Q 002289 296 GTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCLN 372 (941)
Q Consensus 296 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~~L~~L~Ls~N~l~~~~~~~---~~~~~~~l~l~~Np~~c~ 372 (941)
... .+.+|.+|+.||+++|-|. ..+.-. .+..+..|+|.|||++|.
T Consensus 246 tL~--gie~LksL~~LDlsyNll~-----------------------------~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 246 TLR--GIENLKSLYGLDLSYNLLS-----------------------------EHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred hhh--hHHhhhhhhccchhHhhhh-----------------------------cchhhhHHHHHHHHHHHhhcCCccccC
Confidence 221 2345556666666666554 332111 234567789999999998
Q ss_pred CC
Q 002289 373 TN 374 (941)
Q Consensus 373 c~ 374 (941)
..
T Consensus 295 p~ 296 (1096)
T KOG1859|consen 295 PW 296 (1096)
T ss_pred HH
Confidence 74
No 486
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.80 E-value=6e-08 Score=103.68 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=100.2
Q ss_pred eeeccCcEEEEEEEeCCCcEEEEEEeccCCchh-h----------HhHHHHHHHHHhcCCCce--eeeeecccc-----C
Q 002289 616 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-E----------KEFLTEIQFLSRLHHRNL--VSLVGYCDE-----E 677 (941)
Q Consensus 616 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-~----------~~~~~E~~~l~~l~h~nI--v~l~~~~~~-----~ 677 (941)
.+-.-....|++..+ +|+.|.||......... . ..+.+|.+.+.++...+| .+.+++... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 343333345667666 67889999775433111 1 147889998888854333 344455432 2
Q ss_pred CcEEEEEecCCCC-CHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-------CCcE
Q 002289 678 GEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------KFTA 749 (941)
Q Consensus 678 ~~~~LV~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~-------~~~~ 749 (941)
..-+||||++++. +|.+++......+.+...+..++.+++..+.-||..| |+|+|++++|||++. ++.+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceE
Confidence 3578999999875 8999985432334566777889999999999999999 999999999999975 4689
Q ss_pred EEeeeccccc
Q 002289 750 KVADFGLSRL 759 (941)
Q Consensus 750 kl~DFGla~~ 759 (941)
.++||+.++.
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998753
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.79 E-value=3.3e-08 Score=99.60 Aligned_cols=125 Identities=26% Similarity=0.312 Sum_probs=82.1
Q ss_pred EEEEEEeCCCcEEEEEEeccCCc-------------h-------------hhHhHHHHHHHHHhcCCC--ceeeeeeccc
Q 002289 624 KVYKGILPDGTVVAVKRAQEGSL-------------Q-------------GEKEFLTEIQFLSRLHHR--NLVSLVGYCD 675 (941)
Q Consensus 624 ~Vy~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--nIv~l~~~~~ 675 (941)
.||.|...+|..+|||+.+.... . ......+|++.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999998999999998653110 0 013457899999999765 456666553
Q ss_pred cCCcEEEEEecCC--CCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHH-hhcCCCCCeEeccCCCCcEEEcCCCcEEEe
Q 002289 676 EEGEQMLVYEFMS--NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY-LHTEADPPVFHRDIKASNILLDHKFTAKVA 752 (941)
Q Consensus 676 ~~~~~~LV~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~y-LH~~~~~~ivH~DLkp~NILl~~~~~~kl~ 752 (941)
..+|||||++ |..+..+.... ++......+..+++..+.. +|..+ |+|+||.+.||+++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEE
Confidence 4579999998 55555444222 1123345567777775555 57888 9999999999999988 99999
Q ss_pred eecccccc
Q 002289 753 DFGLSRLA 760 (941)
Q Consensus 753 DFGla~~~ 760 (941)
|||.|...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99988654
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.75 E-value=1.7e-08 Score=124.09 Aligned_cols=178 Identities=23% Similarity=0.337 Sum_probs=92.1
Q ss_pred eeeEEEecCCC--CCccCCccccCCCCCCEEEcccCCCCCCCCCccCCccccceecccCccccCCCCcccCCcCccceee
Q 002289 83 HLRELQLLNLN--LSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (941)
Q Consensus 83 ~l~~L~L~~~~--l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (941)
.+++|-+..|. +.......|..++.|++|||++|.=-+.+|..+++|.+|++|+|++..++ .+|..+++|.+|.+||
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555554 22222223555666666666666544566666666666666666666666 6666666666666666
Q ss_pred cccccccccCCcccccccccceEecccccc--cccCchhccCCCccceeeccCCcCCCCCCccCCCCCCCC----EEecc
Q 002289 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSI--SGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL----ILQLD 234 (941)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l--~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~Ls 234 (941)
+..+.-...+|.....|.+|++|.+..-.. ....-..+..+.+|+.+....... .+-..+..+.+|. .+.+.
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~ 702 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIE 702 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhc
Confidence 666654444455555566666666654431 111122223333444333322221 0011112222222 22222
Q ss_pred CCcCCCCCcchhccCCCCCcEEEccCCCCcC
Q 002289 235 NNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (941)
Q Consensus 235 ~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 265 (941)
.+... ..+..+..+.+|+.|.+.++.+..
T Consensus 703 ~~~~~--~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 703 GCSKR--TLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred ccccc--eeecccccccCcceEEEEcCCCch
Confidence 22222 355677788888888888887753
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.75 E-value=5.4e-09 Score=85.07 Aligned_cols=59 Identities=32% Similarity=0.567 Sum_probs=26.2
Q ss_pred ccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccceEeccccc
Q 002289 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS 189 (941)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 189 (941)
+|++|+|++|+++...+..|.++++|++|+|++|.++...|+.|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333344444444444444444444444444444444444444443
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.70 E-value=1.1e-08 Score=83.22 Aligned_cols=61 Identities=33% Similarity=0.579 Sum_probs=35.2
Q ss_pred CccceeecccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcC
Q 002289 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNL 214 (941)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 214 (941)
|+|++|+|++|+|+...++.|.++++|++|+|++|+++...+..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3556666666666655555556666666666666666554455555555555555555543
No 491
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.56 E-value=3.4e-07 Score=94.48 Aligned_cols=136 Identities=22% Similarity=0.202 Sum_probs=95.2
Q ss_pred CCccceeeccCcEEEEEEEeCCCcEEEEEEeccCCc----------------------hhhHhHHHHHHHHHhcCCC--c
Q 002289 611 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL----------------------QGEKEFLTEIQFLSRLHHR--N 666 (941)
Q Consensus 611 y~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~--n 666 (941)
+.+.+.||-|--+.||.|..++|..+|||.=+.... .......+|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 345688999999999999999999999995321110 0123457899999998654 5
Q ss_pred eeeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC
Q 002289 667 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 746 (941)
Q Consensus 667 Iv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~ 746 (941)
|.+.+++ +..++||||++|--|...- ++....-.+...|++-+.-+-..| |||+|+.+-||+++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecC
Confidence 6655544 4678999999886554432 111222233444444444444677 9999999999999999
Q ss_pred CcEEEeeecccccc
Q 002289 747 FTAKVADFGLSRLA 760 (941)
Q Consensus 747 ~~~kl~DFGla~~~ 760 (941)
|.+.++||--+...
T Consensus 239 g~~~vIDwPQ~v~~ 252 (304)
T COG0478 239 GDIVVIDWPQAVPI 252 (304)
T ss_pred CCEEEEeCcccccC
Confidence 99999999766543
No 492
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.52 E-value=2.4e-06 Score=92.28 Aligned_cols=260 Identities=15% Similarity=0.162 Sum_probs=159.8
Q ss_pred ccceeeccCcEEEEEEEeCCCcEEEEEEeccCCchhhHhHHHHHHHHHhc-CCCceeeeeec------ccc-CCcEEEEE
Q 002289 613 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGY------CDE-EGEQMLVY 684 (941)
Q Consensus 613 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~------~~~-~~~~~LV~ 684 (941)
..+.||+|+-+.+|-.- .-...+-|+..........+ .+..|... .||-+-.=+.+ -.+ .....+.|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 35789999999998532 11223456666433332222 22233332 45543321111 112 22367788
Q ss_pred ecCCCC-CHHHHHh----hcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccc
Q 002289 685 EFMSNG-TLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 759 (941)
Q Consensus 685 e~~~~g-sL~~~l~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~ 759 (941)
..+.+. -..+++. ++.-...+|+..++.++.++.+.+-||..| .+-+|+.++|+|+++++.+.|.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 877654 2222222 233345899999999999999999999999 89999999999999999999987543221
Q ss_pred cCCCCCCCccccccccccccCCCcccccccc-----cCCCCchhHhHHHHHHHHHHHhC-CCCCCCCch---hHHHHHHH
Q 002289 760 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTG-MQPISHGKN---IVREVNIA 830 (941)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltG-~~Pf~~~~~---~~~~~~~~ 830 (941)
-. .........|...|.+||... +..-+...|-|.+|+++++++.| +.||..... .....+..
T Consensus 167 ~~--------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 167 NA--------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred cc--------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 11 123344567888999999865 34456679999999999999996 999964211 00000001
Q ss_pred HhhccchhhhcCCCC------CCC-hHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhHhhCC
Q 002289 831 YQSSMMFSVIDGNMG------SYP-SECVEKFIKLALKCCQDE--TDARPSMSEVMRELESIWNMMP 888 (941)
Q Consensus 831 ~~~~~~~~~~~~~~~------~~~-~~~~~~l~~l~~~c~~~~--p~~RPs~~~v~~~L~~~~~~~~ 888 (941)
.....+...-+...+ ..| .-.+..+..+...|+... +.-||+.+.++..|......+.
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 111111111111111 122 223457788888888664 5689999999998887765443
No 493
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.48 E-value=4.6e-08 Score=112.17 Aligned_cols=184 Identities=19% Similarity=0.320 Sum_probs=120.9
Q ss_pred HHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeeccccccCCCCCCCc--cccccccccccCCCcccccccccC
Q 002289 715 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI--VPAHVSTVVKGTPGYLDPEYFLTH 792 (941)
Q Consensus 715 ~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~ 792 (941)
+++.|+.|+|... .+||++|.|++|.++..+..||+.|+.+.....+..... ..............|.|||++.+.
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 4458999999755 499999999999999999999999998765443211000 001112223345689999999998
Q ss_pred CCCchhHhHHHHHHHHHHHh-CCCCCCCCchhHHHHHHHHhhccchhhhcCCCCCCChHHHHHHHHHHHHhcccCCCCCC
Q 002289 793 KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP 871 (941)
Q Consensus 793 ~~~~~sDVwSlG~ll~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP 871 (941)
..+.++|+||+|+++|.+.. |+.-+........+ .... ...+...-.+..+.+.++.+-+.+.+..++.-||
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-~~~~------~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp 257 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-SFSR------NLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRP 257 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchh-hhhh------cccccccccccccCcHHHHHHHHHHhcCCcccCc
Confidence 88999999999999999995 54444333221111 1000 0111111123455667777888888999999999
Q ss_pred CHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCC
Q 002289 872 SMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS 912 (941)
Q Consensus 872 s~~~v~~~L~~~~~~~~~~~~~~~dll~~~L~~dP~~R~sa 912 (941)
++..+... ..+.+....+..|+..+.++||.+--+.
T Consensus 258 ~~~~l~~~-----~ff~D~~~~aLrfLD~l~~kdn~qKs~F 293 (700)
T KOG2137|consen 258 TLDLLLSI-----PFFSDPGLKALRFLDDLPQKDNSQKSSF 293 (700)
T ss_pred chhhhhcc-----cccCCchhhhhhhcccccccCcHHHHHH
Confidence 77655432 2344455566778888888888655443
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=6.1e-09 Score=118.13 Aligned_cols=126 Identities=25% Similarity=0.307 Sum_probs=75.9
Q ss_pred ccceeecccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCc-cCCCCCCCCEEec
Q 002289 155 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP-ELSELPKLLILQL 233 (941)
Q Consensus 155 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L 233 (941)
.|...+.+.|.+. ....++.-++.|+.|+|++|++... +.+..++.|++|||++|.|+ .+|. ...++. |..|.|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4666677777766 5566666667777777777777633 25666777777777777776 3332 233333 777777
Q ss_pred cCCcCCCCCcchhccCCCCCcEEEccCCCCcCCCCCCCCCCccccc-ccCCcCEEEccCCcCC
Q 002289 234 DNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYL-LSLNITTIKLSNNKLT 295 (941)
Q Consensus 234 s~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l-~~~~L~~L~Ls~N~l~ 295 (941)
++|-++.. ..+.++++|+.|||++|-|.+. ..+.++ .+..|+.|+|.+|.+.
T Consensus 240 rnN~l~tL---~gie~LksL~~LDlsyNll~~h-------seL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL---RGIENLKSLYGLDLSYNLLSEH-------SELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh---hhHHhhhhhhccchhHhhhhcc-------hhhhHHHHHHHHHHHhhcCCccc
Confidence 77776531 3456677777777777766531 111111 1234566777777665
No 495
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.45 E-value=7.9e-08 Score=118.21 Aligned_cols=104 Identities=26% Similarity=0.293 Sum_probs=56.7
Q ss_pred CCCEEEcccCC--CCCCCCCccCCccccceecccCccccCCCCcccCCcCccceeecccccccccCCcccccccccceEe
Q 002289 107 YLTILDFMWNK--ISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (941)
Q Consensus 107 ~L~~L~Ls~N~--l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 184 (941)
+|++|-+..|. +..+.++.|..++.|++|||++|.=.+.+|..+++|-+|++|+|++..++ .+|..+.+|++|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 45555555554 33222333555566666666655544455666666666666666666555 5555555555666665
Q ss_pred cccccccccCchhccCCCccceeeccC
Q 002289 185 MNNNSISGQIPPELSRLPSLVHMLLDN 211 (941)
Q Consensus 185 L~~N~l~~~~p~~~~~l~~L~~L~L~~ 211 (941)
+..+.-...+|.....+.+|++|.+..
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPR 651 (889)
T ss_pred cccccccccccchhhhcccccEEEeec
Confidence 555554444444444555555555543
No 496
>PRK09902 hypothetical protein; Provisional
Probab=98.45 E-value=2e-06 Score=87.11 Aligned_cols=137 Identities=19% Similarity=0.185 Sum_probs=103.8
Q ss_pred eccCcEEEEEEEeCCCcEEEEEEeccC---C---chhhHhHHHHHHHHHhcCCCc--eeeeeeccc-c----CCcEEEEE
Q 002289 618 GQGGYGKVYKGILPDGTVVAVKRAQEG---S---LQGEKEFLTEIQFLSRLHHRN--LVSLVGYCD-E----EGEQMLVY 684 (941)
Q Consensus 618 G~G~fg~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~-~----~~~~~LV~ 684 (941)
|+||.+.|++-... |+.+-+|.-... + .-++..|.+|+..++++...+ +.+.. ++. . .-.-+||+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 67888889987764 447888876521 1 235678999999999985332 44444 332 1 12468999
Q ss_pred ecCCC-CCHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc--EEEeeeccccc
Q 002289 685 EFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSRL 759 (941)
Q Consensus 685 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~DLkp~NILl~~~~~--~kl~DFGla~~ 759 (941)
|-++| .+|.+++......+.+...+..+..++++.+.-||+.+ +.|+|+.+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97743 68999987655556778888899999999999999999 999999999999986666 99999987653
No 497
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.43 E-value=1.6e-08 Score=102.49 Aligned_cols=172 Identities=17% Similarity=0.237 Sum_probs=105.8
Q ss_pred ccccccceEecccccccccCch----hccCCCccceeeccCCcCCCCC----Ccc---------CCCCCCCCEEeccCCc
Q 002289 175 ANLNKTRHFHMNNNSISGQIPP----ELSRLPSLVHMLLDNNNLTGYL----PPE---------LSELPKLLILQLDNNN 237 (941)
Q Consensus 175 ~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~----p~~---------~~~l~~L~~L~Ls~N~ 237 (941)
..|++|+.++||+|-|....|. .+++-+.|++|.|++|.+.-.- ..+ ..+-+.|+......|+
T Consensus 89 lkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNR 168 (388)
T COG5238 89 LKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNR 168 (388)
T ss_pred hcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccch
Confidence 3344444444444444433332 2334455666666666554111 111 1234788899999998
Q ss_pred CCCCCc---chhccCCCCCcEEEccCCCCcCCCCCCCCCCcccccccCCcCEEEccCCcCCCC----cchhhcCCcccce
Q 002289 238 FEGTTI---PASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLLSLNITTIKLSNNKLTGT----IPSNFSGLPRLQR 310 (941)
Q Consensus 238 l~~~~~---p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~l~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~ 310 (941)
+..... ...|..-.+|+.+.+.+|.|. +..+..+--++..+..+|+.|||.+|-++-. +..++..++.|+.
T Consensus 169 lengs~~~~a~~l~sh~~lk~vki~qNgIr--pegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 169 LENGSKELSAALLESHENLKEVKIQQNGIR--PEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred hccCcHHHHHHHHHhhcCceeEEeeecCcC--cchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 874211 123444468999999999886 2223334444455667899999999998743 4556677888999
Q ss_pred eecccccCccCCCccccc-ccccCccccceEEccCCCCC
Q 002289 311 LFIANNSLSGSIPSSIWQ-SRTLNATETFILDFQNNNLT 348 (941)
Q Consensus 311 L~Ls~N~l~~~~p~~~~~-l~~l~~~~L~~L~Ls~N~l~ 348 (941)
|.+.+|-++...-.++.. ......++|+.|.+.+|.+.
T Consensus 247 L~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 247 LRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred ccccchhhccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 999999998666555433 34455667777777777664
No 498
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.41 E-value=1.6e-06 Score=89.74 Aligned_cols=106 Identities=25% Similarity=0.304 Sum_probs=83.2
Q ss_pred hHhHHHHHHHHHhcCCCc--eeeeeeccccC----CcEEEEEecCCCC-CHHHHHhhcCCCCccHHHHHHHHHHHHHHHH
Q 002289 649 EKEFLTEIQFLSRLHHRN--LVSLVGYCDEE----GEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 721 (941)
Q Consensus 649 ~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~----~~~~LV~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~ 721 (941)
.....+|.+.+..+.... +.+.+++.... ...++|+|++++. +|.+++..... .+......++.++++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 346788888888775333 44556655432 2458999999874 89999865333 556677889999999999
Q ss_pred HhhcCCCCCeEeccCCCCcEEEcCCC---cEEEeeeccccc
Q 002289 722 YLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRL 759 (941)
Q Consensus 722 yLH~~~~~~ivH~DLkp~NILl~~~~---~~kl~DFGla~~ 759 (941)
-||..| |+|+|+++.|||++.+. .+.++||+-++.
T Consensus 133 ~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999 99999999999999887 899999998764
No 499
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.29 E-value=4.9e-08 Score=89.34 Aligned_cols=133 Identities=23% Similarity=0.228 Sum_probs=87.6
Q ss_pred eeEEEecCCCCCcc--CCccccCCCCCCEEEcccCCCCCCCCCccC-CccccceecccCccccCCCCcccCCcCccceee
Q 002289 84 LRELQLLNLNLSGN--LSPEIGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (941)
Q Consensus 84 l~~L~L~~~~l~~~--~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (941)
+-.++|+++.|... .+..+....+|+..+|++|.+. ..|..|. ..+.++.|+|++|.|+ .+|..+..++.|+.|+
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 34456666665421 2234556667777788888887 4555554 3457888888888888 6777788888888888
Q ss_pred cccccccccCCcccccccccceEecccccccccCchhccCCCccceeeccCCcCCCCCCc
Q 002289 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP 220 (941)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 220 (941)
++.|.|. ..|..+..|.+|..|+..+|.+. .+|-.+..-...-...+.++.+.+.-+.
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 8888887 56666777888888888888777 4554433333344445566666655443
No 500
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.27 E-value=3.4e-06 Score=97.65 Aligned_cols=141 Identities=22% Similarity=0.276 Sum_probs=93.2
Q ss_pred ceeeccCcEEEEEEEeCCCcEEEEEEeccCCchh----------------------------------------hHhHHH
Q 002289 615 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----------------------------------------EKEFLT 654 (941)
Q Consensus 615 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~~ 654 (941)
+.|+.++-|.||+|++++|+.||||+.+..-... +-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6789999999999999999999999876421100 012344
Q ss_pred HHHHHHhcC-----CCceeeeeeccccCCcEEEEEecCCCCCHHHHHhhcCCCCccHHHHHHHHHHHHHH-HHHhhcCCC
Q 002289 655 EIQFLSRLH-----HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG-ILYLHTEAD 728 (941)
Q Consensus 655 E~~~l~~l~-----h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~g-L~yLH~~~~ 728 (941)
|..-+.+++ .+++.--.=|..-.+...|+|||++|-.+.+...-+. ..++ +..++..++++ +..+-..|
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d---~k~ia~~~~~~f~~q~~~dg- 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGID---RKELAELLVRAFLRQLLRDG- 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhcC-
Confidence 555444442 3333222222233567899999999999988742221 2233 22333333332 33333456
Q ss_pred CCeEeccCCCCcEEEcCCCcEEEeeeccccccCC
Q 002289 729 PPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 762 (941)
Q Consensus 729 ~~ivH~DLkp~NILl~~~~~~kl~DFGla~~~~~ 762 (941)
+.|.|..|.||+++.+|++.+.|||+...+..
T Consensus 286 --ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 --FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred --ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999876643
Done!