BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002298
(940 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1D0N|A Chain A, The Crystal Structure Of Calcium-Free Equine Plasma
Gelsolin.
pdb|1D0N|B Chain B, The Crystal Structure Of Calcium-Free Equine Plasma
Gelsolin
Length = 729
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 230/709 (32%), Positives = 347/709 (48%), Gaps = 57/709 (8%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 39 GDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 98
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKTXXXXXXT-RLYVCKGKRVVRMKQVPFARSSLN 120
ES FL YFK + +GGVASGF+ RL KG+RVVR +VP + S N
Sbjct: 99 FESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFN 158
Query: 121 HDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD 180
+ D FILD + IYQ+ G+ SN ER KA +V + +++ G V++ ++G
Sbjct: 159 NGDCFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGA------ 212
Query: 181 SGEFWVLFGGFAPIGKKVATEDDV---IAETTPPKLYSIEDSQVKIV------EGELSKS 231
E + G P + ATED V A KLY + + +V E ++
Sbjct: 213 EPEAMLQVLGPKPTLPE-ATEDTVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQG 271
Query: 232 MLENNKCYLLDRGSE--VFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGY 289
L + C++LD G + +FVW G+ +EERKAA + A +FIS + PK +++ + +G
Sbjct: 272 ALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFISKMDYPKQTQVSVLPEGG 331
Query: 290 ETYAFKSNFDSWPSGSTAPGAEEGRGKV-----AALLKQQGVGIKGMGKSTPTNEEVPPL 344
ET F+ F +W P EG G A +++ + ST +
Sbjct: 332 ETPLFRQFFKNWRD----PDQTEGLGLAYLSSHIAHVERVPFDAATLHTSTAMAAQHGMD 387
Query: 345 LEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSI 404
+G G+ ++WR+ GS K + G+FY GD YI+LY Y G R + + W G S
Sbjct: 388 DDGTGQKQIWRVEGSNKVPVDPATYGQFYGGDSYIILYNYRHGSR-QGQIIYNWQGAQST 446
Query: 405 EEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF--QPMVVVKGGLCSGYKKSL 462
+++ + L + L G PVQ R+ QG+EP ++LF +PM+V KGG
Sbjct: 447 QDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIVYKGGTSR------ 500
Query: 463 ADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGN 522
+ G T S L ++ +S + ++ A +LNS++ F+L++ S + W G
Sbjct: 501 -EGGQT----APASTRLFQVRASSSGATRAVEIIPKAGALNSNDAFVLKTPSAAYLWVGA 555
Query: 523 QSTFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEI------ 576
++ ++ A ++ L+ EG+E +FW LGGK +Y + SP +
Sbjct: 556 GASEAEKTGAQELLRVLRAQPV--QVAEGSEPDSFWEALGGKATY---RTSPRLKDKKMD 610
Query: 577 VRDPHLFTFSFNKGKFEVEEVYN-FSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQSA 635
P LF S G+F +EEV F Q +VFVWVG+ +EK A
Sbjct: 611 AHPPRLFACSNKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEA 670
Query: 636 FEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWDPTKATV 683
+ YID T + P+ V +G E P F F WD + +V
Sbjct: 671 LTSAKRYID--TDPAHRDRRTPITVVKQGFEPPSFVGWFLGWDDSYWSV 717
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 160/371 (43%), Gaps = 38/371 (10%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 2 EHPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHY 61
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 62 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 121
Query: 457 GYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTM 516
G+K + ++ + L+++ G + + +V S N+ +CF+L G+ +
Sbjct: 122 GFKHVVPNEVVVQR--------LLQVKGRRV--VRATEVPVSWESFNNGDCFILDLGNNI 171
Query: 517 FTWHGNQSTFEQQQLAAKVAEFLKPG-----VAIKHAKEGTESSAFWFPLGGKQSYTSKK 571
+ W G++S ++ A +V++ ++ + +EG E A LG K T +
Sbjct: 172 YQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVLGPKP--TLPE 229
Query: 572 VSPEIVRD-------PHLFTFSFNKGKFEVEEVYN---FSQXXXXXXX--XXXXXXHAEV 619
+ + V++ L+ S G V V + F+Q ++
Sbjct: 230 ATEDTVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKI 289
Query: 620 FVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSW-D 677
FVW G+ + +E+++A + ++I S + + + EG E P F F +W D
Sbjct: 290 FVWKGKQANMEERKAALKTASDFI----SKMDYPKQTQVSVLPEGGETPLFRQFFKNWRD 345
Query: 678 PTKATVQGNSF 688
P + G ++
Sbjct: 346 PDQTEGLGLAY 356
>pdb|2FGH|A Chain A, Atp Bound Gelsolin
pdb|2FGH|B Chain B, Atp Bound Gelsolin
Length = 731
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 230/709 (32%), Positives = 347/709 (48%), Gaps = 57/709 (8%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 41 GDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKTXXXXXXT-RLYVCKGKRVVRMKQVPFARSSLN 120
ES FL YFK + +GGVASGF+ RL KG+RVVR +VP + S N
Sbjct: 101 FESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFN 160
Query: 121 HDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD 180
+ D FILD + IYQ+ G+ SN ER KA +V + +++ G V++ ++G
Sbjct: 161 NGDCFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGA------ 214
Query: 181 SGEFWVLFGGFAPIGKKVATEDDV---IAETTPPKLYSIEDSQVKIV------EGELSKS 231
E + G P + ATED V A KLY + + +V E ++
Sbjct: 215 EPEAMLQVLGPKPTLPE-ATEDTVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQG 273
Query: 232 MLENNKCYLLDRGSE--VFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGY 289
L + C++LD G + +FVW G+ +EERKAA + A +FIS + PK +++ + +G
Sbjct: 274 ALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFISKMDYPKQTQVSVLPEGG 333
Query: 290 ETYAFKSNFDSWPSGSTAPGAEEGRGKV-----AALLKQQGVGIKGMGKSTPTNEEVPPL 344
ET F+ F +W P EG G A +++ + ST +
Sbjct: 334 ETPLFRQFFKNWRD----PDQTEGLGLAYLSSHIAHVERVPFDAATLHTSTAMAAQHGMD 389
Query: 345 LEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSI 404
+G G+ ++WR+ GS K + G+FY GD YI+LY Y G R + + W G S
Sbjct: 390 DDGTGQKQIWRVEGSNKVPVDPATYGQFYGGDSYIILYNYRHGSR-QGQIIYNWQGAQST 448
Query: 405 EEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF--QPMVVVKGGLCSGYKKSL 462
+++ + L + L G PVQ R+ QG+EP ++LF +PM+V KGG
Sbjct: 449 QDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIVYKGGTSR------ 502
Query: 463 ADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGN 522
+ G T S L ++ +S + ++ A +LNS++ F+L++ S + W G
Sbjct: 503 -EGGQT----APASTRLFQVRASSSGATRAVEIIPKAGALNSNDAFVLKTPSAAYLWVGA 557
Query: 523 QSTFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEI------ 576
++ ++ A ++ L+ EG+E +FW LGGK +Y + SP +
Sbjct: 558 GASEAEKTGAQELLRVLRAQPV--QVAEGSEPDSFWEALGGKATY---RTSPRLKDKKMD 612
Query: 577 VRDPHLFTFSFNKGKFEVEEVYN-FSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQSA 635
P LF S G+F +EEV F Q +VFVWVG+ +EK A
Sbjct: 613 AHPPRLFACSNKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEA 672
Query: 636 FEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWDPTKATV 683
+ YID T + P+ V +G E P F F WD + +V
Sbjct: 673 LTSAKRYID--TDPAHRDRRTPITVVKQGFEPPSFVGWFLGWDDSYWSV 719
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 160/371 (43%), Gaps = 38/371 (10%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 4 EHPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHY 63
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 64 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 123
Query: 457 GYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTM 516
G+K + ++ + L+++ G + + +V S N+ +CF+L G+ +
Sbjct: 124 GFKHVVPNEVVVQR--------LLQVKGRRV--VRATEVPVSWESFNNGDCFILDLGNNI 173
Query: 517 FTWHGNQSTFEQQQLAAKVAEFLKPG-----VAIKHAKEGTESSAFWFPLGGKQSYTSKK 571
+ W G++S ++ A +V++ ++ + +EG E A LG K T +
Sbjct: 174 YQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVLGPKP--TLPE 231
Query: 572 VSPEIVRD-------PHLFTFSFNKGKFEVEEVYN---FSQXXXXXXX--XXXXXXHAEV 619
+ + V++ L+ S G V V + F+Q ++
Sbjct: 232 ATEDTVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKI 291
Query: 620 FVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSW-D 677
FVW G+ + +E+++A + ++I S + + + EG E P F F +W D
Sbjct: 292 FVWKGKQANMEERKAALKTASDFI----SKMDYPKQTQVSVLPEGGETPLFRQFFKNWRD 347
Query: 678 PTKATVQGNSF 688
P + G ++
Sbjct: 348 PDQTEGLGLAY 358
>pdb|3FFN|A Chain A, Crystal Structure Of Calcium-Free Human Gelsolin
pdb|3FFN|B Chain B, Crystal Structure Of Calcium-Free Human Gelsolin
Length = 782
Score = 326 bits (836), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 227/698 (32%), Positives = 346/698 (49%), Gaps = 47/698 (6%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 92 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 151
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKTXXXXXXT-RLYVCKGKRVVRMKQVPFARSSLN 120
ES FL YFK + +GGVASGF+ RL+ KG+RVVR +VP + S N
Sbjct: 152 FESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLFQVKGRRVVRATEVPVSWESFN 211
Query: 121 HDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD 180
+ D FILD + I+Q+ G+NSN ER KA +V + +++ G V + ++G TE +
Sbjct: 212 NGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEG---TEPE 268
Query: 181 SGEFWVLFGGFA-PIGKKVATEDDVIAETTPPKLYSIEDS----QVKIV--EGELSKSML 233
+ VL A P G + ++D A KLY + + V +V E ++ L
Sbjct: 269 A-MLQVLGPKPALPAGTEDTAKEDA-ANRKLAKLYKVSNGAGTMSVSLVADENPFAQGAL 326
Query: 234 ENNKCYLLDRGSE--VFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYET 291
++ C++LD G + +FVW G+ EERKAA + A +FI+ + PK +++ + +G ET
Sbjct: 327 KSEDCFILDHGKDGKIFVWKGKQANTEERKAALKTASDFITKMDYPKQTQVSVLPEGGET 386
Query: 292 YAFKSNFDSW--PSGSTAPGAEEGRGKVAALLKQQGVGIKGMGKSTPTNEEVPPLLEGGG 349
FK F +W P + G +A +++ + ST + +G G
Sbjct: 387 PLFKQFFKNWRDPDQTDGLGLSYLSSHIAN-VERVPFDAATLHTSTAMAAQHGMDDDGTG 445
Query: 350 KMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQK 409
+ ++WRI GS K + G+FY GD YI+LY Y G R + + W G S +++
Sbjct: 446 QKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGR-QGQIIYNWQGAQSTQDEVA 504
Query: 410 MATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF--QPMVVVKGGLCSGYKKSLADKGL 467
+ L + L G PVQ R+ QG+EP ++LF +PM++ KGG + G
Sbjct: 505 ASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSR-------EGGQ 557
Query: 468 TDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFE 527
T S L ++ S + +V A +LNS++ F+L++ S + W G ++
Sbjct: 558 T----APASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEA 613
Query: 528 QQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEI------VRDPH 581
++ A ++ L+ EG+E FW LGGK +Y + SP + P
Sbjct: 614 EKTGAQELLRVLR--AQPVQVAEGSEPDGFWEALGGKAAY---RTSPRLKDKKMDAHPPR 668
Query: 582 LFTFSFNKGKFEVEEVYN-FSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQSAFEFGQ 640
LF S G+F +EEV Q +VFVWVG+ +EK A +
Sbjct: 669 LFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAK 728
Query: 641 NYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWD 677
YI+ T + P+ V +G E P F F WD
Sbjct: 729 RYIE--TDPANRDRRTPITVVKQGFEPPSFVGWFLGWD 764
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 160/369 (43%), Gaps = 34/369 (9%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 55 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 114
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 115 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 174
Query: 457 GYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTM 516
G+K + ++ + + ++R + +V S N+ +CF+L G+ +
Sbjct: 175 GFKHVVPNEVVVQRLFQVKGRRVVRAT----------EVPVSWESFNNGDCFILDLGNNI 224
Query: 517 FTWHGNQSTFEQQQLAAKVAEFL----KPGVAIKH-AKEGTESSAFWFPLGGKQSYTS-- 569
W G+ S ++ A +V++ + + G A H ++EGTE A LG K + +
Sbjct: 225 HQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEGTEPEAMLQVLGPKPALPAGT 284
Query: 570 ---KKVSPEIVRDPHLFTFSFNKGKFEVEEVYN---FSQXXXXXXX--XXXXXXHAEVFV 621
K + L+ S G V V + F+Q ++FV
Sbjct: 285 EDTAKEDAANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFV 344
Query: 622 WVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSW-DPT 679
W G+ +++E+++A + ++I T ++ + + + EG E P F F +W DP
Sbjct: 345 WKGKQANTEERKAALKTASDFI---TKMD-YPKQTQVSVLPEGGETPLFKQFFKNWRDPD 400
Query: 680 KATVQGNSF 688
+ G S+
Sbjct: 401 QTDGLGLSY 409
>pdb|3FFK|A Chain A, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|3FFK|D Chain D, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
Length = 377
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/309 (38%), Positives = 177/309 (57%), Gaps = 13/309 (4%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 43 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 102
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKTXXXXXXT-RLYVCKGKRVVRMKQVPFARSSLN 120
ES FL YFK + +GGVASGF+ RL+ KG+RVVR +VP + S N
Sbjct: 103 FESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLFQVKGRRVVRATEVPVSWESFN 162
Query: 121 HDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD 180
+ D FILD + I+Q+ G+NSN ER KA +V + +++ G V + ++G TE +
Sbjct: 163 NGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEG---TEPE 219
Query: 181 SGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIEDS----QVKIV--EGELSKSMLE 234
+ + P G + ++D A KLY + + V +V E ++ L+
Sbjct: 220 AMLQVLGPKPALPAGTEDTAKEDA-ANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALK 278
Query: 235 NNKCYLLDRGSE--VFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYETY 292
+ C++LD G + +FVW G+ EERKAA + A +FI+ + PK +++ + +G ET
Sbjct: 279 SEDCFILDHGKDGKIFVWKGKQANTEERKAALKTASDFITKMDYPKQTQVSVLPEGGETP 338
Query: 293 AFKSNFDSW 301
FK F +W
Sbjct: 339 LFKQFFKNW 347
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 161/374 (43%), Gaps = 36/374 (9%)
Query: 336 PTNEEVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDY 393
P E P L+ G + +++WR+ +P G F++GD Y++L T + Y
Sbjct: 2 PMVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQY 61
Query: 394 FLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKG 452
L W G + +++ A + + L GR VQ R QG E F+ F+ + KG
Sbjct: 62 DLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKG 121
Query: 453 GLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQS 512
G+ SG+K + ++ + + ++R + +V S N+ +CF+L
Sbjct: 122 GVASGFKHVVPNEVVVQRLFQVKGRRVVRAT----------EVPVSWESFNNGDCFILDL 171
Query: 513 GSTMFTWHGNQSTFEQQQLAAKVAEFL----KPGVAIKH-AKEGTESSAFWFPLGGKQSY 567
G+ + W G+ S ++ A +V++ + + G A H ++EGTE A LG K +
Sbjct: 172 GNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEGTEPEAMLQVLGPKPAL 231
Query: 568 -----TSKKVSPEIVRDPHLFTFSFNKGKFEVEEVYN---FSQXXXXXXX--XXXXXXHA 617
+ K + L+ S G V V + F+Q
Sbjct: 232 PAGTEDTAKEDAANRKLAKLYKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDG 291
Query: 618 EVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVT-EGNE-PCFCTTFFS 675
++FVW G+ +++E+++A + ++I T ++ PK V EG E P F F +
Sbjct: 292 KIFVWKGKQANTEERKAALKTASDFI---TKMD--YPKQTQVSVLPEGGETPLFKQFFKN 346
Query: 676 W-DPTKATVQGNSF 688
W DP + G S+
Sbjct: 347 WRDPDQTDGLGLSY 360
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 100/256 (39%), Gaps = 43/256 (16%)
Query: 284 RVIQGYETYAFKSNFDSWPSGSTAPGAEEGRGKVAALLKQQGVGIKGMGKSTPTNEEVPP 343
R +QG+E+ F F S G + +G VA+ G P V
Sbjct: 98 REVQGFESATFLGYFKS--------GLKYKKGGVAS----------GFKHVVPNEVVVQR 139
Query: 344 LLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDS 403
L + G+ R+ + + + E F +GDC+I+ + + W G +S
Sbjct: 140 LFQVKGR----RVVRATEVPVSWE---SFNNGDCFILDLGNN---------IHQWCGSNS 183
Query: 404 IEEDQKMATRLANTMC-NSLKGRPVQGRIFQGREPPQFVALFQPMVVVKGGLCSGYKKSL 462
++ AT+++ + N GR +G EP + + P + G K+
Sbjct: 184 NRYERLKATQVSKGIRDNERSGRARVHVSEEGTEPEAMLQVLGPKPALPAGTEDTAKEDA 243
Query: 463 ADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSG--STMFTWH 520
A++ L ++ + +S + N + +L S +CF+L G +F W
Sbjct: 244 ANRKLAKLYKVSNGAGTMSVSLVADENPFAQ------GALKSEDCFILDHGKDGKIFVWK 297
Query: 521 GNQSTFEQQQLAAKVA 536
G Q+ E+++ A K A
Sbjct: 298 GKQANTEERKAALKTA 313
>pdb|1RGI|G Chain G, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin
Length = 346
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 174/312 (55%), Gaps = 19/312 (6%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 40 GDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 99
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKTXXXXXXT-RLYVCKGKRVVRMKQVPFARSSLN 120
ES FL YFK + +GGVASGF+ RL KG+RVVR +VP + S N
Sbjct: 100 FESATFLGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFN 159
Query: 121 HDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD 180
+ D FILD + IYQ+ G+ SN ER KA +V + +++ G V++ ++G
Sbjct: 160 NGDCFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGA------ 213
Query: 181 SGEFWVLFGGFAPIGKKVATEDDV---IAETTPPKLYSIEDSQVKIV------EGELSKS 231
E + G P + ATED V A KLY + + +V E ++
Sbjct: 214 EPEAMLQVLGPKPTLPE-ATEDTVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQG 272
Query: 232 MLENNKCYLLDRGSE--VFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGY 289
L + C++LD G + +FVW G+ +EERKAA + A +FIS + PK +++ + +G
Sbjct: 273 ALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFISKMDYPKQTQVSVLPEGG 332
Query: 290 ETYAFKSNFDSW 301
ET F+ F +W
Sbjct: 333 ETPLFRQFFKNW 344
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 154/358 (43%), Gaps = 37/358 (10%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 3 EHPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHY 62
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 63 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 122
Query: 457 GYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTM 516
G+K + ++ + L+++ G + + +V S N+ +CF+L G+ +
Sbjct: 123 GFKHVVPNEVVVQR--------LLQVKGRRVV--RATEVPVSWESFNNGDCFILDLGNNI 172
Query: 517 FTWHGNQSTFEQQQLAAKVAEFLKPG-----VAIKHAKEGTESSAFWFPLGGKQSYTSKK 571
+ W G++S ++ A +V++ ++ + +EG E A LG K T +
Sbjct: 173 YQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVLGPKP--TLPE 230
Query: 572 VSPEIVRD-------PHLFTFSFNKGKFEVEEVYN---FSQXXXXXXX--XXXXXXHAEV 619
+ + V++ L+ S G V V + F+Q ++
Sbjct: 231 ATEDTVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKI 290
Query: 620 FVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSW 676
FVW G+ + +E+++A + ++I S + + + EG E P F F +W
Sbjct: 291 FVWKGKQANMEERKAALKTASDFI----SKMDYPKQTQVSVLPEGGETPLFRQFFKNW 344
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 132/334 (39%), Gaps = 58/334 (17%)
Query: 209 TPPKLYS---IEDSQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQ 265
PP LY D+ V + +L +L+ + Y W+G +E AA+
Sbjct: 29 VPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHY----------WLGNECSQDESGAAAI 78
Query: 266 AAEEFISSQNRPKSIRITRVIQGYETYAFKSNFDSWPSGSTAPGAEEGRGKVAALLKQQG 325
+ N ++++ R +QG+E+ F F S G + +G VA+
Sbjct: 79 FTVQLDDYLN-GRAVQ-HREVQGFESATFLGYFKS--------GLKYKKGGVAS------ 122
Query: 326 VGIKGMGKSTPTNEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYH 385
G P V LL+ G+ R+ + + + E F +GDC+I+
Sbjct: 123 ----GFKHVVPNEVVVQRLLQVKGR----RVVRATEVPVSWES---FNNGDCFIL----- 166
Query: 386 SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQ-GREPPQFVALF 444
D + + C G S ++ AT+++ + ++ + Q +F+ G EP + +
Sbjct: 167 --DLGNNIYQWC--GSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVL 222
Query: 445 QPMVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNS 504
P + K+ A++ L ++ + +S + N + +L S
Sbjct: 223 GPKPTLPEATEDTVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQ------GALRS 276
Query: 505 SECFLLQSG--STMFTWHGNQSTFEQQQLAAKVA 536
+CF+L G +F W G Q+ E+++ A K A
Sbjct: 277 EDCFILDHGKDGKIFVWKGKQANMEERKAALKTA 310
>pdb|3FG7|A Chain A, The Crystal Structure Of Villin Domain 6
pdb|3FG7|B Chain B, The Crystal Structure Of Villin Domain 6
Length = 398
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 170/339 (50%), Gaps = 19/339 (5%)
Query: 346 EGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIE 405
+G G+++VWRI + + +G FY GDCY++LYTY G+ K+ Y L W G + +
Sbjct: 59 DGSGEVQVWRIENLELVPVDSKWLGHFYGGDCYLLLYTYLIGE-KQHYLLYVWQGSQASQ 117
Query: 406 EDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLAD 464
++ + A + G PVQ R+ G+EPP +++F+ MVV +GG
Sbjct: 118 DEITASAYQAVILDQKYNGEPVQIRVPMGKEPPHLMSIFKGRMVVYQGGTSR-------- 169
Query: 465 KGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQS 524
T+ T S L ++ GT +N K +V A A LNS++ F+L++ S + W G
Sbjct: 170 ---TNNLETGPSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGC 226
Query: 525 TFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPE--IVRDPHL 582
+ +++++A VA+ + + EG E + FW LGGK Y + K E +V P L
Sbjct: 227 SGDEREMAKMVADTIS-RTEKQVVVEGQEPANFWMALGGKAPYANTKRLQEENLVITPRL 285
Query: 583 FTFSFNKGKFEVEEVYNFSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQSAFEFGQNY 642
F S G+F E+ +F+Q +VF W+G+ + +EK++A Q Y
Sbjct: 286 FECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANEEEKKAAATTAQEY 345
Query: 643 IDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWDPTK 680
+ T G P+ P+ V +G+E P F F +WDP K
Sbjct: 346 --LKTHPSGRDPETPIIVVKQGHEPPTFTGWFLAWDPFK 382
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 141/310 (45%), Gaps = 29/310 (9%)
Query: 2 GDCYIVLQT-TPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQ 60
GDCY++L T G+ YL ++ W G SQDE +A + V LD G VQ R
Sbjct: 88 GDCYLLLYTYLIGEKQHYL--LYVWQGSQASQDEITASAYQAVILDQKYNGEPVQIRVPM 145
Query: 61 GHESDKFLSYFKPCIIPLEGGVASGFRKTXXXXXXTRLYVCKGKRVVRMK--QVPFARSS 118
G E +S FK ++ +GG + TRL+ +G K +VP +
Sbjct: 146 GKEPPHLMSIFKGRMVVYQGGTSR--TNNLETGPSTRLFQVQGTGANNTKAFEVPARANF 203
Query: 119 LNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTE 178
LN +DVF+L T+ Y + G + ER A V + +V +G+
Sbjct: 204 LNSNDVFVLKTQSCCYLWCGKGCSGDEREMAKMVADTISRTEKQ------VVVEGQ---- 253
Query: 179 SDSGEFWVLFGGFAPIG--KKVATEDDVIAETTPPKLYSIEDSQVKIVEGEL---SKSML 233
+ FW+ GG AP K++ E+ VI P+L+ + + + E+ ++ L
Sbjct: 254 -EPANFWMALGGKAPYANTKRLQEENLVIT----PRLFECSNKTGRFLATEIPDFNQDDL 308
Query: 234 ENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGYET 291
E + +LLD +VF W+G+ EE+KAA+ A+E++ + R I V QG+E
Sbjct: 309 EEDDVFLLDVWDQVFFWIGKHANEEEKKAAATTAQEYLKTHPSGRDPETPIIVVKQGHEP 368
Query: 292 YAFKSNFDSW 301
F F +W
Sbjct: 369 PTFTGWFLAW 378
>pdb|1J72|A Chain A, Crystal Structure Of Mutant Macrophage Capping Protein
(Cap G) With Actin-Severing Activity In The Ca2+-Free
Form
Length = 347
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 160/312 (51%), Gaps = 22/312 (7%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y+VL P + + +H WIG+ +S+DE G A+ V+LD LGGR VQHRE+QG
Sbjct: 45 GDSYLVLHNGPEE----VSHLHLWIGQQSSRDEQGACAVLAVQLDDYLGGRPVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKTXXXXXXT-RLYVCKGKRVVRMKQVPFARSSLN 120
+ESD F+SYF + EGGV SGF+ RLY KGK+ +R + S N
Sbjct: 101 NESDLFMSYFPRGLKYQEGGVESGFKHVVPNEVVVQRLYQVKGKKNIRATERALNWDSFN 160
Query: 121 HDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD 180
D FILD I+ + G SNI ER KA ++ +++ G V IV DG+ E
Sbjct: 161 TGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEM- 219
Query: 181 SGEFWVLFGGFAPIGKKVATEDDVI---AETTPPKLYSIEDSQVKIVEGELSKS------ 231
+ G P K+ E+D+ A LY + D+ ++ +++ S
Sbjct: 220 -----IQVLGPKPALKEGNPEEDLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALE 274
Query: 232 MLENNKCYLLDRG--SEVFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGY 289
+L ++ C++LD G ++++W GR +ER+AA Q AE FIS + ++ + QG
Sbjct: 275 LLISDDCFVLDNGLCGKIYIWKGRKANEKERQAALQVAEGFISRMQYAPNTQVEILPQGR 334
Query: 290 ETYAFKSNFDSW 301
E+ FK F W
Sbjct: 335 ESPIFKQFFKDW 346
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 151/346 (43%), Gaps = 40/346 (11%)
Query: 351 MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKM 410
+ VWR+ + +E+ G F+SGD Y+VL H+G +E L W G+ S ++Q
Sbjct: 21 LHVWRVEKLKPVPVAQENQGVFFSGDSYLVL---HNGP-EEVSHLHLWIGQQSSRDEQGA 76
Query: 411 ATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF-QPMVVVKGGLCSGYKKSLADKGLTD 469
LA + + L GRPVQ R QG E F++ F + + +GG+ SG+K + ++ +
Sbjct: 77 CAVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKYQEGGVESGFKHVVPNEVVVQ 136
Query: 470 ETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQ 529
Y IR + +++ + S N+ +CF+L G +F W G +S ++
Sbjct: 137 RLYQVKGKKNIRATERALNWD----------SFNTGDCFILDLGQNIFAWCGGKSNILER 186
Query: 530 Q----LAAKVAEFLKPGVA-IKHAKEGTESSAFWFPLGGKQSYTSKKVSPE--------I 576
LA + + + G A ++ +G E + LG K + K+ +PE
Sbjct: 187 NKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPAL--KEGNPEEDLTADKAN 244
Query: 577 VRDPHLFTFSFNKGKFEVEEV-----YNFSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKE 631
+ L+ S G+ + +V + ++++W G+ + KE
Sbjct: 245 AQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKE 304
Query: 632 KQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSW 676
+Q+A + + +I S +P + + +G E P F F W
Sbjct: 305 RQAALQVAEGFI----SRMQYAPNTQVEILPQGRESPIFKQFFKDW 346
>pdb|1JHW|A Chain A, Ca2+-Binding Mimicry In The Crystal Structure Of The
Eu3+-Bound Mutant Human Macrophage Capping Protein Cap G
Length = 347
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 159/312 (50%), Gaps = 22/312 (7%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y+VL P + + +H WIG+ +S+DE G A+ V+LD LGGR VQHRE+QG
Sbjct: 45 GDSYLVLHNGPEE----VSHLHLWIGQQSSRDEQGACAVLAVQLDDYLGGRPVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKTXXXXXXT-RLYVCKGKRVVRMKQVPFARSSLN 120
+ESD F+SYF + EGGV SGF+ RLY KG + +R + S N
Sbjct: 101 NESDLFMSYFPRGLKYQEGGVESGFKHVVPNEVVVQRLYQVKGAKNIRATERALNWDSFN 160
Query: 121 HDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD 180
D FILD I+ + G SNI ER KA ++ +++ G V IV DG+ E
Sbjct: 161 TGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEM- 219
Query: 181 SGEFWVLFGGFAPIGKKVATEDDVI---AETTPPKLYSIEDSQVKIVEGELSKS------ 231
+ G P K+ E+D+ A LY + D+ ++ +++ S
Sbjct: 220 -----IQVLGPKPALKEGNPEEDLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALE 274
Query: 232 MLENNKCYLLDRG--SEVFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGY 289
+L ++ C++LD G ++++W GR +ER+AA Q AE FIS + ++ + QG
Sbjct: 275 LLISDDCFVLDNGLCGKIYIWKGRKANEKERQAALQVAEGFISRMQYAPNTQVEILPQGR 334
Query: 290 ETYAFKSNFDSW 301
E+ FK F W
Sbjct: 335 ESPIFKQFFKDW 346
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 151/346 (43%), Gaps = 40/346 (11%)
Query: 351 MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKM 410
+ VWR+ + +E+ G F+SGD Y+VL H+G +E L W G+ S ++Q
Sbjct: 21 LHVWRVEKLKPVPVAQENQGVFFSGDSYLVL---HNGP-EEVSHLHLWIGQQSSRDEQGA 76
Query: 411 ATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF-QPMVVVKGGLCSGYKKSLADKGLTD 469
LA + + L GRPVQ R QG E F++ F + + +GG+ SG+K + ++ +
Sbjct: 77 CAVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKYQEGGVESGFKHVVPNEVVVQ 136
Query: 470 ETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQ 529
Y IR + +++ + S N+ +CF+L G +F W G +S ++
Sbjct: 137 RLYQVKGAKNIRATERALNWD----------SFNTGDCFILDLGQNIFAWCGGKSNILER 186
Query: 530 Q----LAAKVAEFLKPGVA-IKHAKEGTESSAFWFPLGGKQSYTSKKVSPE--------I 576
LA + + + G A ++ +G E + LG K + K+ +PE
Sbjct: 187 NKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPAL--KEGNPEEDLTADKAN 244
Query: 577 VRDPHLFTFSFNKGKFEVEEV-----YNFSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKE 631
+ L+ S G+ + +V + ++++W G+ + KE
Sbjct: 245 AQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKE 304
Query: 632 KQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSW 676
+Q+A + + +I S +P + + +G E P F F W
Sbjct: 305 RQAALQVAEGFI----SRMQYAPNTQVEILPQGRESPIFKQFFKDW 346
>pdb|1NPH|A Chain A, Gelsolin Domains 4-6 In Active, Actin Free Conformation
Identifies Sites Of Regulatory Calcium Ions
Length = 329
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 161/344 (46%), Gaps = 33/344 (9%)
Query: 346 EGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIE 405
+G G+ ++WRI GS K + G+FY GD YI+LY Y G R + + W G S +
Sbjct: 2 DGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGR-QGQIIYNWQGAQSTQ 60
Query: 406 EDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF--QPMVVVKGGLCSGYKKSLA 463
++ + L + L G PVQ R+ QG+EP ++LF +PM++ KGG
Sbjct: 61 DEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSR------- 113
Query: 464 DKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQ 523
D G T SI L ++ +S + +V + +LNS++ F+L++ S + W G
Sbjct: 114 DGGQT----APASIRLFQVRASSSGATRAVEVMPKSGALNSNDAFVLKTPSAAYLWVGAG 169
Query: 524 STFEQQQLAAKVAEFLKPGVAIKHAK--EGTESSAFWFPLGGKQSYTSKKVSPEI----- 576
++ ++ A ++ + L+ +H + EG+E FW LGGK SY + SP +
Sbjct: 170 ASEAEKTAAQELLKVLRS----QHVQVEEGSEPDGFWEALGGKTSY---RTSPRLKDKKM 222
Query: 577 -VRDPHLFTFSFNKGKFEVEEVYN-FSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQS 634
P LF S G+F +EEV Q +VFVWVG+ +EK
Sbjct: 223 DAHPPRLFACSNRIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTE 282
Query: 635 AFEFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWD 677
A + YI+ T + P+ V +G E P F F WD
Sbjct: 283 ALTSAKRYIE--TDPANRDRRTPITVVRQGFEPPSFVGWFLGWD 324
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 149/312 (47%), Gaps = 31/312 (9%)
Query: 2 GDCYIVLQTTP--GKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHREL 59
GD YI+L G+ G +Y+ W G ++QDE +AI T +LD LGG VQ R +
Sbjct: 31 GDSYIILYNYRHGGRQGQIIYN---WQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVV 87
Query: 60 QGHESDKFLSYF--KPCIIPLEGGVASGFRKTXXXXXXTRLYVCKGKR--VVRMKQVPFA 115
QG E +S F KP II +GG + +T RL+ + R +V
Sbjct: 88 QGKEPAHLMSLFGGKPMII-YKGGTSRDGGQT--APASIRLFQVRASSSGATRAVEVMPK 144
Query: 116 RSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKL 175
+LN +D F+L T Y + GA ++ E+ A E+++ L+ ++ V++G
Sbjct: 145 SGALNSNDAFVLKTPSAAYLWVGAGASEAEKTAAQELLKVLRSQH-------VQVEEG-- 195
Query: 176 DTESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIEDS----QVKIVEGELSKS 231
S+ FW GG +D + + PP+L++ + ++ V GEL +
Sbjct: 196 ---SEPDGFWEALGGKTSYRTSPRLKDKKM-DAHPPRLFACSNRIGRFVIEEVPGELMQE 251
Query: 232 MLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGY 289
L + LLD +VFVWVG+ +Q EE+ A +A+ +I + NR + IT V QG+
Sbjct: 252 DLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVRQGF 311
Query: 290 ETYAFKSNFDSW 301
E +F F W
Sbjct: 312 EPPSFVGWFLGW 323
>pdb|1P8X|A Chain A, The Calcium-activated C-terminal Half Of Gelsolin
pdb|1P8X|B Chain B, The Calcium-activated C-terminal Half Of Gelsolin
pdb|1P8X|C Chain C, The Calcium-activated C-terminal Half Of Gelsolin
pdb|2FH1|A Chain A, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH1|B Chain B, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH1|C Chain C, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH2|A Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH2|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH2|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH3|A Chain A, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH3|B Chain B, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH3|C Chain C, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH4|A Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
pdb|2FH4|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
pdb|2FH4|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
Length = 344
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 155/342 (45%), Gaps = 29/342 (8%)
Query: 346 EGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIE 405
+G G+ ++WRI GS K + G+FY GD YI+LY Y G R + + W G S +
Sbjct: 4 DGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGR-QGQIIYNWQGAQSTQ 62
Query: 406 EDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF--QPMVVVKGGLCSGYKKSLA 463
++ + L + L G PVQ R+ QG+EP ++LF +PM++ KGG
Sbjct: 63 DEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSR------- 115
Query: 464 DKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQ 523
+ G T S L ++ S + +V A +LNS++ F+L++ S + W G
Sbjct: 116 EGGQT----APASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTG 171
Query: 524 STFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEI------V 577
++ ++ A ++ L+ EG+E FW LGGK +Y + SP +
Sbjct: 172 ASEAEKTGAQELLRVLR--AQPVQVAEGSEPDGFWEALGGKAAY---RTSPRLKDKKMDA 226
Query: 578 RDPHLFTFSFNKGKFEVEEVYN-FSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQSAF 636
P LF S G+F +EEV Q +VFVWVG+ +EK A
Sbjct: 227 HPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEAL 286
Query: 637 EFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWD 677
+ YI+ T + P+ V +G E P F F WD
Sbjct: 287 TSAKRYIE--TDPANRDRRTPITVVKQGFEPPSFVGWFLGWD 326
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 148/312 (47%), Gaps = 31/312 (9%)
Query: 2 GDCYIVLQTTP--GKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHREL 59
GD YI+L G+ G +Y+ W G ++QDE +AI T +LD LGG VQ R +
Sbjct: 33 GDSYIILYNYRHGGRQGQIIYN---WQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVV 89
Query: 60 QGHESDKFLSYF--KPCIIPLEGGVASGFRKTXXXXXXTRLYVCKGKR--VVRMKQVPFA 115
QG E +S F KP II +GG + +T TRL+ + R +V
Sbjct: 90 QGKEPAHLMSLFGGKPMII-YKGGTSREGGQT--APASTRLFQVRANSAGATRAVEVLPK 146
Query: 116 RSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKL 175
+LN +D F+L T Y + G ++ E+ A E+++ L+ + V + + +
Sbjct: 147 AGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLRAQ------PVQVAEGSEP 200
Query: 176 DTESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIEDS----QVKIVEGELSKS 231
D FW GG A +D + + PP+L++ + ++ V GEL +
Sbjct: 201 DG------FWEALGGKAAYRTSPRLKDKKM-DAHPPRLFACSNKIGRFVIEEVPGELMQE 253
Query: 232 MLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGY 289
L + LLD +VFVWVG+ +Q EE+ A +A+ +I + NR + IT V QG+
Sbjct: 254 DLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVKQGF 313
Query: 290 ETYAFKSNFDSW 301
E +F F W
Sbjct: 314 EPPSFVGWFLGW 325
>pdb|1H1V|G Chain G, Gelsolin G4-G6ACTIN COMPLEX
Length = 331
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 155/342 (45%), Gaps = 29/342 (8%)
Query: 346 EGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIE 405
+G G+ ++WRI GS K + G+FY GD YI+LY Y G R + + W G S +
Sbjct: 4 DGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYRHGGR-QGQIIYNWQGAQSTQ 62
Query: 406 EDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF--QPMVVVKGGLCSGYKKSLA 463
++ + L + L G PVQ R+ QG+EP ++LF +PM++ KGG
Sbjct: 63 DEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSR------- 115
Query: 464 DKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQ 523
+ G T S L ++ S + +V A +LNS++ F+L++ S + W G
Sbjct: 116 EGGQT----APASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTG 171
Query: 524 STFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEI------V 577
++ ++ A ++ L+ EG+E FW LGGK +Y + SP +
Sbjct: 172 ASEAEKTGAQELLRVLR--AQPVQVAEGSEPDGFWEALGGKAAY---RTSPRLKDKKMDA 226
Query: 578 RDPHLFTFSFNKGKFEVEEVYN-FSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQSAF 636
P LF S G+F +EEV Q +VFVWVG+ +EK A
Sbjct: 227 HPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEAL 286
Query: 637 EFGQNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWD 677
+ YI+ T + P+ V +G E P F F WD
Sbjct: 287 TSAKRYIE--TDPANRDRRTPITVVKQGFEPPSFVGWFLGWD 326
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 148/312 (47%), Gaps = 31/312 (9%)
Query: 2 GDCYIVLQTTP--GKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHREL 59
GD YI+L G+ G +Y+ W G ++QDE +AI T +LD LGG VQ R +
Sbjct: 33 GDSYIILYNYRHGGRQGQIIYN---WQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVV 89
Query: 60 QGHESDKFLSYF--KPCIIPLEGGVASGFRKTXXXXXXTRLYVCKGKR--VVRMKQVPFA 115
QG E +S F KP II +GG + +T TRL+ + R +V
Sbjct: 90 QGKEPAHLMSLFGGKPMII-YKGGTSREGGQT--APASTRLFQVRANSAGATRAVEVLPK 146
Query: 116 RSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKL 175
+LN +D F+L T Y + G ++ E+ A E+++ L+ + V + + +
Sbjct: 147 AGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLRAQ------PVQVAEGSEP 200
Query: 176 DTESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIEDS----QVKIVEGELSKS 231
D FW GG A +D + + PP+L++ + ++ V GEL +
Sbjct: 201 DG------FWEALGGKAAYRTSPRLKDKKM-DAHPPRLFACSNKIGRFVIEEVPGELMQE 253
Query: 232 MLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGY 289
L + LLD +VFVWVG+ +Q EE+ A +A+ +I + NR + IT V QG+
Sbjct: 254 DLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVKQGF 313
Query: 290 ETYAFKSNFDSW 301
E +F F W
Sbjct: 314 EPPSFVGWFLGW 325
>pdb|3FG6|A Chain A, Structure Of The C-terminus Of Adseverin
pdb|3FG6|C Chain C, Structure Of The C-terminus Of Adseverin
pdb|3FG6|G Chain G, Structure Of The C-terminus Of Adseverin
pdb|3FG6|E Chain E, Structure Of The C-terminus Of Adseverin
pdb|3FG6|F Chain F, Structure Of The C-terminus Of Adseverin
pdb|3FG6|H Chain H, Structure Of The C-terminus Of Adseverin
pdb|3FG6|D Chain D, Structure Of The C-terminus Of Adseverin
pdb|3FG6|B Chain B, Structure Of The C-terminus Of Adseverin
Length = 371
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 165/342 (48%), Gaps = 27/342 (7%)
Query: 346 EGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIE 405
+G GK+E+WR+ + + + + G+FY GDCYI+LYTY G + W G ++
Sbjct: 49 DGSGKVEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPRGQ-----IIYTWQGANATR 103
Query: 406 EDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF--QPMVVVKGGLCSGYKKSLA 463
++ + L + SL G+ VQ R+ QG+EP ++LF +P+++ YK +
Sbjct: 104 DELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLII--------YKNGTS 155
Query: 464 DKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQ-SGSTMFTWHGN 522
KG A L ++ + +VD A SLNS++ F+L+ ++ + W G
Sbjct: 156 KKG---GQAPAPPTRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGK 212
Query: 523 QSTFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEIVRD--P 580
++ E+++ A VA LK +EG E FW LGGK+ Y + + D P
Sbjct: 213 GASQEEEKGAEYVASVLK--CKTLRIQEGEEPEEFWNSLGGKKDYQTSPLLETQAEDHPP 270
Query: 581 HLFTFSFNKGKFEVEEVY-NFSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQSAFEFG 639
L+ S G+F +EE+ F+Q ++F+W+G+ + EK+ + +
Sbjct: 271 RLYGCSNKTGRFVIEEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSA 330
Query: 640 QNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWDPTK 680
+ Y++ T G + P+ + +G+E P F F WD +K
Sbjct: 331 KMYLE--TDPSGRDKRTPIVIIKQGHEPPTFTGWFLGWDSSK 370
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 33/313 (10%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GDCYI+L T P +G I+ W G + ++DE T+A TV+LD LGG+AVQ R QG
Sbjct: 78 GDCYIILYTYP-RGQI----IYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQG 132
Query: 62 HESDKFLSYF--KPCIIPLEGGVASGFRKTXXXXXXTRLYVCKGK--RVVRMKQVPFARS 117
E LS F KP II G G + TRL+ + + R+ +V +
Sbjct: 133 KEPVHLLSLFKDKPLIIYKNGTSKKGGQ---APAPPTRLFQVRRNLASITRIVEVDVDAN 189
Query: 118 SLNHDDVFILDT-KDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLD 176
SLN +DVF+L ++ Y + G ++ +E A V LK C + +G+
Sbjct: 190 SLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAEYVASVLK-------CKTLRIQEGE-- 240
Query: 177 TESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIEDSQ----VKIVEGELSKSM 232
+ EFW GG E AE PP+LY + ++ + GE ++
Sbjct: 241 ---EPEEFWNSLGGKKDYQTSPLLETQ--AEDHPPRLYGCSNKTGRFVIEEIPGEFTQDD 295
Query: 233 LENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGYE 290
L + LLD ++F+W+G+ E+K + ++A+ ++ + R K I + QG+E
Sbjct: 296 LAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSAKMYLETDPSGRDKRTPIVIIKQGHE 355
Query: 291 TYAFKSNFDSWPS 303
F F W S
Sbjct: 356 PPTFTGWFLGWDS 368
>pdb|2VIK|A Chain A, Refined Structure Of The Actin-Severing Domain Villin 14t,
Determined By Solution Nmr, Minimized Average Structure
pdb|2VIL|A Chain A, Refined Structure Of The Actin-Severing Domain Villin 14t,
Determined By Solution Nmr, 11 Structures
Length = 126
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GDCY++L T G + Y+IH+W+GK++SQDE G AAI T ++D LG AVQHRE+QG
Sbjct: 42 GDCYVLLSTRK-TGSGFSYNIHYWLGKNSSQDEQGAAAIYTTQMDEYLGSVAVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFR 87
HES+ F +YFK +I +GGVASG +
Sbjct: 101 HESETFRAYFKQGLIYKQGGVASGMK 126
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 351 MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKM 410
+++WRI +P + G FY GDCY++L T +G Y + W GK+S +++Q
Sbjct: 18 IQIWRIENMEMVPVPTKSYGNFYEGDCYVLLSTRKTGS-GFSYNIHYWLGKNSSQDEQGA 76
Query: 411 ATRLANTMCNSLKGRPVQGRIFQGREPPQFVALF-QPMVVVKGGLCSGYK 459
A M L VQ R QG E F A F Q ++ +GG+ SG K
Sbjct: 77 AAIYTTQMDEYLGSVAVQHREVQGHESETFRAYFKQGLIYKQGGVASGMK 126
>pdb|3TU5|B Chain B, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
Length = 297
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 59 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 118
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKT 89
ES FL YFK + +GGVAS RK
Sbjct: 119 FESATFLGYFKSGLKYKKGGVASKLRKV 146
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 22 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 81
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 82 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 141
Query: 457 GYKK 460
+K
Sbjct: 142 KLRK 145
>pdb|1T44|G Chain G, Structural Basis Of Actin Sequestration By Thymosin-B4:
Implications For Arp23 ACTIVATION
Length = 147
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 62/86 (72%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 41 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFR 87
ES FL YFK + +GGVASGF+
Sbjct: 101 FESATFLGYFKSGLKYKKGGVASGFK 126
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 338 NEEVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFL 395
+ E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 2 SHEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDL 61
Query: 396 CCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGL 454
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+
Sbjct: 62 HYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGV 121
Query: 455 CSGYK 459
SG+K
Sbjct: 122 ASGFK 126
>pdb|1P8Z|G Chain G, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Residues Val26-Glu156
Length = 136
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 41 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKT 89
ES FL YFK + +GGVASGF+
Sbjct: 101 FESATFLGYFKSGLKYKKGGVASGFKHV 128
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 4 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 63
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 64 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 123
Query: 457 GYKKSLADK 465
G+K + ++
Sbjct: 124 GFKHVVPNE 132
>pdb|1D4X|G Chain G, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin
Complexed With Human Gelsolin Segment 1 At 1.75 A
Resolution
Length = 126
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 62/86 (72%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 41 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFR 87
ES FL YFK + +GGVASGF+
Sbjct: 101 FESATFLGYFKSGLKYKKGGVASGFK 126
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 4 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 63
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 64 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 123
Query: 457 GYK 459
G+K
Sbjct: 124 GFK 126
>pdb|2FF3|A Chain A, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif
Hybrid In Complex With Actin
pdb|2FF6|G Chain G, Crystal Structure Of Gelsolin Domain 1:ciboulot Domain 2
Hybrid In Complex With Actin
Length = 150
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 63 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 122
Query: 62 HESDKFLSYFKPCIIPLEGGVASGFRKT 89
ES FL YFK + +GGVASGF+
Sbjct: 123 FESATFLGYFKSGLKYKKGGVASGFKHV 150
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 26 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 85
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 86 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 145
Query: 457 GYK 459
G+K
Sbjct: 146 GFK 148
>pdb|1YAG|G Chain G, Structure Of The Yeast Actin-human Gelsolin Segment 1
Complex
pdb|1YVN|G Chain G, The Yeast Actin Val 159 Asn Mutant Complex With Human
Gelsolin Segment 1.
pdb|1MDU|A Chain A, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1MDU|D Chain D, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1NLV|G Chain G, Crystal Structure Of Dictyostelium Discoideum Actin
Complexed With Ca Atp And Human Gelsolin Segment 1
pdb|1NM1|G Chain G, Crystal Structure Of D. Dicsoideum Actin Complexed With
Gelsolin Segment 1 And Mg Atp At 1.8 A Resolution
pdb|1NMD|G Chain G, Crystal Structure Of D. Discoideum Actin-Gelsolin Segment
1 Complex Crystallized In Presence Of Lithium Atp
pdb|3CJB|G Chain G, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Gelsolin-Segment 1
pdb|3CJC|G Chain G, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Dnase I And Gelsolin-Segment 1
Length = 125
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 61/85 (71%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 41 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGF 86
ES FL YFK + +GGVASGF
Sbjct: 101 FESATFLGYFKSGLKYKKGGVASGF 125
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 4 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 63
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 64 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 123
Query: 457 GY 458
G+
Sbjct: 124 GF 125
>pdb|3CI5|G Chain G, Complex Of Phosphorylated Dictyostelium Discoideum Actin
With Gelsolin
Length = 126
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 61/85 (71%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 42 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 101
Query: 62 HESDKFLSYFKPCIIPLEGGVASGF 86
ES FL YFK + +GGVASGF
Sbjct: 102 FESATFLGYFKSGLKYKKGGVASGF 126
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 5 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 64
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 65 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 124
Query: 457 GY 458
G+
Sbjct: 125 GF 126
>pdb|3CIP|G Chain G, Complex Of Dictyostelium Discoideum Actin With Gelsolin
Length = 128
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 61/85 (71%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 44 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 103
Query: 62 HESDKFLSYFKPCIIPLEGGVASGF 86
ES FL YFK + +GGVASGF
Sbjct: 104 FESATFLGYFKSGLKYKKGGVASGF 128
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 7 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 66
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 67 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 126
Query: 457 GY 458
G+
Sbjct: 127 GF 128
>pdb|1EQY|S Chain S, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Domain 1
pdb|1ESV|S Chain S, Complex Between Latrunculin A:rabbit Muscle Alpha
Actin:human Gelsolin Domain 1
Length = 125
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 61/85 (71%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 41 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 100
Query: 62 HESDKFLSYFKPCIIPLEGGVASGF 86
ES FL YFK + +GGVASGF
Sbjct: 101 FESATFLGYFKSGLKYKKGGVASGF 125
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 4 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTCLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 63
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 64 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 123
Query: 457 GY 458
G+
Sbjct: 124 GF 125
>pdb|1C0F|S Chain S, Crystal Structure Of Dictyostelium Caatp-Actin In Complex
With Gelsolin Segment 1
pdb|1C0G|S Chain S, Crystal Structure Of 1:1 Complex Between Gelsolin Segment
1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT
228: Q228kT229AA230YE360H)
pdb|1DEJ|S Chain S, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA
Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN
Complex With Human Gelsolin Segment 1
pdb|3A5L|S Chain S, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5M|S Chain S, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5N|S Chain S, Crystal Structure Of A Dictyostelium P109a Ca2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5O|S Chain S, Crystal Structure Of A Dictyostelium P109i Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 127
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 61/85 (71%)
Query: 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQG 61
GD Y++L+T + G YD+H+W+G + SQDE+G AAI TV+LD L GRAVQHRE+QG
Sbjct: 43 GDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQG 102
Query: 62 HESDKFLSYFKPCIIPLEGGVASGF 86
ES FL YFK + +GGVASGF
Sbjct: 103 FESATFLGYFKSGLKYKKGGVASGF 127
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 340 EVPPLLEGGGK--MEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCC 397
E P L+ G + +++WR+ +P G F++GD Y++L T + Y L
Sbjct: 6 EHPEFLKAGKEPGLQIWRVEKFDLVPVPTCLYGDFFTGDAYVILKTVQLRNGNLQYDLHY 65
Query: 398 WFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCS 456
W G + +++ A + + L GR VQ R QG E F+ F+ + KGG+ S
Sbjct: 66 WLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVAS 125
Query: 457 GY 458
G+
Sbjct: 126 GF 127
>pdb|1SVQ|A Chain A, Structure Of Severin Domain 2 In Solution
pdb|1SVR|A Chain A, Structure Of Severin Domain 2 In Solution
Length = 114
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 84 SGFRKTXXXXXXTRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNI 143
SGF RL G + ++ +VP A SSLN D F+LD IYQFNG+ S+
Sbjct: 1 SGFNHVKPTEYKPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSP 60
Query: 144 QERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD-SGEFWVLFGGFAPIGKKVAT 200
QE+ KA EV + + + G V + +T+SD EFW L GG I K T
Sbjct: 61 QEKNKAAEVARAI-DAERKGLPKVEVF----CETDSDIPAEFWKLLGGKGAIAAKHET 113
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 479 LIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEF 538
L+ ISG N K +V +SLNS +CFLL +G T++ ++G++S+ +++ AA+VA
Sbjct: 15 LLHISGDK--NAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARA 72
Query: 539 LK------PGVAIKHAKEGTESSAFWFPLGGKQSYTSK 570
+ P V + + + FW LGGK + +K
Sbjct: 73 IDAERKGLPKVEVFCETDSDIPAEFWKLLGGKGAIAAK 110
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 211 PKLYSIE-DSQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAA 267
P+L I D K+ E L+ S L + C+LLD G ++ + G + +E+ A++ A
Sbjct: 13 PRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVA 70
>pdb|1SVY|A Chain A, Severin Domain 2, 1.75 Angstrom Crystal Structure
Length = 114
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 84 SGFRKTXXXXXXTRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNI 143
SGF RL G + ++ +VP A SSLN D F+LD IYQFNG+ S+
Sbjct: 1 SGFNHVKPTEYKPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSP 60
Query: 144 QERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESD-SGEFWVLFGGFAPIGKKVAT 200
QE+ KA EV + + + G V + +T+SD EFW L GG I K T
Sbjct: 61 QEKNKAAEVARAI-DAERKGLPKVEVFX----ETDSDIPAEFWKLLGGKGAIAAKHET 113
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 479 LIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEF 538
L+ ISG N K +V +SLNS +CFLL +G T++ ++G++S+ +++ AA+VA
Sbjct: 15 LLHISGDK--NAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARA 72
Query: 539 LK------PGVAIKHAKEGTESSAFWFPLGGKQSYTSK 570
+ P V + + + FW LGGK + +K
Sbjct: 73 IDAERKGLPKVEVFXETDSDIPAEFWKLLGGKGAIAAK 110
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 211 PKLYSIE-DSQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAA 267
P+L I D K+ E L+ S L + C+LLD G ++ + G + +E+ A++ A
Sbjct: 13 PRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVA 70
>pdb|1KCQ|A Chain A, Human Gelsolin Domain 2 With A Cd2+ Bound
Length = 104
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 97 RLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFL 156
RL+ KG+RVVR +VP + S N+ D FILD + I+Q+ G+NSN ER KA +V + +
Sbjct: 4 RLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGI 63
Query: 157 KEKYHDGNCNVAIVDDG 173
++ G V + ++G
Sbjct: 64 RDNERSGRARVHVSEEG 80
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 501 SLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFL----KPGVAIKH-AKEGTESS 555
S N+ +CF+L G+ + W G+ S ++ A +V++ + + G A H ++EGTE
Sbjct: 25 SFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEGTEPE 84
Query: 556 AFWFPLGGK 564
A LG K
Sbjct: 85 AMLQVLGPK 93
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 212 KLYSIEDSQV-KIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAE 268
+L+ ++ +V + E +S N C++LD G+ + W G + ER A+Q ++
Sbjct: 4 RLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSK 61
>pdb|2RJV|A Chain A, Crystal Structure Of The H41y Mutant Of Villin Headpiece,
P 21 21 21 Space Group
pdb|2RJW|A Chain A, The Crystal Structure Of The H41y Mutant Of Villin
Headpiece, P61 Space Group.
pdb|2RJW|B Chain B, The Crystal Structure Of The H41y Mutant Of Villin
Headpiece, P61 Space Group
Length = 67
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 876 TSRSTFSYDQL--KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQ 933
T TF D L A D P G+D R+E YLSDE+F+ VFGM + AF LP WKQ
Sbjct: 2 TKLETFPLDVLVNTAAEDLP-RGVDPSRKENYLSDEDFKAVFGMTRSAFANLPLWKQQNL 60
Query: 934 KKKFDLF 940
KK+ LF
Sbjct: 61 KKEKGLF 67
>pdb|1YU5|X Chain X, Crystal Structure Of The Headpiece Domain Of Chicken
Villin
pdb|2RJY|A Chain A, Crystal Structure Of Villin Headpiece, P21 21 21 Space
Group
pdb|2RJX|A Chain A, Crystal Structure Of The Headpiece Domain Of Chicken
Villin, P61 Space Group
pdb|2RJX|B Chain B, Crystal Structure Of The Headpiece Domain Of Chicken
Villin, P61 Space Group
pdb|1QQV|A Chain A, Solution Structure Of The Headpiece Domain Of Chicken
Villin
Length = 67
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 876 TSRSTFSYDQL--KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQ 933
T TF D L A D P G+D R+E +LSDE+F+ VFGM + AF LP WKQ
Sbjct: 2 TKLETFPLDVLVNTAAEDLP-RGVDPSRKENHLSDEDFKAVFGMTRSAFANLPLWKQQNL 60
Query: 934 KKKFDLF 940
KK+ LF
Sbjct: 61 KKEKGLF 67
>pdb|3MYC|A Chain A, Crystal Structure Of Hp67 H41f - P212121
pdb|3MYA|A Chain A, Crystal Structure Of Hp67 H41f - P61
pdb|3MYA|B Chain B, Crystal Structure Of Hp67 H41f - P61
Length = 67
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 876 TSRSTFSYDQL--KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQ 933
T TF D L A D P G+D R+E +LSDE+F+ VFGM + AF LP WKQ
Sbjct: 2 TKLETFPLDVLVNTAAEDLP-RGVDPSRKENFLSDEDFKAVFGMTRSAFANLPLWKQQNL 60
Query: 934 KKKFDLF 940
KK+ LF
Sbjct: 61 KKEKGLF 67
>pdb|1YU8|X Chain X, Crystal Structure Of The R37a Mutant Of Villin Headpiece
Length = 67
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 876 TSRSTFSYDQL--KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQ 933
T TF D L A D P G+D +E +LSDE+F+ VFGM + AF LP WKQ
Sbjct: 2 TKLETFPLDVLVNTAAEDLP-RGVDPSAKENHLSDEDFKAVFGMTRSAFANLPLWKQQNL 60
Query: 934 KKKFDLF 940
KK+ LF
Sbjct: 61 KKEKGLF 67
>pdb|1YU7|X Chain X, Crystal Structure Of The W64y Mutant Of Villin Headpiece
Length = 67
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 876 TSRSTFSYDQL--KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQ 933
T TF D L A D P G+D R+E +LSDE+F+ VFGM + AF LP +KQ
Sbjct: 2 TKLETFPLDVLVNTAAEDLP-RGVDPSRKENHLSDEDFKAVFGMTRSAFANLPLYKQQNL 60
Query: 934 KKKFDLF 940
KK+ LF
Sbjct: 61 KKEKGLF 67
>pdb|2LLF|A Chain A, Sixth Gelsolin-like Domain Of Villin In 5 Mm Cacl2
Length = 107
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 211 PKLYSIEDSQVKIVEGEL---SKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAA 267
P+L+ + + + E+ ++ L+ N YLLD ++F W+G+ E++AA++ A
Sbjct: 1 PRLFECSNKTGRFLATEIVDFTQDDLDENDVYLLDTWDQIFFWIGKGANESEKEAAAETA 60
Query: 268 EEFISSQ--NRPKSIRITRVIQGYETYAFKSNFDSW 301
+E++ S +R I V QG+E F F +W
Sbjct: 61 QEYLRSHPGSRDLDTPIIVVKQGFEPPTFTGWFMAW 96
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 580 PHLFTFSFNKGKFEVEEVYNFSQXXXXXXXXXXXXXHAEVFVWVGQSVDSKEKQSAFEFG 639
P LF S G+F E+ +F+Q ++F W+G+ + EK++A E
Sbjct: 1 PRLFECSNKTGRFLATEIVDFTQDDLDENDVYLLDTWDQIFFWIGKGANESEKEAAAETA 60
Query: 640 QNYIDMATSLEGLSPKVPLYKVTEGNE-PCFCTTFFSWDP 678
Q Y+ L P+ V +G E P F F +WDP
Sbjct: 61 QEYLRSHPGSRDLD--TPIIVVKQGFEPPTFTGWFMAWDP 98
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 97 RLYVCKGK--RVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQ 154
RL+ C K R + + V F + L+ +DV++LDT D+I+ + G +N E+ A E Q
Sbjct: 2 RLFECSNKTGRFLATEIVDFTQDDLDENDVYLLDTWDQIFFWIGKGANESEKEAAAETAQ 61
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 492 TEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVA-EFLK--PG-----V 543
TE VD L+ ++ +LL + +F W G + +++ AA+ A E+L+ PG
Sbjct: 16 TEIVDFTQDDLDENDVYLLDTWDQIFFWIGKGANESEKEAAAETAQEYLRSHPGSRDLDT 75
Query: 544 AIKHAKEGTESSAF--WFPLGGKQSYTSKK 571
I K+G E F WF ++ +K
Sbjct: 76 PIIVVKQGFEPPTFTGWFMAWDPLCWSDRK 105
>pdb|3NKJ|A Chain A, Crystal Structure Of Hp67 L61g
Length = 67
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 876 TSRSTFSYDQL--KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQ 933
T TF D L A D P G+D R+E +LSDE+F+ VFGM + AF P WKQ
Sbjct: 2 TKLETFPLDVLVNTAAEDLP-RGVDPSRKENHLSDEDFKAVFGMTRSAFANGPLWKQQNL 60
Query: 934 KKKFDLF 940
KK+ LF
Sbjct: 61 KKEKGLF 67
>pdb|3MYE|X Chain X, Crystal Structure Of Hp67 L61gl
Length = 68
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 876 TSRSTFSYDQL--KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYK-LPKWKQDM 932
T TF D L A D P G+D R+E +LSDE+F+ VFGM + AF LP WKQ
Sbjct: 2 TKLETFPLDVLVNTAAEDLP-RGVDPSRKENHLSDEDFKAVFGMTRSAFANGLPLWKQQN 60
Query: 933 QKKKFDLF 940
KK+ LF
Sbjct: 61 LKKEKGLF 68
>pdb|1ZV6|A Chain A, Nmr Structure Of The Human Dematin Headpiece S74e Mutant
Length = 68
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 887 KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
K R+ P G+D R E +LS E+F VF M E F KL WK++ KKK +LF
Sbjct: 16 KGRTKLP-PGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKAELF 68
>pdb|2L3X|A Chain A, Villin Head Piece Domain Of Human Ablim2
Length = 67
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 897 IDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
+D R E +LS EEFQ VFGM E F +L WK++ KKK LF
Sbjct: 24 VDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKKKALLF 67
>pdb|1QZP|A Chain A, Nmr Structure Of The Human Dematin Headpiece Domain
Length = 68
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 887 KARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
K R+ P G+D R E +LS E+F VF M E F KL WK++ KKK LF
Sbjct: 16 KGRTKLP-PGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 68
>pdb|2PPZ|A Chain A, Nmr Solution Structure Of The Villin Headpiece Mutant G34l
Length = 36
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LSDE+F+ VFGM + AF LP WKQ KK+ LF
Sbjct: 2 LSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKLLF 36
>pdb|1YRF|A Chain A, Chicken Villin Subdomain Hp-35, N68h, Ph6.7
pdb|1YRI|A Chain A, Chicken Villin Subdomain Hp-35, N68h, Ph6.4
Length = 35
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LSDE+F+ VFGM + AF LP WKQ KK+ LF
Sbjct: 1 LSDEDFKAVFGMTRSAFANLPLWKQQHLKKEKGLF 35
>pdb|1VII|A Chain A, Thermostable Subdomain From Chicken Villin Headpiece, Nmr,
Minimized Average Structure
Length = 36
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LSDE+F+ VFGM + AF LP WKQ KK+ LF
Sbjct: 2 LSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKGLF 36
>pdb|2K6M|S Chain S, Solution Structure Of Human Supervillin Headpiece
pdb|2K6N|A Chain A, Solution Structure Of Human Supervillin Headpiece,
Minimized Average
Length = 67
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 896 GIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
G+D + E YL+DE+F+ M ++ + LP WKQ KK LF
Sbjct: 23 GVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGLF 67
>pdb|2F4K|A Chain A, Chicken Villin Subdomain Hp-35, K65(Nle), N68h, K70(Nle),
Ph9
Length = 35
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LSDE+F+ VFGM + AF LP W Q K+ LF
Sbjct: 1 LSDEDFKAVFGMTRSAFANLPLWXQQHLXKEKGLF 35
>pdb|1WY3|A Chain A, Chicken Villin Subdomain Hp-35, K65(Nle), N68h, Ph7.0
pdb|1WY4|A Chain A, Chicken Villin Subdomain Hp-35, K65(nle), N68h, Ph5.1
Length = 35
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LSDE+F+ VFGM + AF LP W Q KK+ LF
Sbjct: 1 LSDEDFKAVFGMTRSAFANLPLWXQQHLKKEKGLF 35
>pdb|1UJS|A Chain A, Solution Structure Of The Villin Headpiece Domain Of Human
Actin-Binding Lim Protein Homologue (Kiaa0843 Protein)
Length = 88
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 897 IDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
+D R E +LS EEF VFGM F +L WK++ KK+ LF
Sbjct: 39 VDRTRLERHLSQEEFYQVFGMTISEFDRLALWKRNELKKQARLF 82
>pdb|2JM0|A Chain A, Solution Structure Of Chicken Villin Headpiece Subdomain
Containing A Fluorinated Side Chain In The Core
Length = 35
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LSDE+F+ V GM + AF LP W+Q +++ LF
Sbjct: 1 LSDEDFRAVXGMTRSAFANLPLWRQQNLRRERGLF 35
>pdb|3TRV|A Chain A, Crystal Structure Of Quasiracemic Villin Headpiece
Subdomain Containing (F5phe17) Substitution
Length = 35
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LSDE+F+ VFGM + A LP WKQ KK+ LF
Sbjct: 1 LSDEDFKAVFGMTRSAXANLPLWKQQHLKKEKGLF 35
>pdb|3TJW|B Chain B, Crystal Structure Of Quasiracemic Villin Headpiece
Subdomain Containing (F5phe10) Substitution
Length = 34
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKK 935
LSDE+F+ V GM + AF LP WKQ KK
Sbjct: 1 LSDEDFKAVXGMTRSAFANLPLWKQQHLKK 30
>pdb|3TRW|A Chain A, Crystal Structure Of Racemic Villin Headpiece Subdomain
Crystallized In Space Group P-1
pdb|3TRW|D Chain D, Crystal Structure Of Racemic Villin Headpiece Subdomain
Crystallized In Space Group P-1
Length = 35
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LSDE+F+ VFGM + AF LP KQ KK+ LF
Sbjct: 1 LSDEDFKAVFGMTRSAFANLPLAKQQHLKKEKGLF 35
>pdb|1UND|A Chain A, Solution Structure Of The Human Advillin C-Terminal
Headpiece Subdomain
Length = 37
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 905 YLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
YLS+++F +VFG+ + F LP WKQ KK+ LF
Sbjct: 2 YLSEQDFVSVFGITRGQFAALPGWKQLQMKKEKGLF 37
>pdb|1UNC|A Chain A, Solution Structure Of The Human Villin C-Terminal
Headpiece Subdomain
Length = 36
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940
LS E+F FGM AF LP+WKQ KK+ LF
Sbjct: 2 LSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 36
>pdb|1UB5|L Chain L, Crystal Structure Of Antibody 19g2 With Hapten At 100k
pdb|1UB5|B Chain B, Crystal Structure Of Antibody 19g2 With Hapten At 100k
Length = 214
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%)
Query: 338 NEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYH------------ 385
N E+PP GG K+E+ R + + S+ + SG +V + +
Sbjct: 96 NLELPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 155
Query: 386 SGDRKEDYFLCCWFGKDSIEEDQKMATRLANT 417
G +++ L W +DS + M++ L T
Sbjct: 156 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 187
>pdb|3CFB|L Chain L, High-Resolution Structure Of Blue Fluorescent Antibody
Ep2-19g2 In Complex With Stilbene Hapten At 100k
pdb|3CFB|A Chain A, High-Resolution Structure Of Blue Fluorescent Antibody
Ep2-19g2 In Complex With Stilbene Hapten At 100k
pdb|3CFC|L Chain L, High-Resolution Structure Of Blue Fluorescent Antibody
Ep2-19g2
Length = 219
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%)
Query: 338 NEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYH------------ 385
N E+PP GG K+E+ R + + S+ + SG +V + +
Sbjct: 96 NLELPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 155
Query: 386 SGDRKEDYFLCCWFGKDSIEEDQKMATRLANT 417
G +++ L W +DS + M++ L T
Sbjct: 156 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 187
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,327,109
Number of Sequences: 62578
Number of extensions: 1065037
Number of successful extensions: 2202
Number of sequences better than 100.0: 56
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1966
Number of HSP's gapped (non-prelim): 95
length of query: 940
length of database: 14,973,337
effective HSP length: 108
effective length of query: 832
effective length of database: 8,214,913
effective search space: 6834807616
effective search space used: 6834807616
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)