Query 002298
Match_columns 940
No_of_seqs 379 out of 1338
Neff 6.5
Searched_HMMs 46136
Date Thu Mar 28 20:56:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002298.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002298hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0443 Actin regulatory prote 100.0 9E-209 2E-213 1777.2 70.0 774 1-940 44-827 (827)
2 KOG0444 Cytoskeletal regulator 100.0 2E-101 4E-106 862.0 17.7 658 2-682 527-1253(1255)
3 KOG0445 Actin regulatory prote 100.0 5.2E-97 1E-101 828.7 29.2 614 95-940 223-919 (919)
4 KOG0443 Actin regulatory prote 100.0 1E-62 2.3E-67 568.4 24.3 326 348-689 18-363 (827)
5 KOG0444 Cytoskeletal regulator 100.0 1.3E-45 2.7E-50 414.3 16.2 320 349-682 501-838 (1255)
6 KOG0445 Actin regulatory prote 100.0 1.1E-33 2.3E-38 319.4 16.9 302 1-343 547-878 (919)
7 smart00262 GEL Gelsolin homolo 99.7 2E-16 4.4E-21 144.3 10.9 88 98-190 2-89 (90)
8 PF02209 VHP: Villin headpiece 99.7 2E-17 4.4E-22 123.3 3.4 36 905-940 1-36 (36)
9 smart00153 VHP Villin headpiec 99.7 3.4E-17 7.3E-22 122.5 3.8 36 905-940 1-36 (36)
10 smart00262 GEL Gelsolin homolo 99.7 3.5E-16 7.6E-21 142.7 11.3 87 214-301 3-90 (90)
11 KOG1044 Actin-binding LIM Zn-f 99.5 1.2E-14 2.7E-19 164.5 3.4 63 878-940 605-670 (670)
12 PF00626 Gelsolin: Gelsolin re 99.4 8.8E-13 1.9E-17 116.1 6.2 69 226-295 8-76 (76)
13 PF00626 Gelsolin: Gelsolin re 99.3 1.9E-12 4.1E-17 114.0 7.0 74 107-185 3-76 (76)
14 COG5028 Vesicle coat complex C 96.4 0.01 2.2E-07 71.5 8.7 117 578-697 708-857 (861)
15 KOG1984 Vesicle coat complex C 95.9 0.036 7.7E-07 67.7 10.2 111 578-695 857-998 (1007)
16 PTZ00395 Sec24-related protein 95.6 0.044 9.5E-07 70.0 9.7 116 578-697 1403-1551(1560)
17 KOG1984 Vesicle coat complex C 92.9 0.3 6.5E-06 60.1 8.3 66 227-293 882-973 (1007)
18 KOG1985 Vesicle coat complex C 92.8 0.17 3.6E-06 62.0 6.0 114 578-697 734-883 (887)
19 PTZ00395 Sec24-related protein 92.5 0.29 6.2E-06 63.0 7.8 33 227-259 1435-1467(1560)
20 COG5028 Vesicle coat complex C 92.5 0.19 4.2E-06 61.0 5.9 67 226-292 736-828 (861)
21 KOG1985 Vesicle coat complex C 81.5 0.93 2E-05 55.8 2.5 29 228-256 765-793 (887)
22 PLN00162 transport protein sec 79.8 5.1 0.00011 50.7 8.4 45 577-625 618-662 (761)
23 PLN00162 transport protein sec 68.6 18 0.00039 45.9 9.2 82 209-294 619-717 (761)
24 PF00241 Cofilin_ADF: Cofilin/ 55.2 49 0.0011 31.8 7.6 55 370-424 47-104 (127)
25 KOG3655 Drebrins and related a 54.5 24 0.00053 41.5 6.1 61 386-446 73-135 (484)
26 smart00102 ADF Actin depolymer 42.1 90 0.002 30.1 7.2 54 371-424 48-104 (127)
27 KOG3655 Drebrins and related a 42.0 47 0.001 39.2 5.9 69 4-72 64-134 (484)
28 smart00102 ADF Actin depolymer 37.8 1.3E+02 0.0029 28.9 7.6 51 2-52 53-105 (127)
29 PF00241 Cofilin_ADF: Cofilin/ 36.6 1E+02 0.0023 29.5 6.7 60 3-65 54-115 (127)
30 cd00013 ADF Actin depolymerisa 35.3 1.8E+02 0.0039 28.0 8.1 55 371-425 54-111 (132)
31 cd00013 ADF Actin depolymerisa 34.4 1.4E+02 0.0031 28.6 7.3 60 2-64 59-120 (132)
32 PF11330 DUF3132: Protein of u 22.1 67 0.0015 29.4 2.2 36 608-643 88-123 (124)
33 PF05176 ATP-synt_10: ATP10 pr 21.0 1.8E+02 0.0038 32.1 5.7 104 34-149 136-244 (252)
No 1
>KOG0443 consensus Actin regulatory proteins (gelsolin/villin family) [Cytoskeleton]
Probab=100.00 E-value=9.1e-209 Score=1777.19 Aligned_cols=774 Identities=51% Similarity=0.886 Sum_probs=711.8
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+|||||||+|+.++++.+.|+||||||+++|+||+|+||++|||||+.|||++|||||||||||+.||+|||+||||++|
T Consensus 44 ~GdaYIvL~t~~~k~~~l~~DIHyWLGkd~S~dE~g~aAiktveLD~~Lgg~~vQhREVQg~ES~~FLsYFK~gi~~~~G 123 (827)
T KOG0443|consen 44 TGDAYIVLKTTLKKNGSLSYDIHYWLGKDSSQDEAGAAAIKTVELDDYLGGRAVQHREVQGHESEKFLSYFKPGIIYQEG 123 (827)
T ss_pred cCceEEEEehhhccCCccceeEEEEecCccchhhhcceeeeeEehhhhhCCCcceeehhcccchHHHHhhccCCceeccc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccccceEEEEEecceeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhcc
Q 002298 81 GVASGFRKTEEEEFETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKY 160 (940)
Q Consensus 81 g~~sgf~~~e~~~~~~rL~~vkGk~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~~ 160 (940)
|++|||+||+.+.+.+|||||||+|+||++|||++|+|||++||||||++++||||+|++||++||+||+++|+.|+|++
T Consensus 124 Gv~Sg~khv~~~~~~~rL~~~KGkr~vr~~eV~~~~sS~N~gDvFILD~g~~i~qw~G~~Ss~~ER~KAl~~~~~IrD~e 203 (827)
T KOG0443|consen 124 GVASGFKHVETEEYQVRLFHCKGKRNVRVKEVPFSWSSLNHGDVFILDTGSKIYQWNGPNSSIQERAKALEVVQYIRDNE 203 (827)
T ss_pred ccccCcccccccceeeEEEEEccceeEEEEEEEeehhhcCCCcEEEEEcCCceEEEcCCcccHHHHHHHHHHHHHhhccC
Confidence 99999999999999899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEecCCCCCCCCChhhHHHHhCCCCC-CCCCCCCccccccccCCCeEEEEeC--CeeEEEEc--c-ccccccC
Q 002298 161 HDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAP-IGKKVATEDDVIAETTPPKLYSIED--SQVKIVEG--E-LSKSMLE 234 (940)
Q Consensus 161 ~~G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~-~~~~~~~~~~~~~~~~~~rLy~v~~--G~l~~~e~--~-l~q~~L~ 234 (940)
|.|+|+|.+||+|+++.+++.++||..+||.++ ++.....+++.......++||+|++ |.+.+..+ . |+|+||+
T Consensus 204 ~~Gr~~V~vvdd~~~~~d~d~~~~~~~~~g~~~~~~~~~~~~~~~~~~s~~~kLYkVsd~~g~l~v~~va~~~l~qdlLd 283 (827)
T KOG0443|consen 204 RDGRCEVAVVDDGKEAADSDLGEFWGFVLGFAPALPKKSPDDDDEQANSAAAKLYKVSDASGGLKVPVVADGPLTKDLLD 283 (827)
T ss_pred CCCceeEEEecCcccccCchHHHHHHhhcCcCccCCCCCcchhhhhhhccccEEEEEeccCCCccccccccchhhHHhhc
Confidence 999999999999999999999999999999988 6665555555555678899999994 76655443 2 9999999
Q ss_pred CCceEEecCC-ceEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEecCCCCChhhHhcccCCCCCCCCCCCccc
Q 002298 235 NNKCYLLDRG-SEVFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYETYAFKSNFDSWPSGSTAPGAEEG 313 (940)
Q Consensus 235 s~~vyILD~g-~eIyVWiGk~as~~eRk~A~~~A~~yl~~~~Rp~~t~I~~V~eG~Ep~~FK~~F~~W~~~~~~~~~~~~ 313 (940)
+++||||||| .+||||+||.|+.+||++||..|++||++++||.+|+|++|.||+|++.||++|.+|++...+.+.+.+
T Consensus 284 ~~dCYILD~g~~~IfVW~Gr~as~~ERkaAm~~AeeFlk~k~yP~~TqV~rv~EG~Esa~FKq~F~~W~~~~~t~~~~~~ 363 (827)
T KOG0443|consen 284 TEDCYILDCGGGEIFVWKGRQASLDERKAAMSSAEEFLKKKKYPPNTQVVRVLEGAESAPFKQLFDSWPDKDQTNGKEEG 363 (827)
T ss_pred cCCeEEEecCCceEEEEeCCCCCHHHHHHHHHHHHHHHHhccCCCCceEEEecCCCcchhHHHHHhhCcccccccccccc
Confidence 9999999998 999999999999999999999999999999999999999999999999999999999999888788899
Q ss_pred hhhHHHHhhhccccccccCCCCCCCCCCCCcccCCccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcce
Q 002298 314 RGKVAALLKQQGVGIKGMGKSTPTNEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDY 393 (940)
Q Consensus 314 rgkva~~~~~~~~dv~~l~~~~p~~~e~~~~~d~sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~ 393 (940)
||++|++++++++||..|++..+++++.+|+|||+|+++||||++.++++||..++|+||+||||||+|+|..++++.+|
T Consensus 364 rG~va~l~q~~~~Dv~~L~~~~~~aa~~~mvddg~G~~~Vwrv~~~~~~~v~~~~~g~fy~GdcYlvlYtY~~~~~~~~~ 443 (827)
T KOG0443|consen 364 RGKVAALLQVKGFDVTGLHKSPKMAAQPQMVDDGSGKLQVWRVEGDEKQPVDIADYGKFYGGDCYLVLYTYPRGEERTEH 443 (827)
T ss_pred ccccceeeeecccchhhcccCccccccccceecCCCcEEEEEEcCceeeecChHHhCcccCCCeEEEEEeeccCCcccce
Confidence 99999999888999999988878899999999999999999999999999999999999999999999999535568999
Q ss_pred EEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEEEeecCCCCHHHHhhcCC-eEEEeCccccCCccccccCCCCCccc
Q 002298 394 FLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQP-MVVVKGGLCSGYKKSLADKGLTDETY 472 (940)
Q Consensus 394 ~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~Rv~QGkEp~~Fl~iF~~-~ii~~GG~ss~~~~~~~e~~~~~~~~ 472 (940)
+||.|+|++|+++|+++|+.+|++|++.++|.|+|+||+|||||+|||+||++ |||++||++. .+++|
T Consensus 444 iiY~W~G~qAs~ee~~~a~~~A~~l~~s~kg~~vq~rv~~GkEP~hF~~iFqgkliifkgg~s~-----------~g~~~ 512 (827)
T KOG0443|consen 444 IIYVWQGKQASQEERAAAISLAKALVESLKGVPVQVRIYEGKEPPHFLAIFQGKLIIFKGGTSE-----------EGNTY 512 (827)
T ss_pred EEEEEecccCCHHHHHHHHHHHHHHhhhcCCceeEEEeecCCCChHHHHhhCCceEEEecCcCC-----------CCCcc
Confidence 99999999999999999999999999999999999999999999999999998 9999999973 23567
Q ss_pred cCCceeEEEEEecCCCCceEEEeccCcCCCCCCCcEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCCceEEecccCC
Q 002298 473 TADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPGVAIKHAKEGT 552 (940)
Q Consensus 473 ~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~~~~~~~v~EG~ 552 (940)
+..+++||||+|++++|++||||++.++||||+|||||++++++|+|||++||++||+||+.++..|+ ..+...+.||+
T Consensus 513 ~~~~t~LFqV~Gt~~~n~kAveV~~~A~SLNSsd~fvL~t~s~~ylW~G~gss~~e~e~A~~v~~~l~-~~~~~~v~EG~ 591 (827)
T KOG0443|consen 513 PAPSTRLFQVQGTGPSNTKAVEVPAVASSLNSSDCFVLKTGSSVYLWCGKGSSGDEREMAKRVLDLLK-RCQSTAVKEGS 591 (827)
T ss_pred CCCceEEEEEeccCcccceeEeeccccccccccceEEEecCCeEEEEeCCCCCHHHHHHHHHHHHHHh-cCChhhhhcCC
Confidence 78889999999999999999999999999999999999999999999999999999999999999997 35677899999
Q ss_pred cccccccccCCcccCCCCCC-CCCCCCCCeeEEEEecCCeeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHH
Q 002298 553 ESSAFWFPLGGKQSYTSKKV-SPEIVRDPHLFTFSFNKGKFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKE 631 (940)
Q Consensus 553 E~~~FW~~LGGk~~y~~~~~-~~~~~~~prLF~~S~~~G~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~e 631 (940)
||++||++|||+.+|+++++ .....++||||.||+.+|.|+++||++|+||||++|||||||||++||||||++++++|
T Consensus 592 Ep~~FWe~LGGk~~Y~~sk~~~~~~~~~PrLF~Cs~~~g~f~~~EI~~F~QdDL~tdDi~lLDt~~evfvWvG~~a~~~e 671 (827)
T KOG0443|consen 592 EPDEFWELLGGKAEYPSSKRLEEKPERDPRLFSCSNKTGSFVVEEIYNFTQDDLMTDDIMLLDTWSEVFVWVGQEANEKE 671 (827)
T ss_pred CchhhHHHcCCCCCCCcCccccccCCCCCcEEEEEecCCcEEEEEecCcchhhccccceEEEecCceEEEEecCCCChhH
Confidence 99999999999999999985 34456999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCcEEEecCCCCCcccccccc-cCCCCccccCccHHHHHHHHhcCCCccccccccCC
Q 002298 632 KQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQKKVALLFGASHAAEDKSHANQ 710 (940)
Q Consensus 632 k~~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 710 (940)
|..|+.+|++||+++ +.+||++.|||++|+||+||++||+||. ||+.| +||++++++|++..
T Consensus 672 K~~Al~~~~~yl~~~-~p~gr~~~TPI~vV~qG~EPp~Ftg~F~~WD~~k-----wS~~~~~~~l~~~~----------- 734 (827)
T KOG0443|consen 672 KEEALTIGQKYLETD-LPEGRDPRTPIYVVKQGHEPPFFTGFFLSWDPSK-----WSFQKKLKDLKNKV----------- 734 (827)
T ss_pred HHHHHHHHHHHHhcc-CcccCCCCCceEEecCCCCCChhhccccccCCcc-----cccchHHHHHhccc-----------
Confidence 999999999999999 5569999999999999999999999999 99998 47899999998661
Q ss_pred CCCccchhhHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCcchhHHHhhhcccCCCCCCCCCCCCCCCCCCchHHHHH
Q 002298 711 GGPTQRASALAALSSAFNPSSERSTSPSHDRSNGSNQGGPTQRASALAALSSAFKSSPGTKASAPKTSGSGQGSQRAAAV 790 (940)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (940)
.+++.+++++++.+++.-.+ - +
T Consensus 735 ----------------------------------------~~~~~~~~~~~a~~~sk~~~----~---~----------- 756 (827)
T KOG0443|consen 735 ----------------------------------------TYNARAISEISADVRSKLYP----D---S----------- 756 (827)
T ss_pred ----------------------------------------ccchhhccchhhhhhccccc----c---c-----------
Confidence 23444555555655552100 0 0
Q ss_pred HHHhhhhhccccCCCCCCCCCCCCCCCCcccCCCCccccccccccccccccCCcccccccccccCCCCCCCccccccccc
Q 002298 791 AALSQVLSAEKKRSPDTSPTRTSGSPTAETSLSSEPKAEYAHSESEASEQVGDVKETEEVVPVSESNGDDSETKQVTEQD 870 (940)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (940)
.. +..
T Consensus 757 ----------------~~-----------------------------------------------------------~~~ 761 (827)
T KOG0443|consen 757 ----------------LN-----------------------------------------------------------PDS 761 (827)
T ss_pred ----------------CC-----------------------------------------------------------CCc
Confidence 00 000
Q ss_pred cCCCCCCCcccChHHHhhccCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 871 ENGSETSRSTFSYDQLKARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 871 ~~~~~~~~~~~~~~~l~~~~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
+....+|||++|+.++.++.++|||+|||.|||++||+.+|||+++|||+||+|||++|||+++||
T Consensus 762 ----~~p~~~~~~e~l~~~~~~~~~~id~~rrE~yLs~~dF~~~Fgmtk~eF~~LPkWKq~~lKk~~~LF 827 (827)
T KOG0443|consen 762 ----EAPRPAFPYEQLLTQSEDPVPDIDPTRREAYLSEEEFVSVFGMTKEEFYALPKWKQNKLKKQFGLF 827 (827)
T ss_pred ----cCcccCCCHHHHhccccCcCCCCChhHhhhhccHHHHHHHhCcCHHHHhhcchhHHHHHhhhhccC
Confidence 011147999999976666655699999999999999999999999999999999999999999999
No 2
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.9e-101 Score=861.98 Aligned_cols=658 Identities=26% Similarity=0.483 Sum_probs=550.9
Q ss_pred CcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecCc
Q 002298 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEGG 81 (940)
Q Consensus 2 GD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~Gg 81 (940)
+||||||.|+...+|.++|.||||||.++|.|...++|++||.|.++||..|..+||.||.||+.||++|...|+|++||
T Consensus 527 aDcYiVLKT~~ddsG~L~weIfyWiG~eAtLDK~aCsAiHAVnLRN~LgA~CRTvREEmgDEsEeFL~lF~~ei~YIEGG 606 (1255)
T KOG0444|consen 527 ADCYIVLKTTRDDSGQLRWEIFYWIGEEATLDKGACSAIHAVNLRNHLGATCRTVREEMGDESEEFLTLFGEEIVYIEGG 606 (1255)
T ss_pred ccEEEEEEeecccccccceeEEEEecccccccchhhhHHHhhhhhhhhCchhhhhHHhhCccHHHHHHHhcceeEEEecC
Confidence 79999999998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -ccCCCccccccccceEEEEEecc-eeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhc
Q 002298 82 -VASGFRKTEEEEFETRLYVCKGK-RVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEK 159 (940)
Q Consensus 82 -~~sgf~~~e~~~~~~rL~~vkGk-~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~ 159 (940)
.+|||..+|...+.+|||+|.++ ..|.+..||++..||....||+||.|.+||+|.|-.|...--.||+.+|.+|..+
T Consensus 607 rTasGFYT~E~~~h~TRlYrv~~~g~~i~lEPVpl~~tSLDPRf~FlLD~G~~IyiW~G~~s~~t~~~KARLfAEkinK~ 686 (1255)
T KOG0444|consen 607 RTASGFYTTEKPAHLTRLYRVGVNGTAIELEPVPLSVTSLDPRFCFLLDAGETIYIWSGYKSRITVSNKARLFAEKINKR 686 (1255)
T ss_pred ceecceeeecchHHhhhhheeccccceeEeeccCccccccCcceEEEEeCCceEEEEeccchhcccchHHHHHHHHhhhh
Confidence 79999999998999999999887 6799999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEecCCCCCCCCChhhHHHHhCCCCCCCCCCCCcccc-ccccCCCeEEEEe--CCeeEEEEc---c---ccc
Q 002298 160 YHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDDV-IAETTPPKLYSIE--DSQVKIVEG---E---LSK 230 (940)
Q Consensus 160 ~~~G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~~-~~~~~~~rLy~v~--~G~l~~~e~---~---l~q 230 (940)
+|.|+|+|..+-+|. ++.|||++|||.+.-+..+..+..+ .+....+|||+|. -|.+++-.+ + +.|
T Consensus 687 eRKgK~EI~l~rQg~-----e~pEFWqaLgg~p~e~~~~ikeHVPEdf~p~qpkLYkV~lGmGyLELPQvel~P~~~l~q 761 (1255)
T KOG0444|consen 687 ERKGKSEIELCRQGR-----EPPEFWQALGGNPDEPQGAIKEHVPEDFVPEQPKLYKVNLGMGYLELPQVELLPKGILKQ 761 (1255)
T ss_pred hccCceeeehhhhcC-----CCHHHHHHhCCCCcccccchhhcCCcccCCCCcceEEEccccceeecchhhhchhhHHHH
Confidence 999999999999984 8899999999976554433222211 1235679999998 577765332 2 899
Q ss_pred cccCCCceEEecCCceEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEecCCCCChhhHhcccCCCCCCCCC--
Q 002298 231 SMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYETYAFKSNFDSWPSGSTAP-- 308 (940)
Q Consensus 231 ~~L~s~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~yl~~~~Rp~~t~I~~V~eG~Ep~~FK~~F~~W~~~~~~~-- 308 (940)
++|++..||||||++.||||+||+++.-.|.+|.++.+++..+..||+.+.|.++.||.|..+|+.+|.+|++.....
T Consensus 762 ~lL~sk~VyiLDc~sDiF~W~GkKs~RLvraAa~KL~~EL~~M~dRPdyA~V~R~~EG~E~q~FrsKFagWDev~~VDyT 841 (1255)
T KOG0444|consen 762 DLLGSKGVYILDCNSDIFLWIGKKSNRLVRAAAQKLVVELHQMIDRPDYAQVYRETEGEESQMFRSKFAGWDEVVPVDYT 841 (1255)
T ss_pred HhhcCCeEEEEecCCceEEEecccchHHHHHHHHHHHHHHHhhhcCcchhheeeccCccHHHHHHHhhCCcceeeeeecc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876321
Q ss_pred CCccch----hhHHHHh---hhccccccccCCC----CCCCCCCCCcccCCcc---EEEEEEeCCceeeCCCCccceeee
Q 002298 309 GAEEGR----GKVAALL---KQQGVGIKGMGKS----TPTNEEVPPLLEGGGK---MEVWRINGSAKTSLPKEDIGKFYS 374 (940)
Q Consensus 309 ~~~~~r----gkva~~~---~~~~~dv~~l~~~----~p~~~e~~~~~d~sg~---l~VWrIe~~~~~~v~~~~~G~Fys 374 (940)
...+.. |++.... .+-..|+..|+-. +|.++..+.+.+++.. ++-|.+||.+.+.+|++++|+||+
T Consensus 842 Rta~sV~~~pg~~k~~~~k~~~mraDLaALFlpRQp~MslaEaEqLmEewNyDLe~ME~FVLEgKKFvrLPeeEfG~FYT 921 (1255)
T KOG0444|consen 842 RTADSVQRVPGDLKVIVKKDNMMRADLAALFLPRQPSMSLAEAEQLMEEWNYDLELMESFVLEGKKFVRLPEEEFGIFYT 921 (1255)
T ss_pred cchHHHhhCcchhhHHHhhhhhhHHHHHHHhcCCCCCCChHHHHHHHHHhcccHHHHHHHhhcCchhccCCHHHhCeeec
Confidence 111111 2211111 1123455555432 2334444556666654 567999999999999999999999
Q ss_pred CcEEEEEEeee-c----CCC----------------------CcceEEEEEcCCCCChHhH-HHHHHHHHHHHhhcCCCC
Q 002298 375 GDCYIVLYTYH-S----GDR----------------------KEDYFLCCWFGKDSIEEDQ-KMATRLANTMCNSLKGRP 426 (940)
Q Consensus 375 gDcYIVlytY~-~----~~~----------------------~~~~~iy~W~G~~ss~de~-~~aa~la~~l~~~l~g~~ 426 (940)
+||||+|+.|. + .+| ..+|++||||||+++...+ +....+..+....++++.
T Consensus 922 ~dCYVFLCRY~vp~EE~Eeg~ed~~n~~advsks~e~~qPE~dfqCvVYFWQGR~AsNMGWLtFTF~LQkkFe~~F~~kL 1001 (1255)
T KOG0444|consen 922 MDCYVFLCRYAVPPEEDEEGEEDHANPAADVSKSDEDDQPEMDFQCVVYFWQGRDASNMGWLTFTFQLQKKFEEIFKDKL 1001 (1255)
T ss_pred cceEEEEEeeecCCCCccccccccCCccccccccccccCCccceeEEEEEecCCccCccceEEEEEEehhhHHHhcccce
Confidence 99999999997 1 111 1279999999999998777 445667788888899999
Q ss_pred eEEEeecCCCCHHHHhhcCC-eEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCC-CceEEEeccCcCCCCC
Q 002298 427 VQGRIFQGREPPQFVALFQP-MVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIH-NNKTEQVDAVATSLNS 504 (940)
Q Consensus 427 vq~Rv~QGkEp~~Fl~iF~~-~ii~~GG~ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~-~~~aveV~~~asSLnS 504 (940)
..||++|..|.+.||+.|+. +||++|.... -+ .. -...+.|||+|.++.. ++|+|||.+.++.|||
T Consensus 1002 EVVRm~QQQEN~KFlSHFKRKFiIhrGkRk~-~~----~~-------G~~~pelfq~R~NGsalctR~IQin~da~~LnS 1069 (1255)
T KOG0444|consen 1002 EVVRMYQQQENHKFLSHFKRKFIIHRGKRKL-TK----NL-------GGKWPELFQMRANGSALCTRTIQINCDANQLNS 1069 (1255)
T ss_pred eeeeHhhhhhhhHHHHHhhhhheeeccccch-hh----hh-------cCCCchheeeecCCccceeeeEEecCcHHHHhh
Confidence 99999999999999999995 6777775431 01 01 1234689999988764 8999999999999999
Q ss_pred CCcEEeee-------CCeEEEEECCCCCHHHHHHHHHHHHHhCC-CceEEecccCCcccccccccCCcccCCCCCCCCCC
Q 002298 505 SECFLLQS-------GSTMFTWHGNQSTFEQQQLAAKVAEFLKP-GVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEI 576 (940)
Q Consensus 505 ~d~FIL~~-------~~~vyvW~G~~ss~~er~~A~~va~~l~~-~~~~~~v~EG~E~~~FW~~LGGk~~y~~~~~~~~~ 576 (940)
..||||+. ++.+|+|.|+.|+++|++.|..+...... ...++.+.||+|+.+||..+||+++|.... ..
T Consensus 1070 ~FC~iL~vPFe~~~~~gvvy~w~gk~sdp~e~~~a~d~~~~~~d~~~~~~~~~egee~e~fw~~~g~~k~ye~d~---~~ 1146 (1255)
T KOG0444|consen 1070 AFCHMLRIPFEEDGHRGVVYVWMGKDSDPREHEFASDLVVRDDDNDFRIVEVQEGEENEEFWKVLGGKKKYETDS---SF 1146 (1255)
T ss_pred hhHheEecccccCCCceEEEEEeccCCChHHHHHHHHhcCccccchhhhhccCCccchHHHhcccCCCCccchhH---HH
Confidence 99999975 36889999999999999999665443322 134677899999999999999999886542 12
Q ss_pred CCCCeeEEEEecCCeeeEEee-cccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHHHhhccccCCCCC
Q 002298 577 VRDPHLFTFSFNKGKFEVEEV-YNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPK 655 (940)
Q Consensus 577 ~~~prLF~~S~~~G~~~v~EI-~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~r~~~ 655 (940)
..-.|||+|++.+|+|.++|- .+||||||..+|+||||.+..+|+|||...+..+-+.++..+|.|..+.+. +...
T Consensus 1147 ~khtrlfrc~nekgyfa~sek~~DfcqDDl~dddim~ldng~~v~~w~g~~~s~ie~Kls~~a~Qvy~~~mr~---k~~e 1223 (1255)
T KOG0444|consen 1147 VKHTRLFRCTNEKGYFAISEKTVDFCQDDLDDDDIMILDNGDAVFLWIGARSSDIEAKLSYQAAQVYHASMRM---KANE 1223 (1255)
T ss_pred HHHHHHHhccchhhhhhHhHhhhhhhhccchhhhhhhhcccceeeeeecceehhHHHHHHHHHHHHHHHhccc---cccc
Confidence 345689999999999999987 499999999999999999999999999999999999999999999988654 2333
Q ss_pred Cc--EEEecCCCCCcccccccc-cCCCCcc
Q 002298 656 VP--LYKVTEGNEPCFCTTFFS-WDPTKAT 682 (940)
Q Consensus 656 ~p--I~~V~qG~EP~~Ft~~F~-Wd~~k~~ 682 (940)
.| ...+..|.|.+.|++||+ |...+-.
T Consensus 1224 ~pr~~~l~~~gre~~~F~~cfhaws~~~~~ 1253 (1255)
T KOG0444|consen 1224 KPRKFMLAVRGRESCRFRKCFHAWSKMKEP 1253 (1255)
T ss_pred chHHHHHHHhcchhhhhHHHHHHHHHhhcc
Confidence 44 457889999999999999 9876543
No 3
>KOG0445 consensus Actin regulatory protein supervillin (gelsolin/villin family) [Cytoskeleton]
Probab=100.00 E-value=5.2e-97 Score=828.68 Aligned_cols=614 Identities=27% Similarity=0.463 Sum_probs=494.1
Q ss_pred ceEEEEEecceeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhccCCC-Cc-eEEEecC
Q 002298 95 ETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDG-NC-NVAIVDD 172 (940)
Q Consensus 95 ~~rL~~vkGk~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~~~~G-~~-~i~iVde 172 (940)
..+|+||||++||.++.|++..+|||++|||||..++.+|.|.|..||+.|++||.+++..|..+...| ++ .|.+|.+
T Consensus 223 ~vMLlqVkGr~hVqtRLVeP~~ssln~gdCF~lv~~~~lf~yvG~faNviEk~kas~lc~~I~~k~dLgCtAt~ivtit~ 302 (919)
T KOG0445|consen 223 RVMLLQVKGRRHVQTRLVEPRASSLNSGDCFLLVSPHCLFLYVGEFANVIEKAKASELCTLIQTKRDLGCTATYIVTITE 302 (919)
T ss_pred ceEEEEEcccccceeEEechhhcccccCceEEEechhHHhhhhhHHHHHHHHhHHHHHHHHHhhcccCCceeEEEEEEec
Confidence 579999999999999999999999999999999999999999999999999999999999998764433 22 3666765
Q ss_pred CCCCCCCChhhHHHHhCCCCCCCCCCCCccccccccC---CCeEEEEeCCeeEEEEcc---ccccccCCCceEEecCCce
Q 002298 173 GKLDTESDSGEFWVLFGGFAPIGKKVATEDDVIAETT---PPKLYSIEDSQVKIVEGE---LSKSMLENNKCYLLDRGSE 246 (940)
Q Consensus 173 G~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~~~~~~~---~~rLy~v~~G~l~~~e~~---l~q~~L~s~~vyILD~g~e 246 (940)
..........||++|||...+.......+++.++.. ...+|++.+.++.+.+-. ++-++|++..|+|+|+|+|
T Consensus 303 -~~~~t~~~~~Fw~llg~qs~~~~~g~a~ede~fE~~iietN~iyr~~dd~l~p~~~~w~ipk~~~l~p~eVLvFDFGSE 381 (919)
T KOG0445|consen 303 -INTHTHAAKDFWKLLGGQSSYQSAGDAKEDELFEAAIIETNCIYRLMDDKLVPDDDYWKIPKCSLLQPKEVLVFDFGSE 381 (919)
T ss_pred -cchhHHHHHHHHHHhCCccchhhcCCccccchHHHHHHHhhhHHhhcccccCccccccccccccccCcceEEEEecCce
Confidence 322223357899999988777655444444445433 345678877777766532 8889999999999999999
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHh-----------------cCCCCCceEEEecCCCCChhhHhcccCCCCCCCCCC
Q 002298 247 VFVWVGRVTQVEERKAASQAAEEFISS-----------------QNRPKSIRITRVIQGYETYAFKSNFDSWPSGSTAPG 309 (940)
Q Consensus 247 IyVWiGk~as~~eRk~A~~~A~~yl~~-----------------~~Rp~~t~I~~V~eG~Ep~~FK~~F~~W~~~~~~~~ 309 (940)
||||.||.++...|+.|+++|+++++. .+||.|+..-+|+||.|+.+||++|.||++......
T Consensus 382 vYVW~Gk~~~~~~~~~A~~lAk~l~~~dy~nc~~npld~~~~~~~gRPeW~i~gkitq~~et~LFKeKFsDWpE~~r~~~ 461 (919)
T KOG0445|consen 382 VYVWHGKEVTLAQRKIAFQLAKHLWNFDYENCDINPLDLIPRKGQGRPEWAIFGKITQHNETILFKEKFSDWPELKRSNE 461 (919)
T ss_pred EEEEcCccCchHHHHHHHHHHHHHhCCCcccCccccccccccccCCCcceeeechhhcchhhhhHHHhhccchHhhhhhc
Confidence 999999999999999999999998763 589999999999999999999999999998764332
Q ss_pred CccchhhHHHHhhhccc-----cccccCCCCCCC--------------------CCCCCcccCCccEEEEEEeCCceeeC
Q 002298 310 AEEGRGKVAALLKQQGV-----GIKGMGKSTPTN--------------------EEVPPLLEGGGKMEVWRINGSAKTSL 364 (940)
Q Consensus 310 ~~~~rgkva~~~~~~~~-----dv~~l~~~~p~~--------------------~e~~~~~d~sg~l~VWrIe~~~~~~v 364 (940)
.+.|+ .+...+.-.. |+..|.+ .|.. .+.+.+|..+.++.+|.|-++....+
T Consensus 462 ~~k~~--~~~~k~np~~~v~a~~~t~~~~-ep~~~~~~iL~~~nlgrg~~l~d~~drr~fdVis~s~d~W~i~ef~~~~~ 538 (919)
T KOG0445|consen 462 KNKGE--LAQHKENPRTDVKAYDVTRMVS-EPQTTAGTILDGVNLGRGYGLVDGHDRRQFDVISVSVDVWHILEFDYSRL 538 (919)
T ss_pred cCchh--hhhhhcCCceeeeehhheeccc-chhhhHHHHhhhhccCCceeeeecccceeeeeeeecccceeeehhhhhhh
Confidence 23222 1111111111 2222211 2210 11122344567889999999999999
Q ss_pred CCCccceeeeCcEEEEEEeee---------------cCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEE
Q 002298 365 PKEDIGKFYSGDCYIVLYTYH---------------SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQG 429 (940)
Q Consensus 365 ~~~~~G~FysgDcYIVlytY~---------------~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~ 429 (940)
| +.+||||++|||||.|.|. ...||++|++|||||+|++..|+|+||+++++||+ .+..|+
T Consensus 539 ~-~~~ghF~s~~~YvvrWky~Is~~Vr~~~~g~~~~r~~Gr~rcvyf~WqG~hst~~ekG~~AL~tvElD~---e~gaqv 614 (919)
T KOG0445|consen 539 P-QSIGHFHSGDAYVVRWKYMISTAVRSRQKGEHSVRAAGRERCVYFFWQGRHSTVSEKGTSALMTVELDE---ERGAQV 614 (919)
T ss_pred h-hhhhccccCceEEEEEEEEeehhhhhhhcCccchhhcccceEEEEEEccccCCcccccceeeeeeeecc---ccCcee
Confidence 8 8999999999999999996 13578899999999999999999999999999987 567899
Q ss_pred EeecCCCCHHHHhhcCC-eEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCCcE
Q 002298 430 RIFQGREPPQFVALFQP-MVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECF 508 (940)
Q Consensus 430 Rv~QGkEp~~Fl~iF~~-~ii~~GG~ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d~F 508 (940)
||.||+||++||++|+| |+++.|-.. ...-|||+|+|..+..+-..||.+..|+|+|.-.+
T Consensus 615 rv~qG~Ep~~Fl~lF~g~m~vhsgr~E------------------~~~erlY~v~G~vs~Et~l~Ev~c~~S~LRSr~sm 676 (919)
T KOG0445|consen 615 RVLQGKEPPCFLQLFQGGMVVHSGRRE------------------EEEERLYCVRGEVSVETNLLEVACHCSSLRSRTSM 676 (919)
T ss_pred EeecCCCccHHHHHhcCCeeEEcCchh------------------hchhheeeEecccccchhhhHhhhccccccccceE
Confidence 99999999999999995 666665321 11247999999999999999999999999999999
Q ss_pred EeeeC--CeEEEEECCCCCHHHHHHHHHHHHHhC---C----CceEEecccCCcccccccccCCcccCCCCCCCCCCCCC
Q 002298 509 LLQSG--STMFTWHGNQSTFEQQQLAAKVAEFLK---P----GVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEIVRD 579 (940)
Q Consensus 509 IL~~~--~~vyvW~G~~ss~~er~~A~~va~~l~---~----~~~~~~v~EG~E~~~FW~~LGGk~~y~~~~~~~~~~~~ 579 (940)
|+..+ ..+|+|||..+-.+.|+.+..+|..|. + +.++.+|+||++|..||++||-+. .++.
T Consensus 677 v~~~~~~~~~~~whg~k~~~ht~~v~v~aa~~~~~q~pgs~~~~~~~Eveegs~~~~~~~alGrkd----------f~~~ 746 (919)
T KOG0445|consen 677 VVLNVNKALIYLWHGCKAQAHTKEVGVTAANKIKEQCPGSSSKVTIHEVEEGSEPLGFWDALGRKD----------FNFA 746 (919)
T ss_pred EEEeccccceEEEecccCCcchhhHhHHHHHHHHHhCCCccccceeEeecCCCCchhhhhhccccc----------cccc
Confidence 99875 589999999999999999988887764 2 357889999999999999999864 5688
Q ss_pred CeeEEEEecCCeeeEEee-------cccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHHHhhccccCC
Q 002298 580 PHLFTFSFNKGKFEVEEV-------YNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGL 652 (940)
Q Consensus 580 prLF~~S~~~G~~~v~EI-------~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~r 652 (940)
||||-+|..+ ++|+ ++|+|+||.+ +||||.|++||+|. ...+|+.||++|.+|+++.
T Consensus 747 ~RlF~~sS~q----a~els~p~rc~~pFsQ~~Ly~--afLvD~gdelwLW~----w~s~r~~Aleta~~Ywk~~------ 810 (919)
T KOG0445|consen 747 PRLFILSSSQ----ATELSYPARCPMPFSQEDLYS--AFLVDNGDELWLWQ----WASDRKSALETALQYWKNL------ 810 (919)
T ss_pred ceeeeccchh----hhhccCcccCCCcccHHHHhh--heeeccCCeeEeeh----hhhHHHHHHHHHHHHHhcc------
Confidence 9999988755 4443 6899999999 59999999999998 4567999999999999842
Q ss_pred CCCCcEEEecCCCCCcccccccc-cCCCCccccCccHHHHHHHHhcCCCccccccccCCCCCccchhhHhhhccCCCCCC
Q 002298 653 SPKVPLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQKKVALLFGASHAAEDKSHANQGGPTQRASALAALSSAFNPSS 731 (940)
Q Consensus 653 ~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (940)
..|-++|..|.||..||+.|+ |....... +.
T Consensus 811 --~~p~~vV~aGlEPl~Fk~lFp~We~red~D-------------~~--------------------------------- 842 (919)
T KOG0445|consen 811 --KAPSYVVHAGLEPLTFKNLFPSWEHREDID-------------TE--------------------------------- 842 (919)
T ss_pred --CCCceEEEcCcChhhhhhhCCCceeccccC-------------CC---------------------------------
Confidence 257899999999999999999 99875541 11
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcchhHHHhhhcccCCCCCCCCCCCCCCCCCCchHHHHHHHHhhhhhccccCCCCCCCCC
Q 002298 732 ERSTSPSHDRSNGSNQGGPTQRASALAALSSAFKSSPGTKASAPKTSGSGQGSQRAAAVAALSQVLSAEKKRSPDTSPTR 811 (940)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (940)
+ ...+.+
T Consensus 843 ------------------~-s~~i~~------------------------------------------------------ 849 (919)
T KOG0445|consen 843 ------------------V-SNQITL------------------------------------------------------ 849 (919)
T ss_pred ------------------c-CCchhH------------------------------------------------------
Confidence 0 000000
Q ss_pred CCCCCCCcccCCCCccccccccccccccccCCcccccccccccCCCCCCCccccccccccCCCCCCCcccChHHHhhccC
Q 002298 812 TSGSPTAETSLSSEPKAEYAHSESEASEQVGDVKETEEVVPVSESNGDDSETKQVTEQDENGSETSRSTFSYDQLKARSD 891 (940)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 891 (940)
.+|+ ... -..++||++.|.. .
T Consensus 850 ------------------------------------------------v~d~--La~-------~c~T~yple~l~a--r 870 (919)
T KOG0445|consen 850 ------------------------------------------------VEDV--LAK-------LCKTIYPLEDLLA--R 870 (919)
T ss_pred ------------------------------------------------HHHH--HHH-------HhhhcChHHHHhc--C
Confidence 0000 000 1235799999986 4
Q ss_pred CCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 892 NPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 892 ~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
.||+||||+|+|.||+||||+.+|+|+|+||+.||.|||++|||..|||
T Consensus 871 pLPeGvdp~rLE~YLtdeDF~~al~~~R~Ef~alp~WKQ~~lkK~~GLF 919 (919)
T KOG0445|consen 871 PLPEGVDPLRLEIYLTDEDFEFALDMTRDEFNALPAWKQVNLKKAKGLF 919 (919)
T ss_pred CCCCCCCchhheeeechHHHHHHhccCHHHhhcchhhhhhhhhhhccCC
Confidence 7999999999999999999999999999999999999999999999999
No 4
>KOG0443 consensus Actin regulatory proteins (gelsolin/villin family) [Cytoskeleton]
Probab=100.00 E-value=1e-62 Score=568.36 Aligned_cols=326 Identities=28% Similarity=0.521 Sum_probs=288.7
Q ss_pred CccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 348 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 348 sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
...++||||+++++++||++.||.||+|||||||+|.....+..+|.||||+|+++|+||+++||.++++||+.|||.||
T Consensus 18 ~pGl~IWRIe~f~lv~VP~s~~G~Fy~GdaYIvL~t~~~k~~~l~~DIHyWLGkd~S~dE~g~aAiktveLD~~Lgg~~v 97 (827)
T KOG0443|consen 18 KPGLEIWRIENFELVPVPKSSHGKFYTGDAYIVLKTTLKKNGSLSYDIHYWLGKDSSQDEAGAAAIKTVELDDYLGGRAV 97 (827)
T ss_pred CCceEEEEeccCeeeecchhccCceecCceEEEEehhhccCCccceeEEEEecCccchhhhcceeeeeEehhhhhCCCcc
Confidence 45799999999999999999999999999999999876566778999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCC
Q 002298 428 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSE 506 (940)
Q Consensus 428 q~Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d 506 (940)
|+|++||+|+..||++|+ ++++.+||+.|||+|+.. +.| .+|||||+| .+++|+.||++.++|||.+|
T Consensus 98 QhREVQg~ES~~FLsYFK~gi~~~~GGv~Sg~khv~~------~~~---~~rL~~~KG--kr~vr~~eV~~~~sS~N~gD 166 (827)
T KOG0443|consen 98 QHREVQGHESEKFLSYFKPGIIYQEGGVASGFKHVET------EEY---QVRLFHCKG--KRNVRVKEVPFSWSSLNHGD 166 (827)
T ss_pred eeehhcccchHHHHhhccCCceecccccccCcccccc------cce---eeEEEEEcc--ceeEEEEEEEeehhhcCCCc
Confidence 999999999999999999 688899999999999752 222 359999998 67999999999999999999
Q ss_pred cEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCC-----ceEEecccCC-----cccccccccCCccc-CCCCCCC--
Q 002298 507 CFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPG-----VAIKHAKEGT-----ESSAFWFPLGGKQS-YTSKKVS-- 573 (940)
Q Consensus 507 ~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~~-----~~~~~v~EG~-----E~~~FW~~LGGk~~-y~~~~~~-- 573 (940)
||||++++.||+|+|..|+..||.+|..+++.|+.. +.+.+++.|+ +..+||..+||.++ .+.....
T Consensus 167 vFILD~g~~i~qw~G~~Ss~~ER~KAl~~~~~IrD~e~~Gr~~V~vvdd~~~~~d~d~~~~~~~~~g~~~~~~~~~~~~~ 246 (827)
T KOG0443|consen 167 VFILDTGSKIYQWNGPNSSIQERAKALEVVQYIRDNERDGRCEVAVVDDGKEAADSDLGEFWGFVLGFAPALPKKSPDDD 246 (827)
T ss_pred EEEEEcCCceEEEcCCcccHHHHHHHHHHHHHhhccCCCCceeEEEecCcccccCchHHHHHHhhcCcCccCCCCCcchh
Confidence 999999999999999999999999999999999853 3455565443 34579999988876 3222111
Q ss_pred --CCCCCCCeeEEEEecCCeeeEEeec--ccCccCCCCCCEEEEeCC-CEEEEEEcCCCCHHHHHHHHHHHHHHHHhhcc
Q 002298 574 --PEIVRDPHLFTFSFNKGKFEVEEVY--NFSQDDLLTEDILILDTH-AEVFVWVGQSVDSKEKQSAFEFGQNYIDMATS 648 (940)
Q Consensus 574 --~~~~~~prLF~~S~~~G~~~v~EI~--~F~QdDL~~ddv~ILD~~-~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~ 648 (940)
+-....++||.|++++|.+.+.++. +|+|+.|+++|||||||+ .+||||+|+.|+.+||+.||..|++||+..
T Consensus 247 ~~~~~s~~~kLYkVsd~~g~l~v~~va~~~l~qdlLd~~dCYILD~g~~~IfVW~Gr~as~~ERkaAm~~AeeFlk~k-- 324 (827)
T KOG0443|consen 247 DEQANSAAAKLYKVSDASGGLKVPVVADGPLTKDLLDTEDCYILDCGGGEIFVWKGRQASLDERKAAMSSAEEFLKKK-- 324 (827)
T ss_pred hhhhhccccEEEEEeccCCCccccccccchhhHHhhccCCeEEEecCCceEEEEeCCCCCHHHHHHHHHHHHHHHHhc--
Confidence 1123678999999999999999985 499999999999999999 899999999999999999999999999985
Q ss_pred ccCCCCCCcEEEecCCCCCcccccccc-cCCCCccccCccHH
Q 002298 649 LEGLSPKVPLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQ 689 (940)
Q Consensus 649 ~~~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~ 689 (940)
++++.|.|.+|.+|.|+..|+++|. |.+.... +++.+-
T Consensus 325 --~yP~~TqV~rv~EG~Esa~FKq~F~~W~~~~~t-~~~~~~ 363 (827)
T KOG0443|consen 325 --KYPPNTQVVRVLEGAESAPFKQLFDSWPDKDQT-NGKEEG 363 (827)
T ss_pred --cCCCCceEEEecCCCcchhHHHHHhhCcccccc-cccccc
Confidence 7889999999999999999999998 9998777 465554
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.3e-45 Score=414.27 Aligned_cols=320 Identities=26% Similarity=0.475 Sum_probs=279.5
Q ss_pred ccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeE
Q 002298 349 GKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQ 428 (940)
Q Consensus 349 g~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq 428 (940)
..+.||.||+|-...+++-.||+||.+||||||.|.....|..+|.||||+|.+++.|.++.+|.+|+.|.+.|+..+..
T Consensus 501 pGltiWeIENF~P~~~eEafHGkFYeaDcYiVLKT~~ddsG~L~weIfyWiG~eAtLDK~aCsAiHAVnLRN~LgA~CRT 580 (1255)
T KOG0444|consen 501 PGLTIWEIENFYPSIMEEAFHGKFYEADCYIVLKTTRDDSGQLRWEIFYWIGEEATLDKGACSAIHAVNLRNHLGATCRT 580 (1255)
T ss_pred CCceEEeehhhhhHHHHHHhccceecccEEEEEEeecccccccceeEEEEecccccccchhhhHHHhhhhhhhhCchhhh
Confidence 36999999999999999999999999999999999876778899999999999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhhcCC-eEEEeCc-cccCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCC
Q 002298 429 GRIFQGREPPQFVALFQP-MVVVKGG-LCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSE 506 (940)
Q Consensus 429 ~Rv~QGkEp~~Fl~iF~~-~ii~~GG-~ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d 506 (940)
+|+-||.|+.+||++|+. ++++.|| +.+||... |. ...-+|||+|.+.+ .++..--|++..+||..++
T Consensus 581 vREEmgDEsEeFL~lF~~ei~YIEGGrTasGFYT~--E~-------~~h~TRlYrv~~~g-~~i~lEPVpl~~tSLDPRf 650 (1255)
T KOG0444|consen 581 VREEMGDESEEFLTLFGEEIVYIEGGRTASGFYTT--EK-------PAHLTRLYRVGVNG-TAIELEPVPLSVTSLDPRF 650 (1255)
T ss_pred hHHhhCccHHHHHHHhcceeEEEecCceecceeee--cc-------hHHhhhhheecccc-ceeEeeccCccccccCcce
Confidence 999999999999999995 8889999 88998742 11 12347999999853 2445555677789999999
Q ss_pred cEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCC-----CceEEecccCCcccccccccCCcccCCCCC---CCCC--C
Q 002298 507 CFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKP-----GVAIKHAKEGTESSAFWFPLGGKQSYTSKK---VSPE--I 576 (940)
Q Consensus 507 ~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~-----~~~~~~v~EG~E~~~FW~~LGGk~~y~~~~---~~~~--~ 576 (940)
||+|+.|.+||||.|-.|.-.--.+|+.+|+.|.. +.+|..+.+|+|+++||++|||...-+... +.++ .
T Consensus 651 ~FlLD~G~~IyiW~G~~s~~t~~~KARLfAEkinK~eRKgK~EI~l~rQg~e~pEFWqaLgg~p~e~~~~ikeHVPEdf~ 730 (1255)
T KOG0444|consen 651 CFLLDAGETIYIWSGYKSRITVSNKARLFAEKINKRERKGKSEIELCRQGREPPEFWQALGGNPDEPQGAIKEHVPEDFV 730 (1255)
T ss_pred EEEEeCCceEEEEeccchhcccchHHHHHHHHhhhhhccCceeeehhhhcCCCHHHHHHhCCCCcccccchhhcCCcccC
Confidence 99999999999999999988888888889988863 358899999999999999999987654432 2222 3
Q ss_pred CCCCeeEEEEecCCeeeEEeec-----ccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHHHhhccccC
Q 002298 577 VRDPHLFTFSFNKGKFEVEEVY-----NFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEG 651 (940)
Q Consensus 577 ~~~prLF~~S~~~G~~~v~EI~-----~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~ 651 (940)
+.+|+||.+....|++.+-.|. -.+|+.|.+..||||||++.||||+|+.++.-.|..|+++.++..++. .
T Consensus 731 p~qpkLYkV~lGmGyLELPQvel~P~~~l~q~lL~sk~VyiLDc~sDiF~W~GkKs~RLvraAa~KL~~EL~~M~----d 806 (1255)
T KOG0444|consen 731 PEQPKLYKVNLGMGYLELPQVELLPKGILKQDLLGSKGVYILDCNSDIFLWIGKKSNRLVRAAAQKLVVELHQMI----D 806 (1255)
T ss_pred CCCcceEEEccccceeecchhhhchhhHHHHHhhcCCeEEEEecCCceEEEecccchHHHHHHHHHHHHHHHhhh----c
Confidence 5789999999999999887772 589999999999999999999999999999999999999999998874 5
Q ss_pred CCCCCcEEEecCCCCCcccccccc-cCCCCcc
Q 002298 652 LSPKVPLYKVTEGNEPCFCTTFFS-WDPTKAT 682 (940)
Q Consensus 652 r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~~ 682 (940)
|+....|+.+.+|.|...|+..|. ||.....
T Consensus 807 RPdyA~V~R~~EG~E~q~FrsKFagWDev~~V 838 (1255)
T KOG0444|consen 807 RPDYAQVYRETEGEESQMFRSKFAGWDEVVPV 838 (1255)
T ss_pred CcchhheeeccCccHHHHHHHhhCCcceeeee
Confidence 677788999999999999999998 9997544
No 6
>KOG0445 consensus Actin regulatory protein supervillin (gelsolin/villin family) [Cytoskeleton]
Probab=100.00 E-value=1.1e-33 Score=319.38 Aligned_cols=302 Identities=25% Similarity=0.387 Sum_probs=235.9
Q ss_pred CCcEEEEeeeccC---------------CCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcH
Q 002298 1 MGDCYIVLQTTPG---------------KGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESD 65 (940)
Q Consensus 1 sGD~YIVL~t~~~---------------~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~ 65 (940)
+||||||-+.|+- ..|+.+...|||+|.++|..|+|+||++++|||..-| .|+|+.||+||+
T Consensus 547 s~~~YvvrWky~Is~~Vr~~~~g~~~~r~~Gr~rcvyf~WqG~hst~~ekG~~AL~tvElD~e~g---aqvrv~qG~Ep~ 623 (919)
T KOG0445|consen 547 SGDAYVVRWKYMISTAVRSRQKGEHSVRAAGRERCVYFFWQGRHSTVSEKGTSALMTVELDEERG---AQVRVLQGKEPP 623 (919)
T ss_pred cCceEEEEEEEEeehhhhhhhcCccchhhcccceEEEEEEccccCCcccccceeeeeeeeccccC---ceeEeecCCCcc
Confidence 6899999998762 3466788899999999999999999999999999766 699999999999
Q ss_pred HHHhccCCCEEEecCcccCCCccccccccceEEEEEeccee--EEEEEeccCccccCCCCeEEEecCC--eEEEEcCCCC
Q 002298 66 KFLSYFKPCIIPLEGGVASGFRKTEEEEFETRLYVCKGKRV--VRMKQVPFARSSLNHDDVFILDTKD--KIYQFNGANS 141 (940)
Q Consensus 66 ~Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~~~rL~~vkGk~~--v~~~EV~~s~sSLNsgDvFILd~~~--~IyvW~G~~S 141 (940)
+||++|.|+|+++.|-..- -.-|||+|+|... ..+.||.+..|+|.|.-.+|+..++ .||+|+|..+
T Consensus 624 ~Fl~lF~g~m~vhsgr~E~---------~~erlY~v~G~vs~Et~l~Ev~c~~S~LRSr~smv~~~~~~~~~~~whg~k~ 694 (919)
T KOG0445|consen 624 CFLQLFQGGMVVHSGRREE---------EEERLYCVRGEVSVETNLLEVACHCSSLRSRTSMVVLNVNKALIYLWHGCKA 694 (919)
T ss_pred HHHHHhcCCeeEEcCchhh---------chhheeeEecccccchhhhHhhhccccccccceEEEEeccccceEEEecccC
Confidence 9999999999998775432 2347999999854 4788999999999999999998764 6999999999
Q ss_pred CHHHHHHHHHHHHHhhhccCC--CCceEEEecCCCCCCCCChhhHHHHhCCCCCCCCCCCCccccccccCCCeEEEEeCC
Q 002298 142 NIQERAKALEVIQFLKEKYHD--GNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIEDS 219 (940)
Q Consensus 142 n~~Er~kA~~ia~~Ik~~~~~--G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~~~~~~~~~rLy~v~~G 219 (940)
-...|..+..+|+.|+.+..+ |++.++.||+| +++..||++||-+. ....+|||-.++-
T Consensus 695 ~~ht~~v~v~aa~~~~~q~pgs~~~~~~~Eveeg-----s~~~~~~~alGrkd--------------f~~~~RlF~~sS~ 755 (919)
T KOG0445|consen 695 QAHTKEVGVTAANKIKEQCPGSSSKVTIHEVEEG-----SEPLGFWDALGRKD--------------FNFAPRLFILSSS 755 (919)
T ss_pred CcchhhHhHHHHHHHHHhCCCccccceeEeecCC-----CCchhhhhhccccc--------------ccccceeeeccch
Confidence 999999999999999988764 45667888888 48889999998541 2457899977632
Q ss_pred e-eEE-----EEccccccccCCCceEEecCCceEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEecCCCCChh
Q 002298 220 Q-VKI-----VEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYETYA 293 (940)
Q Consensus 220 ~-l~~-----~e~~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~yl~~~~Rp~~t~I~~V~eG~Ep~~ 293 (940)
+ .++ +..+|+|++|.+- |+||.|.++|+|. ...+|+.||++|.+|++... .|-.+|..|.||..
T Consensus 756 qa~els~p~rc~~pFsQ~~Ly~a--fLvD~gdelwLW~----w~s~r~~Aleta~~Ywk~~~----~p~~vV~aGlEPl~ 825 (919)
T KOG0445|consen 756 QATELSYPARCPMPFSQEDLYSA--FLVDNGDELWLWQ----WASDRKSALETALQYWKNLK----APSYVVHAGLEPLT 825 (919)
T ss_pred hhhhccCcccCCCcccHHHHhhh--eeeccCCeeEeeh----hhhHHHHHHHHHHHHHhccC----CCceEEEcCcChhh
Confidence 2 111 1123999999865 9999999999998 77899999999999999433 35689999999999
Q ss_pred hHhcccCCCCCCCCCCCcc-chhhHHHHhhh--ccccccccCCCCCCCCCCCC
Q 002298 294 FKSNFDSWPSGSTAPGAEE-GRGKVAALLKQ--QGVGIKGMGKSTPTNEEVPP 343 (940)
Q Consensus 294 FK~~F~~W~~~~~~~~~~~-~rgkva~~~~~--~~~dv~~l~~~~p~~~e~~~ 343 (940)
||.+|.+|....+...... ...-+..++++ +.+-..+++.++|.++...|
T Consensus 826 Fk~lFp~We~red~D~~~s~~i~~v~d~La~~c~T~yple~l~arpLPeGvdp 878 (919)
T KOG0445|consen 826 FKNLFPSWEHREDIDTEVSNQITLVEDVLAKLCKTIYPLEDLLARPLPEGVDP 878 (919)
T ss_pred hhhhCCCceeccccCCCcCCchhHHHHHHHHHhhhcChHHHHhcCCCCCCCCc
Confidence 9999999997754322111 11112212222 22333334466777665544
No 7
>smart00262 GEL Gelsolin homology domain. Gelsolin/severin/villin homology domain. Calcium-binding and actin-binding. Both intra- and extracellular domains.
Probab=99.68 E-value=2e-16 Score=144.26 Aligned_cols=88 Identities=45% Similarity=0.764 Sum_probs=82.3
Q ss_pred EEEEecceeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhccCCCCceEEEecCCCCCC
Q 002298 98 LYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDT 177 (940)
Q Consensus 98 L~~vkGk~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~~~~G~~~i~iVdeG~~~~ 177 (940)
+++++|...+.+.+|++++++||++||||||++..||+|+|++|+..||.+|+++|+.+....+.+.++|.+|++|.
T Consensus 2 ~~~~~g~~~~~~~~~~~~~~~L~s~d~fild~~~~iyvW~G~~as~~ek~~A~~~a~~~~~~~~~~~~~i~~v~eg~--- 78 (90)
T smart00262 2 LVRVKGKRNVRVPEVPFSQGSLNSGDCYILDTGSEIYVWVGKKSSQDEKKKAAELAVELDDTLGPGPVQVRVVDEGK--- 78 (90)
T ss_pred eEEEeCCceEEEEEcCCCHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHhcCCCCceEEEEeCCC---
Confidence 68899999999999999999999999999999999999999999999999999999999887766778999999984
Q ss_pred CCChhhHHHHhCC
Q 002298 178 ESDSGEFWVLFGG 190 (940)
Q Consensus 178 ~~e~~eFw~~LGg 190 (940)
|+.+||.+|||
T Consensus 79 --E~~~F~~~f~~ 89 (90)
T smart00262 79 --EPPEFWSLFGG 89 (90)
T ss_pred --CCHHHHHHhCC
Confidence 78899999986
No 8
>PF02209 VHP: Villin headpiece domain; InterPro: IPR003128 Villin is an F-actin bundling protein involved in the maintenance of the microvilli of the absorptive epithelia. The villin-type "headpiece" domain is a modular motif found at the extreme C terminus of larger "core" domains in over 25 cytoskeletal proteins in plants and animals, often in assocation with the Gelsolin repeat. Although the headpiece is classified as an F-actin-binding domain, it has been shown that not all headpiece domains are intrinsically F-actin-binding motifs, surface charge distribution may be an important element for F-actin recognition []. An autonomously folding, 35 residue, thermostable subdomain (HP36) of the full-length 76 amino acid residue villin headpiece, is the smallest known example of a cooperatively folded domain of a naturally occurring protein. The structure of HP36, as determined by NMR spectroscopy, consists of three short helices surrounding a tightly packed hydrophobic core []. ; GO: 0003779 actin binding, 0007010 cytoskeleton organization; PDB: 1ZV6_A 1QZP_A 1UND_A 2PPZ_A 3TJW_B 1YU8_X 2JM0_A 1WY4_A 3MYC_A 1YU5_X ....
Probab=99.68 E-value=2e-17 Score=123.29 Aligned_cols=36 Identities=69% Similarity=1.199 Sum_probs=31.8
Q ss_pred CCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 905 YLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 905 yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
||||+||++||||+|+||++||+|||++|||++|||
T Consensus 1 YLsd~dF~~vFgm~~~eF~~lP~WKq~~lKK~~~LF 36 (36)
T PF02209_consen 1 YLSDEDFEKVFGMSREEFYKLPKWKQNNLKKKAGLF 36 (36)
T ss_dssp GS-HHHHHHHHSS-HHHHHHS-HHHHHHHHHHTTT-
T ss_pred CcCHHHHHHHHCCCHHHHHHChHHHHHHHHHHhCCC
Confidence 899999999999999999999999999999999999
No 9
>smart00153 VHP Villin headpiece domain.
Probab=99.67 E-value=3.4e-17 Score=122.52 Aligned_cols=36 Identities=67% Similarity=1.207 Sum_probs=35.7
Q ss_pred CCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 905 YLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 905 yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
||||+||+.||||||+||++||+|||++|||+++||
T Consensus 1 yLsdeeF~~vfgmsr~eF~~LP~WKq~~lKk~~~LF 36 (36)
T smart00153 1 YLSDEDFEEVFGMTREEFYKLPLWKQNQLKKKLGLF 36 (36)
T ss_pred CCCHHHHHHHHCCCHHHHHhCcHhhHHHHHhhcCCC
Confidence 899999999999999999999999999999999998
No 10
>smart00262 GEL Gelsolin homology domain. Gelsolin/severin/villin homology domain. Calcium-binding and actin-binding. Both intra- and extracellular domains.
Probab=99.67 E-value=3.5e-16 Score=142.70 Aligned_cols=87 Identities=32% Similarity=0.630 Sum_probs=76.1
Q ss_pred EEEeC-CeeEEEEccccccccCCCceEEecCCceEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEecCCCCCh
Q 002298 214 YSIED-SQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYETY 292 (940)
Q Consensus 214 y~v~~-G~l~~~e~~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~yl~~~~Rp~~t~I~~V~eG~Ep~ 292 (940)
+++.. ..+.+.++.+++++|++++|||||++.+||||+|++|+..||..|+..|+.|++..+ +.+++|.+|.||.||.
T Consensus 3 ~~~~g~~~~~~~~~~~~~~~L~s~d~fild~~~~iyvW~G~~as~~ek~~A~~~a~~~~~~~~-~~~~~i~~v~eg~E~~ 81 (90)
T smart00262 3 VRVKGKRNVRVPEVPFSQGSLNSGDCYILDTGSEIYVWVGKKSSQDEKKKAAELAVELDDTLG-PGPVQVRVVDEGKEPP 81 (90)
T ss_pred EEEeCCceEEEEEcCCCHHHCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHhcC-CCCceEEEEeCCCCCH
Confidence 44442 234444556999999999999999999999999999999999999999999998765 6679999999999999
Q ss_pred hhHhcccCC
Q 002298 293 AFKSNFDSW 301 (940)
Q Consensus 293 ~FK~~F~~W 301 (940)
.|+.+|.+|
T Consensus 82 ~F~~~f~~~ 90 (90)
T smart00262 82 EFWSLFGGW 90 (90)
T ss_pred HHHHHhCCC
Confidence 999999988
No 11
>KOG1044 consensus Actin-binding LIM Zn-finger protein Limatin involved in axon guidance [Signal transduction mechanisms; Cytoskeleton]
Probab=99.48 E-value=1.2e-14 Score=164.50 Aligned_cols=63 Identities=35% Similarity=0.598 Sum_probs=60.3
Q ss_pred CcccChHHHhhcc---CCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 878 RSTFSYDQLKARS---DNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 878 ~~~~~~~~l~~~~---~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
.++|||+.|+.++ .+||++||++++|+||+.|||.+||||+.+||++||.||+|+|||+++||
T Consensus 605 ~KiypYe~L~vTnrgr~klp~dVDRtrLERHL~~e~F~eiF~MSi~EF~rL~LWkRnnlKkkAkLF 670 (670)
T KOG1044|consen 605 PKIYPYEMLMVTNRGRNKLPRDVDRTRLERHLSPEDFSEIFGMSISEFDRLPLWKRNNLKKKAKLF 670 (670)
T ss_pred ccccChHHheecccccccCcccchhhHHhhccCHHHHHHHhccCHhhhchhhhhhhhhhhhhhccC
Confidence 5799999999555 88999999999999999999999999999999999999999999999999
No 12
>PF00626 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gelsolin is a cytoplasmic, calcium-regulated, actin-modulating protein that binds to the barbed ends of actin filaments, preventing monomer exchange (end-blocking or capping) []. It can promote nucleation (the assembly of monomers into filaments), as well as sever existing filaments. In addition, this protein binds with high affinity to fibronectin. Plasma gelsolin and cytoplasmic gelsolin are derived from a single gene by alternate initiation sites and differential splicing. Sequence comparisons indicate an evolutionary relationship between gelsolin, villin, fragmin and severin []. Six large repeating segments occur in gelsolin and villin, and 3 similar segments in severin and fragmin. While the multiple repeats have yet to be related to any known function of the actin-severing proteins, the superfamily appears to have evolved from an ancestral sequence of 120 to 130 amino acid residues [].; PDB: 3FG6_F 1RGI_G 2FGH_A 1D0N_B 3EGD_B 2NUP_B 2NUT_B 3EGX_B 1JHW_A 1J72_A ....
Probab=99.36 E-value=8.8e-13 Score=116.07 Aligned_cols=69 Identities=42% Similarity=0.706 Sum_probs=63.8
Q ss_pred ccccccccCCCceEEecCCceEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEecCCCCChhhH
Q 002298 226 GELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYETYAFK 295 (940)
Q Consensus 226 ~~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~yl~~~~Rp~~t~I~~V~eG~Ep~~FK 295 (940)
..+++++|++++|||||++.+||||+|++++..+|..|+..|+++. ...|+.++.+.+|.||.||..|.
T Consensus 8 ~~~s~~~L~s~~~yIld~~~~i~vW~G~~~~~~e~~~a~~~a~~~~-~~~~~~~~~~~~~~eg~E~~~F~ 76 (76)
T PF00626_consen 8 VPLSQSSLNSDDCYILDCGYEIFVWVGKKSSPEEKAFAAQLAQELL-SEERPPLPEVIRVEEGKEPAEFL 76 (76)
T ss_dssp ESSSGGGEETTSEEEEEESSEEEEEEHTTSHHHHHHHHHHHHHHHH-HHHTTTTSEEEEEETTHHHHHHH
T ss_pred CCCCHHHcCCCCEEEEEeCCCcEEEEeccCCHHHHHHHHHHHHHhh-hhcCCCCCEEEEecCCCCChHHC
Confidence 3499999999999999999999999999999999999999999998 44577789999999999999983
No 13
>PF00626 Gelsolin: Gelsolin repeat; InterPro: IPR007123 Gelsolin is a cytoplasmic, calcium-regulated, actin-modulating protein that binds to the barbed ends of actin filaments, preventing monomer exchange (end-blocking or capping) []. It can promote nucleation (the assembly of monomers into filaments), as well as sever existing filaments. In addition, this protein binds with high affinity to fibronectin. Plasma gelsolin and cytoplasmic gelsolin are derived from a single gene by alternate initiation sites and differential splicing. Sequence comparisons indicate an evolutionary relationship between gelsolin, villin, fragmin and severin []. Six large repeating segments occur in gelsolin and villin, and 3 similar segments in severin and fragmin. While the multiple repeats have yet to be related to any known function of the actin-severing proteins, the superfamily appears to have evolved from an ancestral sequence of 120 to 130 amino acid residues [].; PDB: 3FG6_F 1RGI_G 2FGH_A 1D0N_B 3EGD_B 2NUP_B 2NUT_B 3EGX_B 1JHW_A 1J72_A ....
Probab=99.34 E-value=1.9e-12 Score=113.96 Aligned_cols=74 Identities=38% Similarity=0.512 Sum_probs=68.2
Q ss_pred EEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhccCCCCceEEEecCCCCCCCCChhhHH
Q 002298 107 VRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGKLDTESDSGEFW 185 (940)
Q Consensus 107 v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~~~~G~~~i~iVdeG~~~~~~e~~eFw 185 (940)
+++.++++++++||++||||||++..||+|.|+.|+..||.+|..+|+.|...++.+.+.+.++++|+ |+..||
T Consensus 3 ~~~~~~~~s~~~L~s~~~yIld~~~~i~vW~G~~~~~~e~~~a~~~a~~~~~~~~~~~~~~~~~~eg~-----E~~~F~ 76 (76)
T PF00626_consen 3 VRPEQVPLSQSSLNSDDCYILDCGYEIFVWVGKKSSPEEKAFAAQLAQELLSEERPPLPEVIRVEEGK-----EPAEFL 76 (76)
T ss_dssp EEEEEESSSGGGEETTSEEEEEESSEEEEEEHTTSHHHHHHHHHHHHHHHHHHHTTTTSEEEEEETTH-----HHHHHH
T ss_pred ccCCcCCCCHHHcCCCCEEEEEeCCCcEEEEeccCCHHHHHHHHHHHHHhhhhcCCCCCEEEEecCCC-----CChHHC
Confidence 56788999999999999999999999999999999999999999999999855677889999999985 788887
No 14
>COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
Probab=96.37 E-value=0.01 Score=71.53 Aligned_cols=117 Identities=21% Similarity=0.303 Sum_probs=78.1
Q ss_pred CCCeeEEEEe---cC-----CeeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHHHH-----------
Q 002298 578 RDPHLFTFSF---NK-----GKFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAFEF----------- 638 (940)
Q Consensus 578 ~~prLF~~S~---~~-----G~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~~Al~~----------- 638 (940)
..|+||.+.+ +. |.++.-.--|.+-+-|.+..+||||+|.+||+|+|+.+++......+..
T Consensus 708 iYP~lyalHdm~~e~~l~~~~~~~~~~piNaT~s~le~~GlYLidtg~~iflw~g~d~~p~Ll~dlf~~~~~~~I~~~k~ 787 (861)
T COG5028 708 IYPTLYALHDMPIEAGLPDEGLLVLPSPINATSSLLESGGLYLIDTGQKIFLWFGKDAVPSLLQDLFGVDSLSDIPSGKF 787 (861)
T ss_pred hccceeeecccccccCCCcccccccccchhhhHHHHhcCCeEEEEcCCEEEEEecCCCCHHHHHHhcCcchhhhcccccc
Confidence 6799998763 22 2222222247889999999999999999999999999987655433322
Q ss_pred ------------HHHHHHhhccccCCCCCCcEEEecCCCCCcccccccc--cCCCCccccCccHHHHHHHHhc
Q 002298 639 ------------GQNYIDMATSLEGLSPKVPLYKVTEGNEPCFCTTFFS--WDPTKATVQGNSFQKKVALLFG 697 (940)
Q Consensus 639 ------------A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~Ft~~F~--Wd~~k~~~~~~s~~~~~~~~~~ 697 (940)
+.+-|..-.. -.+...-|+++|.+|.+|. ...||. -=..+.. +.-||.+.|.+++.
T Consensus 788 ~~p~~~n~~n~~v~~iI~~lrs-~~~~~tl~lvlVR~~~d~s-~~~~~~s~lVEDk~~-n~~SY~~yL~~lh~ 857 (861)
T COG5028 788 TLPPTGNEFNERVRNIIGELRS-VNDDSTLPLVLVRGGGDPS-LRLWFFSTLVEDKTL-NIPSYLDYLQILHE 857 (861)
T ss_pred ccCCcCCHHHHHHHHHHHHHHh-hCCCCccceEEEecCCCcc-hhhheehheeccccc-CCccHHHHHHHHHH
Confidence 2222222111 0234567799999999998 555553 3344444 48999999988864
No 15
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.90 E-value=0.036 Score=67.74 Aligned_cols=111 Identities=23% Similarity=0.289 Sum_probs=75.0
Q ss_pred CCCeeEEEEec--CCeee--EEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHH--------------------
Q 002298 578 RDPHLFTFSFN--KGKFE--VEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQ-------------------- 633 (940)
Q Consensus 578 ~~prLF~~S~~--~G~~~--v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~-------------------- 633 (940)
..|||+.+..- ...+. +-.-...+.+-|..++|||||+|..+|||||+.++....+
T Consensus 857 ~YPrl~p~hdl~i~dtl~~~~p~~VraS~e~l~negiYll~nG~~~ylwvg~sv~~~llQ~lf~V~s~~~i~s~~~~Lpe 936 (1007)
T KOG1984|consen 857 FYPRLLPFHDLDIEDTLEFVLPKAVRASSEFLSNEGIYLLDNGQKIYLWVGESVDPDLLQDLFSVSSFEQIDSQSGVLPE 936 (1007)
T ss_pred hccceeeeeccccccccccccccceecchhhccCCceEEEecCcEEEEEecCCCCHHHHHHHhcCccccccccccccccc
Confidence 78999887752 22221 1112468889999999999999999999999999754321
Q ss_pred ------HHHHHHHHHHHhhccccCCCCCCcEEEecCCCCCcccccccc-cCCCCccccCccHHHHHHHH
Q 002298 634 ------SAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQKKVALL 695 (940)
Q Consensus 634 ------~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~ 695 (940)
..+.-+..+|++ -|+...|+.+|++|.++.. ..|. ---.....++.||-..|..|
T Consensus 937 ~dn~lS~k~r~~i~~i~~-----~r~~~l~v~~~k~g~~~~~--~~~~~~lved~~~~~~sY~dyL~~~ 998 (1007)
T KOG1984|consen 937 LDNPLSRKVRNVISLIRR-----QRSSELPVVLVKQGLDGSE--VEFSEYLVEDRGRNISSYVDYLCEL 998 (1007)
T ss_pred cCcHHHHHHHHHHHHHHh-----ccccccccEEEecCCCchh--hhhhhhhhcccccCccccchHHHHH
Confidence 233445566665 2567899999999999886 3332 22222222478888877665
No 16
>PTZ00395 Sec24-related protein; Provisional
Probab=95.58 E-value=0.044 Score=70.00 Aligned_cols=116 Identities=14% Similarity=0.240 Sum_probs=70.2
Q ss_pred CCCeeEEEEec-----------CCeeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHHH---------
Q 002298 578 RDPHLFTFSFN-----------KGKFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAFE--------- 637 (940)
Q Consensus 578 ~~prLF~~S~~-----------~G~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~~Al~--------- 637 (940)
..||||.+.+- .+.+.+-.-.+.+.+-|..+.|||||+|..||||||+.+++..-+.-+-
T Consensus 1403 LYPRLYpLHdL~~e~e~d~~d~d~~ivLPp~LrLS~ErLesdGIYLLDNGe~IyLWVG~~V~PqLLqDLFGv~~~~~~~~ 1482 (1560)
T PTZ00395 1403 VYPVMYVIHIKGKTNEIDSMDVDDDLFIPKTIPSSAEKIYSNGIYLLDACTHFYLYFGFHSDANFAKEIVGDIPTEKNAH 1482 (1560)
T ss_pred hcCceEEcccccccccCCccCCCCccccCCcccchHHHhcCCcEEEEECCCEEEEEECCCCCHHHHHHHcCCCccccccc
Confidence 68999987652 1222222334688889999999999999999999999998754332221
Q ss_pred -----------HHHHHHHhhccccCCCCCCcEEEecCC--CCCcccccccccCCCCccccCccHHHHHHHHhc
Q 002298 638 -----------FGQNYIDMATSLEGLSPKVPLYKVTEG--NEPCFCTTFFSWDPTKATVQGNSFQKKVALLFG 697 (940)
Q Consensus 638 -----------~A~~Yl~~~~~~~~r~~~~pI~~V~qG--~EP~~Ft~~F~Wd~~k~~~~~~s~~~~~~~~~~ 697 (940)
-+...|+.-...+.+.+..|+++|.++ .|+. |..++. ++. .. ..-||.+.|..|..
T Consensus 1483 eLPelDT~iS~RVrnII~~LR~~r~~~~Y~pL~IVRqgDp~E~~-F~s~LV-EDR-s~-g~~SYvDFLc~LHK 1551 (1560)
T PTZ00395 1483 ELNLTDTPNAQKVQRIIKNLSRIHHFNKYVPLVMVAPKSNEEEH-LISLCV-EDK-AD-KEYSYVNFLCFIHK 1551 (1560)
T ss_pred cccCCCCHHHHHHHHHHHHHHHhccCCCcceEEEEeCCCchHHH-HHHhCe-ecC-CC-CCCCHHHHHHHHHH
Confidence 011111111111112356788888776 3432 333332 333 22 36799999888764
No 17
>KOG1984 consensus Vesicle coat complex COPII, subunit SFB3 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.88 E-value=0.3 Score=60.10 Aligned_cols=66 Identities=24% Similarity=0.467 Sum_probs=52.4
Q ss_pred cccccccCCCceEEecCCceEEEEEcCCCCHHHHH--------------------------HHHHHHHHHHHhcCCCCCc
Q 002298 227 ELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERK--------------------------AASQAAEEFISSQNRPKSI 280 (940)
Q Consensus 227 ~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~eRk--------------------------~A~~~A~~yl~~~~Rp~~t 280 (940)
.++.+-|...+|||||+|..||+|+|..++..-.+ ..++.+..+|.. -|+...
T Consensus 882 raS~e~l~negiYll~nG~~~ylwvg~sv~~~llQ~lf~V~s~~~i~s~~~~Lpe~dn~lS~k~r~~i~~i~~-~r~~~l 960 (1007)
T KOG1984|consen 882 RASSEFLSNEGIYLLDNGQKIYLWVGESVDPDLLQDLFSVSSFEQIDSQSGVLPELDNPLSRKVRNVISLIRR-QRSSEL 960 (1007)
T ss_pred ecchhhccCCceEEEecCcEEEEEecCCCCHHHHHHHhcCccccccccccccccccCcHHHHHHHHHHHHHHh-cccccc
Confidence 48899999999999999999999999998754332 334445566666 566678
Q ss_pred eEEEecCCCCChh
Q 002298 281 RITRVIQGYETYA 293 (940)
Q Consensus 281 ~I~~V~eG~Ep~~ 293 (940)
++..+.+|.++.+
T Consensus 961 ~v~~~k~g~~~~~ 973 (1007)
T KOG1984|consen 961 PVVLVKQGLDGSE 973 (1007)
T ss_pred ccEEEecCCCchh
Confidence 9999999988876
No 18
>KOG1985 consensus Vesicle coat complex COPII, subunit SEC24/subunit SFB2 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.79 E-value=0.17 Score=62.01 Aligned_cols=114 Identities=17% Similarity=0.269 Sum_probs=71.1
Q ss_pred CCCeeEEEEecC---Cee------eEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHH-----------------
Q 002298 578 RDPHLFTFSFNK---GKF------EVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKE----------------- 631 (940)
Q Consensus 578 ~~prLF~~S~~~---G~~------~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~e----------------- 631 (940)
..|.||.+..-. |.. .+-..-+.+-+-|....+||+|||.++|||+|+.|.+.-
T Consensus 734 IYP~Lysl~~l~~ea~~~~~d~~~~~p~~L~ltae~l~~~GlyL~D~g~~lfl~vg~~a~P~ll~~vfg~~~~adi~~~~ 813 (887)
T KOG1985|consen 734 IYPTLYSLHDLDDEAGLPIHDQTVVLPPPLNLTAELLSRRGLYLMDTGTTLFLWVGSNADPSLLFDVFGVSTLADIPIGK 813 (887)
T ss_pred hcccceeccccccccCcccccccccCCCccchHHHHhccCceEEEecCcEEEEEEcCCCCccccccccCcchHhhccccc
Confidence 678999876422 222 112234778888999999999999999999999996321
Q ss_pred -----H-HHHHHHHHHHHHhhccccCCCCCCcE-EEecCCCCCcccccccc---cCCCCccccCccHHHHHHHHhc
Q 002298 632 -----K-QSAFEFGQNYIDMATSLEGLSPKVPL-YKVTEGNEPCFCTTFFS---WDPTKATVQGNSFQKKVALLFG 697 (940)
Q Consensus 632 -----k-~~Al~~A~~Yl~~~~~~~~r~~~~pI-~~V~qG~EP~~Ft~~F~---Wd~~k~~~~~~s~~~~~~~~~~ 697 (940)
+ ..-.+-...+|+.-. +++ ...|. ++|+++ |-..-+.+|. =++ +.. .--||-+.|..||.
T Consensus 814 ~~lp~~~n~~s~r~~~fI~~lR--~d~-~~~p~~~ivr~~-~~s~~k~~f~~~lvED-rs~-~~~SY~efLq~lk~ 883 (887)
T KOG1985|consen 814 YTLPELDNEESDRVRRFIKKLR--DDR-TYFPNLYIVRGD-DNSPLKAWFFSRLVED-RSE-NSPSYYEFLQHLKA 883 (887)
T ss_pred ccCcccccchhHHHHHHHHHhh--cCC-cccceEEEEecC-CCchHHHHHHHHHHhh-hhc-CcHHHHHHHHHHHH
Confidence 1 112244555665532 122 33444 555555 5555566663 344 333 25799999988873
No 19
>PTZ00395 Sec24-related protein; Provisional
Probab=92.51 E-value=0.29 Score=63.01 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=30.0
Q ss_pred cccccccCCCceEEecCCceEEEEEcCCCCHHH
Q 002298 227 ELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEE 259 (940)
Q Consensus 227 ~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~e 259 (940)
.++.+-|.+++|||||+|..||+|+|+.++.+-
T Consensus 1435 rLS~ErLesdGIYLLDNGe~IyLWVG~~V~PqL 1467 (1560)
T PTZ00395 1435 PSSAEKIYSNGIYLLDACTHFYLYFGFHSDANF 1467 (1560)
T ss_pred cchHHHhcCCcEEEEECCCEEEEEECCCCCHHH
Confidence 388899999999999999999999999987654
No 20
>COG5028 Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
Probab=92.45 E-value=0.19 Score=60.99 Aligned_cols=67 Identities=22% Similarity=0.369 Sum_probs=49.5
Q ss_pred ccccccccCCCceEEecCCceEEEEEcCCCCHHHHHHHHHH-----------------------HHHHH---HhcCCCCC
Q 002298 226 GELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKAASQA-----------------------AEEFI---SSQNRPKS 279 (940)
Q Consensus 226 ~~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~eRk~A~~~-----------------------A~~yl---~~~~Rp~~ 279 (940)
+.++.+.|++.++|+||+|.+||+|+|+.+.+.-....+.. +...| ++..+-..
T Consensus 736 iNaT~s~le~~GlYLidtg~~iflw~g~d~~p~Ll~dlf~~~~~~~I~~~k~~~p~~~n~~n~~v~~iI~~lrs~~~~~t 815 (861)
T COG5028 736 INATSSLLESGGLYLIDTGQKIFLWFGKDAVPSLLQDLFGVDSLSDIPSGKFTLPPTGNEFNERVRNIIGELRSVNDDST 815 (861)
T ss_pred hhhhHHHHhcCCeEEEEcCCEEEEEecCCCCHHHHHHhcCcchhhhccccccccCCcCCHHHHHHHHHHHHHHhhCCCCc
Confidence 34899999999999999999999999999987655443322 22222 23344444
Q ss_pred ceEEEecCCCCCh
Q 002298 280 IRITRVIQGYETY 292 (940)
Q Consensus 280 t~I~~V~eG~Ep~ 292 (940)
.++..|.+|.+|.
T Consensus 816 l~lvlVR~~~d~s 828 (861)
T COG5028 816 LPLVLVRGGGDPS 828 (861)
T ss_pred cceEEEecCCCcc
Confidence 6788999999988
No 21
>KOG1985 consensus Vesicle coat complex COPII, subunit SEC24/subunit SFB2 [Intracellular trafficking, secretion, and vesicular transport]
Probab=81.52 E-value=0.93 Score=55.79 Aligned_cols=29 Identities=34% Similarity=0.819 Sum_probs=27.4
Q ss_pred ccccccCCCceEEecCCceEEEEEcCCCC
Q 002298 228 LSKSMLENNKCYLLDRGSEVFVWVGRVTQ 256 (940)
Q Consensus 228 l~q~~L~s~~vyILD~g~eIyVWiGk~as 256 (940)
++-+.|+....|++|||..+|+|+|+.|.
T Consensus 765 ltae~l~~~GlyL~D~g~~lfl~vg~~a~ 793 (887)
T KOG1985|consen 765 LTAELLSRRGLYLMDTGTTLFLWVGSNAD 793 (887)
T ss_pred hHHHHhccCceEEEecCcEEEEEEcCCCC
Confidence 78899999999999999999999999975
No 22
>PLN00162 transport protein sec23; Provisional
Probab=79.81 E-value=5.1 Score=50.70 Aligned_cols=45 Identities=27% Similarity=0.475 Sum_probs=35.6
Q ss_pred CCCCeeEEEEecCCeeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcC
Q 002298 577 VRDPHLFTFSFNKGKFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQ 625 (940)
Q Consensus 577 ~~~prLF~~S~~~G~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~ 625 (940)
..+|+||..++..- -+-..++.+-|.+|.|+|||++..|+||.|.
T Consensus 618 mI~P~L~sy~~~~~----P~pv~Ld~~si~~d~ilLLD~~f~vvi~~G~ 662 (761)
T PLN00162 618 MIQPTLISYSFNGP----PEPVLLDVASIAADRILLLDSYFSVVIFHGS 662 (761)
T ss_pred hhCCeEEEecCCCC----CcceecchhhccCCceEEEeCCCEEEEEecC
Confidence 47899999886421 1223567788899999999999999999995
No 23
>PLN00162 transport protein sec23; Provisional
Probab=68.61 E-value=18 Score=45.92 Aligned_cols=82 Identities=20% Similarity=0.179 Sum_probs=50.9
Q ss_pred CCCeEEEEe-CCeeEEEEccccccccCCCceEEecCCceEEEEEcCCCC------------HHHHHH----HHHHHHHHH
Q 002298 209 TPPKLYSIE-DSQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQ------------VEERKA----ASQAAEEFI 271 (940)
Q Consensus 209 ~~~rLy~v~-~G~l~~~e~~l~q~~L~s~~vyILD~g~eIyVWiGk~as------------~~eRk~----A~~~A~~yl 271 (940)
..|+||.+. ++... .+.|+-+-|.++.+||||+|..|+||.|.... .+..+. ...-|++++
T Consensus 619 I~P~L~sy~~~~~P~--pv~Ld~~si~~d~ilLLD~~f~vvi~~G~~ia~w~~~~~~~~~~~~~~~~~l~~p~~~a~~~~ 696 (761)
T PLN00162 619 IQPTLISYSFNGPPE--PVLLDVASIAADRILLLDSYFSVVIFHGSTIAQWRKAGYHNQPEHEAFAQLLEAPQADAQAII 696 (761)
T ss_pred hCCeEEEecCCCCCc--ceecchhhccCCceEEEeCCCEEEEEecCcccchhhcCCCCCcchhhHHHHHHhHHHHHHHHH
Confidence 357888776 44322 22378888999999999999999999995321 112233 334455544
Q ss_pred HhcCCCCCceEEEecCCCCChhh
Q 002298 272 SSQNRPKSIRITRVIQGYETYAF 294 (940)
Q Consensus 272 ~~~~Rp~~t~I~~V~eG~Ep~~F 294 (940)
+ .|.....+....||.--+-|
T Consensus 697 ~--~Rfp~Pr~i~~~~~~SqaRf 717 (761)
T PLN00162 697 K--ERFPVPRLVVCDQHGSQARF 717 (761)
T ss_pred h--cCCCCCeEEEeCCCCcHHHH
Confidence 3 46443566666676554444
No 24
>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma. ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....
Probab=55.19 E-value=49 Score=31.79 Aligned_cols=55 Identities=13% Similarity=0.358 Sum_probs=37.6
Q ss_pred ceeeeCcEEEEEEeee---cCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCC
Q 002298 370 GKFYSGDCYIVLYTYH---SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKG 424 (940)
Q Consensus 370 G~FysgDcYIVlytY~---~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g 424 (940)
.+|-..+|.-++|.|. .+..+...++.+|.+..++..++..-+..-..+.+.+++
T Consensus 47 ~~l~~~~p~y~~~~~~~~~~~~~~~k~vfI~w~P~~~~vk~km~yas~k~~l~~~l~~ 104 (127)
T PF00241_consen 47 SHLPDDEPRYILYRFEYTHKGSRRSKLVFIYWCPDNAPVKEKMLYASSKASLKKKLGG 104 (127)
T ss_dssp HCSCTTSEEEEEEEEEEEETTSEEEEEEEEEEESTTS-HHHHHHHHHHHHHHHHHCTT
T ss_pred HhcccCCcEEEEEEeeecccCCCCceEEEEEEecCCccHHHhhhhHHhHHHHHHHhCC
Confidence 3455667665566553 344456777889999999999998766666667777776
No 25
>KOG3655 consensus Drebrins and related actin binding proteins [Cytoskeleton]
Probab=54.54 E-value=24 Score=41.47 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=50.2
Q ss_pred cCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe--EEEeecCCCCHHHHhhcCC
Q 002298 386 SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV--QGRIFQGREPPQFVALFQP 446 (940)
Q Consensus 386 ~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v--q~Rv~QGkEp~~Fl~iF~~ 446 (940)
+.++...++|-.|+|..+..--++.|+.++..+.+.|+|-.| ++|...-=++..|+.-...
T Consensus 73 ~~s~l~KfvLI~W~GE~vp~~Rka~~ath~a~v~~~lkg~hV~i~Ar~e~Dld~d~i~~~ls~ 135 (484)
T KOG3655|consen 73 PMSGLPKFVLINWIGEGVPVLRKAKCATHKALVKNFLKGFHVEINARSEEDLDEDAIREKLSK 135 (484)
T ss_pred cccCCcceEEEEecCCccHHHhhhhhcchHHHHHHHhhcceEEEeccchhhcCHHHHHHHHHh
Confidence 566778999999999999988889999999999999998776 4677777777777776653
No 26
>smart00102 ADF Actin depolymerisation factor/cofilin -like domains. Severs actin filaments and binds to actin monomers.
Probab=42.07 E-value=90 Score=30.12 Aligned_cols=54 Identities=17% Similarity=0.385 Sum_probs=37.1
Q ss_pred eeeeCcEEEEEEeee-c--CCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCC
Q 002298 371 KFYSGDCYIVLYTYH-S--GDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKG 424 (940)
Q Consensus 371 ~FysgDcYIVlytY~-~--~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g 424 (940)
.|-..+|--++|.|. + +..+...++.+|.|..++..++...+.....+...++|
T Consensus 48 ~l~~~~~ry~~~~~~~~~~~~~~~k~vfI~w~P~~a~~~~km~yas~k~~l~~~l~~ 104 (127)
T smart00102 48 ELPEDECRYALYDYKFTTEESKKSKIVFIFWSPDGAPVKSKMLYASSKDTLKKELGG 104 (127)
T ss_pred hCCccCceEEEEEeecccCCCccccEEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 455566644555652 1 23455678889999999999998777666666677765
No 27
>KOG3655 consensus Drebrins and related actin binding proteins [Cytoskeleton]
Probab=41.99 E-value=47 Score=39.22 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=52.4
Q ss_pred EEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEE--EEeccCCcHHHHhccC
Q 002298 4 CYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQH--RELQGHESDKFLSYFK 72 (940)
Q Consensus 4 ~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~--RevQG~Es~~Fls~Fk 72 (940)
.|+.+.+....++...+.|--|+|.++..-.++.+|.+...+.+.|.|-.|++ |...--+.+.|+.-..
T Consensus 64 ~yg~~rv~D~~s~l~KfvLI~W~GE~vp~~Rka~~ath~a~v~~~lkg~hV~i~Ar~e~Dld~d~i~~~ls 134 (484)
T KOG3655|consen 64 MYGFCRVKDPMSGLPKFVLINWIGEGVPVLRKAKCATHKALVKNFLKGFHVEINARSEEDLDEDAIREKLS 134 (484)
T ss_pred eEEEEEecCcccCCcceEEEEecCCccHHHhhhhhcchHHHHHHHhhcceEEEeccchhhcCHHHHHHHHH
Confidence 46666554444555678889999999999999999999999999999988764 4555556666666554
No 28
>smart00102 ADF Actin depolymerisation factor/cofilin -like domains. Severs actin filaments and binds to actin monomers.
Probab=37.76 E-value=1.3e+02 Score=28.92 Aligned_cols=51 Identities=16% Similarity=0.094 Sum_probs=37.5
Q ss_pred CcEEEEeeeccC--CCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCC
Q 002298 2 GDCYIVLQTTPG--KGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGR 52 (940)
Q Consensus 2 GD~YIVL~t~~~--~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~ 52 (940)
..+|+|+..-.. .+..-...+.+|++..++.-++..-|..-..|-..|+|-
T Consensus 53 ~~ry~~~~~~~~~~~~~~~k~vfI~w~P~~a~~~~km~yas~k~~l~~~l~~~ 105 (127)
T smart00102 53 ECRYALYDYKFTTEESKKSKIVFIFWSPDGAPVKSKMLYASSKDTLKKELGGI 105 (127)
T ss_pred CceEEEEEeecccCCCccccEEEEEECCCCCCHHHHHHHHHHHHHHHHHcCCc
Confidence 357998874321 122234677889999999999988888888888899873
No 29
>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma. ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....
Probab=36.64 E-value=1e+02 Score=29.47 Aligned_cols=60 Identities=25% Similarity=0.364 Sum_probs=40.2
Q ss_pred cEEEEeeec-cCCCCC-ccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcH
Q 002298 3 DCYIVLQTT-PGKGGA-YLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESD 65 (940)
Q Consensus 3 D~YIVL~t~-~~~~~~-~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~ 65 (940)
-||+++... ...++. ....+.+|++.+++.-++..-|..-..|-..|++ -+.++|.++..
T Consensus 54 p~y~~~~~~~~~~~~~~~k~vfI~w~P~~~~vk~km~yas~k~~l~~~l~~---~~~~~~~~d~~ 115 (127)
T PF00241_consen 54 PRYILYRFEYTHKGSRRSKLVFIYWCPDNAPVKEKMLYASSKASLKKKLGG---IHIEIQASDPD 115 (127)
T ss_dssp EEEEEEEEEEEETTSEEEEEEEEEEESTTS-HHHHHHHHHHHHHHHHHCTT---EEEEEEESSGG
T ss_pred cEEEEEEeeecccCCCCceEEEEEEecCCccHHHhhhhHHhHHHHHHHhCC---ceEEEEECChH
Confidence 488888642 222333 2355568999999998888888788888888987 34466665543
No 30
>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments.
Probab=35.25 E-value=1.8e+02 Score=28.00 Aligned_cols=55 Identities=16% Similarity=0.379 Sum_probs=35.4
Q ss_pred eeeeCcEEEEEEeee-c--CCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCC
Q 002298 371 KFYSGDCYIVLYTYH-S--GDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGR 425 (940)
Q Consensus 371 ~FysgDcYIVlytY~-~--~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~ 425 (940)
+|-..+|.-++|.|. . +..+...++.+|.+..++..++..-+..-..+.+.++|-
T Consensus 54 ~l~~~~~~y~~~~~~~~~~~~~~~k~vfI~w~P~~a~~k~km~yas~k~~l~~~l~~~ 111 (132)
T cd00013 54 ELPEDECRYALYDYDFTTEGSKKSKIVFIYWSPETAPVKSKMLYASSKAALKRELVGI 111 (132)
T ss_pred hCCcCCceEEEEEecccCCCccccCEEEEEECCCCCChhhhhhhHHHHHHHHHhcCCc
Confidence 455566655555653 1 134567889999999999999876555444555556544
No 31
>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments.
Probab=34.36 E-value=1.4e+02 Score=28.65 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=40.1
Q ss_pred CcEEEEeeeccCC--CCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCc
Q 002298 2 GDCYIVLQTTPGK--GGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHES 64 (940)
Q Consensus 2 GD~YIVL~t~~~~--~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es 64 (940)
..||+++...... +......+.+|++..++.-++..-|..-..|-..|+|- +.+++..+.
T Consensus 59 ~~~y~~~~~~~~~~~~~~~k~vfI~w~P~~a~~k~km~yas~k~~l~~~l~~~---~~~i~a~~~ 120 (132)
T cd00013 59 ECRYALYDYDFTTEGSKKSKIVFIYWSPETAPVKSKMLYASSKAALKRELVGI---QVEVQATDP 120 (132)
T ss_pred CceEEEEEecccCCCccccCEEEEEECCCCCChhhhhhhHHHHHHHHHhcCCc---eEEEEECCh
Confidence 3579988753221 22345788899999999988877777777777778764 333444443
No 32
>PF11330 DUF3132: Protein of unknown function (DUF3132); InterPro: IPR021479 This entry is represented by the Citrus psorosis virus, 54kDa protein; it is a family of uncharacterised viral proteins.
Probab=22.12 E-value=67 Score=29.37 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=28.7
Q ss_pred CCEEEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 002298 608 EDILILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYI 643 (940)
Q Consensus 608 ddv~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl 643 (940)
+-|||||..++=-.||-..+-.+.....-+.|.+|+
T Consensus 88 evvmildsrdegrmwikddvwaevtehgsksareyc 123 (124)
T PF11330_consen 88 EVVMILDSRDEGRMWIKDDVWAEVTEHGSKSAREYC 123 (124)
T ss_pred cEEEEEeccccCceeeechhHHHHHhhcchhhHhhc
Confidence 349999999999999998777666666667777775
No 33
>PF05176 ATP-synt_10: ATP10 protein; InterPro: IPR007849 This entry represents the ATPase assembly factor ATP10 found in mitochondria, which is essential for the assembly of the mitochondrial F1-F0 complex. A yeast nuclear gene (ATP10) encodes a product that is essential for the assembly of a functional mitochondrial ATPase complex. Mutations in ATP10 induce a loss of rutamycin sensitivity in the mitochondrial ATPase, but do not affect the respiratory enzymes. ATP10 has an Mr of 30,293 and its primary structure is not related to any known subunit of the yeast or mammalian mitochondrial ATPase complexes. ATP10 is associated with the mitochondrial membrane. It is suggested that the ATP10 product is not a subunit of the ATPase complex but rather a protein required for the assembly of the F0 sector of the complex [].; GO: 0033615 mitochondrial proton-transporting ATP synthase complex assembly, 0005743 mitochondrial inner membrane
Probab=21.02 E-value=1.8e+02 Score=32.09 Aligned_cols=104 Identities=15% Similarity=0.200 Sum_probs=59.9
Q ss_pred hHhHHHHHHHHHHHHhCCC--ceEEEEeccCCcHH---HHhccCCCEEEecCcccCCCccccccccceEEEEEecceeEE
Q 002298 34 EAGTAAIKTVELDAVLGGR--AVQHRELQGHESDK---FLSYFKPCIIPLEGGVASGFRKTEEEEFETRLYVCKGKRVVR 108 (940)
Q Consensus 34 e~g~AA~~aveLd~~Lgg~--~vq~RevQG~Es~~---Fls~Fk~~ii~~~Gg~~sgf~~~e~~~~~~rL~~vkGk~~v~ 108 (940)
|.-+..+..-.+.++++.. .+|+-++-=-|+-. ++.+|.+.| .. .+.++.+..-++.-++.-.-.
T Consensus 136 e~~~~sw~~p~~~~~~~~~~~~~q~v~In~~e~~~k~~l~~~~~~~l-------rk---~ip~~~h~~Yf~~~~~~~~~~ 205 (252)
T PF05176_consen 136 EEMVDSWTSPFLEDFLQEPYGRVQIVEINLIENWLKSWLVKLFMGSL-------RK---SIPEERHDRYFIVYRGQLSDD 205 (252)
T ss_pred HHHHHHHhhHHHHHHhhCCCCceEEEEEecchHHHHHHHHHHHhhhh-------hc---cCCHHHCceEEEEeCCcccHH
Confidence 3344445556777777777 89988887777765 555664432 22 122222333233322311112
Q ss_pred EEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHH
Q 002298 109 MKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKA 149 (940)
Q Consensus 109 ~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA 149 (940)
+++ ++-..+...|.|||||-.. -+-|.|++....|-..+
T Consensus 206 iRe-~Lgi~N~~~GYvyLVD~~g-rIRWagsG~At~~E~~~ 244 (252)
T PF05176_consen 206 IRE-ALGINNSYVGYVYLVDPNG-RIRWAGSGPATPEELES 244 (252)
T ss_pred HHH-HhCCCCCCcCeEEEECCCC-eEEeCccCCCCHHHHHH
Confidence 222 5667788899999999544 46799988765554433
Done!