Query 002298
Match_columns 940
No_of_seqs 379 out of 1338
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 20:40:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002298.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002298hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d0n_A Horse plasma gelsolin; 100.0 1E-158 4E-163 1443.4 70.1 671 1-695 38-727 (729)
2 3fg6_A Adseverin, scinderin; C 100.0 1.9E-85 6.7E-90 741.7 33.3 360 300-681 2-371 (371)
3 3fg7_A Villin-1; actin binding 100.0 2.7E-87 9.2E-92 761.7 12.4 361 314-692 28-393 (398)
4 2fh1_A Gelsolin; calcium, cont 100.0 3.8E-82 1.3E-86 710.1 35.2 335 343-695 1-342 (344)
5 1j72_A Macrophage capping prot 100.0 1.1E-75 3.8E-80 658.8 39.3 312 348-677 18-347 (347)
6 1j72_A Macrophage capping prot 100.0 3.1E-73 1.1E-77 638.9 37.7 293 1-302 44-347 (347)
7 1d0n_A Horse plasma gelsolin; 100.0 1.7E-71 5.9E-76 677.1 36.3 319 348-680 12-347 (729)
8 3fg6_A Adseverin, scinderin; C 100.0 8.2E-69 2.8E-73 606.0 33.5 283 1-304 77-369 (371)
9 3fg7_A Villin-1; actin binding 100.0 2.9E-70 1E-74 621.8 13.5 289 1-305 87-382 (398)
10 2fh1_A Gelsolin; calcium, cont 100.0 1.5E-67 5.1E-72 591.8 34.3 288 1-305 32-329 (344)
11 3tu5_B Gelsolin, protein cordo 100.0 5.1E-41 1.7E-45 365.2 15.5 246 350-609 34-292 (297)
12 3tu5_B Gelsolin, protein cordo 100.0 8.6E-40 2.9E-44 355.6 12.2 226 1-238 58-293 (297)
13 2vik_A Villin 14T; actin-bindi 100.0 1.2E-37 4.1E-42 298.8 11.2 121 338-459 5-126 (126)
14 3cip_G Gelsolin; actin, dictyo 100.0 1.9E-35 6.3E-40 284.4 14.6 111 348-458 17-128 (128)
15 1t44_G Chimera of gelsolin dom 100.0 2.8E-35 9.4E-40 289.5 15.3 116 348-463 14-130 (147)
16 2ff3_A Gelsolin; protein-prote 100.0 3E-35 1E-39 288.9 15.4 113 348-460 36-149 (150)
17 1t44_G Chimera of gelsolin dom 100.0 4.5E-30 1.5E-34 252.5 11.9 96 1-96 40-135 (147)
18 3cip_G Gelsolin; actin, dictyo 100.0 4.4E-29 1.5E-33 240.1 11.5 86 1-86 43-128 (128)
19 2ff3_A Gelsolin; protein-prote 100.0 5.2E-29 1.8E-33 244.6 12.0 89 1-89 62-150 (150)
20 2vik_A Villin 14T; actin-bindi 100.0 9.6E-29 3.3E-33 237.1 8.9 86 1-87 41-126 (126)
21 1svq_A Severin; actin-binding; 99.9 1.5E-27 5.2E-32 225.9 11.0 109 84-196 1-109 (114)
22 1kcq_A Gelsolin, brevin, ADF, 99.9 2.8E-25 9.4E-30 207.1 13.6 98 95-197 2-99 (104)
23 1qzp_A Dematin; villin headpie 99.9 2.2E-25 7.7E-30 189.0 4.6 64 877-940 2-68 (68)
24 1yu8_X Villin; alpha helix, 3- 99.9 5E-25 1.7E-29 185.4 6.2 65 876-940 2-67 (67)
25 2k6m_S Supervillin; SVHP, HP, 99.9 6.1E-25 2.1E-29 185.4 6.1 62 877-940 6-67 (67)
26 1ujs_A Actin-binding LIM prote 99.9 1.4E-24 4.8E-29 191.7 5.1 64 877-940 16-82 (88)
27 1kcq_A Gelsolin, brevin, ADF, 99.9 2.6E-22 8.7E-27 187.0 10.4 92 477-570 3-99 (104)
28 1svq_A Severin; actin-binding; 99.9 1.7E-22 5.8E-27 191.3 8.4 104 456-570 1-110 (114)
29 1und_A Advillin, P92; actin bi 99.7 4.7E-18 1.6E-22 126.4 3.2 37 904-940 1-37 (37)
30 1wy3_A Villin; structural prot 99.6 5.1E-17 1.7E-21 119.2 3.8 35 906-940 1-35 (35)
31 3eh2_A Protein transport prote 95.2 0.064 2.2E-06 65.8 11.2 111 578-696 619-758 (766)
32 1pcx_A Protein transport prote 95.1 0.046 1.6E-06 67.5 9.8 54 578-631 636-704 (810)
33 3eh1_A Protein transport prote 94.9 0.07 2.4E-06 65.3 10.5 110 578-696 600-746 (751)
34 3efo_B SEC24 related gene fami 94.4 0.11 3.6E-06 63.9 10.5 112 578-697 623-763 (770)
35 3eh2_A Protein transport prote 94.2 0.12 4.1E-06 63.4 10.2 80 210-291 620-729 (766)
36 1m2v_B SEC24, protein transpor 93.8 0.079 2.7E-06 66.1 7.5 53 578-630 752-819 (926)
37 3efo_B SEC24 related gene fami 92.6 0.27 9.3E-06 60.3 9.6 78 210-288 624-731 (770)
38 3eh1_A Protein transport prote 92.0 0.35 1.2E-05 59.1 9.6 31 228-258 631-661 (751)
39 2nut_A Protein transport prote 88.9 0.57 2E-05 57.5 7.6 46 578-627 623-668 (769)
40 1pcx_A Protein transport prote 88.5 0.58 2E-05 57.8 7.3 32 227-258 672-703 (810)
41 2nut_A Protein transport prote 88.3 0.72 2.4E-05 56.6 8.0 85 210-298 624-726 (769)
42 1m2o_A SEC23, protein transpor 87.7 0.92 3.1E-05 55.7 8.3 46 578-627 625-670 (768)
43 1m2o_A SEC23, protein transpor 87.3 1.3 4.5E-05 54.3 9.4 45 210-256 626-671 (768)
44 1m2v_B SEC24, protein transpor 86.0 0.88 3E-05 56.8 6.9 31 227-257 788-818 (926)
45 1x67_A Drebrin-like protein; c 63.7 17 0.00059 34.8 7.7 61 3-66 69-129 (146)
46 1x67_A Drebrin-like protein; c 55.5 28 0.00095 33.3 7.5 65 371-438 63-128 (146)
47 1cfy_A Cofilin; actin-binding, 50.8 35 0.0012 32.3 7.3 61 3-66 62-126 (143)
48 1m4j_A A6 gene product, twinfi 43.7 51 0.0017 31.2 7.3 64 2-66 65-128 (142)
49 1hqz_1 ABP1P, actin-binding pr 43.5 67 0.0023 30.2 8.1 58 371-428 58-117 (141)
50 2kvk_A Actin severing and dyna 41.7 43 0.0015 31.9 6.4 49 376-424 62-112 (144)
51 1hqz_1 ABP1P, actin-binding pr 41.1 65 0.0022 30.3 7.5 60 3-65 64-124 (141)
52 2vac_A Twinfilin-2; transferas 40.8 55 0.0019 30.6 6.9 63 3-66 63-125 (134)
53 1t3y_A Coactosin-like protein; 39.1 63 0.0021 30.7 7.1 60 370-429 49-111 (141)
54 1tvj_A Cofilin; ADF, actin bin 38.4 77 0.0026 30.9 7.8 63 2-67 79-143 (166)
55 1f7s_A Actin depolymerizing fa 33.7 50 0.0017 31.1 5.4 60 3-65 65-127 (139)
56 2i2q_A Cofilin; N-terminal ser 32.2 72 0.0025 29.8 6.2 62 3-67 62-125 (137)
57 1f7s_A Actin depolymerizing fa 31.9 1.1E+02 0.0037 28.7 7.4 57 371-427 59-119 (139)
58 1tvj_A Cofilin; ADF, actin bin 31.8 83 0.0028 30.7 6.8 65 372-439 75-142 (166)
59 2xfa_A Actin depolymerization 31.4 75 0.0026 30.2 6.3 58 3-63 72-132 (148)
60 1cnu_A Actophorin, ADF, cofili 29.9 1.3E+02 0.0044 28.0 7.6 54 374-427 57-113 (137)
61 1cfy_A Cofilin; actin-binding, 29.9 1.4E+02 0.0048 27.9 7.9 56 372-427 57-117 (143)
62 2i2q_A Cofilin; N-terminal ser 29.5 1.6E+02 0.0054 27.4 8.1 52 374-425 59-113 (137)
63 2kvk_A Actin severing and dyna 28.9 1E+02 0.0035 29.2 6.7 59 3-65 62-122 (144)
64 1cnu_A Actophorin, ADF, cofili 28.1 1.4E+02 0.0046 27.8 7.4 60 3-65 60-121 (137)
65 2xfa_A Actin depolymerization 26.7 1.7E+02 0.0059 27.6 7.9 57 373-429 68-128 (148)
66 2kd5_A ADF H, actin severing a 21.3 1E+02 0.0035 29.1 5.1 52 374-425 59-113 (144)
67 2kd5_A ADF H, actin severing a 20.7 45 0.0015 31.7 2.4 60 3-66 62-123 (144)
No 1
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=100.00 E-value=1.2e-158 Score=1443.39 Aligned_cols=671 Identities=32% Similarity=0.583 Sum_probs=609.1
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+||||||||||...++.+.|+||||+|++||+||+|+||++|||||++|||.||||||+||+||++||+||+++|+|++|
T Consensus 38 ~gdsYivL~t~~~~~~~~~~~i~~W~G~~ss~de~g~aA~~tveLd~~lgg~~vq~Re~Qg~Es~~Fl~~Fk~~i~~~~G 117 (729)
T 1d0n_A 38 TGDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKG 117 (729)
T ss_dssp TTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCEEEEEETTCCCHHHHHTCSSCEEEESC
T ss_pred CCCEEEEEEeccCCCCccceEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEecCCCCHHHHHhccCCcEEeeC
Confidence 69999999999777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccc-cceEEEEEecceeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhc
Q 002298 81 GVASGFRKTEEEE-FETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEK 159 (940)
Q Consensus 81 g~~sgf~~~e~~~-~~~rL~~vkGk~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~ 159 (940)
|++|||+|++++. ..+|||||||+++++++|||++++|||++||||||++++||||+|++||..||.||+++|+.|++.
T Consensus 118 g~~sgf~~v~~~~~~~~rL~~vkG~~~v~~~eV~~s~~SLns~DvFILd~g~~iy~W~G~~s~~~Er~kA~~~a~~i~~~ 197 (729)
T 1d0n_A 118 GVASGFKHVVPNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDN 197 (729)
T ss_dssp CTTTTCCCCCCSSCCCCEEEEEECSSSCEEEEECSSGGGCCSSSEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCcccccccCCCCcEEEEEECCCcEEEEEEeccHHHcCCCCeEEEEcCCEEEEEECCCCCHHHHHHHHHHHHHHhhh
Confidence 9999999998766 489999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCceEEEecCCCCCCCCChhhHHHHhCCCCCCCCCCCCccc-cccccCCCeEEEEe--CCeeEEEEc----cccccc
Q 002298 160 YHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDD-VIAETTPPKLYSIE--DSQVKIVEG----ELSKSM 232 (940)
Q Consensus 160 ~~~G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~-~~~~~~~~rLy~v~--~G~l~~~e~----~l~q~~ 232 (940)
+|+|+|+|.+|+||+ |+.+||++|||..+++.....+.. .......+|||+|+ +|++++.++ .|+|+|
T Consensus 198 er~g~~~i~~v~Eg~-----e~~eFw~~LGg~~~~~~~~~~~~~~~~~~~~~~rLy~vs~~~G~l~~~ev~~~~~~~q~~ 272 (729)
T 1d0n_A 198 ERSGRAQVSVFEEGA-----EPEAMLQVLGPKPTLPEATEDTVKEDAANRKLAKLYKVSNGAGPMVVSLVADENPFAQGA 272 (729)
T ss_dssp SGGGCSEEEEEETTC-----CCHHHHHHHCSCCCCCCCCGGGSCCCCCCCCCCEEEEEECSSSSCEEEEEESSSSBCGGG
T ss_pred hcCCCccEEEecCCC-----ChHHHHHHcCCCcccCCCCcchhhhhhccccCcEEEEEECCCCCEEEEEeccCCCCCHHH
Confidence 888999999999985 677999999999777644321111 12235678999998 689988776 499999
Q ss_pred cCCCceEEecCCc-e-EEEEEcCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEecCCCCChhhHhcccCCCCCCCCC--
Q 002298 233 LENNKCYLLDRGS-E-VFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYETYAFKSNFDSWPSGSTAP-- 308 (940)
Q Consensus 233 L~s~~vyILD~g~-e-IyVWiGk~as~~eRk~A~~~A~~yl~~~~Rp~~t~I~~V~eG~Ep~~FK~~F~~W~~~~~~~-- 308 (940)
|++++|||||||. + ||||+|++|+..||+.||.+|++|++..+||.||+|++|.||.||.+||++|.+|++...+.
T Consensus 273 L~~~dv~ILD~g~~~~ifVW~Gk~a~~~er~~A~~~A~~y~~~~~~p~~t~i~~V~eG~Ep~~Fk~~F~~W~~~~~~~~~ 352 (729)
T 1d0n_A 273 LRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQTEGL 352 (729)
T ss_dssp CCTTSEEEEEEGGGTEEEEEECTTSCHHHHTTHHHHHHHHHHHTTCCTTCEEEEEETTCCCHHHHTTBTTCCCTTCSSSS
T ss_pred cCCCCEEEEecCCccEEEEEECCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEeCCCCCHHHHHHHhcCCCccccccc
Confidence 9999999999994 4 99999999999999999999999999999999999999999999999999999999865432
Q ss_pred CCccchhhHHHHhhhccccccccCCCCCCCCCCCCcccCCccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCC
Q 002298 309 GAEEGRGKVAALLKQQGVGIKGMGKSTPTNEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGD 388 (940)
Q Consensus 309 ~~~~~rgkva~~~~~~~~dv~~l~~~~p~~~e~~~~~d~sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~ 388 (940)
+.....+++| .++++++|+..|+...+++++.+++|+++|+++||||+++++++||++.||+||+|||||||||| ..+
T Consensus 353 ~~~~~~~~~a-~~~~~~~d~~~l~~~p~~~~~~~~~d~g~g~l~vWrIe~~~~~~vp~~~~G~Fy~gd~Yivl~ty-~~~ 430 (729)
T 1d0n_A 353 GLAYLSSHIA-HVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRVEGSNKVPVDPATYGQFYGGDSYIILYNY-RHG 430 (729)
T ss_dssp SCSCCCGGGT-TCCCCCCCTTTGGGCHHHHHHHTCSSCSCSCEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEE-EET
T ss_pred cccccccccc-cccccccChHHhccCcccccccccccCCCCcEEEEEEeCCEEEECChhhccEEcCCcEEEEEEEE-ecC
Confidence 1222223454 36688999999865433566778899999999999999999999999999999999999999999 478
Q ss_pred CCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEEEeecCCCCHHHHhhcC-C-eEEEeCccccCCccccccCC
Q 002298 389 RKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQ-P-MVVVKGGLCSGYKKSLADKG 466 (940)
Q Consensus 389 ~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~Rv~QGkEp~~Fl~iF~-~-~ii~~GG~ss~~~~~~~e~~ 466 (940)
++.+|+||||||++|+++|+++||++|++|++.++|.|+|+||+||+||+|||+||+ + |||++||+++. +
T Consensus 431 g~~~~~iyfW~G~~ss~de~g~aa~~~veLd~~lgg~~vq~R~~Qg~E~~~Fl~~F~g~~~ii~~Gg~~~~--~------ 502 (729)
T 1d0n_A 431 SRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIVYKGGTSRE--G------ 502 (729)
T ss_dssp TEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTSCSEEEEEETTCCCHHHHTTSTTSCEEEESSCCCSS--C------
T ss_pred CCceEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCceEEecccCCCCHHHHHhcCCCeEEEEeCCcccc--C------
Confidence 899999999999999999999999999999999999999999999999999999998 5 89999998752 1
Q ss_pred CCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCCcEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCCceEE
Q 002298 467 LTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPGVAIK 546 (940)
Q Consensus 467 ~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~~~~~~ 546 (940)
..+....+|||||+|+.+.+++++||++.++||||+|||||+++++||+|+|++|+.+||++|+.+|+.|.. +++
T Consensus 503 ---~~~~~~~~rLf~vrg~~~~~~~~~eV~~~~ssLns~d~fIL~~~~~iyvW~G~~s~~~er~~A~~~a~~l~~--~~~ 577 (729)
T 1d0n_A 503 ---GQTAPASTRLFQVRASSSGATRAVEIIPKAGALNSNDAFVLKTPSAAYLWVGAGASEAEKTGAQELLRVLRA--QPV 577 (729)
T ss_dssp ---CCCCCCSSEEEEEEECTTSCEEEEEECCCGGGCCSSSEEEEECSSCCBCEECTTCCHHHHHHHHHHHHHHTC--CCC
T ss_pred ---ccCCCCCCEEEEEECCCCCceEEEEecCChhhcCcCCeEEEecCCeEEEEECCCCCHHHHHHHHHHHHHhcc--CcE
Confidence 112334689999999988899999999999999999999999999999999999999999999999999984 478
Q ss_pred ecccCCcccccccccCCcccCCCCCCC-CC--CCCCCeeEEEEecCCeeeEEeec-ccCccCCCCCCEEEEeCCCEEEEE
Q 002298 547 HAKEGTESSAFWFPLGGKQSYTSKKVS-PE--IVRDPHLFTFSFNKGKFEVEEVY-NFSQDDLLTEDILILDTHAEVFVW 622 (940)
Q Consensus 547 ~v~EG~E~~~FW~~LGGk~~y~~~~~~-~~--~~~~prLF~~S~~~G~~~v~EI~-~F~QdDL~~ddv~ILD~~~eIfVW 622 (940)
+|+||+||++||.+|||+.+|++.... .+ ....||||+||+.+|+|.++||. +|+|+||+++|||||||+++||||
T Consensus 578 ~v~EG~E~~~FW~~LGg~~~y~~~~~~~~~~~~~~~~rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv~iLD~~~eifvW 657 (729)
T 1d0n_A 578 QVAEGSEPDSFWEALGGKATYRTSPRLKDKKMDAHPPRLFACSNKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVW 657 (729)
T ss_dssp CEETTCCCHHHHHTTTSCCCCCCCCCCSTTHHHHSCCEEEEEECTTTCCEEEECCSSCCGGGCCTTSEEEEECSSCEEEE
T ss_pred EEeCCCChHHHHHhcCCCCccCcccccccccccccCCeEEEEEcCCCcEEEEEecCcccHhHCCCCCEEEEeCCCEEEEE
Confidence 899999999999999999999987654 22 15789999999999999999999 999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCcEEEecCCCCCcccccccc-cCCCCccccCccHHHHHHHH
Q 002298 623 VGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQKKVALL 695 (940)
Q Consensus 623 iG~~a~~~ek~~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~ 695 (940)
||+.|+..||+.||.+|++|+++++. +|++.+||++|.+|.||+.||++|+ ||+.+|. +++|+++.+.|
T Consensus 658 iG~~a~~~er~~al~~A~~Y~~~~~~--~r~~~~pi~~V~~G~Ep~~F~~~F~~Wd~~~~~--~~~~~~~~~~~ 727 (729)
T 1d0n_A 658 VGKDSQDEEKTEALTSAKRYIDTDPA--HRDRRTPITVVKQGFEPPSFVGWFLGWDDSYWS--VDPLDRALAEL 727 (729)
T ss_dssp ECTTSCHHHHSSHHHHHHHHHHHCTT--CCCTTCCEEEEETTCCCHHHHTTCTTCCGGGGT--SCHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHHHHhCcc--cCCCCCcEEEEeCCCCCHHHHhhhhhcCccccC--CccHHHHHHhh
Confidence 99999999999999999999999776 6788899999999999999999999 9999975 57899998776
No 2
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-85 Score=741.70 Aligned_cols=360 Identities=29% Similarity=0.577 Sum_probs=274.4
Q ss_pred CCCCCCCCC--CCccchhhHHHHhhhccccccccCCCCC-CCCCCCCcccCCccEEEEEEeCCceeeCCCCccceeeeCc
Q 002298 300 SWPSGSTAP--GAEEGRGKVAALLKQQGVGIKGMGKSTP-TNEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGD 376 (940)
Q Consensus 300 ~W~~~~~~~--~~~~~rgkva~~~~~~~~dv~~l~~~~p-~~~e~~~~~d~sg~l~VWrIe~~~~~~v~~~~~G~FysgD 376 (940)
+|.+..++. +.....+++|++ .+.++|+..| |.+| ++++.+|+|||+|+|+||||+++++++||++.||+||+||
T Consensus 2 ~w~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l-~~~~~~~~~~~~~d~g~g~l~vWrIe~~~~~~vp~~~~G~Fy~gD 79 (371)
T 3fg6_A 2 DWRDKDQSDGFGKVYVTEKVAQI-KQIPFDASKL-HSSPQMAAQHNMVDDGSGKVEIWRVENNGRIQVDQNSYGEFYGGD 79 (371)
T ss_dssp ----------------------------------------------------CEEEEEEECSSSEEECCGGGTTEECTTC
T ss_pred CCccccccccCCccccccccccc-cccccChhhc-cCCccchhhccCccCCCCcEEEEEEECCeeeeCChHHcCeEecCc
Confidence 687665443 233445567664 4789999998 5566 6888999999999999999999999999999999999999
Q ss_pred EEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEEEeecCCCCHHHHhhcC-C-eEEEeCcc
Q 002298 377 CYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQ-P-MVVVKGGL 454 (940)
Q Consensus 377 cYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~Rv~QGkEp~~Fl~iF~-~-~ii~~GG~ 454 (940)
|||||||| +..|+||||+|++|+++|+++||++|++||+.++|+|+|+||+||+||++||+||+ + |||++||.
T Consensus 80 ~YIvl~ty-----~~~~~i~~W~G~~ss~de~g~aa~~~v~Ld~~lgg~~vq~R~~QG~Es~~Fls~Fkg~~~ii~~Gg~ 154 (371)
T 3fg6_A 80 CYIILYTY-----PRGQIIYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYKNGT 154 (371)
T ss_dssp EEEEEEEC-----SSCEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCEEEEEETTCCCHHHHTTSCSSCEEEC----
T ss_pred eEEEEEEe-----cCCeEEEEeeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEecCCCcHHHHHHhCCceEEEEcCCc
Confidence 99999999 34699999999999999999999999999999999999999999999999999999 4 78999998
Q ss_pred ccCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCCcEEeeeC-CeEEEEECCCCCHHHHHHHH
Q 002298 455 CSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSG-STMFTWHGNQSTFEQQQLAA 533 (940)
Q Consensus 455 ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d~FIL~~~-~~vyvW~G~~ss~~er~~A~ 533 (940)
++.+.+. ....+|||||+|+.+.+++++||++.++||||+|||||+++ +.||+|+|++|+.+||.+|+
T Consensus 155 ~~~~~~~-----------~~~~~rL~~vrg~~~~~vr~~EV~~~~ssLns~d~FILd~~~~~iyvW~G~~ss~~Er~~A~ 223 (371)
T 3fg6_A 155 SKKGGQA-----------PAPPTRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAE 223 (371)
T ss_dssp ---------------------CCEEEEEECCSSSCCEEEEECSSGGGCBTTSEEEEECTTSEEEEEECTTCCHHHHHHHH
T ss_pred cCCCccC-----------CcCccEEEEEeccCCCceEEEEecCCHHHccCCCeEEEEcCCCeEEEEECCCCCHHHHHHHH
Confidence 7654321 12357999999998889999999999999999999999999 99999999999999999999
Q ss_pred HHHHHhCCCceEEecccCCcccccccccCCcccCCCCCCCCCC--CCCCeeEEEEecCCeeeEEeec-ccCccCCCCCCE
Q 002298 534 KVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSPEI--VRDPHLFTFSFNKGKFEVEEVY-NFSQDDLLTEDI 610 (940)
Q Consensus 534 ~va~~l~~~~~~~~v~EG~E~~~FW~~LGGk~~y~~~~~~~~~--~~~prLF~~S~~~G~~~v~EI~-~F~QdDL~~ddv 610 (940)
.+|..|+. ..++|+||+||++||.+|||+.+|++.....+. ...||||+||+.+|.|.++||. +|+|+||+++||
T Consensus 224 ~~a~~i~~--~~~~v~EG~Ep~~Fw~~LGg~~~~~~~~~~~~~~~~~~~rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv 301 (371)
T 3fg6_A 224 YVASVLKC--KTLRIQEGEEPEEFWNSLGGKKDYQTSPLLETQAEDHPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDV 301 (371)
T ss_dssp HHHHHTTC--EEEEEETTCCCHHHHHHTTSCCCCBCCTTTSSCCCSSCCEEEEEECTTSSCEEEECCSSCCGGGSCTTSE
T ss_pred HHHHHhcC--CeEEEeCCCCCHHHHHHcCCCcccCcchhhcccccccCcEEEEEEcCCCcEEEEEecccccHhHCCCCCE
Confidence 99999975 347799999999999999999999876554432 3679999999999999999998 999999999999
Q ss_pred EEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCcEEEecCCCCCcccccccc-cCCCCc
Q 002298 611 LILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCFCTTFFS-WDPTKA 681 (940)
Q Consensus 611 ~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~ 681 (940)
|||||+.+||||+|+.|+..||+.||.+|++||++++. +|++.|||++|.+|.||+.||++|. ||+.+|
T Consensus 302 ~ILD~~~~IfVW~G~~as~~Er~~A~~~A~~yi~~~~~--~r~~~t~i~~v~eG~Ep~~Fk~~F~~W~~~~~ 371 (371)
T 3fg6_A 302 MLLDAWEQIFIWIGKDANEVEKKESLKSAKMYLETDPS--GRDKRTPIVIIKQGHEPPTFTGWFLGWDSSKW 371 (371)
T ss_dssp EEEECSSCEEEEECTTCCHHHHHHHHHHHTTCC------------CCEEEEETTCCCHHHHTTSSSCCTTCC
T ss_pred EEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcc--CCCCCCCEEEecCCCCCHHHHhhhccCCcccC
Confidence 99999999999999999999999999999999999875 6788999999999999999999998 999887
No 3
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=100.00 E-value=2.7e-87 Score=761.65 Aligned_cols=361 Identities=32% Similarity=0.593 Sum_probs=99.9
Q ss_pred hhhHHHHhhhccccccccCCCCC-CCCCCCCcccCCccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcc
Q 002298 314 RGKVAALLKQQGVGIKGMGKSTP-TNEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKED 392 (940)
Q Consensus 314 rgkva~~~~~~~~dv~~l~~~~p-~~~e~~~~~d~sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~ 392 (940)
.+++|+ ..+.++|+..| +++| ++++.+|+||++|+|+||||+++++++||++.||+||+||||||||||. .+++.+
T Consensus 28 ~~~~ak-~~~~~~d~~~l-~~~~~~aa~~~~~dd~~g~l~iWrIe~~~~~~vp~~~~G~Fy~gD~YIvl~ty~-~~g~~~ 104 (398)
T 3fg7_A 28 VGSVAK-VEQVKFDATSM-HVKPQVAAQQKMVDDGSGEVQVWRIENLELVPVDSKWLGHFYGGDCYLLLYTYL-IGEKQH 104 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceee-ccccccchhhh-hcChhHHHHhcCCCCCCCcEEEEEEeCCEEEECChHhcCeecCCCeEEEEEEEe-cCCcce
Confidence 456665 34679999998 4677 4778889999999999999999999999999999999999999999994 778899
Q ss_pred eEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCcc
Q 002298 393 YFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDET 471 (940)
Q Consensus 393 ~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~~~~~~e~~~~~~~ 471 (940)
|+||||+|++|++||+++||++|++||+.|+|.|+|+||+||+||++||+||+ +|||++||+++... +
T Consensus 105 ~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~Re~QG~Es~~Fls~Fkg~iii~~Gg~~~~~~-----------~ 173 (398)
T 3fg7_A 105 YLLYVWQGSQASQDEITASAYQAVILDQKYNGEPVQIRVPMGKEPPHLMSIFKGRMVVYQGGTSRTNN-----------L 173 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeecCCCCHHHHHHhCCeEEEeeCCcccCCc-----------c
Confidence 99999999999999999999999999999999999999999999999999999 58899999874211 1
Q ss_pred ccCCceeEEEEEecCCCCceEEEeccCcCCCCCCCcEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCCceEEecccC
Q 002298 472 YTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPGVAIKHAKEG 551 (940)
Q Consensus 472 ~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~~~~~~~v~EG 551 (940)
.....+|||||+|+.+.+++++||++.++||||+|||||++++.||+|+|++|+.+||.+|+.+|..|+. .++++|+||
T Consensus 174 ~~~~~~rLf~VrG~~~~~~ra~EV~~s~sSLns~d~FILd~~~~iyvW~G~~ss~~Er~~A~~va~~i~~-~~~~~v~EG 252 (398)
T 3fg7_A 174 ETGPSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGCSGDEREMAKMVADTISR-TEKQVVVEG 252 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCcEEEEEECCCCCceEEEEecCCHHHccCCceEEEEeCCeEEEEeCCCCCHHHHHHHHHHHHHhcC-CcEEEEeCC
Confidence 1234579999999987899999999999999999999999999999999999999999999999999964 577889999
Q ss_pred CcccccccccCCcccCCCCCCCCC--CCCCCeeEEEEecCCeeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCH
Q 002298 552 TESSAFWFPLGGKQSYTSKKVSPE--IVRDPHLFTFSFNKGKFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDS 629 (940)
Q Consensus 552 ~E~~~FW~~LGGk~~y~~~~~~~~--~~~~prLF~~S~~~G~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~ 629 (940)
+||++||.+|||+.+|++.....+ ....||||+||+.+|.|.++||.+|+|+||+++|||||||+.+||||+|+.|+.
T Consensus 253 ~Ep~~Fw~~LGg~~~~~~~~~~~~~~~~~~~rLf~~s~~~G~~~v~EV~~f~Q~dL~~~dv~ILD~g~~IfVW~G~~as~ 332 (398)
T 3fg7_A 253 QEPANFWMALGGKAPYANTKRLQEENLVITPRLFECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANE 332 (398)
T ss_dssp -------------------------CCCCCCEEEEEECTTSSCEEEECTTCCGGGCCTTSEEEEECSSCEEEEECTTCCH
T ss_pred CCchhHHHHhCCCccCCChhhhccchhcccCeeEEEEcCCCCEEEEEecccCHHHCCCCCEEEEeCCCEEEEEECCCCCH
Confidence 999999999999999987655433 246899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCcEEEecCCCCCcccccccc-cCCCCccccCccHHHHH
Q 002298 630 KEKQSAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQKKV 692 (940)
Q Consensus 630 ~ek~~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~ 692 (940)
.||+.||.+|++||++++. +|++.|||.+|.+|.||+.||++|. ||+.+|.+ +.||+++.
T Consensus 333 ~Er~~Al~~A~~yi~~~~~--~r~~~tpi~~V~eG~Ep~~Fk~~F~~Wd~~~~~~-~~~~~~~~ 393 (398)
T 3fg7_A 333 EEKKAAATTAQEYLKTHPS--GRDPETPIIVVKQGHEPPTFTGWFLAWDPFKWSG-IHVVPNLS 393 (398)
T ss_dssp HHHHHHHHHHHHHHHHSSS--SCCTTCCEEEEETTCCCHHHHTTSSCCCTTCC-----------
T ss_pred HHHHHHHHHHHHHHHhCcc--cCCCCCCEEEEcCCCCCHHHHHhhhcCChhhhcc-cCCHHHhh
Confidence 9999999999999999876 6788999999999999999999998 99999994 99999874
No 4
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=100.00 E-value=3.8e-82 Score=710.13 Aligned_cols=335 Identities=30% Similarity=0.566 Sum_probs=291.4
Q ss_pred CcccCCccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhc
Q 002298 343 PLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSL 422 (940)
Q Consensus 343 ~~~d~sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l 422 (940)
|+|||+|+++||||+++++++||++.||+||+||||||||||. ..++.+|+||||+|++|+++|+++||+++++|++.+
T Consensus 1 ~~ddg~g~~~vwrIe~~~~~~v~~~~~G~Fy~gD~YIvl~ty~-~~~~~~~~i~~W~G~~ss~de~~~aa~~~~~ld~~l 79 (344)
T 2fh1_A 1 MDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNYR-HGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEEL 79 (344)
T ss_dssp CCSCSCSEEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEE-ETTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCEEEEEEcCCeEEECCHHHcCeecCCCeEEEEEEee-cCCCceEEEEEEecCCCCHhHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999999995 667789999999999999999999999999999999
Q ss_pred CCCCeEEEeecCCCCHHHHhhcCC--eEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcC
Q 002298 423 KGRPVQGRIFQGREPPQFVALFQP--MVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVAT 500 (940)
Q Consensus 423 ~g~~vq~Rv~QGkEp~~Fl~iF~~--~ii~~GG~ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~as 500 (940)
+|.|+|+||+||+||+|||++|++ +||++||.+..+.. . ....+|||||+|+.+.+++++||++.++
T Consensus 80 gg~~vq~R~~Qg~Es~~Fl~~F~g~~~ii~~gg~~~~~~~--------~---~~~~~rL~~v~g~~~~~~~~~eV~~~~s 148 (344)
T 2fh1_A 80 GGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSREGGQ--------T---APASTRLFQVRANSAGATRAVEVLPKAG 148 (344)
T ss_dssp TSCSEEEEEETTCCCHHHHGGGTTCCEEEESCCCCTTTCS--------C---CCCSSEEEEEEECTTCCEEEEEECCSGG
T ss_pred CCCceEEEeecCCCCHHHHHhhCCCeEEEEcCCcccCCcc--------C---CCCCceEEEEECCCCCceEEEEecCchh
Confidence 999999999999999999999996 78899986532211 0 1235799999998888999999999999
Q ss_pred CCCCCCcEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCCCceEEecccCCcccccccccCCcccCCCCCCCC---CCC
Q 002298 501 SLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKPGVAIKHAKEGTESSAFWFPLGGKQSYTSKKVSP---EIV 577 (940)
Q Consensus 501 SLnS~d~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~~~~~~~v~EG~E~~~FW~~LGGk~~y~~~~~~~---~~~ 577 (940)
||||+|||||++++.||+|+|++|+.+||.+|..+|..|+ .++.+|+||+||++||.+|||+.+|+...... ...
T Consensus 149 sLns~d~FIL~~~~~iyvW~G~~s~~~er~~A~~~a~~l~--~~i~~v~EG~E~~~Fw~~LGg~~~y~~~~~~~~~~~~~ 226 (344)
T 2fh1_A 149 ALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVLR--AQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMDA 226 (344)
T ss_dssp GCBTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHTT--CCCEEEETTCCCHHHHHHTTSCCCCBCCHHHHCSCC--
T ss_pred hcCCCceEEEecCCEEEEEECCCCCHHHHHHHHHHHHHhC--CCcEEEeCCCCcHHHHHhcCCCCccccccccccccccc
Confidence 9999999999999999999999999999999999999995 56788999999999999999999888653321 224
Q ss_pred CCCeeEEEEecCCeeeEEeec-ccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 002298 578 RDPHLFTFSFNKGKFEVEEVY-NFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEGLSPKV 656 (940)
Q Consensus 578 ~~prLF~~S~~~G~~~v~EI~-~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~r~~~~ 656 (940)
..||||+||+.+|+|.++||. +|+|+||+++|||||||+.+||||+|+.|+..||+.||.+|++|+++.+. +|++.+
T Consensus 227 ~~~rLf~~s~~~G~~~v~ev~~~f~q~dL~~~dv~iLD~g~~IfVW~G~~as~~er~~A~~~A~~y~~~~~~--~r~~~t 304 (344)
T 2fh1_A 227 HPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPA--NRDRRT 304 (344)
T ss_dssp CCCEEEEEECTTSSCEEEEECSSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHTC---------C
T ss_pred cCCEEEEEEcCCCCEEEEEccCCcCHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcc--CCCCCC
Confidence 789999999999999999998 99999999999999999999999999999999999999999999998765 678899
Q ss_pred cEEEecCCCCCcccccccc-cCCCCccccCccHHHHHHHH
Q 002298 657 PLYKVTEGNEPCFCTTFFS-WDPTKATVQGNSFQKKVALL 695 (940)
Q Consensus 657 pI~~V~qG~EP~~Ft~~F~-Wd~~k~~~~~~s~~~~~~~~ 695 (940)
||++|.+|.||+.||++|. |++.+|. +++|++++++|
T Consensus 305 ~i~~V~eG~Ep~~Fk~~F~~W~~~~~~--~~~~~~~~~~~ 342 (344)
T 2fh1_A 305 PITVVKQGFEPPSFVGWFLGWDDDYWS--VDPLDRAMAEL 342 (344)
T ss_dssp CEEEEETTCCCHHHHTTSSSCCTTCC--------------
T ss_pred cEEEEcCCCCCHHHHHHHhhcChhhcC--CChHHHHHHHh
Confidence 9999999999999999999 9999986 58899998876
No 5
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=100.00 E-value=1.1e-75 Score=658.83 Aligned_cols=312 Identities=25% Similarity=0.501 Sum_probs=285.8
Q ss_pred CccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 348 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 348 sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
+..++||||+++++++||++.||+||+||||||||||. ..+ |+||||+|++|++||+++||++|++|++.|+|.|+
T Consensus 18 ~~g~~iWrie~~~~~~vp~~~~G~Fy~gd~Yivl~t~~-~~~---~~i~~W~G~~ss~de~~~aa~~t~~ld~~lgg~~v 93 (347)
T 1j72_A 18 DPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGP-EEV---SHLHLWIGQQSSRDEQGACAVLAVQLDDYLGGRPV 93 (347)
T ss_dssp SSEEEEEEECSSSEEECCTTTTTEEETTSEEEEEEECS-SSC---EEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCSE
T ss_pred CCCeEEEEEcCCEEEECCHHHcCeecCCCEEEEEEeec-CCC---eEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCCc
Confidence 45799999999999999999999999999999999994 332 99999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCC
Q 002298 428 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSE 506 (940)
Q Consensus 428 q~Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d 506 (940)
|+|++||+||+|||++|+ +++|++||++++|+++..+ ....+|||||+|+ .+++++||++.++||||+|
T Consensus 94 q~R~~Qg~Es~~Fl~~F~~~~~i~~Gg~~sgf~~~~~~--------~~~~~rL~~v~G~--~~v~~~eV~~~~~sLns~d 163 (347)
T 1j72_A 94 QHREVQGNESDLFMSYFPRGLKYQEGGVESGFKHVVPN--------EVVVQRLYQVKGK--KNIRATERALNWDSFNTGD 163 (347)
T ss_dssp EEEEETTSCCHHHHTTCSSCCEEECSSCCTTCCCCCCC--------CCEEEEEEEEECS--SSCEEEEECSSGGGCBTTS
T ss_pred EEEeeCCCCCHHHHHhhCCCeEEeeCCccccccccccC--------CCCCcEEEEEECC--CceEEEEEeeeHHHcCCCc
Confidence 999999999999999999 5999999999999876421 1124799999996 5899999999999999999
Q ss_pred cEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCC-----CceEEecccCCcccccccccCCcccCCCCCCC------CC
Q 002298 507 CFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKP-----GVAIKHAKEGTESSAFWFPLGGKQSYTSKKVS------PE 575 (940)
Q Consensus 507 ~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~-----~~~~~~v~EG~E~~~FW~~LGGk~~y~~~~~~------~~ 575 (940)
||||++++.||+|+|++|+.+||.+|+.+|..|+. ..++++|.||+||++||.+|||+..|+..... ..
T Consensus 164 ~FIL~~~~~iy~W~G~~s~~~Er~~A~~~a~~i~~~~~~g~~~v~~v~EG~E~~~Fw~~LGg~~~~~~~~~~~d~~~~~~ 243 (347)
T 1j72_A 164 CFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIVTDGEEPAEMIQVLGPKPALKEGNPEEDLTADKA 243 (347)
T ss_dssp EEEEEETTEEEEEECTTCCHHHHHHHHHHHHHHHTTSCCSSCEEEEEETTCCCHHHHHHHCSCCCCBCSCCSSCCTTSSS
T ss_pred eEEEecCCEEEEEECCCCCHHHHHHHHHHHHHHHhhccCCCceEEEEeCCCCHHHHHHHhCCCcccccCCcchhhhhhhh
Confidence 99999999999999999999999999999999962 35688999999999999999999888765431 12
Q ss_pred CCCCCeeEEEEecCCeeeEEee---cccCccCCCCCCEEEEeCC--CEEEEEEcCCCCHHHHHHHHHHHHHHHHhhcccc
Q 002298 576 IVRDPHLFTFSFNKGKFEVEEV---YNFSQDDLLTEDILILDTH--AEVFVWVGQSVDSKEKQSAFEFGQNYIDMATSLE 650 (940)
Q Consensus 576 ~~~~prLF~~S~~~G~~~v~EI---~~F~QdDL~~ddv~ILD~~--~eIfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~ 650 (940)
....||||+|++.+|++.++|| .+|+|+||+++||||||++ .+||||+|+.|+..||+.|+.+|++|++..
T Consensus 244 ~~~~~rLy~vs~~~G~~~v~ev~~~~~~~q~~L~s~dv~ILD~g~~~~IyVW~G~~a~~~er~~A~~~A~~y~~~~---- 319 (347)
T 1j72_A 244 NAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKERQAALQVAEGFISRM---- 319 (347)
T ss_dssp SSCCCEEEEEECTTSSCEEEEEECSSSBCGGGCCTTSEEEEECGGGSEEEEEECTTCCHHHHHHHHHHHHHHHHHH----
T ss_pred cccCCEEEEEECCCCCEEEEeeccCCCCCHHHcCCCCEEEEecCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHhc----
Confidence 2368999999999999999999 5999999999999999999 999999999999999999999999999985
Q ss_pred CCCCCCcEEEecCCCCCcccccccc-cC
Q 002298 651 GLSPKVPLYKVTEGNEPCFCTTFFS-WD 677 (940)
Q Consensus 651 ~r~~~~pI~~V~qG~EP~~Ft~~F~-Wd 677 (940)
+|++.+||.+|.+|.||..|+.+|. |+
T Consensus 320 ~rp~~~~i~~v~eG~Ep~~Fk~~F~~W~ 347 (347)
T 1j72_A 320 QYAPNTQVEILPQGRESPIFKQFFKDWK 347 (347)
T ss_dssp TCCTTCEEEEEETTCCCTTTCCBSTTCC
T ss_pred CCCCCCeEEEEcCCCCCHHHHHHhhcCC
Confidence 6788999999999999999999999 96
No 6
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=100.00 E-value=3.1e-73 Score=638.92 Aligned_cols=293 Identities=36% Similarity=0.636 Sum_probs=270.6
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+||||||||||...+ |+||||+|++||+||+|+||++|++||++|||.|+||||+||+||++||+||+++|+|++|
T Consensus 44 ~gd~Yivl~t~~~~~----~~i~~W~G~~ss~de~~~aa~~t~~ld~~lgg~~vq~R~~Qg~Es~~Fl~~F~~~~~i~~G 119 (347)
T 1j72_A 44 SGDSYLVLHNGPEEV----SHLHLWIGQQSSRDEQGACAVLAVQLDDYLGGRPVQHREVQGNESDLFMSYFPRGLKYQEG 119 (347)
T ss_dssp TTSEEEEEEECSSSC----EEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTCSEEEEEETTSCCHHHHTTCSSCCEEECS
T ss_pred CCCEEEEEEeecCCC----eEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEeeCCCCCHHHHHhhCCCeEEeeC
Confidence 699999999996432 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccc-cceEEEEEecceeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhc
Q 002298 81 GVASGFRKTEEEE-FETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEK 159 (940)
Q Consensus 81 g~~sgf~~~e~~~-~~~rL~~vkGk~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~ 159 (940)
|+++||+|++++. ..+|||||||+++++++|||++++|||++||||||++++||+|+|++||..||.+|+++|+.|++.
T Consensus 120 g~~sgf~~~~~~~~~~~rL~~v~G~~~v~~~eV~~~~~sLns~d~FIL~~~~~iy~W~G~~s~~~Er~~A~~~a~~i~~~ 199 (347)
T 1j72_A 120 GVESGFKHVVPNEVVVQRLYQVKGKKNIRATERALNWDSFNTGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDS 199 (347)
T ss_dssp SCCTTCCCCCCCCCEEEEEEEEECSSSCEEEEECSSGGGCBTTSEEEEEETTEEEEEECTTCCHHHHHHHHHHHHHHHTT
T ss_pred CccccccccccCCCCCcEEEEEECCCceEEEEEeeeHHHcCCCceEEEecCCEEEEEECCCCCHHHHHHHHHHHHHHHhh
Confidence 9999999998654 579999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCceEEEecCCCCCCCCChhhHHHHhCCCCCCCCCCCCccc--cccccCCCeEEEEe--CCeeEEEEc----ccccc
Q 002298 160 YHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDD--VIAETTPPKLYSIE--DSQVKIVEG----ELSKS 231 (940)
Q Consensus 160 ~~~G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~--~~~~~~~~rLy~v~--~G~l~~~e~----~l~q~ 231 (940)
++.|+++|.+|+||+ |+.+||.+|||..+++.....++. .......+|||+|+ +|++.+.|+ .|+|+
T Consensus 200 ~~~g~~~v~~v~EG~-----E~~~Fw~~LGg~~~~~~~~~~~d~~~~~~~~~~~rLy~vs~~~G~~~v~ev~~~~~~~q~ 274 (347)
T 1j72_A 200 ERQGKAQVEIVTDGE-----EPAEMIQVLGPKPALKEGNPEEDLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALE 274 (347)
T ss_dssp SCCSSCEEEEEETTC-----CCHHHHHHHCSCCCCBCSCCSSCCTTSSSSSCCCEEEEEECTTSSCEEEEEECSSSBCGG
T ss_pred ccCCCceEEEEeCCC-----CHHHHHHHhCCCcccccCCcchhhhhhhhcccCCEEEEEECCCCCEEEEeeccCCCCCHH
Confidence 898999999999984 778999999998777655432221 11234679999997 689988887 49999
Q ss_pred ccCCCceEEecCC--ceEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEecCCCCChhhHhcccCCC
Q 002298 232 MLENNKCYLLDRG--SEVFVWVGRVTQVEERKAASQAAEEFISSQNRPKSIRITRVIQGYETYAFKSNFDSWP 302 (940)
Q Consensus 232 ~L~s~~vyILD~g--~eIyVWiGk~as~~eRk~A~~~A~~yl~~~~Rp~~t~I~~V~eG~Ep~~FK~~F~~W~ 302 (940)
||++++||||||| ++||||+|++|+..||+.||.+|++|++..+||.+++|.+|.||.||.+||++|.+|+
T Consensus 275 ~L~s~dv~ILD~g~~~~IyVW~G~~a~~~er~~A~~~A~~y~~~~~rp~~~~i~~v~eG~Ep~~Fk~~F~~W~ 347 (347)
T 1j72_A 275 LLISDDCFVLDNGLCGKIYIWKGRKANEKERQAALQVAEGFISRMQYAPNTQVEILPQGRESPIFKQFFKDWK 347 (347)
T ss_dssp GCCTTSEEEEECGGGSEEEEEECTTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEEEETTCCCTTTCCBSTTCC
T ss_pred HcCCCCEEEEecCCCcEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCCeEEEEcCCCCCHHHHHHhhcCC
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999999996
No 7
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=100.00 E-value=1.7e-71 Score=677.13 Aligned_cols=319 Identities=25% Similarity=0.473 Sum_probs=290.9
Q ss_pred CccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 348 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 348 sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
...++||||+++++++||++.||+||+||||||||||+..+++.+|+||||+|++||+||+|+||++|++||+.|+|.||
T Consensus 12 ~~g~~iWrIe~~~~~~v~~~~~G~Fy~gdsYivL~t~~~~~~~~~~~i~~W~G~~ss~de~g~aA~~tveLd~~lgg~~v 91 (729)
T 1d0n_A 12 EPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 91 (729)
T ss_dssp SSEEEEEEECSSSEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCeEEEEEcCCEEEeCChHhcCcccCCCEEEEEEeccCCCCccceEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCcce
Confidence 56899999999999999999999999999999999996456778999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCC
Q 002298 428 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSE 506 (940)
Q Consensus 428 q~Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d 506 (940)
|+|++||+||+|||+||+ +++|++||++++|+|+..+ .| ..+|||||+|+ .+++++||++.++||||+|
T Consensus 92 q~Re~Qg~Es~~Fl~~Fk~~i~~~~Gg~~sgf~~v~~~------~~--~~~rL~~vkG~--~~v~~~eV~~s~~SLns~D 161 (729)
T 1d0n_A 92 QHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVVPN------EV--VVQRLLQVKGR--RVVRATEVPVSWESFNNGD 161 (729)
T ss_dssp EEEEETTCCCHHHHHTCSSCEEEESCCTTTTCCCCCCS------SC--CCCEEEEEECS--SSCEEEEECSSGGGCCSSS
T ss_pred EEEEecCCCCHHHHHhccCCcEEeeCCcccCccccccc------CC--CCcEEEEEECC--CcEEEEEEeccHHHcCCCC
Confidence 999999999999999998 5999999999999986321 11 35799999996 4899999999999999999
Q ss_pred cEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCC-----CceEEecccCCcccccccccCCcccCCCCCCC-----CCC
Q 002298 507 CFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKP-----GVAIKHAKEGTESSAFWFPLGGKQSYTSKKVS-----PEI 576 (940)
Q Consensus 507 ~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~-----~~~~~~v~EG~E~~~FW~~LGGk~~y~~~~~~-----~~~ 576 (940)
||||++++.||+|+|++|+..||.+|..+|..|+. ..++.+|+||.|+++||++|||+.+|+..... ...
T Consensus 162 vFILd~g~~iy~W~G~~s~~~Er~kA~~~a~~i~~~er~g~~~i~~v~Eg~e~~eFw~~LGg~~~~~~~~~~~~~~~~~~ 241 (729)
T 1d0n_A 162 CFILDLGNNIYQWCGSKSNRFERLKATQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVLGPKPTLPEATEDTVKEDAAN 241 (729)
T ss_dssp EEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHSGGGCSEEEEEETTCCCHHHHHHHCSCCCCCCCCGGGSCCCCCC
T ss_pred eEEEEcCCEEEEEECCCCCHHHHHHHHHHHHHHhhhhcCCCccEEEecCCCChHHHHHHcCCCcccCCCCcchhhhhhcc
Confidence 99999999999999999999999999999999963 24688999999999999999999888754321 123
Q ss_pred CCCCeeEEEEecCCeeeEEeec---ccCccCCCCCCEEEEeCCC-E-EEEEEcCCCCHHHHHHHHHHHHHHHHhhccccC
Q 002298 577 VRDPHLFTFSFNKGKFEVEEVY---NFSQDDLLTEDILILDTHA-E-VFVWVGQSVDSKEKQSAFEFGQNYIDMATSLEG 651 (940)
Q Consensus 577 ~~~prLF~~S~~~G~~~v~EI~---~F~QdDL~~ddv~ILD~~~-e-IfVWiG~~a~~~ek~~Al~~A~~Yl~~~~~~~~ 651 (940)
...||||+||+.+|.|.++||. +|+|+||+++|||||||+. + ||||+|+.|+..||+.||.+|++|+++. +
T Consensus 242 ~~~~rLy~vs~~~G~l~~~ev~~~~~~~q~~L~~~dv~ILD~g~~~~ifVW~Gk~a~~~er~~A~~~A~~y~~~~----~ 317 (729)
T 1d0n_A 242 RKLAKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALKTASDFISKM----D 317 (729)
T ss_dssp CCCCEEEEEECSSSSCEEEEEESSSSBCGGGCCTTSEEEEEEGGGTEEEEEECTTSCHHHHTTHHHHHHHHHHHT----T
T ss_pred ccCcEEEEEECCCCCEEEEEeccCCCCCHHHcCCCCEEEEecCCccEEEEEECCCCCHHHHHHHHHHHHHHHhhc----c
Confidence 4789999999999999999997 9999999999999999994 4 9999999999999999999999999985 5
Q ss_pred CCCCCcEEEecCCCCCcccccccc-cCCCC
Q 002298 652 LSPKVPLYKVTEGNEPCFCTTFFS-WDPTK 680 (940)
Q Consensus 652 r~~~~pI~~V~qG~EP~~Ft~~F~-Wd~~k 680 (940)
|++++||.+|.||.||+.||.+|. |++..
T Consensus 318 ~p~~t~i~~V~eG~Ep~~Fk~~F~~W~~~~ 347 (729)
T 1d0n_A 318 YPKQTQVSVLPEGGETPLFRQFFKNWRDPD 347 (729)
T ss_dssp CCTTCEEEEEETTCCCHHHHTTBTTCCCTT
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHhcCCCcc
Confidence 678999999999999999999999 99853
No 8
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-69 Score=606.05 Aligned_cols=283 Identities=32% Similarity=0.494 Sum_probs=238.8
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCC-EEEec
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPC-IIPLE 79 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~-ii~~~ 79 (940)
+||||||||||. ..|+||||+|++||+||+|+||++|++||++|||.|+||||+||+||++||+||+++ |||++
T Consensus 77 ~gD~YIvl~ty~-----~~~~i~~W~G~~ss~de~g~aa~~~v~Ld~~lgg~~vq~R~~QG~Es~~Fls~Fkg~~~ii~~ 151 (371)
T 3fg6_A 77 GGDCYIILYTYP-----RGQIIYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYK 151 (371)
T ss_dssp TTCEEEEEEECS-----SCEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCEEEEEETTCCCHHHHTTSCSSCEEEC-
T ss_pred cCceEEEEEEec-----CCeEEEEeeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEecCCCcHHHHHHhCCceEEEEc
Confidence 699999999992 469999999999999999999999999999999999999999999999999999998 89999
Q ss_pred CcccCCCccccccccceEEEEEecc--eeEEEEEeccCccccCCCCeEEEecC-CeEEEEcCCCCCHHHHHHHHHHHHHh
Q 002298 80 GGVASGFRKTEEEEFETRLYVCKGK--RVVRMKQVPFARSSLNHDDVFILDTK-DKIYQFNGANSNIQERAKALEVIQFL 156 (940)
Q Consensus 80 Gg~~sgf~~~e~~~~~~rL~~vkGk--~~v~~~EV~~s~sSLNsgDvFILd~~-~~IyvW~G~~Sn~~Er~kA~~ia~~I 156 (940)
||+++++.+. ....+|||||||+ +++++.||+++++|||++||||||++ ++||+|+|++||..||.+|+++|+.|
T Consensus 152 Gg~~~~~~~~--~~~~~rL~~vrg~~~~~vr~~EV~~~~ssLns~d~FILd~~~~~iyvW~G~~ss~~Er~~A~~~a~~i 229 (371)
T 3fg6_A 152 NGTSKKGGQA--PAPPTRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAEYVASVL 229 (371)
T ss_dssp ---------------CCEEEEEECCSSSCCEEEEECSSGGGCBTTSEEEEECTTSEEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred CCccCCCccC--CcCccEEEEEeccCCCceEEEEecCCHHHccCCCeEEEEcCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 9987654433 3357899999998 67999999999999999999999999 99999999999999999999999999
Q ss_pred hhccCCCCceEEEecCCCCCCCCChhhHHHHhCCCCCCCCCCCCccccccccCCCeEEEEe--CCeeEEEEcc--ccccc
Q 002298 157 KEKYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIE--DSQVKIVEGE--LSKSM 232 (940)
Q Consensus 157 k~~~~~G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~~~~~~~~~rLy~v~--~G~l~~~e~~--l~q~~ 232 (940)
+.+ +.+|+||. |+.+||++|||..+++......+ ......+|||+|+ +|.+.+.|+. |+|+|
T Consensus 230 ~~~-------~~~v~EG~-----Ep~~Fw~~LGg~~~~~~~~~~~~--~~~~~~~rLf~~s~~~G~~~v~ev~~~f~Q~d 295 (371)
T 3fg6_A 230 KCK-------TLRIQEGE-----EPEEFWNSLGGKKDYQTSPLLET--QAEDHPPRLYGCSNKTGRFVIEEIPGEFTQDD 295 (371)
T ss_dssp TCE-------EEEEETTC-----CCHHHHHHTTSCCCCBCCTTTSS--CCCSSCCEEEEEECTTSSCEEEECCSSCCGGG
T ss_pred cCC-------eEEEeCCC-----CCHHHHHHcCCCcccCcchhhcc--cccccCcEEEEEEcCCCcEEEEEecccccHhH
Confidence 642 36788884 77899999999987765422211 1234579999998 6999999885 99999
Q ss_pred cCCCceEEecCCceEEEEEcCCCCHHHHHHHHHHHHHHHHhc--CCCCCceEEEecCCCCChhhHhcccCCCCC
Q 002298 233 LENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGYETYAFKSNFDSWPSG 304 (940)
Q Consensus 233 L~s~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~yl~~~--~Rp~~t~I~~V~eG~Ep~~FK~~F~~W~~~ 304 (940)
|++++||||||+.+||||+|++|+..||+.||.+|++|++.+ +||.+|||.+|.||.||..||++|.+|++.
T Consensus 296 L~~~dv~ILD~~~~IfVW~G~~as~~Er~~A~~~A~~yi~~~~~~r~~~t~i~~v~eG~Ep~~Fk~~F~~W~~~ 369 (371)
T 3fg6_A 296 LAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSAKMYLETDPSGRDKRTPIVIIKQGHEPPTFTGWFLGWDSS 369 (371)
T ss_dssp SCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHTTCC----------CCEEEEETTCCCHHHHTTSSSCCTT
T ss_pred CCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCccCCCCCCCEEEecCCCCCHHHHhhhccCCcc
Confidence 999999999999999999999999999999999999999987 699899999999999999999999999975
No 9
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=100.00 E-value=2.9e-70 Score=621.84 Aligned_cols=289 Identities=29% Similarity=0.475 Sum_probs=92.8
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+||||||||||. .++...|+||||+|++||+||+|+||++|++||++|||.||||||+||+||++||+||+++|||++|
T Consensus 87 ~gD~YIvl~ty~-~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~Re~QG~Es~~Fls~Fkg~iii~~G 165 (398)
T 3fg7_A 87 GGDCYLLLYTYL-IGEKQHYLLYVWQGSQASQDEITASAYQAVILDQKYNGEPVQIRVPMGKEPPHLMSIFKGRMVVYQG 165 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEEEEEEe-cCCcceEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCceEEEEeecCCCCHHHHHHhCCeEEEeeC
Confidence 599999999997 5678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccccceEEEEEecce--eEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhh
Q 002298 81 GVASGFRKTEEEEFETRLYVCKGKR--VVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKE 158 (940)
Q Consensus 81 g~~sgf~~~e~~~~~~rL~~vkGk~--~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~ 158 (940)
|+++... +.....+|||||||++ +++++|||++++|||++||||||+++.||+|+|++||..||.+|+++|+.|++
T Consensus 166 g~~~~~~--~~~~~~~rLf~VrG~~~~~~ra~EV~~s~sSLns~d~FILd~~~~iyvW~G~~ss~~Er~~A~~va~~i~~ 243 (398)
T 3fg7_A 166 GTSRTNN--LETGPSTRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGCSGDEREMAKMVADTISR 243 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCCc--cCccCCcEEEEEECCCCCceEEEEecCCHHHccCCceEEEEeCCeEEEEeCCCCCHHHHHHHHHHHHHhcC
Confidence 9885321 1233478999999997 69999999999999999999999999999999999999999999999999963
Q ss_pred ccCCCCceEEEecCCCCCCCCChhhHHHHhCCCCCCCCCCCCccccccccCCCeEEEEe--CCeeEEEEcc-ccccccCC
Q 002298 159 KYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIE--DSQVKIVEGE-LSKSMLEN 235 (940)
Q Consensus 159 ~~~~G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~~~~~~~~~rLy~v~--~G~l~~~e~~-l~q~~L~s 235 (940)
+++.+|+||. |+.+||++|||..+++......+ ......+|||+|+ +|.+++.|+. |+|+||++
T Consensus 244 ------~~~~~v~EG~-----Ep~~Fw~~LGg~~~~~~~~~~~~--~~~~~~~rLf~~s~~~G~~~v~EV~~f~Q~dL~~ 310 (398)
T 3fg7_A 244 ------TEKQVVVEGQ-----EPANFWMALGGKAPYANTKRLQE--ENLVITPRLFECSNKTGRFLATEIPDFNQDDLEE 310 (398)
T ss_dssp -----------------------------------------------CCCCCCEEEEEECTTSSCEEEECTTCCGGGCCT
T ss_pred ------CcEEEEeCCC-----CchhHHHHhCCCccCCChhhhcc--chhcccCeeEEEEcCCCCEEEEEecccCHHHCCC
Confidence 5778899884 67889999999877654221111 1124579999998 6999999987 99999999
Q ss_pred CceEEecCCceEEEEEcCCCCHHHHHHHHHHHHHHHHhc--CCCCCceEEEecCCCCChhhHhcccCCCCCC
Q 002298 236 NKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGYETYAFKSNFDSWPSGS 305 (940)
Q Consensus 236 ~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~yl~~~--~Rp~~t~I~~V~eG~Ep~~FK~~F~~W~~~~ 305 (940)
++|||||||.+||||+|++|+..||+.||..|++|++.. +||.+|||.+|.||.||..||++|.+|+...
T Consensus 311 ~dv~ILD~g~~IfVW~G~~as~~Er~~Al~~A~~yi~~~~~~r~~~tpi~~V~eG~Ep~~Fk~~F~~Wd~~~ 382 (398)
T 3fg7_A 311 DDVFLLDVWDQVFFWIGKHANEEEKKAAATTAQEYLKTHPSGRDPETPIIVVKQGHEPPTFTGWFLAWDPFK 382 (398)
T ss_dssp TSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHHSSSSCCTTCCEEEEETTCCCHHHHTTSSCCCTTC
T ss_pred CCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCcccCCCCCCEEEEcCCCCCHHHHHhhhcCChhh
Confidence 999999999999999999999999999999999999987 6887899999999999999999999999764
No 10
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=100.00 E-value=1.5e-67 Score=591.79 Aligned_cols=288 Identities=32% Similarity=0.502 Sum_probs=252.0
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCC-EEEec
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPC-IIPLE 79 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~-ii~~~ 79 (940)
+||||||||||.. ++...|+||||+|++||+||+|+||++|++||++|||.++||||+||+||++||+||+++ +|+++
T Consensus 32 ~gD~YIvl~ty~~-~~~~~~~i~~W~G~~ss~de~~~aa~~~~~ld~~lgg~~vq~R~~Qg~Es~~Fl~~F~g~~~ii~~ 110 (344)
T 2fh1_A 32 GGDSYIILYNYRH-GGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYK 110 (344)
T ss_dssp TTSEEEEEEEEEE-TTEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCSEEEEEETTCCCHHHHGGGTTCCEEEES
T ss_pred CCCeEEEEEEeec-CCCceEEEEEEecCCCCHhHHHHHHHHHHHHHHHhCCCceEEEeecCCCCHHHHHhhCCCeEEEEc
Confidence 6999999999975 456899999999999999999999999999999999999999999999999999999985 66666
Q ss_pred Cc-ccCCCccccccccceEEEEEecce--eEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHh
Q 002298 80 GG-VASGFRKTEEEEFETRLYVCKGKR--VVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFL 156 (940)
Q Consensus 80 Gg-~~sgf~~~e~~~~~~rL~~vkGk~--~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~I 156 (940)
|| .++++. .+...+|||||+|++ .++++||+++++|||++||||||++++||+|+|++|+..||.+|+++|+.|
T Consensus 111 gg~~~~~~~---~~~~~~rL~~v~g~~~~~~~~~eV~~~~ssLns~d~FIL~~~~~iyvW~G~~s~~~er~~A~~~a~~l 187 (344)
T 2fh1_A 111 GGTSREGGQ---TAPASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQELLRVL 187 (344)
T ss_dssp CCCCTTTCS---CCCCSSEEEEEEECTTCCEEEEEECCSGGGCBTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHT
T ss_pred CCcccCCcc---CCCCCceEEEEECCCCCceEEEEecCchhhcCCCceEEEecCCEEEEEECCCCCHHHHHHHHHHHHHh
Confidence 75 556653 234578999999987 799999999999999999999999999999999999999999999999998
Q ss_pred hhccCCCCceEEEecCCCCCCCCChhhHHHHhCCCCCCCCCCCCccccccccCCCeEEEEe--CCeeEEEEcc--ccccc
Q 002298 157 KEKYHDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDDVIAETTPPKLYSIE--DSQVKIVEGE--LSKSM 232 (940)
Q Consensus 157 k~~~~~G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~~~~~~~~~rLy~v~--~G~l~~~e~~--l~q~~ 232 (940)
+ ++|.+|+||. |+.+||++|||..+++.....++ .......+|||+|+ +|.+.+.|+. |+|+|
T Consensus 188 ~-------~~i~~v~EG~-----E~~~Fw~~LGg~~~y~~~~~~~~-~~~~~~~~rLf~~s~~~G~~~v~ev~~~f~q~d 254 (344)
T 2fh1_A 188 R-------AQPVQVAEGS-----EPDGFWEALGGKAAYRTSPRLKD-KKMDAHPPRLFACSNKIGRFVIEEVPGELMQED 254 (344)
T ss_dssp T-------CCCEEEETTC-----CCHHHHHHTTSCCCCBCCHHHHC-SCC--CCCEEEEEECTTSSCEEEEECSSCCGGG
T ss_pred C-------CCcEEEeCCC-----CcHHHHHhcCCCCcccccccccc-ccccccCCEEEEEEcCCCCEEEEEccCCcCHhH
Confidence 3 5788999984 77899999999877765432211 12234689999998 6999998874 99999
Q ss_pred cCCCceEEecCCceEEEEEcCCCCHHHHHHHHHHHHHHHHhc--CCCCCceEEEecCCCCChhhHhcccCCCCCC
Q 002298 233 LENNKCYLLDRGSEVFVWVGRVTQVEERKAASQAAEEFISSQ--NRPKSIRITRVIQGYETYAFKSNFDSWPSGS 305 (940)
Q Consensus 233 L~s~~vyILD~g~eIyVWiGk~as~~eRk~A~~~A~~yl~~~--~Rp~~t~I~~V~eG~Ep~~FK~~F~~W~~~~ 305 (940)
|++++|||||||.+||||+|++|+..||+.||.+|++|++.. +||.+++|.+|.||.||..||++|.+|++..
T Consensus 255 L~~~dv~iLD~g~~IfVW~G~~as~~er~~A~~~A~~y~~~~~~~r~~~t~i~~V~eG~Ep~~Fk~~F~~W~~~~ 329 (344)
T 2fh1_A 255 LATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVKQGFEPPSFVGWFLGWDDDY 329 (344)
T ss_dssp SCTTSEEEEECSSCEEEEECTTCCHHHHHHHHHHHHHHHHTC-------CCEEEEETTCCCHHHHTTSSSCCTTC
T ss_pred CCCCCEEEEeCCCEEEEEECCCCCHHHHHHHHHHHHHHHHhCccCCCCCCcEEEEcCCCCCHHHHHHHhhcChhh
Confidence 999999999999999999999999999999999999999987 8999999999999999999999999999865
No 11
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=365.18 Aligned_cols=246 Identities=18% Similarity=0.232 Sum_probs=109.8
Q ss_pred cEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEE
Q 002298 350 KMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQG 429 (940)
Q Consensus 350 ~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~ 429 (940)
.|+||||+++++++||++.||+||+||||||||||+..+++..|.||||+|++|++||+++||++|++||+.|+|.|||+
T Consensus 34 Gl~iWrIe~~~~~~v~~~~~G~Fy~gd~Yivl~t~~~~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~ 113 (297)
T 3tu5_B 34 GLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQH 113 (297)
T ss_dssp EEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred ceEEEEEcCCEEEECCHHHcCeecCCCeEEEeEeEECCCCceeEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCceEE
Confidence 49999999999999999999999999999999999766788899999999999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhhcC-CeEEEeCccccCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCCcE
Q 002298 430 RIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECF 508 (940)
Q Consensus 430 Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d~F 508 (940)
|++||+||++||+||+ +|+|++||++|||+|+.. +.|.....+|+.+++... .++.+.+-++|+++||
T Consensus 114 Re~Qg~Es~~Fl~~F~~~i~~~~GG~~sgf~~v~~------~~~~~r~~rl~~~e~~~~-----r~~~ls~vs~~~Gd~f 182 (297)
T 3tu5_B 114 REVQGFESATFLGYFKSGLKYKKGGVASKLRKVAE------QTSEGRPKKPSYVEAESE-----RSALLAAIRGHSGTLS 182 (297)
T ss_dssp EEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCCC------CC-------------------------------------
T ss_pred EEeCCcCCHHHHHHhccCcEEecCCCCCCCceecc------cCCCCcccceeeeecccc-----ccceeeEEeccCCcee
Confidence 9999999999999998 599999999999998742 233333345666665444 3345567799999999
Q ss_pred EeeeCCeEEEEECCCCCHHHHHHHHHHHHHhCC-CceEEecccCCcccccccccCCcccCCCCCC---CCC--CCCCCee
Q 002298 509 LLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLKP-GVAIKHAKEGTESSAFWFPLGGKQSYTSKKV---SPE--IVRDPHL 582 (940)
Q Consensus 509 IL~~~~~vyvW~G~~ss~~er~~A~~va~~l~~-~~~~~~v~EG~E~~~FW~~LGGk~~y~~~~~---~~~--~~~~prL 582 (940)
|++.+..++.|..+... .+++..+.+.... ...+..+..+.+++..+..++-+...+.... ..+ ..+.+.|
T Consensus 183 i~Dv~~~A~q~le~~r~---~~~~~~~~d~~~~~~~~v~~~~~~~ep~~~~~~~~p~s~~~~~~~~~~~~~~~dar~A~L 259 (297)
T 3tu5_B 183 LRKVSSLASEELQSFRN---AALGAPGLDKPQQEDLGLPPPPALPPPPAPAPQAPSASVTVSRFSTGTPSNSVNARQALM 259 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccHHHHHHHHHHHH---hhhcccCcCcccccccCcccCCcCCCCCCccccCCCCCCCCCCCCCCcccCchhhhhhhh
Confidence 99999999999865422 2222233222221 2345566788888888888875544332211 111 2256779
Q ss_pred EEEEecCCeeeEEee-----ccc-CccCCCCCC
Q 002298 583 FTFSFNKGKFEVEEV-----YNF-SQDDLLTED 609 (940)
Q Consensus 583 F~~S~~~G~~~v~EI-----~~F-~QdDL~~dd 609 (940)
|.+++.+|.+.+..| .+| +|+-+..++
T Consensus 260 ~aIrsgtGa~rLkKv~~~~~~P~p~~~~~~~~~ 292 (297)
T 3tu5_B 260 DAIRSGTGAARLRKTETQEKNPLPSKETIEQEK 292 (297)
T ss_dssp ---------------------------------
T ss_pred HhhhcCCCCeeccccccccCCCCCchhhhhHHh
Confidence 999999998665444 588 555444444
No 12
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-40 Score=355.57 Aligned_cols=226 Identities=27% Similarity=0.321 Sum_probs=91.0
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+||||||||||..+++.+.|+||||||+++|+||+|+||++||+||++|||.+|||||+||+||++||+||+++|+|++|
T Consensus 58 ~gd~Yivl~t~~~~~g~~~~~i~~W~G~~ss~de~g~aa~~av~Ld~~lgg~~vq~Re~Qg~Es~~Fl~~F~~~i~~~~G 137 (297)
T 3tu5_B 58 TGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKG 137 (297)
T ss_dssp TTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEEEEETTCCCHHHHTTCTTCCEEESC
T ss_pred CCCeEEEeEeEECCCCceeEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEeCCcCCHHHHHHhccCcEEecC
Confidence 69999999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccccceEEEEEecceeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhcc
Q 002298 81 GVASGFRKTEEEEFETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKY 160 (940)
Q Consensus 81 g~~sgf~~~e~~~~~~rL~~vkGk~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~~ 160 (940)
|++|||+||+++.+.+|++++++.+....+++.+++-|+|+|||||+|.+..+|+|. ++.++.+++..+.+..
T Consensus 138 G~~sgf~~v~~~~~~~r~~rl~~~e~~~~r~~~ls~vs~~~Gd~fi~Dv~~~A~q~l-------e~~r~~~~~~~~~d~~ 210 (297)
T 3tu5_B 138 GVASKLRKVAEQTSEGRPKKPSYVEAESERSALLAAIRGHSGTLSLRKVSSLASEEL-------QSFRNAALGAPGLDKP 210 (297)
T ss_dssp CCCCCCBCCCCCC-------------------------------------------------------------------
T ss_pred CCCCCCceecccCCCCcccceeeeeccccccceeeEEeccCCceeeccccHHHHHHH-------HHHHHhhhcccCcCcc
Confidence 999999999998888888888877777778889999999999999999999999996 4567777777777766
Q ss_pred CCCCceEEEecCCCCCCCCChhhHHHHhCCCCCCCCCCCCcccc-ccccCCCeEEEEe--CCeeEE--EE---c-cc-cc
Q 002298 161 HDGNCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVATEDDV-IAETTPPKLYSIE--DSQVKI--VE---G-EL-SK 230 (940)
Q Consensus 161 ~~G~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~~~~~~~~~-~~~~~~~rLy~v~--~G~l~~--~e---~-~l-~q 230 (940)
+.+++.+..+..+ .++...+..++-..+...+....... ........||.|. .|.+.+ ++ . +| ++
T Consensus 211 ~~~~~~v~~~~~~-----~ep~~~~~~~~p~s~~~~~~~~~~~~~~~dar~A~L~aIrsgtGa~rLkKv~~~~~~P~p~~ 285 (297)
T 3tu5_B 211 QQEDLGLPPPPAL-----PPPPAPAPQAPSASVTVSRFSTGTPSNSVNARQALMDAIRSGTGAARLRKTETQEKNPLPSK 285 (297)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCcccCCcC-----CCCCCccccCCCCCCCCCCCCCCcccCchhhhhhhhHhhhcCCCCeeccccccccCCCCCch
Confidence 6666777666655 34455565555333332221111111 1123456799997 465433 22 2 25 55
Q ss_pred cccCCCce
Q 002298 231 SMLENNKC 238 (940)
Q Consensus 231 ~~L~s~~v 238 (940)
+.+..++.
T Consensus 286 ~~~~~~~~ 293 (297)
T 3tu5_B 286 ETIEQEKQ 293 (297)
T ss_dssp --------
T ss_pred hhhhHHhh
Confidence 55555543
No 13
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=100.00 E-value=1.2e-37 Score=298.85 Aligned_cols=121 Identities=31% Similarity=0.554 Sum_probs=115.7
Q ss_pred CCCCCCcccCCccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHH
Q 002298 338 NEEVPPLLEGGGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANT 417 (940)
Q Consensus 338 ~~e~~~~~d~sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~ 417 (940)
++..+|+||++++++||||+++++++||++.||+||+|||||||||| ..+++.+|+||||+|++|++||+++||++|++
T Consensus 5 ~~~~~~~d~~~~~l~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~t~-~~~g~~~~~i~~W~G~~ss~de~g~Aa~~ave 83 (126)
T 2vik_A 5 KKVTGKLDKTTPGIQIWRIENMEMVPVPTKSYGNFYEGDCYVLLSTR-KTGSGFSYNIHYWLGKNSSQDEQGAAAIYTTQ 83 (126)
T ss_dssp TSSTTSSCSSCCEEEEEECGGGSCCEECTTTTTCCCSSSCEEEEEEE-ECSSSEEEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred hhhcCCcCcCCCCEEEEEEeCCEEEECChhhcCeeCCCCeEEEEEec-cCCCceeEEEEEEeCCCCCchhHHHHHHHHHH
Confidence 45667999999999999999999999999999999999999999999 57888999999999999999999999999999
Q ss_pred HHhhcCCCCeEEEeecCCCCHHHHhhcC-CeEEEeCccccCCc
Q 002298 418 MCNSLKGRPVQGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYK 459 (940)
Q Consensus 418 l~~~l~g~~vq~Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~~ 459 (940)
||+.++|.|+|+|++||+||+|||+||+ +|+|++||.+|+|+
T Consensus 84 Ld~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf~ 126 (126)
T 2vik_A 84 MDEYLGSVAVQHREVQGHESETFRAYFKQGLIYKQGGVASGMK 126 (126)
T ss_dssp HHHHTTSCSCEEEEETTTSHHHHHHHCSSCCCCCCSCTTCSCC
T ss_pred HHHHcCCCccEEEEECCCCCHHHHHHcCCCeEEEECcccCCCC
Confidence 9999999999999999999999999998 69999999999884
No 14
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=100.00 E-value=1.9e-35 Score=284.43 Aligned_cols=111 Identities=28% Similarity=0.577 Sum_probs=106.2
Q ss_pred CccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 348 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 348 sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
+..++||||+++++++||++.||+||+||||||||||...+++.+|+||||+|++|++||+++||++|++||+.++|.|+
T Consensus 17 ~~gl~vWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~v 96 (128)
T 3cip_G 17 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 96 (128)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEcCCCCCcchHHHHHHHHHHHHHHcCCCce
Confidence 56799999999999999999999999999999999997567788999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCC
Q 002298 428 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGY 458 (940)
Q Consensus 428 q~Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~ 458 (940)
|+|++||+||+|||+||+ +|+|++||.+|+|
T Consensus 97 q~R~~QG~E~~~Fl~~F~~~iii~~Gg~~sgf 128 (128)
T 3cip_G 97 QHREVQGFESATFLGYFKSGLKYKKGGVASGF 128 (128)
T ss_dssp EEEEETTCCCHHHHTTCTTCCEEESCCCCCCC
T ss_pred EEEeECCCCCHHHHHHhCCCeEEEECCcCCCC
Confidence 999999999999999999 5999999999875
No 15
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=100.00 E-value=2.8e-35 Score=289.50 Aligned_cols=116 Identities=28% Similarity=0.554 Sum_probs=110.6
Q ss_pred CccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 348 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 348 sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
+..++||||+++.+++||++.||+||+||||||||||...+++.+|+||||+|++|++||+++||++|++||+.|+|.|+
T Consensus 14 ~~gl~VWrIe~~~~~~vp~~~~G~Fy~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~v 93 (147)
T 1t44_G 14 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 93 (147)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCce
Confidence 56799999999999999999999999999999999997567788999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCccccc
Q 002298 428 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKKSLA 463 (940)
Q Consensus 428 q~Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~~~~~~ 463 (940)
|+|++||+||+|||+||+ +|+|++||.+++|+|+..
T Consensus 94 q~R~~QG~Ep~~Fl~~F~~~iii~~Gg~~s~~k~~et 130 (147)
T 1t44_G 94 QHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVET 130 (147)
T ss_dssp EEEEETTCCCHHHHTTCTTCCEEESCCCCCCCBCCCC
T ss_pred EEEEECCCCCHHHHHHhCCCeEEEeCCcccccceecc
Confidence 999999999999999999 699999999999998753
No 16
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=100.00 E-value=3e-35 Score=288.89 Aligned_cols=113 Identities=28% Similarity=0.578 Sum_probs=108.4
Q ss_pred CccEEEEEEeCCceeeCCCCccceeeeCcEEEEEEeeecCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 348 GGKMEVWRINGSAKTSLPKEDIGKFYSGDCYIVLYTYHSGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 348 sg~l~VWrIe~~~~~~v~~~~~G~FysgDcYIVlytY~~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
+..++||||+++++++||++.||+||+||||||||||...+++.+|+||||+|++|++||+++||++|++||+.++|.|+
T Consensus 36 ~~gl~VWrIe~~~~v~vp~~~~G~FysgD~YIVl~ty~~~~g~~~~~IyfW~G~~ss~de~gaAA~~aveLd~~lgg~~v 115 (150)
T 2ff3_A 36 EPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAV 115 (150)
T ss_dssp SSEEEEEEEETTEEEECCGGGTTEEETTSEEEEEEEEECTTSSEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEEEeCCEEEECChHHcCeecCCCeEEEEEEEecCCCceEEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCce
Confidence 56799999999999999999999999999999999997567789999999999999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhhcC-CeEEEeCccccCCcc
Q 002298 428 QGRIFQGREPPQFVALFQ-PMVVVKGGLCSGYKK 460 (940)
Q Consensus 428 q~Rv~QGkEp~~Fl~iF~-~~ii~~GG~ss~~~~ 460 (940)
|+||+||+||++||+||+ +|+|++||.+|+|++
T Consensus 116 Q~Re~QG~Ep~~Fl~lFkg~iii~~GG~~Sgf~~ 149 (150)
T 2ff3_A 116 QHREVQGFESATFLGYFKSGLKYKKGGVASGFKH 149 (150)
T ss_dssp EEEEETTCCCHHHHHTCTTCCEEESCCCCCCCBC
T ss_pred EEEeECCCCCHHHHHHhcCCeEEEeCCcCCcccc
Confidence 999999999999999999 699999999999986
No 17
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=99.96 E-value=4.5e-30 Score=252.49 Aligned_cols=96 Identities=52% Similarity=0.887 Sum_probs=91.2
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+||||||||||...++...|+||||+|++||+|++|+||++|++||++|||.|+|+||+||+||++||+||+++|+|++|
T Consensus 40 ~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~Ep~~Fl~~F~~~iii~~G 119 (147)
T 1t44_G 40 TGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKG 119 (147)
T ss_dssp TTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEEEEETTCCCHHHHTTCTTCCEEESC
T ss_pred CCCeEEEEEEEecCCCceEEEEEEEeCCCCChhHHHHHHHHHHHHHHHcCCCceEEEEECCCCCHHHHHHhCCCeEEEeC
Confidence 69999999999777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccccce
Q 002298 81 GVASGFRKTEEEEFET 96 (940)
Q Consensus 81 g~~sgf~~~e~~~~~~ 96 (940)
|++|||+|++++.+.+
T Consensus 120 g~~s~~k~~et~~~~~ 135 (147)
T 1t44_G 120 GVASGFKHVETQEKNP 135 (147)
T ss_dssp CCCCCCBCCCCEECCC
T ss_pred CcccccceeccccccC
Confidence 9999999999766544
No 18
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=99.96 E-value=4.4e-29 Score=240.07 Aligned_cols=86 Identities=56% Similarity=0.952 Sum_probs=83.3
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+||||||||||...++...|+||||+|++||+||+++||++|++||++|||.|+|+||+||+||++||+||+++|+|++|
T Consensus 43 ~gd~YIvl~ty~~~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~G 122 (128)
T 3cip_G 43 TGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKG 122 (128)
T ss_dssp TTCEEEEEEEEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCEEEEEEETTCCCHHHHTTCTTCCEEESC
T ss_pred CCCeEEEEEEEecCCCceEEEEEEEcCCCCCcchHHHHHHHHHHHHHHcCCCceEEEeECCCCCHHHHHHhCCCeEEEEC
Confidence 69999999999777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC
Q 002298 81 GVASGF 86 (940)
Q Consensus 81 g~~sgf 86 (940)
|++|||
T Consensus 123 g~~sgf 128 (128)
T 3cip_G 123 GVASGF 128 (128)
T ss_dssp CCCCCC
T ss_pred CcCCCC
Confidence 999987
No 19
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=99.96 E-value=5.2e-29 Score=244.62 Aligned_cols=89 Identities=54% Similarity=0.932 Sum_probs=86.1
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+||||||||||...++...++||||+|++||+||+++||++|++||++|||.|+|+||+||+||++||+||+++|+|++|
T Consensus 62 sgD~YIVl~ty~~~~g~~~~~IyfW~G~~ss~de~gaAA~~aveLd~~lgg~~vQ~Re~QG~Ep~~Fl~lFkg~iii~~G 141 (150)
T 2ff3_A 62 TGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKG 141 (150)
T ss_dssp TTSEEEEEEEEECTTSSEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCCEEEEEETTCCCHHHHHTCTTCCEEESC
T ss_pred CCCeEEEEEEEecCCCceEEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCceEEEeECCCCCHHHHHHhcCCeEEEeC
Confidence 69999999999777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccc
Q 002298 81 GVASGFRKT 89 (940)
Q Consensus 81 g~~sgf~~~ 89 (940)
|++|||+||
T Consensus 142 G~~Sgf~~v 150 (150)
T 2ff3_A 142 GVASGFKHV 150 (150)
T ss_dssp CCCCCCBCC
T ss_pred CcCCccccC
Confidence 999999975
No 20
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=99.95 E-value=9.6e-29 Score=237.13 Aligned_cols=86 Identities=55% Similarity=0.998 Sum_probs=82.4
Q ss_pred CCcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHHHhccCCCEEEecC
Q 002298 1 MGDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKFLSYFKPCIIPLEG 80 (940)
Q Consensus 1 sGD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~Fls~Fk~~ii~~~G 80 (940)
+|||||||||+. .++...|+||||+|++||+||+|+||++|++||++|||.|||+||+||+||++||+||+++|+|++|
T Consensus 41 ~gd~YIvl~t~~-~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~E~~~Fl~~F~~~iii~~G 119 (126)
T 2vik_A 41 EGDCYVLLSTRK-TGSGFSYNIHYWLGKNSSQDEQGAAAIYTTQMDEYLGSVAVQHREVQGHESETFRAYFKQGLIYKQG 119 (126)
T ss_dssp SSSCEEEEEEEE-CSSSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTSCSCEEEEETTTSHHHHHHHCSSCCCCCCS
T ss_pred CCCeEEEEEecc-CCCceeEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCCCccEEEEECCCCCHHHHHHcCCCeEEEEC
Confidence 699999999985 5678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCc
Q 002298 81 GVASGFR 87 (940)
Q Consensus 81 g~~sgf~ 87 (940)
|++|||+
T Consensus 120 g~~sgf~ 126 (126)
T 2vik_A 120 GVASGMK 126 (126)
T ss_dssp CTTCSCC
T ss_pred cccCCCC
Confidence 9999985
No 21
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=99.94 E-value=1.5e-27 Score=225.92 Aligned_cols=109 Identities=37% Similarity=0.597 Sum_probs=88.6
Q ss_pred CCCccccccccceEEEEEecceeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhccCCC
Q 002298 84 SGFRKTEEEEFETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDG 163 (940)
Q Consensus 84 sgf~~~e~~~~~~rL~~vkGk~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~~~~G 163 (940)
|||+||+++.+.+|||||||+++++++||+++++|||++||||||+++.||+|+|++||..||.+|+++|+.| +.+|.|
T Consensus 1 SGf~~v~~~~~~~rL~~v~G~~~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G~~ss~~Ek~~A~~~a~~i-~~er~g 79 (114)
T 1svq_A 1 SGFNHVKPTEYKPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEVARAI-DAERKG 79 (114)
T ss_dssp ---------CCCEEEEEEECTTSCEEEEECCCSSSCCTTSEEEEEETTEEEECCCTTCCHHHHHHHHHHHHHH-HHHHTT
T ss_pred CCCccccCCCCCcEEEEEECCCcEEEEEecCCHHHcCCCCeEEEecCCEEEEEeCCCCCHHHHHHHHHHHHHh-hhccCC
Confidence 6999999888999999999999999999999999999999999999999999999999999999999999999 566888
Q ss_pred CceEEEecCCCCCCCCChhhHHHHhCCCCCCCC
Q 002298 164 NCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGK 196 (940)
Q Consensus 164 ~~~i~iVdeG~~~~~~e~~eFw~~LGg~~~~~~ 196 (940)
+++|.+|+||.. .|+.+||.+|||.+++..
T Consensus 80 ~~~i~vv~eg~~---~E~~~Fw~~LGg~~~~~~ 109 (114)
T 1svq_A 80 LPKVEVFCETDS---DIPAEFWKLLGGKGAIAA 109 (114)
T ss_dssp CSEEEECCCCTT---CCCHHHHHHHTC------
T ss_pred CccEEEEeCCCc---CCcHHHHHHcCCCCCCcc
Confidence 999999999842 378899999999877654
No 22
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=99.92 E-value=2.8e-25 Score=207.11 Aligned_cols=98 Identities=33% Similarity=0.529 Sum_probs=92.6
Q ss_pred ceEEEEEecceeEEEEEeccCccccCCCCeEEEecCCeEEEEcCCCCCHHHHHHHHHHHHHhhhccCCCCceEEEecCCC
Q 002298 95 ETRLYVCKGKRVVRMKQVPFARSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQFLKEKYHDGNCNVAIVDDGK 174 (940)
Q Consensus 95 ~~rL~~vkGk~~v~~~EV~~s~sSLNsgDvFILd~~~~IyvW~G~~Sn~~Er~kA~~ia~~Ik~~~~~G~~~i~iVdeG~ 174 (940)
.+|||||||+++++++||+++++|||++||||||+++.||+|+|++||..||.+|+++|+.|++.+|.|+++|.+|+||.
T Consensus 2 ~~rL~~v~g~~~~~~~eV~~~~~sLns~d~FILd~g~~iyvW~G~~s~~~Ek~~A~~~a~~i~~~er~~~~~i~~v~eG~ 81 (104)
T 1kcq_A 2 VQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEGT 81 (104)
T ss_dssp CCEEEEEEESSSEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHTSTTCSEEEEEETTC
T ss_pred CcEEEEEECCCcEEEEEecCCHHHcCCCCeEEEeCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhhccCCCCcEEEEeCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999988888999999999995
Q ss_pred CCCCCChhhHHHHhCCCCCCCCC
Q 002298 175 LDTESDSGEFWVLFGGFAPIGKK 197 (940)
Q Consensus 175 ~~~~~e~~eFw~~LGg~~~~~~~ 197 (940)
|+.+||.+|||.++++..
T Consensus 82 -----E~~~Fw~~LGg~~~~~~~ 99 (104)
T 1kcq_A 82 -----EPEAMLQVLGPKPALPAG 99 (104)
T ss_dssp -----CCHHHHHHHCSCCCCCCC
T ss_pred -----CCHHHHHHcCCCCCCCCC
Confidence 778999999999877654
No 23
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=99.91 E-value=2.2e-25 Score=188.97 Aligned_cols=64 Identities=38% Similarity=0.550 Sum_probs=60.3
Q ss_pred CCcccChHHHhhc---cCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 877 SRSTFSYDQLKAR---SDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 877 ~~~~~~~~~l~~~---~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
+.++|||++|+.+ +.+||+|||+++||.||||+||++||||||+||++||+|||++|||++|||
T Consensus 2 ~~~~ypy~~L~~~~~~~~~lP~gVD~~~lE~yLsdedF~~vFgmsr~eF~~LP~WKq~~lKk~~~LF 68 (68)
T 1qzp_A 2 GLQIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKKKASLF 68 (68)
T ss_dssp CCCCBCSTTTCCCSCTTCCCCSSCCGGGCGGGBCHHHHHHHSSSCHHHHHHSCHHHHHHHHHHHTCC
T ss_pred CCccccHHHHHHhcccccCCCCCCCchHHHhhCCHHHHHHHHCcCHHHHHHChHHHHHHHHHHhcCC
Confidence 3578999999953 578999999999999999999999999999999999999999999999999
No 24
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=99.91 E-value=5e-25 Score=185.39 Aligned_cols=65 Identities=43% Similarity=0.675 Sum_probs=60.1
Q ss_pred CCCcccChHHHh-hccCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 876 TSRSTFSYDQLK-ARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 876 ~~~~~~~~~~l~-~~~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
.+..+|||++|+ ..+.+||+|||++++|.||||+||++||||+|+||++||+|||++|||++|||
T Consensus 2 ~~~~~yp~~~L~~~~~~~lP~gVD~~~lE~yLsdedF~~vFgms~~eF~~LP~WKq~~lKk~~~LF 67 (67)
T 1yu8_X 2 TKLETFPLDVLVNTAAEDLPRGVDPSAKENHLSDEDFKAVFGMTRSAFANLPLWKQQNLKKEKGLF 67 (67)
T ss_dssp --CCCCCHHHHHSSCGGGSCTTCCTTCGGGGSCHHHHHHHHSSCHHHHHTSCHHHHHHHHHHTTCC
T ss_pred CCccccCHHHHHHhccCCCCcccChHHHHhcCCHHHHHHHHCcCHHHHHHChHHHHHHHHHHhcCC
Confidence 356799999999 55668999999999999999999999999999999999999999999999999
No 25
>2k6m_S Supervillin; SVHP, HP, headpiece, archvillin, actin capping, actin-binding, alternative splicing, calcium, cytoplasm, cytoskeleton, membrane; NMR {Homo sapiens} PDB: 2k6n_A
Probab=99.91 E-value=6.1e-25 Score=185.37 Aligned_cols=62 Identities=32% Similarity=0.561 Sum_probs=59.0
Q ss_pred CCcccChHHHhhccCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 877 SRSTFSYDQLKARSDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 877 ~~~~~~~~~l~~~~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
+.++|||++|+. .++|+||||++||.||||+||++||||||+||++||+|||++|||++|||
T Consensus 6 ~~~~yp~~~L~~--~~lP~gVD~~~lE~yLsdedF~~vFgmsr~eF~~LP~WKq~~lKk~~~LF 67 (67)
T 2k6m_S 6 CKTIYPLADLLA--RPLPEGVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGLF 67 (67)
T ss_dssp CCCCCCHHHHTT--SCCCSSSBTTBCGGGSCHHHHHHHTSSCHHHHTTSCHHHHHHHHHHHTCC
T ss_pred cCCccCHHHHhc--CCCCCCCCchHHHhhCCHHHHHHHHCcCHHHHHHCcHHHHHHHHHHhCCC
Confidence 457899999995 47999999999999999999999999999999999999999999999999
No 26
>1ujs_A Actin-binding LIM protein homologue; VHP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 2l3x_A
Probab=99.90 E-value=1.4e-24 Score=191.73 Aligned_cols=64 Identities=34% Similarity=0.531 Sum_probs=60.2
Q ss_pred CCcccChHHHhhc---cCCCCCCCCccccccCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 877 SRSTFSYDQLKAR---SDNPVTGIDFKRREAYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 877 ~~~~~~~~~l~~~---~~~~p~~vd~~~~E~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
.+++|||++|+.+ +.+||+||||++||.||||+||++||||+|+||++||+|||++|||+++||
T Consensus 16 ~~~~Ypye~L~~~~~~~~~lP~gVD~tklE~YLSdedF~~vFgMsr~eF~~LP~WKq~~lKK~~gLF 82 (88)
T 1ujs_A 16 EYKIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFDRLALWKRNELKKQARLF 82 (88)
T ss_dssp CCCCCCTTTTCCCTTTTCCCCSSCCTTTGGGGSCTTHHHHHHSSCHHHHTTSCHHHHHHHHHHTTCC
T ss_pred hcccccHHHHHHhcccccCCCcccCHHHHHhcCCHHHHHHHHCcCHHHHHHChHHHHHHHHHHcCCc
Confidence 3689999999953 368999999999999999999999999999999999999999999999999
No 27
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=99.87 E-value=2.6e-22 Score=187.05 Aligned_cols=92 Identities=24% Similarity=0.425 Sum_probs=85.7
Q ss_pred eeEEEEEecCCCCceEEEeccCcCCCCCCCcEEeeeCCeEEEEECCCCCHHHHHHHHHHHHHhC-----CCceEEecccC
Q 002298 477 IALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKVAEFLK-----PGVAIKHAKEG 551 (940)
Q Consensus 477 ~~Lf~V~G~~~~~~~aveV~~~asSLnS~d~FIL~~~~~vyvW~G~~ss~~er~~A~~va~~l~-----~~~~~~~v~EG 551 (940)
+|||||+|. .+++++||++.++||||+|||||++++.||+|+|++|+..||.+|..+|+.|+ ....+.+|+||
T Consensus 3 ~rL~~v~g~--~~~~~~eV~~~~~sLns~d~FILd~g~~iyvW~G~~s~~~Ek~~A~~~a~~i~~~er~~~~~i~~v~eG 80 (104)
T 1kcq_A 3 QRLFQVKGR--RVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDNERSGRARVHVSEEG 80 (104)
T ss_dssp CEEEEEEES--SSEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHHHHHHHHHHHHTSTTCSEEEEEETT
T ss_pred cEEEEEECC--CcEEEEEecCCHHHcCCCCeEEEeCCCEEEEEeCCCCCHHHHHHHHHHHHHHHhhccCCCCcEEEEeCC
Confidence 699999996 69999999999999999999999999999999999999999999999999986 24578999999
Q ss_pred CcccccccccCCcccCCCC
Q 002298 552 TESSAFWFPLGGKQSYTSK 570 (940)
Q Consensus 552 ~E~~~FW~~LGGk~~y~~~ 570 (940)
.||++||.+|||+.+|+..
T Consensus 81 ~E~~~Fw~~LGg~~~~~~~ 99 (104)
T 1kcq_A 81 TEPEAMLQVLGPKPALPAG 99 (104)
T ss_dssp CCCHHHHHHHCSCCCCCCC
T ss_pred CCCHHHHHHcCCCCCCCCC
Confidence 9999999999999988754
No 28
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=99.86 E-value=1.7e-22 Score=191.27 Aligned_cols=104 Identities=32% Similarity=0.528 Sum_probs=81.1
Q ss_pred cCCccccccCCCCCccccCCceeEEEEEecCCCCceEEEeccCcCCCCCCCcEEeeeCCeEEEEECCCCCHHHHHHHHHH
Q 002298 456 SGYKKSLADKGLTDETYTADSIALIRISGTSIHNNKTEQVDAVATSLNSSECFLLQSGSTMFTWHGNQSTFEQQQLAAKV 535 (940)
Q Consensus 456 s~~~~~~~e~~~~~~~~~~~~~~Lf~V~G~~~~~~~aveV~~~asSLnS~d~FIL~~~~~vyvW~G~~ss~~er~~A~~v 535 (940)
|||+|+..+ ...+|||||+|+ .+++++||++.++||||+|||||++++.||+|+|++|+..||.+|..+
T Consensus 1 SGf~~v~~~---------~~~~rL~~v~G~--~~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G~~ss~~Ek~~A~~~ 69 (114)
T 1svq_A 1 SGFNHVKPT---------EYKPRLLHISGD--KNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQEKNKAAEV 69 (114)
T ss_dssp ------------------CCCEEEEEEECT--TSCEEEEECCCSSSCCTTSEEEEEETTEEEECCCTTCCHHHHHHHHHH
T ss_pred CCCccccCC---------CCCcEEEEEECC--CcEEEEEecCCHHHcCCCCeEEEecCCEEEEEeCCCCCHHHHHHHHHH
Confidence 468776311 135799999997 789999999999999999999999999999999999999999999999
Q ss_pred HHHhCCC----ceEEecccCC--cccccccccCCcccCCCC
Q 002298 536 AEFLKPG----VAIKHAKEGT--ESSAFWFPLGGKQSYTSK 570 (940)
Q Consensus 536 a~~l~~~----~~~~~v~EG~--E~~~FW~~LGGk~~y~~~ 570 (940)
|..|... ..+.+|+||+ ||++||.+|||+.+|...
T Consensus 70 a~~i~~er~g~~~i~vv~eg~~~E~~~Fw~~LGg~~~~~~~ 110 (114)
T 1svq_A 70 ARAIDAERKGLPKVEVFCETDSDIPAEFWKLLGGKGAIAAK 110 (114)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTCCCHHHHHHHTC-------
T ss_pred HHHhhhccCCCccEEEEeCCCcCCcHHHHHHcCCCCCCccc
Confidence 9998432 4688999999 999999999999888653
No 29
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=99.70 E-value=4.7e-18 Score=126.38 Aligned_cols=37 Identities=46% Similarity=0.833 Sum_probs=35.8
Q ss_pred cCCCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 904 AYLSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 904 ~yLs~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
.||||+||++||||+|+||++||+|||++|||++|||
T Consensus 1 ~yLsd~dF~~vFgmsr~eF~~LP~WKq~~lKk~~~LF 37 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQFAALPGWKQLQMKKEKGLF 37 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHHHHSCHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHCcCHHHHHHChHHHHHHHHHHhcCC
Confidence 5999999999999999999999999999999999998
No 30
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=99.65 E-value=5.1e-17 Score=119.24 Aligned_cols=35 Identities=54% Similarity=0.910 Sum_probs=34.6
Q ss_pred CCHHHHHHHhCCCHHHHhcCchhhHhhhhhhcCCC
Q 002298 906 LSDEEFQTVFGMMKEAFYKLPKWKQDMQKKKFDLF 940 (940)
Q Consensus 906 Ls~~~F~~~f~m~~~~f~~lp~Wkq~~~Kk~~~Lf 940 (940)
|||+||++||||+|+||++||+|||++|||++|||
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP~WKq~~lKk~~~LF 35 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLPLWLQQHLKKEKGLF 35 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHCCCHHHHHHCcHHHHHHHHHHhCCC
Confidence 89999999999999999999999999999999999
No 31
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=95.17 E-value=0.064 Score=65.82 Aligned_cols=111 Identities=18% Similarity=0.222 Sum_probs=70.3
Q ss_pred CCCeeEEEEecC-CeeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHH-----------------------
Q 002298 578 RDPHLFTFSFNK-GKFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQ----------------------- 633 (940)
Q Consensus 578 ~~prLF~~S~~~-G~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~----------------------- 633 (940)
..|+||.+++-. .....-+-...+-+-|.++.|||||++..||||+|+.+++.--.
T Consensus 619 iyP~L~~~h~~~~~~~~~P~~v~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~~l~dlFgv~~~~~i~~~~~~lp~~~~ 698 (766)
T 3eh2_A 619 FYPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDN 698 (766)
T ss_dssp HSCEEEECSSCCCSCC--CCCBCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSCSSGGGSCTTCCSCCCCSS
T ss_pred HhheEEEeecCCcccccCCCCcCCcHHHcCCCcEEEEEcCcEEEEEecCCCCHHHHHHHcCCCchhhcCcccccCCCCCC
Confidence 679999886321 11112233467888899999999999999999999999765221
Q ss_pred ---HHHHHHHHHHHhhccccCCCCCCcEEEecCCCCCcc--cccccccCCCCccccCccHHHHHHHHh
Q 002298 634 ---SAFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCF--CTTFFSWDPTKATVQGNSFQKKVALLF 696 (940)
Q Consensus 634 ---~Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~--Ft~~F~Wd~~k~~~~~~s~~~~~~~~~ 696 (940)
.-+..-.++|+. .|+...|+++|++| .|.+ |..++ =++.-.. .+.||.+.|..|.
T Consensus 699 ~~s~~vr~ii~~lr~-----~~~~~~~l~ivr~~-~~~~~~f~~~L-vED~~~~-~~~SY~dfL~~lh 758 (766)
T 3eh2_A 699 PLSKKVRGLIDSLRA-----QRSRYMKLTVVKQE-DKMEMLFKHFL-VEDKSLS-GGASYVDFLCHMH 758 (766)
T ss_dssp HHHHHHHHHHHHHHT-----TSSSCCEEEEEESS-SSTHHHHHTTC-TTSCCTT-TCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----hCCCCceEEEEeCC-CChHHHHHHhC-cccCCCC-CCCCHHHHHHHHH
Confidence 112222333433 34567899999998 5543 33322 2332111 1579999988775
No 32
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=95.12 E-value=0.046 Score=67.49 Aligned_cols=54 Identities=15% Similarity=0.314 Sum_probs=41.0
Q ss_pred CCCeeEEEEecC---C------------eeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHH
Q 002298 578 RDPHLFTFSFNK---G------------KFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKE 631 (940)
Q Consensus 578 ~~prLF~~S~~~---G------------~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~e 631 (940)
..|+||.+++.. | .+.+-+-.+.+-+-|+++.+||||+|..||+|+|+.+++.-
T Consensus 636 iyP~L~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lwvg~~~~~~l 704 (810)
T 1pcx_A 636 IYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPAL 704 (810)
T ss_dssp HSCEEEECTTCCSSTTSBC--------CCBCCCCBCCSSTTSCCTTCEEEEECSSEEEEEECTTCCHHH
T ss_pred ccCEEEEeccCcccccccccccccccccccccCCcccCCHHHhCcCCEEEEECCCEEEEEeCCCCCHHH
Confidence 679999876421 2 22223335788888999999999999999999999988543
No 33
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=94.91 E-value=0.07 Score=65.30 Aligned_cols=110 Identities=15% Similarity=0.224 Sum_probs=67.0
Q ss_pred CCCeeEEEEec--CCeeeE-------EeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHH--------------
Q 002298 578 RDPHLFTFSFN--KGKFEV-------EEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQS-------------- 634 (940)
Q Consensus 578 ~~prLF~~S~~--~G~~~v-------~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~~-------------- 634 (940)
..|+||.+++- .|.+.. -...+.+-+-|.++.|||||++..||||+|+.+++.--..
T Consensus 600 iyP~L~~~h~l~~~~~~~~~~~~~~~P~~l~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~ll~dlFGv~~~~~~~~~~ 679 (751)
T 3eh1_A 600 IHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKM 679 (751)
T ss_dssp HSCEEEECTTCCSTTCEEETTEEECCCCCBCSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHTTCCSSGGGCCSSB
T ss_pred ccceEEEeecCccccCcccCCCccCCCCcccCCHHHcccCCEEEEECCCEEEEEECCCCCHHHHHHHcCCCchhhcCccc
Confidence 67999988631 122211 1123568889999999999999999999999987643211
Q ss_pred ------------HHHHHHHHHHhhccccCCCCCCcEEEecCCCCCcc--cccccccCCCCccccCccHHHHHHHHh
Q 002298 635 ------------AFEFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCF--CTTFFSWDPTKATVQGNSFQKKVALLF 696 (940)
Q Consensus 635 ------------Al~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~--Ft~~F~Wd~~k~~~~~~s~~~~~~~~~ 696 (940)
-+..-.++++. .|.....+++|++| .|.. |..++ =++. .. .+-||.+.|..|.
T Consensus 680 ~~lp~~~t~~s~~vr~ii~~lr~-----~r~~~~~l~vvr~~-~~~~~~f~~~L-vED~-~~-~~~SY~~fL~~~h 746 (751)
T 3eh1_A 680 THLPELDTLSSERARSFITWLRD-----SRPLSPILHIVKDE-SPAKAEFFQHL-IEDR-TE-AAFSYYEFLLHVQ 746 (751)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHH-----TSSSCCEEEEEESS-SSSHHHHHTTC-TTSC-BT-TBCCHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHh-----cCCCcceEEEEeCC-CchHHHHHHhC-cccC-CC-CCCCHHHHHHHHH
Confidence 11122234443 23333346778877 5544 33322 2332 23 4789999887775
No 34
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=94.44 E-value=0.11 Score=63.90 Aligned_cols=112 Identities=19% Similarity=0.205 Sum_probs=70.5
Q ss_pred CCCeeEEEEecCCee-eEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHHHHHHHH--------------------
Q 002298 578 RDPHLFTFSFNKGKF-EVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQSAF-------------------- 636 (940)
Q Consensus 578 ~~prLF~~S~~~G~~-~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ek~~Al-------------------- 636 (940)
..|+||.+.+-.... ..-+-.+.+-+-|.++.|||||++..||||+|..+++.-....+
T Consensus 623 iyP~L~~~h~l~~~~~~~P~~v~ls~~~l~~~giyLLD~g~~i~lw~G~~v~~~l~~~lfgv~~~~~i~~~~~~lp~~~~ 702 (770)
T 3efo_B 623 FYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGN 702 (770)
T ss_dssp HSCEEEECTTCCSSSCSCCCCCCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSSSSGGGCCTTCCSCCCCCS
T ss_pred hccceEEEeccccccccCCCCcCCcHHHcCCCcEEEEECCcEEEEEecCCCCHHHHHHhcCCCchhhcCcccccCCCCCC
Confidence 689999885422111 11233467888899999999999999999999998865432211
Q ss_pred ------HHHHHHHHhhccccCCCCCCcEEEecCCCCCcc--cccccccCCCCccccCccHHHHHHHHhc
Q 002298 637 ------EFGQNYIDMATSLEGLSPKVPLYKVTEGNEPCF--CTTFFSWDPTKATVQGNSFQKKVALLFG 697 (940)
Q Consensus 637 ------~~A~~Yl~~~~~~~~r~~~~pI~~V~qG~EP~~--Ft~~F~Wd~~k~~~~~~s~~~~~~~~~~ 697 (940)
..-.++|+. .|....||++|++| .|.+ |..++ =++.... .+.||.+.|..|..
T Consensus 703 ~~s~~vr~ii~~lr~-----~r~~~~~l~ivr~~-~~~e~~f~~~L-vED~~~~-~~~SY~dfL~~lh~ 763 (770)
T 3efo_B 703 PYSQQLRMIMGIIQQ-----KRPYSMKLTIVKQR-EQPEMVFRQFL-VEDKGLY-GGSSYVDFLCCVHK 763 (770)
T ss_dssp SHHHHHHHHHHHHHT-----TCSSCCEEEEEEST-TSTTHHHHTTC-TTSCC----CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-----hCCCCccEEEEeCC-CChHHHHHHhC-cccCCCC-CCCCHHHHHHHHHH
Confidence 222233333 34567899999998 4543 33222 2332212 36799998887753
No 35
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=94.19 E-value=0.12 Score=63.37 Aligned_cols=80 Identities=23% Similarity=0.387 Sum_probs=54.6
Q ss_pred CCeEEEEeC---Ce-eEEEEccccccccCCCceEEecCCceEEEEEcCCCCHHHH-------------------------
Q 002298 210 PPKLYSIED---SQ-VKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEER------------------------- 260 (940)
Q Consensus 210 ~~rLy~v~~---G~-l~~~e~~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~eR------------------------- 260 (940)
-|+||.+.+ .. ..+..+.++-+-|.++.+||||+|..||||+|+.++.+--
T Consensus 620 yP~L~~~h~~~~~~~~~P~~v~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~~l~dlFgv~~~~~i~~~~~~lp~~~~~ 699 (766)
T 3eh2_A 620 YPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNP 699 (766)
T ss_dssp SCEEEECSSCCCSCC--CCCBCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSCSSGGGSCTTCCSCCCCSSH
T ss_pred hheEEEeecCCcccccCCCCcCCcHHHcCCCcEEEEEcCcEEEEEecCCCCHHHHHHHcCCCchhhcCcccccCCCCCCH
Confidence 589998852 11 1222234888899999999999999999999999876522
Q ss_pred -HHHHHHHHHHHHhcCCCCCceEEEecCCCCC
Q 002298 261 -KAASQAAEEFISSQNRPKSIRITRVIQGYET 291 (940)
Q Consensus 261 -k~A~~~A~~yl~~~~Rp~~t~I~~V~eG~Ep 291 (940)
..-+....+.++. .|+...++.+|.+| .+
T Consensus 700 ~s~~vr~ii~~lr~-~~~~~~~l~ivr~~-~~ 729 (766)
T 3eh2_A 700 LSKKVRGLIDSLRA-QRSRYMKLTVVKQE-DK 729 (766)
T ss_dssp HHHHHHHHHHHHHT-TSSSCCEEEEEESS-SS
T ss_pred HHHHHHHHHHHHHH-hCCCCceEEEEeCC-CC
Confidence 2222223334444 46777899999987 44
No 36
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=93.77 E-value=0.079 Score=66.13 Aligned_cols=53 Identities=15% Similarity=0.338 Sum_probs=40.1
Q ss_pred CCCeeEEEEec---CC------------eeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCCCHH
Q 002298 578 RDPHLFTFSFN---KG------------KFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSK 630 (940)
Q Consensus 578 ~~prLF~~S~~---~G------------~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a~~~ 630 (940)
..|+||.+++. .| .+.+-+-.+.+-+-|+++.+||||+|..||+|+|+.+++.
T Consensus 752 iyP~L~s~h~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lWvG~~~~p~ 819 (926)
T 1m2v_B 752 IYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPA 819 (926)
T ss_dssp HSCEEEETTTCCSSCSCC---------CCCCCCCCBCSCSTTCCTTCEEEEECSSEEEEEECTTCCSG
T ss_pred ccCeEEEeccCcccccccccccccccccccccCCcccCcHHHhccCCEEEEECCCEEEEEecCCCCHH
Confidence 67999987642 12 2222233578888899999999999999999999998753
No 37
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=92.56 E-value=0.27 Score=60.32 Aligned_cols=78 Identities=27% Similarity=0.385 Sum_probs=53.5
Q ss_pred CCeEEEEeC----CeeEEEEccccccccCCCceEEecCCceEEEEEcCCCCHHHHHH-----------------------
Q 002298 210 PPKLYSIED----SQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQVEERKA----------------------- 262 (940)
Q Consensus 210 ~~rLy~v~~----G~l~~~e~~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~eRk~----------------------- 262 (940)
-|+||.+.+ ....+.-+.++.+-|.++.+||||+|..||||+|+.+...--+.
T Consensus 624 yP~L~~~h~l~~~~~~~P~~v~ls~~~l~~~giyLLD~g~~i~lw~G~~v~~~l~~~lfgv~~~~~i~~~~~~lp~~~~~ 703 (770)
T 3efo_B 624 YPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNP 703 (770)
T ss_dssp SCEEEECTTCCSSSCSCCCCCCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHHHHHHHSSSSGGGCCTTCCSCCCCCSS
T ss_pred ccceEEEeccccccccCCCCcCCcHHHcCCCcEEEEECCcEEEEEecCCCCHHHHHHhcCCCchhhcCcccccCCCCCCH
Confidence 588998841 11112223488899999999999999999999999987654321
Q ss_pred ---HHHHHHHHHHhcCCCCCceEEEecCC
Q 002298 263 ---ASQAAEEFISSQNRPKSIRITRVIQG 288 (940)
Q Consensus 263 ---A~~~A~~yl~~~~Rp~~t~I~~V~eG 288 (940)
-+....+.++. .|+...++.+|.+|
T Consensus 704 ~s~~vr~ii~~lr~-~r~~~~~l~ivr~~ 731 (770)
T 3efo_B 704 YSQQLRMIMGIIQQ-KRPYSMKLTIVKQR 731 (770)
T ss_dssp HHHHHHHHHHHHHT-TCSSCCEEEEEEST
T ss_pred HHHHHHHHHHHHHH-hCCCCccEEEEeCC
Confidence 12222233333 46777899999988
No 38
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=92.00 E-value=0.35 Score=59.14 Aligned_cols=31 Identities=32% Similarity=0.661 Sum_probs=28.2
Q ss_pred ccccccCCCceEEecCCceEEEEEcCCCCHH
Q 002298 228 LSKSMLENNKCYLLDRGSEVFVWVGRVTQVE 258 (940)
Q Consensus 228 l~q~~L~s~~vyILD~g~eIyVWiGk~as~~ 258 (940)
++-+-|.++.+||||+|..||+|+|+.++.+
T Consensus 631 ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~ 661 (751)
T 3eh1_A 631 LSAEKLTREGAFLMDCGSVFYIWVGKGCDNN 661 (751)
T ss_dssp SSGGGCCTTSEEEEECSSEEEEEECTTCCHH
T ss_pred CCHHHcccCCEEEEECCCEEEEEECCCCCHH
Confidence 5888999999999999999999999997754
No 39
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=88.85 E-value=0.57 Score=57.49 Aligned_cols=46 Identities=26% Similarity=0.644 Sum_probs=37.3
Q ss_pred CCCeeEEEEecCCeeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCC
Q 002298 578 RDPHLFTFSFNKGKFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSV 627 (940)
Q Consensus 578 ~~prLF~~S~~~G~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a 627 (940)
..|+||.+++. |. -+-...+.+-|.++.|||||++..||||+|..+
T Consensus 623 iyP~L~~~~~~-~~---P~~v~ls~~~l~~~gi~LLD~g~~i~i~~G~~v 668 (769)
T 2nut_A 623 IQPILYAYSFS-GP---PEPVLLDSSSILADRILLMDTFFQILIYHGETI 668 (769)
T ss_dssp HSCEEEEECSS-SS---CEECCSSGGGCCTTCEEEEECSSEEEEEECHHH
T ss_pred hcCEEEeccCC-CC---CCceeCCHHHccCCCEEEEECCCEEEEEECCcc
Confidence 67999988764 21 223578888999999999999999999999754
No 40
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=88.46 E-value=0.58 Score=57.76 Aligned_cols=32 Identities=31% Similarity=0.680 Sum_probs=29.1
Q ss_pred cccccccCCCceEEecCCceEEEEEcCCCCHH
Q 002298 227 ELSKSMLENNKCYLLDRGSEVFVWVGRVTQVE 258 (940)
Q Consensus 227 ~l~q~~L~s~~vyILD~g~eIyVWiGk~as~~ 258 (940)
.|+.+.|+++.+||||+|..||+|+|+.++.+
T Consensus 672 ~Ls~~~l~~~g~yLld~G~~i~lwvg~~~~~~ 703 (810)
T 1pcx_A 672 NATSSLFERYGLYLIDNGNELFLWMGGDAVPA 703 (810)
T ss_dssp CSSTTSCCTTCEEEEECSSEEEEEECTTCCHH
T ss_pred cCCHHHhCcCCEEEEECCCEEEEEeCCCCCHH
Confidence 38889999999999999999999999998754
No 41
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=88.35 E-value=0.72 Score=56.63 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=54.3
Q ss_pred CCeEEEEe-CCeeEEEEccccccccCCCceEEecCCceEEEEEcCCCCH---------H---HHHH----HHHHHHHHHH
Q 002298 210 PPKLYSIE-DSQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQV---------E---ERKA----ASQAAEEFIS 272 (940)
Q Consensus 210 ~~rLy~v~-~G~l~~~e~~l~q~~L~s~~vyILD~g~eIyVWiGk~as~---------~---eRk~----A~~~A~~yl~ 272 (940)
.|+||.+. .|. +..+.|+-+-|.++.+||||+|..||||+|+.+.. . ..+. ....|+++++
T Consensus 624 yP~L~~~~~~~~--P~~v~ls~~~l~~~gi~LLD~g~~i~i~~G~~v~~w~~~~~~~~p~~~~~~~~l~~p~~~a~~i~~ 701 (769)
T 2nut_A 624 QPILYAYSFSGP--PEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILH 701 (769)
T ss_dssp SCEEEEECSSSS--CEECCSSGGGCCTTCEEEEECSSEEEEEECHHHHHHHHHTTTTSGGGHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEeccCCCC--CCceeCCHHHccCCCEEEEECCCEEEEEECCcchHHHhCCCCCCchhhhHHHHHHhHHHHHHHHHh
Confidence 48999887 443 33345899999999999999999999999986531 1 1122 2235555554
Q ss_pred hcCCCCCceEEEecCC-CCChhhHhcc
Q 002298 273 SQNRPKSIRITRVIQG-YETYAFKSNF 298 (940)
Q Consensus 273 ~~~Rp~~t~I~~V~eG-~Ep~~FK~~F 298 (940)
. |.....+..+.|| .+-..|+++-
T Consensus 702 ~--R~p~Pr~i~~~~g~sqaRfl~skl 726 (769)
T 2nut_A 702 S--RFPMPRYIDTEHGGSQARFLLSKV 726 (769)
T ss_dssp H--SSSCCEEEEEETTCSTTHHHHHHC
T ss_pred c--CCCCCeEEEEcCCCcHHHHHHHhc
Confidence 3 5332456666665 4445555554
No 42
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=87.65 E-value=0.92 Score=55.68 Aligned_cols=46 Identities=22% Similarity=0.395 Sum_probs=37.4
Q ss_pred CCCeeEEEEecCCeeeEEeecccCccCCCCCCEEEEeCCCEEEEEEcCCC
Q 002298 578 RDPHLFTFSFNKGKFEVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSV 627 (940)
Q Consensus 578 ~~prLF~~S~~~G~~~v~EI~~F~QdDL~~ddv~ILD~~~eIfVWiG~~a 627 (940)
..|+||.++.. |. -+-...+.+-|.++.|||||++..||||+|..+
T Consensus 625 iyP~L~~~~~~-~~---P~~v~Ls~~~l~~~gi~LLD~g~~i~i~~G~~v 670 (768)
T 1m2o_A 625 IQPTLTSFSME-DD---PQPVLLDSISVKPNTILLLDTFFFILIYHGEQI 670 (768)
T ss_dssp HSCEEEEECSS-SC---CEECCSBGGGCCTTCEEEEECSSEEEEEECHHH
T ss_pred hCCeEEEecCC-CC---CcceeCcHHHcCCCCEEEEECCCEEEEEECCcc
Confidence 67999988864 31 233578888999999999999999999999754
No 43
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=87.30 E-value=1.3 Score=54.32 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=36.5
Q ss_pred CCeEEEEe-CCeeEEEEccccccccCCCceEEecCCceEEEEEcCCCC
Q 002298 210 PPKLYSIE-DSQVKIVEGELSKSMLENNKCYLLDRGSEVFVWVGRVTQ 256 (940)
Q Consensus 210 ~~rLy~v~-~G~l~~~e~~l~q~~L~s~~vyILD~g~eIyVWiGk~as 256 (940)
.|+||.+. +|. +..+.|+-+-|.++.+||||+|..||||+|+...
T Consensus 626 yP~L~~~~~~~~--P~~v~Ls~~~l~~~gi~LLD~g~~i~i~~G~~v~ 671 (768)
T 1m2o_A 626 QPTLTSFSMEDD--PQPVLLDSISVKPNTILLLDTFFFILIYHGEQIA 671 (768)
T ss_dssp SCEEEEECSSSC--CEECCSBGGGCCTTCEEEEECSSEEEEEECHHHH
T ss_pred CCeEEEecCCCC--CcceeCcHHHcCCCCEEEEECCCEEEEEECCcch
Confidence 48999886 443 3334589999999999999999999999998653
No 44
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=86.01 E-value=0.88 Score=56.83 Aligned_cols=31 Identities=32% Similarity=0.702 Sum_probs=28.3
Q ss_pred cccccccCCCceEEecCCceEEEEEcCCCCH
Q 002298 227 ELSKSMLENNKCYLLDRGSEVFVWVGRVTQV 257 (940)
Q Consensus 227 ~l~q~~L~s~~vyILD~g~eIyVWiGk~as~ 257 (940)
.|+-+.|+++.+||||+|..||+|+|+.++.
T Consensus 788 ~Ls~~~l~~~g~yLld~G~~i~lWvG~~~~p 818 (926)
T 1m2v_B 788 NATSSLFERYGLYLIDNGNELFLWMGGDAVP 818 (926)
T ss_dssp CSCSTTCCTTCEEEEECSSEEEEEECTTCCS
T ss_pred cCcHHHhccCCEEEEECCCEEEEEecCCCCH
Confidence 3888899999999999999999999999763
No 45
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=63.70 E-value=17 Score=34.83 Aligned_cols=61 Identities=13% Similarity=0.279 Sum_probs=45.8
Q ss_pred cEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHH
Q 002298 3 DCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDK 66 (940)
Q Consensus 3 D~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~ 66 (940)
-||+++........+..+.+..|+|..++.-.++..|..-..|-..|+| +++ ++|..+...
T Consensus 69 ~~Y~~~r~~~~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g--~~~-ei~at~~~e 129 (146)
T 1x67_A 69 VMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKG--AHV-TINARAEED 129 (146)
T ss_dssp EEEEEEEEECSSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTT--EEE-EECCCSGGG
T ss_pred eEEEEEEEEcCCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCC--cEE-EEEeCChHH
Confidence 4788776543223345677778999999999999999999999999987 333 678766654
No 46
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=55.48 E-value=28 Score=33.35 Aligned_cols=65 Identities=17% Similarity=0.277 Sum_probs=47.5
Q ss_pred eeeeCcEEEEEEeee-cCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEEEeecCCCCH
Q 002298 371 KFYSGDCYIVLYTYH-SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPP 438 (940)
Q Consensus 371 ~FysgDcYIVlytY~-~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~Rv~QGkEp~ 438 (940)
+|-.++|.-++|.+. +...+.++++..|.|..+....+...|..-..|.+.|+|- ++ .+|..++.
T Consensus 63 ~L~~~~~~Y~~~r~~~~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~--~~-ei~at~~~ 128 (146)
T 1x67_A 63 ELNSGKVMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGA--HV-TINARAEE 128 (146)
T ss_dssp HCCTTSEEEEEEEEECSSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTE--EE-EECCCSGG
T ss_pred hCCCCceEEEEEEEEcCCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCCc--EE-EEEeCChH
Confidence 445677877777774 3345678999999999999999998888777888888764 33 45555543
No 47
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=50.80 E-value=35 Score=32.32 Aligned_cols=61 Identities=15% Similarity=0.148 Sum_probs=43.0
Q ss_pred cEEEEeeecc-CCCC-C--ccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHH
Q 002298 3 DCYIVLQTTP-GKGG-A--YLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDK 66 (940)
Q Consensus 3 D~YIVL~t~~-~~~~-~--~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~ 66 (940)
-+|+++.... ...+ + ..+.+.+|++..++.-++..-|..-..|-..|+|-.+ ++|..+...
T Consensus 62 ~rY~~~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~---~i~a~d~~e 126 (143)
T 1cfy_A 62 CLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVST---DVQGTDFSE 126 (143)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCE---EEEESSGGG
T ss_pred cEEEEEEeeeecCCCcccccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceE---EEEeCChHH
Confidence 4788876432 2222 2 4566778999999999999888888888899977544 556655543
No 48
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=43.72 E-value=51 Score=31.21 Aligned_cols=64 Identities=16% Similarity=0.335 Sum_probs=45.4
Q ss_pred CcEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHH
Q 002298 2 GDCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDK 66 (940)
Q Consensus 2 GD~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~ 66 (940)
..||+|+........+..+.+.+|++..++.-.+..-|.--..|-..|+|..+. .++|..+...
T Consensus 65 ~~rY~~~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~-~~i~atd~~e 128 (142)
T 1m4j_A 65 QPCYVLFRLDSQNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIK-DEVFGTVKED 128 (142)
T ss_dssp CCEEEEEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEE-EEEEESSHHH
T ss_pred CceEEEEEcCcCCCCCceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCceeE-EEEEeCChHH
Confidence 358998864322223356777889999999999888777777888999986652 2567766644
No 49
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=43.55 E-value=67 Score=30.22 Aligned_cols=58 Identities=17% Similarity=0.156 Sum_probs=40.0
Q ss_pred eeeeCcEEEEEEeee-cCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHh-hcCCCCeE
Q 002298 371 KFYSGDCYIVLYTYH-SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCN-SLKGRPVQ 428 (940)
Q Consensus 371 ~FysgDcYIVlytY~-~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~-~l~g~~vq 428 (940)
.|-.++|--++|.|. .+..+..+++.+|.|..+...++..-|..-..|.+ .++|-.++
T Consensus 58 ~l~~~~~rY~~~~~~~~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~~ 117 (141)
T 1hqz_1 58 LFDETKVQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQ 117 (141)
T ss_dssp CCCTTSCEEEEEEECCTTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEE
T ss_pred hCCCCceEEEEEEEecCCCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEEE
Confidence 344556666667773 23345788899999999999999877765566665 67655443
No 50
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=41.66 E-value=43 Score=31.90 Aligned_cols=49 Identities=18% Similarity=0.573 Sum_probs=33.2
Q ss_pred cEEEEE-Eeee-cCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCC
Q 002298 376 DCYIVL-YTYH-SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKG 424 (940)
Q Consensus 376 DcYIVl-ytY~-~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g 424 (940)
-||++. |.|. .+..+...++.+|.+..+...++..-|..-..|.+.++|
T Consensus 62 prY~~y~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~ 112 (144)
T 2kvk_A 62 PCYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEG 112 (144)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT
T ss_pred ceEEEEEeeeccCCCCcccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC
Confidence 356543 4443 223345678889999999999998766655666777776
No 51
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=41.08 E-value=65 Score=30.34 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=40.5
Q ss_pred cEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHH-HhCCCceEEEEeccCCcH
Q 002298 3 DCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDA-VLGGRAVQHRELQGHESD 65 (940)
Q Consensus 3 D~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~-~Lgg~~vq~RevQG~Es~ 65 (940)
-+|+++...........+.+.+|+|..++.-++..-|-.-..|-. .|+|-.+ ++|..+..
T Consensus 64 ~rY~~~~~~~~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~---~i~a~~~~ 124 (141)
T 1hqz_1 64 VQYGLARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHV---QVTARDED 124 (141)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSE---EEEESSGG
T ss_pred eEEEEEEEecCCCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEE---EEEECChH
Confidence 478877643221233567778899999999888887777777776 8876554 44554443
No 52
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=40.77 E-value=55 Score=30.63 Aligned_cols=63 Identities=16% Similarity=0.319 Sum_probs=44.6
Q ss_pred cEEEEeeeccCCCCCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHH
Q 002298 3 DCYIVLQTTPGKGGAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDK 66 (940)
Q Consensus 3 D~YIVL~t~~~~~~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~ 66 (940)
.||+|+........+....+.+|++..++.-.+..-|.--..|-..|+|..+. .++|..+...
T Consensus 63 prY~v~~~~~~~~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~-~~i~atd~~e 125 (134)
T 2vac_A 63 PCYLLYRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIK-DELFGTVKDD 125 (134)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEE-EEEEESSHHH
T ss_pred CEEEEEECCcCCCCCceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCeee-EEEEeCChHH
Confidence 58998764322223356777889999999999887777777888999986652 2567666544
No 53
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=39.09 E-value=63 Score=30.67 Aligned_cols=60 Identities=5% Similarity=0.097 Sum_probs=45.0
Q ss_pred ceeeeCcEEEEEEeee---cCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEE
Q 002298 370 GKFYSGDCYIVLYTYH---SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQG 429 (940)
Q Consensus 370 G~FysgDcYIVlytY~---~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~ 429 (940)
.+|-.++|.-.+|.+. +...+.+.++..|.|..+....++..+.....+.+.|+|-.+++
T Consensus 49 ~~L~~~~~~Ya~~r~~~~~~~~~~~K~vfI~W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~i 111 (141)
T 1t3y_A 49 QQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEF 111 (141)
T ss_dssp HHCCTTCEEEEEEEEEECSGGGCEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTTSCCCSEEE
T ss_pred hhCCCCceEEEEEEEEecCCCCceeeEEEEEECCCCCCHHHhhhHHHHHHHHHHHhcccEEEE
Confidence 3455777876676663 12346788899999999999999998888888888887765544
No 54
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=38.38 E-value=77 Score=30.90 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=43.3
Q ss_pred CcEEEEeeec-cCCCC-CccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHH
Q 002298 2 GDCYIVLQTT-PGKGG-AYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKF 67 (940)
Q Consensus 2 GD~YIVL~t~-~~~~~-~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~F 67 (940)
..||+|+... ...++ +..+.+.+|++..++.-.+..-|.--..|-..|+|-.+ ++|..+...+
T Consensus 79 ~prY~vy~~~~~~~~~~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~---~i~atd~~el 143 (166)
T 1tvj_A 79 DCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKH---EWQVNGLDDI 143 (166)
T ss_dssp SCEEEEEEEEEEESSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCC---EEEESSGGGT
T ss_pred CcEEEEEeccccCCCCCccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeE---EEEECChHHc
Confidence 3589987642 12222 34566778999999999888777777778889987332 5676666554
No 55
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=33.70 E-value=50 Score=31.08 Aligned_cols=60 Identities=15% Similarity=0.061 Sum_probs=41.6
Q ss_pred cEEEEeeec-cCCCC--CccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcH
Q 002298 3 DCYIVLQTT-PGKGG--AYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESD 65 (940)
Q Consensus 3 D~YIVL~t~-~~~~~--~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~ 65 (940)
.+|+++... ....+ ...+.+.+|++..++.-++..-|..-..|-..|+|..+ ++|..+..
T Consensus 65 ~rY~~~~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v---~i~a~d~~ 127 (139)
T 1f7s_A 65 CRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV---ELQATDPT 127 (139)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCE---EEEECCTT
T ss_pred ceEEEEEeeeeccccCcccCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEE---EEEECChH
Confidence 358887642 22223 34566778999999999998877777888888987655 45555443
No 56
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=32.17 E-value=72 Score=29.81 Aligned_cols=62 Identities=10% Similarity=0.016 Sum_probs=41.8
Q ss_pred cEEEEeeecc-CCCC-CccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHHH
Q 002298 3 DCYIVLQTTP-GKGG-AYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDKF 67 (940)
Q Consensus 3 D~YIVL~t~~-~~~~-~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~F 67 (940)
-+|+++.... ..++ .....+.+|++..++.-++..-|..-..|-..|+|- +.++|..+...+
T Consensus 62 ~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~---~~~i~a~d~~el 125 (137)
T 2i2q_A 62 CRYAIYDFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGI---GTDIQATDFSEV 125 (137)
T ss_dssp CEEEEEEEEECSSSSCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCC---CEEEEECCCC--
T ss_pred ceEEEEEeeeecCCCCccCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCc---eEEEEECChHHc
Confidence 4788876422 2222 245677789999999999988887777788888764 336666665543
No 57
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=31.89 E-value=1.1e+02 Score=28.71 Aligned_cols=57 Identities=14% Similarity=0.351 Sum_probs=38.3
Q ss_pred eeeeCcEEEEEEeee--cCCC--CcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 371 KFYSGDCYIVLYTYH--SGDR--KEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 371 ~FysgDcYIVlytY~--~~~~--~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
.|-.++|--++|.|. ..++ +..+++.+|.|..+...++..-|..-..|.+.++|-.+
T Consensus 59 ~L~~~~~rY~~~~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v 119 (139)
T 1f7s_A 59 CLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV 119 (139)
T ss_dssp TSCTTSCEEEEEEEEEECTTSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred hCCCCCceEEEEEeeeeccccCcccCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEE
Confidence 345667733445552 1222 45778889999999999998766666667777776544
No 58
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=31.85 E-value=83 Score=30.67 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=42.0
Q ss_pred eeeCcEEEEEEeee---cCCCCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEEEeecCCCCHH
Q 002298 372 FYSGDCYIVLYTYH---SGDRKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQGRIFQGREPPQ 439 (940)
Q Consensus 372 FysgDcYIVlytY~---~~~~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~Rv~QGkEp~~ 439 (940)
+-.++|--++|.|. ..+.+...++.+|.+..|....+..-|.--..|.+.++|-.. ++|..++..
T Consensus 75 L~~~~prY~vy~~~~~~~~~~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~---~i~atd~~e 142 (166)
T 1tvj_A 75 LPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKH---EWQVNGLDD 142 (166)
T ss_dssp CCTTSCEEEEEEEEEEESSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCC---EEEESSGGG
T ss_pred CCCCCcEEEEEeccccCCCCCccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeE---EEEECChHH
Confidence 44455655566653 222345778889999999999997766655677788877443 344444433
No 59
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=31.41 E-value=75 Score=30.19 Aligned_cols=58 Identities=19% Similarity=0.129 Sum_probs=40.7
Q ss_pred cEEEEeeec-cCCCCC--ccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCC
Q 002298 3 DCYIVLQTT-PGKGGA--YLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHE 63 (940)
Q Consensus 3 D~YIVL~t~-~~~~~~--~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~E 63 (940)
-||+++... ....|+ ..+.+.+|++..++.-++..-|..-..|-..|+|-.+ ++|..+
T Consensus 72 prY~~y~~~~~~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~---~i~atd 132 (148)
T 2xfa_A 72 CRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFK---SLEITC 132 (148)
T ss_dssp CEEEEEEEEECCSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSE---EEEECS
T ss_pred cEEEEEecccccCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeE---EEEEEc
Confidence 589987642 223332 3456678999999999998888777788888876554 555554
No 60
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=29.90 E-value=1.3e+02 Score=27.97 Aligned_cols=54 Identities=17% Similarity=0.332 Sum_probs=36.7
Q ss_pred eCcEEEEEEeee--cCCC-CcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 374 SGDCYIVLYTYH--SGDR-KEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 374 sgDcYIVlytY~--~~~~-~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
.++|--++|.|. ..++ +...++.+|.|..+...++..-|..-..|.+.++|-.+
T Consensus 57 ~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~ 113 (137)
T 1cnu_A 57 ERDCRYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQV 113 (137)
T ss_dssp TTSCEEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred CCCceEEEEEeeeecCCCCccCEEEEEECCCCCChHHheehHHhHHHHHHHhcCceE
Confidence 445544455553 1222 46788889999999999998777666677777866543
No 61
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=29.87 E-value=1.4e+02 Score=27.94 Aligned_cols=56 Identities=11% Similarity=0.332 Sum_probs=38.2
Q ss_pred eeeCcEEEEEEeee-c-CCC---CcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCe
Q 002298 372 FYSGDCYIVLYTYH-S-GDR---KEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPV 427 (940)
Q Consensus 372 FysgDcYIVlytY~-~-~~~---~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~v 427 (940)
|-.++|--++|.|. . .++ +..+++.+|.|..+...++..-|..-..|.+.++|-.+
T Consensus 57 L~~~~~rY~~~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~ 117 (143)
T 1cfy_A 57 LPENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVST 117 (143)
T ss_dssp SCTTCCEEEEEEEEEECSSSCCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred CCCCCcEEEEEEeeeecCCCcccccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceE
Confidence 33455555566653 1 222 35778889999999999998877766677777866544
No 62
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=29.53 E-value=1.6e+02 Score=27.40 Aligned_cols=52 Identities=13% Similarity=0.378 Sum_probs=35.7
Q ss_pred eCcEEEEEEeee-c-CC-CCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCC
Q 002298 374 SGDCYIVLYTYH-S-GD-RKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGR 425 (940)
Q Consensus 374 sgDcYIVlytY~-~-~~-~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~ 425 (940)
.++|--++|.|. . .+ .+...++.+|.+..+...++..-|..-..|.+.++|-
T Consensus 59 ~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~ 113 (137)
T 2i2q_A 59 EKDCRYAIYDFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGI 113 (137)
T ss_dssp SSSCEEEEEEEEECSSSSCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCC
T ss_pred CcCceEEEEEeeeecCCCCccCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCc
Confidence 455555555653 1 22 2467888899999999999987776566666777654
No 63
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=28.87 E-value=1e+02 Score=29.24 Aligned_cols=59 Identities=17% Similarity=0.256 Sum_probs=40.8
Q ss_pred cEEEEeee-ccCCCCC-ccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcH
Q 002298 3 DCYIVLQT-TPGKGGA-YLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESD 65 (940)
Q Consensus 3 D~YIVL~t-~~~~~~~-~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~ 65 (940)
.||+++.. +...++. -...+.+|++.+++.-++..-|..-..|-..|+| +.++|.....
T Consensus 62 prY~~y~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~----~~~i~a~d~~ 122 (144)
T 2kvk_A 62 PCYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEG----YLPIQANDES 122 (144)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT----EEEEEESSGG
T ss_pred ceEEEEEeeeccCCCCcccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC----EEEEEECChH
Confidence 47887743 2222222 2356678999999999998877777778889987 3467766544
No 64
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=28.13 E-value=1.4e+02 Score=27.81 Aligned_cols=60 Identities=13% Similarity=0.147 Sum_probs=41.8
Q ss_pred cEEEEeeecc-CCCC-CccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcH
Q 002298 3 DCYIVLQTTP-GKGG-AYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESD 65 (940)
Q Consensus 3 D~YIVL~t~~-~~~~-~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~ 65 (940)
-+|+++.... ...+ ...+.+.+|++..++.-++..-|..-..|-..|+|-. .++|..+..
T Consensus 60 ~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~---~~i~a~~~~ 121 (137)
T 1cnu_A 60 CRYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQ---VEVQATDAA 121 (137)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCC---EEEEECSTT
T ss_pred ceEEEEEeeeecCCCCccCEEEEEECCCCCChHHheehHHhHHHHHHHhcCce---EEEEECChH
Confidence 4788876422 2222 2456778899999999999888888888889997653 355655543
No 65
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=26.70 E-value=1.7e+02 Score=27.57 Aligned_cols=57 Identities=7% Similarity=0.195 Sum_probs=38.3
Q ss_pred eeCcEEEEEEeee--cCCC--CcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCCCeEE
Q 002298 373 YSGDCYIVLYTYH--SGDR--KEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGRPVQG 429 (940)
Q Consensus 373 ysgDcYIVlytY~--~~~~--~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~~vq~ 429 (940)
-.++|--++|.|. ..+| +...++.+|.+..|...++..-|..-..|.+.++|-.+.+
T Consensus 68 ~~~~prY~~y~~~~~~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~i 128 (148)
T 2xfa_A 68 KNTECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFKSL 128 (148)
T ss_dssp BTTBCEEEEEEEEECCSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSEEE
T ss_pred CcCCcEEEEEecccccCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeEEE
Confidence 3455555556663 1223 4577888999999999999877766666777786665533
No 66
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=21.35 E-value=1e+02 Score=29.14 Aligned_cols=52 Identities=12% Similarity=0.301 Sum_probs=33.6
Q ss_pred eCcEEEEEEeee-cCC--CCcceEEEEEcCCCCChHhHHHHHHHHHHHHhhcCCC
Q 002298 374 SGDCYIVLYTYH-SGD--RKEDYFLCCWFGKDSIEEDQKMATRLANTMCNSLKGR 425 (940)
Q Consensus 374 sgDcYIVlytY~-~~~--~~~~~~iy~W~G~~ss~de~~~aa~la~~l~~~l~g~ 425 (940)
.++|--++|.|. ... .+...++.+|.|..+...++..-|..-..|.+.++|-
T Consensus 59 ~~~~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~ 113 (144)
T 2kd5_A 59 TEKPCYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEGY 113 (144)
T ss_dssp CSSCEEEEEEEEEESSSCEEEEEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS
T ss_pred ccCcEEEEEEEEecCCCCCccCEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe
Confidence 444444444442 222 3567888899999999999987666555566666654
No 67
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=20.67 E-value=45 Score=31.67 Aligned_cols=60 Identities=17% Similarity=0.238 Sum_probs=40.8
Q ss_pred cEEEEeee-ccCCC-CCccEEEEEEccCCCChhhHhHHHHHHHHHHHHhCCCceEEEEeccCCcHH
Q 002298 3 DCYIVLQT-TPGKG-GAYLYDIHFWIGKDTSQDEAGTAAIKTVELDAVLGGRAVQHRELQGHESDK 66 (940)
Q Consensus 3 D~YIVL~t-~~~~~-~~~~~~Ih~WlG~~ss~de~g~AA~~aveLd~~Lgg~~vq~RevQG~Es~~ 66 (940)
-+|+++.. +...+ ....+.+.+|+|..++.-++..-|..-..|-..|+|- .++|..+...
T Consensus 62 ~rY~~~~~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~----~~i~a~d~~e 123 (144)
T 2kd5_A 62 PCYVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEGY----LPIQANDESG 123 (144)
T ss_dssp CEEEEEEEEEESSSCEEEEEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS----EEEEESSSSS
T ss_pred cEEEEEEEEecCCCCCccCEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe----EEEEECChHH
Confidence 48888763 22222 2345667789999999999887777777777788874 5556555443
Done!