Your job contains 1 sequence.
>002301
MKLSGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVN
SDPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQ
VPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNG
IAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHV
AQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRW
RNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRL
DSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNY
SGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSF
REFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVYD
AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFL
AVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRLVLIIWLFVV
LIINSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDESRL
VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPR
DSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLDVDRLQLKSFSGLYLLCGL
ACLLALFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHV
ERTSYRSEDEMSSCNSNRKHIELSSNLSLDSDTRNCNGSS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002301
(940 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081805 - symbol:GLR3.6 "glutamate receptor 3.... 2820 1.1e-293 1
TAIR|locus:2206095 - symbol:GLR3.3 "glutamate receptor 3.... 2674 3.2e-278 1
TAIR|locus:2122128 - symbol:GLUR2 "glutamate receptor 2" ... 2500 8.9e-260 1
TAIR|locus:2207165 - symbol:GLR3.4 "AT1G05200" species:37... 2381 3.6e-247 1
TAIR|locus:2062586 - symbol:GLR5 "glutamate receptor 5" s... 1890 3.9e-195 1
TAIR|locus:2047251 - symbol:GLR2.3 "glutamate receptor 2.... 1193 2.4e-123 2
TAIR|locus:2066086 - symbol:GLR2.8 "glutamate receptor 2.... 1206 1.2e-122 1
TAIR|locus:2047256 - symbol:GLR2.2 "glutamate receptor 2.... 1203 2.4e-122 1
TAIR|locus:2181196 - symbol:GLR2.1 "glutamate receptor 2.... 1158 1.4e-117 1
TAIR|locus:2066107 - symbol:GLR2.7 "glutamate receptor 2.... 1051 3.1e-106 1
TAIR|locus:2066148 - symbol:GLR2.9 "glutamate receptor 2.... 854 2.4e-85 1
TAIR|locus:2166001 - symbol:ATGLR1.2 species:3702 "Arabid... 546 2.0e-77 2
TAIR|locus:2166006 - symbol:GLR1.3 "glutamate receptor 1.... 549 1.4e-74 2
TAIR|locus:2079681 - symbol:GLR1.4 "glutamate receptor 1.... 534 4.2e-74 2
TAIR|locus:2102975 - symbol:GLR1.1 "glutamate receptor 1.... 353 3.5e-53 3
FB|FBgn0038837 - symbol:CG3822 species:7227 "Drosophila m... 162 8.6e-29 4
UNIPROTKB|F1P5Y1 - symbol:GRIA1 "Uncharacterized protein"... 169 3.7e-28 3
RGD|2736 - symbol:Grin1 "glutamate receptor, ionotropic, ... 191 3.7e-28 4
UNIPROTKB|P35439 - symbol:Grin1 "Glutamate receptor ionot... 191 3.7e-28 4
UNIPROTKB|F1NW92 - symbol:GRIA1 "Uncharacterized protein"... 172 4.5e-28 3
MGI|MGI:95819 - symbol:Grin1 "glutamate receptor, ionotro... 191 4.7e-28 4
UNIPROTKB|A2AVK2 - symbol:GRIN1 "Glutamate receptor ionot... 191 6.3e-28 4
UNIPROTKB|Q05586 - symbol:GRIN1 "Glutamate receptor ionot... 191 7.5e-28 4
UNIPROTKB|B7Z9G9 - symbol:GRIA1 "cDNA, FLJ78833, highly s... 165 2.7e-27 3
UNIPROTKB|F1RYR0 - symbol:GRIK5 "Uncharacterized protein"... 165 4.0e-27 4
UNIPROTKB|F1PDR1 - symbol:GRIA1 "Uncharacterized protein"... 165 4.3e-27 3
UNIPROTKB|F1PDP9 - symbol:GRIA1 "Uncharacterized protein"... 165 6.8e-27 3
UNIPROTKB|P42261 - symbol:GRIA1 "Glutamate receptor 1" sp... 165 6.8e-27 3
UNIPROTKB|Q38PU8 - symbol:GRIA1 "Glutamate receptor 1" sp... 165 6.8e-27 3
UNIPROTKB|E7ESV8 - symbol:GRIA1 "Glutamate receptor 1" sp... 165 7.1e-27 3
UNIPROTKB|F1N3G8 - symbol:GRIA1 "Uncharacterized protein"... 163 8.2e-27 3
UNIPROTKB|G3V914 - symbol:Gria2 "Glutamate receptor 2" sp... 155 8.7e-27 3
MGI|MGI:95808 - symbol:Gria1 "glutamate receptor, ionotro... 159 1.2e-26 3
UNIPROTKB|F1PE26 - symbol:GRIA2 "Uncharacterized protein"... 153 1.2e-26 3
UNIPROTKB|F1MK58 - symbol:GRIA2 "Uncharacterized protein"... 153 1.4e-26 3
UNIPROTKB|A8MT92 - symbol:GRIA2 "Glutamate receptor 2" sp... 152 1.5e-26 3
UNIPROTKB|F1LPK4 - symbol:Gria2 "Glutamate receptor 2" sp... 155 3.4e-26 3
MGI|MGI:95809 - symbol:Gria2 "glutamate receptor, ionotro... 155 3.6e-26 3
RGD|61862 - symbol:Gria2 "glutamate receptor, ionotropic,... 155 3.6e-26 3
UNIPROTKB|P19491 - symbol:Gria2 "Glutamate receptor 2" sp... 155 3.6e-26 3
UNIPROTKB|F1LNE4 - symbol:Gria2 "Glutamate receptor 2" sp... 153 4.1e-26 3
UNIPROTKB|G3V938 - symbol:Gria2 "Glutamate receptor, iono... 155 4.6e-26 3
RGD|621531 - symbol:Gria1 "glutamate receptor, ionotropic... 156 6.4e-26 3
UNIPROTKB|P19490 - symbol:Gria1 "Glutamate receptor 1" sp... 156 6.4e-26 3
UNIPROTKB|I3LHM1 - symbol:GRIA2 "Uncharacterized protein"... 153 6.7e-26 3
UNIPROTKB|F1MBY1 - symbol:GRIA2 "Uncharacterized protein"... 153 7.6e-26 3
UNIPROTKB|Q38PU7 - symbol:GRIA2 "Glutamate receptor 2" sp... 152 7.7e-26 3
UNIPROTKB|P42262 - symbol:GRIA2 "Glutamate receptor 2" sp... 152 9.7e-26 3
UNIPROTKB|E1C2Q1 - symbol:GRIK4 "Uncharacterized protein"... 182 1.3e-25 3
UNIPROTKB|Q5R4M0 - symbol:GRIA2 "Glutamate receptor 2" sp... 144 2.8e-25 3
UNIPROTKB|Q5R1P0 - symbol:GRIN1 "Glutamate receptor ionot... 191 3.6e-25 5
UNIPROTKB|Q5VSF9 - symbol:GRIN1 "Glutamate receptor ionot... 191 3.9e-25 5
UNIPROTKB|F1NKF1 - symbol:GRIA2 "Uncharacterized protein"... 145 4.4e-25 3
UNIPROTKB|F1PHA8 - symbol:GRIK4 "Uncharacterized protein"... 183 6.2e-25 3
UNIPROTKB|Q16099 - symbol:GRIK4 "Glutamate receptor ionot... 183 6.2e-25 3
UNIPROTKB|F1S9S0 - symbol:GRIK4 "Uncharacterized protein"... 182 7.6e-25 4
FB|FBgn0010399 - symbol:Nmdar1 "NMDA receptor 1" species:... 178 1.2e-24 3
UNIPROTKB|G3N3K3 - symbol:GRIN1 "Uncharacterized protein"... 183 1.9e-24 5
UNIPROTKB|B3P2E5 - symbol:Nmdar1 "Glutamate [NMDA] recept... 178 2.5e-24 3
UNIPROTKB|B4I414 - symbol:Nmdar1 "Glutamate [NMDA] recept... 178 2.5e-24 3
UNIPROTKB|B4PVB0 - symbol:Nmdar1 "Glutamate [NMDA] recept... 178 2.5e-24 3
UNIPROTKB|B4QWW7 - symbol:Nmdar1 "Glutamate [NMDA] recept... 178 2.5e-24 3
MGI|MGI:95817 - symbol:Grik4 "glutamate receptor, ionotro... 182 2.6e-24 3
UNIPROTKB|F1NY64 - symbol:GRIA2 "Uncharacterized protein"... 145 3.7e-24 3
ZFIN|ZDB-GENE-051202-1 - symbol:grin1a "glutamate recepto... 191 4.3e-24 5
UNIPROTKB|E7EMV5 - symbol:GRIA1 "Glutamate receptor 1" sp... 165 8.0e-24 3
RGD|2734 - symbol:Grik4 "glutamate receptor, ionotropic, ... 174 9.5e-24 3
UNIPROTKB|Q01812 - symbol:Grik4 "Glutamate receptor ionot... 174 9.5e-24 3
UNIPROTKB|E2RFB5 - symbol:GRIK5 "Uncharacterized protein"... 151 2.1e-23 3
UNIPROTKB|B4GF83 - symbol:Nmdar1 "Glutamate [NMDA] recept... 179 2.2e-23 3
UNIPROTKB|Q296F7 - symbol:Nmdar1 "Glutamate [NMDA] recept... 179 2.2e-23 3
UNIPROTKB|B3LZ39 - symbol:Nmdar1 "Glutamate [NMDA] recept... 178 2.7e-23 3
UNIPROTKB|B4KD90 - symbol:Nmdar1 "Glutamate [NMDA] recept... 177 1.1e-22 3
ZFIN|ZDB-GENE-051202-2 - symbol:grin1b "glutamate recepto... 192 1.5e-22 4
FB|FBgn0039927 - symbol:CG11155 species:7227 "Drosophila ... 149 3.9e-22 4
RGD|68366 - symbol:Grid1 "glutamate receptor, ionotropic,... 143 4.5e-22 3
ZFIN|ZDB-GENE-030616-53 - symbol:gria3b "glutamate recept... 146 5.4e-22 3
UNIPROTKB|B4JHV0 - symbol:Nmdar1 "Glutamate [NMDA] recept... 176 5.8e-22 3
UNIPROTKB|B4LZB5 - symbol:Nmdar1 "Glutamate [NMDA] recept... 171 6.2e-22 3
UNIPROTKB|Q9ULK0 - symbol:GRID1 "Glutamate receptor ionot... 143 1.2e-21 3
UNIPROTKB|Q16478 - symbol:GRIK5 "Glutamate receptor ionot... 147 1.6e-21 3
UNIPROTKB|F1PY46 - symbol:GRIN1 "Glutamate receptor ionot... 191 1.8e-21 4
UNIPROTKB|J9NUD0 - symbol:GRIK3 "Uncharacterized protein"... 204 2.1e-21 2
UNIPROTKB|E2R3A6 - symbol:E2R3A6 "Uncharacterized protein... 191 2.3e-21 3
UNIPROTKB|F1P2J9 - symbol:GRIN1 "Uncharacterized protein"... 194 2.5e-21 2
UNIPROTKB|J9P242 - symbol:GRIK5 "Uncharacterized protein"... 147 3.2e-21 3
UNIPROTKB|Q38PU0 - symbol:GRIK5 "KA2" species:9541 "Macac... 147 3.7e-21 3
ZFIN|ZDB-GENE-030131-8013 - symbol:gria4b "glutamate rece... 138 4.3e-21 3
MGI|MGI:95812 - symbol:Grid1 "glutamate receptor, ionotro... 141 7.8e-21 3
MGI|MGI:95818 - symbol:Grik5 "glutamate receptor, ionotro... 147 8.3e-21 3
RGD|2735 - symbol:Grik5 "glutamate receptor, ionotropic, ... 147 8.3e-21 3
UNIPROTKB|F1N246 - symbol:GRIK1 "Uncharacterized protein"... 210 1.1e-20 2
ZFIN|ZDB-GENE-020125-5 - symbol:gria3a "glutamate recepto... 148 1.5e-20 3
UNIPROTKB|L7MTP7 - symbol:GRIN1 "Glutamate receptor ionot... 191 1.9e-20 5
UNIPROTKB|F6Y5R7 - symbol:GRIN1 "Glutamate receptor ionot... 191 2.0e-20 5
MGI|MGI:95814 - symbol:Grik1 "glutamate receptor, ionotro... 183 2.5e-20 3
UNIPROTKB|F1RU73 - symbol:LOC100519996 "Uncharacterized p... 149 2.6e-20 3
UNIPROTKB|F1P0S5 - symbol:GRIA3 "Uncharacterized protein"... 149 2.6e-20 3
UNIPROTKB|E2RHU1 - symbol:GRIA3 "Uncharacterized protein"... 149 3.1e-20 3
UNIPROTKB|E7EPZ0 - symbol:GRIK1 "Glutamate receptor ionot... 183 4.3e-20 3
WARNING: Descriptions of 421 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2081805 [details] [associations]
symbol:GLR3.6 "glutamate receptor 3.6" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230
EMBL:AL133452 GO:GO:0004965 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:BT004264 IPI:IPI00517161
PIR:T45779 RefSeq:NP_190716.3 UniGene:At.35384
ProteinModelPortal:Q84W41 EnsemblPlants:AT3G51480.1 GeneID:824311
KEGG:ath:AT3G51480 TAIR:At3g51480 InParanoid:Q84W41 OMA:FTKNGWG
PhylomeDB:Q84W41 ProtClustDB:CLSN2918557 Genevestigator:Q84W41
GermOnline:AT3G51480 Uniprot:Q84W41
Length = 903
Score = 2820 (997.7 bits), Expect = 1.1e-293, P = 1.1e-293
Identities = 546/913 (59%), Positives = 693/913 (75%)
Query: 8 LLMIFYCELFVYR-ITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTL 66
LLM+ C + +T S RP VVNIG++ +F++ +GKV K+A+ AAV+DVN+ P+ L
Sbjct: 5 LLMLIICNAVPLQGLTKIVSARPQVVNIGSVFTFNSLIGKVIKVAMDAAVEDVNASPSIL 64
Query: 67 GGTKLKLQMQDCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSF 126
T L++ M D ++GF+++ E L ME +TVAIIGPQ + T+ VV+HVA EL++P+LSF
Sbjct: 65 NTTTLRIIMHDTKYNGFMSIMEPLQFMESETVAIIGPQRSTTARVVAHVATELKIPILSF 124
Query: 127 SATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGD 186
SATDPT+S LQFP+F+RT+Q+D +QMAAIA+IV YGWREV+AIY DDD+GRNG+AALGD
Sbjct: 125 SATDPTMSPLQFPFFIRTSQNDLFQMAAIADIVQFYGWREVVAIYGDDDYGRNGVAALGD 184
Query: 187 TLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
L+ KRCRIS+KA L T + ITDLL+KVAL+ESRIIVVH + G +F+VA+ LGM
Sbjct: 185 RLSEKRCRISYKAALPPAPTRENITDLLIKVALSESRIIVVHASFIWGLELFNVARNLGM 244
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDA 306
+ TGYVWIAT+WLST +DT+SP P D +++IQGV+TLR +TP+S++K+ F+ RW NLT
Sbjct: 245 MSTGYVWIATNWLSTIIDTDSPLPLDTINNIQGVITLRLHTPNSIMKQNFVQRWHNLT-- 302
Query: 307 KTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQG-HLRLDSLRI 365
++GL+ Y YAYDTVWLLA+AI+ FFK+GGN+SFSK+ +S++ G +L LD+L++
Sbjct: 303 -----HVGLSTYALYAYDTVWLLAQAIDDFFKKGGNVSFSKNPIISELGGGNLHLDALKV 357
Query: 366 FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
F+GG + +SILQ + G G +F S +L+NPA++++NVIGTGY IGYW N+SGLSV
Sbjct: 358 FDGGKIFLESILQVDRIGLTGRMKFTSDRNLVNPAFDVLNVIGTGYTTIGYWFNHSGLSV 417
Query: 426 VRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVS 485
+ + + N S S Q+L+SV+WPG + + PRGWVF NNGRHLRIGVPNR F E VS
Sbjct: 418 MPADEM----ENTSFSGQKLHSVVWPGHSIKIPRGWVFSNNGRHLRIGVPNRYRFEEVVS 473
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVYDAAVGD 545
VK + M +GFC+DVF AAINLLPYAVP++L+ FG+GH+NPS +ELVRLIT GVYDA VGD
Sbjct: 474 VKSNGMITGFCVDVFIAAINLLPYAVPFELVAFGNGHDNPSNSELVRLITTGVYDAGVGD 533
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
I IIT RTKMADFTQPY+ESGLVVVAPVRKL S+A AFL PFTP MW + A FL VGAV
Sbjct: 534 ITIITERTKMADFTQPYVESGLVVVAPVRKLGSSAMAFLRPFTPQMWLIAAASFLIVGAV 593
Query: 606 VWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXXXXXXNS 665
+W LEH+ NDEFRGPP+RQV+T FWFSFST+FF+H+E T S LGR NS
Sbjct: 594 IWCLEHKHNDEFRGPPRRQVITTFWFSFSTLFFSHRETTTSNLGRIVLIIWLFVVLIINS 653
Query: 666 SYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLVPLNS 725
SYTASLTSILTV +LSSPIKGI++L++++ PIGY SF R+YL+ ELNI SRLVPL S
Sbjct: 654 SYTASLTSILTVHQLSSPIKGIETLQTNHDPIGYPQGSFVRDYLIHELNIHVSRLVPLRS 713
Query: 726 PEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLA 785
PEEY KAL+DGP KGGVAAVVD+RAY ELFLS RCEF IVGQ FTKNGWGFAFPR+SPLA
Sbjct: 714 PEEYDKALRDGPGKGGVAAVVDERAYIELFLSNRCEFGIVGQEFTKNGWGFAFPRNSPLA 773
Query: 786 VDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLDVDRLQLKSFSXXXXXXXXXXXXX 845
VD+S AIL+LSENGD+QRI DKWLLR ACS QGA+++VDRL+LKSF
Sbjct: 774 VDVSAAILQLSENGDMQRIRDKWLLRKACSLQGAEIEVDRLELKSFWGLFVVCGVACVLA 833
Query: 846 XFIYLMQIVHQFSRHYPGDTESN--GGSSRSARLQTFLSFVNEKEDEVKSRSKR-RHVER 902
+Y + ++ QF + P + E + SS SAR+ +FLSFV EKE++ K+RS R R +E
Sbjct: 834 LAVYTVLMIRQFGQQCPEEAEGSIRRRSSPSARIHSFLSFVKEKEEDAKARSSRERQLED 893
Query: 903 TSYRSEDEMSSCN 915
S S CN
Sbjct: 894 ISANGS---SRCN 903
>TAIR|locus:2206095 [details] [associations]
symbol:GLR3.3 "glutamate receptor 3.3" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005262 "calcium channel activity"
evidence=IMP] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0008066 "glutamate receptor activity" evidence=IMP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IMP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 GO:GO:0009630
InterPro:IPR001828 GO:GO:0071230 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AC025815
IPI:IPI00548873 PIR:C96495 RefSeq:NP_174978.1 UniGene:At.39090
ProteinModelPortal:Q9C8E7 TCDB:1.A.10.1.10 PaxDb:Q9C8E7
PRIDE:Q9C8E7 EnsemblPlants:AT1G42540.1 GeneID:840859
KEGG:ath:AT1G42540 TAIR:At1g42540 InParanoid:Q9C8E7 OMA:FTCERRV
PhylomeDB:Q9C8E7 ProtClustDB:CLSN2914596 ArrayExpress:Q9C8E7
Genevestigator:Q9C8E7 Uniprot:Q9C8E7
Length = 933
Score = 2674 (946.4 bits), Expect = 3.2e-278, P = 3.2e-278
Identities = 532/915 (58%), Positives = 659/915 (72%)
Query: 1 MKLSGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVN 60
MK + F C ++R T S +P VV IG++ SF + +GKVAK+AI AV DVN
Sbjct: 1 MKQLWTFFFLSFLCS-GLFRRTH--SEKPKVVKIGSIFSFDSVIGKVAKIAIDEAVKDVN 57
Query: 61 SDPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQ 120
S+P L GTK + MQ+ N SGF+ + EAL ME V IIGPQ +V +H++SH+ANEL+
Sbjct: 58 SNPDILSGTKFSVSMQNSNCSGFMGMVEALRFMEKDIVGIIGPQCSVVAHMISHMANELR 117
Query: 121 VPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNG 180
VPLLSF+ TDP +S LQFPYF+RTTQSD YQM AIA IVD YGW+EVIA++VDDD GRNG
Sbjct: 118 VPLLSFAVTDPVMSPLQFPYFIRTTQSDLYQMDAIASIVDFYGWKEVIAVFVDDDFGRNG 177
Query: 181 IAALGDTLAAKRCRISFKAPLSVEAT--EDEITDLLVKVALTESRIIVVHTHYNRGPVVF 238
+AAL D LA++R RI++KA L + ++EI ++L+K+ L + RI+V+H + G VF
Sbjct: 178 VAALNDKLASRRLRITYKAGLHPDTAVNKNEIMNMLIKIMLLQPRIVVIHVYSELGFAVF 237
Query: 239 HVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFIS 298
A+YLGM+G GYVWIAT WLST LD++SP P++ ++ IQGVL LR +TPDS KR+F
Sbjct: 238 KEAKYLGMMGNGYVWIATDWLSTNLDSSSPLPAERLETIQGVLVLRPHTPDSDFKREFFK 297
Query: 299 RWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDI--QG 356
RWR ++ A + LN YG YAYD+V LLAR ++ FFK GGN+SFS S L+ + G
Sbjct: 298 RWRKMSGAS-----LALNTYGLYAYDSVMLLARGLDKFFKDGGNISFSNHSMLNTLGKSG 352
Query: 357 HLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGY 416
+L L+++ +F+GG L IL M G G +F PAY+IINV GTG R+IGY
Sbjct: 353 NLNLEAMTVFDGGEALLKDILGTRMVGLTGQLQFTPDRSRTRPAYDIINVAGTGVRQIGY 412
Query: 417 WSNYSGLSVVRPETLYSKP-PNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVP 475
WSN+SGLS V PE LY+K PN S+S +L VIWPG+T KPRGWVF NNG+ L+IGVP
Sbjct: 413 WSNHSGLSTVLPELLYTKEKPNMSTS-PKLKHVIWPGETFTKPRGWVFSNNGKELKIGVP 471
Query: 476 NRVSFREFVS-VKGSE-MTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRL 533
RVS++EFVS ++G+E M GFCIDVFTAA+NLLPYAVP K IP+G+G NPS T +V +
Sbjct: 472 LRVSYKEFVSQIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKENPSYTHMVEM 531
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
IT G +D VGD+AI+TNRTK+ DFTQPY SGLVVVAP +KL+S AWAFL PF +MW
Sbjct: 532 ITTGNFDGVVGDVAIVTNRTKIVDFTQPYAASGLVVVAPFKKLNSGAWAFLRPFNRLMWA 591
Query: 594 VTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXX 653
VT FL VG VVWILEHR NDEFRGPPKRQ VTI WFSFSTMFFAH+E TVS LGR
Sbjct: 592 VTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVTILWFSFSTMFFAHRENTVSTLGRLVL 651
Query: 654 XXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL 713
NSSYTASLTSILTVQ+LSSPIKGI+SLR + PIGYQV SFA +YL +EL
Sbjct: 652 IIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLRERDDPIGYQVGSFAESYLRNEL 711
Query: 714 NIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNG 773
NI ESRLVPL +PE YAKALKDGP KGGVAA+VD+R Y ELFLS+ C + IVGQ FTK+G
Sbjct: 712 NISESRLVPLGTPEAYAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIVGQEFTKSG 771
Query: 774 WGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLDVDRLQLKSFSX 833
WGFAFPRDSPLA+D+STAIL+L+ENGDLQRIHDKWL+++AC+ + A+L+ DRL LKSF
Sbjct: 772 WGFAFPRDSPLAIDLSTAILELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWG 831
Query: 834 XXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDT-----ESNGGSS--RSARLQTFLSFVNE 886
F+Y +QI+ Q + D + N SS RS RLQ FLS ++E
Sbjct: 832 LFLICGVACLLALFLYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDE 891
Query: 887 KEDEVKSRSKRRHVE 901
KE E K SK+R ++
Sbjct: 892 KE-ESKHESKKRKID 905
>TAIR|locus:2122128 [details] [associations]
symbol:GLUR2 "glutamate receptor 2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=IMP] [GO:0006883 "cellular sodium ion
homeostasis" evidence=IMP] [GO:0030007 "cellular potassium ion
homeostasis" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:AL022604
EMBL:AL161587 GO:GO:0071230 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 EMBL:AF159498 EMBL:AF159499 EMBL:AY059778
IPI:IPI00535851 PIR:T06128 RefSeq:NP_567981.1 RefSeq:NP_974686.1
UniGene:At.2283 ProteinModelPortal:Q93YT1 PRIDE:Q93YT1
EnsemblPlants:AT4G35290.1 EnsemblPlants:AT4G35290.2 GeneID:829682
KEGG:ath:AT4G35290 TAIR:At4g35290 InParanoid:Q93YT1 OMA:MIDELNI
PhylomeDB:Q93YT1 ProtClustDB:CLSN2689771 Genevestigator:Q93YT1
GermOnline:AT4G35290 Uniprot:Q93YT1
Length = 912
Score = 2500 (885.1 bits), Expect = 8.9e-260, P = 8.9e-260
Identities = 496/913 (54%), Positives = 644/913 (70%)
Query: 6 VMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTT 65
V++L+ F + I+ A RP V++GA+ S T G+V +A+KAA +DVNSDP+
Sbjct: 4 VLVLLSFIVLIGDGMISEGAGLRPRYVDVGAIFSLGTLQGEVTNIAMKAAEEDVNSDPSF 63
Query: 66 LGGTKLKLQMQDCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLS 125
LGG+KL++ D +GFL + AL ME VAIIGPQ ++ +HV+SH+ANEL VP+LS
Sbjct: 64 LGGSKLRITTYDAKRNGFLTIMGALQFMETDAVAIIGPQTSIMAHVLSHLANELSVPMLS 123
Query: 126 FSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALG 185
F+A DP+LS+LQFP+FV+T SD + M AIAE++ +YGW EVIA+Y DDD+ RNGI ALG
Sbjct: 124 FTALDPSLSALQFPFFVQTAPSDLFLMRAIAEMISYYGWSEVIALYNDDDNSRNGITALG 183
Query: 186 DTLAAKRCRISFKA--PLSVEATED-EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQ 242
D L +RC+IS+KA PL V T EI + LVK+ ESR+I+V+T G +F AQ
Sbjct: 184 DELEGRRCKISYKAVLPLDVVITSPREIINELVKIQGMESRVIIVNTFPKTGKKIFEEAQ 243
Query: 243 YLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRN 302
LGM+ GYVWIAT+WL++ LD+ +P P+ + ++GVLTLR +TP+S K+ F++RW
Sbjct: 244 KLGMMEKGYVWIATTWLTSLLDSVNPLPAKTAESLRGVLTLRIHTPNSKKKKDFVARWNK 303
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQG--HLRL 360
L+ NG +GLN YG YAYDTVW++ARA+ N+SFS D +L+ ++G L L
Sbjct: 304 LS-----NGTVGLNVYGLYAYDTVWIIARAVKRLLDSRANISFSSDPKLTSMKGGGSLNL 358
Query: 361 DSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNY 420
+L IF+ G+ D I+ NMTG G +F +I P+Y+IINV+ G+R+IGYWSN+
Sbjct: 359 GALSIFDQGSQFLDYIVNTNMTGVTGQIQFLPDRSMIQPSYDIINVVDDGFRQIGYWSNH 418
Query: 421 SGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSF 480
SGLS++ PE+LY K NRSSSNQ L +V WPG T++ PRGWVFPNNGR LRIGVP+R SF
Sbjct: 419 SGLSIIPPESLYKKLSNRSSSNQHLNNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASF 478
Query: 481 REFVS-VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVY 539
+EFVS + GS G+ IDVF AA+ L+ Y VP++ + FGDG NP+ E V +T GV+
Sbjct: 479 KEFVSRLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPNFNEFVNNVTIGVF 538
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
DA VGDIAI+T RT++ DFTQPYIESGLVVVAPV KL+ WAFL PFTP MW VTA FF
Sbjct: 539 DAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAPVTKLNDTPWAFLRPFTPPMWAVTAAFF 598
Query: 600 LAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXX 659
L VG+V+WILEHR+NDEFRGPP++Q+VTI WFSFSTMFF+H+E TVS LGR
Sbjct: 599 LIVGSVIWILEHRINDEFRGPPRKQIVTILWFSFSTMFFSHRENTVSTLGRAVLLIWLFV 658
Query: 660 XXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDESR 719
SSYTASLTSILTVQ+L+SPI+G+D+L SS+ +G+QV S+A NY++DELNI SR
Sbjct: 659 VLIITSSYTASLTSILTVQQLNSPIRGVDTLISSSGRVGFQVGSYAENYMIDELNIARSR 718
Query: 720 LVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFP 779
LVPL SP+EYA AL++G VAA+VD+R Y +LFLS C F+I GQ FT++GWGFAFP
Sbjct: 719 LVPLGSPKEYAAALQNGT----VAAIVDERPYVDLFLSEFCGFAIRGQEFTRSGWGFAFP 774
Query: 780 RDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSS-QGAKLDVD--RLQLKSFSXXXX 836
RDSPLA+D+STAIL LSE G LQ+IHDKWL RS CS+ G+ D D +L+L+SF
Sbjct: 775 RDSPLAIDMSTAILGLSETGQLQKIHDKWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFL 834
Query: 837 XXXXXXXXXXFIYLMQIVHQFSRHYPGDTES---NGGSSRSARLQTFLSFVNEKEDEVKS 893
FIY +IV F RH D E+ + SSRS LQTFL++ +EKEDE K
Sbjct: 835 VCGISCFIALFIYFFKIVRDFFRHGKYDEEATVPSPESSRSKSLQTFLAYFDEKEDESKR 894
Query: 894 RSKRRHVERTSYR 906
R KR+ + S +
Sbjct: 895 RMKRKRNDDLSLK 907
>TAIR|locus:2207165 [details] [associations]
symbol:GLR3.4 "AT1G05200" species:3702 "Arabidopsis
thaliana" [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0019722
"calcium-mediated signaling" evidence=IDA] [GO:0070417 "cellular
response to cold" evidence=IEP] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEP] [GO:0071311
"cellular response to acetate" evidence=IEP] [GO:0005262 "calcium
channel activity" evidence=IMP] [GO:0006816 "calcium ion transport"
evidence=IDA;IMP] [GO:0008066 "glutamate receptor activity"
evidence=IMP] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IDA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009507 GO:GO:0009611
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0015276 GO:GO:0071260 GO:GO:0070417 InterPro:IPR001828
GO:GO:0071230 EMBL:AC000098 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 TCDB:1.A.10.1.10
EMBL:AY072070 EMBL:AK118206 EMBL:AF167355 IPI:IPI00517695
IPI:IPI00538965 PIR:D86186 PIR:T51135 RefSeq:NP_001030971.1
RefSeq:NP_172012.2 UniGene:At.10412 UniGene:At.66937
ProteinModelPortal:Q8GXJ4 PRIDE:Q8GXJ4 EnsemblPlants:AT1G05200.1
EnsemblPlants:AT1G05200.2 GeneID:839268 KEGG:ath:AT1G05200
GeneFarm:2532 TAIR:At1g05200 InParanoid:Q8GXJ4 OMA:WHLDEND
PhylomeDB:Q8GXJ4 ProtClustDB:CLSN2690705 Genevestigator:Q8GXJ4
GermOnline:AT1G05200 GO:GO:0071311 Uniprot:Q8GXJ4
Length = 959
Score = 2381 (843.2 bits), Expect = 3.6e-247, P = 3.6e-247
Identities = 480/912 (52%), Positives = 629/912 (68%)
Query: 28 RPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALA 87
RPS VN+GAL ++ + +G+ AK A+KAA+DDVN+D + L G KL + QD N SGF+
Sbjct: 57 RPSSVNVGALFTYDSFIGRAAKPAVKAAMDDVNADQSVLKGIKLNIIFQDSNCSGFIGTM 116
Query: 88 EALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQS 147
AL LME + VA IGPQ + +H++S+VANEL VPLLSF ATDPTLSSLQFPYF+RTTQ+
Sbjct: 117 GALQLMENKVVAAIGPQSSGIAHMISYVANELHVPLLSFGATDPTLSSLQFPYFLRTTQN 176
Query: 148 DQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATE 207
D +QM AIA+ + + GWR+VIAI+VDD+ GRNGI+ LGD LA KR RIS+KA ++ A
Sbjct: 177 DYFQMHAIADFLSYSGWRQVIAIFVDDECGRNGISVLGDVLAKKRSRISYKAAITPGADS 236
Query: 208 DEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNS 267
I DLLV V L ESR+ VVH + + G VF VA+ LGM+ +GYVWIAT WL TA+D+
Sbjct: 237 SSIRDLLVSVNLMESRVFVVHVNPDSGLNVFSVAKSLGMMASGYVWIATDWLPTAMDSME 296
Query: 268 PFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVW 327
SD MD +QGV+ R YT +S +KR+F++RW+NL PN G N+Y YAYD+VW
Sbjct: 297 HVDSDTMDLLQGVVAFRHYTIESSVKRQFMARWKNLR----PND--GFNSYAMYAYDSVW 350
Query: 328 LLARAINSFFKQGGNLSFSKDSRLSDIQGH-LRLDSLRIFNGGNLLRDSILQANMTGTAG 386
L+ARA++ FF++ N++FS D L G ++L +L +FN G IL N TG G
Sbjct: 351 LVARALDVFFRENNNITFSNDPNLHKTNGSTIQLSALSVFNEGEKFMKIILGMNHTGVTG 410
Query: 387 PARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQRLY 446
P +F+S + +NPAYE++N+ GT R +GYWSN+SGLSVV PETLYS+PPN S++NQRL
Sbjct: 411 PIQFDSDRNRVNPAYEVLNLEGTAPRTVGYWSNHSGLSVVHPETLYSRPPNTSTANQRLK 470
Query: 447 SVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSV-KGSEMTSGFCIDVFTAAIN 505
+I+PG+ T+ PRGWVFPNNG+ LRIGVPNRVS+ ++VS K G+CIDVF AAI
Sbjct: 471 GIIYPGEVTKPPRGWVFPNNGKPLRIGVPNRVSYTDYVSKDKNPPGVRGYCIDVFEAAIE 530
Query: 506 LLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIES 565
LLPY VP I +GDG NPS LV + A +D AVGDI I+TNRT+ DFTQP+IES
Sbjct: 531 LLPYPVPRTYILYGDGKRNPSYDNLVNEVVADNFDVAVGDITIVTNRTRYVDFTQPFIES 590
Query: 566 GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQV 625
GLVVVAPV++ S+ W+FL PFT MW VT FFL VGA+VWILEHR N EFRGPP+RQ+
Sbjct: 591 GLVVVAPVKEAKSSPWSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRFNQEFRGPPRRQL 650
Query: 626 VTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIK 685
+TIFWFSFSTMFF+H+E TVS+LGR NSSYTASLTSILT+++L+S I+
Sbjct: 651 ITIFWFSFSTMFFSHRENTVSSLGRFVLIIWLFVVLIINSSYTASLTSILTIRQLTSRIE 710
Query: 686 GIDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAV 745
GIDSL +SN PIG Q +FARNYL++ELNI SR+VPL E+Y AL+ GP+ GGVAA+
Sbjct: 711 GIDSLVTSNEPIGVQDGTFARNYLINELNILPSRIVPLKDEEQYLSALQRGPNAGGVAAI 770
Query: 746 VDDRAYAELFLS-TRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRI 804
VD+ Y E+ L+ + C+F VGQ FT+ GWGFAF RDSPLAVD+STAIL+LSE G+L++I
Sbjct: 771 VDELPYIEVLLTNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLSEEGELEKI 830
Query: 805 HDKWL-LRSACSSQGAKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYP- 862
H KWL + CS Q + + +L LKSF ++ ++ Q+ R P
Sbjct: 831 HRKWLNYKHECSMQISNSEDSQLSLKSFWGLFLICGITCFMALTVFFWRVFWQYQRLLPE 890
Query: 863 -GDTESNGG------SSRSARLQTF---LSFVNEKEDEVKSRSKRRHVERTSYRSEDEMS 912
D E G S R +R +F + V+++E E+K K++ ++ + +
Sbjct: 891 SADEERAGEVSEPSRSGRGSRAPSFKELIKVVDKREAEIKEILKQKSSKKLK---STQSA 947
Query: 913 SCNSNRKHIELS 924
+ S +H E++
Sbjct: 948 AGTSQSQHGEIT 959
>TAIR|locus:2062586 [details] [associations]
symbol:GLR5 "glutamate receptor 5" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC005700 GO:GO:0004965
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AF210701
IPI:IPI00548986 PIR:F84732 PIR:T51136 RefSeq:NP_565744.1
UniGene:At.13201 ProteinModelPortal:Q9SDQ4 SMR:Q9SDQ4 IntAct:Q9SDQ4
PaxDb:Q9SDQ4 PRIDE:Q9SDQ4 EnsemblPlants:AT2G32400.1 GeneID:817801
KEGG:ath:AT2G32400 GeneFarm:2534 TAIR:At2g32400 eggNOG:NOG282132
InParanoid:Q9SDQ4 OMA:NSSHRIQ PhylomeDB:Q9SDQ4
ProtClustDB:CLSN2688630 Genevestigator:Q9SDQ4 GermOnline:AT2G32400
Uniprot:Q9SDQ4
Length = 921
Score = 1890 (670.4 bits), Expect = 3.9e-195, P = 3.9e-195
Identities = 396/887 (44%), Positives = 560/887 (63%)
Query: 28 RPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALA 87
RP +VNIGA+ +F + +G+ AK+A++AAV DVN+D + L T+L+L M+D + F
Sbjct: 27 RPQLVNIGAVFAFDSVIGRAAKVALEAAVSDVNNDKSFLKETELRLLMEDSACNVFRGSF 86
Query: 88 EALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQS 147
A L+E + VA+IGP + +H +S +A L PL+SF+ATDPTLS+LQFP+F+RTT +
Sbjct: 87 GAFELLEKEVVAMIGPISSSVAHTISDIAKGLHFPLVSFAATDPTLSALQFPFFLRTTPN 146
Query: 148 DQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATE 207
D +QM+A+ ++++ YGW+EVI++Y DD+ GRNG++AL D L KR RIS+K PLSV + E
Sbjct: 147 DAHQMSALVDLINFYGWKEVISVYSDDELGRNGVSALDDELYKKRSRISYKVPLSVHSDE 206
Query: 208 DEITDLLVKVALTESRIIVVHTHYNRGPV--VFHVAQYLGMLGTGYVWIATSWLSTALDT 265
+T+ L K R+ ++H + P+ +F +AQ L M+ YVW+AT WLS LD+
Sbjct: 207 KFLTNALNKSKSIGPRVYILH--FGPDPLLRIFDIAQKLQMMTHEYVWLATDWLSVTLDS 264
Query: 266 NSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDT 325
S + ++GV+ LR + P+SV F + ++ N +NAY +AYDT
Sbjct: 265 LSD--KGTLKRLEGVVGLRQHIPESVKMEHFTHKLQS-------NR--SMNAYALHAYDT 313
Query: 326 VWLLARAINSFFKQGGNLSFSKDSRLSDIQG-HLRLDSLRIFNGGNLLRDSILQANMTGT 384
VW++A I +G N++FS +L +G L L+ ++ FN G LL + +L+ N TG
Sbjct: 314 VWMIAHGIEELLNEGINITFSYSEKLLHARGTKLHLEKIKFFNSGELLLEKLLKVNFTGI 373
Query: 385 AGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQR 444
AG +F S ++I YEIINV T +G+WS G SVV P+T +S+ S+++
Sbjct: 374 AGQVQFGSGRNVIGCDYEIINVNKTDVHTVGFWSKNGGFSVVAPKTRHSQKKTSFVSDEK 433
Query: 445 LYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVK--GSEMTSGFCIDVFTA 502
L + WPG +KPRGWV ++ L+I VP RVSF EFV+ + S GFCIDVF
Sbjct: 434 LGDITWPGGGREKPRGWVIADSADPLKIVVPRRVSFVEFVTEEKNSSHRIQGFCIDVFIE 493
Query: 503 AINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPY 562
A+ +PY+VPY PFG+GH++P+ L++++T GVYDAAVGDIAI+ +R+K+ DF+QPY
Sbjct: 494 ALKFVPYSVPYIFEPFGNGHSSPNYNHLIQMVTDGVYDAAVGDIAIVPSRSKLVDFSQPY 553
Query: 563 IESGLVVVAPVRKLDSNA-WAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPP 621
+GLVVV P D NA W FL PFT +W V + FL + V+WILEHR+N++FRGPP
Sbjct: 554 ASTGLVVVIPAN--DDNATWIFLRPFTSRLWCVVLVSFLVIAVVIWILEHRINEDFRGPP 611
Query: 622 KRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLS 681
+RQ+ T+ FSFST+F ++E T+S L R +SYTA+LTSILTVQ+L
Sbjct: 612 RRQLSTMLLFSFSTLFKRNQEDTISNLARLVMIVWLFLLMVLTASYTANLTSILTVQQLP 671
Query: 682 SPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLVPLNSPEEYAKALKDGPHK-G 740
S I GIDSLR+S PIGYQ +F YL L + SRLVPL+S EEY KALK GP G
Sbjct: 672 SAITGIDSLRASEVPIGYQAGTFTLEYLTYSLGMARSRLVPLDSTEEYEKALKLGPTNWG 731
Query: 741 GVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGD 800
GVAA+VD+ Y ELFL+ R F IVG+ F GWGFAF RDSPLA+D+STAILKLSE
Sbjct: 732 GVAAIVDELPYIELFLAERTGFKIVGEPFMHRGWGFAFKRDSPLAIDMSTAILKLSETRK 791
Query: 801 LQRIHDKWLLRSACSSQGA-KLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSR 859
LQ I KWL ++ C+ + + ++L LKSF +++++++ QF R
Sbjct: 792 LQEIRKKWLCKTNCAGKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVR 851
Query: 860 HYPGD-TESNGGSSRSA----RLQT----FLSFVNEKEDEVKSRSKR 897
+ + T S +S SA RL+ F+ FV+EKE+ +K +R
Sbjct: 852 YRRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRR 898
>TAIR|locus:2047251 [details] [associations]
symbol:GLR2.3 "glutamate receptor 2.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 EMBL:AC007266 GO:GO:0071230
eggNOG:COG0683 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
ProtClustDB:CLSN2683132 IPI:IPI00526740 PIR:A84640
RefSeq:NP_180047.1 UniGene:At.52897 ProteinModelPortal:Q9SHV2
PaxDb:Q9SHV2 PRIDE:Q9SHV2 EnsemblPlants:AT2G24710.1 GeneID:817007
KEGG:ath:AT2G24710 TAIR:At2g24710 InParanoid:Q9SHV2 OMA:QASTICW
PhylomeDB:Q9SHV2 Genevestigator:Q9SHV2 GermOnline:AT2G24710
Uniprot:Q9SHV2
Length = 895
Score = 1193 (425.0 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 287/819 (35%), Positives = 435/819 (53%)
Query: 2 KLSGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDV-N 60
KL +LL+ F+C F Q +G+ ++V++G + T+ KV L I ++ D +
Sbjct: 5 KLFFCILLVFFFCLEFN---RGQNNGK-TLVDVGVVTDVDTSHSKVVMLCINMSISDFYS 60
Query: 61 SDPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANEL 119
S+P T+L + + D A AL L++ + V AI+GP ++ +H + + +
Sbjct: 61 SNPQF--ETRLVVNVGDSKSDVVGAAIAALDLIKNKQVKAILGPWTSMQAHFLIEIGQKS 118
Query: 120 QVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRN 179
+VP++S+SAT P L+SL+ PYF+R T D +Q+ I I+ +GWREV+ +Y+D+ G
Sbjct: 119 RVPIVSYSATSPILTSLRSPYFLRATYEDSFQVQPIKAIIKLFGWREVVPVYIDNTFGEG 178
Query: 180 GIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFH 239
+ L D L RI +++ +++ AT+ EI+ L+K+ +R+ +VH +Y+ F
Sbjct: 179 IMPRLTDALQDINVRIPYRSVIAINATDHEISVELLKMMNMPTRVFLVHMYYDLASRFFI 238
Query: 240 VAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR 299
A+ LG++ GYVWI T+ + +D S ++ ++GVL ++TY P S KF SR
Sbjct: 239 KAKELGLMEPGYVWILTNGV---IDDLSLINETAVEAMEGVLGIKTYIPKSPDLEKFRSR 295
Query: 300 WRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHL- 358
WR+L P + L+ YG +AYD LA AI N++FSK + D ++
Sbjct: 296 WRSLF----PR--VELSVYGLWAYDATTALAVAIEE--AGTNNMTFSK---VVDTGRNVS 344
Query: 359 RLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWS 418
L++L + G L ++L G AG RF G L +EI+N+I TG + IG+W
Sbjct: 345 ELEALGLSQFGPKLLQTLLTVQFRGLAGEFRF-FRGQLQPSVFEIVNIINTGEKSIGFWK 403
Query: 419 NYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRV 478
+GL V + + S S+ L ++WPG+ P+GW P G+ LRIGVP R
Sbjct: 404 EGNGL-VKKLDQQASSISALSTWKDHLKHIVWPGEADSVPKGWQIPTKGKKLRIGVPKRT 462
Query: 479 SFREFVSVK-----GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFG--DGHNNPSCTELV 531
+ + V V S + +GFCID F A I LPY V Y+ IPF DG + +LV
Sbjct: 463 GYTDLVKVTRDPITNSTVVTGFCIDFFEAVIRELPYDVSYEFIPFEKPDGKTAGNYNDLV 522
Query: 532 RLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPM 590
+ G YDA VGD I+ NR+ DFT P+I+SG+ ++V + + F+ P +
Sbjct: 523 YQVYLGRYDAVVGDTTILVNRSSYVDFTFPFIKSGVGLIVEMTDPVKRDYILFMKPLSWK 582
Query: 591 MWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGR 650
+W + I F VG VW+LE++ N +F GPP+ Q TI WF+FSTM FA +E+ S R
Sbjct: 583 LWLTSFISFFLVGCTVWVLEYKRNPDFSGPPRFQASTICWFAFSTMVFAPRERVFSFWAR 642
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLV 710
SYTASL S+LT QKL+ I + SL +GYQ SF L
Sbjct: 643 ALVIAWYFLVLVLTQSYTASLASLLTSQKLNPTITSMSSLLEKGETVGYQRTSFILGKL- 701
Query: 711 DELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCE-FSIVGQVF 769
E +S LVP ++ EE + L GP KGGV+ + Y LFL C + +V + F
Sbjct: 702 KERGFPQSSLVPFDTAEECDELLSKGPKKGGVSGAFLEIPYLRLFLGQFCNTYKMVEEPF 761
Query: 770 TKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKW 808
+G+GF FP SPL D+S AILK++E+ + W
Sbjct: 762 NVDGFGFVFPIGSPLVADVSRAILKVAESPKAMELERAW 800
Score = 40 (19.1 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 901 ERTSYRSEDEMSSCNSNRK 919
++ SY + EMS C+S+++
Sbjct: 857 DQVSYLDKVEMSPCSSSQQ 875
>TAIR|locus:2066086 [details] [associations]
symbol:GLR2.8 "glutamate receptor 2.8" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828 GO:GO:0071230
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 eggNOG:NOG263961
ProtClustDB:CLSN2683703 EMBL:AJ311495 IPI:IPI00537052 PIR:T02741
RefSeq:NP_180475.2 UniGene:At.13039 ProteinModelPortal:Q9C5V5
EnsemblPlants:AT2G29110.1 GeneID:817459 KEGG:ath:AT2G29110
TAIR:At2g29110 InParanoid:Q9C5V5 OMA:DSEDSIW PhylomeDB:Q9C5V5
Genevestigator:Q9C5V5 GermOnline:AT2G29110 Uniprot:Q9C5V5
Length = 947
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 305/899 (33%), Positives = 470/899 (52%)
Query: 9 LMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGG 68
L F C LF+ + S + +G +L +T K+ +I A+ D D
Sbjct: 11 LSYFVC-LFLLLEVGLGQNQISEIKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYR- 68
Query: 69 TKLKLQMQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQVPLLSFS 127
T+L L ++D A A AL L++ + V AIIGP D++ + + +AN+ QVP +SFS
Sbjct: 69 TRLALHVRDSMKDTVQASAAALDLIQNEQVSAIIGPIDSMQAKFMIKLANKTQVPTISFS 128
Query: 128 ATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDT 187
AT P L+S++ YFVR T D YQ+ AIA I + +GWR V+AIYVD++ G + L D
Sbjct: 129 ATSPLLTSIKSDYFVRGTIDDSYQVKAIAAIFESFGWRSVVAIYVDNELGEGIMPYLFDA 188
Query: 188 LAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGML 247
L + ++ ++ + EA +D+I L K+ ++R+ VVH +F A +GM+
Sbjct: 189 L--QDVQVD-RSVIPSEANDDQILKELYKLMTRQTRVFVVHMASRLASRIFEKATEIGMM 245
Query: 248 GTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK 307
GYVW+ T+ ++ + S ++ I GVL +R++ P S F RW+ +
Sbjct: 246 EEGYVWLMTNGMTHMMRHIHHGRS--LNTIDGVLGVRSHVPKSKGLEDFRLRWKRNFKKE 303
Query: 308 TPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLR-LDSLRIF 366
P L+ +G +AYD+ LA A+ N+S + S ++ L +L +
Sbjct: 304 NPWLRDDLSIFGLWAYDSTTALAMAVEKT-----NISSFPYNNASGSSNNMTDLGTLHVS 358
Query: 367 NGGNLLRDSILQANMTGTAGPARFNS-HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
G L +++ + G AG RFN L +P +EIIN +G R +G+W+ +GL
Sbjct: 359 RYGPSLLEALSEIRFNGLAG--RFNLIDRQLESPKFEIINFVGNEERIVGFWTPSNGLVN 416
Query: 426 VRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVS 485
V S + +R +IWPG++T P+GW P NG+ +++GVP + F FV
Sbjct: 417 VNSNK------TTSFTGERFGPLIWPGKSTIVPKGWEIPTNGKKIKVGVPVKKGFFNFVE 470
Query: 486 VKGSEMTS-----GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVYD 540
V +T+ G+ ID+F AA+ LPY+V + F ++ +LV + G D
Sbjct: 471 VITDPITNITTPKGYAIDIFEAALKKLPYSVIPQYYRFESPDDDYD--DLVYKVDNGTLD 528
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDS-NAWAFLSPFTPMMWGVTAIFF 599
A VGD+ I R+ ADFT PY ESG+ ++ PVR ++ N W FL P+ +W TA FF
Sbjct: 529 AVVGDVTITAYRSLYADFTLPYTESGVSMMVPVRDNENKNTWVFLKPWGLDLWVTTACFF 588
Query: 600 LAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXX 659
+ +G VVW+ EHR+N +FRGPP Q+ T FWFSFSTM FAH+EK VS L R
Sbjct: 589 VLIGFVVWLFEHRVNTDFRGPPHHQIGTSFWFSFSTMVFAHREKVVSNLARFVVVVWCFV 648
Query: 660 XXXXNSSYTASLTSILTVQKLS-SPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDES 718
SYTA+LTS LTVQ+ + I D +++ +Y +GYQ +F +++L+ E + S
Sbjct: 649 VLVLTQSYTANLTSFLTVQRFQPAAINVKDLIKNGDY-VGYQHGAFVKDFLIKE-GFNVS 706
Query: 719 RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQVFTKNGWGFA 777
+L P S EE L +G ++A D+ AY LS C +++IV F G+GFA
Sbjct: 707 KLKPFGSSEECHALLSNG----SISAAFDEVAYLRAILSQYCSKYAIVEPTFKTAGFGFA 762
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLR-SACSSQGAKLDVDRLQLKSFSXXXX 836
FPR+SPL D+S AIL +++ ++Q I +KW ++ + C L +RL L+SF
Sbjct: 763 FPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSSNRLSLRSFWGLFL 822
Query: 837 XXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRS 895
I++ +++ +RH T + R T L F N E ++KS +
Sbjct: 823 IAGIASFLALLIFVFLFLYE-NRH----TLCDDSEDSIWRKLTSL-FRNFDEKDIKSHT 875
>TAIR|locus:2047256 [details] [associations]
symbol:GLR2.2 "glutamate receptor 2.2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:AC007266 GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558
KO:K05387 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 ProtClustDB:CLSN2683132 EMBL:AY072068
IPI:IPI00519275 PIR:B84640 RefSeq:NP_180048.1 UniGene:At.39113
ProteinModelPortal:Q9SHV1 PRIDE:Q9SHV1 EnsemblPlants:AT2G24720.1
GeneID:817008 KEGG:ath:AT2G24720 TAIR:At2g24720 eggNOG:NOG288203
InParanoid:Q9SHV1 OMA:EMPENSN PhylomeDB:Q9SHV1
Genevestigator:Q9SHV1 GermOnline:AT2G24720 Uniprot:Q9SHV1
Length = 920
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 287/813 (35%), Positives = 430/813 (52%)
Query: 7 MLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTL 66
+ L F+C L R Q +G+ V NIG + T+ VA L I ++ D S
Sbjct: 11 LFLFFFFC-LESSR--GQDNGKTQV-NIGVVSDVGTSYPDVAMLCINMSLADFYSSRPQF 66
Query: 67 GGTKLKLQMQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQVPLLS 125
T+L + + D + A A+ L++ + V AI+GP ++ +H + + + +VP++S
Sbjct: 67 Q-TRLVVNVGDSKNDVVGAATAAIDLIKNKQVKAILGPWTSMQAHFLIEIGQKSRVPVVS 125
Query: 126 FSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALG 185
+SAT P+L+SL+ PYF R T D Q+ AI I+ +GWREV+ +Y+D+ G + L
Sbjct: 126 YSATSPSLTSLRSPYFFRATYEDSSQVHAIKAIIKLFGWREVVPVYIDNTFGEGIMPRLT 185
Query: 186 DTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLG 245
D+L RI +++ + + AT+ +I+ L+K+ +R+ +VH + VF A+ LG
Sbjct: 186 DSLQDINVRIPYRSVIPLNATDQDISVELLKMMNMPTRVFIVHMSSSLASTVFIKAKELG 245
Query: 246 MLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTD 305
++ GYVWI T+ + L + + + M+ GVL ++TY P S F SRW+
Sbjct: 246 LMKPGYVWILTNGVMDGLRSINETGIEAME---GVLGIKTYIPKSKDLETFRSRWKR--- 299
Query: 306 AKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQG-GNLSFSKDSRLSDIQGHLRLDSLR 364
+ P + LN YG +AYD LA AI G N++FS ++ LD L
Sbjct: 300 -RFPQ--MELNVYGLWAYDATTALAMAIED---AGINNMTFSNVDTGKNVS---ELDGLG 350
Query: 365 IFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLS 424
+ G L ++ G AG F S G L +EI+N+IGTG R IG+W+ +GL
Sbjct: 351 LSQFGPKLLQTVSTVQFKGLAGDFHFVS-GQLQPSVFEIVNMIGTGERSIGFWTEGNGL- 408
Query: 425 VVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFV 484
V + + S+ L +IWPG+ P+GW P NG+ LRIGVP R+ F + V
Sbjct: 409 VKKLDQEPRSIGTLSTWPDHLKHIIWPGEAVSVPKGWEIPTNGKKLRIGVPKRIGFTDLV 468
Query: 485 SVKGSEMTS-----GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCT--ELVRLITAG 537
V +T+ GFCID F A I +PY V Y+ PF + P+ +LV + G
Sbjct: 469 KVTRDPITNSTVVKGFCIDFFEAVIQAMPYDVSYEFFPFEKPNGEPAGNHNDLVHQVYLG 528
Query: 538 VYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVR-KLDSNAWAFLSPFTPMMWGVTA 596
+DA VGD I+ NR+ DFT P+++SG+ ++ P++ ++ + ++FL P + +W T
Sbjct: 529 QFDAVVGDTTILANRSSFVDFTLPFMKSGVGLIVPLKDEVKRDKFSFLKPLSIELWLTTL 588
Query: 597 IFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXX 656
+FF VG VW LEHR+N +FRGP Q TIFWF+FSTM FA +E+ +S R
Sbjct: 589 VFFFLVGISVWTLEHRVNSDFRGPANYQASTIFWFAFSTMVFAPRERVLSFGARSLVVTW 648
Query: 657 XXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNID 716
SYTASL S+LT Q+L+ I + SL +GYQ SF L +E
Sbjct: 649 YFVLLVLTQSYTASLASLLTSQQLNPTITSMSSLLHRGETVGYQRTSFILGKL-NETGFP 707
Query: 717 ESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCE-FSIVGQVFTKNGWG 775
+S LVP ++ EE + LK GP GGVAA Y LFL C + +V + F +G+G
Sbjct: 708 QSSLVPFDTAEECDELLKKGPKNGGVAAAFLGTPYVRLFLGQYCNTYKMVEEPFNVDGFG 767
Query: 776 FAFPRDSPLAVDISTAILKLSENGDLQRIHDKW 808
F FP SPL D+S AILK++E+ + W
Sbjct: 768 FVFPIGSPLVADVSRAILKVAESPKAVELEHAW 800
>TAIR|locus:2181196 [details] [associations]
symbol:GLR2.1 "glutamate receptor 2.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AF007271 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AK228008 IPI:IPI00532199 PIR:T01809 RefSeq:NP_198062.2
UniGene:At.30826 ProteinModelPortal:O04660 IntAct:O04660
PaxDb:O04660 EnsemblPlants:AT5G27100.1 GeneID:832768
KEGG:ath:AT5G27100 TAIR:At5g27100 eggNOG:NOG323745
InParanoid:O04660 OMA:GWREVAP PhylomeDB:O04660
ProtClustDB:CLSN2683132 Genevestigator:O04660 GermOnline:AT5G27100
Uniprot:O04660
Length = 901
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 291/817 (35%), Positives = 428/817 (52%)
Query: 4 SGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDV-NSD 62
+ ++L ++F+ +F+ ++ +A R + VN+G + T + L I ++ D +S
Sbjct: 5 NNLVLSLLFFVIVFLMQV-GEAQNRITNVNVGIVNDIGTAYSNMTLLCINMSLSDFYSSH 63
Query: 63 PTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQV 121
P T T+L + D + A A AL L+ + V AI+GP ++ + + + + QV
Sbjct: 64 PETQ--TRLVTTVVDSKNDVVTAAAAALDLITNKEVKAILGPWTSMQAQFMIEMGQKSQV 121
Query: 122 PLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGI 181
P++++SAT P+L+S++ YF R T D Q+ AI EI+ +GWREV +YVDD G +
Sbjct: 122 PIVTYSATSPSLASIRSQYFFRATYDDSSQVHAIKEIIKLFGWREVAPVYVDDTFGEGIM 181
Query: 182 AALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVA 241
L D L RI ++ +S AT+DEI+ L+++ +R+ VVH F A
Sbjct: 182 PRLTDVLQEINVRIPYRTVISPNATDDEISVELLRMMTLPTRVFVVHLVELLASRFFAKA 241
Query: 242 QYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWR 301
+G++ GYVWI T+ T D S ++ +QGVL ++TY P S F SRW
Sbjct: 242 TEIGLMKQGYVWILTN---TITDVLSIMNETEIETMQGVLGVKTYVPRSKELENFRSRWT 298
Query: 302 NLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSK-DSR--LSDIQGHL 358
+ P LN YG +AYD LA AI NL+F K D++ +S++QG
Sbjct: 299 K----RFPIS--DLNVYGLWAYDATTALALAIEE--AGTSNLTFVKMDAKRNVSELQG-- 348
Query: 359 RLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWS 418
L + G L ++ + G AG +F +G+L +EI+NV G G R IG+W
Sbjct: 349 ----LGVSQYGPKLLQTLSRVRFQGLAGDFQF-INGELQPSVFEIVNVNGQGGRTIGFWM 403
Query: 419 NYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRV 478
GL + SK SS RL +IWPG TT P+GW P NG+ L+IGVP
Sbjct: 404 KEYGLFKNVDQKPASKT-TFSSWQDRLRPIIWPGDTTSVPKGWEIPTNGKRLQIGVPVNN 462
Query: 479 SFREFVS-----VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRL 533
+F++FV + S + SGF ID F A I +PY + Y IPF DG + LV
Sbjct: 463 TFQQFVKATRDPITNSTIFSGFSIDYFEAVIQAIPYDISYDFIPFQDGGYDA----LVYQ 518
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVR-KLDSNAWAFLSPFTPMMW 592
+ G YDA V D I +NR+ DF+ PY SG+ +V PV+ + ++ FL P T +W
Sbjct: 519 VYLGKYDAVVADTTISSNRSMYVDFSLPYTPSGVGLVVPVKDSVRRSSTIFLMPLTLALW 578
Query: 593 GVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXX 652
++ + F +G VVW+LEHR+N +F GP + Q+ TIFWFSFS M FA +E+ +S R
Sbjct: 579 LISLLSFFIIGLVVWVLEHRVNPDFDGPGQYQLSTIFWFSFSIMVFAPRERVLSFWARVV 638
Query: 653 XXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDE 712
SYTASL S+LT Q L + I+SL + +GYQ +SF L D
Sbjct: 639 VIIWYFLVLVLTQSYTASLASLLTTQHLHPTVTNINSLLAKGESVGYQ-SSFILGRLRDS 697
Query: 713 LNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQVFTK 771
E+ LV SPE L G +GGV+AV+ + Y +FL C ++ +V F
Sbjct: 698 -GFSEASLVSYGSPEHCDALLSKGQAEGGVSAVLMEVPYVRIFLGQYCNKYKMVQTPFKV 756
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKW 808
+G GF FP SPL DIS AILK+ E+ ++ + W
Sbjct: 757 DGLGFVFPIGSPLVADISRAILKVEESNKANQLENAW 793
>TAIR|locus:2066107 [details] [associations]
symbol:GLR2.7 "glutamate receptor 2.7" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005773 "vacuole" evidence=IDA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0034976 "response
to endoplasmic reticulum stress" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY495450
EMBL:AY072069 EMBL:AY080587 IPI:IPI00533666 PIR:T02742
RefSeq:NP_180476.3 UniGene:At.38520 ProteinModelPortal:Q8LGN0
PaxDb:Q8LGN0 PRIDE:Q8LGN0 EnsemblPlants:AT2G29120.1 GeneID:817460
KEGG:ath:AT2G29120 TAIR:At2g29120 eggNOG:NOG263961
InParanoid:Q8LGN0 OMA:DSENSFR PhylomeDB:Q8LGN0
ProtClustDB:CLSN2683703 Genevestigator:Q8LGN0 Uniprot:Q8LGN0
Length = 952
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 255/738 (34%), Positives = 389/738 (52%)
Query: 10 MIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDV---NSDPTTL 66
++F C FV + + + +G +L T+ K+ +I ++ D +SD TT
Sbjct: 18 VLFVCG-FVLMEGCLGQNQTTEIKVGVVLDLHTSFSKLCLTSINISLSDFYKYHSDYTT- 75
Query: 67 GGTKLKLQMQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQVPLLS 125
+L + ++D A + AL L++ + V AIIGP+ ++ + + +A++ QVP ++
Sbjct: 76 ---RLAIHIRDSMEDVVQASSAALDLIKNEQVSAIIGPRTSMQAEFMIRLADKSQVPTIT 132
Query: 126 FSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALG 185
FSAT P L+S+ PYFVR T D Q+ AIA IV +GWR V+AIYVD++ G + L
Sbjct: 133 FSATCPLLTSINSPYFVRATLDDSSQVKAIAAIVKSFGWRNVVAIYVDNEFGEGILPLLT 192
Query: 186 DTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLG 245
D L + + + + EA +D+I L K+ ++R+ VVH G F A+ +G
Sbjct: 193 DALQDVQAFVVNRCLIPQEANDDQILKELYKLMTMQTRVFVVHMPPTLGFRFFQKAREIG 252
Query: 246 MLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTD 305
M+ GYVW+ T + L +N S ++++QGVL +R++ P S + F RW +
Sbjct: 253 MMEEGYVWLLTDGVMNLLKSNERGSS--LENMQGVLGVRSHIPKSKKLKNFRLRWEKMFP 310
Query: 306 AKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNL-SFSKDSRLSDIQGHLRLDSLR 364
K + +N + AYD++ LA A+ N+ S D ++ L +L
Sbjct: 311 KKGNDEE--MNIFALRAYDSITALAMAVEKT-----NIKSLRYDHPIASGNNKTNLGTLG 363
Query: 365 IFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLS 424
+ G L ++ G AG +G L + +++IN+IG+ R IG W +G+
Sbjct: 364 VSRYGPSLLKALSNVRFNGLAGEFEL-INGQLESSVFDVINIIGSEERIIGLWRPSNGI- 421
Query: 425 VVRPETLYSKPPNRSSS-NQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREF 483
+ +K N +S +RL VIWPG++ P+GW P NG+ LR+G+P + F EF
Sbjct: 422 ------VNAKSKNTTSVLGERLGPVIWPGKSKDVPKGWQIPTNGKMLRVGIPVKKGFLEF 475
Query: 484 VSVK----GSEMT-SGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGV 538
V K + MT +G+CI++F A + LPY+V K I F N E+V + G
Sbjct: 476 VDAKIDPISNAMTPTGYCIEIFEAVLKKLPYSVIPKYIAFLSPDENYD--EMVYQVYTGA 533
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
YDA VGD+ I+ NR+ DFT PY ESG+ ++ P++ + N W FL P++ +W TA F
Sbjct: 534 YDAVVGDVTIVANRSLYVDFTLPYTESGVSMMVPLKD-NKNTWVFLRPWSLDLWVTTACF 592
Query: 599 FLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXX 658
F+ +G +VWILEHR+N +FRGPP Q+ T FWF+FSTM FAH+EK VS L R
Sbjct: 593 FVFIGFIVWILEHRVNTDFRGPPHHQIGTSFWFAFSTMNFAHREKVVSNLARFVVLVWCF 652
Query: 659 XXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDES 718
SYTA+LTS TV+ L + L N IGYQ +F R L + DES
Sbjct: 653 VVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLIKFNKNIGYQRGTFVRELLKSQ-GFDES 711
Query: 719 RLVPLNSPEEYAKALKDG 736
+L P S E + +G
Sbjct: 712 QLKPFGSAVECDELFSNG 729
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 214/641 (33%), Positives = 325/641 (50%)
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAI 333
++++QGVL +R++ P S + F RW + K + +N + AYD++ LA A+
Sbjct: 279 LENMQGVLGVRSHIPKSKKLKNFRLRWEKMFPKKGNDEE--MNIFALRAYDSITALAMAV 336
Query: 334 NSFFKQGGNL-SFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
N+ S D ++ L +L + G L ++ G AG
Sbjct: 337 EKT-----NIKSLRYDHPIASGNNKTNLGTLGVSRYGPSLLKALSNVRFNGLAGEFEL-I 390
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS-NQRLYSVIWP 451
+G L + +++IN+IG+ R IG W +G+ + +K N +S +RL VIWP
Sbjct: 391 NGQLESSVFDVINIIGSEERIIGLWRPSNGI-------VNAKSKNTTSVLGERLGPVIWP 443
Query: 452 GQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVK----GSEMT-SGFCIDVFTAAINL 506
G++ P+GW P NG+ LR+G+P + F EFV K + MT +G+CI++F A +
Sbjct: 444 GKSKDVPKGWQIPTNGKMLRVGIPVKKGFLEFVDAKIDPISNAMTPTGYCIEIFEAVLKK 503
Query: 507 LPYAVPYKLIPFGDGHNNPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESG 566
LPY+V K I F N E+V + G YDA VGD+ I+ NR+ DFT PY ESG
Sbjct: 504 LPYSVIPKYIAFLSPDENYD--EMVYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESG 561
Query: 567 LVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVV 626
+ ++ P++ + N W FL P++ +W TA FF+ +G +VWILEHR+N +FRGPP Q+
Sbjct: 562 VSMMVPLKD-NKNTWVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIG 620
Query: 627 TIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKG 686
T FWF+FSTM FAH+EK VS L R SYTA+LTS TV+ L +
Sbjct: 621 TSFWFAFSTMNFAHREKVVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTN 680
Query: 687 IDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVV 746
L N IGYQ +F R L + DES+L P S E + +G + A
Sbjct: 681 WKDLIKFNKNIGYQRGTFVRELLKSQ-GFDESQLKPFGSAVECDELFSNGT----ITASF 735
Query: 747 DDRAYAELFLSTRC-EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIH 805
D+ AY ++ LS ++++V F G+GF FP+ SPL D+S AIL +++ ++Q I
Sbjct: 736 DEVAYIKVILSQNSSKYTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIE 795
Query: 806 DKWLLR-SACSSQGAKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGD 864
+KW + + C L + L L SF I++ +++ +H D
Sbjct: 796 NKWFKKPNNCPDLNTSLSSNHLSLSSFWGLFLIAGIASFLALLIFVANFLYEH-KHTLFD 854
Query: 865 TESNGGSSRSARLQTFLSFVNEKEDEVKSRS-KRRHVERTS 904
N S R +L+ + +EK+ +KS K V S
Sbjct: 855 DSEN--SFRG-KLKFLVRNFDEKD--IKSHMFKENAVHNVS 890
>TAIR|locus:2066148 [details] [associations]
symbol:GLR2.9 "glutamate receptor 2.9" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
eggNOG:NOG263961 ProtClustDB:CLSN2683703 IPI:IPI00520184 PIR:T02740
RefSeq:NP_180474.1 UniGene:At.52963 ProteinModelPortal:O81078
IntAct:O81078 PaxDb:O81078 PRIDE:O81078 EnsemblPlants:AT2G29100.1
GeneID:817458 KEGG:ath:AT2G29100 TAIR:At2g29100 InParanoid:O81078
OMA:WIFTESA PhylomeDB:O81078 Genevestigator:O81078
GermOnline:AT2G29100 Uniprot:O81078
Length = 940
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 211/624 (33%), Positives = 327/624 (52%)
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAI 333
++ I+GVL +R++ P S F RW+ + + P+ LN + +AYD++ LA+A+
Sbjct: 267 LNTIEGVLGVRSHVPKSKELGDFRLRWKRTFEKENPSMRDDLNVFALWAYDSITALAKAV 326
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ +L + S LS + L ++ + G L+ + + G AG +
Sbjct: 327 EKANTK--SLWYDNGSTLS--KNRTDLGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLID- 381
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQR-LYSVIWPG 452
G L +P +EIIN +G R IG+W+ GL + +SSN++ L VIWPG
Sbjct: 382 GQLQSPKFEIINFVGNEERIIGFWTPRDGLM------------DATSSNKKTLGPVIWPG 429
Query: 453 QTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTS-----GFCIDVFTAAINLL 507
++ P+GW P G+ LR+GVP + F +FV V + +T+ G+ I++F AA+ L
Sbjct: 430 KSKIVPKGWEIP--GKKLRVGVPMKKGFFDFVKVTINPITNKKTPTGYAIEIFEAALKEL 487
Query: 508 PYAVPYKLIPFGDGHNNPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL 567
PY V + + F + NN + LV + +DA VGDI I NR+ ADFT P+ ESG+
Sbjct: 488 PYLVIPEYVSF-ESPNNYN--NLVYQVYDKTWDAVVGDITITANRSLYADFTLPFTESGV 544
Query: 568 VVVAPVRKLDS-NAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVV 626
++ PVR ++ + W FL P++ +W T FF+ +G VVW+ EHR+N +FRGPP+ Q+
Sbjct: 545 SMMVPVRDNENKDTWVFLEPWSLELWVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQYQIG 604
Query: 627 TIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKG 686
T WFSFSTM FAH+E VS L R SYTASLTS LTVQ L +
Sbjct: 605 TSLWFSFSTMVFAHRENVVSNLARFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTN 664
Query: 687 IDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVV 746
++ L + +GYQ +F ++ L+ L E +L P +S ++ L G KG +AA
Sbjct: 665 VNDLIKNRDCVGYQGGAFVKDILLG-LGFHEDQLKPFDSAKDADDLLSKGKSKG-IAAAF 722
Query: 747 DDRAYAELFLSTRC-EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIH 805
D+ AY + LS C ++ +V F G+GFAFP++SPL + S AIL L++N Q+I
Sbjct: 723 DEVAYLKAILSQSCSKYVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIE 782
Query: 806 DKWL-LRSACSSQGAKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGD 864
D+W ++ C L +RL L SF +++ +++ RH GD
Sbjct: 783 DRWFPKKNDCPDPMTALSSNRLNLSSFLGLFLIAGTAISFSLLVFVALFLYEH-RHTLGD 841
Query: 865 TESNGGSSRSARLQTFLSFVNEKE 888
+ S +L+ +EK+
Sbjct: 842 DSED---SLWRKLKFLFKIFDEKD 862
Score = 506 (183.2 bits), Expect = 3.1e-45, P = 3.1e-45
Identities = 136/425 (32%), Positives = 220/425 (51%)
Query: 1 MKLSGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVN 60
MK + L F C + + + S + +G +L +T K+ +IK AV D
Sbjct: 1 MKTNNTFL-SYFVCGFLLMGV-GLGQNQTSEIKVGVVLDLNTTFSKICLTSIKMAVSDFY 58
Query: 61 SD-PTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANE 118
+D P L T+L L ++D A A AL L++ + V AIIGP +++ + + +AN+
Sbjct: 59 ADHPNYL--TRLTLHVRDSMEDTVQASAAALDLIKTEQVSAIIGPINSMQADFMIKLANK 116
Query: 119 LQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR 178
QVP ++FSAT P L+S++ PYFVR T D Q+ AIA I + WR V+AIYVD++ G
Sbjct: 117 TQVPTITFSATSPLLTSIKSPYFVRATIDDSSQVRAIASIFKFFRWRRVVAIYVDNEFGE 176
Query: 179 NGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVF 238
+ L D L + S P EA +DEI L K+ ++R+ VVH + VF
Sbjct: 177 GFMPFLFDALQDVEVKRSVIPP---EAIDDEIQKELRKLMERQARVFVVHMESSLALRVF 233
Query: 239 HVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFIS 298
+A+ +GM+ GYVW+ T+ ++ + + S ++ I+GVL +R++ P S F
Sbjct: 234 QIARDIGMMEEGYVWLMTNGMTHMMRHINNGRS--LNTIEGVLGVRSHVPKSKELGDFRL 291
Query: 299 RWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHL 358
RW+ + + P+ LN + +AYD++ LA+A+ + +L + S LS +
Sbjct: 292 RWKRTFEKENPSMRDDLNVFALWAYDSITALAKAVEKANTK--SLWYDNGSTLS--KNRT 347
Query: 359 RLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWS 418
L ++ + G L+ + + G AG + G L +P +EIIN +G R IG+W+
Sbjct: 348 DLGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLID-GQLQSPKFEIINFVGNEERIIGFWT 406
Query: 419 NYSGL 423
GL
Sbjct: 407 PRDGL 411
>TAIR|locus:2166001 [details] [associations]
symbol:ATGLR1.2 species:3702 "Arabidopsis thaliana"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005217
"intracellular ligand-gated ion channel activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0016036
"cellular response to phosphate starvation" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
[GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0042631
"cellular response to water deprivation" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072064 EMBL:AY072065
IPI:IPI00536526 IPI:IPI00547562 RefSeq:NP_199651.1
RefSeq:NP_851155.1 UniGene:At.29852 ProteinModelPortal:Q9LV72
IntAct:Q9LV72 PRIDE:Q9LV72 EnsemblPlants:AT5G48400.2 GeneID:834895
KEGG:ath:AT5G48400 TAIR:At5g48400 eggNOG:NOG313824
InParanoid:Q9LV72 OMA:FNANEDY PhylomeDB:Q9LV72
Genevestigator:Q9LV72 GermOnline:AT5G48400 Uniprot:Q9LV72
Length = 867
Score = 546 (197.3 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 145/447 (32%), Positives = 231/447 (51%)
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L ++I ++ G +G + + L++ +EI+N+IG+G RR+G+W N +G
Sbjct: 353 LLEAIKESRFKGLSGNFQLDDM-KLLSDKFEIVNMIGSGERRVGFW-NSNGS-------- 402
Query: 432 YSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRH-LRIGVPNRVSFREFVSVKGSE 490
+S SS++ L ++IWPG + Q P+G +GR LR+ V + F + V+
Sbjct: 403 FSNRRQLSSTHDNLETIIWPGGSAQSPKGRSLRESGRKKLRVLVTSSNRFPRLMKVETDP 462
Query: 491 MT------SGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITA--GVYDAA 542
+T GFCI+VF A+I Y V Y I + +G N T+L + + YDAA
Sbjct: 463 ITHEITIVEGFCIEVFQASIAPFNYEVEY--IRWLNGTNY---TKLAYALHSQKDKYDAA 517
Query: 543 VGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
VGDI I ++R+ DFT PY E GL +VA + + W F P TP +W +A FF+
Sbjct: 518 VGDITITSDRSMYVDFTLPYTEMGLGIVAAKER---SMWVFFQPLTPNLWITSAAFFVLT 574
Query: 603 GAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXXXXX 662
G +VW++E N EF+G +Q+ + WF FST+ +AH+EK L R
Sbjct: 575 GIIVWLIERAENKEFQGSWPQQIGVVIWFGFSTLVYAHREKLQHNLSRFVVTVWVFAVLI 634
Query: 663 XNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLVP 722
+SYTA+LTS++TVQ++ + +Y +G+ S N + ++ RL+
Sbjct: 635 LVTSYTATLTSMMTVQQIRFNA-------NEDY-VGHLSGSLIANAALTNSSLRAMRLLG 686
Query: 723 LNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQVFTKNGWGFAFPRD 781
LN+ E+YA+AL + V+ +V + Y ++ L F +V T NG+GF F +
Sbjct: 687 LNTSEDYAQALMNK----SVSYIVSELPYLKILLGENPGHFLMVKTQSTTNGFGFMFQKG 742
Query: 782 SPLAVDISTAILKLSENGDLQRIHDKW 808
S LA ++S I KL + L + +W
Sbjct: 743 SELAPNVSREIAKLRTSERLNEMERRW 769
Score = 305 (112.4 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 99/406 (24%), Positives = 183/406 (45%)
Query: 3 LSGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSD 62
LS +++L+ F F R V +G +L + GK+ + ++ A+ D +
Sbjct: 12 LSFLLVLLFFISNCFASSQNNDDDKRIRV-RVGLVLDLGSVEGKIVRSSVSMALSDFYDN 70
Query: 63 PTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQV 121
T+L L ++D + LAL + L++ + V AIIG + + +++ + + +V
Sbjct: 71 HNDYK-TRLSLLVRDSHGEPLLALDSVVDLLQTEGVQAIIGGNSLLEAKLLAELGEKARV 129
Query: 122 PLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGI 181
P++S ++ +LS ++ + ++ T + ++ I + + W V + D D R +
Sbjct: 130 PVISLNSP-MSLSLSKYTHLIQATHNSASEVKGITAFLHGFDWNSVALVLEDHDDWRESM 188
Query: 182 AALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVA 241
+ D + K SV ++ED + D L ++ + + VVH +F A
Sbjct: 189 HFMVDHFHENNVHVQSKVAFSVTSSEDSLMDRLRELKDLGTTVFVVHLSEVIATRLFPCA 248
Query: 242 QYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDD-IQGVLTLRTYTPDSVLKRKFISRW 300
+ LGM+G G+ WI TS ++ + F D+ + ++GV+ ++Y P S F RW
Sbjct: 249 EKLGMMGEGFAWILTSRSMSSF--HDQFIDDLTKEAMEGVVGFKSYIPMSKELHNFTLRW 306
Query: 301 RNLTDAKTPNG--YIGLNAYGFYAYDTVWLLARA--INSFFKQGGNLSFS-KDSRLSDIQ 355
R + G L+ G +A+D W LA A + L + K+SR +
Sbjct: 307 RKTLPVEEVTGSEITRLSISGVWAHDVAWSLASAAEVTRMPTVTSTLLEAIKESRFKGLS 366
Query: 356 GHLRLDSLRIFNGGNLLRDSILQANMTGTAGPAR---FNSHGDLIN 398
G+ +LD ++ LL D NM G+ G R +NS+G N
Sbjct: 367 GNFQLDDMK------LLSDKFEIVNMIGS-GERRVGFWNSNGSFSN 405
Score = 43 (20.2 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 590 MMWGVTAIFFLAVGAVVWILE 610
M+ GV+ F LAV ++W+ E
Sbjct: 795 MITGVSFAFALAVLLILWLRE 815
>TAIR|locus:2166006 [details] [associations]
symbol:GLR1.3 "glutamate receptor 1.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 ProtClustDB:CLSN2684267
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AY091121 EMBL:AY142599 IPI:IPI00522082 RefSeq:NP_199652.1
UniGene:At.66754 UniGene:At.70447 ProteinModelPortal:Q9FH75
PRIDE:Q9FH75 EnsemblPlants:AT5G48410.1 GeneID:834896
KEGG:ath:AT5G48410 TAIR:At5g48410 eggNOG:NOG270167
InParanoid:Q9FH75 OMA:FRASISP PhylomeDB:Q9FH75
Genevestigator:Q9FH75 GermOnline:AT5G48410 Uniprot:Q9FH75
Length = 860
Score = 549 (198.3 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 145/453 (32%), Positives = 236/453 (52%)
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
+R+ N + L + I + G +G + N L++ +EIIN+IG+ RR+G+ N +G
Sbjct: 342 IRMPNVTSTLLEEITKTRFNGLSGDFQLNDK-KLLSNKFEIINMIGSSERRVGFL-NSNG 399
Query: 423 LSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGW-VFPNNGRHLRIGVPNRVSFR 481
+S + SS++ +L ++IWPG + Q P+G + ++ + LR+ V + F
Sbjct: 400 S--------FSNRRHLSSTHNKLETIIWPGGSAQSPKGTSLIDSDRKKLRVLVTSSNRFP 451
Query: 482 EFVSVKGSEMTS-----GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITA 536
+ V+ +T+ GFCI+VF A+I+ Y V Y IP+ +G N + +
Sbjct: 452 RLMKVETDPVTNELIVEGFCIEVFRASISPFNYEVEY--IPWLNGSNYDNLAYALHS-QK 508
Query: 537 GVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTA 596
YDAAVGDI I +NR+ DFT P+ E GL +VA V+ + + W F P TP +W +A
Sbjct: 509 DKYDAAVGDITITSNRSTYVDFTLPFTEMGLGIVA-VK--ERSMWVFFQPLTPDLWITSA 565
Query: 597 IFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXX 656
FF+ G +VW++E N EF+G +Q+ + WF FST+ +AH+EK L R
Sbjct: 566 FFFVLTGVIVWLIERAENKEFQGSWPQQIGVVLWFGFSTLVYAHREKLKHNLSRFVVTVW 625
Query: 657 XXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNID 716
+SYTA+LTS++TVQ++ +S + +Y +G+ S N + ++
Sbjct: 626 VFAVLILTASYTATLTSMMTVQQIR-----FNS--NEDY-VGHLSGSLIANVALTSSSLR 677
Query: 717 ESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTR-CEFSIVGQVFTKNGWG 775
R + LNS +YA+AL + V+ VVD+ Y ++ L F +V T NG+G
Sbjct: 678 AMRSLGLNSAADYAQALLNKT----VSFVVDELPYLKVVLGENPTHFFMVKTQSTTNGFG 733
Query: 776 FAFPRDSPLAVDISTAILKLSENGDLQRIHDKW 808
F F + L ++S I KL + L + +W
Sbjct: 734 FMFQKGFELVPNVSREISKLRTSEKLNEMEKRW 766
Score = 274 (101.5 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 78/333 (23%), Positives = 153/333 (45%)
Query: 3 LSGVMLLMIFYCELFVYRITAQASGRPSV-VNIGALLSFSTNVGKVAKLAIKAAVDDVNS 61
LS +++L++F F G V + +G +L + GK+ K ++ A+ +
Sbjct: 12 LSFLLVLLLFISRSFASTKNDDVDGGKRVQIRVGLVLDLGSLKGKIVKNSVSMALSYFYA 71
Query: 62 DPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQ 120
T++ + +++ + LALA A+ L++ + V AIIG + + ++ + + +
Sbjct: 72 IHNDYK-TRVSVSLRNSHGEPLLALASAVDLLKTEGVEAIIGGNSLLEAKLLGELGEKAR 130
Query: 121 VPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNG 180
VP++S + +LS ++ + ++ T + I ++ + W V +Y D D R
Sbjct: 131 VPMISLDSPF-SLSLSKYTHLIQATHDSTSEAKGITSFINVFDWNSVALVYEDHDDWRES 189
Query: 181 IAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHV 240
+ L + R+ K +V ++ED + L ++ + + VVH +F
Sbjct: 190 MQLLVEHFHENGVRVQSKVGFTVSSSEDFVMGRLQQLKDLGTTVFVVHLSEVIATHLFPC 249
Query: 241 AQYLGMLGTGYVWIATSWLSTALDTN-SPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR 299
A+ LG++G G+VWI T+ + N F M+ GV+ ++Y P S+ + F R
Sbjct: 250 ARRLGLMGDGFVWILTAKTMNSFHENIDDFTKQAME---GVVGFKSYIPMSIELQNFTLR 306
Query: 300 WRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
WR + L+ G +A+D + LARA
Sbjct: 307 WRKSLPVEEAE-LTRLSISGIWAHDIAFALARA 338
Score = 39 (18.8 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 308 TPNGYIGLNAYGFYAYDT-VWLLARAINSFFKQG 340
TP+ +I +A+ F VWL+ RA N F QG
Sbjct: 557 TPDLWI-TSAFFFVLTGVIVWLIERAENKEF-QG 588
>TAIR|locus:2079681 [details] [associations]
symbol:GLR1.4 "glutamate receptor 1.4" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005261 "cation channel activity"
evidence=IDA] [GO:0005262 "calcium channel activity" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=IDA] [GO:0030003
"cellular cation homeostasis" evidence=RCA;IDA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC009853 GO:GO:0030003
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072066 EMBL:AY072067
IPI:IPI00529459 RefSeq:NP_187408.2 UniGene:At.40336
ProteinModelPortal:Q8LGN1 STRING:Q8LGN1 PaxDb:Q8LGN1 PRIDE:Q8LGN1
EnsemblPlants:AT3G07520.1 GeneID:819940 KEGG:ath:AT3G07520
TAIR:At3g07520 eggNOG:NOG295667 InParanoid:Q8LGN1 OMA:NENIGFF
PhylomeDB:Q8LGN1 ArrayExpress:Q8LGN1 Genevestigator:Q8LGN1
GermOnline:AT3G07520 Uniprot:Q8LGN1
Length = 861
Score = 534 (193.0 bits), Expect = 4.2e-74, Sum P(2) = 4.2e-74
Identities = 148/450 (32%), Positives = 224/450 (49%)
Query: 379 ANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNR 438
A G +G +F I+ +EI+N+IG G R +G W++ S +S R R
Sbjct: 363 AKHKGLSGDIKFIDK-KFISDKFEIVNMIGRGERSVGLWNSGSFISNRR---------RR 412
Query: 439 SSSNQRLYSVIWPGQTTQKP--RGWVFPNNGRH--LRIGVPNRVSFREFVSVK-----GS 489
SS + L ++IWPG +T+ P R +G+ LR+ VP + + VK G
Sbjct: 413 LSSTKALETIIWPGGSTRIPKIRSLKEKRHGKKKKLRVLVPAGNITPQILEVKTDFKTGV 472
Query: 490 EMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITA--GVYDAAVGDIA 547
+G+CIDVF +I LP+ + IP+ N + +LV + + YDAAVGDI
Sbjct: 473 TAATGYCIDVFETSI--LPFNYEVEYIPWPGAINYKNYNDLVYTLYSQKDKYDAAVGDIT 530
Query: 548 IITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVW 607
I NR+ DFT P+ + GL VV D + W P T +W A FF+ GA+VW
Sbjct: 531 ITDNRSLYVDFTLPFTDMGLAVVTAK---DKSMWIIFKPLTLSLWLTIASFFILTGAIVW 587
Query: 608 ILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXXXXXXNSSY 667
++E N +F+G +Q+ T+ F FST+ FAH+E+ + R S+Y
Sbjct: 588 LIERHDNADFQGSCFQQIGTLLCFGFSTLVFAHRERLQHNMSRFVVIVWIFAVLILTSNY 647
Query: 668 TASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLVPLNSPE 727
TA+LTS++TVQ+ I+G+ SN IG+ S A N + D R L + +
Sbjct: 648 TATLTSVMTVQQ----IRGL----KSNENIGFFSASIAANVVNDNPTFQGPRYKGLKTAD 699
Query: 728 EYAKALKDGPHKGGVAAVVDDRAYAELFLSTR-CEFSIVGQVFTKNGWGFAFPRDSPLAV 786
++ AL++G ++ +VD+ Y +LF++ EF IV NG+GFAF + SPL
Sbjct: 700 DFTNALRNGT----ISFIVDEVPYVKLFVAKHPSEFVIVETESVTNGFGFAFQKGSPLVQ 755
Query: 787 DISTAILKLSENGDLQRIHDKWLLRSACSS 816
+S I KL L+ I + W R S+
Sbjct: 756 KVSREIEKLRRTEKLKAIENWWFQRQTTSA 785
Score = 287 (106.1 bits), Expect = 4.2e-74, Sum P(2) = 4.2e-74
Identities = 81/306 (26%), Positives = 142/306 (46%)
Query: 32 VNIGALLSFSTNVGKVAKLAIKAAVDD---VNSDPTTLGGTKLKLQMQDCNHSGFLALAE 88
V IG ++ + GK+ +I A+ D VN+ T ++ + +D + ALA
Sbjct: 46 VRIGLVVDMGSMEGKLVTTSISMALSDFYHVNNGYRT----RVSVLSRDSHGDPLQALAA 101
Query: 89 ALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQS 147
A+ L++ + V A++G Q + + ++ + + +VP++S +LS ++ YF++ T
Sbjct: 102 AMDLLQTEQVEALVGGQSLLEAKNLAELGEKTKVPVISSFQVPSSLSLAKYNYFIQATHD 161
Query: 148 DQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATE 207
+ IA + ++ WR + IY DDD R I L I +KA SV + E
Sbjct: 162 TSSEAKGIAALFSNFDWRTAVLIYEDDDDWRESIQPLVGHFQQNAIHIEYKAEFSVSSNE 221
Query: 208 DEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSW-LSTALDTN 266
+ I L K + RI V H +F A+ LGM+ GY WI T+ ++ DTN
Sbjct: 222 ECIMKQLRKFKASGIRIFVAHISERIANRLFPCARRLGMMEEGYAWILTARSMNNFQDTN 281
Query: 267 SPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTV 326
++++GV+ ++Y P + F RW+ + ++ +A+D
Sbjct: 282 YL----AKEEMEGVIGFKSYIPLTEELHNFTLRWKR--SLRLEEVVTRMSVCSIWAHDIA 335
Query: 327 WLLARA 332
W LARA
Sbjct: 336 WSLARA 341
>TAIR|locus:2102975 [details] [associations]
symbol:GLR1.1 "glutamate receptor 1.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0005261
"cation channel activity" evidence=IDA] [GO:0005262 "calcium
channel activity" evidence=IDA] [GO:0005267 "potassium channel
activity" evidence=IDA] [GO:0005272 "sodium channel activity"
evidence=IDA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0006814 "sodium ion transport" evidence=IDA] [GO:0006816
"calcium ion transport" evidence=IDA] [GO:0030003 "cellular cation
homeostasis" evidence=RCA;IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0006569 "tryptophan catabolic
process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
process" evidence=RCA] [GO:0070838 "divalent metal ion transport"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009738
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0005267 GO:GO:0005272 InterPro:IPR001828 EMBL:AC016829
GO:GO:0071230 GO:GO:0030003 GO:GO:0005234 EMBL:AF079998
EMBL:AK117584 IPI:IPI00529222 PIR:T51138 RefSeq:NP_187061.1
UniGene:At.18800 ProteinModelPortal:Q9M8W7 STRING:Q9M8W7
TCDB:1.A.10.1.7 EnsemblPlants:AT3G04110.1 GeneID:819566
KEGG:ath:AT3G04110 GeneFarm:2528 TAIR:At3g04110 eggNOG:NOG253648
HOGENOM:HOG000239558 InParanoid:Q9M8W7 KO:K05387 OMA:IRFSENE
PhylomeDB:Q9M8W7 ProtClustDB:CLSN2684267 Genevestigator:Q9M8W7
GermOnline:AT3G04110 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 Uniprot:Q9M8W7
Length = 808
Score = 353 (129.3 bits), Expect = 3.5e-53, Sum P(3) = 3.5e-53
Identities = 87/249 (34%), Positives = 126/249 (50%)
Query: 440 SSNQRLYSVIWPGQTTQKPRGWVFPNNGRH--LRI----G--VPNRVSFREFVSVKGSEM 491
S +QR ++WPG++ + PR V G LR+ G VP+ VS R G
Sbjct: 392 SFSQRR-QIVWPGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPET-GVNT 449
Query: 492 TSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVYDAAVGDIAIITN 551
SGFC++VF I P+ + IP+ NN + L+ YDAAVGDI I +N
Sbjct: 450 VSGFCVEVFKTCI--APFNYELEFIPYRG--NNDNLAYLLST-QRDKYDAAVGDITITSN 504
Query: 552 RTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEH 611
R+ DFT PY + G+ ++ V+K W F PF +W + FF+ G VVW++E
Sbjct: 505 RSLYVDFTLPYTDIGIGILT-VKKKSQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVER 563
Query: 612 RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALGRXXXXXXXXXXXXXNSSYTASL 671
+N EF+G +Q+ + WF FST+ FAH+EK R SSY+A+L
Sbjct: 564 SVNPEFQGSWGQQLSMMLWFGFSTIVFAHREKLQKMSSRFLVIVWVFVVLILTSSYSANL 623
Query: 672 TSILTVQKL 680
TS T+ ++
Sbjct: 624 TSTKTISRM 632
Score = 226 (84.6 bits), Expect = 3.5e-53, Sum P(3) = 3.5e-53
Identities = 75/335 (22%), Positives = 149/335 (44%)
Query: 32 VNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAEALH 91
V +G ++ S+ GK+ + + A+ D T++ + ++D +ALA A
Sbjct: 30 VRVGLVVDLSSIQGKILETSFNLALSDFYGINNGYR-TRVSVLVRDSQGDPIIALAAATD 88
Query: 92 LMEG-QTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQY 150
L++ + AI+G Q + +++ ++ + +VP++S + TLS ++ F++ T
Sbjct: 89 LLKNAKAEAIVGAQSLQEAKLLATISEKAKVPVISTFLPN-TLSLKKYDNFIQWTHDTTS 147
Query: 151 QMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT-EDE 209
+ I ++ + + V+ IY D D + L + K I+ A +V ++ E+
Sbjct: 148 EAKGITSLIQDFSCKSVVVIYEDADDWSESLQILVENFQDKGIYIARSASFAVSSSGENH 207
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPF 269
+ + L K+ ++ + + VVH +F + LG++ + WI T+ L+ +
Sbjct: 208 MMNQLRKLKVSRASVFVVHMSEILVSRLFQCVEKLGLMEEAFAWILTARTMNYLEHFA-- 265
Query: 270 PSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLL 329
+ +QGV+ ++Y P S + F SR R T + + G A+D +L
Sbjct: 266 ---ITRSMQGVIGFKSYIPVSEEVKNFTSRLRKRMGDDTETEHSSV-IIGLRAHDIACIL 321
Query: 330 ARAINSFFKQGG-NLSFSKDSRLSDIQGHLRLDSL 363
A A+ F G S + + L D H R L
Sbjct: 322 ANAVEKFSVSGKVEASSNVSADLLDTIRHSRFKGL 356
Score = 103 (41.3 bits), Expect = 3.5e-53, Sum P(3) = 3.5e-53
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 718 SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRC-EFSIVGQVFTKNGWGF 776
++L +N+ E YA+ L+DG + V+++ Y + + +F + +V NG+GF
Sbjct: 649 AKLGSINAVEAYAQLLRDGT----LNHVINEIPYLSILIGNYPNDFVMTDRVTNTNGFGF 704
Query: 777 AFPRDSPLAVDISTAILKLSENGDLQRIHDKW 808
F + S L +S I KL G L+ + KW
Sbjct: 705 MFQKGSDLVPKVSREIAKLRSLGMLKDMEKKW 736
Score = 102 (41.0 bits), Expect = 4.2e-26, Sum P(3) = 4.2e-26
Identities = 43/153 (28%), Positives = 66/153 (43%)
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L D+I + G +G + S I+ +EI+N+ RRIG WS G R + +
Sbjct: 344 LLDTIRHSRFKGLSGDIQI-SDNKFISETFEIVNIGREKQRRIGLWSG--GSFSQRRQIV 400
Query: 432 YSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEM 491
+ P RS R + V+ + +K V G VP+ VS R G
Sbjct: 401 W---PGRSRKIPR-HRVL--AEKGEKKVLRVLVTAGNK----VPHLVSVRPDPET-GVNT 449
Query: 492 TSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNN 524
SGFC++VF I P+ + IP+ ++N
Sbjct: 450 VSGFCVEVFKTCI--APFNYELEFIPYRGNNDN 480
>FB|FBgn0038837 [details] [associations]
symbol:CG3822 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0015277 HSSP:P19491 OrthoDB:EOG4FQZ6P
EMBL:AY119103 ProteinModelPortal:Q8MS48 SMR:Q8MS48 PaxDb:Q8MS48
PRIDE:Q8MS48 FlyBase:FBgn0038837 InParanoid:Q8MS48
ArrayExpress:Q8MS48 Bgee:Q8MS48 Uniprot:Q8MS48
Length = 853
Score = 162 (62.1 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 54/223 (24%), Positives = 99/223 (44%)
Query: 484 VSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTE---LVRLITAGVY 539
+ + G++ G+ +D+ L + +L+P G G N E ++R +
Sbjct: 436 IPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRA 495
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVV--APVRKLDSNAWAFLSPFTPMMWGVTAI 597
D A+ D+ I R + DFT P++ G+ ++ P+++ N ++FLSP + +W A
Sbjct: 496 DLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQ-PPNLFSFLSPLSLDVWIYMAT 554
Query: 598 FFLAVGAVVWIL------EHRLNDEFRGPPKRQVVTIF---WFSFSTMFFAHKEKTVSAL 648
+L V +++IL E + G T+ WF+ ++ + AL
Sbjct: 555 AYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFTLLNCMWFAIGSLMQQGCDFLPKAL 614
Query: 649 G-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
R SSYTA+L + LTV+++ SPI+ + L
Sbjct: 615 STRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDL 657
Score = 161 (61.7 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 72/263 (27%), Positives = 119/263 (45%)
Query: 1 MKLSGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVN 60
M+ SGV++L + +L + AQ+ P ++ IG L + + +LA + AVD +N
Sbjct: 1 MRSSGVLVLPLLLLQLILNCRKAQSL--PDIIKIGGLFHPADDH---QELAFRQAVDRIN 55
Query: 61 SDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANEL 119
+D + L +KL Q++ + F A L+ AI GPQ + T+ V + + +
Sbjct: 56 ADRSILPRSKLVAQIERISPFDSFHAGKRVCGLLNIGVAAIFGPQSSHTASHVQSICDNM 115
Query: 120 QVPLLSFSATDPTL---SSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDH 176
++P L + D L S L Y T S Y +IV H+GW+ IY ++D
Sbjct: 116 EIPHLE-NRWDYRLRRESCLVNLYPHPNTLSKAY-----VDIVRHWGWKTFTIIYENND- 168
Query: 177 GRNGIAALGDTLAAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRG 234
GI L + L A F P++V D + LL ++ + IV+ R
Sbjct: 169 ---GIVRLQELLKAHGMT-PF--PITVRQLSDSGDYRPLLKQIKNSAEAHIVLDCSTERI 222
Query: 235 PVVFHVAQYLGMLGTGYVWIATS 257
V AQ +GM+ + ++ TS
Sbjct: 223 HEVLKQAQQIGMMSDYHSYLVTS 245
Score = 133 (51.9 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 43/152 (28%), Positives = 71/152 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFARNYLVDELNIDESRLVP 722
SSYTA+L + LTV+++ SPI+ + L + + G + S A + +++ +
Sbjct: 632 SSYTANLAAFLTVERMDSPIESAEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSF 691
Query: 723 LNS--PEEYAKALKDGPH---KG-GVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGF 776
+ S P + + +G KG G A + + E CE + VG + +G
Sbjct: 692 MESARPSVFTVSNGEGVERVAKGKGSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGI 751
Query: 777 AFPRDSPLAVDISTAILKLSENGDLQRIHDKW 808
A P +SP I++ ILKL E G L + KW
Sbjct: 752 ATPPNSPYRTAINSVILKLQEEGKLHILKTKW 783
Score = 50 (22.7 bits), Expect = 8.6e-29, Sum P(4) = 8.6e-29
Identities = 22/97 (22%), Positives = 39/97 (40%)
Query: 323 YDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMT 382
YD V L A+A++ S+ DI + D + G L + + M
Sbjct: 305 YDAVHLFAKALHDL----------DTSQQIDIHP-ISCDGQSTWQHGFSLINYMKIVEMK 353
Query: 383 GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSN 419
G +F+ G + +I+ + G R+IG W++
Sbjct: 354 GLTNVIKFDHQGFRADFMLDIVELTPAGIRKIGTWNS 390
Score = 38 (18.4 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 379 ANMTGTAGPARFNSHGDLINPAYEIIN 405
A T PA ++HG+ + + ++N
Sbjct: 567 AKFTPYEWPAYTDAHGEKVESQFTLLN 593
>UNIPROTKB|F1P5Y1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0032590 "dendrite
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0032281 GO:GO:0031623 GO:GO:0032590
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:ARIMQQW EMBL:AADN02028659 EMBL:AADN02028660
IPI:IPI00820450 ProteinModelPortal:F1P5Y1
Ensembl:ENSGALT00000040661 Uniprot:F1P5Y1
Length = 904
Score = 169 (64.5 bits), Expect = 3.7e-28, Sum P(3) = 3.7e-28
Identities = 80/322 (24%), Positives = 136/322 (42%)
Query: 131 PTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA 190
P +S QF +R D A+ +++HY W++ + IY D D G + + + DT A
Sbjct: 114 PVETSNQFVLQLRPELQD-----ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAE 167
Query: 191 KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTG 250
K +++ A + TE+ L ++ + R++VV R ++ L G G
Sbjct: 168 KNWQVT--AVNILTTTEEGYRVLFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNG 225
Query: 251 YVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPN 310
Y +I + +D S ++ G L YT D+V R + +WRN + P
Sbjct: 226 YHYILANMGFMDIDLTKFRESGA--NVTG-FQLVNYT-DTVPAR-IMQQWRNNDARELPR 280
Query: 311 -GYIGLNA-Y-GFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFN 367
+ A Y YD V ++A A + +Q + S+ D + + +
Sbjct: 281 VDWKRPKATYTSALTYDGVRVMAEAFQNLRRQ--RIDISRRGNAGDCLANPAVP----WG 334
Query: 368 GGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G ++ ++ Q G +G +FN G N +I + G R+IGYW+ L V
Sbjct: 335 QGIDIQRALQQVRFEGLSGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLVPVA 394
Query: 428 PETLYSKPPNRSSSNQ-RLYSV 448
+T + N S+S Q R Y V
Sbjct: 395 IDT---QTGNESTSLQNRTYIV 413
Score = 147 (56.8 bits), Expect = 3.7e-28, Sum P(3) = 3.7e-28
Identities = 48/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 630 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 688
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 689 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 748
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ KW + C S+ G+K L L +
Sbjct: 749 GIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSN 807
Score = 140 (54.3 bits), Expect = 3.7e-28, Sum P(3) = 3.7e-28
Identities = 50/224 (22%), Positives = 95/224 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G+E G+C+++ + Y +++ G G +P ++ VY D A
Sbjct: 432 EGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGMVGELVYGRADVA 491
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLA 601
V + I R ++ DF++P++ G+ +++ +K ++FL P +W ++
Sbjct: 492 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 551
Query: 602 VGAVVWILEHRL-----NDEF---RGPPKRQVVTIF------WFSFSTMFFAHKEKTVSA 647
V V++++ +EF R P F WFS + + +
Sbjct: 552 VSVVLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQQGCDISPRS 611
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 612 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 655
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 440 YCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGM--VGE-LVYGRADVAV-APL 495
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 496 TITLVREEVID 506
Score = 39 (18.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 305 DAKTPNGYIGLNAYG 319
D KT NG +G YG
Sbjct: 472 DTKTWNGMVGELVYG 486
>RGD|2736 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, N-methyl D-aspartate
1" species:10116 "Rattus norvegicus" [GO:0001661 "conditioned taste
aversion" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] [GO:0001967 "suckling behavior" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IDA;TAS]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP;IDA;TAS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO] [GO:0005262 "calcium channel activity"
evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISO] [GO:0006812
"cation transport" evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA;ISO] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA;ISO] [GO:0007611 "learning or memory" evidence=ISO;TAS]
[GO:0007612 "learning" evidence=ISO] [GO:0007613 "memory"
evidence=ISO] [GO:0007616 "long-term memory" evidence=IEA;ISO]
[GO:0008021 "synaptic vesicle" evidence=IEA;ISO] [GO:0008306
"associative learning" evidence=ISO] [GO:0008344 "adult locomotory
behavior" evidence=IEA;ISO] [GO:0008355 "olfactory learning"
evidence=IEA;ISO] [GO:0008542 "visual learning" evidence=IEA;ISO]
[GO:0009986 "cell surface" evidence=IEA;ISO] [GO:0010646 "regulation
of cell communication" evidence=ISO] [GO:0010942 "positive regulation
of cell death" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0014075 "response to amine stimulus" evidence=IEP]
[GO:0016020 "membrane" evidence=ISO] [GO:0016594 "glycine binding"
evidence=ISO;IDA] [GO:0016595 "glutamate binding" evidence=ISO;IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA;TAS] [GO:0018964 "propylene metabolic
process" evidence=IEA;ISO] [GO:0019233 "sensory perception of pain"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021586 "pons maturation" evidence=IEA;ISO] [GO:0021987 "cerebral
cortex development" evidence=IEA;ISO] [GO:0022843 "voltage-gated
cation channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032590
"dendrite membrane" evidence=IDA] [GO:0034220 "ion transmembrane
transport" evidence=ISO] [GO:0035176 "social behavior"
evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IDA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0035254 "glutamate
receptor binding" evidence=IPI] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IEA;ISO] [GO:0043523 "regulation of neuron apoptotic
process" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=ISO] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA;ISO]
[GO:0048511 "rhythmic process" evidence=IDA] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=IEA;ISO] [GO:0050770 "regulation
of axonogenesis" evidence=IEA;ISO] [GO:0050905 "neuromuscular
process" evidence=ISO] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051592 "response to calcium ion" evidence=IEP]
[GO:0051963 "regulation of synapse assembly" evidence=IEA;ISO]
[GO:0055074 "calcium ion homeostasis" evidence=ISO] [GO:0060076
"excitatory synapse" evidence=IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060134
"prepulse inhibition" evidence=IEA;ISO] [GO:0060179 "male mating
behavior" evidence=IEA;ISO] [GO:0060992 "response to fungicide"
evidence=IEP] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:2000463 "positive regulation of excitatory
postsynaptic membrane potential" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2736 GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288 GO:GO:0007611
GO:GO:0014070 GO:GO:0043083 GO:GO:0010942 GO:GO:0032590
InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076 GO:GO:0016595
GO:GO:2000463 GO:GO:0071287 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GeneTree:ENSGT00700000104113
GO:GO:0022843 GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562
PDB:2A5T PDBsum:2A5T CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638
OMA:VYRSAAM EMBL:X63255 EMBL:AY157515 EMBL:U08261 EMBL:U08262
EMBL:U08263 EMBL:U08264 EMBL:U08265 EMBL:U08267 EMBL:U08268
EMBL:S39217 EMBL:S39218 EMBL:S39219 EMBL:S39220 EMBL:S39221
EMBL:X65227 IPI:IPI00198625 IPI:IPI00231254 IPI:IPI00231255
IPI:IPI00231256 IPI:IPI00231257 IPI:IPI00231259 IPI:IPI00389747
PIR:JN0336 PIR:JN0337 PIR:JN0338 PIR:JN0339 PIR:JN0340 PIR:JN0341
PIR:JN0342 PIR:S19710 RefSeq:NP_001257531.1 RefSeq:NP_001257532.1
RefSeq:NP_001257534.1 RefSeq:NP_001257537.1 RefSeq:NP_001257539.1
RefSeq:NP_058706.1 UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9
PDB:1PBQ PDB:1Y1M PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8
PDBsum:1PB9 PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20
PDBsum:3Q41 ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N
IntAct:P35439 MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439
PRIDE:P35439 Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408 UCSC:RGD:2736
BindingDB:P35439 ChEMBL:CHEMBL330 EvolutionaryTrace:P35439
NextBio:603223 ArrayExpress:P35439 Genevestigator:P35439
GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 191 (72.3 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 505 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 564
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 565 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 624
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 625 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 683
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 684 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 742
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 743 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 801
Score = 184 (69.8 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 65/241 (26%), Positives = 106/241 (43%)
Query: 23 AQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSG 82
A+A+ P +VNIGA+LS + + + AV+ N G K++L H
Sbjct: 18 ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---GSWKIQLNATSVTHKP 69
Query: 83 F---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANELQVPLLSFSATDPTLS 134
+AL+ L+ Q AI+ P D T VS+ A ++P+L + S
Sbjct: 70 NAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYS 129
Query: 135 SLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRC 193
F+RT +Q + E++ Y W +I + DD GR L +TL +R
Sbjct: 130 DKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL-ETLLEERE 188
Query: 194 RISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVW 253
+ K L + +T LL++ E+R+I++ + V+ A L M G+GYVW
Sbjct: 189 SKAEKV-LQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVW 247
Query: 254 I 254
+
Sbjct: 248 L 248
Score = 96 (38.9 bits), Expect = 2.0e-15, Sum P(4) = 2.0e-15
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 457 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 516
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 517 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 576
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 577 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 614
Score = 73 (30.8 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + M+ G C + FT + +
Sbjct: 379 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-MSDGTCKEEFTVNGDPV 431
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 432 KKVICTGPNDTSPGSPRHTVPQC 454
Score = 52 (23.4 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 263 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 312
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 313 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 369
Query: 423 LSVV 426
V+
Sbjct: 370 THVI 373
Score = 43 (20.2 bits), Expect = 2.0e-15, Sum P(4) = 2.0e-15
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 696 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 745
>UNIPROTKB|P35439 [details] [associations]
symbol:Grin1 "Glutamate receptor ionotropic, NMDA 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2736
GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288
GO:GO:0007611 GO:GO:0014070 GO:GO:0043083 GO:GO:0010942
GO:GO:0032590 InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076
GO:GO:0016595 GO:GO:2000463 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0022843 GO:GO:0004972 KO:K05208
InterPro:IPR018882 Pfam:PF10562 PDB:2A5T PDBsum:2A5T CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:X63255
EMBL:AY157515 EMBL:U08261 EMBL:U08262 EMBL:U08263 EMBL:U08264
EMBL:U08265 EMBL:U08267 EMBL:U08268 EMBL:S39217 EMBL:S39218
EMBL:S39219 EMBL:S39220 EMBL:S39221 EMBL:X65227 IPI:IPI00198625
IPI:IPI00231254 IPI:IPI00231255 IPI:IPI00231256 IPI:IPI00231257
IPI:IPI00231259 IPI:IPI00389747 PIR:JN0336 PIR:JN0337 PIR:JN0338
PIR:JN0339 PIR:JN0340 PIR:JN0341 PIR:JN0342 PIR:S19710
RefSeq:NP_001257531.1 RefSeq:NP_001257532.1 RefSeq:NP_001257534.1
RefSeq:NP_001257537.1 RefSeq:NP_001257539.1 RefSeq:NP_058706.1
UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9 PDB:1PBQ PDB:1Y1M
PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8 PDBsum:1PB9
PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20 PDBsum:3Q41
ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N IntAct:P35439
MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439 PRIDE:P35439
Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408
UCSC:RGD:2736 BindingDB:P35439 ChEMBL:CHEMBL330
EvolutionaryTrace:P35439 NextBio:603223 ArrayExpress:P35439
Genevestigator:P35439 GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 191 (72.3 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 505 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 564
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 565 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 624
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 625 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 683
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 684 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 742
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 743 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 801
Score = 184 (69.8 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 65/241 (26%), Positives = 106/241 (43%)
Query: 23 AQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSG 82
A+A+ P +VNIGA+LS + + + AV+ N G K++L H
Sbjct: 18 ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---GSWKIQLNATSVTHKP 69
Query: 83 F---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANELQVPLLSFSATDPTLS 134
+AL+ L+ Q AI+ P D T VS+ A ++P+L + S
Sbjct: 70 NAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYS 129
Query: 135 SLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRC 193
F+RT +Q + E++ Y W +I + DD GR L +TL +R
Sbjct: 130 DKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL-ETLLEERE 188
Query: 194 RISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVW 253
+ K L + +T LL++ E+R+I++ + V+ A L M G+GYVW
Sbjct: 189 SKAEKV-LQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVW 247
Query: 254 I 254
+
Sbjct: 248 L 248
Score = 96 (38.9 bits), Expect = 2.0e-15, Sum P(4) = 2.0e-15
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 457 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 516
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 517 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 576
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 577 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 614
Score = 73 (30.8 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + M+ G C + FT + +
Sbjct: 379 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-MSDGTCKEEFTVNGDPV 431
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 432 KKVICTGPNDTSPGSPRHTVPQC 454
Score = 52 (23.4 bits), Expect = 3.7e-28, Sum P(4) = 3.7e-28
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 263 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 312
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 313 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 369
Query: 423 LSVV 426
V+
Sbjct: 370 THVI 373
Score = 43 (20.2 bits), Expect = 2.0e-15, Sum P(4) = 2.0e-15
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 696 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 745
>UNIPROTKB|F1NW92 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02028659 EMBL:AADN02028660 IPI:IPI00585053
Ensembl:ENSGALT00000006493 Uniprot:F1NW92
Length = 902
Score = 172 (65.6 bits), Expect = 4.5e-28, Sum P(3) = 4.5e-28
Identities = 73/297 (24%), Positives = 126/297 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ +++HY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 132 ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRVL 188
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
++ + R++VV R ++ L G GY +I + +D S
Sbjct: 189 FQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGFMDIDLTKFRESGA 248
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
++ G L YT D+V R + +WRN + P Y YD V ++A A
Sbjct: 249 --NVTG-FQLVNYT-DTVPAR-IMQQWRNNDARELPRVDWKRPKYTSALTYDGVRVMAEA 303
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+ +Q + S+ D + + + G ++ ++ Q G +G +FN
Sbjct: 304 FQNLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLSGNVQFNE 357
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQ-RLYSV 448
G N +I + G R+IGYW+ L V +T + N S+S Q R Y V
Sbjct: 358 KGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLVPVAIDT---QTGNESTSLQNRTYIV 411
Score = 143 (55.4 bits), Expect = 4.5e-28, Sum P(3) = 4.5e-28
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 628 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 686
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 687 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 746
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 747 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 140 (54.3 bits), Expect = 4.5e-28, Sum P(3) = 4.5e-28
Identities = 50/224 (22%), Positives = 95/224 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G+E G+C+++ + Y +++ G G +P ++ VY D A
Sbjct: 430 EGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGMVGELVYGRADVA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLA 601
V + I R ++ DF++P++ G+ +++ +K ++FL P +W ++
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 602 VGAVVWILEHRL-----NDEF---RGPPKRQVVTIF------WFSFSTMFFAHKEKTVSA 647
V V++++ +EF R P F WFS + + +
Sbjct: 550 VSVVLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 438 YCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGM--VGE-LVYGRADVAV-APL 493
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 494 TITLVREEVID 504
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 305 DAKTPNGYIGLNAYG 319
D KT NG +G YG
Sbjct: 470 DTKTWNGMVGELVYG 484
>MGI|MGI:95819 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, NMDA1 (zeta 1)"
species:10090 "Mus musculus" [GO:0001661 "conditioned taste
aversion" evidence=IMP] [GO:0001964 "startle response"
evidence=IMP] [GO:0001967 "suckling behavior" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IGI;IMP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0005102 "receptor binding" evidence=IPI] [GO:0005215
"transporter activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=IGI] [GO:0005262 "calcium channel activity"
evidence=IGI;IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812
"cation transport" evidence=ISO;IGI] [GO:0006816 "calcium ion
transport" evidence=IMP;IDA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0007612 "learning" evidence=IMP] [GO:0007613 "memory"
evidence=IMP] [GO:0007616 "long-term memory" evidence=IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008306
"associative learning" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0008542 "visual learning" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010646 "regulation of
cell communication" evidence=IMP] [GO:0010942 "positive regulation
of cell death" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IC;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO;IMP] [GO:0016595 "glutamate binding"
evidence=ISO] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISO;IPI] [GO:0018964 "propylene
metabolic process" evidence=IDA] [GO:0019233 "sensory perception of
pain" evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021586 "pons maturation" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0030426 "growth cone" evidence=NAS] [GO:0032590 "dendrite
membrane" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IDA] [GO:0035176 "social behavior" evidence=IMP]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IMP;IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043083 "synaptic cleft" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IMP] [GO:0043523 "regulation of neuron apoptotic process"
evidence=IGI;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IGI;IMP] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=IMP] [GO:0048168 "regulation of neuronal synaptic
plasticity" evidence=IMP] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048511 "rhythmic
process" evidence=ISO] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0050770 "regulation of
axonogenesis" evidence=IMP] [GO:0050905 "neuromuscular process"
evidence=IMP] [GO:0051262 "protein tetramerization" evidence=ISO]
[GO:0051963 "regulation of synapse assembly" evidence=IMP]
[GO:0055074 "calcium ion homeostasis" evidence=IDA] [GO:0060076
"excitatory synapse" evidence=ISO] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060134 "prepulse inhibition" evidence=IMP] [GO:0060179 "male
mating behavior" evidence=IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO;IGI;IDA] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95819 GO:GO:0021987 GO:GO:0008355 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0019233 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0045944
GO:GO:0008344 GO:GO:0001967 GO:GO:0008542 GO:GO:0007616
GO:GO:0005509 GO:GO:0060079 GO:GO:0001975 GO:GO:0043524
GO:GO:0060134 GO:GO:0035249 GO:GO:0030288 GO:GO:0030426
GO:GO:0043065 GO:GO:0005516 GO:GO:0050770 GO:GO:0048814
GO:GO:0007585 GO:GO:0006874 GO:GO:0001661 GO:GO:0051963
GO:GO:0035176 EMBL:AL732309 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GeneTree:ENSGT00700000104113 GO:GO:0060179
GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562 CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 GO:GO:0018964 EMBL:D10028
EMBL:BC039157 IPI:IPI00118385 IPI:IPI00608056 PIR:S21104
RefSeq:NP_001171127.1 RefSeq:NP_001171128.1 RefSeq:NP_032195.1
UniGene:Mm.278672 ProteinModelPortal:P35438 SMR:P35438
DIP:DIP-31577N IntAct:P35438 MINT:MINT-135802 STRING:P35438
PhosphoSite:P35438 PaxDb:P35438 PRIDE:P35438
Ensembl:ENSMUST00000028335 Ensembl:ENSMUST00000114312 GeneID:14810
KEGG:mmu:14810 UCSC:uc008iri.2 UCSC:uc008irk.2 BindingDB:P35438
ChEMBL:CHEMBL2895 NextBio:286995 Bgee:P35438 CleanEx:MM_GRIN1
Genevestigator:P35438 GermOnline:ENSMUSG00000026959 GO:GO:0021586
Uniprot:P35438
Length = 938
Score = 191 (72.3 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 505 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 564
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 565 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 624
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 625 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 683
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 684 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 742
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 743 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 801
Score = 183 (69.5 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 65/241 (26%), Positives = 106/241 (43%)
Query: 23 AQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSG 82
A+A+ P +VNIGA+LS + + + AV+ N G K++L H
Sbjct: 18 ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---GSWKIQLNATSVTHKP 69
Query: 83 F---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANELQVPLLSFSATDPTLS 134
+AL+ L+ Q AI+ P D T VS+ A ++P+L + S
Sbjct: 70 NAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYS 129
Query: 135 SLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRC 193
F+RT +Q + E++ Y W +I + DD GR L +TL +R
Sbjct: 130 DKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL-ETLLEERE 188
Query: 194 RISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVW 253
+ K L + +T LL++ E+R+I++ + V+ A L M G+GYVW
Sbjct: 189 SKAEKV-LQFDPGTKNVTALLMEARDLEARVIILSASEDDAATVYRAAAMLNMTGSGYVW 247
Query: 254 I 254
+
Sbjct: 248 L 248
Score = 95 (38.5 bits), Expect = 3.2e-15, Sum P(4) = 3.2e-15
Identities = 31/158 (19%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFC+D+ + + L+ FG NN + E ++ + +G D V
Sbjct: 457 GFCVDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 516
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 517 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 576
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 577 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 614
Score = 73 (30.8 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 25/83 (30%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + M+ G C + FT + +
Sbjct: 379 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-MSDGTCKEEFTVNGDPV 431
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 432 KKVICTGPNDTSPGSPRHTVPQC 454
Score = 52 (23.4 bits), Expect = 4.7e-28, Sum P(4) = 4.7e-28
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 263 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 312
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 313 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 369
Query: 423 LSVV 426
V+
Sbjct: 370 THVI 373
Score = 43 (20.2 bits), Expect = 3.2e-15, Sum P(4) = 3.2e-15
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 696 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 745
>UNIPROTKB|A2AVK2 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOVERGEN:HBG052638 UniGene:Hs.558334 HGNC:HGNC:4584 ChiTaRS:GRIN1
IPI:IPI00789973 SMR:A2AVK2 Ensembl:ENST00000350902 UCSC:uc004cli.1
Uniprot:A2AVK2
Length = 909
Score = 191 (72.3 bits), Expect = 6.3e-28, Sum P(4) = 6.3e-28
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 505 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 564
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 565 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 624
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 625 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 683
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 684 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 742
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 743 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 801
Score = 186 (70.5 bits), Expect = 6.3e-28, Sum P(4) = 6.3e-28
Identities = 68/256 (26%), Positives = 112/256 (43%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C + A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSV------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR 178
++P+L + S F+RT +Q + E++ Y W +I + DD GR
Sbjct: 115 RIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGR 174
Query: 179 NGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVF 238
L +TL +R + K L + +T LL++ E+R+I++ + V+
Sbjct: 175 AAQKRL-ETLLEERESKAEKV-LQFDPGTKNVTALLMEAKELEARVIILSASEDDAATVY 232
Query: 239 HVAQYLGMLGTGYVWI 254
A L M G+GYVW+
Sbjct: 233 RAAAMLNMTGSGYVWL 248
Score = 96 (38.9 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 457 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 516
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 517 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 576
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 577 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 614
Score = 70 (29.7 bits), Expect = 6.3e-28, Sum P(4) = 6.3e-28
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 379 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 431
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 432 KKVICTGPNDTSPGSPRHTVPQC 454
Score = 50 (22.7 bits), Expect = 6.3e-28, Sum P(4) = 6.3e-28
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 365 IFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGL 423
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 314 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNGT 370
Query: 424 SVV 426
V+
Sbjct: 371 HVI 373
Score = 43 (20.2 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 696 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 745
>UNIPROTKB|Q05586 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IMP;IDA] [GO:0016595 "glutamate binding" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0045471 "response to ethanol"
evidence=IDA] [GO:0006812 "cation transport" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042391 "regulation
of membrane potential" evidence=IDA] [GO:0005262 "calcium channel
activity" evidence=IDA] [GO:0005509 "calcium ion binding"
evidence=ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
[GO:0008021 "synaptic vesicle" evidence=ISS] [GO:0008542 "visual
learning" evidence=ISS] [GO:0014069 "postsynaptic density"
evidence=ISS] [GO:0043005 "neuron projection" evidence=ISS]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0055074 "calcium ion homeostasis" evidence=ISS]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0018964 "propylene
metabolic process" evidence=ISS] [GO:2000463 "positive regulation
of excitatory postsynaptic membrane potential" evidence=ISS]
[GO:0043083 "synaptic cleft" evidence=ISS] [GO:0042165
"neurotransmitter binding" evidence=ISS] [GO:0043195 "terminal
bouton" evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0060076 "excitatory synapse" evidence=ISS] [GO:0070588 "calcium
ion transmembrane transport" evidence=IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0045471 GO:GO:0030054 GO:GO:0045211
GO:GO:0008021 GO:GO:0045944 GO:GO:0035235 GO:GO:0008542
GO:GO:0005509 GO:GO:0043195 DrugBank:DB00142 GO:GO:0030288
GO:GO:0005516 GO:GO:0043083 EMBL:AL929554 InterPro:IPR001828
GO:GO:0070588 GO:GO:0055074 GO:GO:0060076 Orphanet:178469 PDB:3BYA
PDBsum:3BYA DrugBank:DB01173 GO:GO:0016595 GO:GO:2000463
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
eggNOG:NOG282132 GO:GO:0016594 KO:K05208 InterPro:IPR018882
Pfam:PF10562 TCDB:1.A.10.1.6 CTD:2902 HOVERGEN:HBG052638
OrthoDB:EOG4CG07J EMBL:L13266 EMBL:L13267 EMBL:L13268 EMBL:D13515
EMBL:L05666 EMBL:AF015730 EMBL:AF015731 EMBL:Z32772 EMBL:Z32773
EMBL:Z32774 EMBL:U08106 EMBL:U08107 EMBL:S57708 IPI:IPI00011989
IPI:IPI00013915 IPI:IPI00335571 IPI:IPI00465228 IPI:IPI00470730
IPI:IPI00470731 IPI:IPI00646891 PIR:A46612 PIR:A47551
RefSeq:NP_000823.4 RefSeq:NP_001172019.1 RefSeq:NP_001172020.1
RefSeq:NP_015566.1 RefSeq:NP_067544.1 UniGene:Hs.558334 PDB:2NR1
PDBsum:2NR1 ProteinModelPortal:Q05586 SMR:Q05586 IntAct:Q05586
MINT:MINT-1900224 STRING:Q05586 PhosphoSite:Q05586 DMDM:548377
PaxDb:Q05586 PRIDE:Q05586 Ensembl:ENST00000315048
Ensembl:ENST00000371546 Ensembl:ENST00000371550
Ensembl:ENST00000371553 Ensembl:ENST00000371559
Ensembl:ENST00000371560 Ensembl:ENST00000371561 GeneID:2902
KEGG:hsa:2902 UCSC:uc004clk.3 UCSC:uc004cll.3 UCSC:uc004clm.3
GeneCards:GC09P140032 HGNC:HGNC:4584 HPA:CAB006831 MIM:138249
MIM:614254 neXtProt:NX_Q05586 PharmGKB:PA28978 OMA:VYRSAAM
PhylomeDB:Q05586 BindingDB:Q05586 ChEMBL:CHEMBL2015 ChiTaRS:GRIN1
EvolutionaryTrace:Q05586 GenomeRNAi:2902 NextBio:11487
PMAP-CutDB:Q5VSF3 ArrayExpress:Q05586 Bgee:Q05586 CleanEx:HS_GRIN1
Genevestigator:Q05586 GermOnline:ENSG00000176884 GO:GO:0018964
Uniprot:Q05586
Length = 938
Score = 191 (72.3 bits), Expect = 7.5e-28, Sum P(4) = 7.5e-28
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 505 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 564
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 565 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 624
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 625 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 683
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 684 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 742
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 743 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 801
Score = 186 (70.5 bits), Expect = 7.5e-28, Sum P(4) = 7.5e-28
Identities = 68/256 (26%), Positives = 112/256 (43%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C + A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSV------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR 178
++P+L + S F+RT +Q + E++ Y W +I + DD GR
Sbjct: 115 RIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGR 174
Query: 179 NGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVF 238
L +TL +R + K L + +T LL++ E+R+I++ + V+
Sbjct: 175 AAQKRL-ETLLEERESKAEKV-LQFDPGTKNVTALLMEAKELEARVIILSASEDDAATVY 232
Query: 239 HVAQYLGMLGTGYVWI 254
A L M G+GYVW+
Sbjct: 233 RAAAMLNMTGSGYVWL 248
Score = 96 (38.9 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 457 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 516
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 517 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 576
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 577 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 614
Score = 70 (29.7 bits), Expect = 7.5e-28, Sum P(4) = 7.5e-28
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 379 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 431
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 432 KKVICTGPNDTSPGSPRHTVPQC 454
Score = 50 (22.7 bits), Expect = 7.5e-28, Sum P(4) = 7.5e-28
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 365 IFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGL 423
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 314 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNGT 370
Query: 424 SVV 426
V+
Sbjct: 371 HVI 373
Score = 43 (20.2 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 696 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 745
>UNIPROTKB|B7Z9G9 [details] [associations]
symbol:GRIA1 "cDNA, FLJ78833, highly similar to Glutamate
receptor 1" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
HOVERGEN:HBG051839 KO:K05197 EMBL:AK315934 IPI:IPI00978580
RefSeq:NP_001244951.1 SMR:B7Z9G9 STRING:B7Z9G9
Ensembl:ENST00000448073 UCSC:uc011dcy.2 Uniprot:B7Z9G9
Length = 916
Score = 165 (63.1 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 66/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 142 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 198
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 199 FQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGA 258
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 259 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 312
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 313 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 366
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWN 393
Score = 147 (56.8 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 48/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 638 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 696
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 697 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 756
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ KW + C S+ G+K L L +
Sbjct: 757 GIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSN 815
Score = 136 (52.9 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 440 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 499
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 500 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 559
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 560 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 619
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 620 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 663
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 448 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 503
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 504 TITLVREEVID 514
>UNIPROTKB|F1RYR0 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:VNGQWNG GeneTree:ENSGT00590000083056
EMBL:AEMK01188348 EMBL:CU062538 EMBL:CU407189 EMBL:CU457396
EMBL:CU928568 Ensembl:ENSSSCT00000004819 Uniprot:F1RYR0
Length = 872
Score = 165 (63.1 bits), Expect = 4.0e-27, Sum P(4) = 4.0e-27
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 418 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAV 477
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 478 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 537
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAH-KEKTVSALG- 649
V++++ E+ P P VV T+ FWF + E AL
Sbjct: 538 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQEGPELMPKALFL 597
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
R SSYTA+L + LTV+++ SPI D L
Sbjct: 598 RIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 638
Score = 136 (52.9 bits), Expect = 4.0e-27, Sum P(4) = 4.0e-27
Identities = 44/164 (26%), Positives = 68/164 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARNYLVDELNIDE-SRLVP 722
SSYTA+L + LTV+++ SPI D L I Y V A + I ++
Sbjct: 613 SSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATMTFFKKSKISTYDKMWA 671
Query: 723 LNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRCEFSIVGQVFTKNGWGF 776
S + +K +G + D A+ E C + +G + G+G
Sbjct: 672 FMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGV 730
Query: 777 AFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 731 GTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 774
Score = 122 (48.0 bits), Expect = 4.0e-27, Sum P(4) = 4.0e-27
Identities = 65/294 (22%), Positives = 122/294 (41%)
Query: 49 KLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAV 107
+LA + AV+ +N + T L T L Q N + F A +A + AI GP +
Sbjct: 17 ELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSS 76
Query: 108 TSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREV 167
+++ V + N L VP + + +S + ++V AI ++V + W+ V
Sbjct: 77 SANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTV 135
Query: 168 IAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIV 226
+Y DD G+ L + + A R + K T+D LL ++ + ++
Sbjct: 136 TVVY-DDS---TGLIRLQELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVI 190
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+ + A +GM+ Y +I T+ ALD S V ++ G L T
Sbjct: 191 FDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTE 248
Query: 287 TPD--SVLKRKFISRWRN--LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
S++++ + R + D+ +G++ +A YD V +++ + F
Sbjct: 249 NTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA--LMYDAVHVVSVGVQQF 300
Score = 67 (28.6 bits), Expect = 4.0e-27, Sum P(4) = 4.0e-27
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 319 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 377
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 378 -ESQKGKPANITDSLSNRSL 396
>UNIPROTKB|F1PDR1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03003077 Ensembl:ENSCAFT00000028234
Uniprot:F1PDR1
Length = 806
Score = 165 (63.1 bits), Expect = 4.3e-27, Sum P(3) = 4.3e-27
Identities = 66/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 188
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 189 FQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGA 248
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 249 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 302
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 303 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWN 383
Score = 143 (55.4 bits), Expect = 4.3e-27, Sum P(3) = 4.3e-27
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 628 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 686
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 687 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 746
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 747 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 136 (52.9 bits), Expect = 4.3e-27, Sum P(3) = 4.3e-27
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 430 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 550 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 44 (20.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 438 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 493
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 494 TITLVREEVID 504
>UNIPROTKB|F1PDP9 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2890 KO:K05197 OMA:ARIMQQW EMBL:AAEX03003077
RefSeq:XP_853398.1 ProteinModelPortal:F1PDP9
Ensembl:ENSCAFT00000028256 GeneID:489168 KEGG:cfa:489168
Uniprot:F1PDP9
Length = 906
Score = 165 (63.1 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 66/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 188
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 189 FQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGA 248
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 249 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 302
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 303 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWN 383
Score = 143 (55.4 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 628 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 686
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 687 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 746
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 747 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 136 (52.9 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 430 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 550 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 438 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 493
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 494 TITLVREEVID 504
>UNIPROTKB|P42261 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007616 "long-term memory" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030425 "dendrite"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0008066 "glutamate
receptor activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] [GO:0009986 "cell
surface" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0044309 "neuron spine" evidence=ISS] [GO:0030165
"PDZ domain binding" evidence=ISS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 GO:GO:0009986 EMBL:CH471062 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 DrugBank:DB00142 GO:GO:0030288
GO:GO:0032281 GO:GO:0031623 GO:GO:0030165 GO:GO:0032590
DrugBank:DB01159 InterPro:IPR001828 DrugBank:DB01189
DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028 DrugBank:DB01236
GO:GO:0030666 Pathway_Interaction_DB:ephbfwdpathway
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 EMBL:M64752 EMBL:X58633 EMBL:M81886
EMBL:AK295039 EMBL:AK295827 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 EMBL:BC111734 IPI:IPI00030880
IPI:IPI00219124 PIR:A40222 PIR:A41273 PIR:S25852 PIR:S38723
RefSeq:NP_000818.2 RefSeq:NP_001107655.1 RefSeq:NP_001244948.1
RefSeq:NP_001244950.1 RefSeq:NP_001244952.1 UniGene:Hs.519693
UniGene:Hs.737709 ProteinModelPortal:P42261 SMR:P42261
DIP:DIP-41487N MINT:MINT-271172 STRING:P42261 PhosphoSite:P42261
DMDM:116242505 PaxDb:P42261 PRIDE:P42261 Ensembl:ENST00000285900
Ensembl:ENST00000340592 Ensembl:ENST00000518142
Ensembl:ENST00000544403 Ensembl:ENST00000544794 GeneID:2890
KEGG:hsa:2890 UCSC:uc003luy.4 UCSC:uc003lva.4 CTD:2890
GeneCards:GC05P152850 H-InvDB:HIX0032120 HGNC:HGNC:4571
HPA:CAB001965 MIM:138248 neXtProt:NX_P42261 PharmGKB:PA28966
HOVERGEN:HBG051839 KO:K05197 OrthoDB:EOG479F6B PhylomeDB:P42261
BindingDB:P42261 ChEMBL:CHEMBL2009 GenomeRNAi:2890 NextBio:11425
ArrayExpress:P42261 Bgee:P42261 CleanEx:HS_GRIA1
Genevestigator:P42261 GermOnline:ENSG00000155511 GO:GO:0015277
Uniprot:P42261
Length = 906
Score = 165 (63.1 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 66/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 188
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 189 FQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGA 248
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 249 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 302
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 303 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWN 383
Score = 143 (55.4 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 628 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 686
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 687 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 746
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 747 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 136 (52.9 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 430 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 550 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 438 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 493
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 494 TITLVREEVID 504
>UNIPROTKB|Q38PU8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0014069
"postsynaptic density" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0043197 "dendritic
spine" evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0005789 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 EMBL:DQ159929 HSSP:P19491
ProteinModelPortal:Q38PU8 SMR:Q38PU8 Uniprot:Q38PU8
Length = 906
Score = 165 (63.1 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 66/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 188
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 189 FQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGA 248
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 249 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 302
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 303 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWN 383
Score = 143 (55.4 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 628 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 686
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 687 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 746
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 747 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 136 (52.9 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 430 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 550 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 438 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 493
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 494 TITLVREEVID 504
>UNIPROTKB|E7ESV8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
KO:K05197 OMA:ARIMQQW IPI:IPI00978580 ProteinModelPortal:E7ESV8
SMR:E7ESV8 Ensembl:ENST00000518783 UCSC:uc011dcz.2
ArrayExpress:E7ESV8 Bgee:E7ESV8 Uniprot:E7ESV8
Length = 916
Score = 165 (63.1 bits), Expect = 7.1e-27, Sum P(3) = 7.1e-27
Identities = 66/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 142 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 198
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 199 FQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGA 258
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 259 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 312
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 313 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 366
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 367 EKGRRTNYTLHVIEMKHDGIRKIGYWN 393
Score = 143 (55.4 bits), Expect = 7.1e-27, Sum P(3) = 7.1e-27
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 638 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 696
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 697 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 756
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 757 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 801
Score = 136 (52.9 bits), Expect = 7.1e-27, Sum P(3) = 7.1e-27
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 440 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 499
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 500 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 559
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 560 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 619
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 620 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 663
Score = 44 (20.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 448 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 503
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 504 TITLVREEVID 514
>UNIPROTKB|F1N3G8 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0009986
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 GO:GO:0030288 GO:GO:0032281
GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2890
KO:K05197 OMA:ARIMQQW EMBL:DAAA02020690 EMBL:DAAA02020691
EMBL:DAAA02020692 EMBL:DAAA02020693 EMBL:DAAA02020694
EMBL:DAAA02020695 EMBL:DAAA02020696 EMBL:DAAA02020697
EMBL:DAAA02020698 EMBL:DAAA02020699 EMBL:DAAA02020700
EMBL:DAAA02020701 EMBL:DAAA02020702 IPI:IPI01000809
RefSeq:XP_002704933.2 UniGene:Bt.110838 Ensembl:ENSBTAT00000007628
GeneID:529618 KEGG:bta:529618 Uniprot:F1N3G8
Length = 837
Score = 163 (62.4 bits), Expect = 8.2e-27, Sum P(3) = 8.2e-27
Identities = 65/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 119
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 120 FQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNKFKESGA 179
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 180 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 233
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A + +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 234 AFQNLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 287
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 288 EKGRRTNYTLHVIEMKHDGIRKIGYWN 314
Score = 143 (55.4 bits), Expect = 8.2e-27, Sum P(3) = 8.2e-27
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 559 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 617
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 618 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 677
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 678 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 722
Score = 136 (52.9 bits), Expect = 8.2e-27, Sum P(3) = 8.2e-27
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 361 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 420
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 421 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 480
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 481 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 540
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 541 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 584
Score = 44 (20.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 369 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 424
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 425 TITLVREEVID 435
>UNIPROTKB|G3V914 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 EMBL:CH473976 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V914 Ensembl:ENSRNOT00000039587 Uniprot:G3V914
Length = 883
Score = 155 (59.6 bits), Expect = 8.7e-27, Sum P(3) = 8.7e-27
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 8.7e-27, Sum P(3) = 8.7e-27
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 143 (55.4 bits), Expect = 8.7e-27, Sum P(3) = 8.7e-27
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 754 GIATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 812
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>MGI|MGI:95808 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA1 (alpha 1)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0001965 "G-protein alpha-subunit
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IGI] [GO:0007616 "long-term memory" evidence=ISO;IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008179 "adenylate
cyclase binding" evidence=ISO] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IDA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0009986 "cell surface" evidence=IDA]
[GO:0014069 "postsynaptic density" evidence=ISO;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0031267 "small GTPase binding" evidence=ISO]
[GO:0031489 "myosin V binding" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] [GO:0031623 "receptor
internalization" evidence=ISO;IMP] [GO:0031681 "G-protein
beta-subunit binding" evidence=ISO] [GO:0031698 "beta-2 adrenergic
receptor binding" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032590 "dendrite
membrane" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043197
"dendritic spine" evidence=ISO;IDA] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044309 "neuron spine" evidence=ISO;IDA] [GO:0045202 "synapse"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045838 "positive regulation of membrane potential"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=ISO] [GO:0050804 "regulation of synaptic transmission"
evidence=ISO] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISO] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0060076 "excitatory synapse" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95808 GO:GO:0014069
GO:GO:0009986 GO:GO:0005789 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0008021 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 HOGENOM:HOG000234372 CTD:2890 HOVERGEN:HBG051839
KO:K05197 EMBL:X57497 IPI:IPI00136965 PIR:S12874
RefSeq:NP_001106796.1 UniGene:Mm.4920 ProteinModelPortal:P23818
SMR:P23818 DIP:DIP-31970N IntAct:P23818 MINT:MINT-1897734
STRING:P23818 PhosphoSite:P23818 PaxDb:P23818 PRIDE:P23818
Ensembl:ENSMUST00000036315 GeneID:14799 KEGG:mmu:14799
UCSC:uc007izs.2 InParanoid:P23818 OMA:ARIMQQW BindingDB:P23818
ChEMBL:CHEMBL3502 ChiTaRS:GRIA1 NextBio:286953 Bgee:P23818
CleanEx:MM_GRIA1 Genevestigator:P23818
GermOnline:ENSMUSG00000020524 Uniprot:P23818
Length = 907
Score = 159 (61.0 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 66/267 (24%), Positives = 112/267 (41%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W+ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 132 ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEKNWQVT--AVNILTTTEEGYRML 188
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 189 FQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNKFKESGA 248
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ R + +WR +DA+ T + YD V ++A
Sbjct: 249 --NVTG-FQLVNYT-DTIPAR-IMQQWRT-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 302
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 303 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWN 383
Score = 147 (56.8 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 48/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 628 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 686
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 687 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 746
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ KW + C S+ G+K L L +
Sbjct: 747 GIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSN 805
Score = 136 (52.9 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 430 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 550 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 438 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 493
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 494 TITLVREEVID 504
>UNIPROTKB|F1PE26 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:HAVPYVS EMBL:AAEX03010079
Ensembl:ENSCAFT00000013743 Uniprot:F1PE26
Length = 842
Score = 153 (58.9 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 21 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 73
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 74 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 132
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 133 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 191
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 192 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF 245
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 246 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 299
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 300 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 335
Score = 145 (56.1 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 370 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 427
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 428 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 487
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 488 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 547
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 548 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 602
Score = 143 (55.4 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 569 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 627
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 628 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 687
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 688 GIATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 746
Score = 46 (21.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 379 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 437
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 438 LVREEVID 445
>UNIPROTKB|F1MK58 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00705733
ProteinModelPortal:F1MK58 Ensembl:ENSBTAT00000006271 Uniprot:F1MK58
Length = 883
Score = 153 (58.9 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 143 (55.4 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 754 GIATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 812
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>UNIPROTKB|A8MT92 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0032279
GO:GO:0042734 GO:GO:0043195 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HGNC:HGNC:4572 OrthoDB:EOG4TB49K EMBL:AC079233 EMBL:AC112240
IPI:IPI00789563 SMR:A8MT92 STRING:A8MT92 Ensembl:ENST00000393815
Ensembl:ENST00000449365 Ensembl:ENST00000507898 UCSC:uc011cit.2
Uniprot:A8MT92
Length = 836
Score = 152 (58.6 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 40 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 92
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 93 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYRSLFQD 151
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 152 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 210
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 211 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF 264
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 265 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 318
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 319 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 354
Score = 145 (56.1 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 389 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 446
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 447 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 506
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 507 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 566
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 567 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 621
Score = 143 (55.4 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 588 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 646
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 647 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 706
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 707 GIATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 765
Score = 46 (21.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 398 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 456
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 457 LVREEVID 464
>UNIPROTKB|F1LPK4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00948300
ProteinModelPortal:F1LPK4 Ensembl:ENSRNOT00000039491
ArrayExpress:F1LPK4 Uniprot:F1LPK4
Length = 920
Score = 155 (59.6 bits), Expect = 3.4e-26, Sum P(3) = 3.4e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 86 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 138
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 139 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 197
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 198 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 256
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 257 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF 310
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 311 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 364
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 365 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 400
Score = 145 (56.1 bits), Expect = 3.4e-26, Sum P(3) = 3.4e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 435 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 492
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 493 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 552
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 553 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 612
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 613 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 667
Score = 138 (53.6 bits), Expect = 3.4e-26, Sum P(3) = 3.4e-26
Identities = 48/178 (26%), Positives = 81/178 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 634 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 692
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 693 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 752
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG--AKLDVDRLQLK 829
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G +K V+ LK
Sbjct: 753 GIATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKTPVNLAVLK 810
Score = 64 (27.6 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 788 ISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
++ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 804 VNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 849
Score = 46 (21.3 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 444 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 502
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 503 LVREEVID 510
>MGI|MGI:95809 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA2 (alpha 2)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030672 "synaptic vesicle membrane" evidence=ISO]
[GO:0031623 "receptor internalization" evidence=ISO] [GO:0032279
"asymmetric synapse" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IDA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=ISO] [GO:0043198 "dendritic shaft" evidence=ISO]
[GO:0043204 "perikaryon" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045184 "establishment of protein
localization" evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051966
"regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95809 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0032281 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 OrthoDB:EOG4TB49K EMBL:X57498
EMBL:L32204 EMBL:L32189 EMBL:L32190 EMBL:L32192 EMBL:L32194
EMBL:L32196 EMBL:L32198 EMBL:L32200 EMBL:L32202 EMBL:L32203
EMBL:L32201 EMBL:L32199 EMBL:L32197 EMBL:L32195 EMBL:L32193
EMBL:L32191 EMBL:L32372 EMBL:AK014389 EMBL:AK043490 EMBL:AK044574
EMBL:AK046861 IPI:IPI00136967 IPI:IPI00466699 IPI:IPI00608015
IPI:IPI00845711 PIR:I49695 PIR:I49696 RefSeq:NP_001034284.1
RefSeq:NP_001077275.1 RefSeq:NP_038568.2 UniGene:Mm.220224
ProteinModelPortal:P23819 SMR:P23819 IntAct:P23819
MINT:MINT-1776844 STRING:P23819 PhosphoSite:P23819 PaxDb:P23819
PRIDE:P23819 GeneID:14800 KEGG:mmu:14800 UCSC:uc008pnz.1
UCSC:uc008pof.1 BindingDB:P23819 ChEMBL:CHEMBL3205 NextBio:286957
CleanEx:MM_GRIA2 Genevestigator:P23819
GermOnline:ENSMUSG00000033981 Uniprot:P23819
Length = 883
Score = 155 (59.6 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 137 (53.3 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 754 GIATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 46 (21.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>RGD|61862 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA 2"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA;TAS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;ISO] [GO:0005246 "calcium channel regulator activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=TAS] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IDA;IPI]
[GO:0030425 "dendrite" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030672 "synaptic vesicle membrane" evidence=IDA]
[GO:0031623 "receptor internalization" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=IDA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;ISS] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA;IPI]
[GO:0045184 "establishment of protein localization" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051966 "regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069
GO:GO:0051262 GO:GO:0005789 GO:GO:0060992 GO:GO:0010226
GO:GO:0007268 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0042734 GO:GO:0043195
GO:GO:0030672 GO:GO:0032281 GO:GO:0030426 GO:GO:0045184
GO:GO:0031623 GO:GO:0001919 GO:GO:0032839 GO:GO:0030165
InterPro:IPR001828 DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419
EMBL:M38061 EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 155 (59.6 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 137 (53.3 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 754 GIATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 46 (21.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>UNIPROTKB|P19491 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069 GO:GO:0051262
GO:GO:0005789 GO:GO:0060992 GO:GO:0010226 GO:GO:0007268
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0042734 GO:GO:0043195 GO:GO:0030672
GO:GO:0032281 GO:GO:0030426 GO:GO:0045184 GO:GO:0031623
GO:GO:0001919 GO:GO:0032839 GO:GO:0030165 InterPro:IPR001828
DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419 EMBL:M38061
EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 155 (59.6 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 137 (53.3 bits), Expect = 3.6e-26, Sum P(3) = 3.6e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 754 GIATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 46 (21.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>UNIPROTKB|F1LNE4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 IPI:IPI00952011 ProteinModelPortal:F1LNE4
Ensembl:ENSRNOT00000067113 ArrayExpress:F1LNE4 Uniprot:F1LNE4
Length = 756
Score = 153 (58.9 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 62/281 (22%), Positives = 117/281 (41%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEIT 211
A+ ++++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++
Sbjct: 8 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 66
Query: 212 DLLVKVALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPF 269
L + L + R +++ ++ +V V +G GY +I + T D F
Sbjct: 67 SLFQDLELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQF 125
Query: 270 PSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWL 328
+ Q V Y D L KFI RW L + + P + Y YD V +
Sbjct: 126 GGANVSGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQV 179
Query: 329 LARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPA 388
+ A + KQ + S+ D + + + G + ++ Q + G +G
Sbjct: 180 MTEAFRNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNI 233
Query: 389 RFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
+F+ +G IN I+ + G R+IGYWS + V E
Sbjct: 234 KFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 274
Score = 145 (56.1 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 309 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 366
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 367 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 426
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 427 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 486
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 487 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 541
Score = 136 (52.9 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 508 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 566
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 567 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 626
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 627 GIATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 671
Score = 46 (21.3 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 318 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 376
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 377 LVREEVID 384
>UNIPROTKB|G3V938 [details] [associations]
symbol:Gria2 "Glutamate receptor, ionotropic, AMPA2,
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
EMBL:CH473976 GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V938 Ensembl:ENSRNOT00000039610 Uniprot:G3V938
Length = 883
Score = 155 (59.6 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 136 (52.9 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 754 GIATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>RGD|621531 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA 1"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0001965 "G-protein
alpha-subunit binding" evidence=IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0007268
"synaptic transmission" evidence=ISO] [GO:0007616 "long-term
memory" evidence=ISO;IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008179 "adenylate cyclase binding" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISO;TAS] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010226
"response to lithium ion" evidence=IEP] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0016020 "membrane" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;ISS]
[GO:0031267 "small GTPase binding" evidence=IPI] [GO:0031489
"myosin V binding" evidence=IPI] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031623 "receptor internalization"
evidence=ISO;IDA] [GO:0031681 "G-protein beta-subunit binding"
evidence=IDA] [GO:0031698 "beta-2 adrenergic receptor binding"
evidence=IPI] [GO:0032279 "asymmetric synapse" evidence=IDA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISO;IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IEP]
[GO:0032590 "dendrite membrane" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=NAS]
[GO:0042220 "response to cocaine" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=TAS] [GO:0043005 "neuron
projection" evidence=ISO;IDA] [GO:0043025 "neuronal cell body"
evidence=ISO;IDA] [GO:0043197 "dendritic spine" evidence=ISO;IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0044309 "neuron spine"
evidence=ISO;IDA] [GO:0045202 "synapse" evidence=IDA;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045838
"positive regulation of membrane potential" evidence=IMP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0048167 "regulation of synaptic plasticity"
evidence=NAS;IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051018 "protein kinase A binding"
evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEP] [GO:0060076 "excitatory synapse" evidence=IDA]
[GO:0060992 "response to fungicide" evidence=IEP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEP]
[GO:0071359 "cellular response to dsRNA" evidence=IEP] [GO:0071363
"cellular response to growth factor stimulus" evidence=IEP]
[GO:0071375 "cellular response to peptide hormone stimulus"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] [GO:0071418 "cellular response to amine
stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531
GO:GO:0005829 GO:GO:0048167 GO:GO:0042803 GO:GO:0014069
GO:GO:0071363 GO:GO:0005789 GO:GO:0046685 GO:GO:0042493
GO:GO:0032355 GO:GO:0060992 GO:GO:0010226 GO:GO:0042220
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0051602 GO:GO:0031594 GO:GO:0007616 GO:GO:0032279
GO:GO:0035249 GO:GO:0030288 GO:GO:0032281 GO:GO:0031623
GO:GO:0001919 GO:GO:0019228 GO:GO:0008179 GO:GO:0051018
GO:GO:0021510 GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828
GO:GO:0071375 GO:GO:0060076 GO:GO:0071418 GO:GO:0071230
GO:GO:0050806 PDB:2AWW PDBsum:2AWW GO:GO:0031681 GO:GO:0004971
GO:GO:0005234 CTD:2890 HOVERGEN:HBG051839 KO:K05197 EMBL:X17184
EMBL:M36418 EMBL:M38060 IPI:IPI00231012 IPI:IPI00324555 PIR:A40170
PIR:S07059 RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 156 (60.0 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 65/267 (24%), Positives = 112/267 (41%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W+ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 132 ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEKNWQVT--AVNILTTTEEGYRML 188
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 189 FQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNKFKESGA 248
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ R + +WR +D++ T + YD V ++A
Sbjct: 249 --NVTG-FQLVNYT-DTIPAR-IMQQWRT-SDSRDHTRVDWKRPKYTSALTYDGVKVMAE 302
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 303 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWN 383
Score = 143 (55.4 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 628 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 686
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 687 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 746
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 747 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 136 (52.9 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 430 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 550 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 438 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 493
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 494 TITLVREEVID 504
>UNIPROTKB|P19490 [details] [associations]
symbol:Gria1 "Glutamate receptor 1" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531 GO:GO:0005829
GO:GO:0048167 GO:GO:0042803 GO:GO:0014069 GO:GO:0071363
GO:GO:0005789 GO:GO:0046685 GO:GO:0042493 GO:GO:0032355
GO:GO:0060992 GO:GO:0010226 GO:GO:0042220 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051602
GO:GO:0031594 GO:GO:0007616 GO:GO:0032279 GO:GO:0035249
GO:GO:0030288 GO:GO:0032281 GO:GO:0031623 GO:GO:0001919
GO:GO:0019228 GO:GO:0008179 GO:GO:0051018 GO:GO:0021510
GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828 GO:GO:0071375
GO:GO:0060076 GO:GO:0071418 GO:GO:0071230 GO:GO:0050806 PDB:2AWW
PDBsum:2AWW GO:GO:0031681 GO:GO:0004971 GO:GO:0005234 CTD:2890
HOVERGEN:HBG051839 KO:K05197 EMBL:X17184 EMBL:M36418 EMBL:M38060
IPI:IPI00231012 IPI:IPI00324555 PIR:A40170 PIR:S07059
RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 156 (60.0 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 65/267 (24%), Positives = 112/267 (41%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W+ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 132 ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEKNWQVT--AVNILTTTEEGYRML 188
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 189 FQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNKFKESGA 248
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ R + +WR +D++ T + YD V ++A
Sbjct: 249 --NVTG-FQLVNYT-DTIPAR-IMQQWRT-SDSRDHTRVDWKRPKYTSALTYDGVKVMAE 302
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 303 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 356
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWN 383
Score = 143 (55.4 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 628 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 686
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 687 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 746
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 747 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 136 (52.9 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 49/224 (21%), Positives = 94/224 (41%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 430 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 594 VTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFSTMFFAHKEKTVSA 647
V+ + FL W E D+ + + WFS + + +
Sbjct: 550 VSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 438 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 493
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 494 TITLVREEVID 504
>UNIPROTKB|I3LHM1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:CU915394 EMBL:FP325266 Ensembl:ENSSSCT00000022356
Uniprot:I3LHM1
Length = 854
Score = 153 (58.9 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 40 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 92
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 93 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 151
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 152 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 210
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 211 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF 264
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 265 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 318
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 319 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 354
Score = 145 (56.1 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 389 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 446
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 447 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 506
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 507 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 566
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 567 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 621
Score = 136 (52.9 bits), Expect = 6.7e-26, Sum P(3) = 6.7e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 588 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 646
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 647 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 706
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 707 GIATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 751
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 398 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 456
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 457 LVREEVID 464
>UNIPROTKB|F1MBY1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00908138
Ensembl:ENSBTAT00000056038 Uniprot:F1MBY1
Length = 883
Score = 153 (58.9 bits), Expect = 7.6e-26, Sum P(3) = 7.6e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 7.6e-26, Sum P(3) = 7.6e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 136 (52.9 bits), Expect = 7.6e-26, Sum P(3) = 7.6e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 754 GIATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>UNIPROTKB|Q38PU7 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
EMBL:DQ159930 ProteinModelPortal:Q38PU7 SMR:Q38PU7 Uniprot:Q38PU7
Length = 883
Score = 152 (58.6 bits), Expect = 7.7e-26, Sum P(3) = 7.7e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 7.7e-26, Sum P(3) = 7.7e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 137 (53.3 bits), Expect = 7.7e-26, Sum P(3) = 7.7e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 754 GIATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 46 (21.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>UNIPROTKB|P42262 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0007165
"signal transduction" evidence=TAS] [GO:0008066 "glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0005789
GO:GO:0060992 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0042734
GO:GO:0043195 DrugBank:DB00142 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:L20814 EMBL:BC010574
IPI:IPI00030882 IPI:IPI00219216 IPI:IPI00871510 PIR:I58181
RefSeq:NP_000817.2 RefSeq:NP_001077088.1 RefSeq:NP_001077089.1
UniGene:Hs.32763 PDB:2WJW PDB:2WJX PDB:2XHD PDB:3R7X PDB:3RN8
PDB:3RNN PDB:3UA8 PDBsum:2WJW PDBsum:2WJX PDBsum:2XHD PDBsum:3R7X
PDBsum:3RN8 PDBsum:3RNN PDBsum:3UA8 ProteinModelPortal:P42262
SMR:P42262 DIP:DIP-42852N IntAct:P42262 MINT:MINT-2791741
STRING:P42262 PhosphoSite:P42262 DMDM:23831146 PaxDb:P42262
PRIDE:P42262 Ensembl:ENST00000264426 Ensembl:ENST00000296526
GeneID:2891 KEGG:hsa:2891 UCSC:uc003ipm.4 CTD:2891
GeneCards:GC04P158141 HGNC:HGNC:4572 HPA:CAB006830 HPA:CAB007812
HPA:CAB012981 HPA:HPA008441 MIM:138247 neXtProt:NX_P42262
PharmGKB:PA28967 KO:K05198 OMA:HAVPYVS OrthoDB:EOG4TB49K
BindingDB:P42262 ChEMBL:CHEMBL4016 EvolutionaryTrace:P42262
GenomeRNAi:2891 NextBio:11429 ArrayExpress:P42262 Bgee:P42262
CleanEx:HS_GRIA2 Genevestigator:P42262 GermOnline:ENSG00000120251
Uniprot:P42262
Length = 883
Score = 152 (58.6 bits), Expect = 9.7e-26, Sum P(3) = 9.7e-26
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 145 (56.1 bits), Expect = 9.7e-26, Sum P(3) = 9.7e-26
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 136 (52.9 bits), Expect = 9.7e-26, Sum P(3) = 9.7e-26
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 754 GIATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 46 (21.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>UNIPROTKB|E1C2Q1 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AADN02041869 EMBL:AADN02041870
IPI:IPI00596764 ProteinModelPortal:E1C2Q1
Ensembl:ENSGALT00000010723 Uniprot:E1C2Q1
Length = 869
Score = 182 (69.1 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 61/224 (27%), Positives = 105/224 (46%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG-----HNNPSCTELVRLITAGVYD 540
++G++ GFC+D+ +L + YK+ GDG N + T +V + A D
Sbjct: 423 LEGNDRYEGFCVDMLKELAEILRFN--YKIHLVGDGVYGVPEANGTWTGMVGELIARKAD 480
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIFF 599
AV + I R K+ DF++P++ G+ ++ V ++FL PF+P +W + +
Sbjct: 481 LAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAY 540
Query: 600 LAVGAVVWILEHRLNDEFRGP-PKRQ-----VVTIFWFSFSTMF----FAHKEKTVS--A 647
LAV V++++ E+ P P Q ++ + S F F + T++ A
Sbjct: 541 LAVSCVLFLVARLTPYEWYSPHPCSQGRCNLLINQYSLGNSLWFPVGGFMQQGSTIAPQA 600
Query: 648 LG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L R SSYTA+L + LTVQ++ PI+ +D L
Sbjct: 601 LSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 644
Score = 126 (49.4 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 56/234 (23%), Positives = 97/234 (41%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ ++ I+VH + + + A LGM Y +I
Sbjct: 171 KDTLSVRMLDDSRDPTPLLKEIRDDKTATIIVHANASMSHTILQKAAELGMASAYYTYIF 230
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L +L S +DD +L + ++F+ W+ D P
Sbjct: 231 TN-LEFSLQR---LDSQ-LDDRVNILGFSIFNQSHAFFQEFVQSLNQSWQENCD-HAP-- 282
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
+ G +D V+ + A+ L+ S++ + L S +I+ G
Sbjct: 283 FTGPALSSALLFDAVYAVVSAVQE-------LNRSQEIGVKP----LSCGSAQIWQHGTS 331
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
L + + + G G FNS G N A +I+ +G+R+IG+W GLS+
Sbjct: 332 LMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQHTHSGFRQIGHWHVSEGLSM 385
Score = 122 (48.0 bits), Expect = 1.3e-25, Sum P(3) = 1.3e-25
Identities = 38/159 (23%), Positives = 66/159 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ PI+ +D L + G + + + R+
Sbjct: 619 SSYTANLAAFLTVQRMDVPIESVDDLADQTTIEYGTIHGGSSMTFFQNSRYQTYQRMWNY 678
Query: 721 VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAF 778
+ P + K+ ++G + A + + E + C + VG + G+G
Sbjct: 679 MYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQVGGLLDTKGYGIGM 738
Query: 779 PRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
P S + AIL+L EN L+ + KW C +
Sbjct: 739 PVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE 777
Score = 120 (47.3 bits), Expect = 5.5e-25, Sum P(3) = 5.5e-25
Identities = 54/240 (22%), Positives = 100/240 (41%)
Query: 24 QASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGF 83
+ + P + I A+L + +L+I A + +N P LG K+++ + +
Sbjct: 2 RTAASPHALRIAAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSE 61
Query: 84 LALAEAL-HLMEGQTVAIIGPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
AE + ++ V ++GP + +S ++S++ E +VP F LQ F
Sbjct: 62 YETAETMCQILPKGVVGVLGPSSSPASSSIISNICGEKEVP--HFRVAPEEFLKLQLQRF 119
Query: 142 VRTT--QSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
S+ A+A I++ + I + N L L ++ IS K
Sbjct: 120 TTLNLHPSNTDISVAVAGILNFFNCTTACLICAKAECLLN----LEKLL--RQFLIS-KD 172
Query: 200 PLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATS 257
LSV +D + T LL ++ ++ I+VH + + + A LGM Y +I T+
Sbjct: 173 TLSVRMLDDSRDPTPLLKEIRDDKTATIIVHANASMSHTILQKAAELGMASAYYTYIFTN 232
>UNIPROTKB|Q5R4M0 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9601 "Pongo
abelii" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 EMBL:CR861226
UniGene:Pab.364 ProteinModelPortal:Q5R4M0 SMR:Q5R4M0 PRIDE:Q5R4M0
InParanoid:Q5R4M0 Uniprot:Q5R4M0
Length = 883
Score = 144 (55.7 bits), Expect = 2.8e-25, Sum P(3) = 2.8e-25
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 754 GIATPKGSSLGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 812
Score = 143 (55.4 bits), Expect = 2.8e-25, Sum P(3) = 2.8e-25
Identities = 72/336 (21%), Positives = 138/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 199 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y Y V ++ A
Sbjct: 258 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYYAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 366 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 401
Score = 142 (55.0 bits), Expect = 2.8e-25, Sum P(3) = 2.8e-25
Identities = 55/236 (23%), Positives = 99/236 (41%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 436 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIAGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLYPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q + WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 445 YCVDLAAEIAKHCGFKYKLTIAGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 503
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 504 LVREEVID 511
>UNIPROTKB|Q5R1P0 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 InterPro:IPR018882
Pfam:PF10562 EMBL:AB195993 EMBL:AB195994 EMBL:AB195995
RefSeq:NP_001008717.1 UniGene:Cfa.16224 ProteinModelPortal:Q5R1P0
SMR:Q5R1P0 STRING:Q5R1P0 PRIDE:Q5R1P0 GeneID:494007 KEGG:cfa:494007
CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638 OrthoDB:EOG4CG07J
NextBio:20865536 Uniprot:Q5R1P0
Length = 943
Score = 191 (72.3 bits), Expect = 3.6e-25, Sum P(5) = 3.6e-25
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 526 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 585
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 586 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 645
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 646 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 704
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 705 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 763
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 764 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 822
Score = 118 (46.6 bits), Expect = 3.6e-25, Sum P(5) = 3.6e-25
Identities = 51/194 (26%), Positives = 81/194 (41%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSF------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR 178
++P+L + S F+RT +Q + E++ Y W +I + DD GR
Sbjct: 115 RIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGR 174
Query: 179 NGIAALGDTLAAKR 192
L +TL +R
Sbjct: 175 AAQKRL-ETLLEER 187
Score = 96 (38.9 bits), Expect = 1.8e-12, Sum P(5) = 1.8e-12
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 478 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 537
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 538 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 597
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 598 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 635
Score = 81 (33.6 bits), Expect = 3.6e-25, Sum P(5) = 3.6e-25
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 225 VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 269
Score = 70 (29.7 bits), Expect = 3.6e-25, Sum P(5) = 3.6e-25
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 400 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 452
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 453 KKVICTGPNDTSPGSPRHTVPQC 475
Score = 52 (23.4 bits), Expect = 3.6e-25, Sum P(5) = 3.6e-25
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 284 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 333
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 334 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 390
Query: 423 LSVV 426
V+
Sbjct: 391 THVI 394
Score = 43 (20.2 bits), Expect = 1.8e-12, Sum P(5) = 1.8e-12
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 717 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 766
>UNIPROTKB|Q5VSF9 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOGENOM:HOG000231491 HOVERGEN:HBG052638 UniGene:Hs.558334
HGNC:HGNC:4584 ChiTaRS:GRIN1 IPI:IPI00647309 SMR:Q5VSF9
STRING:Q5VSF9 Ensembl:ENST00000371555 Uniprot:Q5VSF9
Length = 922
Score = 191 (72.3 bits), Expect = 3.9e-25, Sum P(5) = 3.9e-25
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 526 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 585
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 586 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 645
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 646 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 704
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 705 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 763
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 764 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 822
Score = 119 (46.9 bits), Expect = 3.9e-25, Sum P(5) = 3.9e-25
Identities = 51/194 (26%), Positives = 82/194 (42%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C + A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSV------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR 178
++P+L + S F+RT +Q + E++ Y W +I + DD GR
Sbjct: 115 RIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGR 174
Query: 179 NGIAALGDTLAAKR 192
L +TL +R
Sbjct: 175 AAQKRL-ETLLEER 187
Score = 96 (38.9 bits), Expect = 1.9e-12, Sum P(5) = 1.9e-12
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 478 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 537
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 538 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 597
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 598 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 635
Score = 81 (33.6 bits), Expect = 3.9e-25, Sum P(5) = 3.9e-25
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 225 VTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 269
Score = 70 (29.7 bits), Expect = 3.9e-25, Sum P(5) = 3.9e-25
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 400 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 452
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 453 KKVICTGPNDTSPGSPRHTVPQC 475
Score = 50 (22.7 bits), Expect = 3.9e-25, Sum P(5) = 3.9e-25
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 365 IFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGL 423
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 335 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNGT 391
Query: 424 SVV 426
V+
Sbjct: 392 HVI 394
Score = 43 (20.2 bits), Expect = 1.9e-12, Sum P(5) = 1.9e-12
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 717 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 766
>UNIPROTKB|F1NKF1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00603883
ProteinModelPortal:F1NKF1 Ensembl:ENSGALT00000038841
ArrayExpress:F1NKF1 Uniprot:F1NKF1
Length = 883
Score = 145 (56.1 bits), Expect = 4.4e-25, Sum P(3) = 4.4e-25
Identities = 55/236 (23%), Positives = 100/236 (42%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G++ G+C+D+ T + YKL GDG + +V + G
Sbjct: 436 LEGNDRYEGYCVDLATEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 494 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 553
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQV------VTIF---WFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q IF WFS + +
Sbjct: 554 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGAFMQQGCDIS 613
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 614 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 668
Score = 143 (55.4 bits), Expect = 4.4e-25, Sum P(3) = 4.4e-25
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 693
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 694 YMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 753
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 754 GIATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 812
Score = 139 (54.0 bits), Expect = 4.4e-25, Sum P(3) = 4.4e-25
Identities = 70/335 (20%), Positives = 140/335 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 87 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 139
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++ W++ I ++ G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 140 IEYSSWQKYAKI-LNTSLGLSTLQAVLDSAAEKKWQVTAINVGNINNDRKDETYRSLFQD 198
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNS-PFPSDVM 274
+ + + R +++ ++ +V V +G GY +I + T D + F +
Sbjct: 199 LEVKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLSKIQFGGANV 257
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 258 SGFQIV----DY--DDPLVSKFIQRWSTLEEKEYPGAHTSTIKYTSALTYDAVQVMTEAF 311
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G G +F+ +
Sbjct: 312 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGHGVEIERALKQVQVEGLTGNIKFDQN 365
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRP 428
G IN ++ + TG R+IGYWS + VV P
Sbjct: 366 GKRINFTINVMELKSTGPRKIGYWSEVDKM-VVNP 399
Score = 44 (20.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 102 GPQD-AVTSHVVSHVANELQVPLLSFSA--TDPTL---SSLQFPYFVRTTQ------SDQ 149
GP+ S V V N L PL + S+ + T+ + L+ PY + +D+
Sbjct: 382 GPRKIGYWSEVDKMVVNPLDGPLGNESSGLENKTIIVTTILESPYVMMKKNHEMLEGNDR 441
Query: 150 YQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPL 201
Y+ + EI H G++ + I D +G R+ + + + + + I+ APL
Sbjct: 442 YEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APL 500
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 501 TITLVREEVID 511
>UNIPROTKB|F1PHA8 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2900 KO:K05204 OMA:NRAPERL EMBL:AAEX03003415
EMBL:AAEX03003416 EMBL:AAEX03003417 EMBL:AAEX03003418
EMBL:AAEX03003419 RefSeq:XP_853030.3 Ensembl:ENSCAFT00000018877
GeneID:610429 KEGG:cfa:610429 Uniprot:F1PHA8
Length = 956
Score = 183 (69.5 bits), Expect = 6.2e-25, Sum P(3) = 6.2e-25
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG-----HNNPSCTELVRLITAGVYD 540
++G++ GFC+D+ +L + YK+ GDG N + T +V + A D
Sbjct: 438 MEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKAD 495
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIFF 599
AV + I R K+ DF++P++ G+ ++ V ++FL PF+P +W + +
Sbjct: 496 LAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAY 555
Query: 600 LAVGAVVWILEHRLNDEFRGP-PKRQ-----VVTIFWFSFSTMF----FAHKEKTVS--A 647
LAV V++++ E+ P P Q +V + S F F + T++ A
Sbjct: 556 LAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRA 615
Query: 648 LG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L R SSYTA+L + LTVQ++ PI+ +D L
Sbjct: 616 LSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 659
Score = 122 (48.0 bits), Expect = 6.2e-25, Sum P(3) = 6.2e-25
Identities = 54/235 (22%), Positives = 100/235 (42%)
Query: 29 PSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAE 88
P + I A+L + +L+I A + +N P LG K+++ + + AE
Sbjct: 22 PHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSEYETAE 81
Query: 89 AL-HLMEGQTVAIIGPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTT- 145
+ ++ VA++GP + +S ++S++ E +VP F QF F
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVP--HFKVAPEEFIKFQFQRFTTLNL 139
Query: 146 -QSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVE 204
S+ A+A I++ + I + N L L ++ IS K LSV
Sbjct: 140 HPSNTDISVAVAGILNFFNCTTACLICAKAECLLN----LEKLL--RQFLIS-KDTLSVR 192
Query: 205 ATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATS 257
+D + T LL ++ ++ I++H + + + A LGM+ Y +I T+
Sbjct: 193 MLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN 247
Score = 121 (47.7 bits), Expect = 7.9e-25, Sum P(3) = 7.9e-25
Identities = 58/254 (22%), Positives = 102/254 (40%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ ++ I++H + + + A LGM+ Y +I
Sbjct: 186 KDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIF 245
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L+ + ++DD +L + ++F W+ D P
Sbjct: 246 TN-----LEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFAQSLNQSWQENCD-HVP-- 297
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
+ G +D V+ + A+ L+ S++ + L S +I+ G
Sbjct: 298 FTGPALSSALLFDAVYAVVTAVQE-------LNRSQEIGVKP----LSCGSAQIWQHGTS 346
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + + G G FNS G N A +I+ G+R+IG W GLS+ L
Sbjct: 347 LMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRNGFRQIGQWHVADGLSM--DSRL 404
Query: 432 YSKPPNRSSSNQRL 445
Y+ + S N L
Sbjct: 405 YASNISDSLFNTTL 418
Score = 120 (47.3 bits), Expect = 6.2e-25, Sum P(3) = 6.2e-25
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYLVDELNIDESRL-- 720
SSYTA+L + LTVQ++ PI+ +D L I Y + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMDVPIESVDDLADQT-AIEYGTIHGGSSMTFFQNSRYQTYQRMWN 692
Query: 721 -VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
+ P + K+ ++G + A + + E + C + +G + G+G
Sbjct: 693 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIG 752
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
P S + AIL+L EN L+ + KW C +
Sbjct: 753 MPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE 792
>UNIPROTKB|Q16099 [details] [associations]
symbol:GRIK4 "Glutamate receptor ionotropic, kainate 4"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005634 GO:GO:0005887 EMBL:CH471065 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0043204
GO:GO:0042734 GO:GO:0043195 DrugBank:DB00142 InterPro:IPR001828
GO:GO:0031960 eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:S67803
EMBL:AK292726 IPI:IPI00292269 PIR:JH0826 RefSeq:NP_055434.2
UniGene:Hs.568901 ProteinModelPortal:Q16099 SMR:Q16099
STRING:Q16099 TCDB:1.A.10.1.9 PhosphoSite:Q16099 DMDM:209572625
PaxDb:Q16099 PRIDE:Q16099 Ensembl:ENST00000438375
Ensembl:ENST00000527524 GeneID:2900 KEGG:hsa:2900 UCSC:uc001pxn.2
CTD:2900 GeneCards:GC11P120480 H-InvDB:HIX0036043 HGNC:HGNC:4582
MIM:600282 neXtProt:NX_Q16099 PharmGKB:PA28976 InParanoid:Q16099
KO:K05204 OMA:NRAPERL PhylomeDB:Q16099 BindingDB:Q16099
ChEMBL:CHEMBL2829 GenomeRNAi:2900 NextBio:11479 Bgee:Q16099
CleanEx:HS_GRIK4 Genevestigator:Q16099 GermOnline:ENSG00000149403
Uniprot:Q16099
Length = 956
Score = 183 (69.5 bits), Expect = 6.2e-25, Sum P(3) = 6.2e-25
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG-----HNNPSCTELVRLITAGVYD 540
++G++ GFC+D+ +L + YK+ GDG N + T +V + A D
Sbjct: 438 MEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKAD 495
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIFF 599
AV + I R K+ DF++P++ G+ ++ V ++FL PF+P +W + +
Sbjct: 496 LAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAY 555
Query: 600 LAVGAVVWILEHRLNDEFRGP-PKRQ-----VVTIFWFSFSTMF----FAHKEKTVS--A 647
LAV V++++ E+ P P Q +V + S F F + T++ A
Sbjct: 556 LAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRA 615
Query: 648 LG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L R SSYTA+L + LTVQ++ PI+ +D L
Sbjct: 616 LSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 659
Score = 122 (48.0 bits), Expect = 6.2e-25, Sum P(3) = 6.2e-25
Identities = 54/235 (22%), Positives = 100/235 (42%)
Query: 29 PSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAE 88
P + I A+L + +L+I A + +N P LG K+++ + + AE
Sbjct: 22 PHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSEYETAE 81
Query: 89 AL-HLMEGQTVAIIGPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTT- 145
+ ++ VA++GP + +S ++S++ E +VP F QF F
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVP--HFKVAPEEFVKFQFQRFTTLNL 139
Query: 146 -QSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVE 204
S+ A+A I++ + I + N L L ++ IS K LSV
Sbjct: 140 HPSNTDISVAVAGILNFFNCTTACLICAKAECLLN----LEKLL--RQFLIS-KDTLSVR 192
Query: 205 ATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATS 257
+D + T LL ++ ++ I++H + + + A LGM+ Y +I T+
Sbjct: 193 MLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN 247
Score = 120 (47.3 bits), Expect = 6.2e-25, Sum P(3) = 6.2e-25
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYLVDELNIDESRL-- 720
SSYTA+L + LTVQ++ PI+ +D L I Y + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMDVPIESVDDLADQT-AIEYGTIHGGSSMTFFQNSRYQTYQRMWN 692
Query: 721 -VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
+ P + K+ ++G + A + + E + C + +G + G+G
Sbjct: 693 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIG 752
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
P S + AIL+L EN L+ + KW C +
Sbjct: 753 MPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE 792
Score = 120 (47.3 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 53/234 (22%), Positives = 95/234 (40%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ ++ I++H + + + A LGM+ Y +I
Sbjct: 186 KDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIF 245
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L+ + ++DD +L + ++F W+ D P
Sbjct: 246 TN-----LEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFAQSLNQSWQENCD-HVP-- 297
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
+ G +D V+ + A+ L+ S++ + L S +I+ G
Sbjct: 298 FTGPALSSALLFDAVYAVVTAVQE-------LNRSQEIGVKP----LSCGSAQIWQHGTS 346
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
L + + + G G FNS G N A +I+ G+R+IG W GLS+
Sbjct: 347 LMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSM 400
>UNIPROTKB|F1S9S0 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AEMK01179282 EMBL:CU638667
EMBL:CU972359 EMBL:FP236137 Ensembl:ENSSSCT00000016497
Uniprot:F1S9S0
Length = 932
Score = 182 (69.1 bits), Expect = 7.6e-25, Sum P(4) = 7.6e-25
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG-----HNNPSCTELVRLITAGVYD 540
++G++ GFC+D+ +L + YK+ GDG N + T +V + A D
Sbjct: 414 MEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKAD 471
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIFF 599
AV + I R K+ DF++P++ G+ ++ V ++FL PF+P +W + +
Sbjct: 472 LAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLAY 531
Query: 600 LAVGAVVWILEHRLNDEFRGP-PKRQ-----VVTIFWFSFSTMF----FAHKEKTVS--A 647
LAV V++++ E+ P P Q +V + S F F + T++ A
Sbjct: 532 LAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRA 591
Query: 648 LG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L R SSYTA+L + LTVQ++ PI+ +D L
Sbjct: 592 LSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 635
Score = 120 (47.3 bits), Expect = 7.6e-25, Sum P(4) = 7.6e-25
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYLVDELNIDESRL-- 720
SSYTA+L + LTVQ++ PI+ +D L I Y + + + R+
Sbjct: 610 SSYTANLAAFLTVQRMDVPIESVDDLADQT-AIEYGTIHGGSSMTFFQNSRYQTYQRMWN 668
Query: 721 -VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
+ P + K+ ++G + A + + E + C + +G + G+G
Sbjct: 669 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIG 728
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
P S + AIL+L EN L+ + KW C +
Sbjct: 729 MPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE 768
Score = 115 (45.5 bits), Expect = 7.6e-25, Sum P(4) = 7.6e-25
Identities = 53/230 (23%), Positives = 98/230 (42%)
Query: 36 ALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAEAL-HLME 94
A+L + +L+I A + +N P LG K+++ + + AE + ++
Sbjct: 5 AILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSEYETAETMCQILP 64
Query: 95 GQTVAIIGPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTT--QSDQYQ 151
VA++GP + +S ++S++ E +VP F QF F S+
Sbjct: 65 KGVVAVLGPSSSPASSSIISNICGEKEVP--HFKVAPEEFIKFQFQRFTTLNLHPSNTDI 122
Query: 152 MAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED--E 209
A+A I++ + I + N L L ++ IS K LSV +D +
Sbjct: 123 SVAVAGILNFFNCTTACLICAKAECLLN----LEKLL--RQFLIS-KDTLSVRMLDDTRD 175
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWL 259
T LL ++ ++ I++H + + + A LGM+ Y +I T+ L
Sbjct: 176 PTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLL 225
Score = 51 (23.0 bits), Expect = 7.6e-25, Sum P(4) = 7.6e-25
Identities = 19/80 (23%), Positives = 32/80 (40%)
Query: 366 FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
+ GG +++ G +S GD N + + + G+ +IG W GLS+
Sbjct: 317 WEGGKGRENNLRVREALGVTARISVSSDGDQENLSSPALELSTEGFCQIGQWHVADGLSM 376
Query: 426 VRPETLYSKPPNRSSSNQRL 445
LY+ + S N L
Sbjct: 377 --DSRLYASNISDSLFNTTL 394
>FB|FBgn0010399 [details] [associations]
symbol:Nmdar1 "NMDA receptor 1" species:7227 "Drosophila
melanogaster" [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS;IDA;NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IGI;IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IPI] [GO:0007616
"long-term memory" evidence=IGI;IMP] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0072375 "medium-term memory"
evidence=IMP] [GO:0008306 "associative learning" evidence=IDA]
[GO:0042331 "phototaxis" evidence=IDA] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0050975 "sensory
perception of touch" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0042331 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
GO:GO:0007476 GO:GO:0072375 InterPro:IPR001828 GO:GO:0055074
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
EMBL:X71790 EMBL:AY070577 PIR:S33754 RefSeq:NP_730940.1
UniGene:Dm.3670 HSSP:Q05586 ProteinModelPortal:Q24418 SMR:Q24418
STRING:Q24418 PRIDE:Q24418 EnsemblMetazoa:FBtr0078763 GeneID:40665
KEGG:dme:Dmel_CG2902 UCSC:CG2902-RA CTD:40665 FlyBase:FBgn0010399
HOGENOM:HOG000184780 InParanoid:Q24418 PhylomeDB:Q24418
GenomeRNAi:40665 NextBio:819920 Bgee:Q24418 Uniprot:Q24418
Length = 997
Score = 178 (67.7 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 584
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 585 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 644
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 704
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 705 DMYFRRQVELSNMYRTMEANNYATAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 763
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 764 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Score = 139 (54.0 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 55/253 (21%), Positives = 101/253 (39%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFL 84
AS PS NIG +LS S + + IK D P + ++M
Sbjct: 32 ASDNPSTYNIGGVLSNSDSEEHFST-TIKHLNFDQQYVPRKVTYYDKTIRMDKNPIKTVF 90
Query: 85 ALAEALHLMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY 140
+ + L +E + A++ + + + VS+ + +P++ S+ D S
Sbjct: 91 NVCDKL--IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHV 148
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
F+RT +Q E++ H+ + +VI I+ D GR + T + +A
Sbjct: 149 SFLRTVPPYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRA 208
Query: 200 PLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + E + T+ L+ + +SR+ +++ V+F A M G G+VWI
Sbjct: 209 TVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIV 268
Query: 256 TSWLSTALDTNSP 268
T N+P
Sbjct: 269 TE--QALFSNNTP 279
Score = 106 (42.4 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 46/171 (26%), Positives = 77/171 (45%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 278 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 327
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 328 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFS-Y- 385
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+++ +K R + ++ +IWPG+ +KP G + P HLR+
Sbjct: 386 -------DSMRAKMRMRINDSE----IIWPGKQRRKPEGIMIPT---HLRL 422
>UNIPROTKB|G3N3K3 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060179 "male mating behavior" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043278 "response to morphine" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021586
"pons maturation" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0018964 "propylene metabolic process"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0008542 "visual
learning" evidence=IEA] [GO:0008355 "olfactory learning"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0007616 "long-term
memory" evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0021987 GO:GO:0008355 GO:GO:0014069 GO:GO:0009986
GO:GO:0043278 GO:GO:0019233 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0008344
GO:GO:0001967 GO:GO:0008542 GO:GO:0007616 GO:GO:0005509
GO:GO:0060079 GO:GO:0001975 GO:GO:0043524 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043065 GO:GO:0050770
GO:GO:0048814 GO:GO:0007585 GO:GO:0006874 GO:GO:0001661
GO:GO:0051963 GO:GO:0035176 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0060179 GO:GO:0004972
InterPro:IPR018882 Pfam:PF10562 OMA:VYRSAAM GO:GO:0021586
EMBL:DAAA02032413 EMBL:DAAA02032414 EMBL:DAAA02032415
Ensembl:ENSBTAT00000065439 Uniprot:G3N3K3
Length = 931
Score = 183 (69.5 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 73/340 (21%), Positives = 140/340 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFC+D+ + + L+ FG NN + E ++ + +G D V
Sbjct: 478 GFCVDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 537
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + +
Sbjct: 538 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLRPLRPRSPFG- 596
Query: 606 VWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV--SALGRXXXXXXXXXXXXX 663
++N E + + WFS+ + + + S R
Sbjct: 597 ----RFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMII 652
Query: 664 NSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVD---ELNIDES-- 718
+SYTA+L + L + + I GI+ R N P + + + VD ++ S
Sbjct: 653 VASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYATVKQSSVDIYFRRQVELSTM 711
Query: 719 -RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
R + ++ E A+A++ + A + D A E S +C+ G++F ++G+G
Sbjct: 712 YRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG 770
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 771 MRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 810
Score = 119 (46.9 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 52/194 (26%), Positives = 81/194 (41%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSF------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR 178
++P+L + S F+RT +Q + E++ Y W VI + DD GR
Sbjct: 115 RIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGR 174
Query: 179 NGIAALGDTLAAKR 192
L +TL +R
Sbjct: 175 AAQKRL-ETLLEER 187
Score = 81 (33.6 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 225 VTALLLEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 269
Score = 70 (29.7 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 400 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 452
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 453 KKVICTGPNDTSPGSPRHTVPQC 475
Score = 52 (23.4 bits), Expect = 1.9e-24, Sum P(5) = 1.9e-24
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 284 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 333
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 334 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 390
Query: 423 LSVV 426
V+
Sbjct: 391 THVI 394
Score = 43 (20.2 bits), Expect = 4.7e-10, Sum P(5) = 4.7e-10
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 705 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 754
>UNIPROTKB|B3P2E5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7220 "Drosophila erecta" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH954181 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001978937.1
ProteinModelPortal:B3P2E5 EnsemblMetazoa:FBtr0131035 GeneID:6552207
KEGG:der:Dere_GG10981 FlyBase:FBgn0103284 Uniprot:B3P2E5
Length = 997
Score = 178 (67.7 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 584
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 585 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 644
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 704
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 705 DMYFRRQVELSNMYRTMEANNYATAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 763
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 764 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Score = 139 (54.0 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 55/253 (21%), Positives = 101/253 (39%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFL 84
AS PS NIG +LS S + + IK D P + ++M
Sbjct: 32 ASDNPSTYNIGGVLSNSDSEEHFST-TIKHLNFDQQYVPRKVTYYDKTIRMDKNPIKTVF 90
Query: 85 ALAEALHLMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY 140
+ + L +E + A++ + + + VS+ + +P++ S+ D S
Sbjct: 91 NVCDKL--IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHV 148
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
F+RT +Q E++ H+ + +VI I+ D GR + T + +A
Sbjct: 149 SFLRTVPPYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRA 208
Query: 200 PLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + E + T+ L+ + +SR+ +++ V+F A M G G+VWI
Sbjct: 209 TVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIV 268
Query: 256 TSWLSTALDTNSP 268
T N+P
Sbjct: 269 TE--QALFSNNTP 279
Score = 103 (41.3 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 278 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 327
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 328 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFS-Y- 385
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+++ +K R + ++ +IWPG+ +KP G + P HL++
Sbjct: 386 -------DSMRAKMRMRINDSE----IIWPGKQRRKPEGIMIPT---HLKL 422
>UNIPROTKB|B4I414 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7238 "Drosophila sechellia" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH480821 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002038420.1
ProteinModelPortal:B4I414 EnsemblMetazoa:FBtr0193612 GeneID:6613956
KEGG:dse:Dsec_GM10627 FlyBase:FBgn0165573 Uniprot:B4I414
Length = 997
Score = 178 (67.7 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 584
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 585 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 644
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 704
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 705 DMYFRRQVELSNMYRTMEANNYATAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 763
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 764 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Score = 139 (54.0 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 55/253 (21%), Positives = 101/253 (39%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFL 84
AS PS NIG +LS S + + IK D P + ++M
Sbjct: 32 ASDNPSTYNIGGVLSNSDSEEHFST-TIKHLNFDQQYVPRKVTYYDKTIRMDKNPIKTVF 90
Query: 85 ALAEALHLMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY 140
+ + L +E + A++ + + + VS+ + +P++ S+ D S
Sbjct: 91 NVCDKL--IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHV 148
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
F+RT +Q E++ H+ + +VI I+ D GR + T + +A
Sbjct: 149 SFLRTVPPYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRA 208
Query: 200 PLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + E + T+ L+ + +SR+ +++ V+F A M G G+VWI
Sbjct: 209 TVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIV 268
Query: 256 TSWLSTALDTNSP 268
T N+P
Sbjct: 269 TE--QALFSNNTP 279
Score = 103 (41.3 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 278 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 327
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 328 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFS-Y- 385
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+++ +K R + ++ +IWPG+ +KP G + P HL++
Sbjct: 386 -------DSMRAKMRMRINDSE----IIWPGKQRRKPEGIMIPT---HLKL 422
>UNIPROTKB|B4PVB0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7245 "Drosophila yakuba" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
EMBL:CM000160 InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002096067.1 ProteinModelPortal:B4PVB0 STRING:B4PVB0
EnsemblMetazoa:FBtr0271792 GeneID:6535418 KEGG:dya:Dyak_GE25274
FlyBase:FBgn0242356 Uniprot:B4PVB0
Length = 997
Score = 178 (67.7 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 584
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 585 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 644
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 704
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 705 DMYFRRQVELSNMYRTMEANNYATAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 763
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 764 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Score = 139 (54.0 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 55/253 (21%), Positives = 101/253 (39%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFL 84
AS PS NIG +LS S + + IK D P + ++M
Sbjct: 32 ASDNPSTYNIGGVLSNSDSEEHFST-TIKHLNFDQQYVPRKVTYYDKTIRMDKNPIKTVF 90
Query: 85 ALAEALHLMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY 140
+ + L +E + A++ + + + VS+ + +P++ S+ D S
Sbjct: 91 NVCDKL--IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHV 148
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
F+RT +Q E++ H+ + +VI I+ D GR + T + +A
Sbjct: 149 SFLRTVPPYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRA 208
Query: 200 PLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + E + T+ L+ + +SR+ +++ V+F A M G G+VWI
Sbjct: 209 TVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIV 268
Query: 256 TSWLSTALDTNSP 268
T N+P
Sbjct: 269 TE--QALFSNNTP 279
Score = 103 (41.3 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 278 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 327
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 328 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFS-Y- 385
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+++ +K R + ++ +IWPG+ +KP G + P HL++
Sbjct: 386 -------DSMRAKMRMRINDSE----IIWPGKQRRKPEGIMIPT---HLKL 422
>UNIPROTKB|B4QWW7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7240 "Drosophila simulans" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CM000364 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002102226.1
ProteinModelPortal:B4QWW7 EnsemblMetazoa:FBtr0219522 GeneID:6726819
KEGG:dsi:Dsim_GD19612 FlyBase:FBgn0191104 Uniprot:B4QWW7
Length = 997
Score = 178 (67.7 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 525 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 584
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 585 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 644
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 704
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 705 DMYFRRQVELSNMYRTMEANNYATAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 763
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 764 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Score = 139 (54.0 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 55/253 (21%), Positives = 101/253 (39%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFL 84
AS PS NIG +LS S + + IK D P + ++M
Sbjct: 32 ASDNPSTYNIGGVLSNSDSEEHFST-TIKHLNFDQQYVPRKVTYYDKTIRMDKNPIKTVF 90
Query: 85 ALAEALHLMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY 140
+ + L +E + A++ + + + VS+ + +P++ S+ D S
Sbjct: 91 NVCDKL--IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHV 148
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
F+RT +Q E++ H+ + +VI I+ D GR + T + +A
Sbjct: 149 SFLRTVPPYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRA 208
Query: 200 PLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + E + T+ L+ + +SR+ +++ V+F A M G G+VWI
Sbjct: 209 TVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIV 268
Query: 256 TSWLSTALDTNSP 268
T N+P
Sbjct: 269 TE--QALFSNNTP 279
Score = 103 (41.3 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 278 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 327
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 328 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFS-Y- 385
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+++ +K R + ++ +IWPG+ +KP G + P HL++
Sbjct: 386 -------DSMRAKMRMRINDSE----IIWPGKQRRKPEGIMIPT---HLKL 422
>MGI|MGI:95817 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95817
GO:GO:0005634 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0043204 GO:GO:0035235 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 EMBL:AC160123 GO:GO:0031960 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0032983 CTD:2900
KO:K05204 OMA:NRAPERL EMBL:AK032029 EMBL:AC122449 EMBL:AC136903
EMBL:AC140387 IPI:IPI00273856 RefSeq:NP_780690.2 UniGene:Mm.370291
ProteinModelPortal:Q8BMF5 SMR:Q8BMF5 STRING:Q8BMF5
PhosphoSite:Q8BMF5 PRIDE:Q8BMF5 Ensembl:ENSMUST00000034515
Ensembl:ENSMUST00000114865 GeneID:110637 KEGG:mmu:110637
InParanoid:Q8BMF5 OrthoDB:EOG402WRF NextBio:364375 Bgee:Q8BMF5
CleanEx:MM_GRIK4 Genevestigator:Q8BMF5
GermOnline:ENSMUSG00000032017 Uniprot:Q8BMF5
Length = 956
Score = 182 (69.1 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG-----HNNPSCTELVRLITAGVYD 540
++G++ GFC+D+ +L + YK+ GDG N + T +V + A D
Sbjct: 438 MEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKAD 495
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIFF 599
AV + I R K+ DF++P++ G+ ++ V ++FL PF+P +W + +
Sbjct: 496 LAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLAY 555
Query: 600 LAVGAVVWILEHRLNDEFRGP-PKRQ-----VVTIFWFSFSTMF----FAHKEKTVS--A 647
LAV V++++ E+ P P Q +V + S F F + T++ A
Sbjct: 556 LAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRA 615
Query: 648 LG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L R SSYTA+L + LTVQ++ PI+ +D L
Sbjct: 616 LSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDL 659
Score = 120 (47.3 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYLVDELNIDESRL-- 720
SSYTA+L + LTVQ++ PI+ +D L I Y + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMEVPIESVDDLADQT-AIEYGTIHGGSSMTFFQNSRYQTYQRMWN 692
Query: 721 -VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
+ P + K+ ++G + A + + E + C + +G + G+G
Sbjct: 693 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIG 752
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
P S + AIL+L EN L+ + KW C +
Sbjct: 753 MPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE 792
Score = 117 (46.2 bits), Expect = 2.6e-24, Sum P(3) = 2.6e-24
Identities = 52/233 (22%), Positives = 101/233 (43%)
Query: 29 PSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAE 88
P + I A+L + +L+I A + +N P LG K+++ + + AE
Sbjct: 22 PHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSEYETAE 81
Query: 89 AL-HLMEGQTVAIIGPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
+ ++ VA++GP + +S ++S++ E +VP + + LQ +
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHP 141
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
S+ A+A I++ + I + N L L ++ IS K LSV
Sbjct: 142 SNTDISVAVAGILNFFNCTTACLICAKAECLLN----LEKLL--RQFLIS-KDTLSVRML 194
Query: 207 ED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATS 257
+D + T LL ++ ++ I++H + + + A LGM+ Y +I T+
Sbjct: 195 DDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN 247
Score = 116 (45.9 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 57/254 (22%), Positives = 102/254 (40%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ ++ I++H + + + A LGM+ Y +I
Sbjct: 186 KDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIF 245
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L+ + ++DD +L + ++F W+ D P
Sbjct: 246 TN-----LEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFSQSLNQSWQENCD-HVP-- 297
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
+ G +D V+ + A+ L+ S++ + L S +I+ G
Sbjct: 298 FTGPALSSALLFDAVYAVVTAVQE-------LNRSQEIGVKP----LSCGSAQIWQHGTS 346
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + + G G FNS G N A +I+ G+++IG W GLS+ L
Sbjct: 347 LMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRNGFQQIGQWHVAEGLSM--DSRL 404
Query: 432 YSKPPNRSSSNQRL 445
Y+ + S N L
Sbjct: 405 YASNISDSLFNTTL 418
>UNIPROTKB|F1NY64 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00821646
Ensembl:ENSGALT00000015322 ArrayExpress:F1NY64 Uniprot:F1NY64
Length = 878
Score = 145 (56.1 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 55/236 (23%), Positives = 100/236 (42%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G++ G+C+D+ T + YKL GDG + +V + G
Sbjct: 431 LEGNDRYEGYCVDLATEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 488
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 489 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 548
Query: 599 FLAVGAVVWILEHRL-----NDEFRGPPKRQV------VTIF---WFSFSTMFFAHKEKT 644
++ V V++++ +EF + Q IF WFS + +
Sbjct: 549 YIGVSVVLFLVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGAFMQQGCDIS 608
Query: 645 VSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+L GR SSYTA+L + LTV+++ SPI+ + L S I Y
Sbjct: 609 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAY 663
Score = 143 (55.4 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L S I Y S + ++ + +
Sbjct: 630 SSYTANLAAFLTVERMVSPIESAEDL-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWT 688
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + +G KG A +++ + C+ VG G+
Sbjct: 689 YMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 748
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
G A P+ S L ++ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 749 GIATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 807
Score = 130 (50.8 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 37/141 (26%), Positives = 60/141 (42%)
Query: 289 DSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAINSFFKQGGNLSFSK 347
D L KFI RW L + + P + Y YD V ++ A + KQ + S+
Sbjct: 261 DDPLVSKFIQRWSTLEEKEYPGAHTSTIKYTSALTYDAVQVMTEAFRNLRKQ--RIEISR 318
Query: 348 DSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVI 407
D + + + G + ++ Q + G G +F+ +G IN ++ +
Sbjct: 319 RGNAGDCLANPAVP----WGHGVEIERALKQVQVEGLTGNIKFDQNGKRINFTINVMELK 374
Query: 408 GTGYRRIGYWSNYSGLSVVRP 428
TG R+IGYWS + VV P
Sbjct: 375 STGPRKIGYWSEVDKM-VVNP 394
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 102 GPQD-AVTSHVVSHVANELQVPLLSFSA--TDPTL---SSLQFPYFVRTTQ------SDQ 149
GP+ S V V N L PL + S+ + T+ + L+ PY + +D+
Sbjct: 377 GPRKIGYWSEVDKMVVNPLDGPLGNESSGLENKTIIVTTILESPYVMMKKNHEMLEGNDR 436
Query: 150 YQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPL 201
Y+ + EI H G++ + I D +G R+ + + + + + I+ APL
Sbjct: 437 YEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APL 495
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 496 TITLVREEVID 506
>ZFIN|ZDB-GENE-051202-1 [details] [associations]
symbol:grin1a "glutamate receptor, ionotropic,
N-methyl D-aspartate 1a" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:BX005379 IPI:IPI00920462
Ensembl:ENSDART00000129744 Uniprot:E7F101
Length = 966
Score = 191 (72.3 bits), Expect = 4.3e-24, Sum P(5) = 4.3e-24
Identities = 65/299 (21%), Positives = 127/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ G+ D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 521 LLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 580
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 581 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 640
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 641 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 699
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 700 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 758
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S AIL ENG ++ + W+ C S+
Sbjct: 759 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSR 817
Score = 107 (42.7 bits), Expect = 4.3e-24, Sum P(5) = 4.3e-24
Identities = 48/173 (27%), Positives = 71/173 (41%)
Query: 29 PSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGF---LA 85
P +VNIGA+LS K + K AV N G K KL H +A
Sbjct: 21 PKIVNIGAVLS-----QKRYEQVFKDAVTQANQ---VYGRDKFKLTAISVTHKANAIQMA 72
Query: 86 LAEALHLMEGQTVAII---GPQ--DAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPY 140
L+ L+ Q AI+ PQ D +T VS+ A ++P++ + S
Sbjct: 73 LSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTTRMSIYSDKSIHL 132
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKR 192
F+RT +Q +++ + W +I I DD GR L +TL +R
Sbjct: 133 SFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRL-ETLLEER 184
Score = 88 (36.0 bits), Expect = 4.3e-24, Sum P(5) = 4.3e-24
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 207 EDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
E +T LL++ E+R+I++ V+ A++L M G+GYVW+
Sbjct: 218 ETNLTALLLEAKELEARVIILSASEEDAAAVYKTARFLNMTGSGYVWL 265
Score = 60 (26.2 bits), Expect = 4.3e-24, Sum P(5) = 4.3e-24
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFT 501
+IWPG T++PRG F + R L+I ++ FV VK + + G C + +T
Sbjct: 397 IIWPGGETERPRG--FQMSTR-LKIVTIHQ---EPFVYVKPTTL-EGTCKEEYT 443
Score = 56 (24.8 bits), Expect = 4.3e-24, Sum P(5) = 4.3e-24
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 306 AKTPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRL 360
++ P+G IGL N A+ D V ++A++I F+ K++ +G +
Sbjct: 277 SEAPDGLIGLQLINGKNESAHISDAVAVVAQSIQELFE--------KENITEPPRGCV-- 326
Query: 361 DSLRIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSN 419
+ I+ G L + ++ + G G FN GD Y I+N + ++G
Sbjct: 327 GNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDDGDRKYAHYSILNYQKSRLIQVGI--- 383
Query: 420 YSGLSVV 426
Y+G VV
Sbjct: 384 YNGTQVV 390
Score = 44 (20.5 bits), Expect = 5.9e-21, Sum P(4) = 5.9e-21
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 286 YTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAIN 334
YTP+ VL +K I N T P + YGF D + LA +N
Sbjct: 442 YTPNGVLIKKVICTGPNETIPGRP--IVPQCCYGF-CIDLLIKLALTMN 487
Score = 43 (20.2 bits), Expect = 7.3e-09, Sum P(5) = 7.3e-09
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 712 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 761
Score = 40 (19.1 bits), Expect = 5.2e-16, Sum P(3) = 5.2e-16
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 212 DLLVKVALTESRIIVVH 228
DLL+K+ALT + VH
Sbjct: 477 DLLIKLALTMNFTYEVH 493
>UNIPROTKB|E7EMV5 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 HGNC:HGNC:4571 IPI:IPI00977433
ProteinModelPortal:E7EMV5 SMR:E7EMV5 Ensembl:ENST00000521843
ArrayExpress:E7EMV5 Bgee:E7EMV5 Uniprot:E7EMV5
Length = 839
Score = 165 (63.1 bits), Expect = 8.0e-24, Sum P(3) = 8.0e-24
Identities = 66/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 119
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 120 FQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGA 179
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 180 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 233
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 234 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 287
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 288 EKGRRTNYTLHVIEMKHDGIRKIGYWN 314
Score = 143 (55.4 bits), Expect = 8.0e-24, Sum P(3) = 8.0e-24
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y + S + ++ + E
Sbjct: 561 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLEAGSTKEFFRRSKIAVFEKMWT 619
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + + ++G KG A +++ + C+ VG G+
Sbjct: 620 YMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 679
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 680 GIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 724
Score = 105 (42.0 bits), Expect = 8.0e-24, Sum P(3) = 8.0e-24
Identities = 25/128 (19%), Positives = 61/128 (47%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 361 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 420
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLA 601
V + I R ++ DF++P++ G+ +++ +K ++FL P +W ++
Sbjct: 421 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 480
Query: 602 VGAVVWIL 609
V V++++
Sbjct: 481 VSVVLFLV 488
Score = 44 (20.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 369 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 424
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 425 TITLVREEVID 435
>RGD|2734 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=TAS] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISO]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=TAS] [GO:0042734 "presynaptic membrane" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2734 GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 174 (66.3 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG-----HNNPSCTELVRLITAGVYD 540
++G++ GFC+D+ +L + YK+ GDG N + T +V + A D
Sbjct: 438 MEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKAD 495
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIFF 599
AV + I R K+ DF++P++ G+ ++ V ++ L PF+P +W + +
Sbjct: 496 LAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSSLDPFSPGVWLFMLLAY 555
Query: 600 LAVGAVVWILEHRLNDEFRGP-PKRQ-----VVTIFWFSFSTMF----FAHKEKTVS--A 647
LAV V++++ E+ P P Q +V + S F F + T++ A
Sbjct: 556 LAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRA 615
Query: 648 LG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L R SSYTA+L + LTVQ++ PI+ +D L
Sbjct: 616 LSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDL 659
Score = 120 (47.3 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYLVDELNIDESRL-- 720
SSYTA+L + LTVQ++ PI+ +D L I Y + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMEVPIESVDDLADQT-AIEYGTIHGGSSMTFFQNSRYQTYQRMWN 692
Query: 721 -VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
+ P + K+ ++G + A + + E + C + +G + G+G
Sbjct: 693 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIG 752
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
P S + AIL+L EN L+ + KW C +
Sbjct: 753 MPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE 792
Score = 120 (47.3 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 58/254 (22%), Positives = 102/254 (40%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ ++ I++H + + + A LGM+ Y +I
Sbjct: 186 KDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIF 245
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L+ + ++DD +L + ++F W+ D P
Sbjct: 246 TN-----LEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFSQSLNQSWQENCD-HVP-- 297
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
+ G +D V+ + A+ L+ S++ + L S +I+ G
Sbjct: 298 FTGPALSSALLFDAVYAVVTAVQE-------LNRSQEIGVKP----LSCGSAQIWQHGTS 346
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + + G G FNS G N A +I+ G+R+IG W GLS+ L
Sbjct: 347 LMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSM--DSRL 404
Query: 432 YSKPPNRSSSNQRL 445
Y+ + S N L
Sbjct: 405 YASNISDSLFNTTL 418
Score = 117 (46.2 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 52/233 (22%), Positives = 101/233 (43%)
Query: 29 PSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAE 88
P + I A+L + +L+I A + +N P LG K+++ + + AE
Sbjct: 22 PHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSEYETAE 81
Query: 89 AL-HLMEGQTVAIIGPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
+ ++ VA++GP + +S ++S++ E +VP + + LQ +
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHP 141
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
S+ A+A I++ + I + N L L ++ IS K LSV
Sbjct: 142 SNTDISVAVAGILNFFNCTTACLICAKAECLLN----LEKLL--RQFLIS-KDTLSVRML 194
Query: 207 ED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATS 257
+D + T LL ++ ++ I++H + + + A LGM+ Y +I T+
Sbjct: 195 DDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN 247
>UNIPROTKB|Q01812 [details] [associations]
symbol:Grik4 "Glutamate receptor ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2734
GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 174 (66.3 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG-----HNNPSCTELVRLITAGVYD 540
++G++ GFC+D+ +L + YK+ GDG N + T +V + A D
Sbjct: 438 MEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKAD 495
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIFF 599
AV + I R K+ DF++P++ G+ ++ V ++ L PF+P +W + +
Sbjct: 496 LAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSSLDPFSPGVWLFMLLAY 555
Query: 600 LAVGAVVWILEHRLNDEFRGP-PKRQ-----VVTIFWFSFSTMF----FAHKEKTVS--A 647
LAV V++++ E+ P P Q +V + S F F + T++ A
Sbjct: 556 LAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRA 615
Query: 648 LG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
L R SSYTA+L + LTVQ++ PI+ +D L
Sbjct: 616 LSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDL 659
Score = 120 (47.3 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYLVDELNIDESRL-- 720
SSYTA+L + LTVQ++ PI+ +D L I Y + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMEVPIESVDDLADQT-AIEYGTIHGGSSMTFFQNSRYQTYQRMWN 692
Query: 721 -VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
+ P + K+ ++G + A + + E + C + +G + G+G
Sbjct: 693 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIG 752
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
P S + AIL+L EN L+ + KW C +
Sbjct: 753 MPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE 792
Score = 120 (47.3 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 58/254 (22%), Positives = 102/254 (40%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ ++ I++H + + + A LGM+ Y +I
Sbjct: 186 KDTLSVRMLDDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIF 245
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L+ + ++DD +L + ++F W+ D P
Sbjct: 246 TN-----LEFSLQRMDSLVDDRVNILGFSIFNQSHAFFQEFSQSLNQSWQENCD-HVP-- 297
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
+ G +D V+ + A+ L+ S++ + L S +I+ G
Sbjct: 298 FTGPALSSALLFDAVYAVVTAVQE-------LNRSQEIGVKP----LSCGSAQIWQHGTS 346
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + + G G FNS G N A +I+ G+R+IG W GLS+ L
Sbjct: 347 LMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSM--DSRL 404
Query: 432 YSKPPNRSSSNQRL 445
Y+ + S N L
Sbjct: 405 YASNISDSLFNTTL 418
Score = 117 (46.2 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 52/233 (22%), Positives = 101/233 (43%)
Query: 29 PSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAE 88
P + I A+L + +L+I A + +N P LG K+++ + + AE
Sbjct: 22 PHSLRIAAILDDPMECSRGERLSITLAKNRINRAPERLGKAKVEVDIFELLRDSEYETAE 81
Query: 89 AL-HLMEGQTVAIIGPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
+ ++ VA++GP + +S ++S++ E +VP + + LQ +
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHP 141
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
S+ A+A I++ + I + N L L ++ IS K LSV
Sbjct: 142 SNTDISVAVAGILNFFNCTTACLICAKAECLLN----LEKLL--RQFLIS-KDTLSVRML 194
Query: 207 ED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATS 257
+D + T LL ++ ++ I++H + + + A LGM+ Y +I T+
Sbjct: 195 DDTRDPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN 247
>UNIPROTKB|E2RFB5 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03000923 Ensembl:ENSCAFT00000007929
Uniprot:E2RFB5
Length = 980
Score = 151 (58.2 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 483 FVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELV-RLITAGV 538
F ++ G+E GFC+D+ LL + +L+ +G N S T +V LI
Sbjct: 433 FQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQK 492
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAI 597
D AV I R K+ DF++P++ G+ ++ V ++FL PF+P +W +
Sbjct: 493 ADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLL 552
Query: 598 FFLAVGAVVWILEHRLND-EFRGP 620
+LAV V++ L RL+ E+ P
Sbjct: 553 AYLAVSCVLF-LAARLSPYEWYNP 575
Score = 139 (54.0 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ P++ D L +N G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 721 VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKN 772
+ P + K+ ++G +A V++ R YA L ST C + +G +
Sbjct: 693 MQSKQPSVFVKSTEEG-----IARVLNSR-YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 746
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P SP +I+ AIL+L EN L+ + KW C +
Sbjct: 747 GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE 791
Score = 122 (48.0 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 83/418 (19%), Positives = 163/418 (38%)
Query: 15 ELFVYRITAQASGRPSVVN---IGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL 71
EL + I A AS V++ + A+L T G+ +LA+ A + +N ++
Sbjct: 4 ELLLLLIVAFASPSRQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARV 63
Query: 72 KLQMQDCNHSGFLALAEAL-HLMEGQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSAT 129
++ + + + + ++ V+++GP + S VSH+ E ++P +
Sbjct: 64 EVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPE 123
Query: 130 D-PTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTL 188
+ P L L+F V S++ A++ I+ + + I + + L + +
Sbjct: 124 ETPRLQYLRFAS-VSLYPSNEDVSLAVSRILKSFNYPSASLICAKAEC----LLRLEELV 178
Query: 189 AAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ IS K LSV +D + T LL ++ + I++ + + ++ A LGM
Sbjct: 179 --RGFLIS-KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGM 235
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKF----ISRWRN 302
Y +I T+ L + +++D +L ++ D F +++
Sbjct: 236 TSAFYKYILTTMDFPILHLDG-----IVEDTSNILGFSMFSTDVHSGPHFSPAKTHSYKH 290
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
+ P + +D V ++ A+ L+ S++ + L S
Sbjct: 291 MCTDTCPQPQLS----AALMFDAVHVVVSAVRE-------LNRSQEIGVKP----LACTS 335
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYW-SN 419
I+ G L + + G G FNS G N I+ G+R IG W SN
Sbjct: 336 ANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVWYSN 393
Score = 73 (30.8 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 23/88 (26%), Positives = 35/88 (39%)
Query: 358 LRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYW 417
L S I+ G L + + G G FNS G N I+ G+R IG W
Sbjct: 331 LACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW 390
Query: 418 SNYSGLSVVRPETLYSKPPNRSSSNQRL 445
YS ++ T +++ +N+ L
Sbjct: 391 --YSNRTLAMNATTLDINLSQTLANKTL 416
Score = 40 (19.1 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 856 QFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN 915
++ + G T + +SR Q +++ K+ V +S + R +
Sbjct: 665 EYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLEST 724
Query: 916 SNRKHIELSSNLS 928
N H L+ NL+
Sbjct: 725 MNEYHRRLNCNLT 737
>UNIPROTKB|B4GF83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7234 "Drosophila persimilis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH479182 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002017168.1
ProteinModelPortal:B4GF83 EnsemblMetazoa:FBtr0187775 GeneID:6591341
KEGG:dpe:Dper_GL22160 FlyBase:FBgn0159752 Uniprot:B4GF83
Length = 1004
Score = 179 (68.1 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 537 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 596
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 597 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 656
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 657 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 716
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 717 DMYFRRQVELSNMYRTMEANNYATAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 775
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 776 AGELFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWI 820
Score = 130 (50.8 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 38/174 (21%), Positives = 75/174 (43%)
Query: 92 LMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY-FVRTTQ 146
L+E + A++ + + + VS+ + +P++ S+ D S F+RT
Sbjct: 108 LIENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVP 167
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSV--- 203
+Q E++ H+ + +VI I+ D GR + T + +A + +
Sbjct: 168 PYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVE 227
Query: 204 -EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIAT 256
E + T+ L+ + +SR+ +++ V+F A M G G+VWI T
Sbjct: 228 FEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVT 281
Score = 102 (41.0 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 45/171 (26%), Positives = 73/171 (42%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 290 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 339
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 340 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGKFS-YD 398
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+ + R + N +IWPG+ +KP G + P HL++
Sbjct: 399 SM----------RAKMRMNINDS--EIIWPGKQNRKPEGIMIPT---HLKV 434
>UNIPROTKB|Q296F7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0004970
"ionotropic glutamate receptor activity" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007616 "long-term
memory" evidence=ISS] [GO:0008355 "olfactory learning"
evidence=ISS] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISS] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS] [GO:0042391 "regulation
of membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0007616 GO:GO:0042391 EMBL:CM000070 InterPro:IPR001828
GO:GO:0055074 GenomeReviews:CM000070_GR GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HSSP:P19491 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
RefSeq:XP_001359355.1 ProteinModelPortal:Q296F7 GeneID:4802433
KEGG:dpo:Dpse_GA15505 FlyBase:FBgn0075522 InParanoid:Q296F7
Uniprot:Q296F7
Length = 1004
Score = 179 (68.1 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 537 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 596
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 597 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 656
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 657 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 716
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 717 DMYFRRQVELSNMYRTMEANNYATAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 775
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 776 AGELFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWI 820
Score = 130 (50.8 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 38/174 (21%), Positives = 75/174 (43%)
Query: 92 LMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY-FVRTTQ 146
L+E + A++ + + + VS+ + +P++ S+ D S F+RT
Sbjct: 108 LIENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVP 167
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSV--- 203
+Q E++ H+ + +VI I+ D GR + T + +A + +
Sbjct: 168 PYYHQADVWLEMLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVE 227
Query: 204 -EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIAT 256
E + T+ L+ + +SR+ +++ V+F A M G G+VWI T
Sbjct: 228 FEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVT 281
Score = 102 (41.0 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 45/171 (26%), Positives = 73/171 (42%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 290 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 339
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 340 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGKFS-YD 398
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+ + R + N +IWPG+ +KP G + P HL++
Sbjct: 399 SM----------RAKMRMNINDS--EIIWPGKQNRKPEGIMIPT---HLKV 434
>UNIPROTKB|B3LZ39 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7217 "Drosophila ananassae" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH902617 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 RefSeq:XP_001953330.1
ProteinModelPortal:B3LZ39 STRING:B3LZ39 EnsemblMetazoa:FBtr0122404
GeneID:6500487 KEGG:dan:Dana_GF17704 FlyBase:FBgn0094722
InParanoid:B3LZ39 KO:K05208 OrthoDB:EOG4RXWF5 InterPro:IPR018882
Pfam:PF10562 Uniprot:B3LZ39
Length = 994
Score = 178 (67.7 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 522 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 581
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 582 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 641
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 642 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 701
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 702 DMYFRRQVELSNMYRTMEANNYATAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 760
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 761 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 805
Score = 137 (53.3 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 53/241 (21%), Positives = 98/241 (40%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFL 84
AS PS NIG +LS S + + IK D P + ++M
Sbjct: 29 ASDNPSTYNIGGVLSNSDSEEHFST-TIKHLNFDQQYVPRKVTYYDKTIRMDKNPIKTVF 87
Query: 85 ALAEALHLMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY 140
+ + L +E + A++ + + + VS+ + +P++ S+ D S
Sbjct: 88 NVCDKL--IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHV 145
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
F+RT +Q E++ H+ + +VI I+ D GR + T + +A
Sbjct: 146 SFLRTVPPYYHQADVWLEMLSHFSYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRA 205
Query: 200 PLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + E + T+ L+ + +SR+ +++ V+F A M G G+VWI
Sbjct: 206 TVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIV 265
Query: 256 T 256
T
Sbjct: 266 T 266
Score = 95 (38.5 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 45/171 (26%), Positives = 71/171 (41%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 275 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIGEAPKDC------G----DS 324
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 325 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFS-YD 383
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+ R N +IWPG+ +KP G + P HL++
Sbjct: 384 N----------ERAKMRMRINDS--EIIWPGKQRRKPEGIMIPT---HLKV 419
>UNIPROTKB|B4KD90 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7230 "Drosophila mojavensis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH933806 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001999411.1
ProteinModelPortal:B4KD90 EnsemblMetazoa:FBtr0175219 GeneID:6573325
KEGG:dmo:Dmoj_GI24494 FlyBase:FBgn0147216 InParanoid:B4KD90
Uniprot:B4KD90
Length = 980
Score = 177 (67.4 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 522 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 581
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 582 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAIWFAWGVLLNSGIGEGTPRSFSA 641
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 642 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 701
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 702 DMYFRRQVELSNMYRTMESNNYVTAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 760
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 761 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 805
Score = 129 (50.5 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 56/250 (22%), Positives = 100/250 (40%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFL 84
AS PS NIG +LS S+ + + I D P + ++M
Sbjct: 29 ASDNPSTYNIGGVLS-SSESEEHFRTTIAHLNFDQQYVPRKVTYYDKTIRMDKNPIKTVF 87
Query: 85 ALAEALHLMEGQTVAII---GPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPY 140
+ + L +E + A++ G ++ VS+ +P++ S+ D S
Sbjct: 88 NVCDKL--IEKRVYAVVVSHGQTSGDLSPAAVSYTTGFYSIPVIGISSRDAAFSDKNIHV 145
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
F+RT +Q E++ H+ + +VI I+ D GR + T + +A
Sbjct: 146 SFLRTVPPYYHQADVWLEMLSHFLYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDARA 205
Query: 200 PLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + E + T+ L+ + +SR+ +V+ V+F A M G G+VWI
Sbjct: 206 TVELIVEFEPKLESFTEHLIDMKTAQSRVYLVYASTEDAQVIFRDAAEYNMTGEGHVWIV 265
Query: 256 TSWLSTALDT 265
T A +T
Sbjct: 266 TEQALHAKNT 275
Score = 98 (39.6 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 47/171 (27%), Positives = 76/171 (44%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 275 TPDGALGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 324
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + I G +S Y
Sbjct: 325 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIRDHQKQHIVGKFS-Y- 382
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
++L +K R + +Q +IW G+ +KP G + P HL++
Sbjct: 383 -------DSLKAKMIMRINDSQ----IIWGGKQRRKPEGIMIPT---HLKV 419
>ZFIN|ZDB-GENE-051202-2 [details] [associations]
symbol:grin1b "glutamate receptor, ionotropic,
N-methyl D-aspartate 1b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-2
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 KO:K05208
InterPro:IPR018882 Pfam:PF10562 HOGENOM:HOG000231491
HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:BX276128 EMBL:AL831768
IPI:IPI00616850 RefSeq:NP_001137603.1 UniGene:Dr.83363 SMR:Q6ZM67
Ensembl:ENSDART00000034849 GeneID:100005675 KEGG:dre:100005675
CTD:100005675 InParanoid:Q6ZM67 NextBio:20786787 Uniprot:Q6ZM67
Length = 937
Score = 192 (72.6 bits), Expect = 1.5e-22, Sum P(4) = 1.5e-22
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G+ D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 521 LLSGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 580
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 581 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 640
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 641 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 699
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 700 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 758
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S AIL ENG ++ + W+ C S+
Sbjct: 759 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSR 817
Score = 107 (42.7 bits), Expect = 1.5e-22, Sum P(4) = 1.5e-22
Identities = 52/189 (27%), Positives = 78/189 (41%)
Query: 16 LFVYRITAQ-ASG--RPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLK 72
LF + I+ A G P VNIGA+LS K + K AV N+ G K K
Sbjct: 5 LFAFLISCSCARGGCEPKTVNIGAVLS-----QKRYEQVFKDAVTQANN---IYGKDKFK 56
Query: 73 LQMQDCNHSGF---LALAEALHLMEGQTVAII---GPQ--DAVTSHVVSHVANELQVPLL 124
+ H +AL+ L+ Q AI+ PQ D +T VS+ A ++P++
Sbjct: 57 MNAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVV 116
Query: 125 SFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAA 183
+ S F+RT +Q +++ + W +I I DD GR
Sbjct: 117 GLTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKR 176
Query: 184 LGDTLAAKR 192
L +TL +R
Sbjct: 177 L-ETLLEER 184
Score = 84 (34.6 bits), Expect = 1.5e-22, Sum P(4) = 1.5e-22
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 207 EDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+ +T LL + E+R+I++ + ++ VA+ L M G+GYVW+
Sbjct: 218 DTNLTALLQEAKELEARVIILSASEDEAAAIYKVARQLNMTGSGYVWL 265
Score = 62 (26.9 bits), Expect = 1.5e-22, Sum P(4) = 1.5e-22
Identities = 30/127 (23%), Positives = 54/127 (42%)
Query: 306 AKTPNGYIGLNAYG-----FYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRL 360
++ P+G +GL + YD V ++A++I F+ K++ +G +
Sbjct: 277 SEAPDGLLGLQLINGKNESAHIYDAVAVVAQSIQELFE--------KENITEPPRGCV-- 326
Query: 361 DSLRIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSN 419
+ I+ G L + ++ + G G FN GD Y I+N T ++G
Sbjct: 327 GNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDDGDRRFAHYSILNYQKTRLVQVGV--- 383
Query: 420 YSGLSVV 426
Y+G VV
Sbjct: 384 YNGSQVV 390
Score = 59 (25.8 bits), Expect = 3.0e-22, Sum P(4) = 3.0e-22
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 410 GYRRIGYWS--NYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGW 461
G RR ++S NY +V+ +Y+ ++ ++ +IWPG T+KP+G+
Sbjct: 361 GDRRFAHYSILNYQKTRLVQVG-VYNGSQVVMNAQRK---IIWPGGETEKPKGY 410
Score = 43 (20.2 bits), Expect = 3.8e-07, Sum P(4) = 3.8e-07
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 712 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 761
>FB|FBgn0039927 [details] [associations]
symbol:CG11155 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0060025 "regulation of synaptic activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0016020 GO:GO:0030054
GO:GO:0045211 GO:GO:0030288 InterPro:IPR001828 EMBL:AE014135
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
FlyBase:FBgn0039927 UniGene:Dm.10449 GeneID:43822
KEGG:dme:Dmel_CG11155 GenomeRNAi:43822 NextBio:836052 EMBL:BT044556
RefSeq:NP_651941.2 RefSeq:NP_726649.2 SMR:Q9V4A0
EnsemblMetazoa:FBtr0089195 EnsemblMetazoa:FBtr0333701
UCSC:CG11155-RA UCSC:CG11155-RC InParanoid:Q9V4A0 OMA:DIPHIEV
Uniprot:Q9V4A0
Length = 910
Score = 149 (57.5 bits), Expect = 3.9e-22, Sum P(4) = 3.9e-22
Identities = 42/150 (28%), Positives = 70/150 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLVD-ELNIDES--RL 720
SSYTA+L + LTV+++ SPI+ L + G + D ++ I + R
Sbjct: 642 SSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRY 701
Query: 721 VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAF 778
+ + K +DG + G A + + + + C + +G + G+G A
Sbjct: 702 MENRKTAVFVKTYEDGIKRVMEGSYAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIAT 761
Query: 779 PRDSPLAVDISTAILKLSENGDLQRIHDKW 808
P+ SP IS AIL+L E G +Q ++DKW
Sbjct: 762 PKGSPWRDKISLAILELQEKGIIQILYDKW 791
Score = 123 (48.4 bits), Expect = 3.9e-22, Sum P(4) = 3.9e-22
Identities = 54/230 (23%), Positives = 97/230 (42%)
Query: 478 VSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNP---SCTELVRL 533
V +E ++ G+ GFCID+ A + + +L+P G P S +V+
Sbjct: 438 VMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQE 497
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPV-RKLDSNAWAFLSPFTPMMW 592
+ D AV + I R + DFT+P++ G+ ++ V + ++F++P +W
Sbjct: 498 LMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIW 557
Query: 593 GVTAIFFLAVGAVVWILEHRLNDEFRGP-P---KRQVV----TI---FWFSFSTMFFAHK 641
++ V ++++ E++ P P + +V +I FWF T
Sbjct: 558 LYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGS 617
Query: 642 EKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
A R SSYTA+L + LTV+++ SPI+ L
Sbjct: 618 GLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDL 667
Score = 115 (45.5 bits), Expect = 3.9e-22, Sum P(4) = 3.9e-22
Identities = 41/177 (23%), Positives = 72/177 (40%)
Query: 3 LSGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSD 62
+ G L C + I ++ P V+ +GA+ + + A K A+ +N +
Sbjct: 14 IQGRSYLKKICCSYIILSILVISNALPPVIRVGAIFTEDERESSIES-AFKYAIYRINKE 72
Query: 63 PTTLGGTKLKLQMQDC-NHSGFLALAEALHLMEGQTVAIIGPQDAV-TSHVVSHVANELQ 120
T L T+L ++ F + +E AI GP DA+ SHV S +
Sbjct: 73 KTLLPNTQLVYDIEYVPRDDSFRTTKKVCSQLEAGVQAIFGPTDALLASHVQS-ICEAYD 131
Query: 121 VPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHG 177
+P + D +S +F + S A +I+ + W +V IY ++D+G
Sbjct: 132 IPHIE-GRIDLEYNSKEFS--INLYPSHTLLTLAYRDIMVYLNWTKVAIIY-EEDYG 184
Score = 56 (24.8 bits), Expect = 3.9e-22, Sum P(4) = 3.9e-22
Identities = 48/239 (20%), Positives = 90/239 (37%)
Query: 198 KAPLSV-EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIAT 256
KA + + +A+ D +L + E I+V T+ + F L M Y
Sbjct: 196 KAEMYIRQASPDSYRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRY----- 250
Query: 257 SWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNL--TDAKTPNGYIG 314
++ T D + D + + R DS + I++ + L T NG
Sbjct: 251 HYMFTTFDLETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPY 310
Query: 315 LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRD 374
+ +D+V+ A ++ F NL D+ + +L S + +N G L +
Sbjct: 311 IQTESALMFDSVYAFANGLH-FL----NL----DNHQNFYIKNLSCTSDQTWNDGISLYN 361
Query: 375 SILQANMTGTAGPARF-NSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLY 432
I A G G +F ++ +I+ + +++GYW G+++ P Y
Sbjct: 362 QINAAITDGLTGTVQFVEGRRNIFK--LDILKLKQEKIQKVGYWHPDDGVNISDPTAFY 418
>RGD|68366 [details] [associations]
symbol:Grid1 "glutamate receptor, ionotropic, delta 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68366 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 CTD:2894 eggNOG:NOG276334
HOVERGEN:HBG051840 KO:K05206 EMBL:U08255 EMBL:Z17238 IPI:IPI00207091
RefSeq:NP_077354.1 UniGene:Rn.10040 ProteinModelPortal:Q62640
SMR:Q62640 MINT:MINT-257777 STRING:Q62640 PhosphoSite:Q62640
PRIDE:Q62640 GeneID:79219 KEGG:rno:79219 UCSC:RGD:68366
ChEMBL:CHEMBL1681629 NextBio:614636 Genevestigator:Q62640
Uniprot:Q62640
Length = 1009
Score = 143 (55.4 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 51/218 (23%), Positives = 92/218 (42%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH--NNPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A L + P G GH +N S ++ + + D A+ I I
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITP 524
Query: 551 NRTKMADFTQPYIES--GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWI 608
R + DF++ Y++ G+++ P K+ + ++ +PF +W A VG ++++
Sbjct: 525 ERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPVVGVLIFV 582
Query: 609 LEH--RLNDEFRGPPKRQV-VTI---FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXX 661
L + + P+ T+ W + E +V+++ R
Sbjct: 583 LNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGESSVNSVAMRIVMGSWWLFTL 642
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
SSYTA+L + LTV ++ SP++ L S + Y
Sbjct: 643 IVCSSYTANLAAFLTVSRMDSPVRTFQDL-SKQLEMSY 679
Score = 133 (51.9 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 82/420 (19%), Positives = 172/420 (40%)
Query: 30 SVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL--KLQMQDCNHSGFLALA 87
S+++IGA+ F N K ++ + AV D++ + L K+ +++ + N+ F A+
Sbjct: 22 SIIHIGAI--FEENAAKDDRV-FQLAVSDLSLNDDILQSEKITYSIKVIEANNP-FQAVQ 77
Query: 88 EALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQS 147
EA LM +A++ +++ + + + + +P L F +P S + +
Sbjct: 78 EACDLMTQGILALVTSTGCASANALQSLTDAMHIPHL-FVQRNPGGSPRTACHLNPSPDG 136
Query: 148 DQYQMAA---------IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF- 197
+ Y +A+ + +V W++ + Y D ++ G+ + D + +S
Sbjct: 137 EAYTLASRPPVRLNDVMLRLVTELRWQKFVMFY-DSEYDIRGLQSFLDQASRLGLDVSLQ 195
Query: 198 KAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLG-MLGTGYVWIAT 256
K ++ + + L R + P H ++ + T +
Sbjct: 196 KVDKNISHVFTSLFTTMKTEELNRYRDTLRRAILLLSPQGAH--SFINEAVETNLASKDS 253
Query: 257 SWLSTALDTNSPFPSDVMDDIQGVLTL-RTYTPDSVLKRKFISRWRNLTD--AKTPNGYI 313
W+ + + P D++ G +T+ R P + +K + ++ GY+
Sbjct: 254 HWVFVNEEISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCMRNNHRISSLLCDPQEGYL 313
Query: 314 G-LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLL 372
L Y YD+V +LA N+F ++ + + + L+ I+ S + +NGG +
Sbjct: 314 QMLQISNLYLYDSVLMLA---NAFHRKLEDRKWHSMASLNCIR-----KSTKPWNGGRSM 365
Query: 373 RDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGY--------RRIGYWSNYSGLS 424
D+I + ++TG G F D NP Y ++GT Y R++ W + GL+
Sbjct: 366 LDTIKKGHITGLTGVMEFRE--DSSNP-YVQFEILGTTYSETFGKDMRKLATWDSEKGLN 422
Score = 124 (48.7 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 52/188 (27%), Positives = 78/188 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYL----VDELNIDES 718
SSYTA+L + LTV ++ SP++ L S + Y +S Y + L D +
Sbjct: 646 SSYTANLAAFLTVSRMDSPVRTFQDL-SKQLEMSYGTVRDSAVYEYFRAKGTNPLEQDST 704
Query: 719 -----RLVPLNS-PEEYAKALKDGPHKG--GVAAVVDDRAYAELFLSTR--CEFSIVGQV 768
R + N + +G K G A + D A E T C +++G
Sbjct: 705 FAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNS 764
Query: 769 FTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDVD 824
+ G+G A SP S IL+L + GDL + KW + C S A+ D
Sbjct: 765 ISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLTSHSSAQTDGK 824
Query: 825 RLQLKSFS 832
L+L SF+
Sbjct: 825 SLKLHSFA 832
>ZFIN|ZDB-GENE-030616-53 [details] [associations]
symbol:gria3b "glutamate receptor, ionotrophic, AMPA
3b" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030616-53 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 HOVERGEN:HBG051839 KO:K05199 OMA:MVQQFLQ
OrthoDB:EOG4XKV68 EMBL:AL732632 EMBL:BX511226 EMBL:BX539334
EMBL:AF525746 IPI:IPI00510089 RefSeq:NP_938174.1 UniGene:Dr.14975
SMR:Q71E60 Ensembl:ENSDART00000043180 GeneID:368416 KEGG:dre:368416
CTD:368416 InParanoid:Q71E60 NextBio:20812912 Uniprot:Q71E60
Length = 883
Score = 146 (56.5 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 50/268 (18%), Positives = 115/268 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ ++ HY W + + +Y D D G + + A+ + A +++ ++ S+ + E +
Sbjct: 138 AVLSLLSHYKWDKFVYLY-DTDRGFSILQAIMEAAVANNWQVTARSVGSITDPQ-EFRRI 195
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ +R V+ LG GY +I + T + + F
Sbjct: 196 IEEMDRRQEKRYLIDCEVDRINVILEQVVTLGKNSRGYHYIIANLGFTNISLDKVFLGGA 255
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGY-IGLNAYGFYAYDTVWLLARA 332
+I G + P++++ ++F+ RW L + + P L +YD + ++A A
Sbjct: 256 --NISG---FQIINPENLVVQQFLQRWDRLDEREFPEAKNTPLKYTSALSYDAILVIAEA 310
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F+S
Sbjct: 311 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDS 364
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
G N ++ + G R+IGYW+ +
Sbjct: 365 FGRRTNYTIDVYEMKTGGPRKIGYWNEF 392
Score = 145 (56.1 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 45/164 (27%), Positives = 77/164 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVP 722
SSYTA+L + LTV+++ SPI+ + L + + G + + + ++ + E
Sbjct: 635 SSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSY 694
Query: 723 LNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWG 775
+ S P +AK DG KG A +++ + C+ VG G+G
Sbjct: 695 MKSAEPSVFAKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYG 754
Query: 776 FAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 755 VATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 126 (49.4 bits), Expect = 6.2e-20, Sum P(3) = 6.2e-20
Identities = 65/322 (20%), Positives = 135/322 (41%)
Query: 26 SGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPT-TLGGTKLKLQMQDCNHSGFL 84
+G P+ +NIG L ST V + + A + AV N++ T L + + S
Sbjct: 18 AGFPNQINIGGLFMRST-VQEHS--AFRFAVQLYNTNQNMTEKPFHLNYNVDNLESSNSF 74
Query: 85 ALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVR 143
++ A + V AI G D + + ++ L ++ S P S +QF +R
Sbjct: 75 SVTHAFCSQFSRGVYAIFGFYDKKSMNTLTSFCGALHTSFVTPSY--PIDSDVQFVIQMR 132
Query: 144 TTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSV 203
A+ ++ HY W + + +Y D D G + + A+ + A +++ ++ S+
Sbjct: 133 PPLK-----GAVLSLLSHYKWDKFVYLY-DTDRGFSILQAIMEAAVANNWQVTARSVGSI 186
Query: 204 EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTAL 263
+ E ++ ++ + + ++ +R V+ LG GY +I + T +
Sbjct: 187 TDPQ-EFRRIIEEMDRRQEKRYLIDCEVDRINVILEQVVTLGKNSRGYHYIIANLGFTNI 245
Query: 264 DTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGY-IGLNAYGFYA 322
+ F +I G + P++++ ++F+ RW L + + P L +
Sbjct: 246 SLDKVFLGGA--NISG---FQIINPENLVVQQFLQRWDRLDEREFPEAKNTPLKYTSALS 300
Query: 323 YDTVWLLARAINSFFKQGGNLS 344
YD + ++A A +Q ++S
Sbjct: 301 YDAILVIAEAFRYLRRQRVDVS 322
Score = 106 (42.4 bits), Expect = 5.4e-22, Sum P(3) = 5.4e-22
Identities = 29/136 (21%), Positives = 65/136 (47%)
Query: 481 REFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGH---NNP---SCTELVRLI 534
+ + ++G+E G+C+D+ + + + Y+L DG +P S +V +
Sbjct: 430 KNHMHLEGNEKYEGYCVDLASEIAKHV--GIKYRLSIVMDGKYGARDPETKSWNGMVGEL 487
Query: 535 TAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWG 593
G D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 488 VYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 547
Query: 594 VTAIFFLAVGAVVWIL 609
++ V V++++
Sbjct: 548 CIVFAYIGVSVVLFLV 563
Score = 44 (20.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + +EI H G + ++I +D +G NG+ +G+ L R I+ APL
Sbjct: 444 YCVDLASEIAKHVGIKYRLSIVMDGKYGARDPETKSWNGM--VGE-LVYGRADIAV-APL 499
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 500 TITLVREEVID 510
Score = 38 (18.4 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 418 SNYSGLSVVRPETL 431
+N SG ++ PE L
Sbjct: 255 ANISGFQIINPENL 268
>UNIPROTKB|B4JHV0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7222 "Drosophila grimshawi" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH916369 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_001989796.1 ProteinModelPortal:B4JHV0 STRING:B4JHV0
EnsemblMetazoa:FBtr0154407 GeneID:6563892 KEGG:dgr:Dgri_GH18993
FlyBase:FBgn0126460 InParanoid:B4JHV0 OMA:WLEMLSH Uniprot:B4JHV0
Length = 982
Score = 176 (67.0 bits), Expect = 5.8e-22, Sum P(3) = 5.8e-22
Identities = 60/285 (21%), Positives = 125/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 520 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 579
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 580 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 639
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 640 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 699
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 700 DMYFRRQVELSNMYRTMESNNYVTAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 758
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 759 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 803
Score = 128 (50.1 bits), Expect = 5.8e-22, Sum P(3) = 5.8e-22
Identities = 57/259 (22%), Positives = 104/259 (40%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFL 84
AS PS NIG +LS S + + I D P + ++M
Sbjct: 27 ASDNPSTYNIGGVLSNSDSEEHF-RTTIAHLNFDQQYVPRKVTYYDKTIRMDKNPIKTVF 85
Query: 85 ALAEALHLMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY 140
+ + L +E + A++ + + + VS+ + +P++ S+ D S
Sbjct: 86 NVCDKL--IEKRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHV 143
Query: 141 -FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA 199
F+RT +Q E++ H+ + +VI I+ D GR + T + +A
Sbjct: 144 SFLRTVPPYYHQADVWLEMLSHFLYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRA 203
Query: 200 PLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + E + T+ L+ + +SR+ +++ V+F A M G G+VWI
Sbjct: 204 TVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIV 263
Query: 256 TSWLSTALDTNSPFPSDVM 274
T AL N+ P V+
Sbjct: 264 TE---QALHANNT-PDGVL 278
Score = 93 (37.8 bits), Expect = 5.8e-22, Sum P(3) = 5.8e-22
Identities = 42/170 (24%), Positives = 69/170 (40%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 273 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 322
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
+ G L + N+TG G F+ +GD I Y++IN+ +++ +S
Sbjct: 323 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINI--REHQKQHVVGKFS- 379
Query: 423 LSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
Y P + +IW G+ +KP G + P HL++
Sbjct: 380 ---------YDSPRGKMRMRINDSEIIWGGKQKRKPEGIMIPT---HLKL 417
>UNIPROTKB|B4LZB5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7244 "Drosophila virilis" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH940650 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002054630.1 ProteinModelPortal:B4LZB5 STRING:B4LZB5
EnsemblMetazoa:FBtr0240485 GeneID:6630672 KEGG:dvi:Dvir_GJ24560
FlyBase:FBgn0211640 InParanoid:B4LZB5 OMA:HVANELH Uniprot:B4LZB5
Length = 984
Score = 171 (65.3 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 59/285 (20%), Positives = 124/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 522 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 581
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 582 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 641
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 642 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 701
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ +A++D KG + A + D + E S CE
Sbjct: 702 DMYFRRQVELSNMYRTMESNNYVTAEQAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 760
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ IL+ E+G ++++ +W+
Sbjct: 761 AGELFGRSGYGVGLQKGSPWTDAVTLTILEFHESGFMEKLDKQWI 805
Score = 131 (51.2 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 58/263 (22%), Positives = 107/263 (40%)
Query: 25 ASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSD----PTTLGGTKLKLQMQDCNH 80
AS PS NIG +LS S + +L + +N D P + ++M
Sbjct: 29 ASDNPSTYNIGGVLSNSES-----ELHFHTTIAHLNFDQQYVPRKVTYYDKTIRMDKNPI 83
Query: 81 SGFLALAEALHLMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSL 136
+ + L +E + A++ + + + VS+ + +P++ S+ D S
Sbjct: 84 KTVFNVCDKL--IEKRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDK 141
Query: 137 QFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRI 195
F+RT +Q E++ H+ + +VI I+ D GR + T +
Sbjct: 142 NIHVSFLRTVPPYYHQADVWLELLSHFLYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDV 201
Query: 196 SFKAPLSV----EATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGY 251
+A + + E + T+ L+ + +SR+ +++ V+F A M G G+
Sbjct: 202 DVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGH 261
Query: 252 VWIATSWLSTALDTNSPFPSDVM 274
VWI T AL N+ P V+
Sbjct: 262 VWIVTE---QALHANNT-PDGVL 280
Score = 95 (38.5 bits), Expect = 6.2e-22, Sum P(3) = 6.2e-22
Identities = 45/171 (26%), Positives = 76/171 (44%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP+G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 275 TPDGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 324
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRR-IGYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + +G +S Y
Sbjct: 325 AVNWESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKQHLVGKFS-Y- 382
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
++L +K R + ++ +IW G+ +KP G + P HL++
Sbjct: 383 -------DSLRAKMRMRINDSE----IIWGGKQKRKPEGIMIPT---HLKV 419
>UNIPROTKB|Q9ULK0 [details] [associations]
symbol:GRID1 "Glutamate receptor ionotropic, delta-1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 DrugBank:DB00142 GO:GO:0030288 EMBL:CH471142
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AK127168
EMBL:BC039263 EMBL:AB033046 IPI:IPI00374337 RefSeq:NP_060021.1
UniGene:Hs.530653 ProteinModelPortal:Q9ULK0 SMR:Q9ULK0
STRING:Q9ULK0 PhosphoSite:Q9ULK0 DMDM:38372397 PaxDb:Q9ULK0
PRIDE:Q9ULK0 Ensembl:ENST00000327946 GeneID:2894 KEGG:hsa:2894
UCSC:uc001kdl.1 CTD:2894 GeneCards:GC10M087349 HGNC:HGNC:4575
MIM:610659 neXtProt:NX_Q9ULK0 PharmGKB:PA28970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 InParanoid:Q9ULK0 KO:K05206
OMA:LLPWICQ PhylomeDB:Q9ULK0 BindingDB:Q9ULK0 ChEMBL:CHEMBL2936
GenomeRNAi:2894 NextBio:11451 ArrayExpress:Q9ULK0 Bgee:Q9ULK0
CleanEx:HS_GRID1 Genevestigator:Q9ULK0 GermOnline:ENSG00000182771
Uniprot:Q9ULK0
Length = 1009
Score = 143 (55.4 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 51/218 (23%), Positives = 90/218 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH--NNPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A L + P G GH +N S ++ + + D A+ I I
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITP 524
Query: 551 NRTKMADFTQPYIES--GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWI 608
R + DF++ Y++ G+++ P K+ + ++ +PF +W A VG ++++
Sbjct: 525 ERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPVVGVLIFV 582
Query: 609 LEH----RLNDEFRGPPKRQVV--TIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXX 661
L R + P + W + E +V+++ R
Sbjct: 583 LNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWWLFTL 642
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
SSYTA+L + LTV ++ +PI+ L S + Y
Sbjct: 643 IVCSSYTANLAAFLTVSRMDNPIRTFQDL-SKQVEMSY 679
Score = 131 (51.2 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 82/420 (19%), Positives = 171/420 (40%)
Query: 30 SVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL--KLQMQDCNHSGFLALA 87
S+++IGA+ F N K ++ + AV D++ + L K+ +++ + N+ F A+
Sbjct: 22 SIIHIGAI--FEENAAKDDRV-FQLAVSDLSLNDDILQSEKITYSIKVIEANNP-FQAVQ 77
Query: 88 EALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQS 147
EA LM +A++ +++ + + + + +P L F +P S + +
Sbjct: 78 EACDLMTQGILALVTSTGCASANALQSLTDAMHIPHL-FVQRNPGGSPRTACHLNPSPDG 136
Query: 148 DQYQMAA---------IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF- 197
+ Y +A+ + +V W++ + Y D ++ G+ + D + +S
Sbjct: 137 EAYTLASRPPVRLNDVMLRLVTELRWQKFVMFY-DSEYDIRGLQSFLDQASRLGLDVSLQ 195
Query: 198 KAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLG-MLGTGYVWIAT 256
K ++ + + L R + P H ++ + T +
Sbjct: 196 KVDKNISHVFTSLFTTMKTEELNRYRDTLRRAILLLSPQGAH--SFINEAVETNLASKDS 253
Query: 257 SWLSTALDTNSPFPSDVMDDIQGVLTL-RTYTPDSVLKRKFISRWRNLTD--AKTPNGYI 313
W+ + + P D++ G +T+ R P + +K ++ GY+
Sbjct: 254 HWVFVNEEISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCTRNNHRISSLLCDPQEGYL 313
Query: 314 G-LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLL 372
L Y YD+V +LA N+F ++ + + + L+ I+ S + +NGG +
Sbjct: 314 QMLQISNLYLYDSVLMLA---NAFHRKLEDRKWHSMASLNCIR-----KSTKPWNGGRSM 365
Query: 373 RDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGY--------RRIGYWSNYSGLS 424
D+I + ++TG G F D NP Y ++GT Y R++ W + GL+
Sbjct: 366 LDTIKKGHITGLTGVMEFRE--DSSNP-YVQFEILGTTYSETFGKDMRKLATWDSEKGLN 422
Score = 122 (48.0 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 52/188 (27%), Positives = 78/188 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYL----VDELNIDES 718
SSYTA+L + LTV ++ +PI+ L S + Y +S Y + L D +
Sbjct: 646 SSYTANLAAFLTVSRMDNPIRTFQDL-SKQVEMSYGTVRDSAVYEYFRAKGTNPLEQDST 704
Query: 719 -----RLVPLNS-PEEYAKALKDGPHKG--GVAAVVDDRAYAELFLSTR--CEFSIVGQV 768
R + N + + +G K G A + D A E T C +++G
Sbjct: 705 FAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNS 764
Query: 769 FTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDVD 824
+ G+G A SP S IL+L + GDL + KW C S A+ D
Sbjct: 765 ISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTSHASAQADGK 824
Query: 825 RLQLKSFS 832
L+L SF+
Sbjct: 825 SLKLHSFA 832
>UNIPROTKB|Q16478 [details] [associations]
symbol:GRIK5 "Glutamate receptor ionotropic, kainate 5"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=IEA] [GO:0051649 "establishment of localization
in cell" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0071333
"cellular response to glucose stimulus" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0071333 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0043204 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0035249 EMBL:CH471126
DrugBank:DB00142 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CleanEx:HS_GRIK2 EMBL:S40369 EMBL:AJ249209 IPI:IPI00103335
IPI:IPI00293288 PIR:I57936 RefSeq:NP_002079.3 UniGene:Hs.367799
ProteinModelPortal:Q16478 SMR:Q16478 IntAct:Q16478
MINT:MINT-1427286 STRING:Q16478 PhosphoSite:Q16478 DMDM:209572626
PRIDE:Q16478 DNASU:2901 Ensembl:ENST00000262895
Ensembl:ENST00000301218 GeneID:2901 KEGG:hsa:2901 UCSC:uc002osi.1
CTD:2901 GeneCards:GC19M042502 H-InvDB:HIX0022359
H-InvDB:HIX0027521 HGNC:HGNC:4583 MIM:600283 neXtProt:NX_Q16478
PharmGKB:PA28977 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP
BindingDB:Q16478 ChEMBL:CHEMBL2675 GenomeRNAi:2901 NextBio:11483
Bgee:Q16478 CleanEx:HS_GRIK5 Genevestigator:Q16478
GermOnline:ENSG00000105737 GO:GO:0031630 Uniprot:Q16478
Length = 980
Score = 147 (56.8 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 483 FVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVY 539
F ++ G+E GFC+D+ LL + +L+ +G N S T +V +
Sbjct: 434 FQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIF 598
D AV I R K+ DF++P++ G+ ++ V ++FL PF+P +W +
Sbjct: 494 DLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLA 553
Query: 599 FLAVGAVVWILEHRLND-EFRGP 620
+LAV V++ L RL+ E+ P
Sbjct: 554 YLAVSCVLF-LAARLSPYEWYNP 575
Score = 139 (54.0 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ P++ D L +N G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 721 VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKN 772
+ P + K+ ++G +A V++ R YA L ST C + +G +
Sbjct: 693 MQSKQPSVFVKSTEEG-----IARVLNSR-YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 746
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P SP +I+ AIL+L EN L+ + KW C +
Sbjct: 747 GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE 791
Score = 108 (43.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 65/331 (19%), Positives = 134/331 (40%)
Query: 15 ELFVYRITAQASGRPSVVN---IGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL 71
EL + I A AS V++ + A+L T G+ +LA+ A + +N ++
Sbjct: 4 ELLLLLIVAFASPSCQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARV 63
Query: 72 KLQMQDCNHSGFLALAEAL-HLMEGQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSAT 129
++ + + + + ++ V+++GP + S VSH+ E ++P +
Sbjct: 64 EVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPE 123
Query: 130 D-PTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTL 188
+ P L L+F V S++ A++ I+ + + I + + L + +
Sbjct: 124 ETPRLQYLRFAS-VSLYPSNEDVSLAVSRILKSFNYPSASLICAKAEC----LLRLEELV 178
Query: 189 AAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ IS K LSV +D + T LL ++ + I++ + + ++ A LGM
Sbjct: 179 --RGFLIS-KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGM 235
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRN 302
Y +I T+ L + +++D +L + +F+ WR
Sbjct: 236 TSAFYKYILTTMDFPILHLDG-----IVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRE 290
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAI 333
+A T Y+G +D V ++ A+
Sbjct: 291 NCEAST---YLGPALSAALMFDAVHVVVSAV 318
Score = 101 (40.6 bits), Expect = 8.4e-21, Sum P(3) = 8.4e-21
Identities = 54/254 (21%), Positives = 97/254 (38%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ + I++ + + ++ A LGM Y +I
Sbjct: 185 KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYIL 244
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L + +++D +L + +F+ WR +A T
Sbjct: 245 TTMDFPILHLDG-----IVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEAST--- 296
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
Y+G +D V ++ A+ L+ S++ + L S I+ G
Sbjct: 297 YLGPALSAALMFDAVHVVVSAVRE-------LNRSQEIGVKP----LACTSANIWPHGTS 345
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + G G FNS G N I+ G+R IG W YS ++ T
Sbjct: 346 LMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW--YSNRTLAMNATT 403
Query: 432 YSKPPNRSSSNQRL 445
+++ +N+ L
Sbjct: 404 LDINLSQTLANKTL 417
Score = 40 (19.1 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 856 QFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN 915
++ + G T + +SR Q +++ K+ V +S + R +
Sbjct: 665 EYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLEST 724
Query: 916 SNRKHIELSSNLS 928
N H L+ NL+
Sbjct: 725 MNEYHRRLNCNLT 737
>UNIPROTKB|F1PY46 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000031011 Uniprot:F1PY46
Length = 921
Score = 191 (72.3 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 504 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 563
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 564 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 623
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 624 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 682
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 683 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 741
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 742 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 800
Score = 121 (47.7 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
Identities = 61/256 (23%), Positives = 102/256 (39%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSF------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGW-REVIAIYVDDDHGR 178
++P+L + S T+S + + ++ Y EV+A H
Sbjct: 115 RIPVLGLTTRMSIYSDKNIHTKFVCTRSHSQENSFFFRMLFIYSCSHEVVA--PSPSHCG 172
Query: 179 NGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVF 238
T + R + K L + +T LL++ E+R+I++ + V+
Sbjct: 173 AQATKREQTASEARPGQAEKV-LQFDPGTKNVTALLMEARELEARVIILSASEDDAATVY 231
Query: 239 HVAQYLGMLGTGYVWI 254
A L M G+GYVW+
Sbjct: 232 RAAAMLNMTGSGYVWL 247
Score = 96 (38.9 bits), Expect = 8.1e-09, Sum P(4) = 8.1e-09
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 456 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 515
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 516 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 575
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 576 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 613
Score = 70 (29.7 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 378 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 430
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 431 KKVICTGPNDTSPGSPRHTVPQC 453
Score = 52 (23.4 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 262 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 311
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 312 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 368
Query: 423 LSVV 426
V+
Sbjct: 369 THVI 372
Score = 43 (20.2 bits), Expect = 8.1e-09, Sum P(4) = 8.1e-09
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 695 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 744
>UNIPROTKB|J9NUD0 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:EEQAFRF EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 Ensembl:ENSCAFT00000048003 Uniprot:J9NUD0
Length = 918
Score = 204 (76.9 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 73/333 (21%), Positives = 141/333 (42%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+CID+ ++L ++ +L+ +G + +++ + D AV
Sbjct: 512 GNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVA 571
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K DF++P++ G+ ++ + + ++FL+P +P +W + +L V
Sbjct: 572 PLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVS 631
Query: 604 AVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ + D P +VV T+ FWF ++ E AL R
Sbjct: 632 CVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRI 691
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV 710
SSYTA+L + LTV+++ SPI D L + + G + +
Sbjct: 692 IGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFK 751
Query: 711 -DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA--AVVDDRAYAELFLSTRCEFSIVG 766
+++ E ++S P K ++G + A A++ + E C + +G
Sbjct: 752 KSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTADYALLMESTTIEYVTQRNCNLTQIG 811
Query: 767 QVFTKNGWGFAFPRDSPLAVDISTAILKLSENG 799
+ G+G P SP I+ AIL + G
Sbjct: 812 GLIDSKGYGIGTPMGSPYRDKITIAILSAAGGG 844
Score = 138 (53.6 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 60/244 (24%), Positives = 98/244 (40%)
Query: 27 GRPSVVNIGALLSFS----TNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
G P V+ IG + ++ V + A + + + +N + T L T L +Q + H
Sbjct: 85 GMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHD 144
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + VAI GP ++ V + N L+VP + L + ++
Sbjct: 145 SFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFY 203
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPL 201
V AI ++V + WR +Y DD G + L +A R I K
Sbjct: 204 VNLYPDYASLSHAILDLVQYLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIR- 259
Query: 202 SVEATEDEITDLLVKVAL-TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLS 260
+ D+ LL ++ E RII +H + A +GM+ Y +I T+
Sbjct: 260 QLPLDSDDSRPLLKEMKRGREFRIIFDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDL 318
Query: 261 TALD 264
ALD
Sbjct: 319 YALD 322
Score = 66 (28.3 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 66/278 (23%), Positives = 106/278 (38%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVAL-TESRIIV 226
A V DD G+ L + + A R I K + D+ LL ++ E RII
Sbjct: 229 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIR-QLPLDSDDSRPLLKEMKRGREFRIIF 285
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+H + A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 286 DCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNVD 342
Query: 287 TPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFS 346
P + +W P GL G D LL A++ ++ +
Sbjct: 343 NPHV---SAIVEKWSMERLQAAPRAESGL-LDGVMMTDAA-LLYDAVHIV-----SVCYQ 392
Query: 347 KDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YEI 403
+ +++ +Q H R + R GG + + I +A G G FN L +I
Sbjct: 393 RAPQMTVNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 448
Query: 404 INVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
I++ G ++G WS GL++ E + PN + S
Sbjct: 449 ISLKEDGLEKVGVWSPAEGLNIT--EVAKGRGPNVTDS 484
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRI 804
F + S L D I+ L E+G L+++
Sbjct: 434 FNKTSGLRTDFDLDIISLKEDG-LEKV 459
>UNIPROTKB|E2R3A6 [details] [associations]
symbol:E2R3A6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882
Pfam:PF10562 ProteinModelPortal:E2R3A6 Ensembl:ENSCAFT00000035191
Uniprot:E2R3A6
Length = 957
Score = 191 (72.3 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 524 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 583
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 584 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 643
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 644 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 702
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 703 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 761
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 762 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 820
Score = 118 (46.6 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 51/194 (26%), Positives = 81/194 (41%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSF------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR 178
++P+L + S F+RT +Q + E++ Y W +I + DD GR
Sbjct: 115 RIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGR 174
Query: 179 NGIAALGDTLAAKR 192
L +TL +R
Sbjct: 175 AAQKRL-ETLLEER 187
Score = 101 (40.6 bits), Expect = 8.7e-12, Sum P(4) = 8.7e-12
Identities = 73/364 (20%), Positives = 143/364 (39%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 284 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 333
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G ++
Sbjct: 334 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHV 393
Query: 423 L----SVVRPETLYSKPPN-RSSSNQRLYSVIWPGQTTQKPR---GWV---FPNNGRHLR 471
+ ++ P KP + S+ ++ ++ KP G F NG ++
Sbjct: 394 IPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVK 453
Query: 472 IGV---PNRVS-FREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGH-- 522
+ PN S R V + GFCID+ + + L+ FG
Sbjct: 454 KVICTGPNDTSPARHTVP----QCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERV 509
Query: 523 NNPSCTE---LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSN 579
NN + E ++ + +G D V + I R + +F++P+ GL ++ S
Sbjct: 510 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 569
Query: 580 AWAFLSPFTPMMWGVTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFS 632
+F+ PF +W + + V ++++L+ ++N E + + WFS
Sbjct: 570 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 629
Query: 633 FSTM 636
+ +
Sbjct: 630 WGVL 633
Score = 81 (33.6 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 225 VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 269
Score = 43 (20.2 bits), Expect = 8.7e-12, Sum P(4) = 8.7e-12
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 715 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 764
>UNIPROTKB|F1P2J9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00586084
ProteinModelPortal:F1P2J9 Ensembl:ENSGALT00000040369 Uniprot:F1P2J9
Length = 880
Score = 194 (73.4 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 66/299 (22%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 418 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 477
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 478 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 537
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 538 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 596
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 597 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 655
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S AILK ENG ++ + W+ C S+
Sbjct: 656 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSR 714
Score = 147 (56.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 103 PQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDH 161
P D +T VS+ A ++P++ + S F+RT +Q E++
Sbjct: 13 PNDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRV 72
Query: 162 YGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALTE 221
+ W VI I DD GR L +TL +R + K L + +T LL++ E
Sbjct: 73 FNWNHVILIVSDDHEGRAAQKKL-ETLLEERESKAEKV-LQFDPGTKNVTSLLLEAKELE 130
Query: 222 SRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+R+I++ + V+ A L M G+GYVW+
Sbjct: 131 ARVIILSASEDDAATVYRSAAMLNMTGSGYVWL 163
Score = 113 (44.8 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 75/365 (20%), Positives = 146/365 (40%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ F+ K++ +G + +
Sbjct: 178 PDGVIGLQLINGKNESAHISDAVAVVAQAVHDLFE--------KENITDPPRGCV--GNT 227
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + + G G FN GD Y I+N+ ++G ++ +
Sbjct: 228 NIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNV 287
Query: 423 LS----VVRPETLYSKPPNRSSS--------NQRLYSVIWPGQTTQKPRGWVFPNNGRHL 470
L+ ++ P KP S +Q + + P Q R F NG +
Sbjct: 288 LTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTCRE-EFTINGDPV 346
Query: 471 R---IGVPNR-VSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGH- 522
+ PN + R V++ GFCID+ ++ + L+ FG
Sbjct: 347 KKVFCTGPNETIPGRPTVAL----CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 402
Query: 523 -NNPSCTE---LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDS 578
NN + E ++ + +G D V + I R + +F++P+ GL ++ S
Sbjct: 403 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRS 462
Query: 579 NAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWF 631
+F+ PF +W + + V ++++L+ ++N E + + WF
Sbjct: 463 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 522
Query: 632 SFSTM 636
S+ +
Sbjct: 523 SWGVL 527
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 512 PYKLIPFGD---GHNNPSCTELVRLI--TAGVYDAAV 543
P KL P + H++PSCT R I TA DA V
Sbjct: 835 PGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACV 871
Score = 43 (20.2 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 609 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 658
>UNIPROTKB|J9P242 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2901 KO:K05205 OMA:NINSVME EMBL:AAEX03000923
RefSeq:XP_541594.4 Ensembl:ENSCAFT00000043369 GeneID:484480
KEGG:cfa:484480 Uniprot:J9P242
Length = 980
Score = 147 (56.8 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 483 FVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVY 539
F ++ G+E GFC+D+ LL + +L+ +G N S T +V +
Sbjct: 434 FQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIF 598
D AV I R K+ DF++P++ G+ ++ V ++FL PF+P +W +
Sbjct: 494 DLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLA 553
Query: 599 FLAVGAVVWILEHRLND-EFRGP 620
+LAV V++ L RL+ E+ P
Sbjct: 554 YLAVSCVLF-LAARLSPYEWYNP 575
Score = 139 (54.0 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ P++ D L +N G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 721 VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKN 772
+ P + K+ ++G +A V++ R YA L ST C + +G +
Sbjct: 693 MQSKQPSVFVKSTEEG-----IARVLNSR-YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 746
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P SP +I+ AIL+L EN L+ + KW C +
Sbjct: 747 GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE 791
Score = 105 (42.0 bits), Expect = 3.2e-21, Sum P(3) = 3.2e-21
Identities = 65/331 (19%), Positives = 133/331 (40%)
Query: 15 ELFVYRITAQASGRPSVVN---IGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL 71
EL + I A AS V++ + A+L T G+ +LA+ A + +N ++
Sbjct: 4 ELLLLLIVAFASPSRQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARV 63
Query: 72 KLQMQDCNHSGFLALAEAL-HLMEGQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSAT 129
++ + + + + ++ V+++GP + S VSH+ E ++P +
Sbjct: 64 EVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPE 123
Query: 130 D-PTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTL 188
+ P L L+F V S++ A++ I+ + + I + + L + +
Sbjct: 124 ETPRLQYLRFAS-VSLYPSNEDVSLAVSRILKSFNYPSASLICAKAEC----LLRLEELV 178
Query: 189 AAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ IS K LSV +D + T LL ++ + I++ + + ++ A LGM
Sbjct: 179 --RGFLIS-KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGM 235
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRN 302
Y +I T+ L + +++D +L + +F+ WR
Sbjct: 236 TSAFYKYILTTMDFPILHLDG-----IVEDTSNILGFSMFNTSHPFYPEFVRSLNMSWRE 290
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAI 333
+A T Y G +D V ++ A+
Sbjct: 291 NCEAST---YPGPALSAALMFDAVHVVVSAV 318
Score = 97 (39.2 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 54/254 (21%), Positives = 96/254 (37%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ + I++ + + ++ A LGM Y +I
Sbjct: 185 KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYIL 244
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L + +++D +L + +F+ WR +A T
Sbjct: 245 TTMDFPILHLDG-----IVEDTSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEAST--- 296
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
Y G +D V ++ A+ L+ S++ + L S I+ G
Sbjct: 297 YPGPALSAALMFDAVHVVVSAVRE-------LNRSQEIGVKP----LACTSANIWPHGTS 345
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + G G FNS G N I+ G+R IG W YS ++ T
Sbjct: 346 LMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW--YSNRTLAMNATT 403
Query: 432 YSKPPNRSSSNQRL 445
+++ +N+ L
Sbjct: 404 LDINLSQTLANKTL 417
Score = 40 (19.1 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 856 QFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN 915
++ + G T + +SR Q +++ K+ V +S + R +
Sbjct: 665 EYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLEST 724
Query: 916 SNRKHIELSSNLS 928
N H L+ NL+
Sbjct: 725 MNEYHRRLNCNLT 737
>UNIPROTKB|Q38PU0 [details] [associations]
symbol:GRIK5 "KA2" species:9541 "Macaca fascicularis"
[GO:0005622 "intracellular" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0043197
GO:GO:0035235 GO:GO:0005622 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159937
ProteinModelPortal:Q38PU0 Uniprot:Q38PU0
Length = 891
Score = 147 (56.8 bits), Expect = 3.7e-21, Sum P(3) = 3.7e-21
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 483 FVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVY 539
F ++ G+E GFC+D+ LL + +L+ +G N S T +V +
Sbjct: 434 FQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIF 598
D AV I R K+ DF++P++ G+ ++ V ++FL PF+P +W +
Sbjct: 494 DLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLA 553
Query: 599 FLAVGAVVWILEHRLND-EFRGP 620
+LAV V++ L RL+ E+ P
Sbjct: 554 YLAVSCVLF-LAARLSPYEWYNP 575
Score = 139 (54.0 bits), Expect = 3.7e-21, Sum P(3) = 3.7e-21
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ P++ D L +N G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 721 VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKN 772
+ P + K+ ++G +A V++ R YA L ST C + +G +
Sbjct: 693 MQSKQPSVFVKSTEEG-----IARVLNSR-YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 746
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P SP +I+ AIL+L EN L+ + KW C +
Sbjct: 747 GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE 791
Score = 103 (41.3 bits), Expect = 3.7e-21, Sum P(3) = 3.7e-21
Identities = 65/331 (19%), Positives = 133/331 (40%)
Query: 15 ELFVYRITAQASGRPSVVN---IGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL 71
EL + I A AS V++ + A+L T G+ +LA+ A + +N ++
Sbjct: 4 ELLLLLIVAFASPSCQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARV 63
Query: 72 KLQMQDCNHSGFLALAEAL-HLMEGQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSAT 129
++ + + + + ++ V+++GP + S VSH+ E ++P +
Sbjct: 64 EVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPE 123
Query: 130 D-PTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTL 188
+ P L L+F V S++ A++ I+ + + I + + L + +
Sbjct: 124 ETPRLQYLRFAS-VSLYPSNEDVSLAVSRILKSFNYPSASLICAKAEC----LLRLEELV 178
Query: 189 AAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ IS K LSV +D + T LL ++ + I++ + + ++ A LGM
Sbjct: 179 --RGFLIS-KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGM 235
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRN 302
Y +I T+ L + +++D +L + +F+ WR
Sbjct: 236 TSAFYKYILTTMDFPILHLDG-----IVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRE 290
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAI 333
+A T Y G +D V ++ A+
Sbjct: 291 NCEAST---YPGPALSAALMFDAVHVVVSAV 318
Score = 96 (38.9 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 54/254 (21%), Positives = 96/254 (37%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ + I++ + + ++ A LGM Y +I
Sbjct: 185 KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYIL 244
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L + +++D +L + +F+ WR +A T
Sbjct: 245 TTMDFPILHLDG-----IVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEAST--- 296
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
Y G +D V ++ A+ L+ S++ + L S I+ G
Sbjct: 297 YPGPALSAALMFDAVHVVVSAVRE-------LNRSQEIGVKP----LACTSANIWPHGTS 345
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + G G FNS G N I+ G+R IG W YS ++ T
Sbjct: 346 LMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW--YSNRTLAMNATT 403
Query: 432 YSKPPNRSSSNQRL 445
+++ +N+ L
Sbjct: 404 LDINLSQTLANKTL 417
Score = 40 (19.1 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 856 QFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN 915
++ + G T + +SR Q +++ K+ V +S + R +
Sbjct: 665 EYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLEST 724
Query: 916 SNRKHIELSSNLS 928
N H L+ NL+
Sbjct: 725 MNEYHRRLNCNLT 737
>ZFIN|ZDB-GENE-030131-8013 [details] [associations]
symbol:gria4b "glutamate receptor, ionotropic,
AMPA 4b" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-8013 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
KO:K05200 EMBL:AF525748 IPI:IPI00509003 RefSeq:NP_997917.1
UniGene:Dr.81140 ProteinModelPortal:Q71E58 SMR:Q71E58 GeneID:336069
KEGG:dre:336069 CTD:336069 InParanoid:Q71E58 NextBio:20811163
Uniprot:Q71E58
Length = 904
Score = 138 (53.6 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 51/211 (24%), Positives = 88/211 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 590 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 649
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + ++ G + + + ++ + E + S P + K
Sbjct: 650 ERMVSPIESAEDLAKQTDIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPTVFTKTT 709
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
+G KG A +++ C+ VG G+G A P+ S L +
Sbjct: 710 AEGVARVRKSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSQLGSAV 769
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQG 818
+ A+LKL+E G L ++ +KW + C S G
Sbjct: 770 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 800
Score = 138 (53.6 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 63/318 (19%), Positives = 121/318 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + ++S + VE D
Sbjct: 141 ALLSLLDHYDWNRFVFLY-DTDRGYSILQAIMEKAGQNGWQVS---AICVENFNDASYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL + + + V+ R + +G GY +I + L D N
Sbjct: 197 LLEDLDRRQEKTFVIDLEAERLNNMLEQIVSVGKHVKGYHYIMAN-LGFK-DINLERFMH 254
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G L ++ V+K + RW L + P YD V ++A A
Sbjct: 255 GGANVTG-FQLVDFSNPMVIK--LMQRWNKLDQREYPGSDAPPKYTSALTYDGVMVMAEA 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+ +Q ++S I G + +N G + ++ Q + G G +F+
Sbjct: 312 FRNLRRQKVDIS------RRGIAGDCLANPAAPWNQGIDMERTLKQVRLQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPG 452
+G +N ++ + G RRIGYW++ L + + L + + + I G
Sbjct: 366 YGRRVNYTMDVFELKSNGPRRIGYWNDADKLVLTQDHALLPNETYGMENRTVIVTTIMEG 425
Query: 453 QTTQKPRGW-VFPNNGRH 469
+ W ++ N ++
Sbjct: 426 PYVMLKKNWEMYEGNEQY 443
Score = 113 (44.8 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 26/128 (20%), Positives = 61/128 (47%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSC---TELVRLITAGVYDAA 542
+G+E G+C+D+ + + + ++P G G +P +V + G + A
Sbjct: 438 EGNEQYEGYCVDLASEIAKHIGFKYKISIVPDGKYGARDPETKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLA 601
V + I R ++ DF++P++ G+ +++ +K ++FL P +W ++
Sbjct: 498 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 602 VGAVVWIL 609
V V++++
Sbjct: 558 VSVVLFLV 565
Score = 51 (23.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 146 QSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISF 197
Q + Y + +EI H G++ I+I D +G NG+ +G+ + K I+
Sbjct: 442 QYEGYCVDLASEIAKHIGFKYKISIVPDGKYGARDPETKIWNGM--VGELVYGK-AEIAV 498
Query: 198 KAPLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 -APLTITLVREEVID 512
>MGI|MGI:95812 [details] [associations]
symbol:Grid1 "glutamate receptor, ionotropic, delta 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95812 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:CH466573 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 CTD:2894 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 KO:K05206 OMA:LLPWICQ
EMBL:D10171 EMBL:AK138279 EMBL:CT009532 EMBL:AC114572 EMBL:AC154388
EMBL:AC154730 EMBL:AC163280 EMBL:AC169510 EMBL:CT030647
IPI:IPI00123542 PIR:JH0266 RefSeq:NP_032192.2 UniGene:Mm.121569
UniGene:Mm.413604 ProteinModelPortal:Q61627 SMR:Q61627
MINT:MINT-1791814 STRING:Q61627 PhosphoSite:Q61627 PaxDb:Q61627
PRIDE:Q61627 DNASU:14803 Ensembl:ENSMUST00000043349 GeneID:14803
KEGG:mmu:14803 InParanoid:Q3UUL5 OrthoDB:EOG4ZCT3V ChiTaRS:GRID1
NextBio:286969 Bgee:Q61627 CleanEx:MM_GRID1 Genevestigator:Q61627
Uniprot:Q61627
Length = 1009
Score = 141 (54.7 bits), Expect = 7.8e-21, Sum P(3) = 7.8e-21
Identities = 51/218 (23%), Positives = 92/218 (42%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH--NNPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A L + P G GH +N S ++ + + D A+ I I
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITP 524
Query: 551 NRTKMADFTQPYIES--GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWI 608
R + DF++ Y++ G+++ P K+ + ++ +PF +W A VG ++++
Sbjct: 525 ERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPVVGVLIFV 582
Query: 609 LEH--RLNDEFRGPPKRQV-VTI---FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXX 661
L + + P+ T+ W + E +V+++ R
Sbjct: 583 LNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGESSVNSVAMRIVMGSWWLFTL 642
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
SSYTA+L + LTV ++ +PI+ L S + Y
Sbjct: 643 IVCSSYTANLAAFLTVSRMDNPIRTFQDL-SKQLEMSY 679
Score = 133 (51.9 bits), Expect = 7.8e-21, Sum P(3) = 7.8e-21
Identities = 82/420 (19%), Positives = 172/420 (40%)
Query: 30 SVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL--KLQMQDCNHSGFLALA 87
S+++IGA+ F N K ++ + AV D++ + L K+ +++ + N+ F A+
Sbjct: 22 SIIHIGAI--FEENAAKDDRV-FQLAVSDLSLNDDILQSEKITYSIKVIEANNP-FQAVQ 77
Query: 88 EALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQS 147
EA LM +A++ +++ + + + + +P L F +P S + +
Sbjct: 78 EACDLMTQGILALVTSTGCASANALQSLTDAMHIPHL-FVQRNPGGSPRTACHLNPSPDG 136
Query: 148 DQYQMAA---------IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF- 197
+ Y +A+ + +V W++ + Y D ++ G+ + D + +S
Sbjct: 137 EAYTLASRPPVRLNDVMLRLVTELRWQKFVMFY-DSEYDIRGLQSFLDQASRLGLDVSLQ 195
Query: 198 KAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLG-MLGTGYVWIAT 256
K ++ + + L R + P H ++ + T +
Sbjct: 196 KVDKNISHVFTSLFTTMKTEELNRYRDTLRRAILLLSPQGAH--SFINEAVETNLASKDS 253
Query: 257 SWLSTALDTNSPFPSDVMDDIQGVLTL-RTYTPDSVLKRKFISRWRNLTD--AKTPNGYI 313
W+ + + P D++ G +T+ R P + +K + ++ GY+
Sbjct: 254 HWVFVNEEISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCMRNNHRISSLLCDPQEGYL 313
Query: 314 G-LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLL 372
L Y YD+V +LA N+F ++ + + + L+ I+ S + +NGG +
Sbjct: 314 QMLQISNLYLYDSVLMLA---NAFHRKLEDRKWHSMASLNCIR-----KSTKPWNGGRSM 365
Query: 373 RDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGY--------RRIGYWSNYSGLS 424
D+I + ++TG G F D NP Y ++GT Y R++ W + GL+
Sbjct: 366 LDTIKKGHITGLTGVMEFRE--DSSNP-YVQFEILGTTYSETFGKDMRKLATWDSEKGLN 422
Score = 114 (45.2 bits), Expect = 7.8e-21, Sum P(3) = 7.8e-21
Identities = 50/188 (26%), Positives = 77/188 (40%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYL----VDELNIDES 718
SSYTA+L + LTV ++ +PI+ L S + Y +S Y + L D +
Sbjct: 646 SSYTANLAAFLTVSRMDNPIRTFQDL-SKQLEMSYGTVRDSAVYEYFRAKGTNPLEQDST 704
Query: 719 -----RLVPLNS-PEEYAKALKDGPHKG--GVAAVVDDRAYAELFLSTR--CEFSIVGQV 768
R + N + +G K G A + D A E T C +++G
Sbjct: 705 FAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNS 764
Query: 769 FTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDVD 824
+ G+G A SP S IL+L + GDL + KW + C S + +
Sbjct: 765 ISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLTSHSSTQTEGK 824
Query: 825 RLQLKSFS 832
L+L SF+
Sbjct: 825 SLKLHSFA 832
>MGI|MGI:95818 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5 (gamma
2)" species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0008066 "glutamate receptor
activity" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IGI] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0030425 "dendrite"
evidence=ISO] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IMP] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IGI] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043113 "receptor clustering" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=ISO] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] [GO:0051649
"establishment of localization in cell" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95818 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0060079 GO:GO:0042734
GO:GO:0035249 InterPro:IPR001828 EMBL:CH466593 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2901 KO:K05205
OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630 EMBL:D10011
EMBL:AC125468 IPI:IPI00123538 PIR:JH0589 RefSeq:NP_032194.2
UniGene:Mm.2879 ProteinModelPortal:Q61626 IntAct:Q61626
STRING:Q61626 PhosphoSite:Q61626 PaxDb:Q61626 PRIDE:Q61626
Ensembl:ENSMUST00000003468 GeneID:14809 KEGG:mmu:14809
InParanoid:Q61626 ChiTaRS:GRIK5 NextBio:286991
Genevestigator:Q61626 GermOnline:ENSMUSG00000003378 Uniprot:Q61626
Length = 979
Score = 147 (56.8 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 483 FVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVY 539
F ++ G+E GFC+D+ LL + +L+ +G N S T +V +
Sbjct: 434 FQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIF 598
D AV I R K+ DF++P++ G+ ++ V ++FL PF+P +W +
Sbjct: 494 DLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLA 553
Query: 599 FLAVGAVVWILEHRLND-EFRGP 620
+LAV V++ L RL+ E+ P
Sbjct: 554 YLAVSCVLF-LAARLSPYEWYNP 575
Score = 139 (54.0 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ P++ D L +N G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 721 VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKN 772
+ P + K+ ++G +A V++ R YA L ST C + +G +
Sbjct: 693 MQSKQPSVFVKSTEEG-----IARVLNSR-YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 746
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P SP +I+ AIL+L EN L+ + KW C +
Sbjct: 747 GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE 791
Score = 101 (40.6 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 65/331 (19%), Positives = 133/331 (40%)
Query: 15 ELFVYRITAQASGRPSVVN---IGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL 71
EL + I A A+ V++ + A+L T G+ +LA+ A + +N ++
Sbjct: 4 ELLLLLIVAFANPSCQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARV 63
Query: 72 KLQMQDCNHSGFLALAEAL-HLMEGQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSAT 129
++ + + + + ++ V+++GP + S VSH+ E ++P +
Sbjct: 64 EVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPE 123
Query: 130 D-PTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTL 188
+ P L L+F V S++ A++ I+ + + I + + L + +
Sbjct: 124 ETPRLQYLRFAS-VSLYPSNEDVSLAVSRILKSFNYPSASLICAKAEC----LLRLEELV 178
Query: 189 AAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ IS K LSV +D + T LL ++ + I++ + + +V A LGM
Sbjct: 179 --RGFLIS-KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRKASELGM 235
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRN 302
Y +I T+ L + +++D +L + +F+ WR
Sbjct: 236 TSAFYKYILTTMDFPILHLDG-----IVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRE 290
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAI 333
+A T Y G +D V ++ A+
Sbjct: 291 NCEAST---YPGPALSAALMFDAVHVVVSAV 318
Score = 97 (39.2 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 55/254 (21%), Positives = 96/254 (37%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ + I++ + + +V A LGM Y +I
Sbjct: 185 KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRKASELGMTSAFYKYIL 244
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L + +++D +L + +F+ WR +A T
Sbjct: 245 TTMDFPILHLDG-----IVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEAST--- 296
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
Y G +D V ++ A+ L+ S++ + L S I+ G
Sbjct: 297 YPGPALSAALMFDAVHVVVSAVRE-------LNRSQEIGVKP----LACTSANIWPHGTS 345
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + G G FNS G N I+ G+R IG W YS ++ T
Sbjct: 346 LMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW--YSNRTLAMNATT 403
Query: 432 YSKPPNRSSSNQRL 445
+++ +N+ L
Sbjct: 404 LDINLSQTLANKTL 417
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 856 QFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN 915
++ + G T + +SR Q +++ K+ V +S + R +
Sbjct: 665 EYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLEST 724
Query: 916 SNRKHIELSSNLS 928
N H L+ NL+
Sbjct: 725 MNEYHRRLNCNLT 737
>RGD|2735 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006621 "protein
retention in ER lumen" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IDA] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0017124
"SH3 domain binding" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IPI]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISO] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=IEA;ISO] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
[GO:0051649 "establishment of localization in cell" evidence=IMP]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2735 GO:GO:0014069
GO:GO:0043525 GO:GO:0071333 GO:GO:0017124 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0035249 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 GO:GO:0032983 PDB:3QLU PDB:3QLV PDBsum:3QLU PDBsum:3QLV
CTD:2901 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630
EMBL:Z11581 EMBL:U08258 IPI:IPI00207006 PIR:JH0592 RefSeq:NP_113696.1
UniGene:Rn.74042 PDB:3OM0 PDB:3OM1 PDBsum:3OM0 PDBsum:3OM1
ProteinModelPortal:Q63273 SMR:Q63273 STRING:Q63273 PhosphoSite:Q63273
PRIDE:Q63273 Ensembl:ENSRNOT00000027578 GeneID:24407 KEGG:rno:24407
UCSC:RGD:2735 InParanoid:Q63273 BindingDB:Q63273 ChEMBL:CHEMBL4041
NextBio:603217 Genevestigator:Q63273 GermOnline:ENSRNOG00000020310
Uniprot:Q63273
Length = 979
Score = 147 (56.8 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 483 FVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVY 539
F ++ G+E GFC+D+ LL + +L+ +G N S T +V +
Sbjct: 434 FQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKA 493
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAIF 598
D AV I R K+ DF++P++ G+ ++ V ++FL PF+P +W +
Sbjct: 494 DLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLA 553
Query: 599 FLAVGAVVWILEHRLND-EFRGP 620
+LAV V++ L RL+ E+ P
Sbjct: 554 YLAVSCVLF-LAARLSPYEWYNP 575
Score = 139 (54.0 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ P++ D L +N G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 721 VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKN 772
+ P + K+ ++G +A V++ R YA L ST C + +G +
Sbjct: 693 MQSKQPSVFVKSTEEG-----IARVLNSR-YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 746
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P SP +I+ AIL+L EN L+ + KW C +
Sbjct: 747 GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE 791
Score = 101 (40.6 bits), Expect = 8.3e-21, Sum P(3) = 8.3e-21
Identities = 65/331 (19%), Positives = 133/331 (40%)
Query: 15 ELFVYRITAQASGRPSVVN---IGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL 71
EL + I A A+ V++ + A+L T G+ +LA+ A + +N ++
Sbjct: 4 ELLLLLIVAFANPSCQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARV 63
Query: 72 KLQMQDCNHSGFLALAEAL-HLMEGQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSAT 129
++ + + + + ++ V+++GP + S VSH+ E ++P +
Sbjct: 64 EVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPE 123
Query: 130 D-PTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTL 188
+ P L L+F V S++ A++ I+ + + I + + L + +
Sbjct: 124 ETPRLQYLRFAS-VSLYPSNEDVSLAVSRILKSFNYPSASLICAKAEC----LLRLEELV 178
Query: 189 AAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ IS K LSV +D + T LL ++ + I++ + + +V A LGM
Sbjct: 179 --RGFLIS-KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRKASELGM 235
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRN 302
Y +I T+ L + +++D +L + +F+ WR
Sbjct: 236 TSAFYKYILTTMDFPILHLDG-----IVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRE 290
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAI 333
+A T Y G +D V ++ A+
Sbjct: 291 NCEAST---YPGPALSAALMFDAVHVVVSAV 318
Score = 97 (39.2 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 55/254 (21%), Positives = 96/254 (37%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ + I++ + + +V A LGM Y +I
Sbjct: 185 KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRKASELGMTSAFYKYIL 244
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L + +++D +L + +F+ WR +A T
Sbjct: 245 TTMDFPILHLDG-----IVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEAST--- 296
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
Y G +D V ++ A+ L+ S++ + L S I+ G
Sbjct: 297 YPGPALSAALMFDAVHVVVSAVRE-------LNRSQEIGVKP----LACTSANIWPHGTS 345
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + G G FNS G N I+ G+R IG W YS ++ T
Sbjct: 346 LMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW--YSNRTLAMNATT 403
Query: 432 YSKPPNRSSSNQRL 445
+++ +N+ L
Sbjct: 404 LDINLSQTLANKTL 417
Score = 40 (19.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 856 QFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN 915
++ + G T + +SR Q +++ K+ V +S + R +
Sbjct: 665 EYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLEST 724
Query: 916 SNRKHIELSSNLS 928
N H L+ NL+
Sbjct: 725 MNEYHRRLNCNLT 737
>UNIPROTKB|F1N246 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00707470 Ensembl:ENSBTAT00000026819
OMA:ICALICL Uniprot:F1N246
Length = 869
Score = 210 (79.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 93/436 (21%), Positives = 176/436 (40%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+ +G ++ +V+ + D AV
Sbjct: 418 GNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVA 477
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 478 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 537
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 538 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 597
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFARNYL 709
SSYTA+L + LTV+++ SPI D L + + G + S +
Sbjct: 598 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFK 657
Query: 710 VDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEFSIV 765
+++ E ++S ++ A K +G H+ A++ + E C + +
Sbjct: 658 KSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTDYALLMESTSIEYVTQRNCNLTQI 717
Query: 766 GQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLDVDR 825
G + G+G P P ++ A++ L + L + W+ +G D
Sbjct: 718 GGLIDSKGYGVGTPIADPFMRKLTLAMINLQQEKSLHFNQEYWI-------RGHGRPKDS 770
Query: 826 LQLK----SFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQTF- 880
LQL SF+ +++ + QF S +A ++
Sbjct: 771 LQLAPWLGSFNIASLFLIISQSLPNSVFICYMYFQFHGRKKQSLGVEKCLSFNAIMEELG 830
Query: 881 LSFVNEKEDEVKSRSK 896
+S N+K+ + KSR+K
Sbjct: 831 ISLKNQKKLKKKSRTK 846
Score = 124 (48.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 47/220 (21%), Positives = 87/220 (39%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
V +LA K AV +N + T + T L +Q N F A A + A+ GP
Sbjct: 14 VEELAFKFAVTSINRNRTLMPNTTLTYDIQKINLFDSFEASRRACDQLALGVAALFGPSH 73
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + P++ + +++ A+ ++V +Y W+
Sbjct: 74 SSSVSAVQSICNALEVPHIQTRWKHPSVDNRDL-FYINLYPDYAAISRAVLDLVLYYNWK 132
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K +D LL ++ +
Sbjct: 133 TVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDA-KPLLKEMKKGKEFY 187
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
++ + + ++GM+ Y + T+ ALD
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 227
Score = 78 (32.5 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 61/278 (21%), Positives = 109/278 (39%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITD 212
A+ ++V +Y W+ V +Y D G+ L + + A R I K +D
Sbjct: 121 AVLDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDA-KP 175
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + ++ + + ++GM+ Y + T+ ALD S
Sbjct: 176 LLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSG 235
Query: 273 VMDDIQGVLTLRTYTPD-SVLKRKFISRWRNLTDAKTPNGYIG--LNAYGFYAYDTVWLL 329
V ++ G L P S + K+ S R + G + + YD V+++
Sbjct: 236 V--NMTGFRLLNIDNPHVSAIIEKW-SMERLQAPPRPETGLLDGMMTTEAALMYDAVYMV 292
Query: 330 ARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANM-TGTAGPA 388
A A + + L+ +S +Q H R R+ G + I +A G G
Sbjct: 293 AIASH----RASQLT------VSSLQCH-RHKPWRL---GPRFMNLIKEARWWDGLTGRI 338
Query: 389 RFNSHGDLINPA-YEIINVIGTGYRRIGYWSNYSGLSV 425
FN L +II++ G +IG W++ SGL++
Sbjct: 339 TFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNM 376
>ZFIN|ZDB-GENE-020125-5 [details] [associations]
symbol:gria3a "glutamate receptor, ionotropic, AMPA
3a" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
HOVERGEN:HBG051839 KO:K05199 EMBL:AF525745 IPI:IPI00483360
RefSeq:NP_938153.1 UniGene:Dr.133590 ProteinModelPortal:Q71E61
SMR:Q71E61 GeneID:170452 KEGG:dre:170452 CTD:170452
InParanoid:Q71E61 NextBio:20797093 Uniprot:Q71E61
Length = 886
Score = 148 (57.2 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 47/178 (26%), Positives = 82/178 (46%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVP 722
SSYTA+L + LTV+++ SPI+ + L + + G + + + ++ + E
Sbjct: 638 SSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSY 697
Query: 723 LNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWG 775
+ S P + K DG KG A +++ + C+ VG G+G
Sbjct: 698 MKSAEPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYG 757
Query: 776 FAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQGAKLDVDRLQLKSFS 832
A P+ S L +S A+LKLSE G L ++ +KW + C ++ + + D+ S S
Sbjct: 758 VATPKGSALRTPVSLAVLKLSEQGILDKLKNKWWYDKGECGTKDS-VSKDKTSALSLS 814
Score = 121 (47.7 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 47/268 (17%), Positives = 109/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ ++ HY W + + +Y D D G + + A+ ++ +++ ++ ++ E +
Sbjct: 141 ALLSLLAHYKWEKFVYLY-DTDRGFSILQAIMESAVMNNWQVTARSVGNI-VDPLEYRRI 198
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + G GY +I + T + + FP
Sbjct: 199 IEEMDRRQEKRFLIDCEVERINSILEQVVIAGKNSRGYHYILANLGFTNMSLDKVFPGGA 258
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
+I G + PDS + ++F+ R L + + P Y +D + ++A A
Sbjct: 259 --NITG---FQIINPDSPIVQQFLQRRERLDEREFPESRSSPLKYTSALTHDAILVIAEA 313
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F+S
Sbjct: 314 FRYLRRQ--RVDISRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDS 367
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
G N ++ + G R+IGYW+ +
Sbjct: 368 FGRRSNYTVDVYEMKPGGARKIGYWNEF 395
Score = 114 (45.2 bits), Expect = 1.5e-20, Sum P(3) = 1.5e-20
Identities = 29/136 (21%), Positives = 65/136 (47%)
Query: 481 REFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGH---NNPSCTELVRLITAG 537
R ++ ++G++ G+C+D+ + + + YKL DG +P ++
Sbjct: 433 RNYMQLEGNDRYEGYCVDLASEIAKHV--GIKYKLSIVADGKYGARDPETKTWNGMVGEL 490
Query: 538 VY---DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWG 593
VY D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 491 VYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM 550
Query: 594 VTAIFFLAVGAVVWIL 609
++ V V++++
Sbjct: 551 CIVFAYIGVSVVLFLV 566
Score = 106 (42.4 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 63/332 (18%), Positives = 134/332 (40%)
Query: 16 LFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPT-TLGGTKLKLQ 74
L + + +G P+ +NIG L ST V + + A + AV N++ T L
Sbjct: 11 LLPWLVLQTQAGFPNQINIGGLFMRST-VQEHS--AFRFAVQLYNTNQNITEKPFHLNYN 67
Query: 75 MQDCNHSGFLALAEALHLMEGQTV-AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTL 133
+ + S ++ A + V AI G D + + ++ L ++ S PT
Sbjct: 68 VDNLESSNSFSVTHAFCSQFSRGVYAIFGFYDRRSMNTLTSFCGALHTSFITPSF--PTD 125
Query: 134 SSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRC 193
+ +QF +R + A+ ++ HY W + + +Y D D G + + A+ ++
Sbjct: 126 TDVQFVLQMRPSLR-----GALLSLLAHYKWEKFVYLY-DTDRGFSILQAIMESAVMNNW 179
Query: 194 RISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVW 253
+++ ++ ++ E ++ ++ + + ++ R + G GY +
Sbjct: 180 QVTARSVGNI-VDPLEYRRIIEEMDRRQEKRFLIDCEVERINSILEQVVIAGKNSRGYHY 238
Query: 254 IATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYI 313
I + T + + FP +I G + PDS + ++F+ R L + + P
Sbjct: 239 ILANLGFTNMSLDKVFPGGA--NITG---FQIINPDSPIVQQFLQRRERLDEREFPESRS 293
Query: 314 GLNAY-GFYAYDTVWLLARAINSFFKQGGNLS 344
Y +D + ++A A +Q ++S
Sbjct: 294 SPLKYTSALTHDAILVIAEAFRYLRRQRVDIS 325
Score = 46 (21.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 20/83 (24%), Positives = 40/83 (48%)
Query: 141 FVRTTQSDQYQMAAI---AEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLA 189
+++ +D+Y+ + +EI H G + ++I D +G NG+ +G+ L
Sbjct: 435 YMQLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVADGKYGARDPETKTWNGM--VGE-LV 491
Query: 190 AKRCRISFKAPLSVEATEDEITD 212
R I+ APL++ +E+ D
Sbjct: 492 YGRADIAV-APLTITLVREEVID 513
>UNIPROTKB|L7MTP7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA]
GeneTree:ENSGT00700000104113 EMBL:AAEX03006734
Ensembl:ENSCAFT00000031003 Uniprot:L7MTP7
Length = 942
Score = 191 (72.3 bits), Expect = 1.9e-20, Sum P(5) = 1.9e-20
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 525 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 584
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 585 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 644
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 645 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 703
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 704 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 762
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 763 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 821
Score = 96 (38.9 bits), Expect = 8.5e-08, Sum P(5) = 8.5e-08
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 477 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 536
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 537 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 596
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 597 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 634
Score = 81 (33.6 bits), Expect = 1.9e-20, Sum P(5) = 1.9e-20
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 224 VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 268
Score = 71 (30.1 bits), Expect = 1.9e-20, Sum P(5) = 1.9e-20
Identities = 34/128 (26%), Positives = 55/128 (42%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSF------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFS 127
++P+L +
Sbjct: 115 RIPVLGLT 122
Score = 70 (29.7 bits), Expect = 1.9e-20, Sum P(5) = 1.9e-20
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 399 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 451
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 452 KKVICTGPNDTSPGSPRHTVPQC 474
Score = 52 (23.4 bits), Expect = 1.9e-20, Sum P(5) = 1.9e-20
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 283 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 332
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 333 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 389
Query: 423 LSVV 426
V+
Sbjct: 390 THVI 393
Score = 43 (20.2 bits), Expect = 8.5e-08, Sum P(5) = 8.5e-08
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 716 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 765
>UNIPROTKB|F6Y5R7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
OMA:VYRSAAM Ensembl:ENSCAFT00000035191 EMBL:AAEX03006734
Uniprot:F6Y5R7
Length = 949
Score = 191 (72.3 bits), Expect = 2.0e-20, Sum P(5) = 2.0e-20
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 532 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 591
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 592 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 651
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 652 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 710
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 711 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 769
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 770 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 828
Score = 96 (38.9 bits), Expect = 8.9e-08, Sum P(5) = 8.9e-08
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 484 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 543
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 544 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 603
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 604 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 641
Score = 81 (33.6 bits), Expect = 2.0e-20, Sum P(5) = 2.0e-20
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 231 VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 275
Score = 71 (30.1 bits), Expect = 2.0e-20, Sum P(5) = 2.0e-20
Identities = 34/128 (26%), Positives = 55/128 (42%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLG 67
L ++F C A+A+ P +VNIGA+LS + + + AV+ N G
Sbjct: 9 LALLFSCSF------ARAACDPKIVNIGAVLSTRKH-----EQMFREAVNQANKRH---G 54
Query: 68 GTKLKLQMQDCNHSGF---LALAEALHLMEGQTVAII-----GPQDAVTSHVVSHVANEL 119
K++L H +AL+ L+ Q AI+ P D T VS+ A
Sbjct: 55 SWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFY 114
Query: 120 QVPLLSFS 127
++P+L +
Sbjct: 115 RIPVLGLT 122
Score = 70 (29.7 bits), Expect = 2.0e-20, Sum P(5) = 2.0e-20
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 406 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 458
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 459 KKVICTGPNDTSPGSPRHTVPQC 481
Score = 52 (23.4 bits), Expect = 2.0e-20, Sum P(5) = 2.0e-20
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 290 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 339
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 340 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 396
Query: 423 LSVV 426
V+
Sbjct: 397 THVI 400
Score = 43 (20.2 bits), Expect = 8.9e-08, Sum P(5) = 8.9e-08
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 723 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 772
>MGI|MGI:95814 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO;IC] [GO:0014054 "positive regulation of
gamma-aminobutyric acid secretion" evidence=IMP] [GO:0015277
"kainate selective glutamate receptor activity"
evidence=ISO;IGI;IDA;IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=IMP] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=ISO] [GO:0032230
"positive regulation of synaptic transmission, GABAergic"
evidence=ISO;IMP] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IPI] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IGI;IMP] [GO:0042391
"regulation of membrane potential" evidence=IDA;IMP] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=ISO;TAS] [GO:0048266 "behavioral
response to pain" evidence=IMP] [GO:0051899 "membrane
depolarization" evidence=IMP] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=ISO;IGI] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IGI;IMP] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95814 GO:GO:0051967
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:X66118
EMBL:U31444 IPI:IPI00122550 PIR:A41053 UniGene:Mm.5134
ProteinModelPortal:Q60934 SMR:Q60934 STRING:Q60934
PhosphoSite:Q60934 PRIDE:Q60934 UCSC:uc007zuw.2 CleanEx:MM_GRIK1
Genevestigator:Q60934 Uniprot:Q60934
Length = 836
Score = 183 (69.5 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 456 GNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 515
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 516 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 575
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 576 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 635
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 636 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 138 (53.6 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 56/251 (22%), Positives = 99/251 (39%)
Query: 17 FVYRITAQASGRPSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQM 75
F+ I Q S P V+ IG + N V +LA K AV +N + T + T L +
Sbjct: 24 FLCYILPQTS--PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDI 81
Query: 76 QDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLS 134
Q N F A A + A+ GP + + V + N L+VP + P++
Sbjct: 82 QRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVD 141
Query: 135 SLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRC 193
+ +++ A+ ++V +Y W+ V +Y D G+ L + + A R
Sbjct: 142 NRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRY 196
Query: 194 RISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVW 253
I K +D LL ++ + ++ + + ++GM+ Y +
Sbjct: 197 NIKIKIRQLPSGNKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHY 255
Query: 254 IATSWLSTALD 264
T+ ALD
Sbjct: 256 FFTTLDLFALD 266
Score = 57 (25.1 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 376 ILQANMTGTAGPARFNSHGDLINPA-YEIINVIGTGYRRIGYWSNYSGLSV 425
I +A G G FN L +II++ G +IG W++ SGL++
Sbjct: 364 IKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNM 414
Score = 43 (20.2 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 26/81 (32%), Positives = 34/81 (41%)
Query: 581 WAFLSPFTPMMWGVT---AIFF-LAVGAVV--------WILEHRLNDEFRGPPKRQVVTI 628
WAF+S P GV IF LA G V+ +I + R N++ K +
Sbjct: 706 WAFMSSRQPSALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNNDIEQKGKSSRLR- 764
Query: 629 FWFSFSTMFFAHKEKTVSALG 649
F+F F H KT S LG
Sbjct: 765 FYFRNKVRF--HGSKTES-LG 782
>UNIPROTKB|F1RU73 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
OMA:MVQQFLQ EMBL:CU210872 EMBL:CU469331 EMBL:CU856192
Ensembl:ENSSSCT00000013819 Uniprot:F1RU73
Length = 854
Score = 149 (57.5 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 55/225 (24%), Positives = 94/225 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 559 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 618
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 619 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 678
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 679 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 738
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
+ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 739 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 783
Score = 116 (45.9 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 44/268 (16%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ HY W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 108 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 165
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 166 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 220
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 221 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 280
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 281 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 334
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + TG R+ GYW+ Y
Sbjct: 335 YGRRTNYTIDVYEMKVTGSRKAGYWNEY 362
Score = 115 (45.5 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 405 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 461
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 462 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 521
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 522 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 553
>UNIPROTKB|F1P0S5 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 OMA:MVQQFLQ EMBL:AADN02013607
EMBL:AADN02013608 IPI:IPI00883216 Ensembl:ENSGALT00000013865
ArrayExpress:F1P0S5 Uniprot:F1P0S5
Length = 804
Score = 149 (57.5 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 55/225 (24%), Positives = 94/225 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 509 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 568
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 569 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 628
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 629 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 688
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
+ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 689 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 733
Score = 116 (45.9 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 51/289 (17%), Positives = 118/289 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ +Y W + + +Y D + G + + A+ + +++ ++ S++ + E +
Sbjct: 58 AILSLLTYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQ-EFRRI 115
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ +R + LG GY ++ + T + V
Sbjct: 116 IEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIVLER-----V 170
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M V + ++ + ++F+ RW L + + P Y +D V ++A A
Sbjct: 171 MHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEA 230
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 231 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 284
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
+G N ++ + +G R+ GYW+ Y P TL P N +SS
Sbjct: 285 YGRRTNYTIDVYEMKASGSRKAGYWNEYERFV---P-TLDQLPSNDTSS 329
Score = 114 (45.2 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 30/131 (22%), Positives = 63/131 (48%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGH---NNPSC---TELVRLITAGVY 539
++G+E G+C+D+ + + + YKL GDG +P +V + G
Sbjct: 355 LEGNERYEGYCVDLASEIAKHV--GIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRA 412
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 413 DIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 472
Query: 599 FLAVGAVVWIL 609
++ V V++++
Sbjct: 473 YIGVSVVLFLV 483
>UNIPROTKB|E2RHU1 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2892
KO:K05199 OMA:MVQQFLQ EMBL:AAEX03026851 EMBL:AAEX03026852
RefSeq:XP_852016.1 ProteinModelPortal:E2RHU1
Ensembl:ENSCAFT00000029477 GeneID:492110 KEGG:cfa:492110
NextBio:20864762 Uniprot:E2RHU1
Length = 894
Score = 149 (57.5 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 55/225 (24%), Positives = 94/225 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 659 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 718
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 719 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 778
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
+ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 779 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 823
Score = 116 (45.9 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 44/268 (16%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ HY W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 205
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 206 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 260
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 261 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 320
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 321 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 374
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + TG R+ GYW+ Y
Sbjct: 375 YGRRTNYTIDVYEMKVTGSRKAGYWNEY 402
Score = 115 (45.5 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 445 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 501
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 502 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 561
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 562 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 593
>UNIPROTKB|E7EPZ0 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792601
ProteinModelPortal:E7EPZ0 SMR:E7EPZ0 Ensembl:ENST00000399909
ArrayExpress:E7EPZ0 Bgee:E7EPZ0 Uniprot:E7EPZ0
Length = 903
Score = 183 (69.5 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 456 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 515
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 516 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 575
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 576 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 635
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 636 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 138 (53.6 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 59/242 (24%), Positives = 94/242 (38%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 573 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 633 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 692
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ AL +G + D YA L ST
Sbjct: 693 FFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQR 748
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 749 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 808
Query: 819 AK 820
K
Sbjct: 809 NK 810
Score = 136 (52.9 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 53/239 (22%), Positives = 94/239 (39%)
Query: 29 PSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLAL 86
P V+ IG + N V +LA K AV +N + T + T L +Q N F A
Sbjct: 34 PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEAS 93
Query: 87 AEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
A + A+ GP + + V + N L+VP + P++ + +++
Sbjct: 94 RRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYP 152
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEA 205
AI ++V +Y W+ V +Y D G+ L + + A R I K
Sbjct: 153 DYAAISRAILDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSG 208
Query: 206 TEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
+D LL ++ + ++ + + ++GM+ Y + T+ ALD
Sbjct: 209 NKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 266
Score = 58 (25.5 bits), Expect = 4.3e-20, Sum P(3) = 4.3e-20
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 376 ILQANMTGTAGPARFNSHGDLINPA-YEIINVIGTGYRRIGYWSNYSGLSV 425
I +A G G FN L +II++ G +IG W++ SGL++
Sbjct: 364 IKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNM 414
>UNIPROTKB|E7EPY9 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790891
ProteinModelPortal:E7EPY9 SMR:E7EPY9 Ensembl:ENST00000399914
ArrayExpress:E7EPY9 Bgee:E7EPY9 Uniprot:E7EPY9
Length = 934
Score = 183 (69.5 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 456 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 515
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 516 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 575
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 576 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 635
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 636 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 154 (59.3 bits), Expect = 6.5e-17, Sum P(3) = 6.5e-17
Identities = 67/295 (22%), Positives = 114/295 (38%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 573 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 633 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 692
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ AL +G + D YA L ST
Sbjct: 693 FFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQR 748
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 749 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 808
Query: 819 AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSR 873
K + L +++ F+ + + +++ ++ D E G SSR
Sbjct: 809 NK-EASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKN--NDIEQKGKSSR 860
Score = 136 (52.9 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 53/239 (22%), Positives = 94/239 (39%)
Query: 29 PSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLAL 86
P V+ IG + N V +LA K AV +N + T + T L +Q N F A
Sbjct: 34 PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEAS 93
Query: 87 AEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
A + A+ GP + + V + N L+VP + P++ + +++
Sbjct: 94 RRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYP 152
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEA 205
AI ++V +Y W+ V +Y D G+ L + + A R I K
Sbjct: 153 DYAAISRAILDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSG 208
Query: 206 TEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
+D LL ++ + ++ + + ++GM+ Y + T+ ALD
Sbjct: 209 NKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 266
Score = 58 (25.5 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 376 ILQANMTGTAGPARFNSHGDLINPA-YEIINVIGTGYRRIGYWSNYSGLSV 425
I +A G G FN L +II++ G +IG W++ SGL++
Sbjct: 364 IKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNM 414
>MGI|MGI:95815 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2 (beta
2)" species:10090 "Mus musculus" [GO:0001662 "behavioral fear
response" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IGI;IMP] [GO:0008066
"glutamate receptor activity" evidence=ISO] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=ISO;IC] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP;IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP]
[GO:0042391 "regulation of membrane potential"
evidence=IGI;IMP;IDA] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043113
"receptor clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IGI]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;TAS] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0046328 "regulation of
JNK cascade" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=ISO;IMP]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IGI] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IGI;IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95815 Pfam:PF01094
GO:GO:0006886 GO:GO:0016020 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0043204
GO:GO:0051402 GO:GO:0045202 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249
GO:GO:0005622 GO:GO:0006874 GO:GO:0019228 GO:GO:0043113
GO:GO:0032839 GO:GO:0046328 GO:GO:0001662 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 eggNOG:NOG316680
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
OrthoDB:EOG41C6VH EMBL:X66117 EMBL:D10054 EMBL:U31443 EMBL:AC113305
IPI:IPI00131566 IPI:IPI00223171 PIR:A43954 PIR:S35792
UniGene:Mm.332838 ProteinModelPortal:P39087 SMR:P39087
IntAct:P39087 STRING:P39087 PhosphoSite:P39087 PaxDb:P39087
PRIDE:P39087 Ensembl:ENSMUST00000079751 Ensembl:ENSMUST00000105484
Ensembl:ENSMUST00000105485 Ensembl:ENSMUST00000105487
GeneTree:ENSGT00590000083056 InParanoid:P39087 Bgee:P39087
Genevestigator:P39087 GermOnline:ENSMUSG00000056073 Uniprot:P39087
Length = 908
Score = 176 (67.0 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 455 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAV 514
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 515 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 574
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 575 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 634
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 144 (55.7 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 573 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 633 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 691
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 692 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 750
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 751 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 810
Score = 133 (51.9 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 9 LMIFYCELFVYRITAQASGRPSVVNIGALLSF--STNVGKVAKLAIKAAVDDVNSDPTTL 66
+ + C L++ + G V+ G + + S +G +LA + AV+ +N + T L
Sbjct: 17 IKVLLCLLWI----GYSQGTTHVLRFGGIFEYVESGPMG-AEELAFRFAVNTINRNRTLL 71
Query: 67 GGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLS 125
T L Q N + F A +A + AI GP + +++ V + N L VP +
Sbjct: 72 PNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQ 131
Query: 126 FSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALG 185
+ +S + ++V AI ++V + W+ V +Y DD G+ L
Sbjct: 132 -TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQ 186
Query: 186 DTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYL 244
+ + A R + K T+D LL ++ + ++ + + A +
Sbjct: 187 ELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAM 245
Query: 245 GMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPD--SVLKRKFISRWRN 302
GM+ Y +I T+ ALD S V ++ G L T S++++ + R +
Sbjct: 246 GMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTENTQVSSIIEKWSMERLQA 303
Query: 303 --LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
D+ +G++ +A YD V +++ A+ F
Sbjct: 304 PPKPDSGLLDGFMTTDAA--LMYDAVHVVSVAVQQF 337
Score = 67 (28.6 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMT- 414
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 415 -ESQKGKPANITDSLSNRSL 433
>RGD|2733 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA;ISO;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0030424 "axon"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0032839
"dendrite cytoplasm" evidence=IDA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;TAS] [GO:0035249
"synaptic transmission, glutamatergic" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043113 "receptor clustering" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=ISO] [GO:0043525 "positive regulation of neuron
apoptotic process" evidence=IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0046328
"regulation of JNK cascade" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048172
"regulation of short-term neuronal synaptic plasticity" evidence=ISO]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=IMP]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0051402 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708 PIR:S19098
RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y PDB:1S9T
PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR PDB:2XXT
PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F PDB:3G3G
PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H PDB:3QLT
PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T PDBsum:1SD3
PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C PDBsum:2XXR
PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW PDBsum:2XXX
PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H PDBsum:3G3I
PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H PDBsum:3QLT
PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260 SMR:P42260
DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260 PRIDE:P42260
GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733 InParanoid:P42260
BindingDB:P42260 ChEMBL:CHEMBL3607 EvolutionaryTrace:P42260
NextBio:610770 ArrayExpress:P42260 Genevestigator:P42260
GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 176 (67.0 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 455 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAV 514
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 515 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 574
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 575 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 634
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 144 (55.7 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 573 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 633 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 691
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 692 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 750
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 751 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 810
Score = 133 (51.9 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 9 LMIFYCELFVYRITAQASGRPSVVNIGALLSF--STNVGKVAKLAIKAAVDDVNSDPTTL 66
+ + C L++ + G V+ G + + S +G +LA + AV+ +N + T L
Sbjct: 17 IKVLLCLLWI----GYSQGTTHVLRFGGIFEYVESGPMG-AEELAFRFAVNTINRNRTLL 71
Query: 67 GGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLS 125
T L Q N + F A +A + AI GP + +++ V + N L VP +
Sbjct: 72 PNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQ 131
Query: 126 FSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALG 185
+ +S + ++V AI ++V + W+ V +Y DD G+ L
Sbjct: 132 -TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQ 186
Query: 186 DTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYL 244
+ + A R + K T+D LL ++ + ++ + + A +
Sbjct: 187 ELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAM 245
Query: 245 GMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPD--SVLKRKFISRWRN 302
GM+ Y +I T+ ALD S V ++ G L T S++++ + R +
Sbjct: 246 GMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTENTQVSSIIEKWSMERLQA 303
Query: 303 --LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
D+ +G++ +A YD V +++ A+ F
Sbjct: 304 PPKPDSGLLDGFMTTDAA--LMYDAVHVVSVAVQQF 337
Score = 67 (28.6 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 414
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 415 -ESQKGKPANITDSLSNRSL 433
>UNIPROTKB|P42260 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228
GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708
PIR:S19098 RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y
PDB:1S9T PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR
PDB:2XXT PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F
PDB:3G3G PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H
PDB:3QLT PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T
PDBsum:1SD3 PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C
PDBsum:2XXR PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW
PDBsum:2XXX PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H
PDBsum:3G3I PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H
PDBsum:3QLT PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260
SMR:P42260 DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260
PRIDE:P42260 GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733
InParanoid:P42260 BindingDB:P42260 ChEMBL:CHEMBL3607
EvolutionaryTrace:P42260 NextBio:610770 ArrayExpress:P42260
Genevestigator:P42260 GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 176 (67.0 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 455 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAV 514
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 515 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 574
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 575 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 634
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 144 (55.7 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 573 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 633 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 691
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 692 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 750
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 751 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 810
Score = 133 (51.9 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 9 LMIFYCELFVYRITAQASGRPSVVNIGALLSF--STNVGKVAKLAIKAAVDDVNSDPTTL 66
+ + C L++ + G V+ G + + S +G +LA + AV+ +N + T L
Sbjct: 17 IKVLLCLLWI----GYSQGTTHVLRFGGIFEYVESGPMG-AEELAFRFAVNTINRNRTLL 71
Query: 67 GGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLS 125
T L Q N + F A +A + AI GP + +++ V + N L VP +
Sbjct: 72 PNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQ 131
Query: 126 FSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALG 185
+ +S + ++V AI ++V + W+ V +Y DD G+ L
Sbjct: 132 -TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQ 186
Query: 186 DTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYL 244
+ + A R + K T+D LL ++ + ++ + + A +
Sbjct: 187 ELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAM 245
Query: 245 GMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPD--SVLKRKFISRWRN 302
GM+ Y +I T+ ALD S V ++ G L T S++++ + R +
Sbjct: 246 GMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTENTQVSSIIEKWSMERLQA 303
Query: 303 --LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
D+ +G++ +A YD V +++ A+ F
Sbjct: 304 PPKPDSGLLDGFMTTDAA--LMYDAVHVVSVAVQQF 337
Score = 67 (28.6 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 414
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 415 -ESQKGKPANITDSLSNRSL 433
>UNIPROTKB|B4MU83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7260 "Drosophila willistoni" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH EMBL:CH963852
RefSeq:XP_002064686.1 ProteinModelPortal:B4MU83 STRING:B4MU83
EnsemblMetazoa:FBtr0254355 GeneID:6641663 KEGG:dwi:Dwil_GK23704
FlyBase:FBgn0225666 InParanoid:B4MU83 Uniprot:B4MU83
Length = 982
Score = 176 (67.0 bits), Expect = 6.6e-20, Sum P(3) = 6.6e-20
Identities = 60/285 (21%), Positives = 124/285 (43%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 513 DMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSV 572
Query: 600 LAVGAVVWILEH-------RLNDEFRGPPKR-QVVTIFWFSFSTMFFAH-KEKTVSALG- 649
V V+++L+ +L+ K + + WF++ + + E T +
Sbjct: 573 HVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSA 632
Query: 650 RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS--LRSS--NYPIGYQVNSFA 705
R +SYTA+L + L +++ + + GI+ LR++ N S
Sbjct: 633 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSV 692
Query: 706 RNYLVDELNIDES-RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSI 764
Y ++ + R + N+ A++D KG + A + D + E S CE
Sbjct: 693 DMYFRRQVELSNMYRTMEANNYATAEHAIQD-VKKGKLMAFIWDSSRLEYEASKDCELVT 751
Query: 765 VGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWL 809
G++F ++G+G + SP ++ AIL+ E+G ++++ +W+
Sbjct: 752 AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 796
Score = 111 (44.1 bits), Expect = 6.6e-20, Sum P(3) = 6.6e-20
Identities = 36/174 (20%), Positives = 74/174 (42%)
Query: 92 LMEGQTVAIIGPQDAVTSHV----VSHVANELQVPLLSFSATDPTLSSLQFPY-FVRTTQ 146
L+E + A++ + + + VS+ + +P++ S+ D S F+RT
Sbjct: 85 LIEKRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVP 144
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLS-VEA 205
+Q E++ H+ + +VI I+ D GR + T + +A + +
Sbjct: 145 PYYHQADVWLEMLSHFSYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVEMIVE 204
Query: 206 TEDEITDL---LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIAT 256
E ++T L + +SR+ +++ ++F A+ M G+VWI T
Sbjct: 205 FEPKLTSFSEHLTYMKTAQSRVYLMYASTEDAQIIFRDARDHNMTQEGHVWIVT 258
Score = 101 (40.6 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 493 SGFCIDVFTAAINLLPYAVPYKLIPFGD-GH----NNPSCT---ELVRLITAGVYDAA-- 542
SG+CID+ + + L P G GH NN T E LI V + A
Sbjct: 455 SGYCIDLLIELAKRINFTYDLALSPDGQFGHYILRNNTGATLRKEWTGLIGQLVNERADM 514
Query: 543 -VGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLA 601
V + I R + +F++P+ G+ ++ S +FL PF+ +W + +
Sbjct: 515 IVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVHV 574
Query: 602 VGAVVWILE 610
V V+++L+
Sbjct: 575 VALVLYLLD 583
Score = 90 (36.7 bits), Expect = 6.6e-20, Sum P(3) = 6.6e-20
Identities = 44/171 (25%), Positives = 70/171 (40%)
Query: 308 TPNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
TP G +GL +A+ + D+V++LA AI KD G DS
Sbjct: 267 TPEGVLGLQLEHAHSDKGHIRDSVYVLASAIKEMISNETIAEAPKDC------G----DS 316
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI-GYWSNYS 421
+ G L + N+TG G F+ +GD I Y++IN+ + + G +S Y
Sbjct: 317 AVNWESGKRLFQYLKTRNITGETGQVAFDDNGDRIYAGYDVINIRENQKQHVVGKFS-YD 375
Query: 422 GLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRI 472
+ + R N +IW G+ +KP G + P HL++
Sbjct: 376 NM----------RAKMRMKINDS--EIIWAGKQKRKPEGIMIPT---HLKL 411
>UNIPROTKB|E1BGZ0 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:MVQQFLQ EMBL:DAAA02067291 EMBL:DAAA02067292
EMBL:DAAA02067293 EMBL:DAAA02067294 IPI:IPI00692662
Ensembl:ENSBTAT00000015717 BindingDB:E1BGZ0 Uniprot:E1BGZ0
Length = 754
Score = 143 (55.4 bits), Expect = 7.1e-20, Sum P(3) = 7.1e-20
Identities = 52/211 (24%), Positives = 88/211 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 459 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 518
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 519 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 578
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 579 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 638
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQG 818
+ A+LKL+E G L ++ +KW + C S G
Sbjct: 639 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 669
Score = 116 (45.9 bits), Expect = 7.1e-20, Sum P(3) = 7.1e-20
Identities = 44/268 (16%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ HY W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 8 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 65
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 66 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 120
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 121 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 180
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 181 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 234
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + TG R+ GYW+ Y
Sbjct: 235 YGRRTNYTIDVYEMKVTGSRKAGYWNEY 262
Score = 115 (45.5 bits), Expect = 7.1e-20, Sum P(3) = 7.1e-20
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 305 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 361
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 362 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 421
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 422 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 453
>UNIPROTKB|Q13002 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001662 "behavioral
fear response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IMP] [GO:0050804 "regulation
of synaptic transmission" evidence=IDA] [GO:0050806 "positive
regulation of synaptic transmission" evidence=IMP] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=NAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0005887 GO:GO:0051967 GO:GO:0007268 EMBL:CH471051
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 DrugBank:DB00142 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
Orphanet:88616 GO:GO:0050806 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:U16126
EMBL:AJ252246 EMBL:AJ301608 EMBL:AJ301609 EMBL:AJ301610
EMBL:HM149335 EMBL:HM149336 EMBL:HM149337 EMBL:HM149338
EMBL:HM149339 EMBL:AL109919 EMBL:AP002528 EMBL:AP002529
EMBL:AP002530 IPI:IPI00011396 IPI:IPI00396613 IPI:IPI00642591
IPI:IPI00746275 IPI:IPI00815931 PIR:A54260 RefSeq:NP_001159719.1
RefSeq:NP_068775.1 RefSeq:NP_786944.1 UniGene:Hs.98262 PDB:3QXM
PDBsum:3QXM ProteinModelPortal:Q13002 SMR:Q13002 IntAct:Q13002
STRING:Q13002 PhosphoSite:Q13002 DMDM:2492627 PaxDb:Q13002
PRIDE:Q13002 DNASU:2898 Ensembl:ENST00000318991
Ensembl:ENST00000369137 Ensembl:ENST00000369138
Ensembl:ENST00000413795 Ensembl:ENST00000421544 GeneID:2898
KEGG:hsa:2898 UCSC:uc003pqn.3 UCSC:uc003pqo.4 UCSC:uc010kcw.3
CTD:2898 GeneCards:GC06P101846 H-InvDB:HIX0006094 HGNC:HGNC:4580
HPA:CAB022463 HPA:HPA014395 HPA:HPA014623 MIM:138244 MIM:611092
neXtProt:NX_Q13002 PharmGKB:PA164741600 InParanoid:Q13002 KO:K05202
OMA:VNGQWNG OrthoDB:EOG41C6VH PhylomeDB:Q13002 BindingDB:Q13002
ChEMBL:CHEMBL3683 GenomeRNAi:2898 NextBio:11469 ArrayExpress:Q13002
Bgee:Q13002 CleanEx:HS_GRIK2 Genevestigator:Q13002
GermOnline:ENSG00000164418 Uniprot:Q13002
Length = 908
Score = 176 (67.0 bits), Expect = 7.8e-20, Sum P(3) = 7.8e-20
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 455 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAV 514
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 515 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 574
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 575 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 634
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 144 (55.7 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 573 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 633 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 691
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 692 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 750
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 751 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 810
Score = 132 (51.5 bits), Expect = 7.8e-20, Sum P(3) = 7.8e-20
Identities = 71/320 (22%), Positives = 133/320 (41%)
Query: 25 ASGRPSVVNIGALLSF--STNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
+ G V+ G + + S +G +LA + AV+ +N + T L T L Q N +
Sbjct: 29 SQGTTHVLRFGGIFEYVESGPMG-AEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYD 87
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + AI GP + +++ V + N L VP + + +S + ++
Sbjct: 88 SFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFY 146
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAP 200
V AI ++V + W+ V +Y DD G+ L + + A R + K
Sbjct: 147 VSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIKAPSRYNLRLKIR 202
Query: 201 LSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLS 260
T+D LL ++ + ++ + + A +GM+ Y +I T+
Sbjct: 203 QLPADTKDA-KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDL 261
Query: 261 TALDTNSPFPSDVMDDIQGVLTLRTYTPD--SVLKRKFISRWRN--LTDAKTPNGYIGLN 316
ALD S V ++ G L T S++++ + R + D+ +G++ +
Sbjct: 262 FALDVEPYRYSGV--NMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 317 AYGFYAYDTVWLLARAINSF 336
A YD V +++ A+ F
Sbjct: 320 AA--LMYDAVHVVSVAVQQF 337
Score = 67 (28.6 bits), Expect = 7.8e-20, Sum P(3) = 7.8e-20
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 414
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 415 -ESQKGKPANITDSLSNRSL 433
>ZFIN|ZDB-GENE-070821-5 [details] [associations]
symbol:grik4 "glutamate receptor, ionotropic, kainate
4" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:BX571886 EMBL:BX572079 EMBL:CR626883
EMBL:CU104717 IPI:IPI00505029 Ensembl:ENSDART00000035812
Uniprot:E7F1P4
Length = 965
Score = 185 (70.2 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 82/363 (22%), Positives = 145/363 (39%)
Query: 524 NPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVR-KLDSNAWA 582
N + T +V + + D AV + I R K+ DF++P++ G+ ++ V ++
Sbjct: 479 NGTWTGMVGELISRKADLAVAALTITAEREKVIDFSKPFMTLGISIMYRVHIGRRPGYFS 538
Query: 583 FLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGP-P--K-RQVVTIFWFSFSTMF- 637
FL PF+P +W + +LAV V++++ E+ P P K R + I +S F
Sbjct: 539 FLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYNPHPCLKGRCSLLINQYSLGNSFW 598
Query: 638 -----FAHKEKTVS--ALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDS 689
F + T++ AL R SSYTA+L + LTVQ++ PI+ +D
Sbjct: 599 FPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDD 658
Query: 690 LRSSN-YPIGYQVNSFARNYLVDELNIDESRL---VPLNSPEEYAKALKDGPHK--GGVA 743
L G + + R+ + P + K+ ++G +
Sbjct: 659 LADQTAIEYGTMHGGSTMTFFQNSRYQTYQRMWNFMYSKQPSVFVKSTEEGIARVLNSNY 718
Query: 744 AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQR 803
A + + E + C + +G + G+G P S + AIL+L E L+
Sbjct: 719 AYLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPLGSVYRDEFDLAILRLQEENRLEI 778
Query: 804 IHDKWLLRSACSSQGAKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPG 863
+ KW C + L +++ F+ +++ V RH PG
Sbjct: 779 LKRKWWDGGKCPKEEDHR-AKGLGMENIGGIFVVLVCGLLVAIFMAVLEFVWML-RHTPG 836
Query: 864 DTE 866
TE
Sbjct: 837 -TE 838
Score = 143 (55.4 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 65/252 (25%), Positives = 111/252 (44%)
Query: 16 LFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVN--SDPTTLGGTKLKL 73
LF+ A+ P I A+L + +LAI A D +N S+ +T G KL++
Sbjct: 9 LFLAMWVRNATSGPLSFRIAAILDDPMECSRGERLAITLAKDSINRSSNRSTTG--KLEV 66
Query: 74 QMQDCNHSGFLALAEAL-HLMEGQTVAIIGPQDAVTSH-VVSHVANELQVPLLSFSATDP 131
+ + E + +M VA++GP + S+ ++S++ E +VP + + D
Sbjct: 67 DIFELLRDSEYETGETMCQIMSKGVVAVLGPSASPASNSIISNICGEKEVPYVKVAPED- 125
Query: 132 TLSSLQFPYF----VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDT 187
+ +QFP F +R T +D MA +A ++ + I D L
Sbjct: 126 -ILKVQFPRFTTLDLRPTNTD-ISMA-VAGLLTFFNSSTSCLICAQAD------CLLNLE 176
Query: 188 LAAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLG 245
+ ++ IS K LSV +D + T LL ++ ++ I+V + V+ A LG
Sbjct: 177 VLLRQFLIS-KETLSVRMLDDSQDPTPLLKEIRDDKTATIIVDANATMSHVILERASELG 235
Query: 246 MLGTGYVWIATS 257
ML Y +I TS
Sbjct: 236 MLSVYYTYILTS 247
Score = 137 (53.3 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 36/141 (25%), Positives = 71/141 (50%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG-HNNPSC----TELVRLITAGVYD 540
++G++ GFC+D+ ++L + +L+ GDG + P T +V + + D
Sbjct: 438 LEGNDRYEGFCVDMLKELADILKFKYRIRLV--GDGVYGVPGANGTWTGMVGELISRKAD 495
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGLVVVAPVR-KLDSNAWAFLSPFTPMMWGVTAIFF 599
AV + I R K+ DF++P++ G+ ++ V ++FL PF+P +W + +
Sbjct: 496 LAVAALTITAEREKVIDFSKPFMTLGISIMYRVHIGRRPGYFSFLDPFSPGVWLFMLLAY 555
Query: 600 LAVGAVVWILEHRLNDEFRGP 620
LAV V++++ E+ P
Sbjct: 556 LAVSCVLFLVARLTPYEWYNP 576
Score = 117 (46.2 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 61/236 (25%), Positives = 95/236 (40%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ ++ I+V + V+ A LGML Y +I
Sbjct: 186 KETLSVRMLDDSQDPTPLLKEIRDDKTATIIVDANATMSHVILERASELGMLSVYYTYIL 245
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTL-RTYT--PDSVLKRKFISR-WRNLTDAKTPNG 311
TS + L + +D +I G RT+ D VL ++R W+ D P
Sbjct: 246 TSLEFSLLRLDDL--ADQRVNIVGFSVFNRTHPFFQDFVLS---LNRSWQENCD-HAP-- 297
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
+ G +D V + A+ ++ + Q L S +I+ G
Sbjct: 298 FAGTPLSSALLFDAVHTVVAAVQEL---------NRSQNVGATQ--LSCKSSKIWEHGTS 346
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
L + + + G G FNS G N A I+ G R+IG W + GLS+ R
Sbjct: 347 LMNYLRMVELEGLTGHIEFNSKGQRSNYALRIMQNSRDGLRQIGQWHSEQGLSMER 402
Score = 39 (18.8 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 20/86 (23%), Positives = 34/86 (39%)
Query: 852 QIVHQFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEM 911
Q ++ + G T + +SR Q +F+ K+ V +S + R
Sbjct: 662 QTAIEYGTMHGGSTMTFFQNSRYQTYQRMWNFMYSKQPSVFVKSTEEGIARV-------- 713
Query: 912 SSCNSNRKHIELSSNLSLDSDTRNCN 937
NSN ++ L S ++ RNCN
Sbjct: 714 --LNSNYAYL-LESTMNEYYRQRNCN 736
>ZFIN|ZDB-GENE-020125-1 [details] [associations]
symbol:gria1a "glutamate receptor, ionotropic, AMPA
1a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05197 EMBL:AF525741
IPI:IPI00512681 RefSeq:NP_991161.1 UniGene:Dr.88082
ProteinModelPortal:Q71E65 SMR:Q71E65 GeneID:798689 KEGG:dre:798689
CTD:798689 InParanoid:Q71E65 NextBio:20933517 Uniprot:Q71E65
Length = 914
Score = 148 (57.2 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 46/165 (27%), Positives = 75/165 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVNSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y S + ++ + E
Sbjct: 647 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLDAGSTKEFFRRSKIAVFEKMWS 705
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + K +G KG A +++ + C+ VG G+
Sbjct: 706 YMKSADPSVFVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 765
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ SPL ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 766 GIATPKGSPLRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 810
Score = 102 (41.0 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 52/268 (19%), Positives = 105/268 (39%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEA-TEDEITD 212
A+ +++HY W + + +Y D G + + + DT A ++ ++VE TE
Sbjct: 131 ALVGVIEHYRWSKFVYMY-SSDSGLSVLQKVLDTAAEHNWLVT---SVNVETMTEASFLK 186
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
+ + + I++ R + LG Y +I + +D +
Sbjct: 187 VFQDLDKKKEGQIIIDCELERLTSILKKIIELGKNVKSYHYILANLGFLDIDLTEFKKGE 246
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLT--DAKTPNGYIGLNAYGFYAYDTVWLLA 330
++ G L Y +V + + +W DAK P L G YD V +++
Sbjct: 247 A--NVTG-FQLVNYADPNVSRT--VQQWMEFDNKDAKVPKRR--LKYTGALTYDGVKVMS 299
Query: 331 RAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARF 390
A + +Q + S+ G + + G ++ ++ Q + G G +F
Sbjct: 300 TAFQNLRRQ--RIDISRRGNA----GECLANPPAPWGQGIDIQRALQQVRIEGLTGHIQF 353
Query: 391 NSHGDLINPAYEIINVIGTGYRRIGYWS 418
N G N + ++ + TG +++GYW+
Sbjct: 354 NEKGRRTNYSISVMELRPTGPKKVGYWN 381
Score = 95 (38.5 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 25/127 (19%), Positives = 57/127 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSC---TELVRLITAGVYDAAV 543
G++ G+C+++ + Y K++ G G + +V + G D AV
Sbjct: 429 GNDKYEGYCVELAAEIAKHVGYHYILKIVADGKYGARDAETMMWNGMVGELVYGKADVAV 488
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+ I R ++ DF++P++ G+ +++ K ++FL P +W ++ V
Sbjct: 489 APLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGV 548
Query: 603 GAVVWIL 609
V++++
Sbjct: 549 SVVLFLV 555
Score = 73 (30.8 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 36/149 (24%), Positives = 61/149 (40%)
Query: 26 SGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLA 85
S PS +NIG L ++ +V + A+ D P ++ M +S +
Sbjct: 19 SSFPSNINIGGLFPTESHEYEVFRFALSHHQDIPKLVP--------QVDMVKLGNSFSMT 70
Query: 86 LAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTT 145
A +G AIIG D T +++ L V ++ S P +S QF +R
Sbjct: 71 YAFCSQFSKG-VYAIIGVYDRKTVNMLMSFCGALHVCFVTPSF--PMENSNQFVIQLRPE 127
Query: 146 QSDQYQMAAIAEIVDHYGWREVIAIYVDD 174
D A+ +++HY W + + +Y D
Sbjct: 128 LQD-----ALVGVIEHYRWSKFVYMYSSD 151
Score = 56 (24.8 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 16/78 (20%), Positives = 36/78 (46%)
Query: 140 YFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCR 194
+F + + Y + AEI H G+ ++ I D +G R+ + + + + +
Sbjct: 426 HFTGNDKYEGYCVELAAEIAKHVGYHYILKIVADGKYGARDAETMMWNGMVGELVYGKAD 485
Query: 195 ISFKAPLSVEATEDEITD 212
++ APL++ +E+ D
Sbjct: 486 VAV-APLTITLVREEVID 502
>ZFIN|ZDB-GENE-020125-7 [details] [associations]
symbol:gria4a "glutamate receptor, ionotropic, AMPA
4a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-7 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05200 EMBL:AF525747
IPI:IPI01016706 RefSeq:NP_999971.1 UniGene:Dr.89716
ProteinModelPortal:Q71E59 SMR:Q71E59 GeneID:407735 KEGG:dre:407735
CTD:407735 NextBio:20818588 Uniprot:Q71E59
Length = 898
Score = 141 (54.7 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 52/206 (25%), Positives = 85/206 (41%)
Query: 619 GPPKRQ------VVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASL 671
GPP Q + WFS + T +L GR SSYTA+L
Sbjct: 578 GPPSDQPPNEFGIFNSLWFSLGAFMQQGCDFTPRSLSGRIVGGVWWFFTLIIISSYTANL 637
Query: 672 TSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PE 727
+ LTV+++ SPI+ + L + + G + + + ++ + E + S P
Sbjct: 638 AAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPT 697
Query: 728 EYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDS 782
+ K +G KG A +++ C+ VG G+G A P+ S
Sbjct: 698 VFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGS 757
Query: 783 PLAVDISTAILKLSENGDLQRIHDKW 808
L ++ A+LKLSE G L ++ +KW
Sbjct: 758 QLGTPVNLAVLKLSEAGVLDKLKNKW 783
Score = 127 (49.8 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 61/311 (19%), Positives = 116/311 (37%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + A+ + ++S + VE D
Sbjct: 136 ALLSLLDHYDWSRFVFLY-DTDRGYAVLQAIMEKAGQNGWQVS---AICVENFNDASYRR 191
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL + + + V+ R + +G GY +I + +
Sbjct: 192 LLEDLDRRQEKKFVIDLEAERLQNILEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 251
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G L ++ V+K + RW L + P YD V ++A A
Sbjct: 252 A--NVTG-FQLVDFSKPMVIK--LMQRWNKLDQREYPGSESPPRYTSSLTYDGVLVMAEA 306
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+ +Q + S+ D + +N G + ++ Q + G G +F+
Sbjct: 307 FRNLRRQ--KIDISRRGNAGDCLANPAAP----WNQGIDMERTLKQVRIQGLTGNIQFDH 360
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQR--LYSVIW 450
+G +N ++ + G R+IGYW++ L +V+ E N S+ R + + I
Sbjct: 361 YGRRVNYTMDVFELKSNGPRKIGYWNDLDKLVLVQNELSMG---NDSAMENRTVIVTTIM 417
Query: 451 PGQTTQKPRGW 461
G + W
Sbjct: 418 EGPYVMLKKNW 428
Score = 106 (42.4 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 37/169 (21%), Positives = 76/169 (44%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGH---NNPSC---TELVRLITAGVYD 540
+G+E G+C+D+ + + + YK+ DG +P +V + G +
Sbjct: 432 EGNEQFEGYCVDLASEVAKHI--GIKYKISIVLDGKYGARDPETKIWNGMVGELVYGKAE 489
Query: 541 AAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
AV +AI R ++ DF++P++ G+ +++ +K ++FL P +W +
Sbjct: 490 IAVAPLAITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAY 549
Query: 600 LAVGAVVWILE-------HRLNDE--FRGPPKRQVVTIFWFSFSTMFFA 639
+ V V++++ H E GPP Q F F++++F+
Sbjct: 550 IGVSVVLFLVSRFSPYEWHTEEPEEGSDGPPSDQPPNEFGI-FNSLWFS 597
Score = 49 (22.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 146 QSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISF 197
Q + Y + +E+ H G + I+I +D +G NG+ +G+ + K I+
Sbjct: 436 QFEGYCVDLASEVAKHIGIKYKISIVLDGKYGARDPETKIWNGM--VGELVYGK-AEIAV 492
Query: 198 KAPLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 493 -APLAITLVREEVID 506
>UNIPROTKB|H7BYG7 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 ProteinModelPortal:H7BYG7
SMR:H7BYG7 Ensembl:ENST00000389124 Bgee:H7BYG7 Uniprot:H7BYG7
Length = 871
Score = 183 (69.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 471 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 530
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 531 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 590
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 591 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 650
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 651 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Score = 141 (54.7 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 87/420 (20%), Positives = 167/420 (39%)
Query: 29 PSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLAL 86
P V+ IG + N V +LA K AV +N + T + T L +Q N F A
Sbjct: 34 PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEAS 93
Query: 87 AEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
A + A+ GP + + V + N L+VP + P++ + +++
Sbjct: 94 RRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYP 152
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEA 205
AI ++V +Y W+ V +Y D G+ L + + A R I K
Sbjct: 153 DYAAISRAILDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSG 208
Query: 206 TEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT 265
+D LL ++ + ++ + + ++GM+ Y + T+ ALD
Sbjct: 209 NKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDL 267
Query: 266 NSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKFISRWRNLTDAKTPNGYIG--LNAYGFY 321
S V ++ G L P S++++ + R + + G + +
Sbjct: 268 ELYRYSGV--NMTGFRLLNIDNPHVSSIIEKWSMERLQ--APPRPETGLLDGMMTTEAAL 323
Query: 322 AYDTVWLLA----RA----INSF-------FKQGGN-LSFSKDSRLSDIQGHLRLDSLRI 365
YD V+++A RA ++S ++ G ++ K++R + GH+ +
Sbjct: 324 MYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKT-- 381
Query: 366 FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
NG L +D L G + + G++ Y++ +++IG W++ SGL++
Sbjct: 382 -NG--LRKDFDLDIISLKEEGTEK--AAGEVSKHLYKV-------WKKIGIWNSNSGLNM 429
Score = 138 (53.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 59/242 (24%), Positives = 94/242 (38%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 588 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 647
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 648 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 707
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ AL +G + D YA L ST
Sbjct: 708 FFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQR 763
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 764 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 823
Query: 819 AK 820
K
Sbjct: 824 NK 825
>RGD|2732 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=IDA] [GO:0022843 "voltage-gated cation
channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=ISO] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=IDA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=ISO;IDA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042391 "regulation of membrane
potential" evidence=ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043235 "receptor
complex" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal synaptic
plasticity" evidence=IDA] [GO:0048266 "behavioral response to pain"
evidence=ISO] [GO:0051899 "membrane depolarization" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560
EMBL:M83561 EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402
IPI:IPI00569872 IPI:IPI00951061 IPI:IPI00952320 PIR:S19808
RefSeq:NP_001104584.1 RefSeq:NP_001104587.1 RefSeq:NP_058937.1
UniGene:Rn.10449 PDB:1TXF PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35
PDB:2F36 PDB:2OJT PDB:2PBW PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4
PDB:2WKY PDB:3C31 PDB:3C32 PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36
PDB:3GBA PDB:3GBB PDB:3S2V PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO
PDBsum:1YCJ PDBsum:2F34 PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT
PDBsum:2PBW PDBsum:2QS1 PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4
PDBsum:2WKY PDBsum:3C31 PDBsum:3C32 PDBsum:3C33 PDBsum:3C34
PDBsum:3C35 PDBsum:3C36 PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V
PDBsum:4DLD PDBsum:4E0X ProteinModelPortal:P22756 SMR:P22756
DIP:DIP-29257N STRING:P22756 TCDB:1.A.10.1.5 PhosphoSite:P22756
PRIDE:P22756 GeneID:29559 KEGG:rno:29559 UCSC:RGD:2732
InParanoid:P22756 BindingDB:P22756 ChEMBL:CHEMBL2919
EvolutionaryTrace:P22756 NextBio:609606 ArrayExpress:P22756
Genevestigator:P22756 GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 177 (67.4 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 55/219 (25%), Positives = 97/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ +C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 471 GNDRFEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 530
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 531 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 590
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 591 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 650
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 651 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Score = 158 (60.7 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 63/291 (21%), Positives = 114/291 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 588 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 647
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 648 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 707
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 708 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 767
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K +
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK-E 826
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSR 873
L +++ F+ + + +++ ++ D E G SSR
Sbjct: 827 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSRKN--NDVEQKGKSSR 875
Score = 148 (57.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 90/426 (21%), Positives = 168/426 (39%)
Query: 17 FVYRITAQASGRPSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQM 75
F+ I Q S P V+ IG + N V +LA K AV +N + T + T L +
Sbjct: 24 FLCYILPQTS--PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDI 81
Query: 76 QDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLS 134
Q N F A A + A+ GP + + V + N L+VP + P++
Sbjct: 82 QRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVD 141
Query: 135 SLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRC 193
S +++ A+ ++V +Y W+ V +Y D G+ L + + A R
Sbjct: 142 SRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRY 196
Query: 194 RISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVW 253
I K A +D LL ++ ++ ++ + + ++GM+ Y +
Sbjct: 197 NIKIKIRQLPPANKDA-KPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHY 255
Query: 254 IATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKFISRWRNLTDAKTPNG 311
T+ ALD S V ++ G L P S++++ + R + + G
Sbjct: 256 FFTTLDLFALDLELYRYSGV--NMTGFRKLNIDNPHVSSIIEKWSMERLQ--APPRPETG 311
Query: 312 YIG--LNAYGFYAYDTVWLLARAIN-------SFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
+ + YD V+++A A + S + + + R ++ R D
Sbjct: 312 LLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPCALGPRFMNLIKEARWDG 371
Query: 363 L--RI-FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSN 419
L RI FN + LR ++ + G++ Y++ +++IG W++
Sbjct: 372 LTGRITFNKTDGLRKDF-DLDIISLKEEGTEKASGEVSKHLYKV-------WKKIGIWNS 423
Query: 420 YSGLSV 425
SGL++
Sbjct: 424 NSGLNM 429
>UNIPROTKB|P22756 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967
GO:GO:0007268 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0030425 GO:GO:0048266 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0032230 GO:GO:0060080
GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828 GO:GO:0048172
GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560 EMBL:M83561
EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402 IPI:IPI00569872
IPI:IPI00951061 IPI:IPI00952320 PIR:S19808 RefSeq:NP_001104584.1
RefSeq:NP_001104587.1 RefSeq:NP_058937.1 UniGene:Rn.10449 PDB:1TXF
PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35 PDB:2F36 PDB:2OJT PDB:2PBW
PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4 PDB:2WKY PDB:3C31 PDB:3C32
PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36 PDB:3GBA PDB:3GBB PDB:3S2V
PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO PDBsum:1YCJ PDBsum:2F34
PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT PDBsum:2PBW PDBsum:2QS1
PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4 PDBsum:2WKY PDBsum:3C31
PDBsum:3C32 PDBsum:3C33 PDBsum:3C34 PDBsum:3C35 PDBsum:3C36
PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V PDBsum:4DLD PDBsum:4E0X
ProteinModelPortal:P22756 SMR:P22756 DIP:DIP-29257N STRING:P22756
TCDB:1.A.10.1.5 PhosphoSite:P22756 PRIDE:P22756 GeneID:29559
KEGG:rno:29559 UCSC:RGD:2732 InParanoid:P22756 BindingDB:P22756
ChEMBL:CHEMBL2919 EvolutionaryTrace:P22756 NextBio:609606
ArrayExpress:P22756 Genevestigator:P22756
GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 177 (67.4 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 55/219 (25%), Positives = 97/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ +C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 471 GNDRFEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 530
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 531 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 590
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 591 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 650
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 651 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Score = 158 (60.7 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 63/291 (21%), Positives = 114/291 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 588 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 647
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 648 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 707
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 708 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 767
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K +
Sbjct: 768 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK-E 826
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSR 873
L +++ F+ + + +++ ++ D E G SSR
Sbjct: 827 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSRKN--NDVEQKGKSSR 875
Score = 148 (57.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 90/426 (21%), Positives = 168/426 (39%)
Query: 17 FVYRITAQASGRPSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQM 75
F+ I Q S P V+ IG + N V +LA K AV +N + T + T L +
Sbjct: 24 FLCYILPQTS--PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDI 81
Query: 76 QDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLS 134
Q N F A A + A+ GP + + V + N L+VP + P++
Sbjct: 82 QRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVD 141
Query: 135 SLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRC 193
S +++ A+ ++V +Y W+ V +Y D G+ L + + A R
Sbjct: 142 SRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRY 196
Query: 194 RISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVW 253
I K A +D LL ++ ++ ++ + + ++GM+ Y +
Sbjct: 197 NIKIKIRQLPPANKDA-KPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHY 255
Query: 254 IATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKFISRWRNLTDAKTPNG 311
T+ ALD S V ++ G L P S++++ + R + + G
Sbjct: 256 FFTTLDLFALDLELYRYSGV--NMTGFRKLNIDNPHVSSIIEKWSMERLQ--APPRPETG 311
Query: 312 YIG--LNAYGFYAYDTVWLLARAIN-------SFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
+ + YD V+++A A + S + + + R ++ R D
Sbjct: 312 LLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPCALGPRFMNLIKEARWDG 371
Query: 363 L--RI-FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSN 419
L RI FN + LR ++ + G++ Y++ +++IG W++
Sbjct: 372 LTGRITFNKTDGLRKDF-DLDIISLKEEGTEKASGEVSKHLYKV-------WKKIGIWNS 423
Query: 420 YSGLSV 425
SGL++
Sbjct: 424 NSGLNM 429
>UNIPROTKB|F1M7M9 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0051967 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0048266 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0032230 GO:GO:0060080 GO:GO:0035249
GO:GO:0030534 InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 IPI:IPI00231402 GeneTree:ENSGT00590000083056
OMA:KELIDHR ProteinModelPortal:F1M7M9 Ensembl:ENSRNOT00000050073
ArrayExpress:F1M7M9 Uniprot:F1M7M9
Length = 951
Score = 183 (69.5 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 473 GNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 532
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 533 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 592
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 593 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 652
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 653 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 691
Score = 158 (60.7 bits), Expect = 8.4e-17, Sum P(3) = 8.4e-17
Identities = 63/291 (21%), Positives = 114/291 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 590 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 649
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 650 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 709
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 710 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 769
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K +
Sbjct: 770 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK-E 828
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSR 873
L +++ F+ + + +++ ++ D E G SSR
Sbjct: 829 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSRKN--NDVEQKGKSSR 877
Score = 147 (56.8 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 58/251 (23%), Positives = 101/251 (40%)
Query: 17 FVYRITAQASGRPSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQM 75
F+ I Q S P V+ IG + N V +LA K AV +N + T + T L +
Sbjct: 24 FLCYILPQTS--PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDI 81
Query: 76 QDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLS 134
Q N F A A + A+ GP + + V + N L+VP + P++
Sbjct: 82 QRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVD 141
Query: 135 SLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRC 193
S +++ A+ ++V +Y W+ V +Y D G+ L + + A R
Sbjct: 142 SRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRY 196
Query: 194 RISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVW 253
I K A +D LL ++ ++ ++ + + ++GM+ Y +
Sbjct: 197 NIKIKIRQLPPANKDA-KPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHY 255
Query: 254 IATSWLSTALD 264
T+ ALD
Sbjct: 256 FFTTLDLFALD 266
Score = 42 (19.8 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 411 YRRIGYWSNYSGLSV 425
+++IG W++ SGL++
Sbjct: 417 WKKIGIWNSNSGLNM 431
>UNIPROTKB|F1NU20 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0019228 "regulation of action
potential in neuron" evidence=IEA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=IEA]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0051967
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0042734
GO:GO:0043524 GO:GO:0005622 GO:GO:0042391 GO:GO:0006874
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AADN02002208 EMBL:AADN02002209
EMBL:AADN02002210 EMBL:AADN02002211 EMBL:AADN02002212
EMBL:AADN02002213 EMBL:AADN02002214 EMBL:AADN02002215
EMBL:AADN02002216 EMBL:AADN02002217 EMBL:AADN02002218
EMBL:AADN02002219 EMBL:AADN02002220 EMBL:AADN02002221
EMBL:AADN02002222 IPI:IPI00573083 ProteinModelPortal:F1NU20
Ensembl:ENSGALT00000024893 Uniprot:F1NU20
Length = 877
Score = 176 (67.0 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 57/220 (25%), Positives = 99/220 (45%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTE---LVRLITAGVYDAAV 543
G++ G+CID+ +L ++ +L+ G G + + +VR + D AV
Sbjct: 424 GNDRFEGYCIDLLRELSTILGFSYEIRLVEDGKYGAQEDASGQWNGMVRELIDHKADLAV 483
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 484 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 543
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 544 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 603
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 604 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 643
Score = 144 (55.7 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 542 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 601
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 602 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 660
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 661 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 719
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 720 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 779
Score = 126 (49.4 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 66/294 (22%), Positives = 123/294 (41%)
Query: 49 KLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAV 107
+LA + AV+ +N + T L T L Q N + F A +A + AI GP +
Sbjct: 23 ELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSS 82
Query: 108 TSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREV 167
+++ V + N L VP + + +S + ++V AI ++V + W+ V
Sbjct: 83 SANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTV 141
Query: 168 IAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIV 226
+Y DD G+ L + + A R + K T+D LL ++ + ++
Sbjct: 142 TVVY-DDS---TGLIRLQELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVI 196
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+ + A +GM+ Y +I T+ ALD S V ++ G L T
Sbjct: 197 FDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTE 254
Query: 287 TPD--SVLKRKFISRWRN--LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
S++++ + R + D+ +G++ +A YD V +++ A+ F
Sbjct: 255 NSQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA--LMYDAVHVVSVAVQQF 306
Score = 69 (29.3 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN S+G + ++I++ G ++G W SGL++
Sbjct: 325 GTRFMSLIKEAHWEGLTGRITFNKSNGLRTDFDLDVISLKEEGLEKVGTWDPLSGLNMT- 383
Query: 428 PETLYSKPPN--RSSSNQRL 445
E KP N S SN+ L
Sbjct: 384 -ENQKGKPANITDSLSNRSL 402
>UNIPROTKB|P39086 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0014054 "positive
regulation of gamma-aminobutyric acid secretion" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IDA] [GO:0051966 "regulation of
synaptic transmission, glutamatergic" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0048266 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0032230 GO:GO:0060080 GO:GO:0007417
GO:GO:0035249 DrugBank:DB00142 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 DrugBank:DB00273 GO:GO:0051966 GO:GO:0016595
eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:L19058
EMBL:U16125 EMBL:AJ249208 IPI:IPI00783047 IPI:IPI00937051
PIR:I58178 RefSeq:NP_000821.1 RefSeq:NP_783300.1 UniGene:Hs.664641
PDB:2ZNS PDB:2ZNT PDB:2ZNU PDB:3FUZ PDB:3FV1 PDB:3FV2 PDB:3FVG
PDB:3FVK PDB:3FVN PDB:3FVO PDBsum:2ZNS PDBsum:2ZNT PDBsum:2ZNU
PDBsum:3FUZ PDBsum:3FV1 PDBsum:3FV2 PDBsum:3FVG PDBsum:3FVK
PDBsum:3FVN PDBsum:3FVO ProteinModelPortal:P39086 SMR:P39086
STRING:P39086 PhosphoSite:P39086 DMDM:729597 PaxDb:P39086
PRIDE:P39086 DNASU:2897 Ensembl:ENST00000389125
Ensembl:ENST00000399907 GeneID:2897 KEGG:hsa:2897 UCSC:uc002ynn.3
UCSC:uc002yno.1 CTD:2897 GeneCards:GC21M030909 HGNC:HGNC:4579
MIM:138245 neXtProt:NX_P39086 PharmGKB:PA28973 KO:K05201
BindingDB:P39086 ChEMBL:CHEMBL1918 EvolutionaryTrace:P39086
GenomeRNAi:2897 NextBio:11463 ArrayExpress:P39086 Bgee:P39086
CleanEx:HS_GRIK1 Genevestigator:P39086 GermOnline:ENSG00000171189
GO:GO:0022843 Uniprot:P39086
Length = 918
Score = 183 (69.5 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 471 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 530
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 531 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 590
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 591 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 650
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 651 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Score = 141 (54.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 87/420 (20%), Positives = 167/420 (39%)
Query: 29 PSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLAL 86
P V+ IG + N V +LA K AV +N + T + T L +Q N F A
Sbjct: 34 PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEAS 93
Query: 87 AEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
A + A+ GP + + V + N L+VP + P++ + +++
Sbjct: 94 RRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYP 152
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEA 205
AI ++V +Y W+ V +Y D G+ L + + A R I K
Sbjct: 153 DYAAISRAILDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSG 208
Query: 206 TEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT 265
+D LL ++ + ++ + + ++GM+ Y + T+ ALD
Sbjct: 209 NKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDL 267
Query: 266 NSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKFISRWRNLTDAKTPNGYIG--LNAYGFY 321
S V ++ G L P S++++ + R + + G + +
Sbjct: 268 ELYRYSGV--NMTGFRLLNIDNPHVSSIIEKWSMERLQ--APPRPETGLLDGMMTTEAAL 323
Query: 322 AYDTVWLLA----RA----INSF-------FKQGGN-LSFSKDSRLSDIQGHLRLDSLRI 365
YD V+++A RA ++S ++ G ++ K++R + GH+ +
Sbjct: 324 MYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKT-- 381
Query: 366 FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
NG L +D L G + + G++ Y++ +++IG W++ SGL++
Sbjct: 382 -NG--LRKDFDLDIISLKEEGTEK--AAGEVSKHLYKV-------WKKIGIWNSNSGLNM 429
Score = 138 (53.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 59/242 (24%), Positives = 94/242 (38%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 588 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 647
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 648 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 707
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ AL +G + D YA L ST
Sbjct: 708 FFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQR 763
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 764 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 823
Query: 819 AK 820
K
Sbjct: 824 NK 825
>UNIPROTKB|E9PD61 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792018
ProteinModelPortal:E9PD61 SMR:E9PD61 Ensembl:ENST00000399913
UCSC:uc011acs.2 ArrayExpress:E9PD61 Bgee:E9PD61 Uniprot:E9PD61
Length = 920
Score = 183 (69.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 471 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 530
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 531 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 590
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 591 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 650
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 651 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Score = 152 (58.6 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 72/319 (22%), Positives = 127/319 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 588 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 647
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 648 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 707
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ AL +G + D YA L ST
Sbjct: 708 FFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQR 763
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 764 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 823
Query: 819 AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQ 878
K + L +++ F+ + + +++ ++ D E S +A ++
Sbjct: 824 NK-EASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKN--NDIEQC--LSFNAIME 878
Query: 879 TF-LSFVNEKEDEVKSRSK 896
+S N+K+ + KSR+K
Sbjct: 879 ELGISLKNQKKIKKKSRTK 897
Score = 141 (54.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 87/420 (20%), Positives = 167/420 (39%)
Query: 29 PSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLAL 86
P V+ IG + N V +LA K AV +N + T + T L +Q N F A
Sbjct: 34 PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEAS 93
Query: 87 AEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
A + A+ GP + + V + N L+VP + P++ + +++
Sbjct: 94 RRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYP 152
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEA 205
AI ++V +Y W+ V +Y D G+ L + + A R I K
Sbjct: 153 DYAAISRAILDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSG 208
Query: 206 TEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT 265
+D LL ++ + ++ + + ++GM+ Y + T+ ALD
Sbjct: 209 NKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDL 267
Query: 266 NSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKFISRWRNLTDAKTPNGYIG--LNAYGFY 321
S V ++ G L P S++++ + R + + G + +
Sbjct: 268 ELYRYSGV--NMTGFRLLNIDNPHVSSIIEKWSMERLQ--APPRPETGLLDGMMTTEAAL 323
Query: 322 AYDTVWLLA----RA----INSF-------FKQGGN-LSFSKDSRLSDIQGHLRLDSLRI 365
YD V+++A RA ++S ++ G ++ K++R + GH+ +
Sbjct: 324 MYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKT-- 381
Query: 366 FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
NG L +D L G + + G++ Y++ +++IG W++ SGL++
Sbjct: 382 -NG--LRKDFDLDIISLKEEGTEK--AAGEVSKHLYKV-------WKKIGIWNSNSGLNM 429
>UNIPROTKB|F1MG21 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 CTD:2898 KO:K05202 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:DAAA02026130 EMBL:DAAA02026131
EMBL:DAAA02026132 EMBL:DAAA02026133 EMBL:DAAA02026134
EMBL:DAAA02026135 EMBL:DAAA02026136 EMBL:DAAA02026137
EMBL:DAAA02026138 EMBL:DAAA02026139 EMBL:DAAA02026140
EMBL:DAAA02026141 EMBL:DAAA02026142 IPI:IPI00706450
RefSeq:NP_001179992.1 UniGene:Bt.32868 ProteinModelPortal:F1MG21
Ensembl:ENSBTAT00000015563 GeneID:615226 KEGG:bta:615226
NextBio:20899512 Uniprot:F1MG21
Length = 908
Score = 176 (67.0 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 455 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAV 514
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 515 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 574
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 575 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 634
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 144 (55.7 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 573 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 633 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 691
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 692 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 750
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 751 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 810
Score = 128 (50.1 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 70/320 (21%), Positives = 132/320 (41%)
Query: 25 ASGRPSVVNIGALLSF--STNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
+ G V+ G + + S +G +LA + AV+ +N + T L T L Q N +
Sbjct: 29 SQGTTHVLRFGGIFEYVESGPMG-AEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYD 87
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + AI GP + +++ V + N L VP + + +S + ++
Sbjct: 88 SFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFY 146
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAP 200
V AI ++V + W+ V +Y DD G+ L + + A R + K
Sbjct: 147 VSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIKAPSRYNLRLKIR 202
Query: 201 LSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLS 260
T+D LL ++ + ++ + + A +GM+ Y +I T+
Sbjct: 203 QLPADTKDA-KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDL 261
Query: 261 TALDTNSPFPSDVMDDIQGVLTLRTYTPD--SVLKRKFISRWRN--LTDAKTPNGYIGLN 316
ALD S V ++ G L T S++++ + R + D+ +G++ +
Sbjct: 262 FALDVEPYRYSGV--NMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 317 AYGFYAYDTVWLLARAINSF 336
A YD V +++ + F
Sbjct: 320 AA--LMYDAVHVVSVGVQQF 337
Score = 67 (28.6 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 414
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 415 -ESQKGKPANITDSLSNRSL 433
>UNIPROTKB|E7ENK3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790860
ProteinModelPortal:E7ENK3 SMR:E7ENK3 Ensembl:ENST00000327783
OMA:KELIDHR ArrayExpress:E7ENK3 Bgee:E7ENK3 Uniprot:E7ENK3
Length = 949
Score = 183 (69.5 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 471 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 530
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 531 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 590
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 591 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 650
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 651 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Score = 154 (59.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 67/295 (22%), Positives = 114/295 (38%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 588 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 647
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 648 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 707
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ AL +G + D YA L ST
Sbjct: 708 FFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQR 763
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 764 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 823
Query: 819 AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSR 873
K + L +++ F+ + + +++ ++ D E G SSR
Sbjct: 824 NK-EASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKN--NDIEQKGKSSR 875
Score = 141 (54.7 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 87/420 (20%), Positives = 167/420 (39%)
Query: 29 PSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLAL 86
P V+ IG + N V +LA K AV +N + T + T L +Q N F A
Sbjct: 34 PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEAS 93
Query: 87 AEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
A + A+ GP + + V + N L+VP + P++ + +++
Sbjct: 94 RRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYP 152
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEA 205
AI ++V +Y W+ V +Y D G+ L + + A R I K
Sbjct: 153 DYAAISRAILDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSG 208
Query: 206 TEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT 265
+D LL ++ + ++ + + ++GM+ Y + T+ ALD
Sbjct: 209 NKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDL 267
Query: 266 NSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKFISRWRNLTDAKTPNGYIG--LNAYGFY 321
S V ++ G L P S++++ + R + + G + +
Sbjct: 268 ELYRYSGV--NMTGFRLLNIDNPHVSSIIEKWSMERLQ--APPRPETGLLDGMMTTEAAL 323
Query: 322 AYDTVWLLA----RA----INSF-------FKQGGN-LSFSKDSRLSDIQGHLRLDSLRI 365
YD V+++A RA ++S ++ G ++ K++R + GH+ +
Sbjct: 324 MYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKT-- 381
Query: 366 FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
NG L +D L G + + G++ Y++ +++IG W++ SGL++
Sbjct: 382 -NG--LRKDFDLDIISLKEEGTEK--AAGEVSKHLYKV-------WKKIGIWNSNSGLNM 429
>UNIPROTKB|Q38PU3 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9541 "Macaca fascicularis" [GO:0030424 "axon" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0030424 GO:GO:0043197 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159934
HSSP:P22756 ProteinModelPortal:Q38PU3 SMR:Q38PU3 Uniprot:Q38PU3
Length = 908
Score = 172 (65.6 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 58/220 (26%), Positives = 96/220 (43%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 455 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAV 514
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 515 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 574
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 575 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQGSELMPKALSTR 634
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 144 (55.7 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 573 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 633 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 691
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 692 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 750
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 751 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 810
Score = 132 (51.5 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 71/320 (22%), Positives = 133/320 (41%)
Query: 25 ASGRPSVVNIGALLSF--STNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
+ G V+ G + + S +G +LA + AV+ +N + T L T L Q N +
Sbjct: 29 SQGTTHVLRFGGIFEYVESGPMG-AEELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYD 87
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + AI GP + +++ V + N L VP + + +S + ++
Sbjct: 88 SFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFY 146
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAP 200
V AI ++V + W+ V +Y DD G+ L + + A R + K
Sbjct: 147 VSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIKAPSRYNLRLKIR 202
Query: 201 LSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLS 260
T+D LL ++ + ++ + + A +GM+ Y +I T+
Sbjct: 203 QLPADTKDA-KPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDL 261
Query: 261 TALDTNSPFPSDVMDDIQGVLTLRTYTPD--SVLKRKFISRWRN--LTDAKTPNGYIGLN 316
ALD S V ++ G L T S++++ + R + D+ +G++ +
Sbjct: 262 FALDVEPYRYSGV--NMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD 319
Query: 317 AYGFYAYDTVWLLARAINSF 336
A YD V +++ A+ F
Sbjct: 320 AA--LMYDAVHVVSVAVQQF 337
Score = 67 (28.6 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 414
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 415 -ESQKGKPANITDSLSNRSL 433
>UNIPROTKB|E1BXA6 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:LLPWICQ
EMBL:AADN02043560 EMBL:AADN02043561 EMBL:AADN02043562
EMBL:AADN02043563 IPI:IPI00574242 ProteinModelPortal:E1BXA6
Ensembl:ENSGALT00000002914 Uniprot:E1BXA6
Length = 800
Score = 146 (56.5 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 54/218 (24%), Positives = 89/218 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GHN--NPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A L + P G GH N S ++ + D A+ I I
Sbjct: 255 GFSIDVLDALAKNLGFKYEIYQAPDGKYGHQLQNGSWNGMIGELINKRADLAISAITITP 314
Query: 551 NRTKMADFTQPYIES--GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWI 608
R + DF++ Y++ G+++ P K+ N ++ +PF +W A VG ++++
Sbjct: 315 ERESVVDFSKRYMDYSVGILIKKPEEKI--NIFSLFAPFDFAVWACIAAAIPIVGVLIFV 372
Query: 609 LEH----RLNDEFRGPPKRQVV--TIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXX 661
L R + + P + W + E TV+++ R
Sbjct: 373 LNRIQAVRAQNASQPSPSASSTLHSAIWVVYGAFVQQGGESTVNSVAMRIVMGSWWLFTL 432
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
SSYTA+L + LTV ++ +PI+ L S I Y
Sbjct: 433 IVCSSYTANLAAFLTVSRMDNPIRTFQDL-SKQMDISY 469
Score = 132 (51.5 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 55/189 (29%), Positives = 80/189 (42%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYL----VDELNIDES 718
SSYTA+L + LTV ++ +PI+ L S I Y +S Y + L D +
Sbjct: 436 SSYTANLAAFLTVSRMDNPIRTFQDL-SKQMDISYGTVRDSAVYEYFKAKGTNPLEQDNT 494
Query: 719 -----RLVPLNS-PEEYAKALKDG---PHKGGVAAVVDDRA--YAELFLSTRCEFSIVGQ 767
R + N+ + +G KG A + D YA L C +++G
Sbjct: 495 FAELWRTISKNNGADNCVSNPSEGIRKAKKGNYAFLWDVTVVEYAAL-TDDECSVTVIGN 553
Query: 768 VFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDV 823
+ G+G A SP S IL+L E+GDL + KW R C S A+ D
Sbjct: 554 SISSKGYGIALQHGSPYRDLFSQRILELQESGDLDVLKQKWWPRMGRCDLNSHTNAQTDG 613
Query: 824 DRLQLKSFS 832
L+L SF+
Sbjct: 614 KALKLHSFA 622
Score = 92 (37.4 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 311 GYIG-LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGG 369
GY+ L Y YD+V +LA N+F ++ + + + L+ ++ S + +NGG
Sbjct: 101 GYLQMLQVSNLYLYDSVLMLA---NAFHRKLEDRKWHSMASLNCMR-----KSTKPWNGG 152
Query: 370 NLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGY--------RRIGYWSNYS 421
+ ++I + ++TG G F G NP Y ++GT Y RR+ W +
Sbjct: 153 RSMLETIKKGHITGLTGVMEFREDG--ANP-YVQFEILGTSYSETFGKDVRRLATWDSEK 209
Query: 422 GLS 424
GL+
Sbjct: 210 GLN 212
>UNIPROTKB|G3V6Z5 [details] [associations]
symbol:Gria3 "Glutamate receptor, ionotropic, AMPA3 (Alpha
3), isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:MVQQFLQ UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V6Z5 Ensembl:ENSRNOT00000010367 Uniprot:G3V6Z5
Length = 888
Score = 149 (57.5 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 55/225 (24%), Positives = 94/225 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 772
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
+ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 773 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 817
Score = 115 (45.5 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 439 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 495
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 496 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 555
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 556 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 587
Score = 107 (42.7 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 42/268 (15%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ +Y W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 199
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 200 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 254
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 255 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 314
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 315 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 368
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + +G R+ GYW+ Y
Sbjct: 369 YGRRTNYTIDVYEMKVSGSRKAGYWNEY 396
>UNIPROTKB|F5H470 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AL356213
EMBL:AL035426 EMBL:AL590139 EMBL:Z83848 EMBL:Z82899 HGNC:HGNC:4573
ChiTaRS:GRIA3 IPI:IPI01012695 ProteinModelPortal:F5H470 SMR:F5H470
Ensembl:ENST00000542149 ArrayExpress:F5H470 Bgee:F5H470
Uniprot:F5H470
Length = 824
Score = 143 (55.4 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 52/211 (24%), Positives = 88/211 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 659 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 718
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 719 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 778
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQG 818
+ A+LKL+E G L ++ +KW + C S G
Sbjct: 779 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 809
Score = 115 (45.5 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 445 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 501
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 502 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 561
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 562 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 593
Score = 112 (44.5 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 43/268 (16%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ HY W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 205
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 206 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 260
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 261 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 320
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 321 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 374
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + +G R+ GYW+ Y
Sbjct: 375 YGRRTNYTIDVYEMKVSGSRKAGYWNEY 402
>UNIPROTKB|F8WEZ8 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0051402 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 EMBL:AL109919
EMBL:AP002528 EMBL:AP002529 EMBL:AP002530 HGNC:HGNC:4580
IPI:IPI01012035 ProteinModelPortal:F8WEZ8 SMR:F8WEZ8
Ensembl:ENST00000369134 ArrayExpress:F8WEZ8 Bgee:F8WEZ8
Uniprot:F8WEZ8
Length = 859
Score = 176 (67.0 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 406 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAV 465
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 466 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 525
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 526 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 585
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 586 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 625
Score = 144 (55.7 bits), Expect = 7.1e-16, Sum P(3) = 7.1e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 524 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 583
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 584 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 642
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 643 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 701
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 702 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 761
Score = 126 (49.4 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 66/294 (22%), Positives = 123/294 (41%)
Query: 49 KLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAV 107
+LA + AV+ +N + T L T L Q N + F A +A + AI GP +
Sbjct: 5 ELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSS 64
Query: 108 TSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREV 167
+++ V + N L VP + + +S + ++V AI ++V + W+ V
Sbjct: 65 SANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTV 123
Query: 168 IAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIV 226
+Y DD G+ L + + A R + K T+D LL ++ + ++
Sbjct: 124 TVVY-DDS---TGLIRLQELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVI 178
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+ + A +GM+ Y +I T+ ALD S V ++ G L T
Sbjct: 179 FDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTE 236
Query: 287 TPD--SVLKRKFISRWRN--LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
S++++ + R + D+ +G++ +A YD V +++ A+ F
Sbjct: 237 NTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA--LMYDAVHVVSVAVQQF 288
Score = 67 (28.6 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 307 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 365
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 366 -ESQKGKPANITDSLSNRSL 384
>UNIPROTKB|F1LP48 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation
of synaptic transmission" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
IPI:IPI00324708 PRIDE:F1LP48 Ensembl:ENSRNOT00000000415
ArrayExpress:F1LP48 Uniprot:F1LP48
Length = 870
Score = 176 (67.0 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 417 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAV 476
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 477 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 536
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 537 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 596
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 597 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 636
Score = 144 (55.7 bits), Expect = 7.4e-16, Sum P(3) = 7.4e-16
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 535 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 594
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 595 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 653
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 654 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 712
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 713 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 772
Score = 126 (49.4 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 66/294 (22%), Positives = 123/294 (41%)
Query: 49 KLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAV 107
+LA + AV+ +N + T L T L Q N + F A +A + AI GP +
Sbjct: 16 ELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSS 75
Query: 108 TSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREV 167
+++ V + N L VP + + +S + ++V AI ++V + W+ V
Sbjct: 76 SANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTV 134
Query: 168 IAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIV 226
+Y DD G+ L + + A R + K T+D LL ++ + ++
Sbjct: 135 TVVY-DDS---TGLIRLQELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVI 189
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+ + A +GM+ Y +I T+ ALD S V ++ G L T
Sbjct: 190 FDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTE 247
Query: 287 TPD--SVLKRKFISRWRN--LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
S++++ + R + D+ +G++ +A YD V +++ A+ F
Sbjct: 248 NTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA--LMYDAVHVVSVAVQQF 299
Score = 67 (28.6 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 318 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 376
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 377 -ESQKGKPANITDSLSNRSL 395
>UNIPROTKB|P42263 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
DrugBank:DB00142 GO:GO:0032281 GO:GO:0043083 GO:GO:0001919
Orphanet:777 EMBL:CH471107 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839
EMBL:U10302 EMBL:U10301 EMBL:X82068 EMBL:AF166365 EMBL:AF166362
EMBL:AF166363 EMBL:AF166364 EMBL:AF167332 EMBL:AF166366
EMBL:AF166367 EMBL:AF166368 EMBL:AF166369 EMBL:AF166370
EMBL:AF166371 EMBL:AF166372 EMBL:AF166373 EMBL:AF166375
EMBL:AF166374 EMBL:AL356213 EMBL:AL035426 EMBL:AL590139 EMBL:Z83848
EMBL:Z82899 IPI:IPI00219315 IPI:IPI00298700 PIR:S49460 PIR:S50128
PIR:S53696 RefSeq:NP_000819.3 RefSeq:NP_015564.4 UniGene:Hs.377070
ProteinModelPortal:P42263 SMR:P42263 DIP:DIP-46195N STRING:P42263
TCDB:1.A.10.1.4 PhosphoSite:P42263 DMDM:77416864 PaxDb:P42263
PRIDE:P42263 DNASU:2892 Ensembl:ENST00000264357
Ensembl:ENST00000371251 Ensembl:ENST00000371256 GeneID:2892
KEGG:hsa:2892 UCSC:uc004etq.4 UCSC:uc004etr.4 CTD:2892
GeneCards:GC0XP122318 HGNC:HGNC:4573 HPA:CAB007799 MIM:300699
MIM:305915 neXtProt:NX_P42263 PharmGKB:PA28968 InParanoid:P42263
KO:K05199 OMA:MVQQFLQ OrthoDB:EOG4XKV68 BindingDB:P42263
ChEMBL:CHEMBL3595 ChiTaRS:GRIA3 GenomeRNAi:2892 NextBio:11437
ArrayExpress:P42263 Bgee:P42263 CleanEx:HS_GRIA3
Genevestigator:P42263 GermOnline:ENSG00000125675 Uniprot:P42263
Length = 894
Score = 143 (55.4 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 52/211 (24%), Positives = 88/211 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 659 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 718
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 719 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 778
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQG 818
+ A+LKL+E G L ++ +KW + C S G
Sbjct: 779 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 809
Score = 115 (45.5 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 445 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 501
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 502 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 561
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 562 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 593
Score = 112 (44.5 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 43/268 (16%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ HY W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 205
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 206 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 260
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 261 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 320
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 321 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 374
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + +G R+ GYW+ Y
Sbjct: 375 YGRRTNYTIDVYEMKVSGSRKAGYWNEY 402
>MGI|MGI:95810 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA3 (alpha 3)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030425
"dendrite" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043083
"synaptic cleft" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043198 "dendritic shaft" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95810 GO:GO:0014069 GO:GO:0060992 GO:GO:0010226
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0043195 GO:GO:0032281 GO:GO:0043083
GO:GO:0001919 InterPro:IPR001828 EMBL:CH466570 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 CTD:2892 KO:K05199
OrthoDB:EOG4XKV68 EMBL:AB022342 EMBL:AB079072 EMBL:AF483494
EMBL:AF483495 EMBL:AK220530 EMBL:AL672290 EMBL:AL672232
EMBL:BC129855 IPI:IPI00131472 RefSeq:NP_058582.3 UniGene:Mm.327681
PDB:3LSW PDB:3LSX PDBsum:3LSW PDBsum:3LSX ProteinModelPortal:Q9Z2W9
SMR:Q9Z2W9 IntAct:Q9Z2W9 STRING:Q9Z2W9 PhosphoSite:Q9Z2W9
PaxDb:Q9Z2W9 PRIDE:Q9Z2W9 Ensembl:ENSMUST00000076349 GeneID:53623
KEGG:mmu:53623 UCSC:uc009tam.2 BindingDB:Q9Z2W9 ChEMBL:CHEMBL3624
EvolutionaryTrace:Q9Z2W9 NextBio:310361 Bgee:Q9Z2W9
CleanEx:MM_GRIA3 Genevestigator:Q9Z2W9
GermOnline:ENSMUSG00000001986 Uniprot:Q9Z2W9
Length = 888
Score = 149 (57.5 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 55/225 (24%), Positives = 94/225 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 772
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQ--GAKLDVDRLQLKS 830
+ A+LKLSE G L ++ +KW + C ++ G+K L L +
Sbjct: 773 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 817
Score = 115 (45.5 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 439 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 495
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 496 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 555
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 556 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 587
Score = 104 (41.7 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 43/268 (16%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ +Y W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDIQ-EFRRI 199
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + T +
Sbjct: 200 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIVLERVMHGGA 259
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
+I G + P + ++FI RW L + + P Y +D + ++A A
Sbjct: 260 --NITGFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 314
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 315 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 368
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + +G R+ GYW+ Y
Sbjct: 369 YGRRTNYTIDVYEMKVSGSRKAGYWNEY 396
>ZFIN|ZDB-GENE-020125-2 [details] [associations]
symbol:gria1b "glutamate receptor, ionotropic, AMPA
1b" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:BX890629 EMBL:CR749161 IPI:IPI00993241
ProteinModelPortal:F1QCH0 Ensembl:ENSDART00000129703 Bgee:F1QCH0
Uniprot:F1QCH0
Length = 930
Score = 136 (52.9 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 45/165 (27%), Positives = 74/165 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESRLV 721
SSYTA+L + LTV+++ SPI+ + L I Y S + ++ + E
Sbjct: 654 SSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLDGGSTKEFFRRSKIAVFEKMWS 712
Query: 722 PLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGW 774
+ S P + K +G KG A +++ + C+ VG G+
Sbjct: 713 YMKSAEPTVFVKTTDEGVVRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGY 772
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSSQG 818
G A P+ S L ++ A+LKL+E G L ++ +KW + C S G
Sbjct: 773 GVATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 817
Score = 129 (50.5 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 94/398 (23%), Positives = 157/398 (39%)
Query: 26 SGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLA 85
S PS +NIG L ++ V + A+ +DV P + ++ M D S +
Sbjct: 19 SSFPSNINIGGLFPTDSHEYDVFRFALSQH-NDV---PKLVP----QVDMVDTGSSFAMT 70
Query: 86 LAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTT 145
A +G AIIG D T +++ L V ++ S P ++ QF +R
Sbjct: 71 YAFCSQFSKG-VYAIIGLYDRKTMNMLMSFCGALHVCFVTPSF--PIDTNNQFVIQLRPE 127
Query: 146 QSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRI-SFKAPLSVE 204
D A+ +V+HY W + + +Y D G + + DT A K ++ S E
Sbjct: 128 LQD-----ALIALVEHYKWNKFVYMYSSDSEGLTVLQKILDTAAEKTWQVTSINFDTLTE 182
Query: 205 ATE-DEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTAL 263
A I DL K E +II+ ++ +++ L Y +I + L L
Sbjct: 183 AAFLKAIQDLDNK---KEFKIILDCELERLNSILQTLSELCNDL-KNYHYILAN-LGF-L 236
Query: 264 DTN-SPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLT--DAKTPNGYIGLNAYGF 320
D N + F + + G L YT +V + I W D K+P L G
Sbjct: 237 DLNLTEFRKGGAN-VTG-FQLMNYTNPTVSRT--IQDWLEFDSKDLKSPKRR--LKYTGA 290
Query: 321 YAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQAN 380
YD V ++A A + KQ + S+ G + + G ++ ++ Q
Sbjct: 291 LTYDGVTVMATAFQNLRKQ--RIDISRRGNA----GECLANPPAPWGQGIDIQRALQQVQ 344
Query: 381 MTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWS 418
G G +FN G N ++ +G +++GYW+
Sbjct: 345 FEGLTGHVQFNDKGHRTNFTVSVMEFGPSGPKKVGYWN 382
Score = 104 (41.7 bits), Expect = 5.5e-19, Sum P(3) = 5.5e-19
Identities = 28/129 (21%), Positives = 59/129 (45%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVYDA 541
G++ G+C+++ + Y+ Y+L GDG E +V + G D
Sbjct: 430 GNDKYEGYCVELAAEIAKHVGYS--YRLELVGDGKYGARDAETMMWNGMVGELVYGKADV 487
Query: 542 AVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFL 600
AV + I R ++ DF++P++ G+ +++ K ++FL P +W ++
Sbjct: 488 AVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYI 547
Query: 601 AVGAVVWIL 609
V V++++
Sbjct: 548 GVSVVLFLV 556
Score = 49 (22.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 36/203 (17%), Positives = 81/203 (39%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G+ + + D +G R+ + + + + + ++ APL++
Sbjct: 437 YCVELAAEIAKHVGYSYRLELVGDGKYGARDAETMMWNGMVGELVYGKADVAV-APLTIT 495
Query: 205 ATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM---LGTGYVWIATSWLST 261
+E+ D K ++ I++ P VF L + + +I S +
Sbjct: 496 LVREEVIDFS-KPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 554
Query: 262 ALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFY 321
+ SP+ D+ + P S + ++ +N + K N +G +
Sbjct: 555 LVSRFSPYEWHADDEEETADQQNQNQPPSPEPNQSPNQSQNQREEKQEKQPEHTNEFGIF 614
Query: 322 AYDTVWLLARAINSFFKQGGNLS 344
+++W ++ +F +QG ++S
Sbjct: 615 --NSLWF---SLGAFMQQGCDIS 632
>UNIPROTKB|Q38PU6 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839 HSSP:P19491
EMBL:DQ159931 ProteinModelPortal:Q38PU6 SMR:Q38PU6 PRIDE:Q38PU6
Uniprot:Q38PU6
Length = 894
Score = 141 (54.7 bits), Expect = 5.7e-19, Sum P(3) = 5.7e-19
Identities = 51/211 (24%), Positives = 88/211 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 659 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 718
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 719 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAV 778
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQG 818
+ A+LKL+E G L ++ +KW + C + G
Sbjct: 779 NLAVLKLNEQGLLDKLKNKWWYDKGECGTGG 809
Score = 115 (45.5 bits), Expect = 5.7e-19, Sum P(3) = 5.7e-19
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 445 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 501
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 502 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 561
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 562 ASIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 593
Score = 112 (44.5 bits), Expect = 5.7e-19, Sum P(3) = 5.7e-19
Identities = 43/268 (16%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ HY W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 205
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 206 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 260
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 261 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 320
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 321 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 374
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + +G R+ GYW+ Y
Sbjct: 375 YGRRTNYTIDVYEMKVSGSRKAGYWNEY 402
>UNIPROTKB|F8W7X3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01010383
ProteinModelPortal:F8W7X3 SMR:F8W7X3 PRIDE:F8W7X3
Ensembl:ENST00000309434 PhylomeDB:F8W7X3 ArrayExpress:F8W7X3
Bgee:F8W7X3 Uniprot:F8W7X3
Length = 920
Score = 183 (69.5 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 473 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 532
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 533 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 592
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 593 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 652
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 653 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 691
Score = 138 (53.6 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 59/242 (24%), Positives = 94/242 (38%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 590 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 649
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 650 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 709
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ AL +G + D YA L ST
Sbjct: 710 FFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQR 765
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 766 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 825
Query: 819 AK 820
K
Sbjct: 826 NK 827
Score = 136 (52.9 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 53/239 (22%), Positives = 94/239 (39%)
Query: 29 PSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLAL 86
P V+ IG + N V +LA K AV +N + T + T L +Q N F A
Sbjct: 34 PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEAS 93
Query: 87 AEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
A + A+ GP + + V + N L+VP + P++ + +++
Sbjct: 94 RRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYP 152
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEA 205
AI ++V +Y W+ V +Y D G+ L + + A R I K
Sbjct: 153 DYAAISRAILDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSG 208
Query: 206 TEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
+D LL ++ + ++ + + ++GM+ Y + T+ ALD
Sbjct: 209 NKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 266
>UNIPROTKB|F5H1W5 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01013593
ProteinModelPortal:F5H1W5 SMR:F5H1W5 Ensembl:ENST00000535441
ArrayExpress:F5H1W5 Bgee:F5H1W5 Uniprot:F5H1W5
Length = 922
Score = 183 (69.5 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 473 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 532
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 533 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 592
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 593 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 652
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 653 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 691
Score = 152 (58.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 72/319 (22%), Positives = 127/319 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 590 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 649
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 650 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 709
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ AL +G + D YA L ST
Sbjct: 710 FFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YALLMESTSIEYVTQR 765
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 766 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 825
Query: 819 AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQ 878
K + L +++ F+ + + +++ ++ D E S +A ++
Sbjct: 826 NK-EASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKN--NDIEQC--LSFNAIME 880
Query: 879 TF-LSFVNEKEDEVKSRSK 896
+S N+K+ + KSR+K
Sbjct: 881 ELGISLKNQKKIKKKSRTK 899
Score = 136 (52.9 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 53/239 (22%), Positives = 94/239 (39%)
Query: 29 PSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLAL 86
P V+ IG + N V +LA K AV +N + T + T L +Q N F A
Sbjct: 34 PQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEAS 93
Query: 87 AEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQ 146
A + A+ GP + + V + N L+VP + P++ + +++
Sbjct: 94 RRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYP 152
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEA 205
AI ++V +Y W+ V +Y D G+ L + + A R I K
Sbjct: 153 DYAAISRAILDLVLYYNWKTVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSG 208
Query: 206 TEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
+D LL ++ + ++ + + ++GM+ Y + T+ ALD
Sbjct: 209 NKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 266
>UNIPROTKB|F1P7K5 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005767 Uniprot:F1P7K5
Length = 859
Score = 176 (67.0 bits), Expect = 6.6e-19, Sum P(3) = 6.6e-19
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 406 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAV 465
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 466 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 525
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 526 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 585
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 586 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 625
Score = 144 (55.7 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 524 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 583
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 584 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 642
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 643 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 701
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 702 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 761
Score = 122 (48.0 bits), Expect = 6.6e-19, Sum P(3) = 6.6e-19
Identities = 65/294 (22%), Positives = 122/294 (41%)
Query: 49 KLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAV 107
+LA + AV+ +N + T L T L Q N + F A +A + AI GP +
Sbjct: 5 ELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSS 64
Query: 108 TSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREV 167
+++ V + N L VP + + +S + ++V AI ++V + W+ V
Sbjct: 65 SANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTV 123
Query: 168 IAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIV 226
+Y DD G+ L + + A R + K T+D LL ++ + ++
Sbjct: 124 TVVY-DDS---TGLIRLQELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVI 178
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+ + A +GM+ Y +I T+ ALD S V ++ G L T
Sbjct: 179 FDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTE 236
Query: 287 TPD--SVLKRKFISRWRN--LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
S++++ + R + D+ +G++ +A YD V +++ + F
Sbjct: 237 NTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA--LMYDAVHVVSVGVQQF 288
Score = 67 (28.6 bits), Expect = 6.6e-19, Sum P(3) = 6.6e-19
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 307 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 365
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 366 -ESQKGKPANITDSLSNRSL 384
>RGD|70958 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA 3"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0010226 "response to
lithium ion" evidence=IEP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043083 "synaptic
cleft" evidence=IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043198 "dendritic
shaft" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060992 "response to
fungicide" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069
GO:GO:0060992 GO:GO:0010226 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
GO:GO:0032281 GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW
PDB:3LSX PDBsum:3LSW PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062
EMBL:M85036 IPI:IPI00195443 IPI:IPI00231095 PIR:C40170
RefSeq:NP_001106213.1 RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN
PDB:3DP4 PDB:3M3F PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8
PDB:4F1Y PDB:4F22 PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39
PDB:4F3B PDB:4F3G PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K
PDBsum:3O21 PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y
PDBsum:4F22 PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31
PDBsum:4F39 PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492
SMR:P19492 IntAct:P19492 MINT:MINT-86220 STRING:P19492
PhosphoSite:P19492 PRIDE:P19492 GeneID:29628 KEGG:rno:29628
UCSC:RGD:70958 BindingDB:P19492 ChEMBL:CHEMBL3504
EvolutionaryTrace:P19492 NextBio:609848 ArrayExpress:P19492
Genevestigator:P19492 GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 144 (55.7 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 52/211 (24%), Positives = 88/211 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAV 772
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQG 818
+ A+LKL+E G L ++ +KW + C S G
Sbjct: 773 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 803
Score = 115 (45.5 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 439 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 495
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 496 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 555
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 556 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 587
Score = 108 (43.1 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 42/268 (15%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ +Y W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 142 AILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 199
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 200 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 254
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 255 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 314
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 315 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 368
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + +G R+ GYW+ Y
Sbjct: 369 YGRRTNYTIDVYEMKVSGSRKAGYWNEY 396
>UNIPROTKB|P19492 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0043195 GO:GO:0032281
GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW PDB:3LSX PDBsum:3LSW
PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062 EMBL:M85036
IPI:IPI00195443 IPI:IPI00231095 PIR:C40170 RefSeq:NP_001106213.1
RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN PDB:3DP4 PDB:3M3F
PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8 PDB:4F1Y PDB:4F22
PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39 PDB:4F3B PDB:4F3G
PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K PDBsum:3O21
PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y PDBsum:4F22
PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31 PDBsum:4F39
PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492 SMR:P19492
IntAct:P19492 MINT:MINT-86220 STRING:P19492 PhosphoSite:P19492
PRIDE:P19492 GeneID:29628 KEGG:rno:29628 UCSC:RGD:70958
BindingDB:P19492 ChEMBL:CHEMBL3504 EvolutionaryTrace:P19492
NextBio:609848 ArrayExpress:P19492 Genevestigator:P19492
GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 144 (55.7 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 52/211 (24%), Positives = 88/211 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAV 772
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQG 818
+ A+LKL+E G L ++ +KW + C S G
Sbjct: 773 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 803
Score = 115 (45.5 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 439 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 495
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 496 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 555
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 556 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 587
Score = 108 (43.1 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 42/268 (15%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ +Y W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 142 AILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 199
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 200 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 254
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 255 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 314
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 315 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 368
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + +G R+ GYW+ Y
Sbjct: 369 YGRRTNYTIDVYEMKVSGSRKAGYWNEY 396
>UNIPROTKB|F1NZT2 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030534 "adult behavior" evidence=IEA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0035235
GO:GO:0042734 GO:GO:0032230 GO:GO:0051899 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AADN02010740
EMBL:AADN02010741 IPI:IPI00602891 ProteinModelPortal:F1NZT2
Ensembl:ENSGALT00000025530 Uniprot:F1NZT2
Length = 874
Score = 176 (67.0 bits), Expect = 7.1e-19, Sum P(3) = 7.1e-19
Identities = 55/219 (25%), Positives = 97/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+ +G ++ +V+ + D AV
Sbjct: 425 GNDRFEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVA 484
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 485 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 544
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 545 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 604
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 605 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 643
Score = 148 (57.2 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 70/321 (21%), Positives = 131/321 (40%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 542 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 601
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 602 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 661
Query: 707 NYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST-------- 758
+ +++ E ++S ++ A +K+ G+ V+ YA L ST
Sbjct: 662 FFKKSKISTYEKMWAFMSSRQQTA-LVKNNDE--GIQRVLTTD-YALLMESTSIEYVTQR 717
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG 818
C + +G + G+G P SP I+ AIL+L E G L + +KW + C +
Sbjct: 718 NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEED 777
Query: 819 AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQ 878
+K + L +++ F+ + + +++ ++ D E S +A ++
Sbjct: 778 SK-EASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKN--SDIEQC--LSFNAIME 832
Query: 879 TF-LSFVNEKEDEVKSRSKRR 898
+S ++K+ + +SR+K +
Sbjct: 833 ELGISLKHQKKLKKRSRTKAK 853
Score = 123 (48.4 bits), Expect = 7.1e-19, Sum P(3) = 7.1e-19
Identities = 62/292 (21%), Positives = 113/292 (38%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
+ +LA K AV ++N + T + T L +Q N F A A + A+ GP
Sbjct: 22 IEELAFKFAVTNINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSH 81
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + PT+ +++ A+ ++V +Y W+
Sbjct: 82 SSSVSAVQSICNALEVPHIQTRWKHPTVDHKD-AFYINLYPDYAAISRAVLDLVLYYNWK 140
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K +D LL ++ +
Sbjct: 141 IVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDA-RPLLKEMKKGKEFY 195
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLR 284
++ + + +GM+ Y + T+ ALD S V ++ G L
Sbjct: 196 VIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALDLEPYRYSGV--NMTGFRLLN 253
Query: 285 TYTPD--SVLKRKFISRWRNLTDAKTPNGYIG--LNAYGFYAYDTVWLLARA 332
P SV+++ + R + K G + + YD V+++A A
Sbjct: 254 IENPQVSSVIEKWSMERLQ--APPKPETGLLDGMMTTEAALMYDAVYMVAVA 303
Score = 66 (28.3 bits), Expect = 7.1e-19, Sum P(3) = 7.1e-19
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 376 ILQANMTGTAGPARFNSHGDLINPA-YEIINVIGTGYRRIGYWSNYSGLSV 425
I +A G G FN L +II++ G +IG W++YSGL++
Sbjct: 333 IKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGVWNSYSGLNM 383
>UNIPROTKB|F1M526 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951061
ProteinModelPortal:F1M526 Ensembl:ENSRNOT00000067570
ArrayExpress:F1M526 Uniprot:F1M526
Length = 832
Score = 183 (69.5 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 432 GNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 491
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 492 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 551
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 552 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 611
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 612 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 650
Score = 143 (55.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 55/238 (23%), Positives = 94/238 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 549 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 608
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 609 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 668
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 669 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 728
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 729 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK 786
Score = 134 (52.2 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 81/395 (20%), Positives = 156/395 (39%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
V +LA K AV +N + T + T L +Q N F A A + A+ GP
Sbjct: 14 VEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSH 73
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + P++ S +++ A+ ++V +Y W+
Sbjct: 74 SSSVSAVQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWK 132
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K A +D LL ++ ++
Sbjct: 133 TVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPPANKDA-KPLLKEMKKSKEFY 187
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLR 284
++ + + ++GM+ Y + T+ ALD S V ++ G L
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV--NMTGFRLLN 245
Query: 285 TYTP--DSVLKRKFISRWRNLTDAKTPNGYIG--LNAYGFYAYDTVWLLARAIN------ 334
P S++++ + R + + G + + YD V+++A A +
Sbjct: 246 IDNPHVSSIIEKWSMERLQ--APPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLT 303
Query: 335 -SFFKQGGNLSFSKDSRLSDIQGHLRLDSL--RI-FNGGNLLRDSILQANMTGTAGPARF 390
S + + + R ++ R D L RI FN + LR ++
Sbjct: 304 VSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDF-DLDIISLKEEGTE 362
Query: 391 NSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
+ G++ Y++ +++IG W++ SGL++
Sbjct: 363 KASGEVSKHLYKV-------WKKIGIWNSNSGLNM 390
>UNIPROTKB|F1P7K6 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IEA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005766 Uniprot:F1P7K6
Length = 891
Score = 176 (67.0 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 438 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAV 497
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 498 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 557
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-R 650
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 558 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 617
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 618 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 657
Score = 144 (55.7 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 57/240 (23%), Positives = 88/240 (36%)
Query: 593 GVTAIFFLAV--GAVVWILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 556 GVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 615
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY-QVNSFARN 707
R SSYTA+L + LTV+++ SPI D L I Y V A
Sbjct: 616 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQT-KIEYGAVEDGATM 674
Query: 708 YLVDELNIDE-SRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA------ELFLSTRC 760
+ I ++ S + +K +G + D A+ E C
Sbjct: 675 TFFKKSKISTYDKMWAFMSSRRQSVLVKSN-EEGIQRVLTSDYAFLMESTTIEFVTQRNC 733
Query: 761 EFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 734 NLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESK 793
Score = 122 (48.0 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 65/294 (22%), Positives = 122/294 (41%)
Query: 49 KLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAV 107
+LA + AV+ +N + T L T L Q N + F A +A + AI GP +
Sbjct: 37 ELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSS 96
Query: 108 TSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREV 167
+++ V + N L VP + + +S + ++V AI ++V + W+ V
Sbjct: 97 SANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTV 155
Query: 168 IAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIV 226
+Y DD G+ L + + A R + K T+D LL ++ + ++
Sbjct: 156 TVVY-DDS---TGLIRLQELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVI 210
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+ + A +GM+ Y +I T+ ALD S V ++ G L T
Sbjct: 211 FDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTE 268
Query: 287 TPD--SVLKRKFISRWRN--LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
S++++ + R + D+ +G++ +A YD V +++ + F
Sbjct: 269 NTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA--LMYDAVHVVSVGVQQF 320
Score = 67 (28.6 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 339 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 397
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 398 -ESQKGKPANITDSLSNRSL 416
>UNIPROTKB|I3LT35 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:CU861922
EMBL:FP325290 Ensembl:ENSSSCT00000028121 Uniprot:I3LT35
Length = 896
Score = 184 (69.8 bits), Expect = 9.0e-19, Sum P(3) = 9.0e-19
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 417 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVA 476
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 477 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 536
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 537 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 596
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 597 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 635
Score = 149 (57.5 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 63/291 (21%), Positives = 112/291 (38%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 534 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 593
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 594 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 653
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 654 FFKKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 713
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + K +
Sbjct: 714 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDNK-E 772
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSR 873
L +++ F+ + + +++ SR + G SSR
Sbjct: 773 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYK-SRKNNDIEQQKGKSSR 822
Score = 123 (48.4 bits), Expect = 9.0e-19, Sum P(3) = 9.0e-19
Identities = 47/220 (21%), Positives = 87/220 (39%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
V +LA K AV +N + T + T L +Q N F A A + A+ GP
Sbjct: 14 VEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSH 73
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + P++ + +++ A+ ++V +Y W+
Sbjct: 74 SSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAVLDLVLYYNWK 132
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K +D LL ++ +
Sbjct: 133 TVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDA-KPLLKEMKKGKEFY 187
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
++ + + ++GM+ Y + T+ ALD
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 227
Score = 57 (25.1 bits), Expect = 9.0e-19, Sum P(3) = 9.0e-19
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 376 ILQANMTGTAGPARFNSHGDLINPA-YEIINVIGTGYRRIGYWSNYSGLSV 425
I +A G G FN L +II++ G +IG W++ SGL++
Sbjct: 325 IKEAQWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNM 375
>UNIPROTKB|F1Q0E7 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 OMA:LLPWICQ EMBL:AAEX03002913
EMBL:AAEX03002914 EMBL:AAEX03002915 EMBL:AAEX03002916
Ensembl:ENSCAFT00000025292 Uniprot:F1Q0E7
Length = 768
Score = 146 (56.5 bits), Expect = 9.9e-19, Sum P(3) = 9.9e-19
Identities = 52/218 (23%), Positives = 90/218 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH--NNPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A L + P G GH +N S ++ + + D A+ I I
Sbjct: 224 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITP 283
Query: 551 NRTKMADFTQPYIES--GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWI 608
R + DF++ Y++ G+++ P K+ + ++ +PF +W A VG ++++
Sbjct: 284 ERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPVVGVLIFV 341
Query: 609 LEH----RLNDEFRGPPKRQVV--TIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXX 661
L R + P + W + E +V+++ R
Sbjct: 342 LNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWWLFTL 401
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
SSYTA+L + LTV ++ +PI+ L S I Y
Sbjct: 402 IVCSSYTANLAAFLTVSRMDNPIRTFQDL-SKQVDISY 438
Score = 122 (48.0 bits), Expect = 9.9e-19, Sum P(3) = 9.9e-19
Identities = 53/188 (28%), Positives = 77/188 (40%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYL----VDELNIDES 718
SSYTA+L + LTV ++ +PI+ L S I Y +S Y + L D +
Sbjct: 405 SSYTANLAAFLTVSRMDNPIRTFQDL-SKQVDISYGTVRDSAVYEYFRAKGTNPLEQDST 463
Query: 719 -----RLVPLNS-PEEYAKALKDGPHKG--GVAAVVDDRAYAELFLSTR--CEFSIVGQV 768
R + N + + +G K G A + D A E T C ++ G
Sbjct: 464 FAELWRTISKNGGADNCVSSPSEGIRKAKKGSYAFLWDVAVVEYAALTDDDCSVTVTGNS 523
Query: 769 FTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDVD 824
+ G+G A SP S IL+L + GDL + KW C S A+ D
Sbjct: 524 VSSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTSPASAQADGK 583
Query: 825 RLQLKSFS 832
L+L SF+
Sbjct: 584 SLKLHSFA 591
Score = 95 (38.5 bits), Expect = 9.9e-19, Sum P(3) = 9.9e-19
Identities = 42/179 (23%), Positives = 78/179 (43%)
Query: 258 WLSTALDTNSPFPSDVMDDIQGVLTL-RTYTPDSVLKRKFISRWRNLTD--AKTPNGYIG 314
W+ + + P D++ G +T+ R P + +K + ++ GY+
Sbjct: 14 WVFVNEEISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCMRNNHRISSLLCDPQEGYLQ 73
Query: 315 -LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLR 373
L Y YD+V +LA N+F ++ + + + L+ I+ S + +NGG +
Sbjct: 74 MLQISNLYLYDSVLMLA---NAFHRKLEDRKWHSMASLNCIR-----KSTKPWNGGRSML 125
Query: 374 DSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGY--------RRIGYWSNYSGLS 424
D+I + ++TG G F D NP Y ++GT Y R++ W + GL+
Sbjct: 126 DTIKKGHITGLTGVMEFRE--DSSNP-YVQFEILGTTYSETFGKDMRKLATWDSEKGLN 181
>UNIPROTKB|G3V8Y9 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V8Y9 Ensembl:ENSRNOT00000029031 Uniprot:G3V8Y9
Length = 888
Score = 143 (55.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 52/211 (24%), Positives = 88/211 (41%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP + WFS + + +L GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 678 QKLSSPIKGIDSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS--PEEYAKAL 733
+++ SPI+ + L + + G + + + ++ + E + S P + K
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 734 KDG-----PHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDI 788
DG KG A +++ + C+ VG G+G A P+ S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 772
Query: 789 STAILKLSENGDLQRIHDKWLL-RSACSSQG 818
+ A+LKL+E G L ++ +KW + C S G
Sbjct: 773 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 803
Score = 115 (45.5 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYA-VPYKLIPFGDGH---NNPSC---TELVRLITAGV 538
++G+E G+C+D+ A + + + YKL GDG +P +V + G
Sbjct: 439 LEGNERYEGYCVDL---AYEIAKHVRIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGR 495
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW----- 592
D AV + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 496 ADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVF 555
Query: 593 ---GVTAIFFLA--VGAVVWILEHRLNDEFRGP 620
GV+ + FL W LE N+E R P
Sbjct: 556 AYIGVSVVLFLVSRFSPYEWHLEDN-NEEPRDP 587
Score = 107 (42.7 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 42/268 (15%), Positives = 108/268 (40%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
AI ++ +Y W + + +Y D + G + + A+ + +++ ++ +++ + E +
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQ-EFRRI 199
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ ++ + + ++ R + LG GY ++ + L V
Sbjct: 200 IEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDILLERV 254
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARA 332
M + + ++ + ++FI RW L + + P Y +D + ++A A
Sbjct: 255 MHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEA 314
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+Q + S+ D + + ++ G + ++ + G G +F++
Sbjct: 315 FRYLRRQ--RVDVSRRGSAGDCLANPAVP----WSQGIDIERALKMVQVQGMTGNIQFDT 368
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNY 420
+G N ++ + +G R+ GYW+ Y
Sbjct: 369 YGRRTNYTIDVYEMKVSGSRKAGYWNEY 396
>UNIPROTKB|F1LTY2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00590000083056
IPI:IPI00231400 Ensembl:ENSRNOT00000042581 ArrayExpress:F1LTY2
Uniprot:F1LTY2
Length = 834
Score = 183 (69.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 434 GNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 493
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 494 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 553
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 554 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 613
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 614 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 652
Score = 143 (55.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 55/238 (23%), Positives = 94/238 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 551 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 610
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 611 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 670
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 671 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 730
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 731 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK 788
Score = 132 (51.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 49/220 (22%), Positives = 89/220 (40%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
V +LA K AV +N + T + T L +Q N F A A + A+ GP
Sbjct: 14 VEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSH 73
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + P++ S +++ A+ ++V +Y W+
Sbjct: 74 SSSVSAVQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWK 132
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K A +D LL ++ ++
Sbjct: 133 TVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPPANKDA-KPLLKEMKKSKEFY 187
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
++ + + ++GM+ Y + T+ ALD
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 227
>UNIPROTKB|F1M4T4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00947926
ProteinModelPortal:F1M4T4 Ensembl:ENSRNOT00000065613
ArrayExpress:F1M4T4 Uniprot:F1M4T4
Length = 883
Score = 183 (69.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 434 GNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 493
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 494 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 553
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 554 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 613
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 614 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 652
Score = 155 (59.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 68/315 (21%), Positives = 127/315 (40%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 551 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 610
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 611 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 670
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 671 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 730
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K +
Sbjct: 731 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK-E 789
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQTF-L 881
L +++ F+ + + +++ ++ D E S +A ++ +
Sbjct: 790 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSRKN--NDVEQC--LSFNAIMEELGI 845
Query: 882 SFVNEKEDEVKSRSK 896
S N+K+ + KSR+K
Sbjct: 846 SLKNQKKLKKKSRTK 860
Score = 132 (51.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 49/220 (22%), Positives = 89/220 (40%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
V +LA K AV +N + T + T L +Q N F A A + A+ GP
Sbjct: 14 VEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSH 73
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + P++ S +++ A+ ++V +Y W+
Sbjct: 74 SSSVSAVQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWK 132
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K A +D LL ++ ++
Sbjct: 133 TVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPPANKDA-KPLLKEMKKSKEFY 187
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
++ + + ++GM+ Y + T+ ALD
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 227
>UNIPROTKB|F1M4B0 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
IPI:IPI00952320 ProteinModelPortal:F1M4B0
Ensembl:ENSRNOT00000067147 ArrayExpress:F1M4B0 Uniprot:F1M4B0
Length = 895
Score = 183 (69.5 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 417 GNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 476
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 477 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 536
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 537 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 596
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 597 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 635
Score = 158 (60.7 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 63/291 (21%), Positives = 114/291 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 534 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 593
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 594 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 653
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 654 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 713
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K +
Sbjct: 714 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK-E 772
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSR 873
L +++ F+ + + +++ ++ D E G SSR
Sbjct: 773 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSRKN--NDVEQKGKSSR 821
Score = 132 (51.5 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 49/220 (22%), Positives = 89/220 (40%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
V +LA K AV +N + T + T L +Q N F A A + A+ GP
Sbjct: 14 VEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSH 73
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + P++ S +++ A+ ++V +Y W+
Sbjct: 74 SSSVSAVQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWK 132
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K A +D LL ++ ++
Sbjct: 133 TVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPPANKDA-KPLLKEMKKSKEFY 187
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
++ + + ++GM+ Y + T+ ALD
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 227
Score = 60 (26.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 53/252 (21%), Positives = 100/252 (39%)
Query: 180 GIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVF 238
G+ L + + A R I K A +D LL ++ ++ ++ + +
Sbjct: 143 GLIRLQELIKAPSRYNIKIKIRQLPPANKDA-KPLLKEMKKSKEFYVIFDCSHETAAEIL 201
Query: 239 HVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKF 296
++GM+ Y + T+ ALD S V ++ G L P S++++
Sbjct: 202 KQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV--NMTGFRLLNIDNPHVSSIIEKWS 259
Query: 297 ISRWRNLTDAKTPNGYIG--LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDI 354
+ R + + G + + YD V+++A A + + L+ +S +
Sbjct: 260 MERLQ--APPRPETGLLDGMMTTEAALMYDAVYMVAIASH----RASQLT------VSSL 307
Query: 355 QGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YEIINVIGTGYRR 413
Q H R R+ G + I +A G G FN L +II++ G +
Sbjct: 308 QCH-RHKPWRL---GPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEK 363
Query: 414 IGYWSNYSGLSV 425
IG W++ SGL++
Sbjct: 364 IGIWNSNSGLNM 375
>UNIPROTKB|F1M5R4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951831
Ensembl:ENSRNOT00000066006 ArrayExpress:F1M5R4 Uniprot:F1M5R4
Length = 912
Score = 183 (69.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 434 GNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 493
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 494 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 553
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 554 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 613
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 614 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 652
Score = 158 (60.7 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 63/291 (21%), Positives = 114/291 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 551 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 610
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 611 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 670
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 671 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 730
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K +
Sbjct: 731 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK-E 789
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSR 873
L +++ F+ + + +++ ++ D E G SSR
Sbjct: 790 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKSRKN--NDVEQKGKSSR 838
Score = 132 (51.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 49/220 (22%), Positives = 89/220 (40%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
V +LA K AV +N + T + T L +Q N F A A + A+ GP
Sbjct: 14 VEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSH 73
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + P++ S +++ A+ ++V +Y W+
Sbjct: 74 SSSVSAVQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWK 132
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K A +D LL ++ ++
Sbjct: 133 TVTVVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPPANKDA-KPLLKEMKKSKEFY 187
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
++ + + ++GM+ Y + T+ ALD
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD 227
>UNIPROTKB|O43424 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISS] [GO:0034613 "cellular protein localization"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISS] [GO:0060134 "prepulse inhibition"
evidence=ISS] [GO:0030165 "PDZ domain binding" evidence=ISS]
[GO:0097110 "scaffold protein binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0006810
GO:GO:0043197 GO:GO:0035235 GO:GO:0045202 GO:GO:0060079
GO:GO:0060134 GO:GO:0035249 DrugBank:DB00142 GO:GO:0030288
GO:GO:0030165 GO:GO:0043523 InterPro:IPR001828 GO:GO:0097110
GO:GO:0008328 GO:GO:0005234 GO:GO:0008066 GO:GO:0004970
eggNOG:NOG276334 HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895
KO:K05207 OrthoDB:EOG4SBDX4 EMBL:AF009014 EMBL:AB209318
EMBL:AC022317 EMBL:AC093596 EMBL:AC093733 EMBL:AC096769
EMBL:AC104077 EMBL:AC105315 EMBL:AC105452 EMBL:AC112695
EMBL:AC115111 EMBL:BC099652 EMBL:BC099653 IPI:IPI00747494
RefSeq:NP_001501.2 UniGene:Hs.480281 ProteinModelPortal:O43424
SMR:O43424 MINT:MINT-257823 STRING:O43424 PhosphoSite:O43424
PaxDb:O43424 PRIDE:O43424 Ensembl:ENST00000282020 GeneID:2895
KEGG:hsa:2895 UCSC:uc011cdt.2 GeneCards:GC04P093225
H-InvDB:HIX0031353 HGNC:HGNC:4576 MIM:602368 neXtProt:NX_O43424
PharmGKB:PA28971 InParanoid:O43424 OMA:CSFYTVG PhylomeDB:O43424
GenomeRNAi:2895 NextBio:11455 ArrayExpress:O43424 Bgee:O43424
CleanEx:HS_GRID2 Genevestigator:O43424 Uniprot:O43424
Length = 1007
Score = 258 (95.9 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 195/889 (21%), Positives = 350/889 (39%)
Query: 22 TAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQ--DCN 79
T ++ S+++IGA+ F + K ++ + AV D+N + L K+ + D N
Sbjct: 17 TWDSANADSIIHIGAI--FDESAKKDDEV-FRTAVGDLNQNEEILQTEKITFSVTFVDGN 73
Query: 80 HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFP 139
+ F A+ EA LM +A++ ++ + +A+ + +P L F +
Sbjct: 74 NP-FQAVQEACELMNQGILALVSSIGCTSAGSLQSLADAMHIPHL-FIQRSTAGTPRSGC 131
Query: 140 YFVRTTQSDQYQMAA---------IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAA 190
R+ ++D Y ++ I +V Y W++ I Y D ++ GI D ++
Sbjct: 132 GLTRSNRNDDYTLSVRPPVYLHDVILRVVTEYAWQKFIIFY-DSEYDIRGIQEFLDKVSQ 190
Query: 191 KRCRISFKAPLSVEATEDE-ITDLLVKVALTESRIIVVHTHYNRGPVVFHVA---QYLG- 245
+ ++ + VE ++ IT L + + E + R +V + A ++
Sbjct: 191 QGMDVALQ---KVENNINKMITTLFDTMRIEE--LNRYRDTLRRAILVMNPATAKSFITE 245
Query: 246 MLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTL--RTY-TPDSVLKRKFISRWR- 301
++ T V W+ + N +++ G LT+ +T+ P ++ +R F R
Sbjct: 246 VVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRI 305
Query: 302 --NLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLR 359
L D K P + Y YDTV LLA N+F K+ + + + LS I R
Sbjct: 306 SSTLCDPKDPFAQ-NMEISNLYIYDTVLLLA---NAFHKKLEDRKWHSMASLSCI----R 357
Query: 360 LDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINV-----IGTGYRRI 414
+S + + GG + ++I + ++G G F +G N +EI+ +G G R++
Sbjct: 358 KNS-KPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKL 416
Query: 415 GYWSNYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTT-QKPRGWVFPNNGRHLRIG 473
G W+ +GL+ +L K + +N R V+ T ++P V N +G
Sbjct: 417 GCWNPVTGLN----GSLTDK---KLENNMR--GVVLRVVTVLEEPFVMVSENV-----LG 462
Query: 474 VPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELV-R 532
P + + GF +++ A + Y P + DG N ELV +
Sbjct: 463 KPKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQE-----DGTWNGLVGELVFK 515
Query: 533 LITAGVYDAAVGDIA--IITNRTKMADFTQPYI----ESGLVVVAPVRKLDSNAWAFLSP 586
G+ + ++ T+ D++ + E + + A + D + WA ++
Sbjct: 516 RADIGISALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIA- 574
Query: 587 FTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVS 646
G + L V + W+ RL + + WF + + E +
Sbjct: 575 ------GTVLLVGLLVYLLNWLNPPRL--QMGSMTSTTLYNSMWFVYGSFVQQGGEVPYT 626
Query: 647 ALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG------ 698
L R SSYTA+L + LT+ ++ S I+ + L + + P G
Sbjct: 627 TLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSA 686
Query: 699 -YQ------VNSFARNYLVDEL--NIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDR 749
Y+ +N F R+ + ++ I+ S N E A K K G A V D
Sbjct: 687 VYEHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKV---KYGNYAFVWDA 743
Query: 750 AYAELFL--STRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDK 807
A E C F +G G+G A SP S IL+L +NGD+ + K
Sbjct: 744 AVLEYVAINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHK 803
Query: 808 WLLRSA-C---SSQGAKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQ 852
W ++ C SS K L +KSF+ FI +++
Sbjct: 804 WWPKNGQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLE 852
>MGI|MGI:95813 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=IDA] [GO:0010975 "regulation
of neuron projection development" evidence=IMP] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=ISO;IPI] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IMP] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0043523 "regulation of neuron apoptotic
process" evidence=IGI;IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=ISO;IDA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] [GO:0060134 "prepulse inhibition" evidence=IMP]
[GO:0097110 "scaffold protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95813
GO:GO:0014069 GO:GO:0034613 GO:GO:0030054 GO:GO:0045211
GO:GO:0043197 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:D13266 EMBL:BC139823 IPI:IPI00123534 PIR:PN0156
RefSeq:NP_032193.1 UniGene:Mm.439651 UniGene:Mm.447390
ProteinModelPortal:Q61625 SMR:Q61625 IntAct:Q61625 MINT:MINT-126960
STRING:Q61625 TCDB:1.A.10.1.8 PhosphoSite:Q61625 PaxDb:Q61625
PRIDE:Q61625 Ensembl:ENSMUST00000095852 GeneID:14804 KEGG:mmu:14804
UCSC:uc009cdz.1 InParanoid:A4QPG1 BindingDB:Q61625 ChiTaRS:GRID2
NextBio:286973 Bgee:Q61625 CleanEx:MM_GRID2 Genevestigator:Q61625
GermOnline:ENSMUSG00000071424 Uniprot:Q61625
Length = 1007
Score = 258 (95.9 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 197/884 (22%), Positives = 352/884 (39%)
Query: 7 MLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTL 66
+LL + +C + T + S+++IGA+ F + K ++ + AV D+N + L
Sbjct: 6 LLLFLSFC----WSRTWDLATADSIIHIGAI--FDESAKKDDEV-FRTAVGDLNQNEEIL 58
Query: 67 GGTKLKLQMQ--DCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLL 124
K+ + D N+ F A+ EA LM +A++ ++ + +A+ + +P L
Sbjct: 59 QTEKITFSVTFVDGNNP-FQAVQEACELMNQGILALVSSIGCTSAGSLQSLADAMHIPHL 117
Query: 125 SFSATDPTLSSLQFPYFVRTTQSDQYQMAA---------IAEIVDHYGWREVIAIYVDDD 175
F + R+ ++D Y ++ I +V Y W++ I Y D +
Sbjct: 118 -FIQRSTAGTPRSGCGLTRSNRNDDYTLSVRPPVYLNEVILRVVTEYAWQKFIIFY-DSE 175
Query: 176 HGRNGIAALGDTLAAKRCRISFKAPLSVEATEDE-ITDLLVKVALTESRIIVVHTHYNRG 234
+ GI D ++ + ++ + VE ++ IT L + + E + R
Sbjct: 176 YDIRGIQEFLDKVSQQGMDVALQ---KVENNINKMITTLFDTMRIEE--LNRYRDTLRRA 230
Query: 235 PVVFHVA---QYLG-MLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTL--RTY-T 287
+V + A ++ ++ T V W+ + N +++ G LT+ +T+
Sbjct: 231 ILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPV 290
Query: 288 PDSVLKRKFISRWR---NLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLS 344
P ++ +R F R +L D K P + Y YDTV LLA N+F K+ +
Sbjct: 291 PQNISQRCFRGNHRISSSLCDPKDPFAQ-NMEISNLYIYDTVLLLA---NAFHKKLEDRK 346
Query: 345 FSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEII 404
+ + LS I R +S + + GG + ++I + + G G F +G N +EI+
Sbjct: 347 WHSMASLSCI----RKNS-KPWQGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEIL 401
Query: 405 NV-----IGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTT-QKP 458
+G G R++G W+ +GL+ +L K + +N R V+ T ++P
Sbjct: 402 GTNYGEELGRGVRKLGCWNPVTGLN----GSLTDK---KLENNMR--GVVLRVVTVLEEP 452
Query: 459 RGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPF 518
V N +G P + + GF +++ A + Y P +
Sbjct: 453 FVMVSENV-----LGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQE---- 501
Query: 519 GDGHNNPSCTELV-RLITAGVYDAAVGDIA--IITNRTKMADFTQPYI----ESGLVVVA 571
DG N ELV + G+ + ++ T+ D++ + E + + A
Sbjct: 502 -DGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFA 560
Query: 572 PVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWF 631
+ D + WA ++ G + L V + W+ RL + + WF
Sbjct: 561 CLAPFDLSLWACIA-------GTVLLVGLLVYLLNWLNPPRL--QMGSMTSTTLYNSMWF 611
Query: 632 SFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+ + E + L R SSYTA+L + LT+ ++ S I+ + L
Sbjct: 612 VYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDL 671
Query: 691 -RSSNYPIG-------YQ------VNSFARNYLVDEL--NIDESRLVPLNSPEEYAKALK 734
+ ++ P G YQ +N F R+ + ++ I+ S N E A K
Sbjct: 672 SKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQK 731
Query: 735 DGPHKGGVAAVVDDRAYAELFL--STRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAI 792
K G A V D A E C F VG G+G A SP S I
Sbjct: 732 V---KYGNYAFVWDAAVLEYVAINDPDCSFYTVGNTVADRGYGIALQHGSPYRDVFSQRI 788
Query: 793 LKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDVDRLQLKSFS 832
L+L ++GD+ + KW ++ C SS AK L +KS +
Sbjct: 789 LELQQSGDMDILKHKWWPKNGQCDLYSSVDAKQKGGALDIKSLA 832
>UNIPROTKB|F1P2K1 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00819235
Ensembl:ENSGALT00000040367 Uniprot:F1P2K1
Length = 797
Score = 194 (73.4 bits), Expect = 4.1e-18, Sum P(3) = 4.1e-18
Identities = 66/299 (22%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 439 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 498
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 499 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 558
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 559 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 617
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 618 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 676
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S AILK ENG ++ + W+ C S+
Sbjct: 677 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSR 735
Score = 113 (44.8 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 75/365 (20%), Positives = 146/365 (40%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ F+ K++ +G + +
Sbjct: 199 PDGVIGLQLINGKNESAHISDAVAVVAQAVHDLFE--------KENITDPPRGCV--GNT 248
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + + G G FN GD Y I+N+ ++G ++ +
Sbjct: 249 NIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNV 308
Query: 423 LS----VVRPETLYSKPPNRSSS--------NQRLYSVIWPGQTTQKPRGWVFPNNGRHL 470
L+ ++ P KP S +Q + + P Q R F NG +
Sbjct: 309 LTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTCRE-EFTINGDPV 367
Query: 471 R---IGVPNR-VSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGH- 522
+ PN + R V++ GFCID+ ++ + L+ FG
Sbjct: 368 KKVFCTGPNETIPGRPTVAL----CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 523 -NNPSCTE---LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDS 578
NN + E ++ + +G D V + I R + +F++P+ GL ++ S
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRS 483
Query: 579 NAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWF 631
+F+ PF +W + + V ++++L+ ++N E + + WF
Sbjct: 484 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 543
Query: 632 SFSTM 636
S+ +
Sbjct: 544 SWGVL 548
Score = 81 (33.6 bits), Expect = 4.1e-18, Sum P(3) = 4.1e-18
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 140 VTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVWL 184
Score = 80 (33.2 bits), Expect = 4.1e-18, Sum P(3) = 4.1e-18
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 103 PQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDH 161
P D +T VS+ A ++P++ + S F+RT +Q E++
Sbjct: 13 PNDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRV 72
Query: 162 YGWREVIAIYVDDDHGRNGIAALGDTLAAKR 192
+ W VI I DD GR L +TL +R
Sbjct: 73 FNWNHVILIVSDDHEGRAAQKKL-ETLLEER 102
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 630 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 679
>UNIPROTKB|Q38PU2 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9541 "Macaca fascicularis" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISS] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0007196 "adenylate cyclase-inhibiting G-protein
coupled glutamate receptor signaling pathway" evidence=ISS]
[GO:0007216 "G-protein coupled glutamate receptor signaling
pathway" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043197
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
HSSP:P22756 GO:GO:0001640 EMBL:DQ159935 ProteinModelPortal:Q38PU2
SMR:Q38PU2 Uniprot:Q38PU2
Length = 919
Score = 171 (65.3 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 478 VSFREFV-SVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRL 533
V FR+ ++ G++ G+CID+ ++L ++ +L+ +G + +V+
Sbjct: 447 VMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKE 506
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW 592
+ D AV + I R K DF++P++ G+ ++ + + ++FL+P +P +W
Sbjct: 507 LIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIW 566
Query: 593 GVTAIFFLAVGAVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHK 641
+ +L V V++++ + D P +VV T+ FWF ++
Sbjct: 567 MYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGS 626
Query: 642 EKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
E AL R SSYTA+L + LTV+++ SPI D L
Sbjct: 627 ELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 148 (57.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 674 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTAD 733
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 734 YALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 794 IMKEKWWRGSGCPEEENK 811
Score = 140 (54.3 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 62/245 (25%), Positives = 101/245 (41%)
Query: 27 GRPSVVNIGALLSFS----TNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
G P V+ IG + ++ V + A + + + +N + T L T L +Q + H
Sbjct: 31 GMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHD 90
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + VAI GP ++ V + N L+VP + L + ++
Sbjct: 91 SFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFY 149
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA-P 200
V AI ++V + WR +Y DD G + L +A R I K
Sbjct: 150 VNLYPDYASLSHAILDLVQYLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIRQ 206
Query: 201 LSVEATEDEITDLLVKVAL-TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWL 259
L V++ D+ LL ++ E RII +H + A +GM+ Y +I T+
Sbjct: 207 LPVDS--DDSRPLLKEMKRGREFRIIFDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLD 263
Query: 260 STALD 264
ALD
Sbjct: 264 LYALD 268
Score = 68 (29.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 68/279 (24%), Positives = 109/279 (39%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKA-PLSVEATEDEITDLLVKVAL-TESRII 225
A V DD G+ L + + A R I K L V++ D+ LL ++ E RII
Sbjct: 175 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIRQLPVDS--DDSRPLLKEMKRGREFRII 230
Query: 226 VVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRT 285
+H + A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 231 FDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNV 287
Query: 286 YTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSF 345
P + +W P GL G D LL A++ ++ +
Sbjct: 288 DNPHV---SAIVEKWSMERLQAAPRAESGL-LDGVMMTDAA-LLYDAVHIV-----SVCY 337
Query: 346 SKDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YE 402
+ +++ +Q H R + R GG + + I +A G G FN L +
Sbjct: 338 QRAPQMTVNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393
Query: 403 IINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
II++ G ++G WS GL++ E + PN + S
Sbjct: 394 IISLKEDGLEKVGVWSPADGLNIT--EVAKGRGPNVTDS 430
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRI 804
F + S L D I+ L E+G L+++
Sbjct: 380 FNKTSGLRTDFDLDIISLKEDG-LEKV 405
>ZFIN|ZDB-GENE-030131-6502 [details] [associations]
symbol:grik1a "glutamate receptor, ionotropic,
kainate 1a" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-6502 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 KO:K05201
GeneTree:ENSGT00590000083056 EMBL:AL837524 EMBL:CT573197
EMBL:AL954816 IPI:IPI00611951 RefSeq:XP_001924038.3
UniGene:Dr.14817 UniGene:Dr.155893 ProteinModelPortal:E9QGN5
Ensembl:ENSDART00000147089 GeneID:798001 KEGG:dre:798001 CTD:798001
NextBio:20933239 ArrayExpress:E9QGN5 Bgee:E9QGN5 Uniprot:E9QGN5
Length = 904
Score = 188 (71.2 bits), Expect = 4.7e-18, Sum P(3) = 4.7e-18
Identities = 71/293 (24%), Positives = 129/293 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+ +G ++ +VR + + D AV
Sbjct: 456 GNDRFEGYCLDLLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAVA 515
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P TP +W + L V
Sbjct: 516 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVS 575
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TIF---WFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P +VV T+ WF + + E AL R
Sbjct: 576 CVLFVIARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRI 635
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFARNYL 709
SSYTA+L + LTV+++ SPI D L + + G + S +
Sbjct: 636 LGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRDGSTMTFFK 695
Query: 710 VDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEF 762
+++ E ++S + A +K+ K G+ V+ YA L ST E+
Sbjct: 696 KSKISTYEKMWAFMSSRKNTA-LVKNS--KDGITRVLTTD-YALLMESTSIEY 744
Score = 146 (56.5 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 61/284 (21%), Positives = 108/284 (38%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N ++ WF + + E AL
Sbjct: 573 GVSCVLFVIARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALS 632
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 633 TRILGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRDGSTMT 692
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S + A K KDG + A++ + E C
Sbjct: 693 FFKKSKISTYEKMWAFMSSRKNTALVKNSKDGITRVLTTDYALLMESTSIEYITQRNCNL 752
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ VG + G+G P SP ++ AIL+L E G L + +KW + C + +K +
Sbjct: 753 TQVGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK-E 811
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTE 866
L +++ F+ + + +++ H D E
Sbjct: 812 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYK--SHKNSDIE 853
Score = 118 (46.6 bits), Expect = 4.7e-18, Sum P(3) = 4.7e-18
Identities = 66/333 (19%), Positives = 126/333 (37%)
Query: 8 LLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVG-KVAKLAIKAAVDDVNSDPTTL 66
LL F+ + + ++ Q V+ IG + N + +LA K AV +N + T +
Sbjct: 20 LLFFFFYSMAKFYLSEQ-----QVIRIGGIFETRENEPVSMDELAFKFAVTSINRNRTLM 74
Query: 67 GGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLS 125
T L +Q N F A + A+ GP + + V + N L+VP +
Sbjct: 75 PNTTLTYDIQRVNLFDSFEASRRVCDQLALGVAAVFGPSHSSSVSAVQSICNALEVPHIQ 134
Query: 126 FSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALG 185
P++ + +++ AI +IV Y W+ V +Y D G+ +
Sbjct: 135 TRWKHPSVDNKD-NFYINLYPEYTSISRAILDIVIFYKWKCVTVVYEDS----TGLMRMQ 189
Query: 186 DTLAAKRCRISFKAPL-SVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYL 244
+ + A + + K + + + + LL ++ + ++ Y + +
Sbjct: 190 ELIKAPS-KNNLKIRIRQLPSGGGDSRPLLKEMKKEKEFYVIFDCSYQVAAELLKQLMSM 248
Query: 245 GMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISRW---R 301
GM+ Y + T+ ALD P+ ++ + R D I +W R
Sbjct: 249 GMMTEYYHFFFTTLDLFALDLE-PYRYSGVN----MTAFRLLNLDDSYVASVIQKWSMER 303
Query: 302 NLTDAKTPNGYIG--LNAYGFYAYDTVWLLARA 332
L K +G + + YD V+++A A
Sbjct: 304 QLAPPKPESGLMSGIMTTAAALMYDAVFMVAVA 336
Score = 51 (23.0 bits), Expect = 4.7e-18, Sum P(3) = 4.7e-18
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 402 EIINVIGTGYRRIGYWSNYSGLSV 425
++I++ G +IG W++Y+GL++
Sbjct: 393 DLISLKEDGTAKIGVWNSYTGLNL 416
>UNIPROTKB|A9Z1Z8 [details] [associations]
symbol:GRIK3 "Glutamate receptor, ionotropic, kainate 3,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471059 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 HSSP:P19491 EMBL:AL355386 EMBL:AC117945
RefSeq:NP_000822.2 UniGene:Hs.128848 DNASU:2899 GeneID:2899
KEGG:hsa:2899 CTD:2899 HGNC:HGNC:4581 PharmGKB:PA28975 KO:K05203
GenomeRNAi:2899 NextBio:11475 EMBL:AL591883 EMBL:AJ249210
IPI:IPI00646850 SMR:A9Z1Z8 STRING:A9Z1Z8 Ensembl:ENST00000373093
UCSC:uc001cba.1 Uniprot:A9Z1Z8
Length = 872
Score = 171 (65.3 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 478 VSFREFV-SVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRL 533
V FR+ ++ G++ G+CID+ ++L ++ +L+ +G + +V+
Sbjct: 447 VMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKE 506
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW 592
+ D AV + I R K DF++P++ G+ ++ + + ++FL+P +P +W
Sbjct: 507 LIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIW 566
Query: 593 GVTAIFFLAVGAVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHK 641
+ +L V V++++ + D P +VV T+ FWF ++
Sbjct: 567 MYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGS 626
Query: 642 EKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
E AL R SSYTA+L + LTV+++ SPI D L
Sbjct: 627 ELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 148 (57.2 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 674 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTAD 733
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 734 YALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 794 IMKEKWWRGSGCPEEENK 811
Score = 139 (54.0 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 61/245 (24%), Positives = 101/245 (41%)
Query: 27 GRPSVVNIGALLSFS----TNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
G P V+ IG + ++ V + A + + + +N + T L T L +Q + H
Sbjct: 31 GMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHD 90
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + VAI GP ++ V + N L+VP + L + ++
Sbjct: 91 SFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFY 149
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA-P 200
V AI ++V + WR +Y DD G + L +A R I K
Sbjct: 150 VNLYPDYASLSHAILDLVQYLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIRQ 206
Query: 201 LSVEATEDEITDLLVKVAL-TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWL 259
L +++ D+ LL ++ E RII +H + A +GM+ Y +I T+
Sbjct: 207 LPIDS--DDSRPLLKEMKRGREFRIIFDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLD 263
Query: 260 STALD 264
ALD
Sbjct: 264 LYALD 268
Score = 67 (28.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 67/279 (24%), Positives = 109/279 (39%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKA-PLSVEATEDEITDLLVKVAL-TESRII 225
A V DD G+ L + + A R I K L +++ D+ LL ++ E RII
Sbjct: 175 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIRQLPIDS--DDSRPLLKEMKRGREFRII 230
Query: 226 VVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRT 285
+H + A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 231 FDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNV 287
Query: 286 YTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSF 345
P + +W P GL G D LL A++ ++ +
Sbjct: 288 DNPHV---SAIVEKWSMERLQAAPRSESGL-LDGVMMTDAA-LLYDAVHIV-----SVCY 337
Query: 346 SKDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YE 402
+ +++ +Q H R + R GG + + I +A G G FN L +
Sbjct: 338 QRAPQMTVNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393
Query: 403 IINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
II++ G ++G WS GL++ E + PN + S
Sbjct: 394 IISLKEDGLEKVGVWSPADGLNIT--EVAKGRGPNVTDS 430
Score = 37 (18.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRI 804
F + S L D I+ L E+G L+++
Sbjct: 380 FNKTSGLRTDFDLDIISLKEDG-LEKV 405
>UNIPROTKB|F1N6E6 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 OMA:LLPWICQ EMBL:DAAA02062138
EMBL:DAAA02062139 EMBL:DAAA02062140 EMBL:DAAA02062141
EMBL:DAAA02062142 IPI:IPI00694102 Ensembl:ENSBTAT00000026142
Uniprot:F1N6E6
Length = 756
Score = 139 (54.0 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 50/218 (22%), Positives = 89/218 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH--NNPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A L + P G GH +N S ++ + + D A+ I I
Sbjct: 212 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITP 271
Query: 551 NRTKMADFTQPYIES--GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWI 608
R + DF++ Y++ G+++ P K+ + ++ +PF +W A VG ++++
Sbjct: 272 ERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPVVGVLIFV 329
Query: 609 LEH----RLNDEFRGPPKRQVV--TIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXX 661
L R + P + W + E + +++ R
Sbjct: 330 LNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSANSMAMRIVMGSWWLFTL 389
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
SSYTA+L + LTV ++ +PI+ L S + Y
Sbjct: 390 IVCSSYTANLAAFLTVSRMDNPIRTFQDL-SKQVEMSY 426
Score = 117 (46.2 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 51/188 (27%), Positives = 78/188 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYL----VDELNIDES 718
SSYTA+L + LTV ++ +PI+ L S + Y +S Y + L D +
Sbjct: 393 SSYTANLAAFLTVSRMDNPIRTFQDL-SKQVEMSYGTVRDSAVYEYFRAKGTNPLEQDST 451
Query: 719 -----RLVPLNS-PEEYAKALKDGPHKG--GVAAVVDDRAYAELFLSTR--CEFSIVGQV 768
R + N + + +G K G A + D A E T C +++
Sbjct: 452 FAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIANS 511
Query: 769 FTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDVD 824
+ G+G A SP S IL+L + GDL + KW + C S A+ D
Sbjct: 512 VSSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLTSHASAQADGK 571
Query: 825 RLQLKSFS 832
L+L SF+
Sbjct: 572 SLKLHSFA 579
Score = 100 (40.3 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 44/179 (24%), Positives = 80/179 (44%)
Query: 258 WLSTALDTNSPFPSDVMDDIQGVLTL-RTYTPDSVLKRKFISRWRNLTD--AKTPNGYIG 314
WLS+ + + P D++ G +T+ R P + +K + ++ GY+
Sbjct: 3 WLSSQ-EISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCMRNNHRISSLLCDPQEGYLQ 61
Query: 315 -LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLR 373
L Y YD+V +LA N+F ++ + + + L+ I+ S + +NGG +
Sbjct: 62 MLQISNLYLYDSVLMLA---NAFHRKLEDRKWHSMASLNCIR-----KSTKPWNGGRSML 113
Query: 374 DSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGY--------RRIGYWSNYSGLS 424
D+I + ++TG G F D NP Y ++GT Y R++ W + GL+
Sbjct: 114 DTIKKGHITGLTGVMEFRE--DSSNP-YVQFEILGTTYSETFGKDMRKLATWDSEKGLN 169
>UNIPROTKB|F1NKY9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00821429
Ensembl:ENSGALT00000014471 Uniprot:F1NKY9
Length = 856
Score = 194 (73.4 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 66/299 (22%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 439 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 498
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 499 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 558
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 559 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 617
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 618 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 676
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S AILK ENG ++ + W+ C S+
Sbjct: 677 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSR 735
Score = 113 (44.8 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 75/365 (20%), Positives = 146/365 (40%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ F+ K++ +G + +
Sbjct: 199 PDGVIGLQLINGKNESAHISDAVAVVAQAVHDLFE--------KENITDPPRGCV--GNT 248
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + + G G FN GD Y I+N+ ++G ++ +
Sbjct: 249 NIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNV 308
Query: 423 LS----VVRPETLYSKPPNRSSS--------NQRLYSVIWPGQTTQKPRGWVFPNNGRHL 470
L+ ++ P KP S +Q + + P Q R F NG +
Sbjct: 309 LTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTCRE-EFTINGDPV 367
Query: 471 R---IGVPNR-VSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGH- 522
+ PN + R V++ GFCID+ ++ + L+ FG
Sbjct: 368 KKVFCTGPNETIPGRPTVAL----CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 523 -NNPSCTE---LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDS 578
NN + E ++ + +G D V + I R + +F++P+ GL ++ S
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRS 483
Query: 579 NAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWF 631
+F+ PF +W + + V ++++L+ ++N E + + WF
Sbjct: 484 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 543
Query: 632 SFSTM 636
S+ +
Sbjct: 544 SWGVL 548
Score = 81 (33.6 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 140 VTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVWL 184
Score = 80 (33.2 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 103 PQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDH 161
P D +T VS+ A ++P++ + S F+RT +Q E++
Sbjct: 13 PNDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRV 72
Query: 162 YGWREVIAIYVDDDHGRNGIAALGDTLAAKR 192
+ W VI I DD GR L +TL +R
Sbjct: 73 FNWNHVILIVSDDHEGRAAQKKL-ETLLEER 102
Score = 43 (20.2 bits), Expect = 2.1e-09, Sum P(4) = 2.1e-09
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 630 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 679
>UNIPROTKB|Q13003 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0007215 "glutamate receptor signaling
pathway" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042391 "regulation of membrane potential"
evidence=ISS;IDA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISS;IDA] [GO:0030424 "axon" evidence=ISS]
[GO:0032839 "dendrite cytoplasm" evidence=ISS] [GO:0043195
"terminal bouton" evidence=ISS] [GO:0043204 "perikaryon"
evidence=ISS] [GO:0007216 "G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS;IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005887 EMBL:CH471059
GO:GO:0051967 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 DrugBank:DB00142 GO:GO:0042391
GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH EMBL:U16127 EMBL:U16128 EMBL:AL355386
EMBL:AC117945 EMBL:S69349 IPI:IPI00011397 PIR:I59604
RefSeq:NP_000822.2 UniGene:Hs.128848 ProteinModelPortal:Q13003
SMR:Q13003 STRING:Q13003 PhosphoSite:Q13003 DMDM:212276502
PaxDb:Q13003 PRIDE:Q13003 DNASU:2899 Ensembl:ENST00000373091
GeneID:2899 KEGG:hsa:2899 UCSC:uc001caz.2 CTD:2899
GeneCards:GC01M037261 H-InvDB:HIX0028621 HGNC:HGNC:4581
HPA:HPA014709 MIM:138243 neXtProt:NX_Q13003 PharmGKB:PA28975
InParanoid:Q13003 KO:K05203 OMA:EEQAFRF PhylomeDB:Q13003
BindingDB:Q13003 ChEMBL:CHEMBL3684 GenomeRNAi:2899 NextBio:11475
ArrayExpress:Q13003 Bgee:Q13003 CleanEx:HS_GRIK3
Genevestigator:Q13003 GermOnline:ENSG00000163873 GO:GO:0001640
Uniprot:Q13003
Length = 919
Score = 171 (65.3 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 478 VSFREFV-SVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRL 533
V FR+ ++ G++ G+CID+ ++L ++ +L+ +G + +V+
Sbjct: 447 VMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKE 506
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW 592
+ D AV + I R K DF++P++ G+ ++ + + ++FL+P +P +W
Sbjct: 507 LIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIW 566
Query: 593 GVTAIFFLAVGAVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHK 641
+ +L V V++++ + D P +VV T+ FWF ++
Sbjct: 567 MYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGS 626
Query: 642 EKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
E AL R SSYTA+L + LTV+++ SPI D L
Sbjct: 627 ELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 148 (57.2 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 674 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTAD 733
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 734 YALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 794 IMKEKWWRGSGCPEEENK 811
Score = 139 (54.0 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 61/245 (24%), Positives = 101/245 (41%)
Query: 27 GRPSVVNIGALLSFS----TNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
G P V+ IG + ++ V + A + + + +N + T L T L +Q + H
Sbjct: 31 GMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHD 90
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + VAI GP ++ V + N L+VP + L + ++
Sbjct: 91 SFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFY 149
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA-P 200
V AI ++V + WR +Y DD G + L +A R I K
Sbjct: 150 VNLYPDYASLSHAILDLVQYLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIRQ 206
Query: 201 LSVEATEDEITDLLVKVAL-TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWL 259
L +++ D+ LL ++ E RII +H + A +GM+ Y +I T+
Sbjct: 207 LPIDS--DDSRPLLKEMKRGREFRIIFDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLD 263
Query: 260 STALD 264
ALD
Sbjct: 264 LYALD 268
Score = 67 (28.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 67/279 (24%), Positives = 109/279 (39%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKA-PLSVEATEDEITDLLVKVAL-TESRII 225
A V DD G+ L + + A R I K L +++ D+ LL ++ E RII
Sbjct: 175 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIRQLPIDS--DDSRPLLKEMKRGREFRII 230
Query: 226 VVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRT 285
+H + A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 231 FDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNV 287
Query: 286 YTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSF 345
P + +W P GL G D LL A++ ++ +
Sbjct: 288 DNPHV---SAIVEKWSMERLQAAPRSESGL-LDGVMMTDAA-LLYDAVHIV-----SVCY 337
Query: 346 SKDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YE 402
+ +++ +Q H R + R GG + + I +A G G FN L +
Sbjct: 338 QRAPQMTVNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393
Query: 403 IINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
II++ G ++G WS GL++ E + PN + S
Sbjct: 394 IISLKEDGLEKVGVWSPADGLNIT--EVAKGRGPNVTDS 430
Score = 37 (18.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRI 804
F + S L D I+ L E+G L+++
Sbjct: 380 FNKTSGLRTDFDLDIISLKEDG-LEKV 405
>RGD|68368 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA;ISO] [GO:0010975 "regulation of neuron projection
development" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA;ISO;IPI]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA;ISO]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA;ISO]
[GO:0043197 "dendritic spine" evidence=IEA;ISO] [GO:0043523
"regulation of neuron apoptotic process" evidence=IEA;ISO]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA;ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA;ISO]
[GO:0060134 "prepulse inhibition" evidence=IEA;ISO] [GO:0097110
"scaffold protein binding" evidence=IEA;ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68368 GO:GO:0014069 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895 KO:K05207
OrthoDB:EOG4SBDX4 OMA:CSFYTVG EMBL:Z17239 EMBL:U08256
IPI:IPI00206854 PIR:S28858 RefSeq:NP_077355.1 RefSeq:XP_003749821.1
UniGene:Rn.10046 PDB:2V3T PDB:2V3U PDBsum:2V3T PDBsum:2V3U
ProteinModelPortal:Q63226 SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054
STRING:Q63226 PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304
GeneID:79220 KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 256 (95.2 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 196/881 (22%), Positives = 350/881 (39%)
Query: 10 MIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGT 69
++F+ + R T + S+++IGA+ F + K ++ + AV D+N + L
Sbjct: 6 LLFFLSFWWSR-TWDLATSDSIIHIGAI--FDESAKKDDEV-FRTAVGDLNQNEEILQTE 61
Query: 70 KLKLQMQ--DCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFS 127
K+ + D N+ F A+ EA LM +A++ ++ + +A+ + +P L F
Sbjct: 62 KITFSVTFVDGNNP-FQAVQEACELMNQGILALVSSIGCTSAGSLQSLADAMHIPHL-FI 119
Query: 128 ATDPTLSSLQFPYFVRTTQSDQYQMAA---------IAEIVDHYGWREVIAIYVDDDHGR 178
+ R+ ++D Y ++ I +V Y W++ I Y D ++
Sbjct: 120 QRSTAGTPRSGCGLTRSNRNDDYTLSVRPPVYLNEVILRVVTEYAWQKFIIFY-DSEYDI 178
Query: 179 NGIAALGDTLAAKRCRISFKAPLSVEATEDE-ITDLLVKVALTESRIIVVHTHYNRGPVV 237
GI D ++ + ++ + VE ++ IT L + + E + R +V
Sbjct: 179 RGIQEFLDKVSQQGMDVALQ---KVENNINKMITTLFDTMRIEE--LNRYRDTLRRAILV 233
Query: 238 FHVA---QYLG-MLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTL--RTY-TPDS 290
+ A ++ ++ T V W+ + N +++ G LT+ +T+ P +
Sbjct: 234 MNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPVPQN 293
Query: 291 VLKRKFISRWR---NLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSK 347
+ +R F R L D K P + Y YDTV LLA N+F K+ + +
Sbjct: 294 ISQRCFRGNHRISSTLCDPKDPFAQ-NMEISNLYIYDTVLLLA---NAFHKKLEDRKWHS 349
Query: 348 DSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINV- 406
+ LS I R +S + + GG + ++I + + G G F +G N +EI+
Sbjct: 350 MASLSCI----RKNS-KPWQGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGTN 404
Query: 407 ----IGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTT-QKPRGW 461
+G G R++G W+ +GL+ +L K + +N R V+ T ++P
Sbjct: 405 YGEELGRGVRKLGCWNPVTGLN----GSLTDK---KLENNMR--GVVLRVVTVLEEPFVM 455
Query: 462 VFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG 521
V N +G P + + GF +++ A + Y P + DG
Sbjct: 456 VSENV-----LGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQE-----DG 503
Query: 522 HNNPSCTELV-RLITAGVYDAAVGDIA--IITNRTKMADFTQPYI----ESGLVVVAPVR 574
N ELV + G+ + ++ T+ D++ + E + + A +
Sbjct: 504 TWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLA 563
Query: 575 KLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFS 634
D + WA ++ G + L V + W+ RL + + WF +
Sbjct: 564 PFDLSLWACIA-------GTVLLVGLLVYLLNWLNPPRL--QMGSMTSTTLYNSMWFVYG 614
Query: 635 TMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RS 692
+ E + L R SSYTA+L + LT+ ++ S I+ + L +
Sbjct: 615 SFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQ 674
Query: 693 SNYPIG-------YQ------VNSFARNYLVDEL--NIDESRLVPLNSPEEYAKALKDGP 737
++ P G YQ +N F R+ + ++ I+ S N E A K
Sbjct: 675 TDIPYGTVLDSAVYQHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKV-- 732
Query: 738 HKGGVAAVVDDRAYAELFL--STRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKL 795
K G A V D A E C F VG G+G A SP S IL+L
Sbjct: 733 -KYGNYAFVWDAAVLEYVAINDPDCSFYTVGNTVADRGYGIALQHGSPYRDVFSQRILEL 791
Query: 796 SENGDLQRIHDKWLLRSA-C---SSQGAKLDVDRLQLKSFS 832
++GD+ + KW ++ C SS AK L +KS +
Sbjct: 792 QQSGDMDILKHKWWPKNGQCDLYSSVDAKQKGGALDIKSLA 832
>UNIPROTKB|Q63226 [details] [associations]
symbol:Grid2 "Glutamate receptor ionotropic, delta-2"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:68368 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0060079 GO:GO:0060134 GO:GO:0035249 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:Z17239 EMBL:U08256 IPI:IPI00206854 PIR:S28858
RefSeq:NP_077355.1 RefSeq:XP_003749821.1 UniGene:Rn.10046 PDB:2V3T
PDB:2V3U PDBsum:2V3T PDBsum:2V3U ProteinModelPortal:Q63226
SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054 STRING:Q63226
PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304 GeneID:79220
KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 256 (95.2 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 196/881 (22%), Positives = 350/881 (39%)
Query: 10 MIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGT 69
++F+ + R T + S+++IGA+ F + K ++ + AV D+N + L
Sbjct: 6 LLFFLSFWWSR-TWDLATSDSIIHIGAI--FDESAKKDDEV-FRTAVGDLNQNEEILQTE 61
Query: 70 KLKLQMQ--DCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFS 127
K+ + D N+ F A+ EA LM +A++ ++ + +A+ + +P L F
Sbjct: 62 KITFSVTFVDGNNP-FQAVQEACELMNQGILALVSSIGCTSAGSLQSLADAMHIPHL-FI 119
Query: 128 ATDPTLSSLQFPYFVRTTQSDQYQMAA---------IAEIVDHYGWREVIAIYVDDDHGR 178
+ R+ ++D Y ++ I +V Y W++ I Y D ++
Sbjct: 120 QRSTAGTPRSGCGLTRSNRNDDYTLSVRPPVYLNEVILRVVTEYAWQKFIIFY-DSEYDI 178
Query: 179 NGIAALGDTLAAKRCRISFKAPLSVEATEDE-ITDLLVKVALTESRIIVVHTHYNRGPVV 237
GI D ++ + ++ + VE ++ IT L + + E + R +V
Sbjct: 179 RGIQEFLDKVSQQGMDVALQ---KVENNINKMITTLFDTMRIEE--LNRYRDTLRRAILV 233
Query: 238 FHVA---QYLG-MLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTL--RTY-TPDS 290
+ A ++ ++ T V W+ + N +++ G LT+ +T+ P +
Sbjct: 234 MNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPVPQN 293
Query: 291 VLKRKFISRWR---NLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSK 347
+ +R F R L D K P + Y YDTV LLA N+F K+ + +
Sbjct: 294 ISQRCFRGNHRISSTLCDPKDPFAQ-NMEISNLYIYDTVLLLA---NAFHKKLEDRKWHS 349
Query: 348 DSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINV- 406
+ LS I R +S + + GG + ++I + + G G F +G N +EI+
Sbjct: 350 MASLSCI----RKNS-KPWQGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGTN 404
Query: 407 ----IGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTT-QKPRGW 461
+G G R++G W+ +GL+ +L K + +N R V+ T ++P
Sbjct: 405 YGEELGRGVRKLGCWNPVTGLN----GSLTDK---KLENNMR--GVVLRVVTVLEEPFVM 455
Query: 462 VFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG 521
V N +G P + + GF +++ A + Y P + DG
Sbjct: 456 VSENV-----LGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQE-----DG 503
Query: 522 HNNPSCTELV-RLITAGVYDAAVGDIA--IITNRTKMADFTQPYI----ESGLVVVAPVR 574
N ELV + G+ + ++ T+ D++ + E + + A +
Sbjct: 504 TWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLA 563
Query: 575 KLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFS 634
D + WA ++ G + L V + W+ RL + + WF +
Sbjct: 564 PFDLSLWACIA-------GTVLLVGLLVYLLNWLNPPRL--QMGSMTSTTLYNSMWFVYG 614
Query: 635 TMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RS 692
+ E + L R SSYTA+L + LT+ ++ S I+ + L +
Sbjct: 615 SFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQ 674
Query: 693 SNYPIG-------YQ------VNSFARNYLVDEL--NIDESRLVPLNSPEEYAKALKDGP 737
++ P G YQ +N F R+ + ++ I+ S N E A K
Sbjct: 675 TDIPYGTVLDSAVYQHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKV-- 732
Query: 738 HKGGVAAVVDDRAYAELFL--STRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKL 795
K G A V D A E C F VG G+G A SP S IL+L
Sbjct: 733 -KYGNYAFVWDAAVLEYVAINDPDCSFYTVGNTVADRGYGIALQHGSPYRDVFSQRILEL 791
Query: 796 SENGDLQRIHDKWLLRSA-C---SSQGAKLDVDRLQLKSFS 832
++GD+ + KW ++ C SS AK L +KS +
Sbjct: 792 QQSGDMDILKHKWWPKNGQCDLYSSVDAKQKGGALDIKSLA 832
>UNIPROTKB|D4ACE2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00231401
ProteinModelPortal:D4ACE2 Ensembl:ENSRNOT00000002142
ArrayExpress:D4ACE2 Uniprot:D4ACE2
Length = 834
Score = 183 (69.5 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 387 GNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVA 446
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 447 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 506
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 507 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 566
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 567 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 605
Score = 143 (55.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 55/238 (23%), Positives = 94/238 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 504 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 563
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 564 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 623
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 624 FFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 683
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 684 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK 741
Score = 125 (49.1 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 77/365 (21%), Positives = 146/365 (40%)
Query: 69 TKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFS 127
T L +Q N F A A + A+ GP + + V + N L+VP +
Sbjct: 4 TTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTR 63
Query: 128 ATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDT 187
P++ S +++ A+ ++V +Y W+ V +Y D G+ L +
Sbjct: 64 WKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS----TGLIRLQEL 118
Query: 188 LAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ A R I K A +D LL ++ ++ ++ + + ++GM
Sbjct: 119 IKAPSRYNIKIKIRQLPPANKDA-KPLLKEMKKSKEFYVIFDCSHETAAEILKQILFMGM 177
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKFISRWRNLT 304
+ Y + T+ ALD S V ++ G L P S++++ + R +
Sbjct: 178 MTEYYHYFFTTLDLFALDLELYRYSGV--NMTGFRLLNIDNPHVSSIIEKWSMERLQ--A 233
Query: 305 DAKTPNGYIG--LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
+ G + + YD V+++A A + + L+ +S +Q H R
Sbjct: 234 PPRPETGLLDGMMTTEAALMYDAVYMVAIASH----RASQLT------VSSLQCH-RHKP 282
Query: 363 LRIF-NGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YEIINVIGTGYRRIGYWSNY 420
R+ NL++++ +A G G FN L +II++ G +IG W++
Sbjct: 283 WRLGPRFMNLIKEA--RARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSN 340
Query: 421 SGLSV 425
SGL++
Sbjct: 341 SGLNM 345
>UNIPROTKB|F1P2J8 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 OMA:VYRSAAM EMBL:AADN02026958 IPI:IPI00639787
ProteinModelPortal:F1P2J8 Ensembl:ENSGALT00000040370 Uniprot:F1P2J8
Length = 901
Score = 194 (73.4 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 66/299 (22%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 439 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 498
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 499 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 558
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 559 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 617
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 618 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 676
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S AILK ENG ++ + W+ C S+
Sbjct: 677 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSR 735
Score = 113 (44.8 bits), Expect = 2.6e-09, Sum P(4) = 2.6e-09
Identities = 75/365 (20%), Positives = 146/365 (40%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ F+ K++ +G + +
Sbjct: 199 PDGVIGLQLINGKNESAHISDAVAVVAQAVHDLFE--------KENITDPPRGCV--GNT 248
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + + G G FN GD Y I+N+ ++G ++ +
Sbjct: 249 NIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNV 308
Query: 423 LS----VVRPETLYSKPPNRSSS--------NQRLYSVIWPGQTTQKPRGWVFPNNGRHL 470
L+ ++ P KP S +Q + + P Q R F NG +
Sbjct: 309 LTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTCRE-EFTINGDPV 367
Query: 471 R---IGVPNR-VSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGH- 522
+ PN + R V++ GFCID+ ++ + L+ FG
Sbjct: 368 KKVFCTGPNETIPGRPTVAL----CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 523 -NNPSCTE---LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDS 578
NN + E ++ + +G D V + I R + +F++P+ GL ++ S
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRS 483
Query: 579 NAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWF 631
+F+ PF +W + + V ++++L+ ++N E + + WF
Sbjct: 484 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 543
Query: 632 SFSTM 636
S+ +
Sbjct: 544 SWGVL 548
Score = 81 (33.6 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 210 ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
+T LL++ E+R+I++ + V+ A L M G+GYVW+
Sbjct: 140 VTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVWL 184
Score = 80 (33.2 bits), Expect = 6.9e-18, Sum P(3) = 6.9e-18
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 103 PQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPY-FVRTTQSDQYQMAAIAEIVDH 161
P D +T VS+ A ++P++ + S F+RT +Q E++
Sbjct: 13 PNDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRV 72
Query: 162 YGWREVIAIYVDDDHGRNGIAALGDTLAAKR 192
+ W VI I DD GR L +TL +R
Sbjct: 73 FNWNHVILIVSDDHEGRAAQKKL-ETLLEER 102
Score = 43 (20.2 bits), Expect = 2.6e-09, Sum P(4) = 2.6e-09
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 630 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 679
>UNIPROTKB|F1P9T1 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AAEX03016479
Ensembl:ENSCAFT00000013975 Uniprot:F1P9T1
Length = 879
Score = 184 (69.8 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 432 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVA 491
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 492 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 551
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 552 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 611
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 612 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 650
Score = 143 (55.4 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 55/238 (23%), Positives = 94/238 (39%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 549 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 608
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 609 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 668
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 669 FFKKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 728
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAK 820
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K
Sbjct: 729 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK 786
Score = 123 (48.4 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 79/395 (20%), Positives = 154/395 (38%)
Query: 47 VAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQD 105
V +LA K AV +N + T + T L +Q N F A A + A+ GP
Sbjct: 14 VEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSH 73
Query: 106 AVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWR 165
+ + V + N L+VP + P++ + +++ A+ ++V +Y W+
Sbjct: 74 SSSVSAVQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAVLDLVLYYNWK 132
Query: 166 EVIAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRI 224
V +Y D G+ L + + A R I K +D LL ++ +
Sbjct: 133 TVTLVYEDS----TGLIRLQELIKAPSRYNIKIKIRQLPSGNKDA-KPLLKEMKKGKEFY 187
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLR 284
++ + + ++GM+ Y + T+ ALD S V ++ G L
Sbjct: 188 VIFDCSHGTAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV--NMTGFRLLN 245
Query: 285 TYTP--DSVLKRKFISRWRNLTDAKTPNGYIG--LNAYGFYAYDTVWLLARAIN------ 334
P S++++ + R + + G + + YD V+++A A +
Sbjct: 246 IDNPHVSSIIEKWSMERLQ--APPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLT 303
Query: 335 -SFFKQGGNLSFSKDSRLSDIQGHLRLDSL--RI-FNGGNLLRDSILQANMTGTAGPARF 390
S + + + R ++ R D L RI FN + LR ++
Sbjct: 304 VSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDF-DLDIISLKEEGTE 362
Query: 391 NSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
+ G++ Y++ +++IG W++ SGL++
Sbjct: 363 KAAGEVSKHLYKV-------WKKIGIWNSNSGLNM 390
>UNIPROTKB|F1MCW8 [details] [associations]
symbol:F1MCW8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0042734
GO:GO:0030288 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 EMBL:DAAA02040526
EMBL:DAAA02040527 IPI:IPI00842735 Ensembl:ENSBTAT00000022788
OMA:FATICRI Uniprot:F1MCW8
Length = 751
Score = 148 (57.2 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 54/192 (28%), Positives = 86/192 (44%)
Query: 514 KLIPFGDGHN-NPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAP 572
K +P H P T L A D AV + I R K+ DF++P++ G+ ++
Sbjct: 384 KCVPVPPSHGATPLMTSLCSFQKA---DLAVAGLTITAEREKVIDFSKPFMTLGISILYR 440
Query: 573 VRK-LDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGP-PKRQ-----V 625
V ++FL PF+P +W + +LAV V++++ E+ P P Q +
Sbjct: 441 VHMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLL 500
Query: 626 VTIFWFSFSTMF----FAHKEKTVS--ALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQ 678
V + S F F + T++ AL R SSYTA+L + LTVQ
Sbjct: 501 VNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 560
Query: 679 KLSSPIKGIDSL 690
++ PI+ +D L
Sbjct: 561 RMDVPIESVDDL 572
Score = 120 (47.3 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYLVDELNIDESRL-- 720
SSYTA+L + LTVQ++ PI+ +D L I Y + + + R+
Sbjct: 547 SSYTANLAAFLTVQRMDVPIESVDDLADQT-AIEYGTIHGGSSMTFFQNSRYQTYQRMWN 605
Query: 721 -VPLNSPEEYAKALKDGPHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
+ P + K+ ++G + A + + E + C + +G + G+G
Sbjct: 606 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIG 665
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
P S + AIL+L EN L+ + KW C +
Sbjct: 666 MPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE 705
Score = 84 (34.6 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 40/176 (22%), Positives = 74/176 (42%)
Query: 98 VAIIGPQDA-VTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTT--QSDQYQMAA 154
VA++GP + +S ++S++ E +VP F QF F S+ A
Sbjct: 10 VAVLGPSSSPASSSIISNICGEKEVP--HFKVAPEEFIKFQFQRFTTLNLHPSNTDISVA 67
Query: 155 IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED--EITD 212
+A +++ + I + N L L ++ IS K LSV +D + T
Sbjct: 68 VAGVLNFFNCTTACLICAKAECLLN----LEKLL--RQFLIS-KDTLSVRMLDDARDPTP 120
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSP 268
LL ++ ++ I++H + + + A LGM+ Y +I T+ + + P
Sbjct: 121 LLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLTVSLIRVTDP 176
>RGD|71027 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IEA;ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005887
"integral to plasma membrane" evidence=IEA;ISO] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=ISO] [GO:0007215 "glutamate receptor
signaling pathway" evidence=ISO] [GO:0007216 "G-protein coupled
glutamate receptor signaling pathway" evidence=ISO] [GO:0007268
"synaptic transmission" evidence=NAS] [GO:0008066 "glutamate
receptor activity" evidence=IDA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA;ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0032839 "dendrite cytoplasm" evidence=IDA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2 UniGene:Rn.92477
PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94 PDB:4E0W PDB:4G8N
PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93 PDBsum:3U94
PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264 SMR:P42264
STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 171 (65.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 478 VSFREFV-SVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRL 533
V FR+ ++ G++ G+CID+ ++L ++ +L+ +G + +V+
Sbjct: 447 VMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKE 506
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW 592
+ D AV + I R K DF++P++ G+ ++ + + ++FL+P +P +W
Sbjct: 507 LIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIW 566
Query: 593 GVTAIFFLAVGAVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHK 641
+ +L V V++++ + D P +VV T+ FWF ++
Sbjct: 567 MYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGS 626
Query: 642 EKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
E AL R SSYTA+L + LTV+++ SPI D L
Sbjct: 627 ELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 147 (56.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 674 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTAD 733
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 734 YALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 794 IMKEKWWRGSGCPEEENK 811
Score = 136 (52.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 61/245 (24%), Positives = 100/245 (40%)
Query: 27 GRPSVVNIGALLSFS----TNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
G P V+ IG + ++ V + A + + + +N + T L T L +Q + H
Sbjct: 31 GMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHD 90
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + VAI GP ++ V + N L+VP + L + ++
Sbjct: 91 SFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFY 149
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA-P 200
V AI ++V WR +Y DD G + L +A R I K
Sbjct: 150 VNLYPDYASLSHAILDLVQSLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIRQ 206
Query: 201 LSVEATEDEITDLLVKVAL-TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWL 259
L +++ D+ LL ++ E RII +H + A +GM+ Y +I T+
Sbjct: 207 LPIDS--DDSRPLLKEMKRGREFRIIFDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLD 263
Query: 260 STALD 264
ALD
Sbjct: 264 LYALD 268
Score = 72 (30.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 68/279 (24%), Positives = 110/279 (39%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKA-PLSVEATEDEITDLLVKVAL-TESRII 225
A V DD G+ L + + A R I K L +++ D+ LL ++ E RII
Sbjct: 175 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIRQLPIDS--DDSRPLLKEMKRGREFRII 230
Query: 226 VVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRT 285
+H + A +GM+ Y +I T+ ALD S V ++ G R
Sbjct: 231 FDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTG---FRI 284
Query: 286 YTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSF 345
D+ + +W P GL G D LL A++ ++ +
Sbjct: 285 LNVDNAHVSAIVEKWSMERLQAAPRAESGL-LDGVMMTDAA-LLYDAVHIV-----SVCY 337
Query: 346 SKDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YE 402
+ S+++ +Q H R R GG + + I +A G G FN L +
Sbjct: 338 QRASQMTVNSLQCH-RHKPWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393
Query: 403 IINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
II++ G ++G WS GL++ E + PN + S
Sbjct: 394 IISLKEDGLEKVGVWSPADGLNIT--EVAKGRGPNVTDS 430
>UNIPROTKB|P42264 [details] [associations]
symbol:Grik3 "Glutamate receptor ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2
UniGene:Rn.92477 PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94
PDB:4E0W PDB:4G8N PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93
PDBsum:3U94 PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264
SMR:P42264 STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 171 (65.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 478 VSFREFV-SVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRL 533
V FR+ ++ G++ G+CID+ ++L ++ +L+ +G + +V+
Sbjct: 447 VMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKE 506
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW 592
+ D AV + I R K DF++P++ G+ ++ + + ++FL+P +P +W
Sbjct: 507 LIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIW 566
Query: 593 GVTAIFFLAVGAVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHK 641
+ +L V V++++ + D P +VV T+ FWF ++
Sbjct: 567 MYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGS 626
Query: 642 EKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
E AL R SSYTA+L + LTV+++ SPI D L
Sbjct: 627 ELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 147 (56.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 674 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTAD 733
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 734 YALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 794 IMKEKWWRGSGCPEEENK 811
Score = 136 (52.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 61/245 (24%), Positives = 100/245 (40%)
Query: 27 GRPSVVNIGALLSFS----TNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
G P V+ IG + ++ V + A + + + +N + T L T L +Q + H
Sbjct: 31 GMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHD 90
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + VAI GP ++ V + N L+VP + L + ++
Sbjct: 91 SFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFY 149
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA-P 200
V AI ++V WR +Y DD G + L +A R I K
Sbjct: 150 VNLYPDYASLSHAILDLVQSLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIRQ 206
Query: 201 LSVEATEDEITDLLVKVAL-TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWL 259
L +++ D+ LL ++ E RII +H + A +GM+ Y +I T+
Sbjct: 207 LPIDS--DDSRPLLKEMKRGREFRIIFDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLD 263
Query: 260 STALD 264
ALD
Sbjct: 264 LYALD 268
Score = 72 (30.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 68/279 (24%), Positives = 110/279 (39%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKA-PLSVEATEDEITDLLVKVAL-TESRII 225
A V DD G+ L + + A R I K L +++ D+ LL ++ E RII
Sbjct: 175 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIRQLPIDS--DDSRPLLKEMKRGREFRII 230
Query: 226 VVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRT 285
+H + A +GM+ Y +I T+ ALD S V ++ G R
Sbjct: 231 FDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTG---FRI 284
Query: 286 YTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSF 345
D+ + +W P GL G D LL A++ ++ +
Sbjct: 285 LNVDNAHVSAIVEKWSMERLQAAPRAESGL-LDGVMMTDAA-LLYDAVHIV-----SVCY 337
Query: 346 SKDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YE 402
+ S+++ +Q H R R GG + + I +A G G FN L +
Sbjct: 338 QRASQMTVNSLQCH-RHKPWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393
Query: 403 IINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
II++ G ++G WS GL++ E + PN + S
Sbjct: 394 IISLKEDGLEKVGVWSPADGLNIT--EVAKGRGPNVTDS 430
>MGI|MGI:95816 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10090 "Mus musculus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007196 "adenylate
cyclase-inhibiting G-protein coupled glutamate receptor signaling
pathway" evidence=ISO] [GO:0007215 "glutamate receptor signaling
pathway" evidence=ISO] [GO:0007216 "G-protein coupled glutamate
receptor signaling pathway" evidence=ISO] [GO:0008066 "glutamate
receptor activity" evidence=ISO] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95816 GO:GO:0005886
GO:GO:0005887 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 GO:GO:0042391 GO:GO:0032839
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203
OMA:EEQAFRF GO:GO:0001640 EMBL:AL607090 EMBL:AL627328 EMBL:BC118004
EMBL:AF245444 IPI:IPI00120318 IPI:IPI00986627 RefSeq:NP_001074566.1
UniGene:Mm.40896 ProteinModelPortal:B1AS29 SMR:B1AS29 STRING:B1AS29
PaxDb:B1AS29 PRIDE:B1AS29 DNASU:14807 Ensembl:ENSMUST00000030676
GeneID:14807 KEGG:mmu:14807 UCSC:uc008usa.2 InParanoid:B1AS29
ChiTaRS:GRIK3 NextBio:286987 Bgee:B1AS29 Genevestigator:B1AS29
Uniprot:B1AS29
Length = 919
Score = 171 (65.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 56/230 (24%), Positives = 105/230 (45%)
Query: 478 VSFREFV-SVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRL 533
V FR+ ++ G++ G+CID+ ++L ++ +L+ +G + +V+
Sbjct: 447 VMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKE 506
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW 592
+ D AV + I R K DF++P++ G+ ++ + + ++FL+P +P +W
Sbjct: 507 LIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIW 566
Query: 593 GVTAIFFLAVGAVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHK 641
+ +L V V++++ + D P +VV T+ FWF ++
Sbjct: 567 MYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGS 626
Query: 642 EKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
E AL R SSYTA+L + LTV+++ SPI D L
Sbjct: 627 ELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 147 (56.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 674 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTAD 733
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 734 YALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 794 IMKEKWWRGSGCPEEENK 811
Score = 136 (52.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 61/245 (24%), Positives = 100/245 (40%)
Query: 27 GRPSVVNIGALLSFS----TNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
G P V+ IG + ++ V + A + + + +N + T L T L +Q + H
Sbjct: 31 GMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHD 90
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + VAI GP ++ V + N L+VP + L + ++
Sbjct: 91 SFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFY 149
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA-P 200
V AI ++V WR +Y DD G + L +A R I K
Sbjct: 150 VNLYPDYASLSHAILDLVQSLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIRQ 206
Query: 201 LSVEATEDEITDLLVKVAL-TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWL 259
L +++ D+ LL ++ E RII +H + A +GM+ Y +I T+
Sbjct: 207 LPIDS--DDSRPLLKEMKRGREFRIIFDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLD 263
Query: 260 STALD 264
ALD
Sbjct: 264 LYALD 268
Score = 67 (28.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 67/279 (24%), Positives = 109/279 (39%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKA-PLSVEATEDEITDLLVKVAL-TESRII 225
A V DD G+ L + + A R I K L +++ D+ LL ++ E RII
Sbjct: 175 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIRQLPIDS--DDSRPLLKEMKRGREFRII 230
Query: 226 VVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRT 285
+H + A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 231 FDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNV 287
Query: 286 YTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSF 345
P + +W P GL G D LL A++ ++ +
Sbjct: 288 DNPHV---SAIVEKWAMERLQAAPRAESGL-LDGVMMTDAA-LLYDAVHIV-----SVCY 337
Query: 346 SKDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YE 402
+ +++ +Q H R + R GG + + I +A G G FN L +
Sbjct: 338 QRAPQMTVNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393
Query: 403 IINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
II++ G ++G WS GL++ E + PN + S
Sbjct: 394 IISLKEDGLEKVGVWSPADGLNIT--EVAKGRGPNVTDS 430
>UNIPROTKB|F1PWT6 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203 EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 RefSeq:XP_850331.3 Ensembl:ENSCAFT00000005371
GeneID:608269 KEGG:cfa:608269 Uniprot:F1PWT6
Length = 919
Score = 169 (64.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 52/219 (23%), Positives = 99/219 (45%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+CID+ ++L ++ +L+ +G + +++ + D AV
Sbjct: 458 GNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVA 517
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K DF++P++ G+ ++ + + ++FL+P +P +W + +L V
Sbjct: 518 PLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVS 577
Query: 604 AVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ + D P +VV T+ FWF ++ E AL R
Sbjct: 578 CVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRI 637
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 638 IGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 146 (56.5 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 674 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTAD 733
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 734 YALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 794 IMKEKWWRGSGCPEEENK 811
Score = 138 (53.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 60/244 (24%), Positives = 98/244 (40%)
Query: 27 GRPSVVNIGALLSFS----TNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HS 81
G P V+ IG + ++ V + A + + + +N + T L T L +Q + H
Sbjct: 31 GMPHVIRIGGIFEYADGPNAQVMNAEEHAFRFSANIINRNRTLLPNTTLTYDIQRIHFHD 90
Query: 82 GFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYF 141
F A +A + VAI GP ++ V + N L+VP + L + ++
Sbjct: 91 SFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFY 149
Query: 142 VRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPL 201
V AI ++V + WR +Y DD G + L +A R I K
Sbjct: 150 VNLYPDYASLSHAILDLVQYLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIR- 205
Query: 202 SVEATEDEITDLLVKVAL-TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLS 260
+ D+ LL ++ E RII +H + A +GM+ Y +I T+
Sbjct: 206 QLPLDSDDSRPLLKEMKRGREFRIIFDCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDL 264
Query: 261 TALD 264
ALD
Sbjct: 265 YALD 268
Score = 66 (28.3 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 66/278 (23%), Positives = 106/278 (38%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVAL-TESRIIV 226
A V DD G+ L + + A R I K + D+ LL ++ E RII
Sbjct: 175 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIR-QLPLDSDDSRPLLKEMKRGREFRIIF 231
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+H + A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 232 DCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNVD 288
Query: 287 TPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFS 346
P + +W P GL G D LL A++ ++ +
Sbjct: 289 NPHV---SAIVEKWSMERLQAAPRAESGL-LDGVMMTDAA-LLYDAVHIV-----SVCYQ 338
Query: 347 KDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YEI 403
+ +++ +Q H R + R GG + + I +A G G FN L +I
Sbjct: 339 RAPQMTVNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 394
Query: 404 INVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
I++ G ++G WS GL++ E + PN + S
Sbjct: 395 ISLKEDGLEKVGVWSPAEGLNIT--EVAKGRGPNVTDS 430
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRI 804
F + S L D I+ L E+G L+++
Sbjct: 380 FNKTSGLRTDFDLDIISLKEDG-LEKV 405
>UNIPROTKB|B7Z1W1 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AC010613
EMBL:AC025156 EMBL:AC091960 EMBL:AC091962 UniGene:Hs.519693
UniGene:Hs.737709 HGNC:HGNC:4571 HOVERGEN:HBG051839 EMBL:AK294011
IPI:IPI00956375 SMR:B7Z1W1 STRING:B7Z1W1 Ensembl:ENST00000537037
Uniprot:B7Z1W1
Length = 716
Score = 165 (63.1 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 66/267 (24%), Positives = 114/267 (42%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDL 213
A+ I+DHY W++ + IY D D G + + + DT A K +++ A + TE+ L
Sbjct: 86 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVT--AVNILTTTEEGYRML 142
Query: 214 LVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDV 273
+ + R++VV R + L G GY +I + +D N S
Sbjct: 143 FQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESGA 202
Query: 274 MDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAK--TPNGYIGLNAYGFYAYDTVWLLAR 331
++ G L YT D++ K + +W+N +DA+ T + YD V ++A
Sbjct: 203 --NVTG-FQLVNYT-DTI-PAKIMQQWKN-SDARDHTRVDWKRPKYTSALTYDGVKVMAE 256
Query: 332 AINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN 391
A S +Q + S+ D + + + G ++ ++ Q G G +FN
Sbjct: 257 AFQSLRRQ--RIDISRRGNAGDCLANPAVP----WGQGIDIQRALQQVRFEGLTGNVQFN 310
Query: 392 SHGDLINPAYEIINVIGTGYRRIGYWS 418
G N +I + G R+IGYW+
Sbjct: 311 EKGRRTNYTLHVIEMKHDGIRKIGYWN 337
Score = 135 (52.6 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 61/281 (21%), Positives = 110/281 (39%)
Query: 530 LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFT 588
+V + G D AV + I R ++ DF++P++ G+ +++ +K ++FL P
Sbjct: 431 MVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLA 490
Query: 589 PMMW--------GVTAIFFLA--VGAVVWILEH--RLNDEFRGPPKRQ--VVTIFWFSFS 634
+W GV+ + FL W E D+ + + WFS
Sbjct: 491 YEIWMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLG 550
Query: 635 TMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSS 693
+ + +L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 551 AFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQ 610
Query: 694 NYPIGY---QVNSFARNYLVDELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVA 743
I Y + S + ++ + E + S P + + ++G KG A
Sbjct: 611 T-EIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYA 669
Query: 744 AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPL 784
+++ + C+ VG G+G A P+ S L
Sbjct: 670 YLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSAL 710
Score = 105 (42.0 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 25/128 (19%), Positives = 61/128 (47%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTELVRLITAGVY---DAA 542
+G++ G+C+++ + Y+ +++ G G +P ++ VY D A
Sbjct: 384 EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVA 443
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLA 601
V + I R ++ DF++P++ G+ +++ +K ++FL P +W ++
Sbjct: 444 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 503
Query: 602 VGAVVWIL 609
V V++++
Sbjct: 504 VSVVLFLV 511
Score = 44 (20.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + AEI H G+ + I D +G NG+ +G+ L R ++ APL
Sbjct: 392 YCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGM--VGE-LVYGRADVAV-APL 447
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 448 TITLVREEVID 458
>FB|FBgn0264000 [details] [associations]
symbol:GluRIB "Glutamate receptor IB" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0006812 "cation
transport" evidence=ISS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0030054
GO:GO:0045211 GO:GO:0006812 InterPro:IPR001828 OrthoDB:EOG4WM38M
GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 HSSP:P19491
FlyBase:FBgn0264000 EMBL:AJ251886 EMBL:AJ251887 SMR:Q9TVG7
STRING:Q9TVG7 InParanoid:Q9TVG7 Uniprot:Q9TVG7
Length = 1095
Score = 140 (54.3 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 55/202 (27%), Positives = 88/202 (43%)
Query: 629 FWFSFSTMFFAHKEKTV-SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWFS + + + S GR SSYTA+L + LTV+++ +PI
Sbjct: 743 FWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSP 802
Query: 688 DSLRSSN---YPI---GYQVNSFAR------NYLVDELNIDESRLVPLNSPEEYAKALKD 735
+ L Y G + F R N + + +N + VP + +E K +++
Sbjct: 803 EDLAMQTEVQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVP--TYDEGIKRVRN 860
Query: 736 GPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKL 795
KG A +V+ + C+ VG+ G+G A P S L I+ A+L L
Sbjct: 861 S--KGKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINLAVLTL 918
Query: 796 SENGDLQRIHDKWLLRSA-CSS 816
ENG+L ++ +KW A CS+
Sbjct: 919 KENGELIKLRNKWWYEKAECST 940
Score = 114 (45.2 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 50/259 (19%), Positives = 112/259 (43%)
Query: 369 GNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINV-IGTGYRRIGYWSNYSGLSVVR 427
G+ + + + + G G +FN G +N ++ + + + ++ W++ +GL +
Sbjct: 423 GDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAGLQPLN 482
Query: 428 PETLYSKPPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVK 487
+ + +P N R Y V TT ++ L+ +V+F E +
Sbjct: 483 AKYVRLRPHVEFEKN-RTYIV-----TTVLEEPYIM------LK-----QVAFGE--KLH 523
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE-----LVRLITAGVYDAA 542
G+ G+C D+ L +L+ G+ + S +V + D A
Sbjct: 524 GNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADIA 583
Query: 543 VGDIAIITNRTKMADFTQPYIESGLVVVA--PVRKLDSNAWAFLSPFTPMMWGVTAIF-F 599
+ + I R ++ DF++P++ G+ ++ PV++ ++F++P + +W V+ IF +
Sbjct: 584 IAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPG-VFSFMNPLSQEIW-VSVIFSY 641
Query: 600 LAVGAVVWILEHRLNDEFR 618
+ V V++ + E+R
Sbjct: 642 IGVSIVLFFVSRFSPHEWR 660
Score = 97 (39.2 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 57/249 (22%), Positives = 102/249 (40%)
Query: 101 IGPQDAVTSHVVSHVANELQVPLLSFSATDPTLS-SLQFPYFVRTTQSDQYQMAAIAEIV 159
+ P T H S N Q+P ++ + L+ S F F + + D +Q AI + +
Sbjct: 111 VSPDSFDTLHSYS---NTFQMPFVTPWFPEKVLTPSSGFLDFALSMRPDYHQ--AIIDTI 165
Query: 160 DHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRC-RISFKAPL----SVEATEDEITDLL 214
YGWR++I +Y D H +G+ L R SF+ L S + E L
Sbjct: 166 QFYGWRKIIYLY--DSH--DGLLRLQQIYQGLRPGNESFQVELVKRISNVSMAIEFLHTL 221
Query: 215 VKVALTESRIIVVH--THYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
++ E++ IV+ T + ++ HV LG +L + L + + S+
Sbjct: 222 EQIGRFENKHIVLDCPTEMAKQILIQHVRDL--RLGRR----TYHYLLSGLVMDDRWESE 275
Query: 273 VMD-DIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPN-GYIGLNAYGFYAYDTVWLLA 330
+++ + R + L R+F W+ L + G ++A YD V++L
Sbjct: 276 IIEFGAINITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLV 335
Query: 331 RAINSFFKQ 339
A N ++
Sbjct: 336 EAFNKILRK 344
>UNIPROTKB|J9NWC8 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000044506 Uniprot:J9NWC8
Length = 730
Score = 191 (72.3 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 65/299 (21%), Positives = 128/299 (42%)
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWG 593
+ +G D V + I R + +F++P+ GL ++ S +F+ PF +W
Sbjct: 297 LLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWL 356
Query: 594 VTAIFFLAVGAVVWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV- 645
+ + V ++++L+ ++N E + + WFS+ + + +
Sbjct: 357 LVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAP 416
Query: 646 -SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSF 704
S R +SYTA+L + L + + I GI+ R N P + +
Sbjct: 417 RSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN-PSDKFIYAT 475
Query: 705 ARNYLVD---ELNIDES---RLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST 758
+ VD ++ S R + ++ E A+A++ + A + D A E S
Sbjct: 476 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ-AVRDNKLHAFIWDSAVLEFEASQ 534
Query: 759 RCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
+C+ G++F ++G+G +DSP ++S +ILK ENG ++ + W+ C S+
Sbjct: 535 KCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSR 593
Score = 96 (38.9 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 32/158 (20%), Positives = 65/158 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGH--NNPSCTE---LVRLITAGVYDAAVGD 545
GFCID+ + + L+ FG NN + E ++ + +G D V
Sbjct: 249 GFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAP 308
Query: 546 IAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
+ I R + +F++P+ GL ++ S +F+ PF +W + + V +
Sbjct: 309 LTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVM 368
Query: 606 VWILEH-------RLNDEFRGPPKRQVVTIFWFSFSTM 636
+++L+ ++N E + + WFS+ +
Sbjct: 369 LYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVL 406
Score = 70 (29.7 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 221 ESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWI 254
E+R+I++ + V+ A L M G+GYVW+
Sbjct: 7 EARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 40
Score = 70 (29.7 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 448 VIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLL 507
+IWPG T+KPRG+ L+I ++ FV VK + ++ G C + FT + +
Sbjct: 171 IIWPGGETEKPRGYQMSTR---LKIVTIHQ---EPFVYVKPT-LSDGTCKEEFTVNGDPV 223
Query: 508 PYAV---PYKLIPFGDGHNNPSC 527
+ P P H P C
Sbjct: 224 KKVICTGPNDTSPGSPRHTVPQC 246
Score = 52 (23.4 bits), Expect = 7.0e-17, Sum P(4) = 7.0e-17
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 309 PNGYIGL---NAYGFYAY--DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSL 363
P+G IGL N A+ D V ++A+A++ + K++ +G + +
Sbjct: 55 PDGIIGLQLINGKNESAHISDAVGVVAQAVHELLE--------KENITDPPRGCV--GNT 104
Query: 364 RIFNGGNLLRDSILQANMT-GTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSG 422
I+ G L + ++ + G G FN GD Y I+N+ ++G Y+G
Sbjct: 105 NIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI---YNG 161
Query: 423 LSVV 426
V+
Sbjct: 162 THVI 165
Score = 43 (20.2 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 890 EVKSRSKRRHVERTSYRSEDE-MSSCNSNRKHIELSSNLSLDSD-TRNCN 937
+V+ + RH+E+ +Y S E + + N+ H + + L+ + ++ C+
Sbjct: 488 QVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCD 537
>UNIPROTKB|F1RGG3 [details] [associations]
symbol:LOC100737141 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:FP015926 EMBL:FP102936 Ensembl:ENSSSCT00000003376 OMA:THIRICQ
Uniprot:F1RGG3
Length = 558
Score = 151 (58.2 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 483 FVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELV-RLITAGV 538
F ++ G+E GFC+D+ LL + +L+ +G N S T +V LI
Sbjct: 11 FQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQK 70
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAI 597
D AV I R K+ DF++P++ G+ ++ V ++FL PF+P +W +
Sbjct: 71 ADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLL 130
Query: 598 FFLAVGAVVWILEHRLND-EFRGP 620
+LAV V++ L RL+ E+ P
Sbjct: 131 AYLAVSCVLF-LAARLSPYEWYNP 153
Score = 139 (54.0 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ P++ D L +N G + + R+
Sbjct: 211 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 270
Query: 721 VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKN 772
+ P + K+ ++G +A V++ R YA L ST C + +G +
Sbjct: 271 MQSKQPSVFVKSTEEG-----IARVLNSR-YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 324
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P SP +I+ AIL+L EN L+ + KW C +
Sbjct: 325 GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE 369
Score = 40 (19.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 856 QFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN 915
++ + G T + +SR Q +++ K+ V +S + R +
Sbjct: 243 EYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLEST 302
Query: 916 SNRKHIELSSNLS 928
N H L+ NL+
Sbjct: 303 MNEYHRRLNCNLT 315
>FB|FBgn0004620 [details] [associations]
symbol:GluRIIA "Glutamate receptor IIA" species:7227
"Drosophila melanogaster" [GO:0005886 "plasma membrane"
evidence=ISS;IDA] [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=IDA;IMP]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:1900075
"positive regulation of neuromuscular synaptic transmission"
evidence=IMP] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IPI] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0046928 "regulation of neurotransmitter
secretion" evidence=IGI] [GO:0060025 "regulation of synaptic
activity" evidence=IMP;IDA] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0014069 EMBL:AE014134
GO:GO:0030054 GO:GO:0045211 GO:GO:0046928 GO:GO:0031594
InterPro:IPR001828 KO:K05313 GO:GO:0005234
GeneTree:ENSGT00700000104113 GO:GO:0015277 HSSP:P19491
GO:GO:0060025 PIR:A39280 FlyBase:FBgn0004620 EMBL:BT010006
RefSeq:NP_523484.2 UniGene:Dm.2601 SMR:Q9VMP4 STRING:Q9VMP4
EnsemblMetazoa:FBtr0079106 GeneID:33788 KEGG:dme:Dmel_CG6992
UCSC:CG6992-RI CTD:33788 InParanoid:Q9VMP4 OMA:DELENIW
GenomeRNAi:33788 NextBio:785261 Uniprot:Q9VMP4
Length = 907
Score = 140 (54.3 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 665 SSYTASLTSILTVQKLSSPIKGI-DSLRSSNYPIGYQVNSFARNYLVDELNIDESRLVPL 723
S+YTA+L + LT K S IK + D + G + + + D R
Sbjct: 643 STYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTSLFFSESNDTDYQRA--W 700
Query: 724 NSPEEYAKALKDGPHKGGVAAVVDDRA-YAELFLST--------RCEFSIVGQVFTKNGW 774
N +++ + +K GVA V ++ YA L +T C+ + +G+ + +
Sbjct: 701 NQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERNCDLTQIGEQIGEKHY 760
Query: 775 GFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRS--ACSSQGAKLDVDRLQL 828
G A P S ++S +IL+LSE G+LQ++ +KW C S ++D D L +
Sbjct: 761 GLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWWKNHNVTCDSYH-EVDGDELSI 815
Score = 115 (45.5 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 33/139 (23%), Positives = 66/139 (47%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGV-YDAAVG- 544
+G E G+ +D+ + L+ + + ++ G+G NP + +I + + A +G
Sbjct: 450 RGREKYEGYAVDLISKLSELMEFDYEFMIVN-GNGKYNPETKQWDGIIRKLIDHHAQIGV 508
Query: 545 -DIAIITNRTKMADFTQPYIESGLVVVAPVRKLD-SNAWAFLSPFTPMMWGVTAIFFLAV 602
D+ I R + DFT P+++ G+ ++ + N +AFL PF +W + IF +
Sbjct: 509 CDLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAVEVW-IYMIFAQLI 567
Query: 603 GAVVWILEHRLNDEFRGPP 621
+ ++ RL+ PP
Sbjct: 568 MTLAFVFIARLSYREWLPP 586
Score = 87 (35.7 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 46/192 (23%), Positives = 76/192 (39%)
Query: 1 MKLSGVMLLMIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVN 60
M+L V++ F+ I A + + +GA+ F N ++ +L+ A +VN
Sbjct: 1 MRLCPVVIYAFIIIIGFLEGIIALGGDDRNEITVGAI--FYENEKEI-ELSFDQAFREVN 57
Query: 61 SDP-TTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANEL 119
+ + L +K M N S FL L+ AI GP S +V+ +AN
Sbjct: 58 NMKFSELRFVTIKRYMPT-NDS-FLLQQITCELISNGVAAIFGPSSKAASDIVAQIANAT 115
Query: 120 QVPLLSFSAT-DPTLSS-LQFPYFVRTTQSDQYQMAAIAEIV-DHYGWREVIAIYVDDDH 176
+P + + + T L + S A EI+ +Y WR IY +
Sbjct: 116 GIPHIEYDLKLEATRQEQLNHQMSINVAPSLSVLSRAYFEIIKSNYEWRTFTLIYETPE- 174
Query: 177 GRNGIAALGDTL 188
G+A L D +
Sbjct: 175 ---GLARLQDLM 183
Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 591 MWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFA 639
+W V +L VG+ I++ + RGP R + ++WF F+ M +
Sbjct: 599 IWNVNNSTWLMVGS---IMQQGCDILPRGPHMRILTGMWWF-FALMMLS 643
Score = 39 (18.8 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 129 TDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYG--WRE 166
T L+ LQ ++ SD ++ +A+ D Y W+E
Sbjct: 172 TPEGLARLQDLMNIQALNSDYVKLRNLADYADDYRILWKE 211
>UNIPROTKB|F1P0L4 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001640
"adenylate cyclase inhibiting G-protein coupled glutamate receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:AADN02043882 EMBL:AADN02043883
IPI:IPI00577160 ProteinModelPortal:F1P0L4
Ensembl:ENSGALT00000003274 Uniprot:F1P0L4
Length = 891
Score = 162 (62.1 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 54/230 (23%), Positives = 101/230 (43%)
Query: 478 VSFREF-VSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRL 533
V FR+ ++ G++ G+CID+ +L + +L+ +G + +++
Sbjct: 419 VMFRKSDTALFGNDRFEGYCIDLLKELAVILGFTYEIRLVEDGKYGAQDDKGQWNGMIKE 478
Query: 534 ITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW 592
+ D AV + I R K DF++P++ G+ ++ + + ++FL+P +P +W
Sbjct: 479 LIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIW 538
Query: 593 GVTAIFFLAVGAVVWILE----HRLNDEFRGPPKRQVV----TIF---WFSFSTMFFAHK 641
+ +L V V++++ + D P +V T+F WF +
Sbjct: 539 MYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSDIVENNFTLFNSFWFGMGALMQQGS 598
Query: 642 EKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
E AL R SSYTA+L + LTV+++ SPI D L
Sbjct: 599 ELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 648
Score = 147 (56.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 51/237 (21%), Positives = 92/237 (38%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF + E AL R SSYTA+L + LTV+++ SPI
Sbjct: 586 FWFGMGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 645
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 646 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPTALVKNNEEGIQRTLTAD 705
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + VG + G+G P SP I+ AIL+L E L
Sbjct: 706 YALLMESTTIEYITQRNCNLTQVGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 765
Query: 803 RIHDKWLLRSACSSQGAKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSR 859
+ +KW + C K + L +++ F+ +++ +++ +
Sbjct: 766 VMKEKWWRGNGCPEDENK-EASALGIQNIGGIFIVLAAGLVLSVFVAMVEFIYKLRK 821
Score = 130 (50.8 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 66/277 (23%), Positives = 106/277 (38%)
Query: 41 STNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVA 99
+T V + A + + + +N + T L T L +Q + H F A +A + VA
Sbjct: 21 NTQVMSAEEQAFRFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVA 80
Query: 100 IIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIV 159
I GP ++ V + N L+VP + L + ++V AI ++V
Sbjct: 81 IFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLV 139
Query: 160 DHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVAL 219
+ WR +Y DD G + L +A R I K + D+ LL ++
Sbjct: 140 QYLKWRSATVVY-DDSTGLIRLQEL--IMAPSRYNIRLKIR-QLPLDTDDARPLLKEMKR 195
Query: 220 -TESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQ 278
E RII +H ++ A +GM+ Y +I T+ ALD S V ++
Sbjct: 196 GREFRIIFDCSHLMAAQIL-RQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLT 252
Query: 279 GVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGL 315
G L P I +W P +GL
Sbjct: 253 GFRILNVENPHV---SSIIEKWAMERLQSAPKAELGL 286
Score = 73 (30.8 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 68/284 (23%), Positives = 112/284 (39%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVAL-TESRIIV 226
A V DD G+ L + + A R I K + D+ LL ++ E RII
Sbjct: 147 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIR-QLPLDTDDARPLLKEMKRGREFRIIF 203
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+H ++ A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 204 DCSHLMAAQIL-RQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNVE 260
Query: 287 TPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLL--ARAINSFFKQGGNLS 344
P I +W P +GL G D L ++ +++ ++
Sbjct: 261 NPHV---SSIIEKWAMERLQSAPKAELGL-LDGVMMTDAALLYDAVHVVSVCYQRAPQMT 316
Query: 345 FSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEI 403
++ +Q H R + R GG + + I +A G G FN S G + +I
Sbjct: 317 ------VNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKSSGLRTDFDLDI 366
Query: 404 INVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPN--RSSSNQRL 445
I++ G ++G W+ +GL++ E + PN S SN+ L
Sbjct: 367 ISLKEDGLEKVGTWNPSNGLNIT--EISKGRGPNVTDSLSNRSL 408
>UNIPROTKB|F1MCM2 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting
G-protein coupled glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:DAAA02009187 IPI:IPI00709026
Ensembl:ENSBTAT00000012214 Uniprot:F1MCM2
Length = 881
Score = 169 (64.5 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 52/219 (23%), Positives = 99/219 (45%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+CID+ ++L ++ +L+ +G + +++ + D AV
Sbjct: 420 GNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVA 479
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K DF++P++ G+ ++ + + ++FL+P +P +W + +L V
Sbjct: 480 PLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVS 539
Query: 604 AVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ + D P +VV T+ FWF ++ E AL R
Sbjct: 540 CVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRI 599
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 600 IGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 638
Score = 146 (56.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 576 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 635
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 636 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTAD 695
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 696 YALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 755
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 756 IMKEKWWRGSGCPEEENK 773
Score = 121 (47.7 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 54/216 (25%), Positives = 87/216 (40%)
Query: 51 AIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTS 109
A + + + +N + T L T L +Q + H F A +A + VAI GP +
Sbjct: 21 AFRFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCT 80
Query: 110 HVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIA 169
+ V + N L+VP + L + ++V AI ++V + WR
Sbjct: 81 NAVQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATV 139
Query: 170 IYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVAL-TESRIIVVH 228
+Y DD G + L +A R I K + D+ LL ++ E RII
Sbjct: 140 VY-DDSTGLIRLQEL--IMAPSRYNIRLKIR-QLPLDSDDSRPLLKEMKRGREFRIIFDC 195
Query: 229 THYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
+H + A +GM+ Y +I T+ ALD
Sbjct: 196 SH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD 230
Score = 66 (28.3 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 66/278 (23%), Positives = 106/278 (38%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVAL-TESRIIV 226
A V DD G+ L + + A R I K + D+ LL ++ E RII
Sbjct: 137 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIR-QLPLDSDDSRPLLKEMKRGREFRIIF 193
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+H + A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 194 DCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNVD 250
Query: 287 TPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFS 346
P + +W P GL G D LL A++ ++ +
Sbjct: 251 NPHV---SAIVEKWSMERLQAAPRAESGL-LDGVMMTDAA-LLYDAVHIV-----SVCYQ 300
Query: 347 KDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YEI 403
+ +++ +Q H R + R GG + + I +A G G FN L +I
Sbjct: 301 RAPQMTVNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 356
Query: 404 INVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
I++ G ++G WS GL++ E + PN + S
Sbjct: 357 ISLKEDGLEKVGVWSPAEGLNIT--EVAKGRGPNVTDS 392
>UNIPROTKB|F1SV43 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015277 "kainate selective glutamate receptor activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting G-protein
coupled glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GeneTree:ENSGT00590000083056 OMA:EEQAFRF GO:GO:0001640
EMBL:FP104549 Ensembl:ENSSSCT00000004036 Uniprot:F1SV43
Length = 881
Score = 169 (64.5 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 52/219 (23%), Positives = 99/219 (45%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+CID+ ++L ++ +L+ +G + +++ + D AV
Sbjct: 420 GNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVA 479
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K DF++P++ G+ ++ + + ++FL+P +P +W + +L V
Sbjct: 480 PLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVS 539
Query: 604 AVVWILE----HRLNDEFRGPPKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ + D P +VV T+ FWF ++ E AL R
Sbjct: 540 CVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRI 599
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 600 IGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 638
Score = 146 (56.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 49/198 (24%), Positives = 80/198 (40%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF ++ E AL R SSYTA+L + LTV+++ SPI
Sbjct: 576 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 635
Query: 688 DSL-RSSNYPIGYQVNSFARNYLV-DELNIDESRLVPLNS-PEEYAKALKDGPHKGGVA- 743
D L + + G + + +++ E ++S P K ++G + A
Sbjct: 636 DDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTAD 695
Query: 744 -AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQ 802
A++ + E C + +G + G+G P SP I+ AIL+L E L
Sbjct: 696 YALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 755
Query: 803 RIHDKWLLRSACSSQGAK 820
+ +KW S C + K
Sbjct: 756 IMKEKWWRGSGCPEEENK 773
Score = 121 (47.7 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 54/216 (25%), Positives = 87/216 (40%)
Query: 51 AIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTS 109
A + + + +N + T L T L +Q + H F A +A + VAI GP +
Sbjct: 21 AFRFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCT 80
Query: 110 HVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIA 169
+ V + N L+VP + L + ++V AI ++V + WR
Sbjct: 81 NAVQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATV 139
Query: 170 IYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVAL-TESRIIVVH 228
+Y DD G + L +A R I K + D+ LL ++ E RII
Sbjct: 140 VY-DDSTGLIRLQEL--IMAPSRYNIRLKIR-QLPLDSDDSRPLLKEMKRGREFRIIFDC 195
Query: 229 THYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
+H + A +GM+ Y +I T+ ALD
Sbjct: 196 SH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD 230
Score = 66 (28.3 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 66/278 (23%), Positives = 106/278 (38%)
Query: 169 AIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVAL-TESRIIV 226
A V DD G+ L + + A R I K + D+ LL ++ E RII
Sbjct: 137 ATVVYDDS--TGLIRLQELIMAPSRYNIRLKIR-QLPLDSDDSRPLLKEMKRGREFRIIF 193
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+H + A +GM+ Y +I T+ ALD S V ++ G L
Sbjct: 194 DCSH-TMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV--NLTGFRILNVD 250
Query: 287 TPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFS 346
P + +W P GL G D LL A++ ++ +
Sbjct: 251 NPHV---SAIVEKWSMERLQAAPRAESGL-LDGVMMTDAA-LLYDAVHIV-----SVCYQ 300
Query: 347 KDSRLS--DIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPA-YEI 403
+ +++ +Q H R + R GG + + I +A G G FN L +I
Sbjct: 301 RAPQMTVNSLQCH-RHKAWRF--GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 356
Query: 404 INVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSS 441
I++ G ++G WS GL++ E + PN + S
Sbjct: 357 ISLKEDGLEKVGVWSPAEGLNIT--EVAKGRGPNVTDS 392
>UNIPROTKB|F6QCU7 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00711099 Ensembl:ENSBTAT00000026817
Uniprot:F6QCU7
Length = 797
Score = 196 (74.1 bits), Expect = 9.0e-16, Sum P(3) = 9.0e-16
Identities = 77/345 (22%), Positives = 143/345 (41%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+ +G ++ +V+ + D AV
Sbjct: 347 GNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVA 406
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 407 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 466
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 467 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 526
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFARNYL 709
SSYTA+L + LTV+++ SPI D L + + G + S +
Sbjct: 527 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFK 586
Query: 710 VDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEFSIV 765
+++ E ++S ++ A K +G H+ A++ + E C + +
Sbjct: 587 KSKISTYEKMWAFMSSRQQTALVKNSDEGIHRVLTTDYALLMESTSIEYVTQRNCNLTQI 646
Query: 766 GQVFTKNGWGFAFPRDSPLAVDISTAI-LKLSENGDLQRIHDKWL 809
G + G+G P I AI LK+ + L + W+
Sbjct: 647 GGLIDSKGYGVGTPIGKKEHSKIKIAIILKIQKEKSLHFNQEYWI 691
Score = 91 (37.1 bits), Expect = 9.0e-16, Sum P(3) = 9.0e-16
Identities = 39/198 (19%), Positives = 75/198 (37%)
Query: 69 TKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFS 127
T L +Q N F A A + A+ GP + + V + N L+VP +
Sbjct: 4 TTLTYDIQKINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTR 63
Query: 128 ATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDT 187
P++ + +++ A+ ++V +Y W+ V +Y D G+ L +
Sbjct: 64 WKHPSVDNRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVYEDS----TGLIRLQEL 118
Query: 188 LAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ A R I K +D LL ++ + ++ + + ++GM
Sbjct: 119 IKAPSRYNIKIKIRQLPSGNKDA-KPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGM 177
Query: 247 LGTGYVWIATSWLSTALD 264
+ Y + T+ ALD
Sbjct: 178 MTEYYHYFFTTLDLFALD 195
Score = 45 (20.9 bits), Expect = 9.0e-16, Sum P(3) = 9.0e-16
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 869 GGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSE-DEMSSCNSNR 918
G SSR + +F + + E +K++ K + RT +S + +C+ R
Sbjct: 739 GKSSRIEKCLSFNAIMEELGISLKNQKKLKKKSRTKGKSSFTSILTCHQRR 789
>ZFIN|ZDB-GENE-070822-3 [details] [associations]
symbol:grin2ca "glutamate receptor, ionotropic,
N-methyl D-aspartate 2Ca" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-070822-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX546473 EMBL:CU464067
IPI:IPI00932733 RefSeq:XP_002661175.2 Ensembl:ENSDART00000110554
Ensembl:ENSDART00000145215 GeneID:100329743 KEGG:dre:100329743
Uniprot:E7FH62
Length = 1400
Score = 152 (58.6 bits), Expect = 9.0e-16, Sum P(3) = 9.0e-16
Identities = 84/308 (27%), Positives = 135/308 (43%)
Query: 324 DTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLR-LDSLRIFNGGNLLRDSILQANMT 382
D V ++ + + SF KQ G F D GH+ L +R + G L R + N++
Sbjct: 302 DGVAIVVKGVESFRKQRG---FIPD-------GHMDCLSPIRPASNGTLYRHML---NVS 348
Query: 383 GTAGPARFNSHGDLINPAYEIINVI-GTGYRRIGYWSNY-SGLSVVR-PE-TLYSKPPNR 438
FNS G L+NP+ II + G + ++G NY SG+ +R P Y
Sbjct: 349 WENTDFSFNSDGYLVNPSMIIITLDRGRQWDKVG---NYESGILQMRYPVWPRYGTFLEP 405
Query: 439 SSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKG-SE-----MT 492
S N+ L + V P G L VP R + ++ G +E
Sbjct: 406 VSDNRHLTVATLEERPFVIVEA-VDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCC 464
Query: 493 SGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGV-----Y---DAAVG 544
GFCID+ + ++ L+ G H +LVR I G+ Y D A+G
Sbjct: 465 KGFCIDILKKLSRNIKFSYDLYLVTNGK-HG-----KLVRGIWNGMIGEVFYKRADMAIG 518
Query: 545 DIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGA 604
+ I R+++ DF+ P++E+G+ V+ + AFL P++P +W + + L V A
Sbjct: 519 SLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVA 578
Query: 605 V-VWILEH 611
V V++ E+
Sbjct: 579 VTVFVFEY 586
Score = 98 (39.6 bits), Expect = 9.0e-16, Sum P(3) = 9.0e-16
Identities = 42/180 (23%), Positives = 75/180 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVNSFARNYLVDELNIDE 717
+SYTA+L + + ++ + G+ + YP G N +
Sbjct: 651 ASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMH 710
Query: 718 SRLVPLNSP--EEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFTK 771
S +V N E+ +LK G + AAV++ A + C+ +G +VF
Sbjct: 711 SHMVKYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKD----EGCKLVTIGSGKVFAT 766
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDRL 826
G+G A ++S I A+L+ +GD Q++ WL C ++ +KLD+D +
Sbjct: 767 TGYGIALQKESRWKRPIDLALLQFLADGDTQKLQTVWLT-GICRNEKKEVMSSKLDIDNM 825
Score = 93 (37.8 bits), Expect = 9.0e-16, Sum P(3) = 9.0e-16
Identities = 43/207 (20%), Positives = 97/207 (46%)
Query: 101 IGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPY------FVRTTQSDQYQMAA 154
IG +AV + ++ ++ + VP++ S S++ P+ F++ S + Q+
Sbjct: 108 IG-SEAV-AQILDFISTQTAVPIVGISGG----SAVVLPHKGDGSTFLQLGSSIEQQING 161
Query: 155 IAEIVDHYGWRE---VIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEIT 211
+ ++++ Y W V ++Y D + I + DT + L+ + + D +
Sbjct: 162 MFKVMEEYNWDSFVVVTSLYPGYDTYVDYIRSFIDT---SYFLWELQDTLTFDMSADGMN 218
Query: 212 DLLVKVALTE--SRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSP- 268
DL + L + +++++V+ ++ +F +A+ +G++G GY+W S L+ +P
Sbjct: 219 DLRARRLLQQIDAQVLLVYCSHDEAQYLFSMAREVGLVGPGYIWFIPS-LAVGNPNIAPP 277
Query: 269 --FPSDVMDDI--QGVLTLRTYTPDSV 291
FP ++ I + ++LR D V
Sbjct: 278 DSFPVGLISIITDRWKMSLRNRVRDGV 304
Score = 45 (20.9 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 168 IAIYVDDDHGRNGIAALGDTLAAKRCR-ISFKAPLSVEATEDEITDLL 214
I + V++ + R + + DTLAA R + F+ + EA +I D +
Sbjct: 74 ITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVA-QILDFI 120
>ZFIN|ZDB-GENE-060809-5 [details] [associations]
symbol:si:ch211-251b21.1 "si:ch211-251b21.1"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 ZFIN:ZDB-GENE-060809-5 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG241927
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HOVERGEN:HBG104989 OrthoDB:EOG43FGX0 EMBL:CU499311 IPI:IPI00482094
RefSeq:NP_001138274.1 UniGene:Dr.3211 Ensembl:ENSDART00000008778
Ensembl:ENSDART00000139096 GeneID:571720 KEGG:dre:571720
OMA:QEGNFAF NextBio:20890667 Uniprot:B8JLR6
Length = 458
Score = 229 (85.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 86/353 (24%), Positives = 152/353 (43%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAV 543
KGSE+ GFCID+ +A N L + L+ +G ++ + ++ + G D AV
Sbjct: 39 KGSEL-EGFCIDMLSAISNKLGFKYDVHLVKDGRYGKTDDSGNWNGMIGEVVRGEADIAV 97
Query: 544 GDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSP---FTPMMWGVTAIFF 599
+ + R + D ++P++++GL + +RK L S+ FLS F+ MW + +
Sbjct: 98 APLTLTAQREAVVDMSKPFMQTGLSFI--MRKDLGSDDSQFLSLLKLFSTEMWMGVLVAY 155
Query: 600 LAVGAVVWILEHRLNDEFRGPPK-RQVVTI---FWFSFSTMFFAHKEKTVSAL-GRXXXX 654
L ++++ E+ P K T+ FW++ + AL GR
Sbjct: 156 LLTSICIFLVSRISPCEWEQPEKDNNSFTLSHSFWYTVGALTLQGAGPHPKALSGRVITS 215
Query: 655 XXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNY-PIGYQVNSFARNYLVDEL 713
+ Y A+L+ L IK + L + N G +S + N+ +
Sbjct: 216 IWWIFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVIEYGTIKDSSSFNFFKNSN 275
Query: 714 NIDESRLVP-LNSPEEYAKALKDGPHKG--GVAAVVDDRAYAELFLSTRCEFSIVGQVFT 770
N R+ + + Y+ +G + G A + + +L ++ C + ++
Sbjct: 276 NPTYHRIYEHIKEAQSYSLNAAEGFRRAQKGNYAFIGESVSLDLAVARYCNLTRAPEIIG 335
Query: 771 KNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRS--ACSSQGAKL 821
G+ A P SPL ++S AIL+LSE+G+L KW S A S+GA L
Sbjct: 336 MRGYSIAAPLGSPLIKNLSVAILRLSESGELDYFRSKWWASSCVAKDSKGAPL 388
>UNIPROTKB|F8W7L6 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4572
EMBL:AC079233 EMBL:AC112240 IPI:IPI01012058
ProteinModelPortal:F8W7L6 SMR:F8W7L6 Ensembl:ENST00000323661
ArrayExpress:F8W7L6 Bgee:F8W7L6 Uniprot:F8W7L6
Length = 730
Score = 152 (58.6 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 73/336 (21%), Positives = 139/336 (41%)
Query: 99 AIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEI 158
AI G D + + ++ L V ++ S PT + P+ ++ + D A+ +
Sbjct: 40 AIFGFYDKKSVNTITSFCGTLHVSFITPSF--PTDGT--HPFVIQM-RPDL--KGALLSL 92
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITDLLVK 216
+++Y W + +Y D D G + + A+ D+ A K+ +++ ++ + ++ L
Sbjct: 93 IEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYRSLFQD 151
Query: 217 VALTESRIIVVHTHYNR-GPVVFHVAQYLGMLGTGYVWIATSWLSTALDT-NSPFPSDVM 274
+ L + R +++ ++ +V V +G GY +I + T D F +
Sbjct: 152 LELKKERRVILDCERDKVNDIVDQVIT-IGKHVKGYHYIIANLGFTDGDLLKIQFGGANV 210
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAY-GFYAYDTVWLLARAI 333
Q V Y D L KFI RW L + + P + Y YD V ++ A
Sbjct: 211 SGFQIV----DY--DDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF 264
Query: 334 NSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSH 393
+ KQ + S+ D + + + G + ++ Q + G +G +F+ +
Sbjct: 265 RNLRKQ--RIEISRRGNAGDCLANPAVP----WGQGVEIERALKQVQVEGLSGNIKFDQN 318
Query: 394 GDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
G IN I+ + G R+IGYWS + V E
Sbjct: 319 GKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTE 354
Score = 131 (51.2 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 58/282 (20%), Positives = 112/282 (39%)
Query: 530 LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFT 588
+V + G D A+ + I R ++ DF++P++ G+ +++ +K ++FL P
Sbjct: 437 MVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLA 496
Query: 589 PMMWGVTAIFFLAVGAVVWILEHRL-----NDEFRGPPKRQ---------VVTIFWFSFS 634
+W ++ V V++++ +EF + Q + WFS
Sbjct: 497 YEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLG 556
Query: 635 TMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSS 693
+ + +L GR SSYTA+L + LTV+++ SPI+ + L S
Sbjct: 557 AFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL-SK 615
Query: 694 NYPIGYQV---NSFARNYLVDELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVA 743
I Y S + ++ + + + S P + + +G KG A
Sbjct: 616 QTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYA 675
Query: 744 AVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLA 785
+++ + C+ VG G+G A P+ S L+
Sbjct: 676 YLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLS 717
Score = 109 (43.4 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 486 VKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVY 539
++G+E G+C+D+ AA YKL GDG + +V + G
Sbjct: 389 LEGNERYEGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKA 446
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIF 598
D A+ + I R ++ DF++P++ G+ +++ +K ++FL P +W
Sbjct: 447 DIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFA 506
Query: 599 FLAVGAVVWIL 609
++ V V++++
Sbjct: 507 YIGVSVVLFLV 517
Score = 46 (21.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFKAPLSVE 204
Y + AEI H G++ + I D +G R+ + + + + + I+ APL++
Sbjct: 398 YCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAI-APLTIT 456
Query: 205 ATEDEITD 212
+E+ D
Sbjct: 457 LVREEVID 464
>TIGR_CMR|SPO_3335 [details] [associations]
symbol:SPO_3335 "glutamine ABC transporter, periplasmic
glutamine-binding protein" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0006868 "glutamine transport" evidence=ISS] [GO:0015186
"L-glutamine transmembrane transporter activity" evidence=ISS]
[GO:0016597 "amino acid binding" evidence=ISS] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00062 GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0035235 GO:GO:0030288 GO:GO:0005234 GO:GO:0004970 KO:K02030
RefSeq:YP_168531.1 ProteinModelPortal:Q5LN77 GeneID:3194025
KEGG:sil:SPO3335 PATRIC:23380121 HOGENOM:HOG000123673 OMA:LIWLAER
ProtClustDB:CLSK751639 Uniprot:Q5LN77
Length = 361
Score = 220 (82.5 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 85/348 (24%), Positives = 147/348 (42%)
Query: 470 LRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE 529
L++ R F FV G E +GF +D+ A + L + Y L ++
Sbjct: 34 LQVTTVTRPPF-SFVE-DGVE--TGFSMDLLAALADKL--GLGYTL------ERKEKFSD 81
Query: 530 LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAW--AFLSPF 587
++ + G D A+ +I+I R DF+QP ESGL ++ P ++ A LS
Sbjct: 82 MLAAVMDGEADMAIANISITAARETEMDFSQPIFESGLQILVPAETNAGSSLLRALLSRD 141
Query: 588 TPMMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTV-- 645
+ G + L G ++W E R F FW++ + + E+ V
Sbjct: 142 LFLAIGAAFVILLTGGMLMWYFERRAQPYFDRKLHEAWFPSFWWALNLVVNGGFEERVPR 201
Query: 646 SALGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFA 705
+A GR S +TA +TS++TV+ +S + ++ L +G S A
Sbjct: 202 TAFGRLFGVLLVISSLFVVSVFTARITSVMTVEAISGSVNSVNDLYGQE--VGTIDGSTA 259
Query: 706 RNYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIV 765
+L +ID + L +E A + +G + A+V D + S + + V
Sbjct: 260 AGFLTRR-DIDFAAFSDL---QEMITAFE----RGALDAIVFDAPILSYYASHQGKGKAV 311
Query: 766 --GQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLR 811
G +F + +G AFP S +++ A+L L E+G + ++ KW R
Sbjct: 312 TTGAIFLRENYGIAFPTGSARVEEVNQALLALREDGTYEELYRKWFGR 359
>WB|WBGene00001615 [details] [associations]
symbol:glr-4 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371 HSSP:P19491
EMBL:FO080131 GeneID:174258 KEGG:cel:CELE_C06A8.9 CTD:174258
PIR:T15429 RefSeq:NP_001254126.1 ProteinModelPortal:Q17697
SMR:Q17697 EnsemblMetazoa:C06A8.9a UCSC:C06A8.9 WormBase:C06A8.9a
InParanoid:Q17697 OMA:IESRHEA NextBio:883261 ArrayExpress:Q17697
Uniprot:Q17697
Length = 951
Score = 157 (60.3 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 625 VVTIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSP 683
V+ FWF+ ++ + A R SSYTA L + LTV+++S+P
Sbjct: 583 VLNSFWFTMGSLMQQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVERMSTP 642
Query: 684 IKGIDSLRSSNYPIGYQV---NSFARNYLVDELNIDESR--LVPLNSPEEYAKALKDGPH 738
I+ L ++ I Y V S + ++ + E ++ +SP + + ++G
Sbjct: 643 IESTQDL-ANQQKIRYGVLKSGSTMDFFRESKIPMYERMWSVMESSSPGVFVNSSREGIA 701
Query: 739 K---GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKL 795
+ GG A +++ + E +L CE +G + G+G A P+ SPL +S +L+L
Sbjct: 702 RVKSGGYAYMMES-SMLEYYLERDCELQSIGGLLDSKGYGIALPKGSPLRDILSRTVLQL 760
Query: 796 SENGDLQRIHDKW 808
E L+ + +KW
Sbjct: 761 QERTILEALKNKW 773
Score = 104 (41.7 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 37/151 (24%), Positives = 64/151 (42%)
Query: 467 GRHLRIGVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDG----- 521
G HLR+ V FV G GFCID+ +L + Y +I DG
Sbjct: 407 GLHLRVVVYLE---EPFVIKTGENQYEGFCIDLLNEMTQVLKFN--YTIIEVQDGTYGIE 461
Query: 522 HNNPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGL-VVVAPV-RKLDSN 579
+ ++ + D ++ + I +R ++ DFT P++ G+ +++A + D
Sbjct: 462 DESGRWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKG 521
Query: 580 A-WAFLSPFTPMMWGVTAIFFLAVGAVVWIL 609
+ W FL P + +W I + V + IL
Sbjct: 522 SLWTFLEPLSLTVWISLLISYCIVSYSMHIL 552
Score = 68 (29.0 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 355 QGHLRLDSLRIFNGGNLLRDSILQANMTGT-AGPARFNSHGDLINPAYEIINVIGTGYRR 413
Q + DS I++ G ++ + I + + G +F S+G+ + Y + I + + +
Sbjct: 315 QSSIMCDSHDIWSDGRIMNEGIRKLKLRNQLTGDVQFKSNGERDDIMYHGVGRINSQFVK 374
Query: 414 IGYWSNYSG 422
+G WS G
Sbjct: 375 LGNWSEKRG 383
>UNIPROTKB|F1P0E1 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00681402 Ensembl:ENSGALT00000027749 Uniprot:F1P0E1
Length = 819
Score = 152 (58.6 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 62/258 (24%), Positives = 105/258 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 474 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 532
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 533 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 592
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 593 STKEFFRRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 652
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ SPL ++ A+LKLSE G L ++ +KW + C
Sbjct: 653 QRKPCDTMKVGGNLDSKGYGVATPKGSPLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGEC 712
Query: 815 SSQ--GAKLDVDRLQLKS 830
+ G+K L L +
Sbjct: 713 GPKDSGSKDKTSALSLSN 730
Score = 144 (55.7 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 52/225 (23%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSC---TELVRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G G +P +V + G + A
Sbjct: 355 EGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGMVGELVYGKAEIA 414
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 415 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 474
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 475 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 533
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 534 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 578
Score = 127 (49.8 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 52/277 (18%), Positives = 106/277 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + ++S + VE D
Sbjct: 58 ALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS---AICVENFNDASYRR 113
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL + + + V+ R + +G GY +I + +
Sbjct: 114 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 173
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 174 A--NVTGFQLVDFSTP---MVTKLMQRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 228
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+ +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 229 FRNLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 282
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
+G +N ++ + TG R++GYW++ L +++ E
Sbjct: 283 YGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHE 319
Score = 47 (21.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + +EI H G + IAI D +G NG+ +G+ + K I+ APL
Sbjct: 363 YCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM--VGELVYGK-AEIAV-APL 418
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 419 TITLVREEVID 429
>UNIPROTKB|E1BKL6 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IEA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0035249 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:NINSVME GO:GO:0031630 EMBL:DAAA02047229
EMBL:DAAA02047230 EMBL:DAAA02047231 IPI:IPI00838934
Ensembl:ENSBTAT00000015567 Uniprot:E1BKL6
Length = 972
Score = 174 (66.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 81/328 (24%), Positives = 134/328 (40%)
Query: 518 FGDGHNNPSCTELV-RLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK- 575
+G N S T +V LI D AV I R K+ DF++P++ G+ ++ V
Sbjct: 472 YGAPEPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMG 531
Query: 576 LDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLND-EFRGP-P----KRQVV--- 626
++FL PF+P +W + +LAV V++ L RL+ E+ P P + ++
Sbjct: 532 RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF-LAARLSPYEWYNPHPCLRARPHILENQ 590
Query: 627 -TI---FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLS 681
T+ WF E AL R SSYTA+L + LTVQ++
Sbjct: 591 YTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRME 650
Query: 682 SPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL---VPLNSPEEYAKALKDGP 737
P++ D L +N G + + R+ + P + K+ ++G
Sbjct: 651 VPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEG- 709
Query: 738 HKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKNGWGFAFPRDSPLAVDIS 789
+A V++ R YA L ST C + +G + G+G P SP +
Sbjct: 710 ----IARVLNSR-YAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPPRPITT 764
Query: 790 TAILKLSENGDLQRIHDKWLLRSACSSQ 817
A++ + N L+ + KW C +
Sbjct: 765 LALVSGTWNHHLEILKRKWWEGGRCPKE 792
Score = 151 (58.2 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 483 FVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELV-RLITAGV 538
F ++ G+E GFC+D+ LL + +L+ +G N S T +V LI
Sbjct: 434 FQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQK 493
Query: 539 YDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRK-LDSNAWAFLSPFTPMMWGVTAI 597
D AV I R K+ DF++P++ G+ ++ V ++FL PF+P +W +
Sbjct: 494 ADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLL 553
Query: 598 FFLAVGAVVWILEHRLND-EFRGP 620
+LAV V++ L RL+ E+ P
Sbjct: 554 AYLAVSCVLF-LAARLSPYEWYNP 576
Score = 105 (42.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 66/331 (19%), Positives = 133/331 (40%)
Query: 15 ELFVYRITAQASGRPSVVN---IGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL 71
EL + I A AS V++ + A+L T G+ +LA+ A + +N ++
Sbjct: 4 ELLLLLIVAFASPSRQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARV 63
Query: 72 KLQMQDCNHSGFLALAEAL-HLMEGQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSAT 129
++ + + + + ++ V+++GP + S VSH+ E ++P +
Sbjct: 64 EVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPE 123
Query: 130 D-PTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTL 188
+ P L L+F V S++ A++ I+ + + I + + L + +
Sbjct: 124 ETPRLQYLRFAS-VSLYPSNEDVSLAVSRILKSFNYPSASLICAKAEC----LLRLEELV 178
Query: 189 AAKRCRISFKAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ IS K LSV +D + T LL ++ + I++ + + ++ A LGM
Sbjct: 179 --RGFLIS-KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGM 235
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRN 302
Y +I T+ L + V++D +L + +F+ WR
Sbjct: 236 TSAFYKYILTTMDFPILHLDG-----VVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRE 290
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAI 333
+A T Y G +D V ++ A+
Sbjct: 291 NCEAST---YPGPALSAALMFDAVHVVVSAV 318
Score = 97 (39.2 bits), Expect = 9.9e-11, Sum P(3) = 9.9e-11
Identities = 55/254 (21%), Positives = 96/254 (37%)
Query: 198 KAPLSVEATED--EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
K LSV +D + T LL ++ + I++ + + ++ A LGM Y +I
Sbjct: 185 KETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYIL 244
Query: 256 TSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNG 311
T+ L + V++D +L + +F+ WR +A T
Sbjct: 245 TTMDFPILHLDG-----VVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEAST--- 296
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNL 371
Y G +D V ++ A+ L+ S++ + L S I+ G
Sbjct: 297 YPGPALSAALMFDAVHVVVSAVRE-------LNRSQEIGVKP----LACTSANIWPHGTS 345
Query: 372 LRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETL 431
L + + G G FNS G N I+ G+R IG W YS ++ T
Sbjct: 346 LMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVW--YSNRTLAMNATT 403
Query: 432 YSKPPNRSSSNQRL 445
+++ +N+ L
Sbjct: 404 LDINLSQTLANKTL 417
Score = 40 (19.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 14/73 (19%), Positives = 28/73 (38%)
Query: 856 QFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN 915
++ + G T + +SR Q +++ K+ V +S + R +
Sbjct: 666 EYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLEST 725
Query: 916 SNRKHIELSSNLS 928
N H L+ NL+
Sbjct: 726 MNEYHRRLNCNLT 738
>MGI|MGI:1927505 [details] [associations]
symbol:Tas1r1 "taste receptor, type 1, member 1"
species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0008527 "taste receptor activity" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0050912
"detection of chemical stimulus involved in sensory perception of
taste" evidence=ISO] [GO:0050917 "sensory perception of umami
taste" evidence=ISO] InterPro:IPR000337 InterPro:IPR011500
InterPro:IPR017978 InterPro:IPR017979 Pfam:PF00003 Pfam:PF07562
PRINTS:PR00248 PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981
PROSITE:PS50259 Pfam:PF01094 MGI:MGI:1927505 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 InterPro:IPR001828 GO:GO:0050909
CTD:80835 eggNOG:NOG248202 HOVERGEN:HBG108601 KO:K04624
OrthoDB:EOG4NKBTW EMBL:AY032622 EMBL:AF301161 EMBL:AF301162
EMBL:AF337040 IPI:IPI00462902 RefSeq:NP_114073.1 UniGene:Mm.29232
ProteinModelPortal:Q99PG6 SMR:Q99PG6 STRING:Q99PG6
PhosphoSite:Q99PG6 PRIDE:Q99PG6 GeneID:110326 KEGG:mmu:110326
HOGENOM:HOG000038047 InParanoid:Q99PG6 NextBio:363783
CleanEx:MM_TAS1R1 Genevestigator:Q99PG6
GermOnline:ENSMUSG00000028950 Uniprot:Q99PG6
Length = 842
Score = 224 (83.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 70/232 (30%), Positives = 118/232 (50%)
Query: 58 DVNSDPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVA- 116
DV S+ + + T L Q H L + L + VA+IGP + T H V+ A
Sbjct: 105 DVCSESSNVYATLRVLAQQGTGH---LEMQRDLRNHSSKVVALIGPDN--TDHAVTTAAL 159
Query: 117 -NELQVPLLSFSATDPTLSSLQ-FPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDD 174
+ +PL+S+ A+ LS + FP F+RT SD+YQ+ I ++ +GW + +
Sbjct: 160 LSPFLMPLVSYEASSVILSGKRKFPSFLRTIPSDKYQVEVIVRLLQSFGWVWISLVGSYG 219
Query: 175 DHGRNGIAALGDTLAAKRCRISFK--APLSVEATEDEITDLLVKVALTESRIIVVHTHYN 232
D+G+ G+ AL + + ++FK PLS +A + + +++++A + ++VV ++ +
Sbjct: 220 DYGQLGVQALEELATPRGICVAFKNVVPLSAQAGDPRMQRMMLRLARARTTVVVVFSNRH 279
Query: 233 RGPVVFHVAQYLGMLGTGYVWIATS-WLSTALDTNSPFPSDVMDDIQGVLTL 283
V F + L L TG VWIA+ W A+ TN P S IQG+ T+
Sbjct: 280 LDGVFFR-SVVLANL-TGKVWIASEDW---AISTNIPNVSG----IQGIGTV 322
>UNIPROTKB|F1N982 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00821478 ProteinModelPortal:F1N982
Ensembl:ENSGALT00000036434 Uniprot:F1N982
Length = 819
Score = 150 (57.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 59/244 (24%), Positives = 100/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 474 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 532
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 533 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 592
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 593 STKEFFRRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 652
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ SPL ++ A+LKL+E G L ++ +KW + C
Sbjct: 653 QRKPCDTMKVGGNLDSKGYGVATPKGSPLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 712
Query: 815 SSQG 818
S G
Sbjct: 713 GSGG 716
Score = 144 (55.7 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 52/225 (23%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSC---TELVRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G G +P +V + G + A
Sbjct: 355 EGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGMVGELVYGKAEIA 414
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 415 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 474
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 475 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 533
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 534 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 578
Score = 127 (49.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 52/277 (18%), Positives = 106/277 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + ++S + VE D
Sbjct: 58 ALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS---AICVENFNDASYRR 113
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL + + + V+ R + +G GY +I + +
Sbjct: 114 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 173
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 174 A--NVTGFQLVDFSTP---MVTKLMQRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 228
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+ +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 229 FRNLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 282
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
+G +N ++ + TG R++GYW++ L +++ E
Sbjct: 283 YGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHE 319
Score = 47 (21.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + +EI H G + IAI D +G NG+ +G+ + K I+ APL
Sbjct: 363 YCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM--VGELVYGK-AEIAV-APL 418
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 419 TITLVREEVID 429
>ZFIN|ZDB-GENE-081104-209 [details] [associations]
symbol:si:ch211-264f5.8 "si:ch211-264f5.8"
species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-081104-209 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:CU207217 EMBL:CABZ01071364 EMBL:CABZ01071365
EMBL:CABZ01071366 IPI:IPI00961248 Ensembl:ENSDART00000114472
Uniprot:F1R276
Length = 979
Score = 187 (70.9 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 77/308 (25%), Positives = 137/308 (44%)
Query: 474 VPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTEL 530
V + ++++F +GS+ GFC+D+ ++L ++ KL+ +G N S T +
Sbjct: 402 VMRKENYQDF---QGSDQYEGFCVDMLRELADILKFSFRIKLVDDGLYGAPEPNGSWTGM 458
Query: 531 VRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVR-KLDSNAWAFLSPFTP 589
V + D AV I + R K+ DF++P++ G+ ++ V ++FL PF+P
Sbjct: 459 VGELINRKADLAVAGFTITSEREKVIDFSKPFMNLGISILYRVHIGRKPGYFSFLDPFSP 518
Query: 590 MMWGVTAIFFLAVGAVVWILEHRLND-EFRGP-P----KRQVV----TI---FWFSFSTM 636
+W + +LAV V++ L RL+ E+ P P +R ++ T+ WF
Sbjct: 519 AVWLFMLLAYLAVSCVLF-LAARLSPYEWYNPFPCWRERRDLLENQYTLGNSLWFPIGGF 577
Query: 637 FFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRS-SN 694
E AL R SSYTA+L + LTVQ++ PI+ + L +N
Sbjct: 578 MQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESAEDLADQTN 637
Query: 695 YPIGYQVNSFARNYLVDELNIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAEL 754
G + ++ R+ ++ + +K G+A V++ + YA L
Sbjct: 638 IQYGTIQGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKSTEE--GIARVLNSK-YAFL 694
Query: 755 FLSTRCEF 762
ST E+
Sbjct: 695 LESTMNEY 702
Score = 129 (50.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 42/162 (25%), Positives = 72/162 (44%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNIDESRL--- 720
SSYTA+L + LTVQ++ PI+ + L +N G + ++ R+
Sbjct: 607 SSYTANLAAFLTVQRMEVPIESAEDLADQTNIQYGTIQGGSTMTFFMNSRYQTYQRMWNY 666
Query: 721 VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLST--------RCEFSIVGQVFTKN 772
+ P + K+ ++G +A V++ + YA L ST C + +G +
Sbjct: 667 MYSKQPSVFVKSTEEG-----IARVLNSK-YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 720
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSAC 814
G+G P SP +I+ IL+L EN L+ + +W C
Sbjct: 721 GYGIGMPLGSPFRDEITLGILQLQENNRLEILKRRWWEGGKC 762
Score = 90 (36.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 46/227 (20%), Positives = 98/227 (43%)
Query: 36 ALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAEAL-HLME 94
A+L + G+ +LA+ A +++NS ++++ + + + + ++
Sbjct: 2 AILDDQSACGRGERLALALARENINSLMEGPARARVEVDIFELQRDSQYETTDTMCQILP 61
Query: 95 GQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSATD-PTLSSLQFPYFVRTTQSDQYQM 152
V++IGP + S VSH+ E ++P + + P L L+F V S++
Sbjct: 62 KGVVSVIGPASSPASGSTVSHICGEKEIPHIKIGPEETPRLPYLRFAS-VTLYPSNEDLS 120
Query: 153 AAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEI-- 210
AI I+ +G+ I + + L + + + IS + LSV ++ +
Sbjct: 121 LAIGAILRSFGYPTASLICAKAEC----LLRLEELV--RHFLIS-RETLSVRMLDENLDP 173
Query: 211 TDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATS 257
T LL ++ + I++ + + ++ A LGM Y +I T+
Sbjct: 174 TPLLKEIRDDKVATIIIDANASVSILILKKASELGMTSAFYKYILTT 220
Score = 77 (32.2 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 54/247 (21%), Positives = 92/247 (37%)
Query: 201 LSVEATEDEI--TDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSW 258
LSV ++ + T LL ++ + I++ + + ++ A LGM Y +I T+
Sbjct: 162 LSVRMLDENLDPTPLLKEIRDDKVATIIIDANASVSILILKKASELGMTSAFYKYILTTM 221
Query: 259 LSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNGYIG 314
L + DV++D ++ +FI WR D +P Y G
Sbjct: 222 DFPLLRLD-----DVVNDQSNIVGFSMLNNSHPFYLEFIRSLNLSWREGCDL-SP--YPG 273
Query: 315 LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRD 374
+D V ++ A+ L+ S++ + L S I+ G L +
Sbjct: 274 PALSSALMFDAVHVVVGAVRE-------LNRSQEIGVKP----LSCTSSLIWQHGTSLMN 322
Query: 375 SILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYW-------SNYSGLSVVR 427
+ G G FNS G N I+ G++ IG W N + L +
Sbjct: 323 YLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKFKGGHKEIGVWYSNNTLAMNSTSLDINT 382
Query: 428 PETLYSK 434
ETL +K
Sbjct: 383 SETLANK 389
>UNIPROTKB|F1P0E2 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AADN02005016 EMBL:AADN02005017
EMBL:AADN02005018 IPI:IPI00581692 ProteinModelPortal:F1P0E2
Ensembl:ENSGALT00000027747 Uniprot:F1P0E2
Length = 902
Score = 150 (57.9 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 59/244 (24%), Positives = 100/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ SPL ++ A+LKL+E G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSPLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 795
Query: 815 SSQG 818
S G
Sbjct: 796 GSGG 799
Score = 144 (55.7 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 52/225 (23%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSC---TELVRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G G +P +V + G + A
Sbjct: 438 EGNDKFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 127 (49.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 52/277 (18%), Positives = 106/277 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + ++S + VE D
Sbjct: 141 ALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS---AICVENFNDASYRR 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL + + + V+ R + +G GY +I + +
Sbjct: 197 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFSTP---MVTKLMQRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+ +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRNLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
+G +N ++ + TG R++GYW++ L +++ E
Sbjct: 366 YGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHE 402
Score = 47 (21.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGR--------NGIAALGDTLAAKRCRISFKAPL 201
Y + +EI H G + IAI D +G NG+ +G+ + K I+ APL
Sbjct: 446 YCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETKIWNGM--VGELVYGK-AEIAV-APL 501
Query: 202 SVEATEDEITD 212
++ +E+ D
Sbjct: 502 TITLVREEVID 512
>UNIPROTKB|J9NV46 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03016479
Ensembl:ENSCAFT00000048687 Uniprot:J9NV46
Length = 849
Score = 184 (69.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVG 544
G++ G+C+D+ N+L + KL+P +G ++ +V+ + D AV
Sbjct: 400 GNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVA 459
Query: 545 DIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVG 603
+ I R K+ DF++P++ G+ ++ + ++FL+P +P +W + L V
Sbjct: 460 PLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVS 519
Query: 604 AVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTMFFAHKEKTVSALG-RX 651
V++++ E+ P P VV T+ FWF + E AL R
Sbjct: 520 CVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRI 579
Query: 652 XXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
SSYTA+L + LTV+++ SPI D L
Sbjct: 580 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 618
Score = 157 (60.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 68/315 (21%), Positives = 127/315 (40%)
Query: 593 GVTAIFFLAVGAVV--WILEHRLNDEFRGPPKR-QVVTIFWFSFSTMFFAHKEKTVSALG 649
GV+ + F+ W H N + ++ FWF + E AL
Sbjct: 517 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 576
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-YQVNSFAR 706
R SSYTA+L + LTV+++ SPI D L + + G + S
Sbjct: 577 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMT 636
Query: 707 NYLVDELNIDESRLVPLNSPEEYA--KALKDGPHKGGVA--AVVDDRAYAELFLSTRCEF 762
+ +++ E ++S ++ A K +G + A++ + E C
Sbjct: 637 FFKKSKISTYEKMWAFMSSRQQTALVKNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNL 696
Query: 763 SIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQGAKLD 822
+ +G + G+G P SP I+ AIL+L E G L + +KW + C + +K +
Sbjct: 697 TQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDSK-E 755
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQTF-L 881
L +++ F+ + + +++ ++ D E S +A ++ +
Sbjct: 756 ASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKN--NDVEQC--LSFNAIMEELGI 811
Query: 882 SFVNEKEDEVKSRSK 896
S N+K+ + KSR+K
Sbjct: 812 SLKNQKKLKKKSRTK 826
Score = 90 (36.7 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 71/373 (19%), Positives = 142/373 (38%)
Query: 69 TKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFS 127
T L +Q N F A A + A+ GP + + V + N L+VP +
Sbjct: 4 TTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTR 63
Query: 128 ATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDT 187
P++ + +++ A+ ++V +Y W+ V +Y D G+ L +
Sbjct: 64 WKHPSVDNKDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTLVYEDS----TGLIRLQEL 118
Query: 188 LAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGM 246
+ A R I K +D LL ++ + ++ + + ++GM
Sbjct: 119 IKAPSRYNIKIKIRQLPSGNKDA-KPLLKEMKKGKEFYVIFDCSHGTAAEILKQILFMGM 177
Query: 247 LGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTP--DSVLKRKFISRWRNLT 304
+ Y + T+ ALD S V ++ G L P S++++ + R +
Sbjct: 178 MTEYYHYFFTTLDLFALDLELYRYSGV--NMTGFRLLNIDNPHVSSIIEKWSMERLQ--A 233
Query: 305 DAKTPNGYIG--LNAYGFYAYDTVWLLARAIN-------SFFKQGGNLSFSKDSRLSDIQ 355
+ G + + YD V+++A A + S + + + R ++
Sbjct: 234 PPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLI 293
Query: 356 GHLRLDSL--RI-FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYR 412
R D L RI FN + LR ++ + G++ Y++ ++
Sbjct: 294 KEARWDGLTGRITFNKTDGLRKDF-DLDIISLKEEGTEKAAGEVSKHLYKV-------WK 345
Query: 413 RIGYWSNYSGLSV 425
+IG W++ SGL++
Sbjct: 346 KIGIWNSNSGLNM 358
>UNIPROTKB|G3V186 [details] [associations]
symbol:GRID1 "Glutamate receptor, ionotropic, delta 1,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0035235 EMBL:CH471142 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 UniGene:Hs.530653 HGNC:HGNC:4575 EMBL:AL844892
EMBL:AC022028 EMBL:AC073162 EMBL:AC079955 EMBL:AL451059
EMBL:AL596135 EMBL:AL683834 EMBL:AL732479 SMR:G3V186
Ensembl:ENST00000464741 Uniprot:G3V186
Length = 755
Score = 143 (55.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 51/218 (23%), Positives = 90/218 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH--NNPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A L + P G GH +N S ++ + + D A+ I I
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITP 524
Query: 551 NRTKMADFTQPYIES--GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWI 608
R + DF++ Y++ G+++ P K+ + ++ +PF +W A VG ++++
Sbjct: 525 ERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPVVGVLIFV 582
Query: 609 LEH----RLNDEFRGPPKRQVV--TIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXX 661
L R + P + W + E +V+++ R
Sbjct: 583 LNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWWLFTL 642
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
SSYTA+L + LTV ++ +PI+ L S + Y
Sbjct: 643 IVCSSYTANLAAFLTVSRMDNPIRTFQDL-SKQVEMSY 679
Score = 131 (51.2 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 82/420 (19%), Positives = 171/420 (40%)
Query: 30 SVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKL--KLQMQDCNHSGFLALA 87
S+++IGA+ F N K ++ + AV D++ + L K+ +++ + N+ F A+
Sbjct: 22 SIIHIGAI--FEENAAKDDRV-FQLAVSDLSLNDDILQSEKITYSIKVIEANNP-FQAVQ 77
Query: 88 EALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQS 147
EA LM +A++ +++ + + + + +P L F +P S + +
Sbjct: 78 EACDLMTQGILALVTSTGCASANALQSLTDAMHIPHL-FVQRNPGGSPRTACHLNPSPDG 136
Query: 148 DQYQMAA---------IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF- 197
+ Y +A+ + +V W++ + Y D ++ G+ + D + +S
Sbjct: 137 EAYTLASRPPVRLNDVMLRLVTELRWQKFVMFY-DSEYDIRGLQSFLDQASRLGLDVSLQ 195
Query: 198 KAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLG-MLGTGYVWIAT 256
K ++ + + L R + P H ++ + T +
Sbjct: 196 KVDKNISHVFTSLFTTMKTEELNRYRDTLRRAILLLSPQGAH--SFINEAVETNLASKDS 253
Query: 257 SWLSTALDTNSPFPSDVMDDIQGVLTL-RTYTPDSVLKRKFISRWRNLTD--AKTPNGYI 313
W+ + + P D++ G +T+ R P + +K ++ GY+
Sbjct: 254 HWVFVNEEISDPEILDLVHSALGRMTVVRQIFPSAKDNQKCTRNNHRISSLLCDPQEGYL 313
Query: 314 G-LNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLL 372
L Y YD+V +LA N+F ++ + + + L+ I+ S + +NGG +
Sbjct: 314 QMLQISNLYLYDSVLMLA---NAFHRKLEDRKWHSMASLNCIR-----KSTKPWNGGRSM 365
Query: 373 RDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGY--------RRIGYWSNYSGLS 424
D+I + ++TG G F D NP Y ++GT Y R++ W + GL+
Sbjct: 366 LDTIKKGHITGLTGVMEFRE--DSSNP-YVQFEILGTTYSETFGKDMRKLATWDSEKGLN 422
>ZFIN|ZDB-GENE-040913-1 [details] [associations]
symbol:grid2 "glutamate receptor, ionotropic, delta
2" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-040913-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 EMBL:AB154207 IPI:IPI00487693
RefSeq:NP_001004123.1 UniGene:Dr.116180 ProteinModelPortal:Q68Y21
SMR:Q68Y21 STRING:Q68Y21 GeneID:448841 KEGG:dre:448841 CTD:2895
InParanoid:Q68Y21 KO:K05207 OrthoDB:EOG4SBDX4 NextBio:20832541
Uniprot:Q68Y21
Length = 1009
Score = 147 (56.8 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 99/425 (23%), Positives = 178/425 (41%)
Query: 30 SVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQ--DCNHSGFLALA 87
S+++IGA+ F + K ++ + AV D+N + L K+ + ++ D N+ F A+
Sbjct: 25 SIIHIGAI--FDESAKKDDEV-FRMAVADLNLNNEILETEKITVSVEFVDGNNP-FQAVQ 80
Query: 88 EALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQS 147
EA LM +A++ +++ + +A+ + +P L P R Q
Sbjct: 81 EACELMNRGILALVSSIGCMSAGSLQSLADAMHIPHLFIQRAPAGTPRSSCPPTTRA-QP 139
Query: 148 DQYQMAA---------IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFK 198
D Y + I ++V Y W++ I Y D D+ GI D + + +S
Sbjct: 140 DDYTLFVRPPVYLNDVIFQVVMEYTWQKFIIFY-DTDYDIRGIENFLDQTSQQGMDVS-- 196
Query: 199 APLSVEATEDEITDLLVKVALTESRIIVVHTHYN--RGPVVFHV-----AQYLGMLGTGY 251
++ E I ++ + T R+ +H + + R V+F A ++ T
Sbjct: 197 ----LQKVESNINMMITGMFRT-MRVEELHRYRDTLRRAVLFMSPATAKAFITEVVETNL 251
Query: 252 VWIATSWLSTALDTNSPFPSD-VMDDIQGVLTL--RTYT-PDSVLKRKFISRWR---NLT 304
V W+ + + + VM I G LTL +T+ P + +R + R +L
Sbjct: 252 VAFDCQWIIINEEISDMDVQELVMKSI-GRLTLVRQTFPLPQNTSQRCVRNNHRINTSLC 310
Query: 305 DAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLR 364
D K P + L Y YDTV LLA N+F ++ + + + LS I R S +
Sbjct: 311 DPKDPKAQM-LEITNRYIYDTVLLLA---NTFHRKLEDRKWHSMASLSCI----RKGS-K 361
Query: 365 IFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVI-----GTGYRRIGYWSN 419
+ GG + +++ + ++G FN +G N +EI+ G G R+ W
Sbjct: 362 PWQGGKSMLETVKKGGVSGLTSLLEFNDNGSNPNIHFEILGTNYGEDRGRGVSRLATWDP 421
Query: 420 YSGLS 424
GL+
Sbjct: 422 IHGLN 426
Score = 137 (53.3 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 51/218 (23%), Positives = 91/218 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A N L + + P +G + + L+ + D + + I
Sbjct: 469 GFSIDVLDALANYLGFKYEIYVAPDHKYGSQQADGTWNGLIGELVFKRADVGLSALTITP 528
Query: 551 NRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILE 610
R + DFT Y++ + V+ + + +A L+PF +W A L VG +V++L
Sbjct: 529 ERESVVDFTTRYMDYSVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGTLVYLLN 588
Query: 611 HRLNDEFRGPPKRQVVTIF---WFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSS 666
LN T++ WF + + E + L R SS
Sbjct: 589 W-LNPPRLPMGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISS 647
Query: 667 YTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
YTA+L + LT+ ++ + I+ + L + ++ P G ++S
Sbjct: 648 YTANLAAFLTISRIENSIQSLQDLAKQTDLPYGTVLDS 685
Score = 119 (46.9 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 53/187 (28%), Positives = 78/187 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-------Y-QVNSFARN-YLVDELN 714
SSYTA+L + LT+ ++ + I+ + L + ++ P G Y QV S N + D +
Sbjct: 646 SSYTANLAAFLTISRIENSIQSLQDLAKQTDLPYGTVLDSAVYDQVRSKGMNPFERDPMY 705
Query: 715 IDESRLVP-LNSPEEYAKALKDGPHKG--GVAAVVDDRAYAELFL--STRCEFSIVGQVF 769
R++ E + K+G K G A V D A E C V
Sbjct: 706 SQMWRMINRTGGAENNVEESKEGIRKVKYGRFAFVWDAAVLEYVAINDEDCSLYTVSNNV 765
Query: 770 TKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLR-SAC---SSQGAKLDVDR 825
G+G A SP S IL+L +NGD+ + KW R S C S G +
Sbjct: 766 ADRGYGMAMQHGSPYRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSPVGTRKSGSA 825
Query: 826 LQLKSFS 832
L + SF+
Sbjct: 826 LDIHSFA 832
Score = 40 (19.1 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 882 SFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCNSNRKHIELSSNLSLDS 931
S V KED+ + + H S +EDE + I+L+ L +DS
Sbjct: 861 SRVPSKEDDKEIDLEHLHHRVNSLCTEDESPHKQFSTSSIDLTP-LDMDS 909
>ZFIN|ZDB-GENE-070821-6 [details] [associations]
symbol:grik5 "glutamate receptor, ionotropic, kainate
5" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-6 GO:GO:0016021
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 EMBL:BX005242 EMBL:CR388405
IPI:IPI00884667 ProteinModelPortal:F1RCX4
Ensembl:ENSDART00000114766 Bgee:F1RCX4 Uniprot:F1RCX4
Length = 716
Score = 157 (60.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 474 VPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIP---FGDGHNNPSCTEL 530
V +++++EF +G+E GFC+D+ ++L + KL+ +G N S T +
Sbjct: 419 VMRKINYQEF---EGNEQYEGFCVDMLRELSDILKFTYRIKLVDDGLYGAPEPNGSWTGM 475
Query: 531 VRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVR-KLDSNAWAFLSPFTP 589
V + D AV I + R K+ DF++P++ G+ ++ V ++FL PF+P
Sbjct: 476 VGELINRKADLAVAAFTITSEREKVIDFSKPFMTLGISILYRVHIGRKPGYFSFLDPFSP 535
Query: 590 MMWGVTAIFFLAVGAVVWILEHRLND-EFRGP 620
+W + +LAV V++ L RL+ E+ P
Sbjct: 536 AVWLFMLLAYLAVSCVLF-LSARLSPYEWYNP 566
Score = 143 (55.4 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 58/215 (26%), Positives = 94/215 (43%)
Query: 518 FGDGHNNPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVR-KL 576
+G N S T +V + D AV I + R K+ DF++P++ G+ ++ V
Sbjct: 463 YGAPEPNGSWTGMVGELINRKADLAVAAFTITSEREKVIDFSKPFMTLGISILYRVHIGR 522
Query: 577 DSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLND-EFRGP-P----KRQVV---- 626
++FL PF+P +W + +LAV V++ L RL+ E+ P P +R ++
Sbjct: 523 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF-LSARLSPYEWYNPHPCLRERRDLLENQY 581
Query: 627 TI---FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSS 682
T+ WF E AL R SSYTA+L + LTVQ++
Sbjct: 582 TLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV 641
Query: 683 PIKGIDSLRS-SNYPIGYQVNSFARNYLVDELNID 716
PI+ D L +N G + ++ L +D
Sbjct: 642 PIESPDDLADQTNIQYGTIHGGSTMTFFMNSLCLD 676
Score = 115 (45.5 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 62/313 (19%), Positives = 130/313 (41%)
Query: 30 SVVNIGALLSFSTNVGKVAKLAIKAAVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAEA 89
S V + A+L S+ G+ +LA+ A +++NS ++++ + + +
Sbjct: 13 SSVRMAAILDDSSVCGRGERLALALARENINSVMENPARARVEVDIFELQKDSQYETTDT 72
Query: 90 L-HLMEGQTVAIIGPQDAVTS-HVVSHVANELQVPLLSFSATD-PTLSSLQFPYFVRTTQ 146
+ ++ V++IGP + S +VSH+ E ++P + + P L L+F V
Sbjct: 73 MCQILPKGVVSVIGPASSPASGSIVSHICGEKEIPHVKIGPEETPRLPYLRFAS-VTLYP 131
Query: 147 SDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
S++ AI I+ + + + + + L + + +R IS + LS+
Sbjct: 132 SNEDLSLAIGSILRSFSYPSASLVCAKAEC----LLRLEELI--RRFLIS-RETLSIRML 184
Query: 207 EDEI--TDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALD 264
+D + T LL ++ + I++ + + ++ A LGM Y +I T+ +D
Sbjct: 185 DDNLDPTPLLKEIRDDKIATIIIDANASISYLILKKASELGMTSAFYKYILTT-----MD 239
Query: 265 TNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLTDAKTPNGYIGLNAYGF 320
+ D++D+ ++ + +FI WR D N Y G
Sbjct: 240 FPLLWLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWREGCDI---NPYPGPALSSA 296
Query: 321 YAYDTVWLLARAI 333
+D V ++ A+
Sbjct: 297 LLFDAVHVVVSAV 309
Score = 93 (37.8 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 55/261 (21%), Positives = 102/261 (39%)
Query: 191 KRCRISFKAPLSVEATEDEI--TDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLG 248
+R IS + LS+ +D + T LL ++ + I++ + + ++ A LGM
Sbjct: 170 RRFLIS-RETLSIRMLDDNLDPTPLLKEIRDDKIATIIIDANASISYLILKKASELGMTS 228
Query: 249 TGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSVLKRKFISR----WRNLT 304
Y +I T+ +D + D++D+ ++ + +FI WR
Sbjct: 229 AFYKYILTT-----MDFPLLWLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWREGC 283
Query: 305 DAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLR 364
D N Y G +D V ++ A+ L+ S++ + L S +
Sbjct: 284 DI---NPYPGPALSSALLFDAVHVVVSAVQE-------LNRSQEIGVKP----LSCTSPQ 329
Query: 365 IFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLS 424
I+ G L + + G G FNS G N I+ G++ IG W YS +
Sbjct: 330 IWQHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHKEIGIW--YSNNT 387
Query: 425 VVRPETLYSKPPNRSSSNQRL 445
++ T + + +N+ L
Sbjct: 388 LLMNSTSLDINVSETLANKSL 408
>WB|WBGene00001614 [details] [associations]
symbol:glr-3 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HSSP:P19491 EMBL:Z75545 PIR:T23570 RefSeq:NP_492017.3
UniGene:Cel.19345 ProteinModelPortal:Q21415 SMR:Q21415
EnsemblMetazoa:K10D3.1 GeneID:172449 KEGG:cel:CELE_K10D3.1
UCSC:K10D3.1 CTD:172449 WormBase:K10D3.1 InParanoid:Q21415
OMA:RIVINIP NextBio:875561 ArrayExpress:Q21415 Uniprot:Q21415
Length = 836
Score = 215 (80.7 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 92/372 (24%), Positives = 161/372 (43%)
Query: 415 GYWSNYSGLSVVRPETLYSKPPNRSSSNQRLYS--VIWPGQTTQKPRGWVFPNNGRHLRI 472
G SNY+ L V R + K SS +R+ S + +++K G+HL+I
Sbjct: 352 GERSNYT-LHVYRRTLSFQKFAEWSSRTRRIASSEAVVIANSSEK-----LTLEGKHLKI 405
Query: 473 GVPNRVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLI---PFGDGHNNPSCTE 529
V F ++ GS G+CID+ N+L + + + +G +N +
Sbjct: 406 SVYLEAPF-VMITSNGSY--EGYCIDLLHKIANILKFTYTIQKVRDNAYGSKESNGKWSG 462
Query: 530 LVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKL-DSNAWAFLSPFT 588
+V + G D AV + I R+++ DFT PY+ G+ ++ ++ DS+ + F+ P +
Sbjct: 463 MVGELQRGDADLAVASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFKFMDPLS 522
Query: 589 PMMWGVTAIFFLAVGAVVWIL------EHRLNDEFRG---PPKRQ--VVTIFWFSFSTMF 637
+W +T + V +WI+ E DE G P Q + FWF+ ++
Sbjct: 523 TQVWIMTFASYFVVSVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTVCSLM 582
Query: 638 FAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYP 696
E A R SSYTA+L ++LT +++ +PI+ D L +
Sbjct: 583 QQGSELCPRAASTRLLTGIWWFFALILISSYTANLAAVLTTRRMETPIENADDLAAQT-K 641
Query: 697 IGY-QVNSFARNYLVDELNIDE-SRLVPL--NSPEEYAKALKDGPHKGGVAAVVDDRAYA 752
I Y + + +E I+ R+ L +SP + ++ K+G A V YA
Sbjct: 642 IKYGTLGRGSTMSFFNESKIETYERMWQLMSSSPGLFVQSSKEG------IARVKSSDYA 695
Query: 753 ELFLSTRCEFSI 764
L S+ E+++
Sbjct: 696 YLMESSMLEYAV 707
Score = 159 (61.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF+ ++ E A R SSYTA+L ++LT +++ +PI+
Sbjct: 574 FWFTVCSLMQQGSELCPRAASTRLLTGIWWFFALILISSYTANLAAVLTTRRMETPIENA 633
Query: 688 DSLRSSNYPIGY-QVNSFARNYLVDELNIDE-SRLVPL--NSPEEYAKALKDGPH--KGG 741
D L + I Y + + +E I+ R+ L +SP + ++ K+G K
Sbjct: 634 DDLAAQT-KIKYGTLGRGSTMSFFNESKIETYERMWQLMSSSPGLFVQSSKEGIARVKSS 692
Query: 742 VAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDL 801
A + + + E + CE +G + + G+G P+ SP ISTAIL+L E +L
Sbjct: 693 DYAYLMESSMLEYAVERDCELMQIGGLIDQKGYGIGLPKGSPYRELISTAILRLQEKTEL 752
Query: 802 QRIHDKWLL-RSACSSQGAKLDVD 824
+ +KW +S Q + D D
Sbjct: 753 TELKEKWWKDKSVVCEQPKRKDQD 776
Score = 56 (24.8 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 21/99 (21%), Positives = 42/99 (42%)
Query: 81 SGFLALAEALHLMEGQTVAIIGPQ-DA--VTSHVVSHVANELQVPLLSFSATDPTLSSLQ 137
+G ++ L L G + I+ Q D + +V +A+ VP +S + PT S
Sbjct: 70 NGLFSVCNCLIL--GASAIILPEQYDGHLAAAAIVQSIADNTNVPCVSLHLSPPTRPSTH 127
Query: 138 F-PYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDD 175
P+ + A+A + W++V+ ++ + D
Sbjct: 128 LHPHL-------NAKSLAVAAFIKREKWKDVVVVFEEPD 159
>UNIPROTKB|Q8TCU5 [details] [associations]
symbol:GRIN3A "Glutamate receptor ionotropic, NMDA 3A"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0042165 "neurotransmitter binding"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045202 "synapse" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISS;IDA] [GO:0045471 "response to ethanol" evidence=IDA]
[GO:0051721 "protein phosphatase 2A binding" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006816
"calcium ion transport" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0014069 GO:GO:0045471 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 DrugBank:DB01161 DrugBank:DB00721
GO:GO:0043025 GO:GO:0016358 GO:GO:0043005 GO:GO:0045202
GO:GO:0060134 DrugBank:DB00142 GO:GO:0048511 GO:GO:0030288
DrugBank:DB00333 DrugBank:DB00514 GO:GO:0006816 DrugBank:DB00392
GO:GO:0051721 EMBL:AL591377 DrugBank:DB00740 DrugBank:DB01043
DrugBank:DB00454 DrugBank:DB01173 DrugBank:DB00949 DrugBank:DB00898
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0016594
DrugBank:DB00659 DrugBank:DB01221 EMBL:AF416558 EMBL:AJ416950
EMBL:AB075853 EMBL:AL356516 EMBL:BC167432 IPI:IPI00455154
RefSeq:NP_597702.2 UniGene:Hs.654783 ProteinModelPortal:Q8TCU5
SMR:Q8TCU5 STRING:Q8TCU5 PhosphoSite:Q8TCU5 DMDM:212276445
PaxDb:Q8TCU5 PRIDE:Q8TCU5 Ensembl:ENST00000361820 GeneID:116443
KEGG:hsa:116443 UCSC:uc004bbp.2 CTD:116443 GeneCards:GC09M104331
H-InvDB:HIX0008248 H-InvDB:HIX0125606 HGNC:HGNC:16767 MIM:606650
neXtProt:NX_Q8TCU5 PharmGKB:PA28983 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 InParanoid:Q8TCU5 KO:K05213
OMA:QSQGEMM OrthoDB:EOG480HW2 BindingDB:Q8TCU5 ChEMBL:CHEMBL4787
GenomeRNAi:116443 NextBio:79919 Bgee:Q8TCU5 CleanEx:HS_GRIN3A
Genevestigator:Q8TCU5 GermOnline:ENSG00000198785 GO:GO:0004972
Uniprot:Q8TCU5
Length = 1115
Score = 220 (82.5 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 111/482 (23%), Positives = 192/482 (39%)
Query: 479 SFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD--GHNNPSCTELVRLITA 536
S + V +K + G+CID+ + + ++ G N T LV +
Sbjct: 563 SSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLR 622
Query: 537 GVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTA 596
G AV +I T R+++ DFT P+ + L ++ R + AF+ P MW
Sbjct: 623 GTAHMAVTSFSINTARSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMW--LG 680
Query: 597 IFFLAVGAVVWILEHRLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHK-EKTVSA------ 647
IF V++ + F PK R +F FS + + +A +TV+
Sbjct: 681 IFVALHITAVFLTLYEWKSPFGLTPKGRNRSKVFSFSSALNICYALLFGRTVAIKPPKCW 740
Query: 648 LGRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQVNS 703
GR S+YTA+L +++ +K+ + GI + S + G S
Sbjct: 741 TGRFLMNLWAIFCMFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRES 800
Query: 704 FARNYLVDELNIDESRLVPLNSPE--EYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTR 759
A +Y+ + N P + + LK+ P K + A + D+A E+ +
Sbjct: 801 SAEDYVRQSFPEMHEYMRRYNVPATPDGVEYLKNDPEK--LDAFIMDKALLDYEVSIDAD 858
Query: 760 CEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG- 818
C+ VG+ F G+G P +SPL +IS I + +G + +HDKW C +
Sbjct: 859 CKLLTVGKPFAIEGYGIGLPPNSPLTANISELISQYKSHGFMDMLHDKWYRVVPCGKRSF 918
Query: 819 AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQ-IVHQFSR-HYPGDTESNGGSSRSAR 876
A + ++ +K FS + + IV++ ++ S R
Sbjct: 919 AVTETLQMGIKHFSGLFVLLCIGFGLSILTTIGEHIVYRLLLPRIKNKSKLQYWLHTSQR 978
Query: 877 LQTFL--SFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN-SNRKHIELSSNLSLDSDT 933
L + SF+ EK+ K+ KR VE+ S +++ N SN H + D +
Sbjct: 979 LHRAINTSFIEEKQQHFKT--KR--VEKRSNVGPRQLTVWNTSNLSHDNRRKYIFSDEEG 1034
Query: 934 RN 935
+N
Sbjct: 1035 QN 1036
>FB|FBgn0004619 [details] [associations]
symbol:GluRIA "Glutamate receptor IA" species:7227
"Drosophila melanogaster" [GO:0006812 "cation transport"
evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;NAS] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812
InterPro:IPR001828 EMBL:M97192 EMBL:BT003218 EMBL:BT050435
PIR:A46421 RefSeq:NP_476855.1 UniGene:Dm.6460
ProteinModelPortal:Q03445 SMR:Q03445 STRING:Q03445 PaxDb:Q03445
EnsemblMetazoa:FBtr0076982 GeneID:38742 KEGG:dme:Dmel_CG8442
CTD:38742 FlyBase:FBgn0004619 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 InParanoid:Q03445 KO:K05313
OMA:EWRIVRR OrthoDB:EOG4WM38M PhylomeDB:Q03445 GenomeRNAi:38742
NextBio:810146 Bgee:Q03445 GermOnline:CG8442 GO:GO:0008328
GO:GO:0004971 GO:GO:0005234 Uniprot:Q03445
Length = 991
Score = 153 (58.9 bits), Expect = 5.9e-14, Sum P(3) = 5.9e-14
Identities = 71/323 (21%), Positives = 129/323 (39%)
Query: 620 PPKR-QVVTIFWFSFSTMFFAHKEKTVSAL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 677
PP ++ FW+S + + T ++ GR SSYTA+L + LTV
Sbjct: 674 PPNEFTMLNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTV 733
Query: 678 QKLSSPIKGIDSLRSS---NYPI---GYQVNSFAR------NYLVDELNIDESRLVPLNS 725
+++ +PIK + L NY G F R N + + +N ++ V ++
Sbjct: 734 ERMVAPIKTPEDLTMQTDVNYGTLLYGSTWEFFRRSQIGLHNKMWEYMNANQHHSV--HT 791
Query: 726 PEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLA 785
+E + ++ KG A +V+ + C+ VG+ G+G A P SPL
Sbjct: 792 YDEGIRRVRQS--KGKYALLVESPKNEYVNARPPCDTMKVGRNIDTKGFGVATPIGSPLR 849
Query: 786 VDISTAILKLSENGDLQRIHDKWLL-RSACSSQGAKLDVDRLQLKSFSXXXXXXXXXXXX 844
++ A+L L ENG+L RI +KW ++ C+ + L L + +
Sbjct: 850 KRLNEAVLTLKENGELLRIRNKWWFDKTECNLDQETSTPNELSLSNVAGIYYILIGGLLL 909
Query: 845 XXFIYLMQIVHQFSRHYPGDTESNGGSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTS 904
+ +M+ F R+ +S G + + + L+ + D + +
Sbjct: 910 AVIVAIMEF---FCRNKTPQLKSPGSNGSAGGVPGMLASSTYQRDSLSDAIMHSQAKLAM 966
Query: 905 YRSEDEMSSCNSNRKHIELSSNL 927
S S + +EL+SN+
Sbjct: 967 QAS----SEYDERLVGVELASNV 985
Score = 98 (39.6 bits), Expect = 5.9e-14, Sum P(3) = 5.9e-14
Identities = 47/252 (18%), Positives = 110/252 (43%)
Query: 369 GNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINV-IGTGYRRIGYWSNYSGLSVVR 427
G + + + + G +G RF+ G IN ++ + + + +++ W + +GL +
Sbjct: 397 GEKISRVLRKVEIDGLSGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAGLLPLH 456
Query: 428 PETLYSKPPNRSSSN---QRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFV 484
S + S+S R ++ I ++P +L + + ++ E
Sbjct: 457 SHNYASSSRSASASTGDYDRNHTYI-VSSLLEEP----------YLSL---KQYTYGE-- 500
Query: 485 SVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNN---PSCTE-LVRLITAGVY 539
S+ G++ G+C D+ L +L+ G+ G N P + +V +
Sbjct: 501 SLVGNDRFEGYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVGELIRKEA 560
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVA--PVRKLDSNAWAFLSPFTPMMWGVTAI 597
D A+ + I R ++ DF++P++ G+ ++ PV++ ++FL+P + +W +
Sbjct: 561 DIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPG-VFSFLNPLSQEIWISVIL 619
Query: 598 FFLAVGAVVWIL 609
++ V V++ +
Sbjct: 620 SYVGVSFVLYFV 631
Score = 69 (29.3 bits), Expect = 5.9e-14, Sum P(3) = 5.9e-14
Identities = 56/253 (22%), Positives = 101/253 (39%)
Query: 101 IGPQDAVTSHVVSHVANELQVPLLSFSATDPTLS-SLQFPYFVRTTQSDQYQMAAIAEIV 159
+ P T H S N Q+P ++ + L+ S F + + D +Q AI + +
Sbjct: 109 VSPDSFDTLHSYS---NTFQMPFVTPWFPEKVLAPSSGLLDFAISMRPDYHQ--AIIDTI 163
Query: 160 DHYGWREVIAIYVDDDHGRNGIAALGDTLAA--KRCRISFKAPLSVEATEDEITDLLVKV 217
+YGW+ +I +Y D G + + L + R+ ++ E L +
Sbjct: 164 QYYGWQSIIYLY-DSHDGLLRLQQIYQELKPGNETFRVQMVKRIANVTMAIEFLHTLEDL 222
Query: 218 A-LTESRIIV-VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMD 275
++ RI++ + +V HV LG +L + L ++ +PSDV++
Sbjct: 223 GRFSKKRIVLDCPAEMAKEIIVQHVRDI--KLGRR----TYHYLLSGLVMDNHWPSDVVE 276
Query: 276 ----DIQG---VLTLRTYTPDSVLKRKFI--SRWRNLTDAKTPNGYIGLNAYGFYAYDTV 326
+I G V + R D RK + S +A PN ++A YD V
Sbjct: 277 FGAINITGFRIVDSNRRAVRDFHDSRKRLEPSGQSQSQNAGGPNSLPAISAQAALMYDAV 336
Query: 327 WLLARAINSFFKQ 339
++L A N ++
Sbjct: 337 FVLVEAFNRILRK 349
>WB|WBGene00001613 [details] [associations]
symbol:glr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 EMBL:FO080148
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 KO:K05313
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 EMBL:AF318606
PIR:T15306 RefSeq:NP_001021113.1 RefSeq:NP_001021114.1
UniGene:Cel.19346 ProteinModelPortal:Q10914 SMR:Q10914
STRING:Q10914 PaxDb:Q10914 PRIDE:Q10914 EnsemblMetazoa:B0280.12b
GeneID:175999 KEGG:cel:CELE_B0280.12 UCSC:B0280.12b CTD:175999
WormBase:B0280.12a WormBase:B0280.12b InParanoid:Q10914 OMA:MTPPIES
NextBio:890672 Uniprot:Q10914
Length = 977
Score = 166 (63.5 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 55/232 (23%), Positives = 105/232 (45%)
Query: 486 VKGSEMTSGFCIDVFTA-AINLLPYAVPYKLIP---FGDGHNNPSCTELVRLITAGVYDA 541
+KG++ G+CID+ A N+ + + +G + S ++ + D
Sbjct: 512 LKGNDRFEGYCIDLLNLLAKNITGFEYDVFISDGNKYGSRQADGSWDGMIGYLLNETADV 571
Query: 542 AVGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVT-AIFF 599
AV + I R + DF++P++ +G+ +++ K + N ++F+ P +W T + +F
Sbjct: 572 AVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYF 631
Query: 600 ---LAVGAVVWILEHRLNDEF-RGP-PKRQVVTIF---WFSFSTMFFAHKEKTVSAL-GR 650
L + V W + EF RG T++ WF+ + + A+ GR
Sbjct: 632 GVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRAVSGR 691
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVN 702
SSYTA+L + LT+++++ PI+ ++ L + N I Y VN
Sbjct: 692 IASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVEDLANQN-KILYGVN 742
Score = 100 (40.3 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 760 CEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSS 816
C+ VGQ G+G A +PL V ++ AIL LSE G+L+++ +KW R C +
Sbjct: 826 CDTMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGELKKLENKWWYDRGQCDT 883
Score = 56 (24.8 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 21/76 (27%), Positives = 43/76 (56%)
Query: 111 VVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQ--YQMAAIAE--IVDH--Y-G 163
+ +AN +++PL+ + +P+ S +TT+++ + +A AE ++D+ Y G
Sbjct: 108 IYEDIANHMKMPLIDW---EPSKSE----NIGKTTENNPMIFSVAPSAEQLLIDYIQYKG 160
Query: 164 WREVIAIYVDDDHGRN 179
WR+V+ Y+ D G+N
Sbjct: 161 WRDVV--YIHD--GKN 172
Score = 40 (19.1 bits), Expect = 6.3e-14, Sum P(4) = 6.3e-14
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 264 DTNSPFPSDVMDDIQGVLTLRTYT---PDSVLKRK 295
+ + P P +V+ D++G R + +SVL +K
Sbjct: 232 EIDEPIPVNVIVDLEGSYRTRAFLRALEESVLVKK 266
>UNIPROTKB|K7GSB6 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 InterPro:IPR001828
GeneTree:ENSGT00590000083056 EMBL:AEMK01188348 EMBL:CU062538
EMBL:CU407189 EMBL:CU457396 EMBL:CU928568
Ensembl:ENSSSCT00000032833 Uniprot:K7GSB6
Length = 573
Score = 123 (48.4 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 40/165 (24%), Positives = 74/165 (44%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN---NPSCTELVRLITAGVYDAAV 543
G++ G+CID+ +L + +L+ G G N +VR + D AV
Sbjct: 406 GNDRFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAV 465
Query: 544 GDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAV 602
+AI R K+ DF++P++ G+ ++ + ++FL+P +P +W + +L V
Sbjct: 466 APLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGV 525
Query: 603 GAVVWILEHRLNDEFRGP----PKRQVV----TI---FWFSFSTM 636
V++++ E+ P P VV T+ FWF +
Sbjct: 526 SCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGAL 570
Score = 122 (48.0 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 65/294 (22%), Positives = 122/294 (41%)
Query: 49 KLAIKAAVDDVNSDPTTLGGTKLKLQMQDCN-HSGFLALAEALHLMEGQTVAIIGPQDAV 107
+LA + AV+ +N + T L T L Q N + F A +A + AI GP +
Sbjct: 5 ELAFRFAVNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSS 64
Query: 108 TSHVVSHVANELQVPLLSFSATDPTLSSLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREV 167
+++ V + N L VP + + +S + ++V AI ++V + W+ V
Sbjct: 65 SANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTV 123
Query: 168 IAIYVDDDHGRNGIAALGDTLAA-KRCRISFKAPLSVEATEDEITDLLVKVALTESRIIV 226
+Y DD G+ L + + A R + K T+D LL ++ + ++
Sbjct: 124 TVVY-DDS---TGLIRLQELIKAPSRYNLRLKIRQLPADTKDA-KPLLKEMKRGKEFHVI 178
Query: 227 VHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTY 286
+ + A +GM+ Y +I T+ ALD S V ++ G L T
Sbjct: 179 FDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGV--NMTGFRILNTE 236
Query: 287 TPD--SVLKRKFISRWRN--LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSF 336
S++++ + R + D+ +G++ +A YD V +++ + F
Sbjct: 237 NTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAA--LMYDAVHVVSVGVQQF 288
Score = 67 (28.6 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 369 GNLLRDSILQANMTGTAGPARFN-SHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
G I +A+ G G FN ++G + ++I++ G +IG W SGL++
Sbjct: 307 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT- 365
Query: 428 PETLYSKPPN--RSSSNQRL 445
E+ KP N S SN+ L
Sbjct: 366 -ESQKGKPANITDSLSNRSL 384
>ZFIN|ZDB-GENE-020125-3 [details] [associations]
symbol:gria2a "glutamate receptor, ionotropic, AMPA
2a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05198 EMBL:AF525743
IPI:IPI00486705 RefSeq:NP_571969.1 UniGene:Dr.107958
ProteinModelPortal:Q71E63 SMR:Q71E63 PRIDE:Q71E63 GeneID:170450
KEGG:dre:170450 CTD:170450 InParanoid:Q71E63 NextBio:20797091
ArrayExpress:Q71E63 Bgee:Q71E63 Uniprot:Q71E63
Length = 875
Score = 140 (54.3 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 70/315 (22%), Positives = 119/315 (37%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGPPKRQ----VVTIFWFSFSTMFFAHKEKTVS 646
GV+ + FL W E D GP + + WFS + +
Sbjct: 549 GVSVVLFLVSRFSPYEWHTEE-FEDGQLGPSESTNEFGIFNSLWFSLGAFMRQGCDISPR 607
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY---QVN 702
+L GR SSYTA+L + LTV+++ SPI+ + L I Y
Sbjct: 608 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQT-EIAYGTLDAG 666
Query: 703 SFARNYLVDELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
S + ++ + + + S P + K +G KG A +++ +
Sbjct: 667 STKEFFRRSKIALFDKMWQYMKSAEPSVFVKNTVEGVLRVRKSKGKYAYLLESTMNEYIE 726
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C
Sbjct: 727 QRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 786
Query: 815 SSQG--AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQIVH----QFSRHYPGDTESN 868
S G +K L L + + + L++ + + R T++
Sbjct: 787 GSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSRAEAKRMKVAKTQAL 846
Query: 869 GGSSRSARLQTFLSF 883
SS S Q F ++
Sbjct: 847 NPSSSSQNSQNFATY 861
Score = 132 (51.5 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 52/223 (23%), Positives = 93/223 (41%)
Query: 489 SEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVYDAA 542
+E G+C+D+ AA Y+L DG E +V + G D A
Sbjct: 432 NERYEGYCVDL--AAEIAKHCGFKYQLRIVADGKYGARDAETKIWNGMVGELVYGKADIA 489
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLA 601
V + I R ++ DF++P++ G+ +++ +K ++FL P +W ++
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 602 VGAVVWILEHRL-----NDEFR----GPPKRQ----VVTIFWFSFSTMFFAHKEKTVSAL 648
V V++++ +EF GP + + WFS + + +L
Sbjct: 550 VSVVLFLVSRFSPYEWHTEEFEDGQLGPSESTNEFGIFNSLWFSLGAFMRQGCDISPRSL 609
Query: 649 -GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 610 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 652
Score = 130 (50.8 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 57/317 (17%), Positives = 122/317 (38%)
Query: 155 IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITD 212
+ +V++Y W + +Y D D G + + A+ DT A ++ +++ L E ++
Sbjct: 131 LISLVEYYKWEKFAYLY-DSDRGLSTLQAVLDTAAERKWQVTAINVGNLKDEWKDEAYRS 189
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
L + R +++ ++ + +G GY +I ++ D S
Sbjct: 190 LFQDLENKNERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANFGFVDGDL-----SK 244
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
+ V + D L KF RW L + + P + YD V ++ A
Sbjct: 245 IQYGGANVSGFQIVDFDDPLVAKFDQRWEALEEKEYPGADSRIRYTSALTYDAVQVMTEA 304
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
KQ + S+ D L ++ G + R ++ Q + G G +F+
Sbjct: 305 FRFLHKQ--RIDISRRGNNGDC---LANPAVPWAQGVEIER-ALKQVRVDGLTGNIQFDQ 358
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPG 452
+G +N ++ + +G +IGYW+ ++V + + + + + +++
Sbjct: 359 YGRRVNYTVNVMELKNSGPVKIGYWNEMDKMAVTKSDLFPNDTMGMENKTVIVTTILEAP 418
Query: 453 QTTQKPRGWVFPNNGRH 469
K +F +N R+
Sbjct: 419 YVMLKKNAELFTDNERY 435
Score = 49 (22.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 17/76 (22%), Positives = 37/76 (48%)
Query: 145 TQSDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRIS 196
T +++Y+ + AEI H G++ + I D +G R+ + + + + + I+
Sbjct: 430 TDNERYEGYCVDLAAEIAKHCGFKYQLRIVADGKYGARDAETKIWNGMVGELVYGKADIA 489
Query: 197 FKAPLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 490 V-APLTITLVREEVID 504
>MGI|MGI:95811 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA4 (alpha 4)"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050804 "regulation of
synaptic transmission" evidence=ISO] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95811 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0045202 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2893 KO:K05200 OrthoDB:EOG4DBTD0 ChiTaRS:GRIA4
GO:GO:0032983 EMBL:AB022913 EMBL:AB079073 EMBL:BC060697
IPI:IPI00131471 RefSeq:NP_001106651.1 RefSeq:NP_001106652.1
RefSeq:NP_062665.3 UniGene:Mm.209263 ProteinModelPortal:Q9Z2W8
SMR:Q9Z2W8 IntAct:Q9Z2W8 STRING:Q9Z2W8 PhosphoSite:Q9Z2W8
PaxDb:Q9Z2W8 PRIDE:Q9Z2W8 Ensembl:ENSMUST00000063508 GeneID:14802
KEGG:mmu:14802 UCSC:uc009obo.2 InParanoid:Q9Z2W8 BindingDB:Q9Z2W8
ChEMBL:CHEMBL3615 NextBio:286965 Bgee:Q9Z2W8 CleanEx:MM_GRIA4
Genevestigator:Q9Z2W8 GermOnline:ENSMUSG00000025892 Uniprot:Q9Z2W8
Length = 902
Score = 144 (55.7 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 61/258 (23%), Positives = 104/258 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKLSE G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGEC 795
Query: 815 SSQ--GAKLDVDRLQLKS 830
+ G+K L L +
Sbjct: 796 GPKDSGSKDKTSALSLSN 813
Score = 137 (53.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 126 (49.4 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 52/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
S +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRSLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>UNIPROTKB|G3V6W0 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
CTD:2893 KO:K05200 RefSeq:NP_058959.2 UniGene:Rn.10938 GeneID:29629
KEGG:rno:29629 NextBio:609852 ProteinModelPortal:G3V6W0
Ensembl:ENSRNOT00000009514 Uniprot:G3V6W0
Length = 902
Score = 144 (55.7 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 61/258 (23%), Positives = 104/258 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKLSE G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGEC 795
Query: 815 SSQ--GAKLDVDRLQLKS 830
+ G+K L L +
Sbjct: 796 GPKDSGSKDKTSALSLSN 813
Score = 137 (53.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 126 (49.4 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 52/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
S +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRSLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>UNIPROTKB|B7Z7L0 [details] [associations]
symbol:GRID1 "Glutamate receptor ionotropic, delta-1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 GO:GO:0005234 GO:GO:0004970 UniGene:Hs.530653
HGNC:HGNC:4575 OrthoDB:EOG4ZCT3V EMBL:AL844892 EMBL:AC022028
EMBL:AC073162 EMBL:AC079955 EMBL:AL451059 EMBL:AL596135
EMBL:AL683834 EMBL:AL732479 EMBL:AK302192 IPI:IPI01012961
SMR:B7Z7L0 STRING:B7Z7L0 Ensembl:ENST00000536331 HOVERGEN:HBG106261
Uniprot:B7Z7L0
Length = 580
Score = 143 (55.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 51/218 (23%), Positives = 90/218 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH--NNPSCTELVRLITAGVYDAAVGDIAIIT 550
GF IDV A L + P G GH +N S ++ + + D A+ I I
Sbjct: 36 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAITITP 95
Query: 551 NRTKMADFTQPYIES--GLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWI 608
R + DF++ Y++ G+++ P K+ + ++ +PF +W A VG ++++
Sbjct: 96 ERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPVVGVLIFV 153
Query: 609 LEH----RLNDEFRGPPKRQVV--TIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXX 661
L R + P + W + E +V+++ R
Sbjct: 154 LNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWWLFTL 213
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
SSYTA+L + LTV ++ +PI+ L S + Y
Sbjct: 214 IVCSSYTANLAAFLTVSRMDNPIRTFQDL-SKQVEMSY 250
Score = 122 (48.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 52/188 (27%), Positives = 78/188 (41%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQV--NSFARNYL----VDELNIDES 718
SSYTA+L + LTV ++ +PI+ L S + Y +S Y + L D +
Sbjct: 217 SSYTANLAAFLTVSRMDNPIRTFQDL-SKQVEMSYGTVRDSAVYEYFRAKGTNPLEQDST 275
Query: 719 -----RLVPLNS-PEEYAKALKDGPHKG--GVAAVVDDRAYAELFLSTR--CEFSIVGQV 768
R + N + + +G K G A + D A E T C +++G
Sbjct: 276 FAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNS 335
Query: 769 FTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDVD 824
+ G+G A SP S IL+L + GDL + KW C S A+ D
Sbjct: 336 ISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTSHASAQADGK 395
Query: 825 RLQLKSFS 832
L+L SF+
Sbjct: 396 SLKLHSFA 403
>UNIPROTKB|F1PEI5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 OMA:CSFYTVG
EMBL:AAEX03016767 EMBL:AAEX03016766 Ensembl:ENSCAFT00000015920
GeneTree:ENSGT00610000087353 Uniprot:F1PEI5
Length = 922
Score = 216 (81.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 164/746 (21%), Positives = 283/746 (37%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF-KAPLSVEATED 208
Y I +V Y W++ I Y D ++ GI D ++ + ++ K ++
Sbjct: 66 YLNDVILRVVTEYAWQKFIIFY-DSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMIT 124
Query: 209 EITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSP 268
+ D L L R + P + ++ T V W+ + N
Sbjct: 125 TLFDTLRIEELNRYRDTLRRAILVMNPATAK-SFITEVVETNLVAFDCHWIIINEEINDV 183
Query: 269 FPSDVMDDIQGVLTL--RTY-TPDSVLKRKFISRWR---NLTDAKTPNGYIGLNAYGFYA 322
+++ G LT+ +T+ P ++ +R F R L D K P + Y
Sbjct: 184 DVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQ-NMEISNLYI 242
Query: 323 YDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMT 382
YDTV LLA N+F K+ + + + LS I R +S + + GG + ++I + ++
Sbjct: 243 YDTVLLLA---NAFHKKLEDRKWHSMASLSCI----RKNS-KPWQGGRSMLETIKKGGVS 294
Query: 383 GTAGPARFNSHGDLINPAYEIINV-----IGTGYRRIGYWSNYSGLSVVRPETLYSKPPN 437
G G F +G N +EI+ +G G R++G W+ +GL+ +L K
Sbjct: 295 GLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN----GSLTDK--- 347
Query: 438 RSSSNQRLYSVIWPGQTT-QKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTSGFC 496
+ +N R V+ T ++P V N +G P + + GF
Sbjct: 348 KLENNMR--GVVLRVVTVLEEPFVMVSENV-----LGKPKKYQGFSIDVLDALSNYLGFN 400
Query: 497 IDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELV-RLITAGVYDAAVGDIA--IITNRT 553
+++ A + Y P + DG N ELV + G+ + ++ T
Sbjct: 401 YEIYVAPDH--KYGSPQE-----DGTWNGLVGELVFKRADIGISALTITPDRENVVDFTT 453
Query: 554 KMADFTQPYI----ESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWIL 609
+ D++ + E + + A + D + WA ++ G + L V + W+
Sbjct: 454 RYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIA-------GTVLLVGLLVYLLNWLN 506
Query: 610 EHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYT 668
RL + + WF + + E + L R SSYT
Sbjct: 507 PPRL--QMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYT 564
Query: 669 ASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-------YQ------VNSFARNYLVDEL- 713
A+L + LT+ ++ S I+ + L + ++ P G Y+ +N F R+ + ++
Sbjct: 565 ANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYEHVRMKGMNPFERDSMYSQMW 624
Query: 714 -NIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFL--STRCEFSIVGQVFT 770
I+ S N E A K K G A V D A E C F +G
Sbjct: 625 RMINRSNGSENNVLESQAGIQKV---KYGNYAFVWDAAVLEYVAINDPDCSFYTIGNTVA 681
Query: 771 KNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLDVDRL 826
G+G A SP S IL+L +NGD+ + KW ++ C SS K L
Sbjct: 682 DRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCALYSSVDTKQKGGAL 741
Query: 827 QLKSFSXXXXXXXXXXXXXXFIYLMQ 852
+KSF+ FI +++
Sbjct: 742 DIKSFAGVFCILAAGIVLSCFIAMLE 767
>FB|FBgn0039916 [details] [associations]
symbol:CG9935 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0060025 "regulation
of synaptic activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR001828 EMBL:AE014135 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0015277 RefSeq:NP_001036250.1 UniGene:Dm.14094
ProteinModelPortal:Q0KIF2 SMR:Q0KIF2 STRING:Q0KIF2 PRIDE:Q0KIF2
EnsemblMetazoa:FBtr0110906 GeneID:43806 KEGG:dme:Dmel_CG9935
UCSC:CG9935-RB FlyBase:FBgn0039916 OMA:MISQIAN OrthoDB:EOG48CZB3
PhylomeDB:Q0KIF2 GenomeRNAi:43806 NextBio:835962 Bgee:Q0KIF2
Uniprot:Q0KIF2
Length = 899
Score = 164 (62.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 48/190 (25%), Positives = 84/190 (44%)
Query: 629 FWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGI 687
FWF+ T + A+ R +SYTA+L + LT +++ +PI+
Sbjct: 583 FWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENA 642
Query: 688 DSLRSSNYPIGY------QVNSFARNYLVDELNIDESRLVPLNSPEEYAKALKDG---PH 738
+ L S I Y +F R+ +++ R + P + +DG +
Sbjct: 643 EDLASQT-EISYGTLDSGSTMTFFRDSVIETYK-KIWRSMDNKKPSAFTTTYEDGIKRVN 700
Query: 739 KGGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSEN 798
+G A +++ + + C + +G + G+G A P+ SP IS AIL+L E
Sbjct: 701 QGNYAFLMES-TMLDYIVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQER 759
Query: 799 GDLQRIHDKW 808
GD+Q ++DKW
Sbjct: 760 GDIQMLYDKW 769
Score = 135 (52.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 51/229 (22%), Positives = 96/229 (41%)
Query: 488 GSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHNNPSCTE---LVRLITAGVYDAAV 543
G+E GFC+D+ + + L+P G +P E +V + D AV
Sbjct: 426 GNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAV 485
Query: 544 GDIAIITNRTKMADFTQPYIESGLVVVAPVRKLD-SNAWAFLSPFTPMMWGVTAIFFLAV 602
G + I R + DFT+P++ G+ ++ V + + ++F++P +W I + V
Sbjct: 486 GSMTITYARESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLV 545
Query: 603 GAVVWILEHRLNDEFR--GPPKRQVVTI---------FWFSFSTMFFAHKEKTVSALG-R 650
++I+ E++ + ++I FWF+ T + A+ R
Sbjct: 546 SLCIYIVGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTR 605
Query: 651 XXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGY 699
+SYTA+L + LT +++ +PI+ + L S I Y
Sbjct: 606 IISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDLASQT-EISY 653
Score = 96 (38.9 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 10 MIFYCELFVYRITAQASGRPSVVNIGALLSFSTNVGKV-AKLAIKAAVDDVNSDPTTLGG 68
M+ +++ + G P +V IGA+ FS G ++LA + A+ +N D + L
Sbjct: 1 MLIASGFLLFQFLSYGLGVPPLVRIGAI--FSNQPGMYNSELAFRYAIHRLNMDKSLLPE 58
Query: 69 TKLKLQMQDCNH-SGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFS 127
T + ++ N F + + L+ A+ P D+V + ++ + + L +P + S
Sbjct: 59 TTVDYYVEYVNRFDSFETVQKVCKLIRVGVQAVFSPTDSVLATHINSICDALDIPNIGRS 118
Query: 128 ATD 130
A D
Sbjct: 119 AHD 121
Score = 55 (24.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 13/67 (19%), Positives = 29/67 (43%)
Query: 366 FNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSV 425
++GG L + + G GP +F G + ++I + ++G W+ + L++
Sbjct: 331 WDGGLSLINYLNAVEWKGLTGPIQFKD-GQRVQFKLDLIKLKQHSIVKVGEWTPHGHLNI 389
Query: 426 VRPETLY 432
P +
Sbjct: 390 TEPSMFF 396
>UNIPROTKB|P48058 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISS]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISS]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISS]
[GO:0006810 "transport" evidence=TAS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0043195 GO:GO:0051968
DrugBank:DB00142 GO:GO:0032281 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:U16129 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 EMBL:BC045546
EMBL:BC142654 EMBL:BC150209 IPI:IPI00007632 IPI:IPI00791228
RefSeq:NP_000820.3 RefSeq:NP_001070711.2 RefSeq:NP_001070712.1
RefSeq:NP_001106283.1 UniGene:Hs.503743 ProteinModelPortal:P48058
SMR:P48058 MINT:MINT-95403 STRING:P48058 PhosphoSite:P48058
DMDM:218512059 PRIDE:P48058 DNASU:2893 Ensembl:ENST00000282499
Ensembl:ENST00000393125 Ensembl:ENST00000428631
Ensembl:ENST00000530497 GeneID:2893 KEGG:hsa:2893 UCSC:uc001pix.2
CTD:2893 GeneCards:GC11P105514 H-InvDB:HIX0026176 HGNC:HGNC:4574
MIM:138246 neXtProt:NX_P48058 PharmGKB:PA28969 InParanoid:P48058
KO:K05200 OMA:RIGYWND OrthoDB:EOG4DBTD0 PhylomeDB:P48058
BindingDB:P48058 ChEMBL:CHEMBL3190 ChiTaRS:GRIA4 GenomeRNAi:2893
NextBio:11443 ArrayExpress:P48058 Bgee:P48058 CleanEx:HS_GRIA4
Genevestigator:P48058 GO:GO:0032983 Uniprot:P48058
Length = 902
Score = 144 (55.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 61/258 (23%), Positives = 104/258 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKLSE G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGEC 795
Query: 815 SSQ--GAKLDVDRLQLKS 830
+ G+K L L +
Sbjct: 796 GPKDSGSKDKTSALSLSN 813
Score = 137 (53.3 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 125 (49.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 52/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTPMVI---KLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
S +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRSLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>UNIPROTKB|G3V6W1 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 CTD:2893 KO:K05200 OMA:RIGYWND
RefSeq:NP_001106655.1 UniGene:Rn.10938 GeneID:29629 KEGG:rno:29629
NextBio:609852 ProteinModelPortal:G3V6W1 Ensembl:ENSRNOT00000009542
Uniprot:G3V6W1
Length = 902
Score = 142 (55.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 58/244 (23%), Positives = 99/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 795
Query: 815 SSQG 818
S G
Sbjct: 796 GSGG 799
Score = 137 (53.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 126 (49.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 52/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
S +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRSLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>UNIPROTKB|G3V164 [details] [associations]
symbol:GRIA4 "Glutamate receptor, ionotrophic, AMPA 4,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471065 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 UniGene:Hs.503743
HGNC:HGNC:4574 ChiTaRS:GRIA4 EMBL:AP001023 SMR:G3V164
Ensembl:ENST00000393127 Ensembl:ENST00000525187 Uniprot:G3V164
Length = 884
Score = 142 (55.0 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 58/244 (23%), Positives = 99/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 795
Query: 815 SSQG 818
S G
Sbjct: 796 GSGG 799
Score = 137 (53.3 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 125 (49.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 52/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTPMVI---KLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
S +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRSLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>UNIPROTKB|F1N946 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0043005 GO:GO:0030288 GO:GO:0017146
GO:GO:0005234 GO:GO:0016594 GeneTree:ENSGT00700000104113
OMA:QSQGEMM GO:GO:0004972 EMBL:AADN02074600 EMBL:AADN02074601
EMBL:AADN02074602 EMBL:AADN02074603 EMBL:AADN02074604
EMBL:AADN02074605 IPI:IPI00813775 Ensembl:ENSGALT00000025070
ArrayExpress:F1N946 Uniprot:F1N946
Length = 990
Score = 214 (80.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 106/453 (23%), Positives = 186/453 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD--GHNNPSCTELVRLITAGVYDAAVGDIAIITN 551
G+CID+ + + ++ G N T LV + +G AV +I T
Sbjct: 455 GYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGTAHMAVTSFSINTA 514
Query: 552 RTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEH 611
R+++ DFT P+ + L ++ R + AF+ P MW IF V++ +
Sbjct: 515 RSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMW--LGIFVALHITAVFLTLY 572
Query: 612 RLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHKEKTVSAL-------GRXXXXXXXXXXXX 662
F PK R +F FS + + +A +A+ GR
Sbjct: 573 EWKSPFGMTPKGRNRNKVFSFSSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAIFCLF 632
Query: 663 XNSSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQVNSFARNYL---VDELNI 715
S+YTA+L +++ +K+ + GI + S + G S A +Y+ E++
Sbjct: 633 CLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEMHE 692
Query: 716 DESRL-VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTRCEFSIVGQVFTKN 772
R VP +P+ A LK+ P K + A + D+A E+ + C+ VG+ F
Sbjct: 693 YMRRYNVPA-TPDGVAY-LKNDPEK--LDAFIMDKALLDYEVSIDADCKLLTVGKPFAIE 748
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG-AKLDVDRLQLKSF 831
G+G P +SPL +IS I + +G + +HDKW C + A + ++ +K F
Sbjct: 749 GYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHF 808
Query: 832 SXXXXXXXXXXXXXXFIYLMQ-IVHQFSR-HYPGDTESNGGSSRSARLQTFL--SFVNEK 887
S + + IV++ ++ S RL L SF+ ++
Sbjct: 809 SGLFVMLCIGFVLSILTTIGEHIVYRLVLPRIKKKSKMKYWLHTSQRLHRALNSSFIEDR 868
Query: 888 -EDEVKSRSKRRHVERTSYRSEDEMSSCNSNRK 919
+ + K KR HV + + + ++ N +RK
Sbjct: 869 RQTKTKRAEKRSHVGNSQHAVWNTANTGNCHRK 901
>UNIPROTKB|E2RIZ6 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:RIGYWND EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023560 Uniprot:E2RIZ6
Length = 854
Score = 144 (55.7 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 59/251 (23%), Positives = 101/251 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKLSE G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGEC 795
Query: 815 SSQGAKLDVDR 825
+ + V R
Sbjct: 796 GPKDSGSKVSR 806
Score = 137 (53.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 122 (48.0 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 51/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQHGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+ +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRNLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>UNIPROTKB|F1M6H8 [details] [associations]
symbol:F1M6H8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000337 PRINTS:PR00248 Pfam:PF01094
GO:GO:0016021 GO:GO:0004930 InterPro:IPR001828 IPI:IPI00782640
ProteinModelPortal:F1M6H8 Ensembl:ENSRNOT00000057634 OMA:NIFRTIP
Uniprot:F1M6H8
Length = 474
Score = 208 (78.3 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 49/169 (28%), Positives = 92/169 (54%)
Query: 98 VAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSS-LQFPYFVRTTQSDQYQMAAIA 156
V IIG + S VS + + +P + ++++ P LS +QFP RT SD++Q AI
Sbjct: 153 VGIIGAGGSTMSIAVSRILGDYYIPQVGYASSSPILSDRIQFPNIFRTIPSDKFQSEAIV 212
Query: 157 EIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVK 216
++ H+GW V AI DDD+G++G+ +L + I+F + + +++ + +
Sbjct: 213 NLIRHFGWVWVGAIATDDDYGKHGVKSLRKKMELSNLCIAFSETIPKVYSNEKMQIAVNE 272
Query: 217 VALTESRIIVVH-THYNRGPVVFHVAQYLGMLGTGYVWIAT-SWLSTAL 263
V + +++IV++ T + P V V + + T WIA+ +W+++AL
Sbjct: 273 VKKSTAKVIVLYATDIHLSPFVLEVVHH-NI--TDRTWIASEAWITSAL 318
>UNIPROTKB|Q38PU5 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISS] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
GO:GO:0032983 EMBL:DQ159932 ProteinModelPortal:Q38PU5 SMR:Q38PU5
Uniprot:Q38PU5
Length = 902
Score = 141 (54.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 58/244 (23%), Positives = 99/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLGNAVNLAVLKLNEPGLLDKLKNKWWYDKGEC 795
Query: 815 SSQG 818
S G
Sbjct: 796 GSGG 799
Score = 137 (53.3 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 125 (49.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 52/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTPMVI---KLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
S +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRSLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>RGD|61863 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IMP;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007268 "synaptic
transmission" evidence=IMP;TAS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA;IMP] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050803
"regulation of synapse structure and activity" evidence=TAS]
[GO:0050804 "regulation of synaptic transmission" evidence=IMP]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069
GO:GO:0060992 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0050803 GO:GO:0043195 GO:GO:0051968 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893
KO:K05200 OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037
EMBL:M38063 EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131
IPI:IPI00231132 PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1
RefSeq:NP_058959.2 UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS
PDB:3FAT PDB:3KEI PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE
PDBsum:3FAS PDBsum:3FAT PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA
ProteinModelPortal:P19493 SMR:P19493 DIP:DIP-41142N MINT:MINT-86166
STRING:P19493 TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493
GeneID:29629 KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493
BindingDB:P19493 ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493
NextBio:609852 ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 140 (54.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 58/244 (23%), Positives = 98/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYTE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 795
Query: 815 SSQG 818
S G
Sbjct: 796 GSGG 799
Score = 137 (53.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 126 (49.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 52/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
S +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRSLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>UNIPROTKB|P19493 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069 GO:GO:0060992
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0050803
GO:GO:0043195 GO:GO:0051968 GO:GO:0032281 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893 KO:K05200
OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037 EMBL:M38063
EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131 IPI:IPI00231132
PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1 RefSeq:NP_058959.2
UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS PDB:3FAT PDB:3KEI
PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE PDBsum:3FAS PDBsum:3FAT
PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA ProteinModelPortal:P19493
SMR:P19493 DIP:DIP-41142N MINT:MINT-86166 STRING:P19493
TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493 GeneID:29629
KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493 BindingDB:P19493
ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493 NextBio:609852
ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 140 (54.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 58/244 (23%), Positives = 98/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 557 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 615
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 616 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++
Sbjct: 676 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYTE 735
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C
Sbjct: 736 QRKPCDTMKVGGNLDSKGYGVATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 795
Query: 815 SSQG 818
S G
Sbjct: 796 GSGG 799
Score = 137 (53.3 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 438 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 497
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 498 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 558 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 616
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 617 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 126 (49.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 52/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 257 A--NVTGFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 311
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
S +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 312 FRSLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVRIQGLTGNVQFDH 365
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 366 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 400
Score = 50 (22.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 498
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 499 APLTITLVREEVID 512
>UNIPROTKB|I3L8N9 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AEMK01190335 EMBL:CU855529
EMBL:CU972413 EMBL:FP312660 Ensembl:ENSSSCT00000027751
Uniprot:I3L8N9
Length = 883
Score = 142 (55.0 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 58/244 (23%), Positives = 99/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 538 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 596
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 597 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 656
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 657 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 716
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C
Sbjct: 717 QRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 776
Query: 815 SSQG 818
S G
Sbjct: 777 GSGG 780
Score = 137 (53.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 419 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 478
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 479 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 538
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 539 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 597
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 598 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 642
Score = 123 (48.4 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 51/275 (18%), Positives = 105/275 (38%)
Query: 154 AIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-EITD 212
A+ ++DHY W + +Y D D G + + A+ + +S + VE D
Sbjct: 122 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 177
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
LL ++ + + V+ R + +G GY +I + +
Sbjct: 178 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 237
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
++ G + TP + K + RW+ L + P YD V ++A
Sbjct: 238 A--NVTGFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAET 292
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
+ +Q + S+ D + + G + ++ Q + G G +F+
Sbjct: 293 FRNLRRQ--KIDISRRGNAGDCLANPAAP----WGQGIDMERTLKQVQIQGLTGNVQFDH 346
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVR 427
+G +N ++ + TG R++GYW++ L +++
Sbjct: 347 YGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQ 381
Score = 50 (22.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 421 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 479
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 480 APLTITLVREEVID 493
>UNIPROTKB|F1N947 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 EMBL:AADN02074600
EMBL:AADN02074601 EMBL:AADN02074602 EMBL:AADN02074603
EMBL:AADN02074604 EMBL:AADN02074605 IPI:IPI00682164
Ensembl:ENSGALT00000025069 ArrayExpress:F1N947 Uniprot:F1N947
Length = 667
Score = 209 (78.6 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 90/361 (24%), Positives = 153/361 (42%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD--GHNNPSCTELVRLITAGVYDAAVGDIAIITN 551
G+CID+ + + ++ G N T LV + +G AV +I T
Sbjct: 232 GYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGTAHMAVTSFSINTA 291
Query: 552 RTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAVVWILEH 611
R+++ DFT P+ + L ++ R + AF+ P MW IF V++ +
Sbjct: 292 RSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMW--LGIFVALHITAVFLTLY 349
Query: 612 RLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHKEKTVSAL-------GRXXXXXXXXXXXX 662
F PK R +F FS + + +A +A+ GR
Sbjct: 350 EWKSPFGMTPKGRNRNKVFSFSSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAIFCLF 409
Query: 663 XNSSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQVNSFARNYL---VDELNI 715
S+YTA+L +++ +K+ + GI + S + G S A +Y+ E++
Sbjct: 410 CLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEMHE 469
Query: 716 DESRL-VPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTRCEFSIVGQVFTKN 772
R VP +P+ A LK+ P K + A + D+A E+ + C+ VG+ F
Sbjct: 470 YMRRYNVPA-TPDGVAY-LKNDPEK--LDAFIMDKALLDYEVSIDADCKLLTVGKPFAIE 525
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG-AKLDVDRLQLKSF 831
G+G P +SPL +IS I + +G + +HDKW C + A + ++ +K F
Sbjct: 526 GYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHF 585
Query: 832 S 832
S
Sbjct: 586 S 586
>ZFIN|ZDB-GENE-060503-819 [details] [associations]
symbol:olfch1 "olfactory receptor C family, h1"
species:7955 "Danio rerio" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000337 InterPro:IPR004073
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR01535
PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
ZFIN:ZDB-GENE-060503-819 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
InterPro:IPR001828 HOGENOM:HOG000232092 HOVERGEN:HBG052876
GeneTree:ENSGT00690000101821 eggNOG:KOG1056 EMBL:AL844192
IPI:IPI00507021 RefSeq:NP_001103760.1 UniGene:Dr.143186
Ensembl:ENSDART00000104792 GeneID:100004933 KEGG:dre:100004933
OMA:ESWITSS OrthoDB:EOG4J117R NextBio:20786439 Uniprot:A8DZ72
Length = 853
Score = 219 (82.2 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 61/230 (26%), Positives = 112/230 (48%)
Query: 55 AVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTV-------------AII 101
A++++NS + L + Q+ D S ++ ++ L+ GQ + AII
Sbjct: 83 AIEEINSKRSLLPNISIGYQIFDSCGSTLASMRSSMALINGQELTAEHTCSGKPAVKAII 142
Query: 102 GPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSL-QFPYFVRTTQSDQYQMAAIAEIVD 160
G ++ T+ V+S A +P++S AT LSS QFP F RT SD YQ A+A++V
Sbjct: 143 GESESSTTIVLSRAAGPFNIPVISHFATCACLSSRKQFPSFFRTIPSDYYQSRALAQLVK 202
Query: 161 HYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVALT 220
H+GW + A+ D+D+G NG+A + + I + +S ++D+I ++ +
Sbjct: 203 HFGWTWIGAVRSDNDYGNNGMATFVEVAEKEGVCIEYSEAISRTNSKDKIAKVVEVIKKG 262
Query: 221 ESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYV----WIATSWLSTALDTN 266
+++++ V+ ++G +V WI +S+L+T N
Sbjct: 263 TAKVLMAFLAQGEMDVLLEELIRQNVVGLQWVGSESWITSSYLATERTLN 312
Score = 41 (19.5 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 21/88 (23%), Positives = 36/88 (40%)
Query: 375 SILQANMTGTAGPA-RFNSHGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPETLYS 433
S+ N T +G F+ +GD + YE++N W +G + T+
Sbjct: 442 SLQNVNFTMDSGETVYFDKNGDPM-AKYELVN-----------WQK-NGAGETKFITVGQ 488
Query: 434 KPPNRSSSNQRL---YSVIWPGQTTQKP 458
+ SS Q + + +IW G + KP
Sbjct: 489 YDASLSSEQQFVINSFDIIWAGDSPTKP 516
>UNIPROTKB|H0Y2V8 [details] [associations]
symbol:GRIN2C "Glutamate receptor, ionotropic, N-methyl
D-aspartate 2C, isoform CRA_a" species:9606 "Homo sapiens"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:CH471099 EMBL:AC068874
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 UniGene:Hs.436980
HGNC:HGNC:4587 HOVERGEN:HBG052636 HOGENOM:HOG000231061
Ensembl:ENST00000347612 UCSC:uc002jlu.1 Uniprot:H0Y2V8
Length = 873
Score = 126 (49.4 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 59/248 (23%), Positives = 106/248 (42%)
Query: 380 NMTGTAGPARFNSHGDLINPAYEIINVIGTG-YRRIGYWSNYSGLSVVRPETLYSKPPNR 438
N+T F+ G L+ P +I + + +G W + G+ ++ Y P
Sbjct: 337 NVTWEGRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEH--GVLYMK----YPVWPRY 390
Query: 439 SSSNQRLYSVIWPGQTTQKPRGWVF-----PNNGRHLRIGVP-NRVSFREFVSVKGSEMT 492
S+S Q + T + R +V P G + VP R S F S + T
Sbjct: 391 SASLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYT 450
Query: 493 S----GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVY----DAAVG 544
GFCID+ ++ ++ Y L +G + + + VY D A+G
Sbjct: 451 KLCCKGFCIDILKKLARVVKFS--YDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIG 508
Query: 545 DIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGA 604
+ I R+++ DF+ P++E+G+ V+ + AFL P++P +W + + L V A
Sbjct: 509 SLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVA 568
Query: 605 V-VWILEH 611
+ V++ E+
Sbjct: 569 ITVFMFEY 576
Score = 97 (39.2 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 42/180 (23%), Positives = 76/180 (42%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVNSFARNYLVDELNIDE 717
+SYTA+L + + ++ + G+ + YP G N +
Sbjct: 641 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMH 700
Query: 718 SRLVPLN--SPEEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFTK 771
+ +V N S E+ +LK G + AAV++ A + C+ +G +VF
Sbjct: 701 THMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKD----EGCKLVTIGSGKVFAT 756
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDRL 826
G+G A +DS I A+L+ +G+ Q++ WL C ++ +KLD+D +
Sbjct: 757 TGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWL-SGICQNEKNEVMSSKLDIDNM 815
Score = 86 (35.3 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 46/220 (20%), Positives = 92/220 (41%)
Query: 105 DAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFP--YFVRTTQSDQYQMAAIAEIVDHY 162
+AV + ++ ++++ VP+LS S + + + P F++ S + Q+ + ++++ Y
Sbjct: 102 EAV-AQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 163 GWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATE------DEITDLLVK 216
W A+ + H + + G A +S++ L V E T L++
Sbjct: 161 DW-SAFAV-ITSLHPGHALFLEGVRAVADASHVSWRL-LDVVTLELGPGGPRARTQRLLR 217
Query: 217 VALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTN-SPFPSDVMD 275
++ + V + V+F A G++G G+VW+ + + D + FP ++
Sbjct: 218 QL--DAPVFVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPNLALGSTDAPPATFPVGLIS 275
Query: 276 DIQGV--LTLRTYTPDSV--LKRKFISRWRNLTDAKTPNG 311
+ L+LR D V L S WR P G
Sbjct: 276 VVTESWRLSLRQKVRDGVAILALGAHSYWRQHGTLPAPAG 315
>UNIPROTKB|J9P9T9 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 EMBL:AAEX03006305
EMBL:AAEX03006306 Ensembl:ENSCAFT00000044880 Uniprot:J9P9T9
Length = 1180
Score = 125 (49.1 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVY----DAAVGDIAII 549
GFCID+ ++ ++ Y L +G + + + VY D A+G + I
Sbjct: 455 GFCIDILKKLAKVVKFS--YDLYLVTNGKHGKRVRGVWNGMIGEVYYQRADMAIGSLTIN 512
Query: 550 TNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWI 608
R+++ DF+ P++E+G+ V+ + AFL P++P +W + + L V A+ V++
Sbjct: 513 EERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPSVWVMMFVMCLTVVAITVFM 572
Query: 609 LEH 611
E+
Sbjct: 573 FEY 575
Score = 97 (39.2 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 42/180 (23%), Positives = 76/180 (42%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVNSFARNYLVDELNIDE 717
+SYTA+L + + ++ + G+ + YP G N +
Sbjct: 640 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMH 699
Query: 718 SRLVPLN--SPEEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFTK 771
+ +V N S E+ +LK G + AAV++ A + C+ +G +VF
Sbjct: 700 THMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKD----EGCKLVTIGSGKVFAT 755
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDRL 826
G+G A +DS I A+L+ +G+ Q++ WL C ++ +KLD+D +
Sbjct: 756 TGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWL-SGICQNEKNEVMSSKLDIDNM 814
Score = 91 (37.1 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 41/197 (20%), Positives = 90/197 (45%)
Query: 105 DAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFP--YFVRTTQSDQYQMAAIAEIVDHY 162
+AV + ++ ++++ VP+LS S + + + P F++ S + Q+ + ++++ Y
Sbjct: 102 EAV-AQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 163 GWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA--PLSVE---ATEDEITDLLVKV 217
W A+ + H + + G AA +S++ L++E + T L++
Sbjct: 161 DW-SAFAV-ITSLHPGHALFLEGVRAAADASYLSWRLLDVLTLELGPGGQRAHTQRLLRQ 218
Query: 218 ALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTN-SPFPSDVMDD 276
++ ++V + V+F A G++G G+VW+ S + D + FP ++
Sbjct: 219 L--DAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPSLALGSTDAPPAAFPVGLISV 276
Query: 277 IQGV--LTLRTYTPDSV 291
+ L+LR D V
Sbjct: 277 VTESWRLSLRQKVRDGV 293
>UNIPROTKB|F1NAD5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0043523 "regulation
of neuron apoptotic process" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0043197 GO:GO:0035235 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:CSFYTVG
EMBL:AADN02016072 EMBL:AADN02016073 EMBL:AADN02016074
EMBL:AADN02016075 EMBL:AADN02016076 EMBL:AADN02016077
EMBL:AADN02016078 EMBL:AADN02016079 IPI:IPI00591618
Ensembl:ENSGALT00000016932 Uniprot:F1NAD5
Length = 908
Score = 208 (78.3 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 165/750 (22%), Positives = 289/750 (38%)
Query: 150 YQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDE 209
Y I ++ Y W++ I Y D+D+ GI D ++ + ++ + VE ++
Sbjct: 52 YLNDVILRVITEYAWQKFIIFY-DNDYDIRGIQEFLDKVSQQGMDVALQ---KVENNINK 107
Query: 210 -ITDLLVKVALTESRIIVVHTHYNRGPVVFH---VAQYLG-MLGTGYVWIATSWLSTALD 264
IT L + + E + R +V + +L ++ T V W+ +
Sbjct: 108 MITGLFATMRIEE--LNRYRDTLRRAILVMNPLTAKSFLTEVVETNLVAFDCHWIIINEE 165
Query: 265 TNSPFPSDVMDDIQGVLTL--RTY-TPDSVLKRKFISRWR---NLTDAKTPNGYIGLNAY 318
+ +++ G LT+ +T+ P ++ +R F R +L D K P +
Sbjct: 166 ISDLDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSSLCDPKDPFSQ-SMEIS 224
Query: 319 GFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQ 378
Y YDTV LLA N+F K+ + + + L+ I R +S + + GG + ++I +
Sbjct: 225 NLYIYDTVLLLA---NAFHKKLEDRKWHSMASLTCI----RKNS-KPWQGGRSMLETIKK 276
Query: 379 ANMTGTAGPARFNSHGDLINPAYEIINV-----IGTGYRRIGYWSNYSGLSVVRPETLYS 433
+ G G F +G N +EI+ +G G R++G W+ +GL+ S
Sbjct: 277 GGVNGLTGELEFAENGGNPNVHFEILGTNYGEDLGRGIRKLGCWNPITGLNG-------S 329
Query: 434 KPPNRSSSNQRLYSVIWPGQTT-QKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMT 492
+ +N R V+ T ++P V N +G P + ++
Sbjct: 330 LTDRKLENNMR--GVVLRVVTVLEEPFVMVSENV-----LGKPKKYQGFSIDVLEALANY 382
Query: 493 SGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELV-RLITAGVYDAAVGDIA--II 549
GF +++ A + Y P DG N ELV + G+ + ++
Sbjct: 383 LGFKYEIYVAPDH--KYGSPQD-----DGSWNGLIGELVFKRADIGISALTITPDRENVV 435
Query: 550 TNRTKMADFTQPYI----ESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV 605
T+ D++ + E + + A + D + WA ++ G + L V +
Sbjct: 436 DFTTRYMDYSVGVLLRKAEKTVDMFACLAPFDLSLWACIA-------GTVLLVGLLVYLL 488
Query: 606 VWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALG-RXXXXXXXXXXXXXN 664
W+ RL + + WF + + E + L R
Sbjct: 489 NWLNPPRL--QMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRLMMGAWWLFALIVI 546
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-------YQ------VNSFARNYLV 710
SSYTA+L + LT+ ++ + I+ + L R ++ P G Y+ +N F R+ +
Sbjct: 547 SSYTANLAAFLTITRIENSIQSLQDLSRQTDIPYGTVLDSAVYEHVRVKGMNPFERDSMY 606
Query: 711 DEL--NIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYAELFLSTR--CEFSIVG 766
++ I+ S N E A K K G A V D A E C F VG
Sbjct: 607 SQMWRMINRSNGSENNVLESTAGIQKV---KHGNYAFVWDAAVLEYVAINDGDCSFYTVG 663
Query: 767 QVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSA-C---SSQGAKLD 822
G+G A SP S IL+L +NGD+ + KW ++ C SS K
Sbjct: 664 NTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDFYSSVDTKQK 723
Query: 823 VDRLQLKSFSXXXXXXXXXXXXXXFIYLMQ 852
L +KSF+ FI +++
Sbjct: 724 GGALDIKSFAGVFCILAAGIVLSCFIAMLE 753
>UNIPROTKB|E2RG96 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTWRRIS
EMBL:AAEX03006305 EMBL:AAEX03006306 Ensembl:ENSCAFT00000007441
Uniprot:E2RG96
Length = 1220
Score = 125 (49.1 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVY----DAAVGDIAII 549
GFCID+ ++ ++ Y L +G + + + VY D A+G + I
Sbjct: 456 GFCIDILKKLAKVVKFS--YDLYLVTNGKHGKRVRGVWNGMIGEVYYQRADMAIGSLTIN 513
Query: 550 TNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWI 608
R+++ DF+ P++E+G+ V+ + AFL P++P +W + + L V A+ V++
Sbjct: 514 EERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPSVWVMMFVMCLTVVAITVFM 573
Query: 609 LEH 611
E+
Sbjct: 574 FEY 576
Score = 97 (39.2 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 42/180 (23%), Positives = 76/180 (42%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVNSFARNYLVDELNIDE 717
+SYTA+L + + ++ + G+ + YP G N +
Sbjct: 641 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMH 700
Query: 718 SRLVPLN--SPEEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFTK 771
+ +V N S E+ +LK G + AAV++ A + C+ +G +VF
Sbjct: 701 THMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKD----EGCKLVTIGSGKVFAT 756
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDRL 826
G+G A +DS I A+L+ +G+ Q++ WL C ++ +KLD+D +
Sbjct: 757 TGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWL-SGICQNEKNEVMSSKLDIDNM 815
Score = 91 (37.1 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 41/197 (20%), Positives = 90/197 (45%)
Query: 105 DAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFP--YFVRTTQSDQYQMAAIAEIVDHY 162
+AV + ++ ++++ VP+LS S + + + P F++ S + Q+ + ++++ Y
Sbjct: 102 EAV-AQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 163 GWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA--PLSVE---ATEDEITDLLVKV 217
W A+ + H + + G AA +S++ L++E + T L++
Sbjct: 161 DW-SAFAV-ITSLHPGHALFLEGVRAAADASYLSWRLLDVLTLELGPGGQRAHTQRLLRQ 218
Query: 218 ALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTN-SPFPSDVMDD 276
++ ++V + V+F A G++G G+VW+ S + D + FP ++
Sbjct: 219 L--DAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPSLALGSTDAPPAAFPVGLISV 276
Query: 277 IQGV--LTLRTYTPDSV 291
+ L+LR D V
Sbjct: 277 VTESWRLSLRQKVRDGV 293
>ZFIN|ZDB-GENE-061207-27 [details] [associations]
symbol:grin2bb "glutamate receptor, ionotropic,
N-methyl D-aspartate 2B, genome duplicate b" species:7955 "Danio
rerio" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-061207-27 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX537268 EMBL:BX901927
EMBL:BX901961 IPI:IPI00508048 ProteinModelPortal:F1RDX3
Ensembl:ENSDART00000092613 Bgee:F1RDX3 Uniprot:F1RDX3
Length = 1770
Score = 136 (52.9 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 63/245 (25%), Positives = 103/245 (42%)
Query: 380 NMTGTAGPARFNSHGDLINPAYEIINVIGTG-YRRIGYWSNYSGLSV---VRPE-TLYSK 434
N+T F+ G ++P II + Y R+G W N S L++ V P LYS
Sbjct: 418 NVTFEGRNLSFSEDGFQMHPKLVIILLNKERQYERVGKWENGS-LAMKYHVWPRFELYSD 476
Query: 435 PPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNR--VSFREFVSVKG---S 489
R + S++ + V P +G +R VP R + + G
Sbjct: 477 AEEREDDH---LSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLQNLTGDSGIYIK 533
Query: 490 EMTSGFCIDVFTAAINLLPYAVPYKLIPFGD-GHN-NPSCTELVRLITAGVYDAAVGDIA 547
GFCID+ + + L+ G G N + +V + AVG +
Sbjct: 534 RCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLT 593
Query: 548 IITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-V 606
I R+++ DF+ P+IE+G+ V+ + AFL PF+ +W + + L V AV V
Sbjct: 594 INEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAV 653
Query: 607 WILEH 611
++ E+
Sbjct: 654 FVFEY 658
Score = 95 (38.5 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 35/179 (19%), Positives = 79/179 (44%)
Query: 104 QDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFPY--FVRTTQSDQYQMAAIAEIVDH 161
Q+A+ + ++ ++ + +P+L + + + + F + S + Q + + I++
Sbjct: 179 QEAI-AQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIMEE 237
Query: 162 YGWR--EVIAIYVDDDHGR-NGIAALGD-TLAAKRCRISFKAPLSVEATEDEITDLLVKV 217
Y W ++ Y N I + D + +SV+ + +I + + K+
Sbjct: 238 YDWYIFSIVTTYYPGHQDFVNRIRSTVDNSFVGWELEEVLLLDMSVDDGDSKIQNQMKKL 297
Query: 218 ALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSP--FPSDVM 274
+S +I+++ +F VA +G+ G GY WI S ++ D N P FP+ ++
Sbjct: 298 ---QSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWIVPSLVAGDTD-NVPNVFPTGLI 352
Score = 84 (34.6 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 40/183 (21%), Positives = 80/183 (43%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL-NIDESRLVPL 723
+SYTA+L + + ++ + G+ + +P N F+ + + N R +
Sbjct: 723 ASYTANLAAFMIQEEYVDQVTGLSD-KKFQHP-----NDFSPPFRFGTVPNGSTERNIRN 776
Query: 724 NSPEEYA-------KALKDGPHK---GGVAAVVDDRAYAELFLSTR---CEFSIVGQ--V 768
N E ++ K + + H G + A + D A +++ R C+ +G +
Sbjct: 777 NYKEMHSYMTSFHQKNVNEALHSLKSGKLDAFIYDAAVLN-YMAGRDEGCKLVTIGSGYI 835
Query: 769 FTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDV 823
F G+G A +DS + AIL+L +G+++ + WL C ++ ++LDV
Sbjct: 836 FATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMSSQLDV 894
Query: 824 DRL 826
D +
Sbjct: 895 DNM 897
Score = 38 (18.4 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 725 SPEEYAKALKDGPHKGG 741
SP Y + L DG GG
Sbjct: 660 SPVGYNRCLADGREPGG 676
>RGD|2739 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, N-methyl D-aspartate
2C" species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006812 "cation
transport" evidence=ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0009611 "response to wounding"
evidence=IEA;ISO] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0033058 "directional locomotion" evidence=IEA;ISO]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO;IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA;ISO]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0030288 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905 HOVERGEN:HBG052636
KO:K05211 OrthoDB:EOG42RD6M EMBL:M91563 EMBL:D13212 IPI:IPI00326555
RefSeq:NP_036707.3 UniGene:Rn.9709 ProteinModelPortal:Q00961
SMR:Q00961 IntAct:Q00961 MINT:MINT-87425 STRING:Q00961
PhosphoSite:Q00961 PRIDE:Q00961 Ensembl:ENSRNOT00000004477
GeneID:24411 KEGG:rno:24411 InParanoid:Q00961 BindingDB:Q00961
ChEMBL:CHEMBL401 NextBio:603235 ArrayExpress:Q00961
Genevestigator:Q00961 GermOnline:ENSRNOG00000003280 Uniprot:Q00961
Length = 1237
Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVY----DAAVGDIAII 549
GFCID+ ++ ++ Y L +G + + + VY D A+G + I
Sbjct: 456 GFCIDILKKLAKVVKFS--YDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTIN 513
Query: 550 TNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWI 608
R+++ DF+ P++E+G+ V+ + AFL P++P +W + + L V A+ V++
Sbjct: 514 EERSEIIDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFM 573
Query: 609 LEH 611
E+
Sbjct: 574 FEY 576
Score = 101 (40.6 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 43/180 (23%), Positives = 77/180 (42%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVNSFARNYLVDELNIDE 717
+SYTA+L + + ++ + G+ + YP G N +
Sbjct: 641 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMH 700
Query: 718 SRLVPLN--SPEEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFTK 771
+ +V N S E+ +LK G + AAV++ A + C+ +G +VF
Sbjct: 701 THMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKD----EGCKLVTIGSGKVFAT 756
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDRL 826
G+G A +DS I A+L+L +G+ Q++ WL C ++ +KLD+D +
Sbjct: 757 TGYGIAMQKDSHWKRAIDLALLQLLGDGETQKLETVWL-SGICQNEKNEVMSSKLDIDNM 815
Score = 85 (35.0 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 41/196 (20%), Positives = 84/196 (42%)
Query: 105 DAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFP--YFVRTTQSDQYQMAAIAEIVDHY 162
+AV + ++ V+++ VP+LS S + + + P F++ S + Q+ + ++++ Y
Sbjct: 102 EAV-AQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 163 GWREVIAIY-VDDDHGR--NGIAALGD-TLAAKRCRISFKAPLSVEATEDEITDLLVKVA 218
W I + H G+ A+ D + + R L LL +V
Sbjct: 161 DWSAFAVITSLHPGHALFLEGVRAVADASYLSWRLLDVLTLELGPGGPRARTQRLLRQV- 219
Query: 219 LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTN-SPFPSDVMDDI 277
++ ++V + V+F A G++G G+VW+ + + D + FP ++ +
Sbjct: 220 --DAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPNLALGSTDAPPAAFPVGLISVV 277
Query: 278 QGV--LTLRTYTPDSV 291
L+LR D V
Sbjct: 278 TESWRLSLRQKVRDGV 293
>UNIPROTKB|Q14957 [details] [associations]
symbol:GRIN2C "Glutamate receptor ionotropic, NMDA 2C"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0009611
"response to wounding" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005737 GO:GO:0014069
GO:GO:0008104 GO:GO:0005887 GO:GO:0009611 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0050885 GO:GO:0060079
DrugBank:DB00142 GO:GO:0030288 GO:GO:0005261 EMBL:AC068874
GO:GO:0042177 DrugBank:DB00145 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565 EMBL:L76224
EMBL:BC140801 IPI:IPI00215887 RefSeq:NP_000826.2 UniGene:Hs.436980
ProteinModelPortal:Q14957 SMR:Q14957 MINT:MINT-1776011
STRING:Q14957 TCDB:1.A.10.1.3 PhosphoSite:Q14957 DMDM:215274091
PaxDb:Q14957 PRIDE:Q14957 Ensembl:ENST00000293190 GeneID:2905
KEGG:hsa:2905 UCSC:uc002jlt.1 CTD:2905 GeneCards:GC17M072854
H-InvDB:HIX0039170 HGNC:HGNC:4587 HPA:HPA041666 MIM:138254
neXtProt:NX_Q14957 PharmGKB:PA28981 HOVERGEN:HBG052636
InParanoid:Q14957 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
PhylomeDB:Q14957 BindingDB:Q14957 ChEMBL:CHEMBL4109 GenomeRNAi:2905
NextBio:11503 ArrayExpress:Q14957 Bgee:Q14957 CleanEx:HS_GRIN2C
Genevestigator:Q14957 GermOnline:ENSG00000161509 Uniprot:Q14957
Length = 1233
Score = 126 (49.4 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 59/248 (23%), Positives = 106/248 (42%)
Query: 380 NMTGTAGPARFNSHGDLINPAYEIINVIGTG-YRRIGYWSNYSGLSVVRPETLYSKPPNR 438
N+T F+ G L+ P +I + + +G W + G+ ++ Y P
Sbjct: 337 NVTWEGRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEH--GVLYMK----YPVWPRY 390
Query: 439 SSSNQRLYSVIWPGQTTQKPRGWVF-----PNNGRHLRIGVP-NRVSFREFVSVKGSEMT 492
S+S Q + T + R +V P G + VP R S F S + T
Sbjct: 391 SASLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYT 450
Query: 493 S----GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVY----DAAVG 544
GFCID+ ++ ++ Y L +G + + + VY D A+G
Sbjct: 451 KLCCKGFCIDILKKLARVVKFS--YDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIG 508
Query: 545 DIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGA 604
+ I R+++ DF+ P++E+G+ V+ + AFL P++P +W + + L V A
Sbjct: 509 SLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVA 568
Query: 605 V-VWILEH 611
+ V++ E+
Sbjct: 569 ITVFMFEY 576
Score = 97 (39.2 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 42/180 (23%), Positives = 76/180 (42%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVNSFARNYLVDELNIDE 717
+SYTA+L + + ++ + G+ + YP G N +
Sbjct: 641 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMH 700
Query: 718 SRLVPLN--SPEEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFTK 771
+ +V N S E+ +LK G + AAV++ A + C+ +G +VF
Sbjct: 701 THMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKD----EGCKLVTIGSGKVFAT 756
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDRL 826
G+G A +DS I A+L+ +G+ Q++ WL C ++ +KLD+D +
Sbjct: 757 TGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWL-SGICQNEKNEVMSSKLDIDNM 815
Score = 86 (35.3 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 46/220 (20%), Positives = 92/220 (41%)
Query: 105 DAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFP--YFVRTTQSDQYQMAAIAEIVDHY 162
+AV + ++ ++++ VP+LS S + + + P F++ S + Q+ + ++++ Y
Sbjct: 102 EAV-AQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 163 GWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATE------DEITDLLVK 216
W A+ + H + + G A +S++ L V E T L++
Sbjct: 161 DW-SAFAV-ITSLHPGHALFLEGVRAVADASHVSWRL-LDVVTLELGPGGPRARTQRLLR 217
Query: 217 VALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTN-SPFPSDVMD 275
++ + V + V+F A G++G G+VW+ + + D + FP ++
Sbjct: 218 QL--DAPVFVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPNLALGSTDAPPATFPVGLIS 275
Query: 276 DIQGV--LTLRTYTPDSV--LKRKFISRWRNLTDAKTPNG 311
+ L+LR D V L S WR P G
Sbjct: 276 VVTESWRLSLRQKVRDGVAILALGAHSYWRQHGTLPAPAG 315
>ZFIN|ZDB-GENE-020125-4 [details] [associations]
symbol:gria2b "glutamate receptor, ionotropic, AMPA
2b" species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-4 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HSSP:P19491 EMBL:AF361751 IPI:IPI00513119 UniGene:Dr.81161
ProteinModelPortal:Q90XP6 SMR:Q90XP6 InParanoid:Q90XP6
ArrayExpress:Q90XP6 Uniprot:Q90XP6
Length = 897
Score = 136 (52.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 52/223 (23%), Positives = 91/223 (40%)
Query: 489 SEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTE------LVRLITAGVYDAA 542
+E G+C+D+ + K++ GDG E +V + G D A
Sbjct: 436 NERYEGYCVDLAAEIAKHCGFKYQLKIV--GDGKYGARDAETKIWNGMVGELVYGKADIA 493
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
V + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 494 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 553
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGPPKRQVVTIF---WFSFSTMFFAHKEKTVSAL 648
V+ + FL W E + + + IF WFS + + +L
Sbjct: 554 VSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSL 613
Query: 649 -GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 614 PGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 656
Score = 133 (51.9 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 54/242 (22%), Positives = 97/242 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGPPKRQVVTIF---WFSFSTMFFAHKEKTVSA 647
GV+ + FL W E + + + IF WFS + + +
Sbjct: 553 GVSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRS 612
Query: 648 L-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNSFA 705
L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 613 LPGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGST 672
Query: 706 RNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELFLS 757
+ + ++ + + + P + K +G KG A +++ +
Sbjct: 673 KEFFRRSKIALFDKMWTYMKGAEPSVFVKTTAEGVMRVRKSKGKYAYLLESTMNEYIEQR 732
Query: 758 TRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSACSS 816
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C +
Sbjct: 733 KPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGT 792
Query: 817 QG 818
G
Sbjct: 793 GG 794
Score = 121 (47.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 52/277 (18%), Positives = 109/277 (39%)
Query: 155 IAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISF--KAPLSVEATEDEITD 212
+ ++++Y W + +Y D D G + + DT A K+ +++ + E ++
Sbjct: 135 LLSLIEYYKWDKFAYLY-DSDRGLTTLQVVLDTAAEKKWQVTAINVGNMKDERKDEAYRS 193
Query: 213 LLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSD 272
L + + R +++ ++ + +G GY +I + L +D + S
Sbjct: 194 LFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIAN-LGF-VDGDL---SK 248
Query: 273 VMDDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARA 332
+ V + D L KF RW L + + P + YD V ++ A
Sbjct: 249 IQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSKIRYTSALTYDAVQVMTEA 308
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNS 392
KQ + S+ + D L ++ G + R ++ Q + G G +F+
Sbjct: 309 FRYLHKQ--RIDISRRANNGDC---LANPAVPWAQGVEIER-ALKQVRVDGLTGNIQFDQ 362
Query: 393 HGDLINPAYEIINVIGTGYRRIGYWSNYSGLSVVRPE 429
+G +N ++ + G +IGYW+ + V + +
Sbjct: 363 YGKRVNYTVHVMELKSNGAVKIGYWNEVDKMVVTKSD 399
Score = 47 (21.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 17/77 (22%), Positives = 36/77 (46%)
Query: 141 FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRI 195
F+ + + Y + AEI H G++ + I D +G R+ + + + + + I
Sbjct: 433 FMDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGMVGELVYGKADI 492
Query: 196 SFKAPLSVEATEDEITD 212
+ APL++ +E+ D
Sbjct: 493 AV-APLTITLVREEVID 508
>MGI|MGI:95821 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, NMDA2B (epsilon
2)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001964 "startle response" evidence=IGI;IMP]
[GO:0001967 "suckling behavior" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IGI;IMP] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005149 "interleukin-1
receptor binding" evidence=ISO] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity" evidence=IGI]
[GO:0005262 "calcium channel activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IGI] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007423
"sensory organ development" evidence=IMP] [GO:0007611 "learning or
memory" evidence=TAS] [GO:0007612 "learning" evidence=IMP;IDA]
[GO:0007613 "memory" evidence=ISO;IMP;IDA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008306 "associative learning"
evidence=ISO] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014049 "positive
regulation of glutamate secretion" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030018 "Z disc" evidence=ISO] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0031749 "D2 dopamine receptor
binding" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IMP] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IMP] [GO:0035255 "ionotropic
glutamate receptor binding" evidence=ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0042596 "fear
response" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043083 "synaptic cleft" evidence=ISO] [GO:0043113 "receptor
clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043408 "regulation of MAPK cascade" evidence=ISO] [GO:0045202
"synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0045471 "response to ethanol" evidence=ISO;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048167 "regulation
of synaptic plasticity" evidence=IMP] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=TAS] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=ISO]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050806 "positive regulation
of synaptic transmission" evidence=ISO] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IGI;IMP] [GO:0070588
"calcium ion transmembrane transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95821
GO:GO:0014069 GO:GO:0009986 GO:GO:0007423 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0007612 GO:GO:0008021 GO:GO:0048266
GO:GO:0050966 GO:GO:0008270 GO:GO:0001701 GO:GO:0001967
GO:GO:0060079 GO:GO:0042734 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0048168 GO:GO:0001964 GO:GO:0017146
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 CTD:2904
KO:K05210 OrthoDB:EOG4Z8XVM EMBL:D10651 EMBL:AK002963
IPI:IPI00321320 PIR:I49704 RefSeq:NP_032197.3 UniGene:Mm.436649
ProteinModelPortal:Q01097 SMR:Q01097 DIP:DIP-31568N IntAct:Q01097
MINT:MINT-135847 STRING:Q01097 PhosphoSite:Q01097 PaxDb:Q01097
PRIDE:Q01097 GeneID:14812 KEGG:mmu:14812 UCSC:uc009elq.1
InParanoid:Q01097 BindingDB:Q01097 ChEMBL:CHEMBL3442 NextBio:287003
Genevestigator:Q01097 GermOnline:ENSMUSG00000030209 Uniprot:Q01097
Length = 1482
Score = 162 (62.1 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 80/369 (21%), Positives = 151/369 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GHN-NPSCTELV-RLITAGVYDAAVGDIAIIT 550
GFCID+ + + L+ G G N + ++ ++ Y AVG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAY-MAVGSLTINE 517
Query: 551 NRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWIL 609
R+++ DF+ P+IE+G+ V+ + AFL PF+ +W + + L V AV V++
Sbjct: 518 ERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 610 EH-------RLNDEFRGP--PKRQVVTIFWFSFSTMF--FAHKEKTVSALGRXXXXXXXX 658
E+ R + R P P + W + +F + +
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF 637
Query: 659 XXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL-NIDE 717
+SYTA+L + + ++ + G+ + P N F+ + + N
Sbjct: 638 FAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQR-P-----NDFSPPFRFGTVPNGST 691
Query: 718 SRLVPLNSPEEYA-------KALKDGP---HKGGVAAVVDDRAYAELFLSTR---CEFSI 764
R + N E +A + + D G + A + D A +++ R C+
Sbjct: 692 ERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLN-YMAGRDEGCKLVT 750
Query: 765 VG--QVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ----- 817
+G +VF G+G A +DS + AIL+L +G+++ + WL C ++
Sbjct: 751 IGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVM 809
Query: 818 GAKLDVDRL 826
++LD+D +
Sbjct: 810 SSQLDIDNM 818
Score = 99 (39.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 53/267 (19%), Positives = 108/267 (40%)
Query: 93 MEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSL--QFPYFVRTTQSDQY 150
++G +A Q+A+ + ++ ++ + P+L + + + F + S +
Sbjct: 94 IQGVVLADDTDQEAI-AQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSIEQ 152
Query: 151 QMAAIAEIVDHYGWR--EVIAIYVD--DDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
Q + + I++ Y W ++ Y D + + ++ +S++
Sbjct: 153 QASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDG 212
Query: 207 EDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT- 265
+ +I + L K+ +S II+++ +F VA +G+ G GY WI S ++ DT
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTV 269
Query: 266 NSPFPSDVM----DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFY 321
S FP+ ++ D+ L R +++ + P N +
Sbjct: 270 PSEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSC-YNTHEKR 328
Query: 322 AYDTVWLLARAINSFFKQGGNLSFSKD 348
Y + L IN F +G NLSFS+D
Sbjct: 329 IYQSNMLNRYLINVTF-EGRNLSFSED 354
>ZFIN|ZDB-GENE-041008-124 [details] [associations]
symbol:grin2da "glutamate receptor, ionotropic,
N-methyl D-aspartate 2D, a" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-041008-124
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 GeneTree:ENSGT00540000070221
OrthoDB:EOG42RD6M EMBL:BX950852 IPI:IPI00650738
ProteinModelPortal:I3NI77 Ensembl:ENSDART00000128837 Bgee:I3NI77
Uniprot:I3NI77
Length = 1916
Score = 195 (73.7 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 64/244 (26%), Positives = 115/244 (47%)
Query: 379 ANMTGTAGPARFNSHGDLINPAYEIIN-VIGTGYRRIGYWSNYSGLSVVR--PETLYSK- 434
+N+T + FN+ G L NP ++I+ G G+ +G+W N G+ +R P + Y
Sbjct: 388 SNITLSGRDYSFNNDGYLANPLLDVISYTAGRGWEEVGWWEN--GVLRLRYPPWSRYGPF 445
Query: 435 -PPNRSSSNQRLYSVIWPGQTTQKPRGWVFPNNGRHLRIGVPNRVSFREFVSVKGSEMTS 493
P S + R+ ++ +P P G +R VP R+ + V+G +
Sbjct: 446 LKPLDDSQHLRVVTLEERPFVIVEPAD---PGTGSCIRDSVPCRLPLNNSMVVEGIQSMK 502
Query: 494 ----GFCIDVFTAAINLLPYAVPYKLIPFG-DGHN-NPSCTELVRLITAGVYDAAVGDIA 547
GFCIDV ++ + L+ G G N + +V + + D A+G +
Sbjct: 503 HCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGQWNGMVGEVVSKRADMAIGSLT 562
Query: 548 IITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-V 606
I R+++ +F+ P++E+G+ V+ + AFL P++P +W + + L+V AV V
Sbjct: 563 INEERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLSVVAVTV 622
Query: 607 WILE 610
+I E
Sbjct: 623 FIFE 626
Score = 69 (29.3 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 41/181 (22%), Positives = 78/181 (43%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVN-SFARNYLVDELNID 716
+SYTA+L + + ++ + G+ + + YP G N S N + N+
Sbjct: 692 ASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEENIRSNYPNMH 751
Query: 717 ESRLVPLNSP--EEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFT 770
+ +V N E+ + LK G + AAV++ A + C+ +G +VF
Sbjct: 752 QY-MVRNNQRGVEDAIENLKTGKLDAFIYDAAVLNYMARKD----EGCKVMTIGSGKVFA 806
Query: 771 KNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDR 825
G+G A ++S + A+L+L + ++ + WL C + +KLD+D
Sbjct: 807 TTGYGVALHKNSRWKRPLDLALLQLVGDDEIDMLERLWL-SGICHNDKIEVMSSKLDIDN 865
Query: 826 L 826
+
Sbjct: 866 M 866
Score = 48 (22.0 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 888 EDEVKSRSKRRHVERTSYRSEDEMSSCNSNRKHIELSS 925
+DE SR K RH +R S +S S SN KH S+
Sbjct: 1462 DDEEGSRGKERH-QR-SPKSHRH-SRPRSNNKHFSASN 1496
Score = 47 (21.6 bits), Expect = 3.7e-10, Sum P(4) = 3.7e-10
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 664 NSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLV 721
+SS ++S +S ++ + +SP S ++ V +Y DEL +ES L+
Sbjct: 1218 SSSTSSSSSSSESISRSNSPSSSSSYTSSQSFRYRADVRDLYEDYDTDELT-EESSLL 1274
Score = 46 (21.3 bits), Expect = 2.5e-12, Sum P(4) = 2.5e-12
Identities = 20/119 (16%), Positives = 48/119 (40%)
Query: 141 FVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDHGRNGIAALGDTLA-AKRCRISFKA 199
+++ + S Q+ I E+++ + W ++ HG A+ + + K+
Sbjct: 192 YLQFSCSTDLQLEVIFEVLEEFDWT-AFSVVTTRHHGYEDFLAMVEGMIDGSFIGWERKS 250
Query: 200 PLSVEATEDE---ITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIA 255
+ + T+D T L+K E+++ +++ +F A G ++W A
Sbjct: 251 VVMLNLTDDPGGARTRRLLKE--NEAQVRLLYCSQEEAEQIFKAAWASGQATPSHMWFA 307
Score = 43 (20.2 bits), Expect = 7.8e-12, Sum P(4) = 7.8e-12
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 868 NG-GSSRSARLQTFLSFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCNSNR 918
NG G S +F + +E+EDE +S +R E R E S R
Sbjct: 1552 NGRGKPCSREGLSFHEWDSEEEDE-ESEMERNRAEEQGRRRESRGMDSESER 1602
>ZFIN|ZDB-GENE-050522-281 [details] [associations]
symbol:olfcw1 "olfactory receptor C family, w1"
species:7955 "Danio rerio" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000337 InterPro:IPR004073
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR01535
PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
ZFIN:ZDB-GENE-050522-281 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
InterPro:IPR001828 GeneTree:ENSGT00690000101821 EMBL:BX649622
IPI:IPI00500891 ProteinModelPortal:F1QLP7
Ensembl:ENSDART00000139869 Uniprot:F1QLP7
Length = 866
Score = 203 (76.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 54/176 (30%), Positives = 90/176 (51%)
Query: 100 IIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSL-QFPYFVRTTQSDQYQMAAIAEI 158
IIG + S +S + N +PL+S+ A+ LS+ QFPYF RT SD Q A+A +
Sbjct: 147 IIGDSGSTLSMAISRLLNLFHIPLVSYFASCACLSNKHQFPYFFRTIPSDVNQANALARL 206
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVKVA 218
V H+GW V + DD +GR GI + +S++ + T+ ++ D++ +
Sbjct: 207 VKHFGWTWVGTVGADDAYGRTGIDLFTAAVTQLGVCVSYRIIIPKLPTQQQLQDIVRTIR 266
Query: 219 LTESRIIVVHT-HYNRGPVVFHVAQYLGMLGTGYVWIAT-SWL-STALDTNSPFPS 271
+ + ++V + PVV + L + TG W+A+ +W+ ST + T FPS
Sbjct: 267 DSSAHVLVAFAIEEDIKPVVDEIV--LQNV-TGKQWVASEAWVTSTLISTKENFPS 319
>UNIPROTKB|H7C3W7 [details] [associations]
symbol:TAS1R1 "Taste receptor type 1 member 1" species:9606
"Homo sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000337 PRINTS:PR00248 Pfam:PF01094 GO:GO:0016021
GO:GO:0004930 InterPro:IPR001828 EMBL:AL591866 HGNC:HGNC:14448
ChiTaRS:TAS1R1 ProteinModelPortal:H7C3W7 Ensembl:ENST00000411823
Uniprot:H7C3W7
Length = 406
Score = 196 (74.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 55/215 (25%), Positives = 102/215 (47%)
Query: 58 DVNSDPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVAN 117
DV SD + T L + +H + LH +A+IGP + + + +
Sbjct: 30 DVCSDSANVYATLRVLSLPGQHHIELQG--DLLHYSP-TVLAVIGPDSTNRAATTAALLS 86
Query: 118 ELQVPLLSFSATDPTLS-SLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDH 176
VP++S++A+ TLS Q+P F+RT +D+YQ+ + ++ +GW + + DD+
Sbjct: 87 PFLVPMISYAASSETLSVKRQYPSFLRTIPNDKYQVETMVLLLQKFGWTWISLVGSSDDY 146
Query: 177 GRNGIAALGDTLAAKRCRISFK--APLSVEATEDEITDLLVKVALTESRIIVVHTHYNRG 234
G+ G+ AL + + I+FK P S + ++ + L+ +A + ++VV +
Sbjct: 147 GQLGVQALENQATGQGICIAFKDIMPFSAQVGDERMQCLMRHLAQAGATVVVVFSSRQLA 206
Query: 235 PVVFHVAQYLGMLGTGYVWIAT-SWLSTALDTNSP 268
V F + TG VW+A+ +W + T P
Sbjct: 207 RVFFESVVLTNL--TGKVWVASEAWALSRHITGVP 239
>RGD|621704 [details] [associations]
symbol:Grin3a "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3A" species:10116 "Rattus norvegicus"
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IDA;TAS] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IDA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006816 "calcium
ion transport" evidence=ISO;IDA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016358
"dendrite development" evidence=IEA;ISO] [GO:0016594 "glycine
binding" evidence=ISO;IDA] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0034220 "ion transmembrane
transport" evidence=ISO] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IDA] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IEA;ISO] [GO:0045202
"synapse" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=ISO;IDA] [GO:0045471 "response to ethanol"
evidence=IEA;ISO] [GO:0048511 "rhythmic process" evidence=IDA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IDA]
[GO:0060134 "prepulse inhibition" evidence=IEA;ISO] [GO:0070588
"calcium ion transmembrane transport" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621704 GO:GO:0014069
GO:GO:0045471 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0016358 GO:GO:0060134 GO:GO:0048511
GO:GO:0030288 GO:GO:0006816 GO:GO:0051721 InterPro:IPR001828
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 CTD:116443 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 KO:K05213 OMA:QSQGEMM
OrthoDB:EOG480HW2 GO:GO:0004972 EMBL:L34938 EMBL:U29873
EMBL:AF073379 EMBL:AF061945 IPI:IPI00207422 IPI:IPI00464475
PIR:T31068 RefSeq:NP_001185512.1 RefSeq:NP_612555.1
UniGene:Rn.180226 PDB:2RC7 PDB:2RC8 PDB:2RC9 PDBsum:2RC7
PDBsum:2RC8 PDBsum:2RC9 ProteinModelPortal:Q9R1M7 SMR:Q9R1M7
IntAct:Q9R1M7 STRING:Q9R1M7 PRIDE:Q9R1M7 Ensembl:ENSRNOT00000007957
GeneID:191573 KEGG:rno:191573 UCSC:RGD:621704 InParanoid:Q9R1M7
BindingDB:Q9R1M7 ChEMBL:CHEMBL342 EvolutionaryTrace:Q9R1M7
NextBio:622654 Genevestigator:Q9R1M7 GermOnline:ENSRNOG00000005723
Uniprot:Q9R1M7
Length = 1135
Score = 225 (84.3 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 105/452 (23%), Positives = 182/452 (40%)
Query: 479 SFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGD--GHNNPSCTELVRLITA 536
S + V +K + G+CID+ + + ++ G N T LV + +
Sbjct: 563 SSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLS 622
Query: 537 GVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTA 596
G + AV +I T R+++ DFT P+ + L ++ R + AF+ P MW
Sbjct: 623 GTANMAVTSFSINTARSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMW--LG 680
Query: 597 IFFLAVGAVVWILEHRLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHKEKTVSAL------ 648
IF +++ + F PK R +F FS + + +A +A+
Sbjct: 681 IFVALHITAIFLTLYEWKSPFGMTPKGRNRNKVFSFSSALNVCYALLFGRTAAIKPPKCW 740
Query: 649 -GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQVNS 703
GR S+YTA+L +++ +K+ + GI + S + G S
Sbjct: 741 TGRFLMNLWAIFCMFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRES 800
Query: 704 FARNYLVDELNIDESRLVPLNSPE--EYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTR 759
A +Y+ + N P + + LK+ P K + A + D+A E+ +
Sbjct: 801 SAEDYVRQSFPEMHEYMRRYNVPATPDGVQYLKNDPEK--LDAFIMDKALLDYEVSIDAD 858
Query: 760 CEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQG- 818
C+ VG+ F G+G P +SPL +IS I + +G + +HDKW C +
Sbjct: 859 CKLLTVGKPFAIEGYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSF 918
Query: 819 AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQ-IVHQFSR-HYPGDTESNGGSSRSAR 876
A + ++ +K FS + + IVH+ ++ S R
Sbjct: 919 AVTETLQMGIKHFSGLFVLLCIGFGLSILTTIGEHIVHRLLLPRIKNKSKLQYWLHTSQR 978
Query: 877 LQTFL--SFVNEKEDEVKSRSKRRHVERTSYR 906
L SFV EK+ RSK + VE++ +R
Sbjct: 979 FHRALNTSFVEEKQP----RSKTKRVEKSRWR 1006
Score = 39 (18.8 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 301 RNLTDAKTPNGYIGLNAYG--------FYAYDTVWLLARAI 333
+N+ + +T +GL A+G +Y D + L+ARA+
Sbjct: 360 QNVEELRTEGLPLGLIAHGKTTQSVFEYYVQDAMELVARAV 400
Score = 37 (18.1 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 31 VVNIGALLSFSTNVGKVAKLAIKAAV 56
V + ALL+F + G++ +L + ++V
Sbjct: 190 VQGVSALLAFPQSQGEMMELDLVSSV 215
>ZFIN|ZDB-GENE-060208-2 [details] [associations]
symbol:tas1r1 "taste receptor, type 1, member 1"
species:7955 "Danio rerio" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000337 InterPro:IPR011500
InterPro:IPR017978 InterPro:IPR017979 Pfam:PF00003 Pfam:PF07562
PRINTS:PR00248 PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
ZFIN:ZDB-GENE-060208-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
InterPro:IPR001828 CTD:80835 HOVERGEN:HBG108601 KO:K04624
EMBL:AB200899 IPI:IPI00920781 RefSeq:NP_001034614.2
UniGene:Dr.88036 ProteinModelPortal:Q2MHL2 GeneID:654781
KEGG:dre:654781 NextBio:20902278 Uniprot:Q2MHL2
Length = 821
Score = 201 (75.8 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 71/247 (28%), Positives = 121/247 (48%)
Query: 51 AIKAAVDDVNS---DPTTLGGTKLKLQMQD-CN-HSGFLA----LAEALH--LMEGQTVA 99
A + AVD++N+ D L G L + D C+ + LA LA+ LH ++ + VA
Sbjct: 67 AFRYAVDEINNGTQDKQLLPGVTLGYRTYDICSLPASNLATLDLLAQQLHPSAVDSRAVA 126
Query: 100 IIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSS-LQFPYFVRTTQSDQYQMAAIAEI 158
IIGP + + + VP +S+ AT+ LS+ L +P F RT SD+ Q+ A+ ++
Sbjct: 127 IIGPDSSSYAFTPAAALGVFLVPQISYEATNELLSNKLLYPSFFRTIPSDKNQVNAMIQV 186
Query: 159 VDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKA--PLSVEATEDEITDLLVK 216
+ + W + + D+ +G G+ +L + I+++A P ++T+ + D++
Sbjct: 187 LVKFNWTWIALLGSDNSYGIQGMQSLSEQAPLNNICIAYQAQIPAVTDSTKKYMQDMVKN 246
Query: 217 VALTESRIIVVHTHYNR--GPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPS-DV 273
+ T+ IVV + R G F +AQ + TG VWI T S A T S P +
Sbjct: 247 ILKTKVNTIVVFANKRRAAGFFPFVIAQNV----TGKVWIGTEDWSVA-STVSSIPGISM 301
Query: 274 MDDIQGV 280
+ + GV
Sbjct: 302 IGTVIGV 308
>RGD|2738 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, N-methyl D-aspartate
2B" species:10116 "Rattus norvegicus" [GO:0001101 "response to acid"
evidence=IEP] [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001662 "behavioral fear response"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=IEA;ISO]
[GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0001975
"response to amphetamine" evidence=IEP] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA;ISO;IDA] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005149 "interleukin-1 receptor binding" evidence=IPI]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006816 "calcium ion transport" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0007423
"sensory organ development" evidence=IEA;ISO] [GO:0007611 "learning
or memory" evidence=TAS] [GO:0007612 "learning" evidence=IEA;ISO]
[GO:0007613 "memory" evidence=IEA;ISO;IDA] [GO:0007616 "long-term
memory" evidence=IEP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008021 "synaptic vesicle" evidence=IEA;ISO]
[GO:0008144 "drug binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0008306 "associative learning"
evidence=IMP] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009790 "embryo development" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010042 "response to
manganese ion" evidence=IEP] [GO:0010350 "cellular response to
magnesium starvation" evidence=IEP] [GO:0010942 "positive regulation
of cell death" evidence=IMP;IDA] [GO:0014049 "positive regulation of
glutamate secretion" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016594
"glycine binding" evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=IEA;ISO;IDA]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0021987
"cerebral cortex development" evidence=IEP] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA] [GO:0031749
"D2 dopamine receptor binding" evidence=IPI] [GO:0032026 "response to
magnesium ion" evidence=IEP] [GO:0033555 "multicellular organismal
response to stress" evidence=IEP] [GO:0034097 "response to cytokine
stimulus" evidence=IEP] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035255 "ionotropic glutamate receptor
binding" evidence=IPI] [GO:0042165 "neurotransmitter binding"
evidence=IDA] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042596 "fear response" evidence=ISO] [GO:0042734 "presynaptic
membrane" evidence=ISO;IDA] [GO:0043005 "neuron projection"
evidence=ISO;IDA] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043408 "regulation of MAPK cascade" evidence=IMP] [GO:0045202
"synapse" evidence=ISO;IDA;TAS] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEA;IEP;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IEA;ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048266 "behavioral
response to pain" evidence=IEA;ISO] [GO:0048511 "rhythmic process"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=IEA;ISO] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051602 "response to electrical
stimulus" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA;ISO] [GO:0060416
"response to growth hormone stimulus" evidence=IEP] [GO:0060992
"response to fungicide" evidence=IEP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO] [GO:0071230 "cellular response
to amino acid stimulus" evidence=IEP] [GO:0071287 "cellular response
to manganese ion" evidence=IEP] [GO:0071359 "cellular response to
dsRNA" evidence=IEP] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEP] [GO:0071396 "cellular response to lipid"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738
GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966 GO:GO:0051602
GO:GO:0008270 GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975 GO:GO:0014049
GO:GO:0048511 GO:GO:0030288 GO:GO:0051707 GO:GO:0043083 GO:GO:0010942
GO:GO:0001508 GO:GO:0008306 GO:GO:0043113 GO:GO:0033555 GO:GO:0046982
GO:GO:0009743 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0051597 GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0043408 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0071359 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 TCDB:1.A.10.1.6
CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419
IPI:IPI00326061 PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711
PDB:3JPW PDB:3JPY PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY
PDBsum:3QEL PDBsum:3QEM ProteinModelPortal:Q00960 SMR:Q00960
DIP:DIP-33702N IntAct:Q00960 MINT:MINT-104014 STRING:Q00960
PhosphoSite:Q00960 PRIDE:Q00960 GeneID:24410 KEGG:rno:24410
UCSC:RGD:2738 InParanoid:Q00960 BindingDB:Q00960 ChEMBL:CHEMBL311
EvolutionaryTrace:Q00960 NextBio:603231 Genevestigator:Q00960
GermOnline:ENSRNOG00000008766 Uniprot:Q00960
Length = 1482
Score = 162 (62.1 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 80/369 (21%), Positives = 151/369 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GHN-NPSCTELV-RLITAGVYDAAVGDIAIIT 550
GFCID+ + + L+ G G N + ++ ++ Y AVG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAY-MAVGSLTINE 517
Query: 551 NRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWIL 609
R+++ DF+ P+IE+G+ V+ + AFL PF+ +W + + L V AV V++
Sbjct: 518 ERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 610 EH-------RLNDEFRGP--PKRQVVTIFWFSFSTMF--FAHKEKTVSALGRXXXXXXXX 658
E+ R + R P P + W + +F + +
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF 637
Query: 659 XXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL-NIDE 717
+SYTA+L + + ++ + G+ + P N F+ + + N
Sbjct: 638 FAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQR-P-----NDFSPPFRFGTVPNGST 691
Query: 718 SRLVPLNSPEEYA-------KALKDGP---HKGGVAAVVDDRAYAELFLSTR---CEFSI 764
R + N E +A + + D G + A + D A +++ R C+
Sbjct: 692 ERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLN-YMAGRDEGCKLVT 750
Query: 765 VG--QVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ----- 817
+G +VF G+G A +DS + AIL+L +G+++ + WL C ++
Sbjct: 751 IGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVM 809
Query: 818 GAKLDVDRL 826
++LD+D +
Sbjct: 810 SSQLDIDNM 818
Score = 97 (39.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 53/267 (19%), Positives = 107/267 (40%)
Query: 93 MEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSL--QFPYFVRTTQSDQY 150
++G A Q+A+ + ++ ++ + P+L + + + F + S +
Sbjct: 94 IQGVVFADDTDQEAI-AQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSIEQ 152
Query: 151 QMAAIAEIVDHYGWR--EVIAIYVD--DDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
Q + + I++ Y W ++ Y D + + ++ +S++
Sbjct: 153 QASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDG 212
Query: 207 EDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT- 265
+ +I + L K+ +S II+++ +F VA +G+ G GY WI S ++ DT
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTV 269
Query: 266 NSPFPSDVM----DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFY 321
S FP+ ++ D+ L R +++ + P N +
Sbjct: 270 PSEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSC-YNTHEKR 328
Query: 322 AYDTVWLLARAINSFFKQGGNLSFSKD 348
Y + L IN F +G NLSFS+D
Sbjct: 329 IYQSNMLNRYLINVTF-EGRNLSFSED 354
>UNIPROTKB|Q00960 [details] [associations]
symbol:Grin2b "Glutamate receptor ionotropic, NMDA 2B"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738 GO:GO:0021987
GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0008144 GO:GO:0042220
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975
GO:GO:0014049 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043083 GO:GO:0010942 GO:GO:0001508 GO:GO:0008306
GO:GO:0043113 GO:GO:0033555 GO:GO:0046982 GO:GO:0009743
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597
GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 TCDB:1.A.10.1.6 CTD:2904 KO:K05210
OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419 IPI:IPI00326061
PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711 PDB:3JPW PDB:3JPY
PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY PDBsum:3QEL PDBsum:3QEM
ProteinModelPortal:Q00960 SMR:Q00960 DIP:DIP-33702N IntAct:Q00960
MINT:MINT-104014 STRING:Q00960 PhosphoSite:Q00960 PRIDE:Q00960
GeneID:24410 KEGG:rno:24410 UCSC:RGD:2738 InParanoid:Q00960
BindingDB:Q00960 ChEMBL:CHEMBL311 EvolutionaryTrace:Q00960
NextBio:603231 Genevestigator:Q00960 GermOnline:ENSRNOG00000008766
Uniprot:Q00960
Length = 1482
Score = 162 (62.1 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 80/369 (21%), Positives = 151/369 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GHN-NPSCTELV-RLITAGVYDAAVGDIAIIT 550
GFCID+ + + L+ G G N + ++ ++ Y AVG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAY-MAVGSLTINE 517
Query: 551 NRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWIL 609
R+++ DF+ P+IE+G+ V+ + AFL PF+ +W + + L V AV V++
Sbjct: 518 ERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 610 EH-------RLNDEFRGP--PKRQVVTIFWFSFSTMF--FAHKEKTVSALGRXXXXXXXX 658
E+ R + R P P + W + +F + +
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF 637
Query: 659 XXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL-NIDE 717
+SYTA+L + + ++ + G+ + P N F+ + + N
Sbjct: 638 FAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQR-P-----NDFSPPFRFGTVPNGST 691
Query: 718 SRLVPLNSPEEYA-------KALKDGP---HKGGVAAVVDDRAYAELFLSTR---CEFSI 764
R + N E +A + + D G + A + D A +++ R C+
Sbjct: 692 ERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLN-YMAGRDEGCKLVT 750
Query: 765 VG--QVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ----- 817
+G +VF G+G A +DS + AIL+L +G+++ + WL C ++
Sbjct: 751 IGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVM 809
Query: 818 GAKLDVDRL 826
++LD+D +
Sbjct: 810 SSQLDIDNM 818
Score = 97 (39.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 53/267 (19%), Positives = 107/267 (40%)
Query: 93 MEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSL--QFPYFVRTTQSDQY 150
++G A Q+A+ + ++ ++ + P+L + + + F + S +
Sbjct: 94 IQGVVFADDTDQEAI-AQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSIEQ 152
Query: 151 QMAAIAEIVDHYGWR--EVIAIYVD--DDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
Q + + I++ Y W ++ Y D + + ++ +S++
Sbjct: 153 QASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDG 212
Query: 207 EDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT- 265
+ +I + L K+ +S II+++ +F VA +G+ G GY WI S ++ DT
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTV 269
Query: 266 NSPFPSDVM----DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFY 321
S FP+ ++ D+ L R +++ + P N +
Sbjct: 270 PSEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSC-YNTHEKR 328
Query: 322 AYDTVWLLARAINSFFKQGGNLSFSKD 348
Y + L IN F +G NLSFS+D
Sbjct: 329 IYQSNMLNRYLINVTF-EGRNLSFSED 354
>UNIPROTKB|Q5R1P3 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0007423 GO:GO:0045471 GO:GO:0046872
GO:GO:0007613 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966
GO:GO:0008270 GO:GO:0001701 GO:GO:0035235 GO:GO:0001967
GO:GO:0060079 GO:GO:0030288 GO:GO:0001662 InterPro:IPR001828
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0004972 HOVERGEN:HBG052635 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
EMBL:AB195992 RefSeq:NP_001008719.1 UniGene:Cfa.16222 HSSP:Q00959
ProteinModelPortal:Q5R1P3 SMR:Q5R1P3 STRING:Q5R1P3 PRIDE:Q5R1P3
Ensembl:ENSCAFT00000020886 GeneID:494009 KEGG:cfa:494009 CTD:2904
InParanoid:Q5R1P3 KO:K05210 OrthoDB:EOG4Z8XVM NextBio:20865538
Uniprot:Q5R1P3
Length = 1485
Score = 162 (62.1 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 80/369 (21%), Positives = 151/369 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GHN-NPSCTELV-RLITAGVYDAAVGDIAIIT 550
GFCID+ + + L+ G G N + ++ ++ Y AVG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAY-MAVGSLTINE 517
Query: 551 NRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWIL 609
R+++ DF+ P+IE+G+ V+ + AFL PF+ +W + + L V AV V++
Sbjct: 518 ERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 610 EH-------RLNDEFRGP--PKRQVVTIFWFSFSTMF--FAHKEKTVSALGRXXXXXXXX 658
E+ R + R P P + W + +F + +
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF 637
Query: 659 XXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL-NIDE 717
+SYTA+L + + ++ + G+ + P N F+ + + N
Sbjct: 638 FAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQR-P-----NDFSPPFRFGTVPNGST 691
Query: 718 SRLVPLNSPEEYA-------KALKDGP---HKGGVAAVVDDRAYAELFLSTR---CEFSI 764
R + N E +A + + D G + A + D A +++ R C+
Sbjct: 692 ERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLN-YMAGRDEGCKLVT 750
Query: 765 VG--QVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ----- 817
+G +VF G+G A +DS + AIL+L +G+++ + WL C ++
Sbjct: 751 IGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVM 809
Query: 818 GAKLDVDRL 826
++LD+D +
Sbjct: 810 SSQLDIDNM 818
Score = 97 (39.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 53/267 (19%), Positives = 107/267 (40%)
Query: 93 MEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSL--QFPYFVRTTQSDQY 150
++G A Q+A+ + ++ ++ + P+L + + + F + S +
Sbjct: 94 IQGVVFADDTDQEAI-AQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSIEQ 152
Query: 151 QMAAIAEIVDHYGWR--EVIAIYVD--DDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
Q + + I++ Y W ++ Y D + + ++ +S++
Sbjct: 153 QASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDG 212
Query: 207 EDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT- 265
+ +I + L K+ +S II+++ +F VA +G+ G GY WI S ++ DT
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTV 269
Query: 266 NSPFPSDVM----DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFY 321
S FP+ ++ D+ L R +++ + P N +
Sbjct: 270 PSEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSC-YNTHEKR 328
Query: 322 AYDTVWLLARAINSFFKQGGNLSFSKD 348
Y + L IN F +G NLSFS+D
Sbjct: 329 IYQSNMLNRYLINVTF-EGRNLSFSED 354
>UNIPROTKB|F1MCL3 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 CTD:2904 KO:K05210 OMA:CTNRSHL
EMBL:DAAA02014263 EMBL:DAAA02014253 EMBL:DAAA02014254
EMBL:DAAA02014255 EMBL:DAAA02014256 EMBL:DAAA02014257
EMBL:DAAA02014258 EMBL:DAAA02014259 EMBL:DAAA02014260
EMBL:DAAA02014261 EMBL:DAAA02014262 IPI:IPI00717585
RefSeq:NP_001179850.1 UniGene:Bt.61353 ProteinModelPortal:F1MCL3
Ensembl:ENSBTAT00000000263 GeneID:537804 KEGG:bta:537804
NextBio:20877218 Uniprot:F1MCL3
Length = 1497
Score = 162 (62.1 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 80/369 (21%), Positives = 151/369 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GHN-NPSCTELV-RLITAGVYDAAVGDIAIIT 550
GFCID+ + + L+ G G N + ++ ++ Y AVG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAY-MAVGSLTINE 517
Query: 551 NRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWIL 609
R+++ DF+ P+IE+G+ V+ + AFL PF+ +W + + L V AV V++
Sbjct: 518 ERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 610 EH-------RLNDEFRGP--PKRQVVTIFWFSFSTMF--FAHKEKTVSALGRXXXXXXXX 658
E+ R + R P P + W + +F + +
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF 637
Query: 659 XXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL-NIDE 717
+SYTA+L + + ++ + G+ + P N F+ + + N
Sbjct: 638 FAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQR-P-----NDFSPPFRFGTVPNGST 691
Query: 718 SRLVPLNSPEEYA-------KALKDGP---HKGGVAAVVDDRAYAELFLSTR---CEFSI 764
R + N E +A + + D G + A + D A +++ R C+
Sbjct: 692 ERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLN-YMAGRDEGCKLVT 750
Query: 765 VG--QVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ----- 817
+G +VF G+G A +DS + AIL+L +G+++ + WL C ++
Sbjct: 751 IGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVM 809
Query: 818 GAKLDVDRL 826
++LD+D +
Sbjct: 810 SSQLDIDNM 818
Score = 97 (39.2 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 53/267 (19%), Positives = 107/267 (40%)
Query: 93 MEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSL--QFPYFVRTTQSDQY 150
++G A Q+A+ + ++ ++ + P+L + + + F + S +
Sbjct: 94 IQGVVFADDTDQEAI-AQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSIEQ 152
Query: 151 QMAAIAEIVDHYGWR--EVIAIYVD--DDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
Q + + I++ Y W ++ Y D + + ++ +S++
Sbjct: 153 QASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDG 212
Query: 207 EDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT- 265
+ +I + L K+ +S II+++ +F VA +G+ G GY WI S ++ DT
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTV 269
Query: 266 NSPFPSDVM----DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFY 321
S FP+ ++ D+ L R +++ + P N +
Sbjct: 270 PSEFPTGLVSVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSC-YNTHEKR 328
Query: 322 AYDTVWLLARAINSFFKQGGNLSFSKD 348
Y + L IN F +G NLSFS+D
Sbjct: 329 IYQSNMLNRYLINVTF-EGRNLSFSED 354
>ZFIN|ZDB-GENE-070912-354 [details] [associations]
symbol:grin3b "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3B" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 ZFIN:ZDB-GENE-070912-354 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:CR392012 EMBL:CT954241
IPI:IPI00482751 Ensembl:ENSDART00000058111 Uniprot:E7F2N4
Length = 1118
Score = 210 (79.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 81/345 (23%), Positives = 144/345 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD--GHNNPSCTELVRLITAGVYDAAVGDIAIITN 551
G+CID+ + + ++ G + LV + +GV D AV +I +
Sbjct: 522 GYCIDLLEKLAEDMHFEFDLYIVGDGKYGAWKGGRWSGLVGDLLSGVADMAVTSFSINSA 581
Query: 552 RTKMADFTQPYIESGLVVVAPVRKLDSNA--WAFLSPFTPMMWGVTAIFFLAVGAVVWIL 609
R+++ DFT P+ + L ++ VR D+ A AF+ P MW IF ++I
Sbjct: 582 RSRVIDFTSPFFSTSLGIL--VRSKDTAAPIGAFMWPLHWSMW--VGIFVALHITALFIT 637
Query: 610 EHRLNDEFRGPPK-RQVVTIFWFSFS-----TMFFAHK--EKTVSA-LGRXXXXXXXXXX 660
+ N F P R + +F +S + + F KT GR
Sbjct: 638 LYEWNSPFGMTPHGRNRIRVFSYSSALNLCYAILFGRTVASKTPKCWTGRFLMNLWAIFC 697
Query: 661 XXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVN----SFARNYLVDELNID 716
SSYTA+L +++ +K + GI ++ + +G++ S A +Y+
Sbjct: 698 LLVLSSYTANLAAVMVGEKTFEEVSGIHDVKLHHPSLGFRFGTVRESSAEDYVKKSFPEM 757
Query: 717 ESRLVPLNSPE--EYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTRCEFSIVGQVFTKN 772
+ N P + LK P + + A + D+A E+ + C+ VG+ F
Sbjct: 758 HEYMRRFNKPTTPDGVSTLKTDPPQ--LDAFIMDKALLDYEVSIDADCKLLTVGKPFAIE 815
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P++SPL ++S + + +G + +HDKW C +
Sbjct: 816 GYGIGLPQNSPLTRNVSEYVSRYKSDGYMDMLHDKWYKVVPCGKR 860
Score = 44 (20.5 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 20/85 (23%), Positives = 36/85 (42%)
Query: 313 IGLNAYG--------FYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDSLR 364
+GL AYG FY DT+ L+ RA+ + +L+ ++ + + +
Sbjct: 299 LGLMAYGEVNRKPLNFYIRDTLQLIGRAVYAATMVRPDLALIQNM----VNCFDKPNKHE 354
Query: 365 IFNGGNLLRDSILQANMTGTAGPAR 389
+ + G L + + TG GP R
Sbjct: 355 LPSSGQYLARFLSNTSFTGLTGPVR 379
Score = 40 (19.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 225 IVVHTHYNRGPVVFHVAQYLGMLGTGYVWIAT 256
++ + NR P+ F++ L ++G V+ AT
Sbjct: 301 LMAYGEVNRKPLNFYIRDTLQLIGRA-VYAAT 331
>MGI|MGI:95822 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, NMDA2C (epsilon
3)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006812 "cation transport" evidence=IMP]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0009611
"response to wounding" evidence=IGI] [GO:0014069 "postsynaptic
density" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0033058
"directional locomotion" evidence=IGI] [GO:0034220 "ion
transmembrane transport" evidence=IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IGI] [GO:0042391 "regulation of membrane potential"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0060079 "regulation
of excitatory postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95822 GO:GO:0005737
GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905
HOVERGEN:HBG052636 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
EMBL:D10694 IPI:IPI00321321 PIR:I49705 RefSeq:NP_034480.2
UniGene:Mm.39090 ProteinModelPortal:Q01098 SMR:Q01098 IntAct:Q01098
MINT:MINT-104161 STRING:Q01098 PhosphoSite:Q01098 PaxDb:Q01098
PRIDE:Q01098 Ensembl:ENSMUST00000003351 Ensembl:ENSMUST00000106554
GeneID:14813 KEGG:mmu:14813 HOGENOM:HOG000231061 InParanoid:Q01098
BindingDB:Q01098 ChEMBL:CHEMBL3555 NextBio:287007 Bgee:Q01098
Genevestigator:Q01098 GermOnline:ENSMUSG00000020734 Uniprot:Q01098
Length = 1239
Score = 124 (48.7 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVY----DAAVGDIAII 549
GFCID+ ++ ++ Y L +G + + + VY D A+G + I
Sbjct: 456 GFCIDILKKLAKVVKFS--YDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTIN 513
Query: 550 TNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWI 608
R+++ DF+ P++E+G+ V+ + AFL P++P +W + + L V A+ V++
Sbjct: 514 EERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFM 573
Query: 609 LEH 611
E+
Sbjct: 574 FEY 576
Score = 96 (38.9 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 42/180 (23%), Positives = 76/180 (42%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVNSFARNYLVDELNIDE 717
+SYTA+L + + ++ + G+ + YP G N +
Sbjct: 641 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMH 700
Query: 718 SRLVPLN--SPEEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFTK 771
+ +V N S E+ +LK G + AAV++ A + C+ +G +VF
Sbjct: 701 THMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKD----EGCKLVTIGSGKVFAT 756
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDRL 826
G+G A +DS I A+L+ +G+ Q++ WL C ++ +KLD+D +
Sbjct: 757 TGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWL-SGICHNEKNEVMSSKLDIDNM 815
Score = 85 (35.0 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 41/196 (20%), Positives = 84/196 (42%)
Query: 105 DAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFP--YFVRTTQSDQYQMAAIAEIVDHY 162
+AV + ++ V+++ VP+LS S + + + P F++ S + Q+ + ++++ Y
Sbjct: 102 EAV-AQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 163 GWREVIAIY-VDDDHGR--NGIAALGD-TLAAKRCRISFKAPLSVEATEDEITDLLVKVA 218
W I + H G+ A+ D + + R L LL +V
Sbjct: 161 DWSAFAVITSLHPGHALFLEGVRAVADASYLSWRLLDVLTLELGPGGPRARTQRLLRQV- 219
Query: 219 LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTN-SPFPSDVMDDI 277
++ ++V + V+F A G++G G+VW+ + + D + FP ++ +
Sbjct: 220 --DAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPNLALGSTDAPPAAFPVGLISVV 277
Query: 278 QGV--LTLRTYTPDSV 291
L+LR D V
Sbjct: 278 TESWRLSLRQKVRDGV 293
>UNIPROTKB|F1MP46 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0042177 "negative regulation
of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0050885
GO:GO:0060079 GO:GO:0030288 GO:GO:0005261 GO:GO:0042177
InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTWRRIS EMBL:DAAA02049538
IPI:IPI00999923 Ensembl:ENSBTAT00000015137 Uniprot:F1MP46
Length = 1242
Score = 124 (48.7 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELVRLITAGVY----DAAVGDIAII 549
GFCID+ ++ ++ Y L +G + + + VY D A+G + I
Sbjct: 470 GFCIDILKKLARVVRFS--YDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTIN 527
Query: 550 TNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWI 608
R+++ DF+ P++E+G+ V+ + AFL P++P +W + + L V A+ V++
Sbjct: 528 EERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFM 587
Query: 609 LEH 611
E+
Sbjct: 588 FEY 590
Score = 97 (39.2 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 42/180 (23%), Positives = 76/180 (42%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYP---IGYQVNSFARNYLVDELNIDE 717
+SYTA+L + + ++ + G+ + YP G N +
Sbjct: 655 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMH 714
Query: 718 SRLVPLN--SPEEYAKALKDGPHKGGV--AAVVDDRAYAELFLSTRCEFSIVG--QVFTK 771
+ +V N S E+ +LK G + AAV++ A + C+ +G +VF
Sbjct: 715 THMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKD----EGCKLVTIGSGKVFAT 770
Query: 772 NGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ-----GAKLDVDRL 826
G+G A +DS I A+L+ +G+ Q++ WL C ++ +KLD+D +
Sbjct: 771 TGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWL-SGICQNEKNEVMSSKLDIDNM 829
Score = 84 (34.6 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 40/196 (20%), Positives = 84/196 (42%)
Query: 105 DAVTSHVVSHVANELQVPLLSFSATDPTLSSLQFP--YFVRTTQSDQYQMAAIAEIVDHY 162
+AV + ++ ++++ VP+LS S + + + F++ S + Q+ + ++++ Y
Sbjct: 115 EAV-AQILDFISSQTHVPILSISGGSAVVLTPKESGSAFLQLGVSLEQQLQVLFKVLEEY 173
Query: 163 GWREVIAIY-VDDDHGR--NGIAALGD-TLAAKRCRISFKAPLSVEATEDEITDLLVKVA 218
W I + H G+ A+ D + + R L LL ++
Sbjct: 174 DWSAFAVITSLHPGHALFLEGVRAVTDASYLSWRLLDVLTLELGPGGARQHTQRLLRQL- 232
Query: 219 LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTN-SPFPSDVMDDI 277
++ ++V + V+F A G++G G+VW+ S + DT + FP ++ +
Sbjct: 233 --DAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPSLALGSTDTPPAAFPVGLISVV 290
Query: 278 QGV--LTLRTYTPDSV 291
L+LR D V
Sbjct: 291 TESWRLSLRQKVRDGV 306
>UNIPROTKB|F1SSA9 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016358 "dendrite development" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0016358 GO:GO:0035235 GO:GO:0043005 GO:GO:0060134
GO:GO:0030288 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 OMA:QSQGEMM GO:GO:0004972
EMBL:AEMK01037328 EMBL:CU104758 EMBL:CU313312
Ensembl:ENSSSCT00000005943 Uniprot:F1SSA9
Length = 1116
Score = 213 (80.0 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 113/487 (23%), Positives = 192/487 (39%)
Query: 479 SFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGH----NNPSCTELVRLI 534
S + V +K + G+CID+ + + + L GDG N T LV +
Sbjct: 566 SGNDTVPIKFKKCCYGYCIDLLEKLSEDMNF--DFDLYIVGDGKYGAWKNGHWTGLVGDL 623
Query: 535 TAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGV 594
+ + AV +I T R+++ DFT P+ + L ++ R + AF+ P MW
Sbjct: 624 SGSAH-MAVTSFSINTARSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMW-- 680
Query: 595 TAIFFLAVGAVVWILEHRLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHKEKTVSAL---- 648
IF +++ + F PK R +F FS + + +A +A+
Sbjct: 681 LGIFVALHITAIFLTLYEWKSPFGMTPKGRNRNKVFSFSSALNVCYALLFGRTAAIKPPK 740
Query: 649 ---GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQV 701
GR S+YTA+L +++ +K+ + GI + S + G
Sbjct: 741 CWTGRFLMNLWAIFCMFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVR 800
Query: 702 NSFARNYLVDELNIDESRLVPLNSPE--EYAKALKDGPHKGGVAAVVDDRAYA--ELFLS 757
S A +Y+ + N P + + LK+ P K + A + D+A E+ +
Sbjct: 801 ESSAEDYVRQSFPEMHEYMRRYNVPATLDGVEYLKNDPEK--LDAFIMDKALLDYEVSVD 858
Query: 758 TRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
C+ VG+ F G+G P +SPL +IS I + +G + +HDKW C +
Sbjct: 859 ADCKLLTVGKPFAIEGYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKR 918
Query: 818 G-AKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQ-IVHQFSR-HYPGDTESNGGSSRS 874
A + ++ +K FS + + IV+ + S
Sbjct: 919 SFAVTETLQMGIKHFSGLFVLLCIGFGLSILTTIGEHIVYWLLLPRIKNKSRLQYWLHTS 978
Query: 875 ARLQTFL--SFVNEKEDEVKSRSKRRHVERTSYRSEDEMSSCN-SNRKHIELSSNLSLDS 931
RL L SFV EK+ R K + VE+ S +++ N SN H + + D
Sbjct: 979 QRLHRALNTSFVEEKQQ----RFKTKRVEKRSNMGPRQLAVWNTSNLSHDQRRKYIFSDE 1034
Query: 932 DTRNCNG 938
+N G
Sbjct: 1035 GGQNQPG 1041
Score = 40 (19.1 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 31 VVNIGALLSFSTNVGKVAKLAIKAAV 56
V + ALL+F ++G++ +L + ++V
Sbjct: 190 VQGVSALLAFPQSLGEMMELDLVSSV 215
>FB|FBgn0020429 [details] [associations]
symbol:GluRIIB "Glutamate receptor IIB" species:7227
"Drosophila melanogaster" [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0051968
"positive regulation of synaptic transmission, glutamatergic"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:1900075 "positive regulation of neuromuscular synaptic
transmission" evidence=IMP] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IPI] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IMP] [GO:0060025 "regulation of
synaptic activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0031594 GO:GO:0030288
InterPro:IPR001828 GO:GO:0004971 GO:GO:0005234 GO:GO:0015277
HSSP:P19491 EMBL:AF044202 ProteinModelPortal:O45028 SMR:O45028
STRING:O45028 PRIDE:O45028 FlyBase:FBgn0020429 eggNOG:NOG241128
InParanoid:O45028 OrthoDB:EOG4ZS7J3 ArrayExpress:O45028 Bgee:O45028
Uniprot:O45028
Length = 913
Score = 134 (52.2 bits), Expect = 7.3e-12, Sum P(3) = 7.3e-12
Identities = 41/177 (23%), Positives = 80/177 (45%)
Query: 664 NSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDELNIDESRLV-- 721
+ +Y A L + +T K++ I + L N + A + E N ++R+
Sbjct: 641 SQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVYFSESNDTDNRMAWN 700
Query: 722 -PLN-SPEEYAKALKDG--PHK--GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWG 775
L+ P+ + K ++ P K G A + + + ++ CE + +G+ F + +G
Sbjct: 701 KMLSFKPDAFTKNNEEAVDPVKLSKGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHYG 760
Query: 776 FAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL--RSACSSQGAKLDVDRLQLKS 830
A P ++ ++S IL+LSE G+L ++ +KW S C S +D + + S
Sbjct: 761 IAVPLNADFRSNLSVGILRLSERGELFKLRNKWFNSNESTCDSNVPTIDDGQFDMDS 817
Score = 89 (36.4 bits), Expect = 7.3e-12, Sum P(3) = 7.3e-12
Identities = 34/157 (21%), Positives = 70/157 (44%)
Query: 471 RIGVPNRVSFREF---VSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLI---PFGD-GHN 523
R+G P S+RE V +G+E G+ +D+ + ++ + +G N
Sbjct: 429 RVGKPY-FSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDAN 487
Query: 524 NPSCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVA---PVRKLDSNA 580
++R + + D+ I R + DFT P+++ G+ +++ P K D
Sbjct: 488 TDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYKEPPPKAD--I 545
Query: 581 WAFLSPFTPMMWGVTAIFFLAVGAVVWILEHRLNDEF 617
+AFL+P+ +W + + + + A I R+ D++
Sbjct: 546 YAFLNPYNAEVW-LFVMIAMMITAFALIFTGRI-DQY 580
Score = 76 (31.8 bits), Expect = 7.3e-12, Sum P(3) = 7.3e-12
Identities = 64/286 (22%), Positives = 111/286 (38%)
Query: 16 LFVYRITAQASGRPSVVNIGALLSFSTNVGKVAKLAIKAAVDDVNS-DPTT-LGGTKLKL 73
L I + A+ V+ IGA+ F T + K+A A AA+++VN+ +P L K +
Sbjct: 9 LLALAIASGANEDTLVIKIGAIF-FDTEM-KLAD-AFSAALEEVNAINPALKLDAIKRYV 65
Query: 74 QMQDCNHSGFLALAE-ALHLMEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPT 132
+ D + L + + L+ AI GP S +V + N +P L F P
Sbjct: 66 TVDDS-----IVLQDISCDLIGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFD-WHPQ 119
Query: 133 LSS---LQFPYFVRTTQSDQYQMAAIAEIVDH--YGWREVIAIYVDDDHGRNGIAALGDT 187
S+ + V + AA ++I+ + W+ Y H + L
Sbjct: 120 QSNRERMNHQLTVNVAPMELSLSAAFSDILASKTFDWKSFTIAYERSSH----LIRLQHI 175
Query: 188 LAAKRCRISFKAPLSVEATE--DEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLG 245
LA K+ KA + ++ E D+ L ++ + +++ + V + +
Sbjct: 176 LAWKQLH---KAGIKMQEFERGDDYRILWKRINNAREKFVLLDCPSDILVDVINASIGYN 232
Query: 246 MLGTGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTLRTYTPDSV 291
M G+ T+ L T L F S + +RTY P V
Sbjct: 233 MTGSFNHLFLTN-LDTHLSGIDGFYSRDFTVAVAAVRIRTYVPPPV 277
>UNIPROTKB|Q13224 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016594 "glycine binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0007611
"learning or memory" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0043005 "neuron
projection" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0030018 GO:GO:0071363
GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0007268
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0043005
GO:GO:0007616 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0001975 GO:GO:0014049 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043083
GO:GO:0010942 GO:GO:0001508 GO:GO:0008306 GO:GO:0043113
GO:GO:0009743 Pathway_Interaction_DB:reelinpathway GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597 GO:GO:0060416
GO:GO:0071230 GO:GO:0071396 DrugBank:DB00836 Orphanet:178469
GO:GO:0001964 GO:GO:0050806 GO:GO:0032026 DrugBank:DB00502
DrugBank:DB01043 DrugBank:DB00949 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM
EMBL:U90278 EMBL:U88963 EMBL:U11287 EMBL:BC113618 EMBL:BC113620
EMBL:U28758 EMBL:U28861 EMBL:U28862 IPI:IPI00297933 PIR:I39066
PIR:S52086 RefSeq:NP_000825.2 UniGene:Hs.654430 PDB:1S11 PDB:1S2S
PDB:2IPV PDBsum:1S11 PDBsum:1S2S PDBsum:2IPV
ProteinModelPortal:Q13224 SMR:Q13224 IntAct:Q13224 MINT:MINT-127466
STRING:Q13224 PhosphoSite:Q13224 DMDM:14548162 PaxDb:Q13224
PeptideAtlas:Q13224 PRIDE:Q13224 Ensembl:ENST00000279593
GeneID:2904 KEGG:hsa:2904 UCSC:uc001rbt.2 GeneCards:GC12M013614
H-InvDB:HIX0036873 HGNC:HGNC:4586 MIM:138252 MIM:613970
neXtProt:NX_Q13224 PharmGKB:PA28980 InParanoid:Q13224 OMA:CTNRSHL
PhylomeDB:Q13224 BindingDB:Q13224 ChEMBL:CHEMBL1904 GenomeRNAi:2904
NextBio:11499 ArrayExpress:Q13224 Bgee:Q13224 CleanEx:HS_GRIN2B
Genevestigator:Q13224 GermOnline:ENSG00000150086 Uniprot:Q13224
Length = 1484
Score = 162 (62.1 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 80/369 (21%), Positives = 151/369 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GHN-NPSCTELV-RLITAGVYDAAVGDIAIIT 550
GFCID+ + + L+ G G N + ++ ++ Y AVG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAY-MAVGSLTINE 517
Query: 551 NRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWIL 609
R+++ DF+ P+IE+G+ V+ + AFL PF+ +W + + L V AV V++
Sbjct: 518 ERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 577
Query: 610 EH-------RLNDEFRGP--PKRQVVTIFWFSFSTMF--FAHKEKTVSALGRXXXXXXXX 658
E+ R + R P P + W + +F + +
Sbjct: 578 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF 637
Query: 659 XXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL-NIDE 717
+SYTA+L + + ++ + G+ + P N F+ + + N
Sbjct: 638 FAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQR-P-----NDFSPPFRFGTVPNGST 691
Query: 718 SRLVPLNSPEEYA-------KALKDGP---HKGGVAAVVDDRAYAELFLSTR---CEFSI 764
R + N E +A + + D G + A + D A +++ R C+
Sbjct: 692 ERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLN-YMAGRDEGCKLVT 750
Query: 765 VG--QVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ----- 817
+G +VF G+G A +DS + AIL+L +G+++ + WL C ++
Sbjct: 751 IGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVM 809
Query: 818 GAKLDVDRL 826
++LD+D +
Sbjct: 810 SSQLDIDNM 818
Score = 94 (38.1 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 52/267 (19%), Positives = 107/267 (40%)
Query: 93 MEGQTVAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSL--QFPYFVRTTQSDQY 150
++G A Q+A+ + ++ ++ + P+L + + + F + S +
Sbjct: 94 IQGVVFADDTDQEAI-AQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQFGPSIEQ 152
Query: 151 QMAAIAEIVDHYGWR--EVIAIYVD--DDHGRNGIAALGDTLAAKRCRISFKAPLSVEAT 206
Q + + I++ Y W ++ Y D + + ++ +S++
Sbjct: 153 QASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDG 212
Query: 207 EDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDT- 265
+ +I + L K+ +S II+++ +F VA +G+ G GY WI S ++ DT
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTDTV 269
Query: 266 NSPFPSDVM----DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNGYIGLNAYGFY 321
+ FP+ ++ D+ L R +++ + P N +
Sbjct: 270 PAEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKSSC-YNTHEKR 328
Query: 322 AYDTVWLLARAINSFFKQGGNLSFSKD 348
Y + L IN F +G NLSFS+D
Sbjct: 329 IYQSNMLNRYLINVTF-EGRNLSFSED 354
>UNIPROTKB|F1SQ84 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTNRSHL EMBL:CU463198
EMBL:CU694276 Ensembl:ENSSSCT00000000660 Uniprot:F1SQ84
Length = 1351
Score = 162 (62.1 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 80/369 (21%), Positives = 151/369 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GHN-NPSCTELV-RLITAGVYDAAVGDIAIIT 550
GFCID+ + + L+ G G N + ++ ++ Y AVG + I
Sbjct: 326 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAY-MAVGSLTINE 384
Query: 551 NRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFFLAVGAV-VWIL 609
R+++ DF+ P+IE+G+ V+ + AFL PF+ +W + + L V AV V++
Sbjct: 385 ERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 444
Query: 610 EH-------RLNDEFRGP--PKRQVVTIFWFSFSTMF--FAHKEKTVSALGRXXXXXXXX 658
E+ R + R P P + W + +F + +
Sbjct: 445 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF 504
Query: 659 XXXXXNSSYTASLTSILTVQKLSSPIKGIDSLRSSNYPIGYQVNSFARNYLVDEL-NIDE 717
+SYTA+L + + ++ + G+ + P N F+ + + N
Sbjct: 505 FAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQR-P-----NDFSPPFRFGTVPNGST 558
Query: 718 SRLVPLNSPEEYA-------KALKDGP---HKGGVAAVVDDRAYAELFLSTR---CEFSI 764
R + N E +A + + D G + A + D A +++ R C+
Sbjct: 559 ERNIRNNYAEMHAYMGKFNQRGVDDALLSLKTGKLDAFIYDAAVLN-YMAGRDEGCKLVT 617
Query: 765 VG--QVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ----- 817
+G +VF G+G A +DS + AIL+L +G+++ + WL C ++
Sbjct: 618 IGSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVM 676
Query: 818 GAKLDVDRL 826
++LD+D +
Sbjct: 677 SSQLDIDNM 685
Score = 93 (37.8 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 47/217 (21%), Positives = 87/217 (40%)
Query: 141 FVRTTQSDQYQMAAIAEIVDHYGWR--EVIAIYVD--DDHGRNGIAALGDTLAAKRCRIS 196
F + S + Q + + I++ Y W ++ Y D + + ++
Sbjct: 10 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSFVGWELEEV 69
Query: 197 FKAPLSVEATEDEITDLLVKVALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIAT 256
+S++ + +I + L K+ +S II+++ +F VA +G+ G GY WI
Sbjct: 70 LLLDMSLDDGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 126
Query: 257 SWLSTALDT-NSPFPSDVM----DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTPNG 311
S ++ DT S FP+ ++ D+ L R +++ + P
Sbjct: 127 SLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSFIPEPKS 186
Query: 312 YIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKD 348
N + Y + L IN F +G NLSFS+D
Sbjct: 187 SC-YNTHEKRIYQSNMLNRYLINVTF-EGRNLSFSED 221
>UNIPROTKB|F1MWI8 [details] [associations]
symbol:F1MWI8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0051205 "protein insertion into membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0051924
GO:GO:0030288 GO:GO:0051205 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:HLQLDWA
EMBL:DAAA02020240 EMBL:DAAA02020241 EMBL:DAAA02020242
IPI:IPI00691902 Ensembl:ENSBTAT00000036098 Uniprot:F1MWI8
Length = 1045
Score = 199 (75.1 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 85/345 (24%), Positives = 139/345 (40%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH-NNPSCTELVRLITAGVYDAAVGDIAIITN 551
G+CID+ P+ ++ G G + T LV + AG AV +I +
Sbjct: 483 GYCIDLLERLAEDAPFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 542
Query: 552 RTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMW-GVTAIFFLAVGAVVWILE 610
R+++ DFT P+ + L ++ R S AF+ P MW GV A L +++
Sbjct: 543 RSQVVDFTSPFFSTSLGIMVRARDTASPIGAFMWPLHWSMWLGVFAALHLTA---LFLTL 599
Query: 611 HRLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHK-EKTVSA------LGRXXXXXXXXXXX 661
+ F P+ R T+F +S + + +A +TVS+ GR
Sbjct: 600 YEWRSPFGLTPRGRNRDTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRLLMNLWAIFCL 659
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDS----LRSSNYPIGYQVNSFARNYL---VDELN 714
SSYTA+L +++ K + GI + G S A Y+ E+
Sbjct: 660 LVLSSYTANLAAVMVGDKTFEELSGIHDPKLFFNXQGFRFGTVWESSAEAYIKKSFPEMY 719
Query: 715 IDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTRCEFSIVGQVFTKN 772
R +P A D P + A + D++ E+ + C VG+ F
Sbjct: 720 SHVRRHSAPTTPHGVAMLTSDPPK---LNAFIMDKSLLDYEVSIDADCRLLTVGKPFVIE 776
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G PR+SPL ++S I + +G + +HDKW C +
Sbjct: 777 GYGIGLPRNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKR 821
>UNIPROTKB|E9PH24 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC022317 EMBL:AC093596 EMBL:AC093733
EMBL:AC096769 EMBL:AC104077 EMBL:AC105315 EMBL:AC105452
EMBL:AC112695 EMBL:AC115111 HGNC:HGNC:4576 EMBL:AC020699
EMBL:AC095059 EMBL:AC108158 EMBL:AC110800 EMBL:AC115537
IPI:IPI00963845 ProteinModelPortal:E9PH24 SMR:E9PH24
Ensembl:ENST00000510992 UCSC:uc011cdu.2 ArrayExpress:E9PH24
Bgee:E9PH24 Uniprot:E9PH24
Length = 912
Score = 198 (74.8 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 147/646 (22%), Positives = 248/646 (38%)
Query: 249 TGYVWIATSWLSTALDTNSPFPSDVMDDIQGVLTL--RTY-TPDSVLKRKFISRWR---N 302
T V W+ + N +++ G LT+ +T+ P ++ +R F R
Sbjct: 154 TNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISST 213
Query: 303 LTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDIQGHLRLDS 362
L D K P + Y YDTV LLA N+F K+ + + + LS I R +S
Sbjct: 214 LCDPKDPFAQ-NMEISNLYIYDTVLLLA---NAFHKKLEDRKWHSMASLSCI----RKNS 265
Query: 363 LRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINV-----IGTGYRRIGYW 417
+ + GG + ++I + ++G G F +G N +EI+ +G G R++G W
Sbjct: 266 -KPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCW 324
Query: 418 SNYSGLSVVRPETLYSKPPNRSSSNQRLYSVIWPGQTT-QKPRGWVFPNNGRHLRIGVPN 476
+ +GL+ +L K + +N R V+ T ++P V N +G P
Sbjct: 325 NPVTGLN----GSLTDK---KLENNMR--GVVLRVVTVLEEPFVMVSENV-----LGKPK 370
Query: 477 RVSFREFVSVKGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTELV-RLIT 535
+ + GF +++ A + Y P + DG N ELV +
Sbjct: 371 KYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQE-----DGTWNGLVGELVFKRAD 423
Query: 536 AGVYDAAVGDIA--IITNRTKMADFTQPYI----ESGLVVVAPVRKLDSNAWAFLSPFTP 589
G+ + ++ T+ D++ + E + + A + D + WA ++
Sbjct: 424 IGISALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIA---- 479
Query: 590 MMWGVTAIFFLAVGAVVWILEHRLNDEFRGPPKRQVVTIFWFSFSTMFFAHKEKTVSALG 649
G + L V + W+ RL + + WF + + E + L
Sbjct: 480 ---GTVLLVGLLVYLLNWLNPPRL--QMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLA 534
Query: 650 -RXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIG-------YQ 700
R SSYTA+L + LT+ ++ S I+ + L + + P G Y+
Sbjct: 535 TRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYE 594
Query: 701 ------VNSFARNYLVDEL--NIDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA 752
+N F R+ + ++ I+ S N E A K K G A V D A
Sbjct: 595 HVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKV---KYGNYAFVWDAAVL 651
Query: 753 ELFL--STRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL 810
E C F +G G+G A SP S IL+L +NGD+ + KW
Sbjct: 652 EYVAINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWP 711
Query: 811 RSA-C---SSQGAKLDVDRLQLKSFSXXXXXXXXXXXXXXFIYLMQ 852
++ C SS K L +KSF+ FI +++
Sbjct: 712 KNGQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLE 757
>WB|WBGene00003774 [details] [associations]
symbol:nmr-1 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043059 "regulation of forward locomotion"
evidence=IMP] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0045202 "synapse" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0043005 GO:GO:0045202
GO:GO:0007626 GO:GO:0030288 InterPro:IPR001828 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 EMBL:FO081043 GO:GO:0005234
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208 OMA:WLEMLSH
HSSP:Q05586 GO:GO:0043059 EMBL:AF318613 PIR:T15967
RefSeq:NP_495033.2 UniGene:Cel.9184 ProteinModelPortal:G5EGQ9
SMR:G5EGQ9 EnsemblMetazoa:F07F6.6.1 EnsemblMetazoa:F07F6.6.2
GeneID:173929 KEGG:cel:CELE_F07F6.6 CTD:173929 WormBase:F07F6.6
NextBio:881705 Uniprot:G5EGQ9
Length = 1025
Score = 148 (57.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 39/154 (25%), Positives = 75/154 (48%)
Query: 665 SSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQVNSFARNYLVDELNIDESRL 720
+SYTA+L + L + + + G+ R S+N+ G +NS Y + +++ S +
Sbjct: 666 ASYTANLAAFLVLDQPEKGLTGVTDPRLRNPSANFSFGTVLNSNVYQYF--KRHVELSSM 723
Query: 721 VPLNSPEEYAKALKDGPHK---GGVAAVVDDRAYAELFLSTRCEFSIVGQVFTKNGWGFA 777
P +A + H G + A + D E + CE G +F ++ +G
Sbjct: 724 FRKMEPHNVRRA-SEAVHSLLNGSLDAFIWDSTRLEFEAARHCELRTRGSLFGRSAYGIG 782
Query: 778 FPRDSPLAVDISTAILKLSENGDLQRIHDKWLLR 811
++SP I++AIL++SE+G ++++ KW+ R
Sbjct: 783 LQKNSPWTPHITSAILRMSESGVMEKLDQKWIDR 816
Score = 103 (41.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 540 DAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMWGVTAIFF 599
D A+G I I R ++ DFT+P++ G+ ++ DS +FL P +W I
Sbjct: 517 DMAIGGITINPERERIVDFTEPWLYHGIRILEKNIPRDSPMQSFLQPLQSSLWTALFISV 576
Query: 600 LAVGAVVWILEHR 612
+ VG ++ L+ +
Sbjct: 577 ILVGLAIYCLDFK 589
Score = 46 (21.3 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 13/59 (22%), Positives = 26/59 (44%)
Query: 526 SCTELVRLITAGVYDAAVGDIAIITNRTKMADFTQPYIESGLVVVAPVRKLDSNAWAFL 584
S + + L+T+ Y + + ++ + A+F++ I V P L A+ FL
Sbjct: 104 SSSRFIDLVTSSAYTLSFYKLPVVGVMVRDAEFSKKNIYP--TFVRPTAPLSDEAFVFL 160
>RGD|621705 [details] [associations]
symbol:Grin3b "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3B" species:10116 "Rattus norvegicus"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030594 "neurotransmitter receptor
activity" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=IDA] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051205 "protein insertion into membrane" evidence=ISO]
[GO:0051924 "regulation of calcium ion transport" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 RGD:621705 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 GO:GO:0030288 GO:GO:0005261 GO:GO:0051205
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 OrthoDB:EOG480HW2 CTD:116444 KO:K05214
EMBL:AF440691 IPI:IPI00207177 RefSeq:NP_579842.2 UniGene:Rn.162906
PDB:2RCA PDB:2RCB PDBsum:2RCA PDBsum:2RCB ProteinModelPortal:Q8VHN2
SMR:Q8VHN2 STRING:Q8VHN2 PRIDE:Q8VHN2 GeneID:170796 KEGG:rno:170796
UCSC:RGD:621705 BindingDB:Q8VHN2 ChEMBL:CHEMBL282
EvolutionaryTrace:Q8VHN2 NextBio:621215 ArrayExpress:Q8VHN2
Genevestigator:Q8VHN2 GermOnline:ENSRNOG00000012562 Uniprot:Q8VHN2
Length = 1002
Score = 197 (74.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 84/345 (24%), Positives = 143/345 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH-NNPSCTELVRLITAGVYDAAVGDIAIITN 551
G+CID+ L + ++ G G + T LV + AG AV +I +
Sbjct: 478 GYCIDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 552 RTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMW-GVTAIFFLAVGAVVWILE 610
R+++ DFT P+ + L ++ R S AF+ P MW GV A L +++
Sbjct: 538 RSQVVDFTSPFFSTSLGIMVRTRDTASPIGAFMWPLHWSMWVGVFAALHLTA---LFLTL 594
Query: 611 HRLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHK-EKTVSA------LGRXXXXXXXXXXX 661
+ + P+ R T+F +S + + +A +TVS+ GR
Sbjct: 595 YEWRSPYGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCL 654
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQVNSFARNYL---VDELN 714
SSYTA+L +++ K + GI + S + G S A Y+ E++
Sbjct: 655 LVLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEAYIKASFPEMH 714
Query: 715 IDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTRCEFSIVGQVFTKN 772
R +P A D P + A + D++ E+ + C+ VG+ F
Sbjct: 715 AHMRRHSAPTTPHGVAMLTSDPPK---LNAFIMDKSLLDYEVSIDADCKLLTVGKPFAIE 771
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P++SPL ++S I + +G + +HDKW C +
Sbjct: 772 GYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKR 816
>UNIPROTKB|Q8VHN2 [details] [associations]
symbol:Grin3b "Glutamate receptor ionotropic, NMDA 3B"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 RGD:621705 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 GO:GO:0030288 GO:GO:0005261 GO:GO:0051205
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 OrthoDB:EOG480HW2 CTD:116444 KO:K05214
EMBL:AF440691 IPI:IPI00207177 RefSeq:NP_579842.2 UniGene:Rn.162906
PDB:2RCA PDB:2RCB PDBsum:2RCA PDBsum:2RCB ProteinModelPortal:Q8VHN2
SMR:Q8VHN2 STRING:Q8VHN2 PRIDE:Q8VHN2 GeneID:170796 KEGG:rno:170796
UCSC:RGD:621705 BindingDB:Q8VHN2 ChEMBL:CHEMBL282
EvolutionaryTrace:Q8VHN2 NextBio:621215 ArrayExpress:Q8VHN2
Genevestigator:Q8VHN2 GermOnline:ENSRNOG00000012562 Uniprot:Q8VHN2
Length = 1002
Score = 197 (74.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 84/345 (24%), Positives = 143/345 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH-NNPSCTELVRLITAGVYDAAVGDIAIITN 551
G+CID+ L + ++ G G + T LV + AG AV +I +
Sbjct: 478 GYCIDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 552 RTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMW-GVTAIFFLAVGAVVWILE 610
R+++ DFT P+ + L ++ R S AF+ P MW GV A L +++
Sbjct: 538 RSQVVDFTSPFFSTSLGIMVRTRDTASPIGAFMWPLHWSMWVGVFAALHLTA---LFLTL 594
Query: 611 HRLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHK-EKTVSA------LGRXXXXXXXXXXX 661
+ + P+ R T+F +S + + +A +TVS+ GR
Sbjct: 595 YEWRSPYGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCL 654
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQVNSFARNYL---VDELN 714
SSYTA+L +++ K + GI + S + G S A Y+ E++
Sbjct: 655 LVLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEAYIKASFPEMH 714
Query: 715 IDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTRCEFSIVGQVFTKN 772
R +P A D P + A + D++ E+ + C+ VG+ F
Sbjct: 715 AHMRRHSAPTTPHGVAMLTSDPPK---LNAFIMDKSLLDYEVSIDADCKLLTVGKPFAIE 771
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P++SPL ++S I + +G + +HDKW C +
Sbjct: 772 GYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKR 816
>MGI|MGI:2150393 [details] [associations]
symbol:Grin3b "glutamate receptor, ionotropic, NMDA3B"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=ISO] [GO:0005262
"calcium channel activity" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IMP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030594 "neurotransmitter
receptor activity" evidence=ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA;ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=IMP;IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051205
"protein insertion into membrane" evidence=IMP] [GO:0051924
"regulation of calcium ion transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:2150393 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051924
GO:GO:0030288 GO:GO:0005261 GO:GO:0051205 GO:GO:0070588
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 GeneTree:ENSGT00700000104113 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 CTD:116444 KO:K05214
OMA:HLQLDWA EMBL:AF396649 EMBL:AY062435 EMBL:AF373861
IPI:IPI00131433 RefSeq:NP_569722.1 UniGene:Mm.391566
ProteinModelPortal:Q91ZU9 SMR:Q91ZU9 STRING:Q91ZU9
PhosphoSite:Q91ZU9 PRIDE:Q91ZU9 DNASU:170483
Ensembl:ENSMUST00000045085 GeneID:170483 KEGG:mmu:170483
UCSC:uc007gau.1 InParanoid:Q91ZU9 BindingDB:Q91ZU9
ChEMBL:CHEMBL2557 NextBio:370111 Bgee:Q91ZU9 CleanEx:MM_GRIN3B
Genevestigator:Q91ZU9 GermOnline:ENSMUSG00000035745 Uniprot:Q91ZU9
Length = 1003
Score = 197 (74.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 84/345 (24%), Positives = 143/345 (41%)
Query: 494 GFCIDVFTAAINLLPYAVPYKLIPFGD-GH-NNPSCTELVRLITAGVYDAAVGDIAIITN 551
G+CID+ L + ++ G G + T LV + AG AV +I +
Sbjct: 478 GYCIDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 552 RTKMADFTQPYIESGLVVVAPVRKLDSNAWAFLSPFTPMMW-GVTAIFFLAVGAVVWILE 610
R+++ DFT P+ + L ++ R S AF+ P MW GV A L +++
Sbjct: 538 RSQVVDFTSPFFSTSLGIMVRTRDTASPIGAFMWPLHWSMWVGVFAALHLTA---LFLTL 594
Query: 611 HRLNDEFRGPPK-RQVVTIFWFSFS-TMFFAHK-EKTVSA------LGRXXXXXXXXXXX 661
+ + P+ R T+F +S + + +A +TVS+ GR
Sbjct: 595 YEWRSPYGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCL 654
Query: 662 XXNSSYTASLTSILTVQKLSSPIKGIDSLR----SSNYPIGYQVNSFARNYL---VDELN 714
SSYTA+L +++ K + GI + S + G S A Y+ E++
Sbjct: 655 LVLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEAYIKASFPEMH 714
Query: 715 IDESRLVPLNSPEEYAKALKDGPHKGGVAAVVDDRAYA--ELFLSTRCEFSIVGQVFTKN 772
R +P A D P + A + D++ E+ + C+ VG+ F
Sbjct: 715 AHMRRHSAPTTPHGVAMLTSDPPK---LNAFIMDKSLLDYEVSIDADCKLLTVGKPFAIE 771
Query: 773 GWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLLRSACSSQ 817
G+G P++SPL ++S I + +G + +HDKW C +
Sbjct: 772 GYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKR 816
>UNIPROTKB|Q7RTX1 [details] [associations]
symbol:TAS1R1 "Taste receptor type 1 member 1" species:9606
"Homo sapiens" [GO:0050917 "sensory perception of umami taste"
evidence=IDA] [GO:0008527 "taste receptor activity" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=IC] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0050912 "detection of chemical stimulus
involved in sensory perception of taste" evidence=IDA]
InterPro:IPR000337 InterPro:IPR011500 InterPro:IPR017978
InterPro:IPR017979 Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248
PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 Reactome:REACT_111102
GO:GO:0046982 InterPro:IPR001828 GO:GO:0008527 GO:GO:0050917
EMBL:AL591866 EMBL:AB065618 EMBL:BC136515 EMBL:BC136516
EMBL:AF387617 EMBL:AF387618 EMBL:AF387619 EMBL:AF387620
EMBL:BK000153 IPI:IPI00220275 IPI:IPI00291392 IPI:IPI00332575
IPI:IPI00514989 RefSeq:NP_619642.2 RefSeq:NP_803884.1
UniGene:Hs.124574 ProteinModelPortal:Q7RTX1 SMR:Q7RTX1
STRING:Q7RTX1 PhosphoSite:Q7RTX1 DMDM:57013075 PaxDb:Q7RTX1
PRIDE:Q7RTX1 Ensembl:ENST00000333172 Ensembl:ENST00000351136
GeneID:80835 KEGG:hsa:80835 UCSC:uc001ant.3 UCSC:uc001anu.3
UCSC:uc021ofp.1 CTD:80835 GeneCards:GC01P006615 HGNC:HGNC:14448
HPA:HPA034580 MIM:606225 neXtProt:NX_Q7RTX1 PharmGKB:PA37882
eggNOG:NOG248202 HOVERGEN:HBG108601 InParanoid:Q7RTX1 KO:K04624
OMA:YGQLGVQ OrthoDB:EOG4NKBTW ChiTaRS:TAS1R1 GenomeRNAi:80835
NextBio:71274 ArrayExpress:Q7RTX1 Bgee:Q7RTX1 Genevestigator:Q7RTX1
GermOnline:ENSG00000173662 Uniprot:Q7RTX1
Length = 841
Score = 196 (74.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 55/215 (25%), Positives = 102/215 (47%)
Query: 58 DVNSDPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQTVAIIGPQDAVTSHVVSHVAN 117
DV SD + T L + +H + LH +A+IGP + + + +
Sbjct: 104 DVCSDSANVYATLRVLSLPGQHHIELQG--DLLHYSP-TVLAVIGPDSTNRAATTAALLS 160
Query: 118 ELQVPLLSFSATDPTLS-SLQFPYFVRTTQSDQYQMAAIAEIVDHYGWREVIAIYVDDDH 176
VP++S++A+ TLS Q+P F+RT +D+YQ+ + ++ +GW + + DD+
Sbjct: 161 PFLVPMISYAASSETLSVKRQYPSFLRTIPNDKYQVETMVLLLQKFGWTWISLVGSSDDY 220
Query: 177 GRNGIAALGDTLAAKRCRISFK--APLSVEATEDEITDLLVKVALTESRIIVVHTHYNRG 234
G+ G+ AL + + I+FK P S + ++ + L+ +A + ++VV +
Sbjct: 221 GQLGVQALENQATGQGICIAFKDIMPFSAQVGDERMQCLMRHLAQAGATVVVVFSSRQLA 280
Query: 235 PVVFHVAQYLGMLGTGYVWIAT-SWLSTALDTNSP 268
V F + TG VW+A+ +W + T P
Sbjct: 281 RVFFESVVLTNL--TGKVWVASEAWALSRHITGVP 313
>UNIPROTKB|Q98UC6 [details] [associations]
symbol:mGluR5a "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR000162
InterPro:IPR000202 InterPro:IPR000337 InterPro:IPR011500
InterPro:IPR017978 InterPro:IPR017979 Pfam:PF00003 Pfam:PF07562
PRINTS:PR00248 PRINTS:PR00593 PRINTS:PR01055 PROSITE:PS00979
PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 InterPro:IPR001828
HOVERGEN:HBG107965 InterPro:IPR019588 Pfam:PF10606
GeneTree:ENSGT00660000095505 HOGENOM:HOG000218636 HSSP:P23385
EMBL:AADN02004808 EMBL:AADN02004809 EMBL:AADN02004810
EMBL:AADN02004811 EMBL:AADN02004812 EMBL:AADN02004813
EMBL:AADN02004814 UniGene:Gga.73 EMBL:AF227201 IPI:IPI00587422
SMR:Q98UC6 STRING:Q98UC6 Ensembl:ENSGALT00000027867 Uniprot:Q98UC6
Length = 1156
Score = 159 (61.0 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 47/195 (24%), Positives = 87/195 (44%)
Query: 98 VAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQ-FPYFVRTTQSDQYQMAAIA 156
V +IGP + + V ++ +P +++SAT LS F YF+R SD Q A+
Sbjct: 150 VGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAMV 209
Query: 157 EIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVK 216
+IV Y W V A++ + ++G +G+ A D A + I+ + A E LL K
Sbjct: 210 DIVKRYNWTYVSAVHTEGNYGESGMEAFKDMAAKEGICIAHSYKIYSNAGEQSFDKLLRK 269
Query: 217 VA--LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVM 274
+ L ++R++ + + LG+ G + + W + D + + +
Sbjct: 270 LRSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGW-ADRYDVTDGYQREAV 328
Query: 275 DDIQGVLTLRTYTPD 289
G +T++ +PD
Sbjct: 329 ----GGITIKLQSPD 339
Score = 81 (33.6 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRL-DSLRIFNGGNLLRDSILQANMTGTAGPA-RF 390
IN+ + L + +LS G++ L D+++ +G LL +S+++ N TG +G F
Sbjct: 407 INAIYSMAYGLH---NMQLSLCPGYVGLCDAMKPIDGRKLL-ESLMKTNFTGVSGDMILF 462
Query: 391 NSHGDLINPA-YEIINVIGTG-----YRRIGYWSN 419
+ +GD +P YEI+N G Y +G W N
Sbjct: 463 DENGD--SPGRYEIMNFKKMGKDYFDYINVGSWDN 495
Score = 56 (24.8 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 51 AIKAAVDDVNSDPTTLGGTKLKLQMQD-CNHSGFLALAEALHLMEGQTVA 99
A+ +D +N DPT L L +++D C HS +AL +++ + ++
Sbjct: 77 AMLHTLDRINLDPTLLPNITLGCEIRDSCWHSA-VALEQSIEFIRDSLIS 125
Score = 46 (21.3 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 430 TLYSKPPNRSSSNQ 443
T S+PP RSSS+Q
Sbjct: 990 TFQSEPPQRSSSSQ 1003
Score = 37 (18.1 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 859 RHYPGDTESNGGSSRSARL 877
R + GD +S+ +SRS+ L
Sbjct: 850 RMHVGDGKSSSAASRSSSL 868
Score = 37 (18.1 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 524 NPSCTELVRLITAGVYDAAVG 544
N +CT + L T V D+ +G
Sbjct: 384 NKTCTSQMTLRTQHVQDSKMG 404
>UNIPROTKB|Q98UC5 [details] [associations]
symbol:mGluR5b "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR000162
InterPro:IPR000202 InterPro:IPR000337 InterPro:IPR011500
InterPro:IPR017978 InterPro:IPR017979 Pfam:PF00003 Pfam:PF07562
PRINTS:PR00248 PRINTS:PR00593 PRINTS:PR01055 PROSITE:PS00979
PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 InterPro:IPR001828
HOVERGEN:HBG107965 InterPro:IPR019588 Pfam:PF10606
GeneTree:ENSGT00660000095505 HOGENOM:HOG000218636 HSSP:P23385
EMBL:AADN02004808 EMBL:AADN02004809 EMBL:AADN02004810
EMBL:AADN02004811 EMBL:AADN02004812 EMBL:AADN02004813
EMBL:AADN02004814 UniGene:Gga.73 EMBL:AF227202 IPI:IPI00585032
SMR:Q98UC5 STRING:Q98UC5 Ensembl:ENSGALT00000027868 Uniprot:Q98UC5
Length = 1188
Score = 159 (61.0 bits), Expect = 1.7e-11, Sum P(4) = 1.7e-11
Identities = 47/195 (24%), Positives = 87/195 (44%)
Query: 98 VAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQ-FPYFVRTTQSDQYQMAAIA 156
V +IGP + + V ++ +P +++SAT LS F YF+R SD Q A+
Sbjct: 150 VGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAMV 209
Query: 157 EIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVK 216
+IV Y W V A++ + ++G +G+ A D A + I+ + A E LL K
Sbjct: 210 DIVKRYNWTYVSAVHTEGNYGESGMEAFKDMAAKEGICIAHSYKIYSNAGEQSFDKLLRK 269
Query: 217 VA--LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVM 274
+ L ++R++ + + LG+ G + + W + D + + +
Sbjct: 270 LRSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGW-ADRYDVTDGYQREAV 328
Query: 275 DDIQGVLTLRTYTPD 289
G +T++ +PD
Sbjct: 329 ----GGITIKLQSPD 339
Score = 81 (33.6 bits), Expect = 1.7e-11, Sum P(4) = 1.7e-11
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRL-DSLRIFNGGNLLRDSILQANMTGTAGPA-RF 390
IN+ + L + +LS G++ L D+++ +G LL +S+++ N TG +G F
Sbjct: 407 INAIYSMAYGLH---NMQLSLCPGYVGLCDAMKPIDGRKLL-ESLMKTNFTGVSGDMILF 462
Query: 391 NSHGDLINPA-YEIINVIGTG-----YRRIGYWSN 419
+ +GD +P YEI+N G Y +G W N
Sbjct: 463 DENGD--SPGRYEIMNFKKMGKDYFDYINVGSWDN 495
Score = 56 (24.8 bits), Expect = 1.7e-11, Sum P(4) = 1.7e-11
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 51 AIKAAVDDVNSDPTTLGGTKLKLQMQD-CNHSGFLALAEALHLMEGQTVA 99
A+ +D +N DPT L L +++D C HS +AL +++ + ++
Sbjct: 77 AMLHTLDRINLDPTLLPNITLGCEIRDSCWHSA-VALEQSIEFIRDSLIS 125
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(4) = 1.7e-11
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 430 TLYSKPPNRSSSNQ 443
T S+PP RSSS+Q
Sbjct: 1022 TFQSEPPQRSSSSQ 1035
Score = 37 (18.1 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 859 RHYPGDTESNGGSSRSARL 877
R + GD +S+ +SRS+ L
Sbjct: 850 RMHVGDGKSSSAASRSSSL 868
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 524 NPSCTELVRLITAGVYDAAVG 544
N +CT + L T V D+ +G
Sbjct: 384 NKTCTSQMTLRTQHVQDSKMG 404
>UNIPROTKB|Q6J164 [details] [associations]
symbol:GRM5 "Metabotropic glutamate receptor 5 splice
variant d" species:9606 "Homo sapiens" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR000162 InterPro:IPR000202 InterPro:IPR000337
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR00593
PRINTS:PR01055 PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981
PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 InterPro:IPR001828 HOVERGEN:HBG107965
InterPro:IPR019588 Pfam:PF10606 HOGENOM:HOG000218636
UniGene:Hs.147361 HGNC:HGNC:4597 ChiTaRS:GRM5 EMBL:AP000626
EMBL:AP001482 EMBL:AP001828 EMBL:AP003120 EMBL:AP006214
EMBL:AP006215 EMBL:AY608336 IPI:IPI00797769 SMR:Q6J164
STRING:Q6J164 Ensembl:ENST00000393297 Uniprot:Q6J164
Length = 942
Score = 161 (61.7 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 98 VAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQ-FPYFVRTTQSDQYQMAAIA 156
V +IGP + + V ++ +P +++SAT LS F YF+R SD Q A+
Sbjct: 144 VGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAMV 203
Query: 157 EIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVK 216
+IV Y W V A++ + ++G +G+ A D A + I+ + A E LL K
Sbjct: 204 DIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKEGICIAHSYKIYSNAGEQSFDKLLKK 263
Query: 217 VA--LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVM 274
+ L ++R++ + + LG+ G + + W + D + + +
Sbjct: 264 LTSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGW-ADRYDVTDGYQREAV 322
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTP 309
G +T++ +PD + + R T+ + P
Sbjct: 323 ----GGITIKLQSPDVKWFDDYYLKLRPETNHRNP 353
Score = 81 (33.6 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 32/113 (28%), Positives = 56/113 (49%)
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRL-DSLRIFNGGNLLRDSILQANMTGTAGPA-RF 390
IN+ + L + ++S G+ L D+++ +G LL +S+++ N TG +G F
Sbjct: 401 INAIYSMAYGLH---NMQMSLCPGYAGLCDAMKPIDGRKLL-ESLMKTNFTGVSGDTILF 456
Query: 391 NSHGDLINPA-YEIINVIGTG-----YRRIGYWSNYSGLSVVRPETLYSKPPN 437
+ +GD +P YEI+N G Y +G W N G + + ++SK N
Sbjct: 457 DENGD--SPGRYEIMNFKEMGKDYFDYINVGSWDN--GELKMDDDEVWSKKSN 505
Score = 58 (25.5 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 51 AIKAAVDDVNSDPTTLGGTKLKLQMQD-CNHSGFLALAEALHLMEGQTVA 99
A+ ++ +NSDPT L L +++D C HS +AL +++ + ++
Sbjct: 71 AMLHTLERINSDPTLLPNITLGCEIRDSCWHSA-VALEQSIEFIRDSLIS 119
Score = 37 (18.1 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 859 RHYPGDTESNGGSSRSARL 877
R + GD +S+ +SRS+ L
Sbjct: 844 RMHVGDGKSSSAASRSSSL 862
>ZFIN|ZDB-GENE-060503-724 [details] [associations]
symbol:olfcj1 "olfactory receptor C family, j1"
species:7955 "Danio rerio" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000337 InterPro:IPR004073
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR01535
PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
ZFIN:ZDB-GENE-060503-724 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
InterPro:IPR001828 HOGENOM:HOG000232092 HOVERGEN:HBG052876
GeneTree:ENSGT00690000101821 EMBL:AL844192 IPI:IPI00758773
RefSeq:NP_001103761.1 UniGene:Dr.143185 Ensembl:ENSDART00000004952
GeneID:100005028 KEGG:dre:100005028 eggNOG:NOG254675 OMA:LANINTR
OrthoDB:EOG4RNBB7 NextBio:20786492 Uniprot:A8DZ71
Length = 857
Score = 195 (73.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 63/225 (28%), Positives = 112/225 (49%)
Query: 55 AVDDVNSDPTTLGGTKLKLQMQDCNHSGFLALAEALHLMEGQ------------TVAIIG 102
A++++N+ L G L ++ D S L++ +L LM GQ A+IG
Sbjct: 84 AIEEINNRTDLLPGFILGYRIYDSCPSIPLSVGASLTLMNGQMETKKSCASPSAVQAVIG 143
Query: 103 PQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQ-FPYFVRTTQSDQYQMAAIAEIVDH 161
+ ++ ++ ++P+LS SAT LS+ Q +P F RT SD YQ A+ ++V +
Sbjct: 144 ETTSTSTIDIARTIGPFKIPVLSHSATCACLSNRQQYPSFFRTIPSDYYQSRALVKLVTY 203
Query: 162 YGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATED-----EITDLLVK 216
+GW+ V A+ D+G NG+A + AA++ I + +S+ T E+TD++ K
Sbjct: 204 FGWKWVGAVRSMGDYGNNGMATFLE--AAEKEGICVEYSVSIYRTNSREKILEVTDIIKK 261
Query: 217 VALTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATS-WLS 260
+ S++IV N ++ Y + TGY W+ + W++
Sbjct: 262 ---STSKVIVAFADGNDLDMLIKELYYQNV--TGYQWVGSEGWIT 301
>UNIPROTKB|F1NWG3 [details] [associations]
symbol:GRM5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007612 "learning" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0043005 "neuron projection"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] InterPro:IPR000162
InterPro:IPR000202 InterPro:IPR000337 InterPro:IPR011500
InterPro:IPR017978 InterPro:IPR017979 Pfam:PF00003 Pfam:PF07562
PRINTS:PR00248 PRINTS:PR00593 PRINTS:PR01055 PROSITE:PS00979
PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0004930
GO:GO:0048169 InterPro:IPR001828 InterPro:IPR019588 Pfam:PF10606
GeneTree:ENSGT00660000095505 OMA:LRPETNH EMBL:AADN02004808
EMBL:AADN02004809 EMBL:AADN02004810 EMBL:AADN02004811
EMBL:AADN02004812 EMBL:AADN02004813 EMBL:AADN02004814
IPI:IPI00590919 Ensembl:ENSGALT00000027866 ArrayExpress:F1NWG3
Uniprot:F1NWG3
Length = 1242
Score = 159 (61.0 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 47/195 (24%), Positives = 87/195 (44%)
Query: 98 VAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQ-FPYFVRTTQSDQYQMAAIA 156
V +IGP + + V ++ +P +++SAT LS F YF+R SD Q A+
Sbjct: 150 VGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAMV 209
Query: 157 EIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVK 216
+IV Y W V A++ + ++G +G+ A D A + I+ + A E LL K
Sbjct: 210 DIVKRYNWTYVSAVHTEGNYGESGMEAFKDMAAKEGICIAHSYKIYSNAGEQSFDKLLRK 269
Query: 217 VA--LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVM 274
+ L ++R++ + + LG+ G + + W + D + + +
Sbjct: 270 LRSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGW-ADRYDVTDGYQREAV 328
Query: 275 DDIQGVLTLRTYTPD 289
G +T++ +PD
Sbjct: 329 ----GGITIKLQSPD 339
Score = 81 (33.6 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRL-DSLRIFNGGNLLRDSILQANMTGTAGPA-RF 390
IN+ + L + +LS G++ L D+++ +G LL +S+++ N TG +G F
Sbjct: 407 INAIYSMAYGLH---NMQLSLCPGYVGLCDAMKPIDGRKLL-ESLMKTNFTGVSGDMILF 462
Query: 391 NSHGDLINPA-YEIINVIGTG-----YRRIGYWSN 419
+ +GD +P YEI+N G Y +G W N
Sbjct: 463 DENGD--SPGRYEIMNFKKMGKDYFDYINVGSWDN 495
Score = 56 (24.8 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 51 AIKAAVDDVNSDPTTLGGTKLKLQMQD-CNHSGFLALAEALHLMEGQTVA 99
A+ +D +N DPT L L +++D C HS +AL +++ + ++
Sbjct: 77 AMLHTLDRINLDPTLLPNITLGCEIRDSCWHSA-VALEQSIEFIRDSLIS 125
Score = 46 (21.3 bits), Expect = 2.1e-11, Sum P(4) = 2.1e-11
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 430 TLYSKPPNRSSSNQ 443
T S+PP RSSS+Q
Sbjct: 1076 TFQSEPPQRSSSSQ 1089
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(4) = 1.6e-10
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 859 RHYPGDTESNGGSSRSARL 877
R + GD +S+ +SRS+ L
Sbjct: 850 RMHVGDGKSSSAASRSSSL 868
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(4) = 3.3e-06
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 524 NPSCTELVRLITAGVYDAAVG 544
N +CT + L T V D+ +G
Sbjct: 384 NKTCTSQMTLRTQHVQDSKMG 404
>UNIPROTKB|G3N1N5 [details] [associations]
symbol:100335496 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:DAAA02039769 EMBL:DAAA02039770
Ensembl:ENSBTAT00000063398 Uniprot:G3N1N5
Length = 660
Score = 142 (55.0 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 58/244 (23%), Positives = 99/244 (40%)
Query: 593 GVTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTV 645
GV+ + FL W E D GP P + + WFS + +
Sbjct: 315 GVSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISP 373
Query: 646 SAL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL-RSSNYPIGYQVNS 703
+L GR SSYTA+L + LTV+++ SPI+ + L + + G +
Sbjct: 374 RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 433
Query: 704 FARNYLV-DELNIDESRLVPLNS--PEEYAKALKDG-----PHKGGVAAVVDDRAYAELF 755
+ + ++ + E + S P + + +G KG A +++ +
Sbjct: 434 STKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIE 493
Query: 756 LSTRCEFSIVGQVFTKNGWGFAFPRDSPLAVDISTAILKLSENGDLQRIHDKWLL-RSAC 814
C+ VG G+G A P+ S L ++ A+LKL+E G L ++ +KW + C
Sbjct: 494 QRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGEC 553
Query: 815 SSQG 818
S G
Sbjct: 554 GSGG 557
Score = 137 (53.3 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 50/225 (22%), Positives = 95/225 (42%)
Query: 487 KGSEMTSGFCIDVFTAAINLLPYAVPYKLIPFGDGHNNPSCTEL----VRLITAGVYDAA 542
+G++ G+C+D+ + + ++P G + T++ V + G + A
Sbjct: 196 EGNDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIA 255
Query: 543 VGDIAIITNRTKMADFTQPYIESGL-VVVAPVRKLDSNAWAFLSPFTPMMW--------G 593
+ + I R ++ DF++P++ G+ +++ +K ++FL P +W G
Sbjct: 256 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 315
Query: 594 VTAIFFLA--VGAVVWILEHRLNDEFRGP---PKRQ--VVTIFWFSFSTMFFAHKEKTVS 646
V+ + FL W E D GP P + + WFS + +
Sbjct: 316 VSVVLFLVSRFSPYEWHTEEP-EDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPR 374
Query: 647 AL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQKLSSPIKGIDSL 690
+L GR SSYTA+L + LTV+++ SPI+ + L
Sbjct: 375 SLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 419
Score = 102 (41.0 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 27/133 (20%), Positives = 55/133 (41%)
Query: 295 KFISRWRNLTDAKTPNGYIGLNAYGFYAYDTVWLLARAINSFFKQGGNLSFSKDSRLSDI 354
K + RW+ L + P YD V ++A S +Q + S+ D
Sbjct: 32 KLMDRWKKLDQREYPGSETPPKYTSALTYDGVLVMAETFRSLRRQ--KIDISRRGNAGDC 89
Query: 355 QGHLRLDSLRIFNGGNLLRDSILQANMTGTAGPARFNSHGDLINPAYEIINVIGTGYRRI 414
+ + G + ++ Q + G G +F+ +G +N ++ + TG R++
Sbjct: 90 LANPAAP----WGQGIDMERTLKQVQIQGLTGNVQFDHYGRRVNYTMDVFELKSTGPRKV 145
Query: 415 GYWSNYSGLSVVR 427
GYW++ L +++
Sbjct: 146 GYWNDMDKLVLIQ 158
Score = 50 (22.7 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 147 SDQYQMAAI---AEIVDHYGWREVIAIYVDDDHG-RNGIAALGDTLAAK----RCRISFK 198
+D+Y+ + +EI H G + IAI D +G R+ + + + + + I+
Sbjct: 198 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAI- 256
Query: 199 APLSVEATEDEITD 212
APL++ +E+ D
Sbjct: 257 APLTITLVREEVID 270
>UNIPROTKB|E2RJI2 [details] [associations]
symbol:GRM5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA]
InterPro:IPR000162 InterPro:IPR000202 InterPro:IPR000337
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR00593
PRINTS:PR01055 PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981
PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 GO:GO:0004930 GO:GO:0007612 GO:GO:0007626
GO:GO:0048169 InterPro:IPR001828 InterPro:IPR019588 Pfam:PF10606
GeneTree:ENSGT00660000095505 EMBL:AAEX03012738 EMBL:AAEX03012739
ProteinModelPortal:E2RJI2 Ensembl:ENSCAFT00000007045 Uniprot:E2RJI2
Length = 1215
Score = 161 (61.7 bits), Expect = 2.3e-11, Sum P(4) = 2.3e-11
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 98 VAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQ-FPYFVRTTQSDQYQMAAIA 156
V +IGP + + V ++ +P +++SAT LS F YF+R SD Q A+
Sbjct: 144 VGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAMV 203
Query: 157 EIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVK 216
+IV Y W V A++ + ++G +G+ A D A + I+ + A E LL K
Sbjct: 204 DIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKEGICIAHSYKIYSNAGEQSFDKLLKK 263
Query: 217 VA--LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVM 274
+ L ++R++ + + LG+ G + + W + D + + +
Sbjct: 264 LRSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGW-ADRYDVTDGYQREAV 322
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTP 309
G +T++ +PD + + R T+ + P
Sbjct: 323 ----GGITIKLQSPDVKWFDDYYLKLRPETNLRNP 353
Score = 83 (34.3 bits), Expect = 2.3e-11, Sum P(4) = 2.3e-11
Identities = 33/113 (29%), Positives = 56/113 (49%)
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRL-DSLRIFNGGNLLRDSILQANMTGTAGPA-RF 390
IN+ + L + ++S G+ L D+++ +G LL DS+++ N TG +G F
Sbjct: 401 INAIYSMAYGLH---NMQMSLCPGYAGLCDAMKPIDGRKLL-DSLMKTNFTGVSGDMILF 456
Query: 391 NSHGDLINPA-YEIINVIGTG-----YRRIGYWSNYSGLSVVRPETLYSKPPN 437
+ +GD +P YEI+N G Y +G W N G + + ++SK N
Sbjct: 457 DENGD--SPGRYEIMNFKEMGKDYFDYINVGSWDN--GELKMDDDEVWSKKHN 505
Score = 58 (25.5 bits), Expect = 2.3e-11, Sum P(4) = 2.3e-11
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 51 AIKAAVDDVNSDPTTLGGTKLKLQMQD-CNHSGFLALAEALHLMEGQTVA 99
A+ ++ +NSDPT L L +++D C HS +AL +++ + ++
Sbjct: 71 AMLHTLERINSDPTLLPNITLGCEIRDSCWHSA-VALEQSIEFIRDSLIS 119
Score = 39 (18.8 bits), Expect = 2.3e-11, Sum P(4) = 2.3e-11
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 430 TLYSKPPNRSSSNQ 443
+L+S+P RSSS+Q
Sbjct: 1041 SLHSEPAARSSSSQ 1054
Score = 37 (18.1 bits), Expect = 3.7e-11, Sum P(4) = 3.7e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 859 RHYPGDTESNGGSSRSARL 877
R + GD +S+ +SRS+ L
Sbjct: 844 RMHVGDGKSSSAASRSSSL 862
>UNIPROTKB|J9JH96 [details] [associations]
symbol:GRM5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA]
InterPro:IPR000162 InterPro:IPR000202 InterPro:IPR000337
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR00593
PRINTS:PR01055 PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981
PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 InterPro:IPR001828 KO:K04604 InterPro:IPR019588
Pfam:PF10606 GeneTree:ENSGT00660000095505 CTD:2915 OMA:LRPETNH
EMBL:AAEX03012738 EMBL:AAEX03012739 RefSeq:XP_848683.1
Ensembl:ENSCAFT00000047674 GeneID:485146 KEGG:cfa:485146
Uniprot:J9JH96
Length = 1238
Score = 161 (61.7 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 50/215 (23%), Positives = 94/215 (43%)
Query: 98 VAIIGPQDAVTSHVVSHVANELQVPLLSFSATDPTLSSLQ-FPYFVRTTQSDQYQMAAIA 156
V +IGP + + V ++ +P +++SAT LS F YF+R SD Q A+
Sbjct: 144 VGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAMV 203
Query: 157 EIVDHYGWREVIAIYVDDDHGRNGIAALGDTLAAKRCRISFKAPLSVEATEDEITDLLVK 216
+IV Y W V A++ + ++G +G+ A D A + I+ + A E LL K
Sbjct: 204 DIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKEGICIAHSYKIYSNAGEQSFDKLLKK 263
Query: 217 VA--LTESRIIVVHTHYNRGPVVFHVAQYLGMLGTGYVWIATSWLSTALDTNSPFPSDVM 274
+ L ++R++ + + LG+ G + + W + D + + +
Sbjct: 264 LRSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFLLLGSDGW-ADRYDVTDGYQREAV 322
Query: 275 DDIQGVLTLRTYTPDSVLKRKFISRWRNLTDAKTP 309
G +T++ +PD + + R T+ + P
Sbjct: 323 ----GGITIKLQSPDVKWFDDYYLKLRPETNLRNP 353
Score = 83 (34.3 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 33/113 (29%), Positives = 56/113 (49%)
Query: 333 INSFFKQGGNLSFSKDSRLSDIQGHLRL-DSLRIFNGGNLLRDSILQANMTGTAGPA-RF 390
IN+ + L + ++S G+ L D+++ +G LL DS+++ N TG +G F
Sbjct: 401 INAIYSMAYGLH---NMQMSLCPGYAGLCDAMKPIDGRKLL-DSLMKTNFTGVSGDMILF 456
Query: 391 NSHGDLINPA-YEIINVIGTG-----YRRIGYWSNYSGLSVVRPETLYSKPPN 437
+ +GD +P YEI+N G Y +G W N G + + ++SK N
Sbjct: 457 DENGD--SPGRYEIMNFKEMGKDYFDYINVGSWDN--GELKMDDDEVWSKKHN 505
Score = 58 (25.5 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 51 AIKAAVDDVNSDPTTLGGTKLKLQMQD-CNHSGFLALAEALHLMEGQTVA 99
A+ ++ +NSDPT L L +++D C HS +AL +++ + ++
Sbjct: 71 AMLHTLERINSDPTLLPNITLGCEIRDSCWHSA-VALEQSIEFIRDSLIS 119
Score = 39 (18.8 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 430 TLYSKPPNRSSSNQ 443
+L+S+P RSSS+Q
Sbjct: 1053 SLHSEPAARSSSSQ 1066
Score = 37 (18.1 bits), Expect = 4.0e-11, Sum P(4) = 4.0e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 859 RHYPGDTESNGGSSRSARL 877
R + GD +S+ +SRS+ L
Sbjct: 844 RMHVGDGKSSSAASRSSSL 862
WARNING: HSPs involving 271 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 940 913 0.00089 122 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 521
No. of states in DFA: 634 (67 KB)
Total size of DFA: 437 KB (2208 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 70.76u 0.14s 70.90t Elapsed: 00:00:03
Total cpu time: 70.94u 0.14s 71.08t Elapsed: 00:00:03
Start: Sat May 11 12:41:40 2013 End: Sat May 11 12:41:43 2013
WARNINGS ISSUED: 2