BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002306
(938 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255541826|ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
gi|223549157|gb|EEF50646.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
Length = 936
Score = 1733 bits (4488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 823/936 (87%), Positives = 887/936 (94%), Gaps = 1/936 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
DE NKLPELKLDAKQA+GFLSF+KTLP+D RAVR FDRRDYYT+HGENATFIAKTYYHTT
Sbjct: 2 DEDNKLPELKLDAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTSHGENATFIAKTYYHTT 61
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TALRQLG+G D LSSVS+SKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL
Sbjct: 62 TALRQLGSGPDGLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 121
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+EDVLFANNEMQD+P + A+ PNFRENGC+IGLGYVDLTKR+LGLAEFLDDSHFTN+E
Sbjct: 122 GSFEDVLFANNEMQDSPAVAAVIPNFRENGCSIGLGYVDLTKRILGLAEFLDDSHFTNLE 181
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
SALVALGCKECLLP E+ KS EC+TL DALTRCGVMLTERKK EFKTRDLV+DL RLV+G
Sbjct: 182 SALVALGCKECLLPIESGKSIECRTLHDALTRCGVMLTERKKNEFKTRDLVEDLGRLVKG 241
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
S+EPVRDLVSGFE APGALGALLSYAELL+DESNYGNY IRKY+LDSYMRLDSAAMRALN
Sbjct: 242 SIEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYTIRKYNLDSYMRLDSAAMRALN 301
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEIN+RLD+VQAFV+DTA
Sbjct: 302 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAFVEDTA 361
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLRQHLKRISDIERL+HNLEKRRAGLQ IVKLYQSSIRLPYIR AL +Y+GQFSSLI
Sbjct: 362 LRQDLRQHLKRISDIERLVHNLEKRRAGLQHIVKLYQSSIRLPYIRGALDKYDGQFSSLI 421
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
KERYLDPLESLTDDDHLNKFIALVETSVDLDQL+NGEY+IS SYD LSALK+EQESLE
Sbjct: 422 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLDNGEYLISPSYDPALSALKDEQESLEC 481
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QIH+LHKQTA DLDLP DK LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG
Sbjct: 482 QIHNLHKQTAQDLDLPQDKGLKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 541
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGDQYQK++EEYKNCQKELVNRV+QTA TFSE+FKSLA +LS+LDVLLSF
Sbjct: 542 VKFTNTKLKKLGDQYQKIVEEYKNCQKELVNRVVQTAATFSEVFKSLAGLLSQLDVLLSF 601
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLA+SCPTPYTRPDI P DVG+IILEGSRHPCVEAQDWVNFIPNDCKLIRG+SWFQIIT
Sbjct: 602 ADLATSCPTPYTRPDITPSDVGNIILEGSRHPCVEAQDWVNFIPNDCKLIRGESWFQIIT 661
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVGVNILMAQVGSFVPCD+ASISVRDCIFARVGAGDCQLRGVSTFMQE
Sbjct: 662 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQE 721
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGATD+SLIIIDELGRGTSTYDGFGLAWAICEHLV+ I+APTLFATHFHELT
Sbjct: 722 MLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVIKAPTLFATHFHELT 781
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
LA E A E + KQ+ GVANYHVSAHIDS++RKLTMLYKVEPGACDQSFGIHVAEFANFP
Sbjct: 782 GLADEKA-EPHMKQIAGVANYHVSAHIDSSNRKLTMLYKVEPGACDQSFGIHVAEFANFP 840
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
ESVV LAREKAAELEDF+P+A++S+D +VGSKR R DP+D+SRGAARAH+FLKEFSD
Sbjct: 841 ESVVALAREKAAELEDFSPNAIVSNDTTEKVGSKRNRKCDPDDVSRGAARAHKFLKEFSD 900
Query: 903 MPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
+PLETMDLKEAL++V ++K+ LEKDA +C WL+QFF
Sbjct: 901 LPLETMDLKEALQQVSKLKEGLEKDAANCQWLKQFF 936
>gi|224118890|ref|XP_002317931.1| predicted protein [Populus trichocarpa]
gi|222858604|gb|EEE96151.1| predicted protein [Populus trichocarpa]
Length = 944
Score = 1675 bits (4338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/937 (84%), Positives = 874/937 (93%), Gaps = 1/937 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
+EQNKLPELKLDAKQA+GFLSF+KTLP+D RAVR FDRRDYYT H ENATFIAKTYYHTT
Sbjct: 8 EEQNKLPELKLDAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTVHAENATFIAKTYYHTT 67
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TALRQLG+GS+ LSSVS+SKNMFETIARDLLLERTDHTLELYEGSGSNW+LVKSGTPGNL
Sbjct: 68 TALRQLGSGSNGLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWKLVKSGTPGNL 127
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+EDVLFANN+MQD+PV+VAL NFRE GCT+GL YVDLTKRVLGLAEFLDDSHFTNVE
Sbjct: 128 GSFEDVLFANNDMQDSPVVVALLLNFREKGCTVGLSYVDLTKRVLGLAEFLDDSHFTNVE 187
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
SALVAL CKECLLP E+ KS++C+TL D LT+CGVMLTERKK EFKTRDLVQDL RLV+G
Sbjct: 188 SALVALSCKECLLPMESGKSNDCRTLHDVLTKCGVMLTERKKNEFKTRDLVQDLGRLVKG 247
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
+EPVRDLVSGFE APGALGALLSYAELL+DESNYGNY IRKY+LDSYMRLDSAA RALN
Sbjct: 248 PLEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYRIRKYNLDSYMRLDSAATRALN 307
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL+V+ IN+RLD+VQAFVDDT
Sbjct: 308 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLEVDAINSRLDLVQAFVDDTG 367
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLRQHLKRISDIERLMH +EK RAGL IVKLYQS IRLPYI+ AL++Y+GQFSSLI
Sbjct: 368 LRQDLRQHLKRISDIERLMHIVEKGRAGLHHIVKLYQSIIRLPYIKGALERYDGQFSSLI 427
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
KE+YL+ LE TDD+HLNKFIALVET+VDLDQL+NGEYMIS Y+ L ALK EQESLE
Sbjct: 428 KEKYLESLEVWTDDNHLNKFIALVETAVDLDQLDNGEYMISPGYEAALGALKAEQESLEH 487
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QIH+LHKQTASDLDLP+DK LKLDKGTQ+GHVFRITKKEEPKIRKKLTTQFIVLETRKDG
Sbjct: 488 QIHNLHKQTASDLDLPLDKGLKLDKGTQYGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 547
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGDQYQK++E YK+ QKELV+RV+Q TFSE+F+ L+ +LSE+DVLLSF
Sbjct: 548 VKFTNTKLKKLGDQYQKIVENYKSRQKELVSRVVQITATFSEVFEKLSGLLSEMDVLLSF 607
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLASSCPTPYTRPDI P DVGDIILEGSRHPCVEAQDWVNFIPNDCKL+RGKSWFQIIT
Sbjct: 608 ADLASSCPTPYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIIT 667
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQ+GVNILMAQVGSF+PCD+A+ISVRDCIFARVGAGDCQ+RGVSTFMQE
Sbjct: 668 GPNMGGKSTFIRQIGVNILMAQVGSFIPCDKATISVRDCIFARVGAGDCQMRGVSTFMQE 727
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV E++APTLFATHFHELT
Sbjct: 728 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVRELKAPTLFATHFHELT 787
Query: 783 ALAHENAN-EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
ALAH+ + E + KQ+VGVANYHVSAHIDS++ KLTMLYKVEPGACDQSFGIHVAEFANF
Sbjct: 788 ALAHQKPDQEPHAKQIVGVANYHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAEFANF 847
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFS 901
PESVVTLAREKAAELEDF+P+A+ISDDA+ EVGSKRKR + +DMS+GAARAH+FLK+FS
Sbjct: 848 PESVVTLAREKAAELEDFSPTAIISDDAREEVGSKRKRECNMDDMSKGAARAHRFLKDFS 907
Query: 902 DMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
D+PL+TMDLK+AL ++ ++KDDLEKDA +C WLQQFF
Sbjct: 908 DLPLDTMDLKQALLQIGKLKDDLEKDAVNCHWLQQFF 944
>gi|297734165|emb|CBI15412.3| unnamed protein product [Vitis vinifera]
Length = 945
Score = 1670 bits (4324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 799/939 (85%), Positives = 886/939 (94%), Gaps = 4/939 (0%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
+ +KLPELKLDAKQA+GFLSF+KTLP D RAVRFFDRRDYYTAHGENATFIAKTYYHTTT
Sbjct: 7 DHSKLPELKLDAKQAQGFLSFFKTLPRDPRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 66
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
ALRQLG+GSD +SSVSVSKNMFETIAR+LLLERTDHTLELYEGSGSNWRLVKSGTPGNLG
Sbjct: 67 ALRQLGSGSDGISSVSVSKNMFETIARNLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 126
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+EDVLFANNEMQD+PVIVALFPNFRENGCT+GLG+VDLT+RVLGLAEFLDDS FTNVES
Sbjct: 127 SFEDVLFANNEMQDSPVIVALFPNFRENGCTVGLGFVDLTRRVLGLAEFLDDSQFTNVES 186
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
ALVALGC+ECLLP+E+ KSSE +TL DAL+RCGVMLTERK+TEFK RDLVQDL RLV+GS
Sbjct: 187 ALVALGCRECLLPSESAKSSETRTLHDALSRCGVMLTERKRTEFKARDLVQDLGRLVKGS 246
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
+EPVRDLVSGFE+APGALG LLSYAELL+DESNYGN+ I++Y+LDSYMRLDSAA+RALNV
Sbjct: 247 IEPVRDLVSGFELAPGALGLLLSYAELLADESNYGNFTIQRYNLDSYMRLDSAAVRALNV 306
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+DVNEIN R D+VQAFV+DTAL
Sbjct: 307 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDVNEINCRQDLVQAFVEDTAL 366
Query: 364 RQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
RQDLRQHLKRISDIERL+ LEKRRA LQ +VKLYQSSIRLPYI+SAL QY+GQFSSLIK
Sbjct: 367 RQDLRQHLKRISDIERLLRTLEKRRASLQHVVKLYQSSIRLPYIKSALGQYDGQFSSLIK 426
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
E+YLDPLES TDDDHLN+FI LVE +VDL++LENGEYMISS YD L++LKN+QE+LE Q
Sbjct: 427 EKYLDPLESWTDDDHLNRFIGLVEAAVDLNELENGEYMISSGYDAKLASLKNDQETLELQ 486
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
IH+LHKQTA DLDLP+DK+LKL+KGTQFGHVFRITKKEEPKIRKKLT +FIVLETRKDGV
Sbjct: 487 IHNLHKQTAIDLDLPMDKSLKLEKGTQFGHVFRITKKEEPKIRKKLTAKFIVLETRKDGV 546
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
KFTNTKLKKLGDQYQK+L+EYK+CQ+ELV RV+QTA TFSE+F++LA +LSELDVLLSFA
Sbjct: 547 KFTNTKLKKLGDQYQKILDEYKDCQRELVVRVVQTAATFSEVFENLARLLSELDVLLSFA 606
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
DLA+S PT YTRP+I+P +GDIILEGSRHPCVEAQDWVNFIPNDCKL+R KSWFQIITG
Sbjct: 607 DLATSSPTAYTRPEISPSHMGDIILEGSRHPCVEAQDWVNFIPNDCKLVREKSWFQIITG 666
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNMGGKSTFIRQVGVNILMAQVGSFVPCD+A+ISVRDCIFARVGAGDCQLRGVSTFMQEM
Sbjct: 667 PNMGGKSTFIRQVGVNILMAQVGSFVPCDKANISVRDCIFARVGAGDCQLRGVSTFMQEM 726
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
LETASILKGATD+SLIIIDELGRGTSTYDGFGLAWAICEH+VE I+APTLFATHFHELTA
Sbjct: 727 LETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELTA 786
Query: 784 LAHENAN-EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
LAHEN + + KQ+VGVANYHVSAHIDS+SRKLTMLYKVEPGACDQSFGIHVAEFANFP
Sbjct: 787 LAHENTDHQPPEKQIVGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFANFP 846
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAK---IEVGSKRKRISDPNDMSRGAARAHQFLKE 899
ESVVTLAREKAAELEDF+P+ ++S+DA ++VGSKRKR S P+D+SRGAARAHQFLKE
Sbjct: 847 ESVVTLAREKAAELEDFSPTEIVSNDASDKGLKVGSKRKRESSPDDISRGAARAHQFLKE 906
Query: 900 FSDMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
FSD+PLE MDLKEAL++V ++K+DLEKDA +C WLQQFF
Sbjct: 907 FSDLPLEKMDLKEALQQVSKLKNDLEKDAVNCHWLQQFF 945
>gi|356563103|ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
Length = 942
Score = 1652 bits (4277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/938 (83%), Positives = 867/938 (92%)
Query: 1 MDDEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYH 60
DD NKLPELKLD+KQA+GFLSF+KTLP+D RAVRFFDRRDYYTAHGENATFIAKTYYH
Sbjct: 5 FDDLNNKLPELKLDSKQAQGFLSFFKTLPDDPRAVRFFDRRDYYTAHGENATFIAKTYYH 64
Query: 61 TTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPG 120
TTTA+RQLG+GS+ALSSVSVS+NMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPG
Sbjct: 65 TTTAMRQLGSGSNALSSVSVSRNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPG 124
Query: 121 NLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
N+GS+EDVLFAN+EMQD+PV+VAL N+RENGCTIGLG+VDLTKRVLG+AEFLDDSHFTN
Sbjct: 125 NIGSFEDVLFANSEMQDSPVVVALSLNYRENGCTIGLGFVDLTKRVLGMAEFLDDSHFTN 184
Query: 181 VESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
VESA VALGCKEC+LP E+ KS+E + L D LT+CGVMLTE+KK+EFKTRDLVQDL RLV
Sbjct: 185 VESAFVALGCKECILPIESGKSTENRMLCDVLTKCGVMLTEKKKSEFKTRDLVQDLGRLV 244
Query: 241 RGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
+G +EPVRDLVSGFE APGALGALLSYAELL+DESNY NY +R Y+LDSYMRLDSAAMRA
Sbjct: 245 KGPIEPVRDLVSGFEFAPGALGALLSYAELLADESNYENYTLRSYNLDSYMRLDSAAMRA 304
Query: 301 LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLH+WLKQPL+DV EIN+RLDIVQAFV+D
Sbjct: 305 LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHVWLKQPLVDVKEINSRLDIVQAFVED 364
Query: 361 TALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSS 420
TALRQDLRQHLKRISDIERLMHN++KRRAGLQ IVKLYQSSIRLPYI+SAL++Y+GQFS+
Sbjct: 365 TALRQDLRQHLKRISDIERLMHNIQKRRAGLQHIVKLYQSSIRLPYIKSALERYDGQFST 424
Query: 421 LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESL 480
+++ RYL+P+E TDD+HLNKFI LVE SVDLDQLEN EYMIS SYD+ L+ LK++QE L
Sbjct: 425 MMRSRYLEPIELWTDDEHLNKFIGLVEASVDLDQLENREYMISPSYDSILANLKDQQELL 484
Query: 481 ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK 540
E QI +LH+QTA DLDLP+DKALKLDKGTQFGHVFRITKKEEPKIRKKL TQFI+LETRK
Sbjct: 485 ESQIQNLHRQTADDLDLPMDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIILETRK 544
Query: 541 DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLL 600
DGVKFTNTKLKKLGDQYQ++LEEYK+CQK+LV+RV+QTA TFSE+F+SLA ++SELDVLL
Sbjct: 545 DGVKFTNTKLKKLGDQYQQILEEYKSCQKKLVDRVVQTAATFSEVFESLAEIISELDVLL 604
Query: 601 SFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQI 660
SFADLASSCPTPYTRPDI D GDI LEG RHPCVEAQDWVNFIPNDCKL+RGK+WFQI
Sbjct: 605 SFADLASSCPTPYTRPDITSSDEGDITLEGCRHPCVEAQDWVNFIPNDCKLVRGKTWFQI 664
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD ASISVRDCIFARVGAGDCQLRGVSTFM
Sbjct: 665 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDNASISVRDCIFARVGAGDCQLRGVSTFM 724
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
QEMLETASILKGATD+SLIIIDELGRGTSTYDGFGLAWAICEH+VE I+APTLFATHFHE
Sbjct: 725 QEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHE 784
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN 840
LTALA EN + + KQ+VGVANYHVSAHIDS++RKLTMLYKVEPGACDQSFGIHVAEFAN
Sbjct: 785 LTALALENVSNDSQKQIVGVANYHVSAHIDSSTRKLTMLYKVEPGACDQSFGIHVAEFAN 844
Query: 841 FPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
FPESVVTLAREKAAELEDF+PSA + EVGSKRKR +P+DMS+GAA+A QFL+ F
Sbjct: 845 FPESVVTLAREKAAELEDFSPSATSLNHTTQEVGSKRKRAFEPDDMSQGAAKARQFLEAF 904
Query: 901 SDMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
+PLETMD +AL+ VK++ D LEKDA +C WLQQF
Sbjct: 905 VALPLETMDKMQALQEVKKLTDTLEKDAENCNWLQQFL 942
>gi|359491419|ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
Length = 902
Score = 1608 bits (4164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 768/898 (85%), Positives = 850/898 (94%), Gaps = 1/898 (0%)
Query: 42 DYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTL 101
DYYTAHGENATFIAKTYYHTTTALRQLG+GSD +SSVSVSKNMFETIAR+LLLERTDHTL
Sbjct: 5 DYYTAHGENATFIAKTYYHTTTALRQLGSGSDGISSVSVSKNMFETIARNLLLERTDHTL 64
Query: 102 ELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVD 161
ELYEGSGSNWRLVKSGTPGNLGS+EDVLFANNEMQD+PVIVALFPNFRENGCT+GLG+VD
Sbjct: 65 ELYEGSGSNWRLVKSGTPGNLGSFEDVLFANNEMQDSPVIVALFPNFRENGCTVGLGFVD 124
Query: 162 LTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTE 221
LT+RVLGLAEFLDDS FTNVESALVALGC+ECLLP+E+ KSSE +TL DAL+RCGVMLTE
Sbjct: 125 LTRRVLGLAEFLDDSQFTNVESALVALGCRECLLPSESAKSSETRTLHDALSRCGVMLTE 184
Query: 222 RKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYY 281
RK+TEFK RDLVQDL RLV+GS+EPVRDLVSGFE+APGALG LLSYAELL+DESNYGN+
Sbjct: 185 RKRTEFKARDLVQDLGRLVKGSIEPVRDLVSGFELAPGALGLLLSYAELLADESNYGNFT 244
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I++Y+LDSYMRLDSAA+RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL
Sbjct: 245 IQRYNLDSYMRLDSAAVRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 304
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+DVNEIN R D+VQAFV+DTALRQDLRQHLKRISDIERL+ LEKRRA LQ +VKLYQSS
Sbjct: 305 VDVNEINCRQDLVQAFVEDTALRQDLRQHLKRISDIERLLRTLEKRRASLQHVVKLYQSS 364
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
IRLPYI+SAL QY+GQFSSLIKE+YLDPLES TDDDHLN+FI LVE +VDL++LENGEYM
Sbjct: 365 IRLPYIKSALGQYDGQFSSLIKEKYLDPLESWTDDDHLNRFIGLVEAAVDLNELENGEYM 424
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
ISS YD L++LKN+QE+LE QIH+LHKQTA DLDLP+DK+LKL+KGTQFGHVFRITKKE
Sbjct: 425 ISSGYDAKLASLKNDQETLELQIHNLHKQTAIDLDLPMDKSLKLEKGTQFGHVFRITKKE 484
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
EPKIRKKLT +FIVLETRKDGVKFTNTKLKKLGDQYQK+L+EYK+CQ+ELV RV+QTA T
Sbjct: 485 EPKIRKKLTAKFIVLETRKDGVKFTNTKLKKLGDQYQKILDEYKDCQRELVVRVVQTAAT 544
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
FSE+F++LA +LSELDVLLSFADLA+S PT YTRP+I+P +GDIILEGSRHPCVEAQDW
Sbjct: 545 FSEVFENLARLLSELDVLLSFADLATSSPTAYTRPEISPSHMGDIILEGSRHPCVEAQDW 604
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
VNFIPNDCKL+R KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD+A+ISVRDC
Sbjct: 605 VNFIPNDCKLVREKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKANISVRDC 664
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IFARVGAGDCQLRGVSTFMQEMLETASILKGATD+SLIIIDELGRGTSTYDGFGLAWAIC
Sbjct: 665 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAIC 724
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENAN-EFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
EH+VE I+APTLFATHFHELTALAHEN + + KQ+VGVANYHVSAHIDS+SRKLTMLY
Sbjct: 725 EHIVEVIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHVSAHIDSSSRKLTMLY 784
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRI 880
KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF+P+ ++S+DA +VGSKRKR
Sbjct: 785 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPTEIVSNDASDKVGSKRKRE 844
Query: 881 SDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
S P+D+SRGAARAHQFLKEFSD+PLE MDLKEAL++V ++K+DLEKDA +C WLQQFF
Sbjct: 845 SSPDDISRGAARAHQFLKEFSDLPLEKMDLKEALQQVSKLKNDLEKDAVNCHWLQQFF 902
>gi|350538025|ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
gi|296034481|gb|ADG85112.1| mismatch repair protein [Solanum lycopersicum]
Length = 943
Score = 1607 bits (4162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 751/936 (80%), Positives = 861/936 (91%), Gaps = 2/936 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
++Q KLPELKLDA+QA+GFLSF+KTLP D RAVR FDRRDYYTAHG++ATFIAKTYYHTT
Sbjct: 6 EKQGKLPELKLDARQAQGFLSFFKTLPKDVRAVRLFDRRDYYTAHGDDATFIAKTYYHTT 65
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TALRQLG G ALSSVSVS+NMFETIARD+LLER D TLELYEGSGSNW+LVKSGTPGN
Sbjct: 66 TALRQLGNGVGALSSVSVSRNMFETIARDILLERMDRTLELYEGSGSNWKLVKSGTPGNF 125
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+ED+LFANNEMQD+PVIVAL P F +NGCT+GLGYVD+TKRVLGLAEFLDDSHFTN+E
Sbjct: 126 GSFEDILFANNEMQDSPVIVALAPKFDQNGCTVGLGYVDITKRVLGLAEFLDDSHFTNLE 185
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
SALVALGC+ECL+PTE KSSE + L DA++RCGVM+TERKKTEFK RDLVQDL RLV+G
Sbjct: 186 SALVALGCRECLVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQDLGRLVKG 245
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
SVEPVRDLVS FE A GALG +LSYAELL+D+SNYGNY +++Y+LDSYMRLDSAAMRALN
Sbjct: 246 SVEPVRDLVSSFECAAGALGCILSYAELLADDSNYGNYTVKQYNLDSYMRLDSAAMRALN 305
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
V+ESK+DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV+EIN RLD+VQAFV+D A
Sbjct: 306 VMESKSDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLVQAFVEDAA 365
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLRQHLKRISDIERL HNLE++RA L +VKLYQS IR+PYI+S L++Y+GQF+ LI
Sbjct: 366 LRQDLRQHLKRISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERYDGQFAPLI 425
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
+ERY+D LE +DD+HLNKFIALVET+VDLDQLENGEYMISS+YD LSALK+EQE+LE+
Sbjct: 426 RERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEYMISSAYDPNLSALKDEQETLEQ 485
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QIH+LHKQTA+DLDLP+DK+LKLDKGTQFGHVFRITKKEEPK+R++L + +IVLETRKDG
Sbjct: 486 QIHNLHKQTANDLDLPIDKSLKLDKGTQFGHVFRITKKEEPKVRRQLNSHYIVLETRKDG 545
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGD+YQK+L+EYK+CQKELV RV+QT +FSE+F+ LA LSELDVLLSF
Sbjct: 546 VKFTNTKLKKLGDRYQKILDEYKSCQKELVARVVQTVASFSEVFEGLAGSLSELDVLLSF 605
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLASSCPT Y+RP+I+PPD GDIILEG RHPCVEAQDWVNFIPNDC+L+RG+SWFQIIT
Sbjct: 606 ADLASSCPTAYSRPNISPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESWFQIIT 665
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKST+IRQVGVN+LMAQVGSFVPCD A+IS+RDCIFARVGAGDCQL+GVSTFMQE
Sbjct: 666 GPNMGGKSTYIRQVGVNVLMAQVGSFVPCDNATISIRDCIFARVGAGDCQLKGVSTFMQE 725
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGAT+RSL+IIDELGRGTSTYDGFGLAWAICEH+VEEI+APTLFATHFHELT
Sbjct: 726 MLETASILKGATNRSLVIIDELGRGTSTYDGFGLAWAICEHIVEEIKAPTLFATHFHELT 785
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
ALA+EN N KQ+ VAN+HVSAHIDS+SRKLTMLYKV+PGACDQSFGIHVAEFANFP
Sbjct: 786 ALANENGNN-GHKQISSVANFHVSAHIDSSSRKLTMLYKVQPGACDQSFGIHVAEFANFP 844
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
+SVV LAREKA+ELEDF+P A++ +D K EV SKRKR DP+D+SRG ARA QFL++F+
Sbjct: 845 QSVVALAREKASELEDFSPRAMMPNDCK-EVVSKRKREFDPHDVSRGTARARQFLQDFTQ 903
Query: 903 MPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
+PL+ MDLK+AL+++ +MK DLEK+A D WLQQFF
Sbjct: 904 LPLDKMDLKQALQQLSQMKTDLEKNAVDSQWLQQFF 939
>gi|49615724|gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 942
Score = 1604 bits (4154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/936 (79%), Positives = 860/936 (91%), Gaps = 2/936 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
+EQ KLPELKLDA+QA+GFLSF+KTLP DTRAVR FDRRDYYTAHG++A+FIAKTYYHTT
Sbjct: 6 EEQAKLPELKLDARQAQGFLSFFKTLPKDTRAVRLFDRRDYYTAHGDDASFIAKTYYHTT 65
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
+ALRQLG G+DALSSV+VS+NMFETIARD+LLER D TLELYEGSGSNWRLVK+GTPG L
Sbjct: 66 SALRQLGNGADALSSVTVSRNMFETIARDILLERMDRTLELYEGSGSNWRLVKNGTPGVL 125
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+ED+LFANNEMQD+PVIVAL PN +NGCTIGLGYVD+TKR+LGLAEFLDDSHFTN+E
Sbjct: 126 GSFEDILFANNEMQDSPVIVALAPNSSQNGCTIGLGYVDITKRILGLAEFLDDSHFTNLE 185
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
SALVALGC+ECL+P E KSSE + L DA++RCGVM+TERKK EFK RDLVQDL RLV+G
Sbjct: 186 SALVALGCRECLVPAETGKSSEYRPLYDAISRCGVMVTERKKAEFKGRDLVQDLGRLVKG 245
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
S EPVRDLVSGFE A GALG +LSYAELL+DESNYGNY +++Y+L SYMRLDSAAMRALN
Sbjct: 246 STEPVRDLVSGFECAAGALGCILSYAELLADESNYGNYIVKQYNLSSYMRLDSAAMRALN 305
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
V+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV++IN RLD+VQAFV+D A
Sbjct: 306 VMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDKINCRLDLVQAFVEDAA 365
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLRQHLKRI+DIERL NLE++RA L +VKLYQSSIRLPYI+S L +Y+GQF++LI
Sbjct: 366 LRQDLRQHLKRIADIERLTRNLERKRASLVHVVKLYQSSIRLPYIKSVLARYDGQFATLI 425
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
+E+Y+DPLE+L+DD+HLNKFI LVETS+DLDQLE+GEYMISS+YD LSALK+EQE+LER
Sbjct: 426 REKYIDPLENLSDDNHLNKFIGLVETSIDLDQLESGEYMISSAYDPNLSALKDEQETLER 485
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
IH+LHKQTA+DLDLPVDK+LKLDK T FGHVFRITKKEEPKIRK+L + +I+LETRKDG
Sbjct: 486 HIHNLHKQTANDLDLPVDKSLKLDKETTFGHVFRITKKEEPKIRKQLNSHYIILETRKDG 545
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGDQYQK++EEYK+CQKELV RV+QTA +FSE+F+ +A LSELDVLLS
Sbjct: 546 VKFTNTKLKKLGDQYQKIVEEYKSCQKELVARVVQTAASFSEVFEGIAGSLSELDVLLSL 605
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLA+SCPTPYTRP+I PPD GDIILEG RHPCVEAQDWVNFIPNDC+L+RG+SWFQIIT
Sbjct: 606 ADLAASCPTPYTRPNITPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESWFQIIT 665
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKST+IRQVGVNILMAQVGSFVPC+ ASIS+RDCIFARVGAGDCQLRGVSTFMQE
Sbjct: 666 GPNMGGKSTYIRQVGVNILMAQVGSFVPCNNASISIRDCIFARVGAGDCQLRGVSTFMQE 725
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGATD+SLIIIDELGRGTSTYDGFGLAWAICEH+VE I+APTLFATHFHELT
Sbjct: 726 MLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELT 785
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
ALA+ N + KQ+ GVAN+HVSAHID++SRKLTMLYKV+PGACDQSFGIHVAEFANFP
Sbjct: 786 ALANANGDN-GHKQIAGVANFHVSAHIDASSRKLTMLYKVQPGACDQSFGIHVAEFANFP 844
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
SVV LAREKA+ELEDF+P+A+I +D + + SKRKR DPND+SRG+ARA QFL++F++
Sbjct: 845 RSVVDLAREKASELEDFSPNAMILNDGE-KAASKRKRNFDPNDVSRGSARARQFLEDFTN 903
Query: 903 MPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
+PL+ MD K+AL+++ +MK DLE+DA DC WLQQFF
Sbjct: 904 LPLDKMDQKQALQQLSKMKTDLERDAVDCNWLQQFF 939
>gi|449440909|ref|XP_004138226.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
gi|449477104|ref|XP_004154930.1| PREDICTED: DNA mismatch repair protein MSH2-like [Cucumis sativus]
Length = 938
Score = 1571 bits (4069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/937 (81%), Positives = 851/937 (90%), Gaps = 5/937 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
DEQ KLPELKLDAKQA+GFL+F+KTLP D+RAVRFFDRRDYYTAH +NA FIAKTYY TT
Sbjct: 6 DEQTKLPELKLDAKQAQGFLAFFKTLPPDSRAVRFFDRRDYYTAHSDNAVFIAKTYYRTT 65
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TALRQLG S+ALSSVSVSKNMFE+IARDLLLERTDHTLELYEGSGSNWRL+KSG+PGN+
Sbjct: 66 TALRQLGNASEALSSVSVSKNMFESIARDLLLERTDHTLELYEGSGSNWRLIKSGSPGNI 125
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+EDVLFANNEMQD+P IVALFP FR+NGC +GLGYVDLTKRV+G+AEF+DDSHFTNVE
Sbjct: 126 GSFEDVLFANNEMQDSPAIVALFPYFRDNGCIVGLGYVDLTKRVMGMAEFIDDSHFTNVE 185
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
SALV +GCKECLLP E+ KS + K L D LT+CGVMLTERKK+EFK RDLVQDL RL++G
Sbjct: 186 SALVGIGCKECLLPLESGKSGDIKPLHDVLTKCGVMLTERKKSEFKMRDLVQDLSRLIKG 245
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
SVEPVRDLVSGFE AP ALGALL+YAELL+DESNYGNY I+KY+LDSYMRLDSAA+RALN
Sbjct: 246 SVEPVRDLVSGFEFAPAALGALLAYAELLADESNYGNYNIQKYNLDSYMRLDSAAIRALN 305
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV EI++RLD+VQAFV+DTA
Sbjct: 306 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEISSRLDLVQAFVEDTA 365
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
L QDLRQHLKRISDIERL H LEKRRAGLQ IVKLYQSSIRLP+I++AL+ YEGQFSSLI
Sbjct: 366 LCQDLRQHLKRISDIERLTHYLEKRRAGLQHIVKLYQSSIRLPFIKNALENYEGQFSSLI 425
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
KE+YL+ LE+ TD+DHLNKF LVET+VDLDQLENGEYMI+SSYD LS LKN QES+E+
Sbjct: 426 KEKYLEFLETCTDNDHLNKFNNLVETAVDLDQLENGEYMIASSYDDTLSKLKNVQESIEQ 485
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QI LH+Q A+DLDLPVDKALKLDKGTQFGHVFRITKKEEPK+RKKL+T FIVLETRKDG
Sbjct: 486 QIQDLHRQVANDLDLPVDKALKLDKGTQFGHVFRITKKEEPKVRKKLSTHFIVLETRKDG 545
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGDQYQK++EEYK+CQK+LV+RVI+TA +F+E+F+ LA +LSELDVLL F
Sbjct: 546 VKFTNTKLKKLGDQYQKIVEEYKSCQKDLVHRVIETASSFNEVFRPLAELLSELDVLLGF 605
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLASSCPTPYTRPDI + G+IILEGSRHPCVEAQDWVNFIPNDCKL+RGKSWFQIIT
Sbjct: 606 ADLASSCPTPYTRPDITSSNEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIIT 665
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVGVNILMAQVG FVPCD+ASISVRDCIFARVGAGDCQLRGVSTFMQE
Sbjct: 666 GPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQE 725
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGAT++SLIIIDELGRGTSTYDGFGLAWAICEHLVE I+APTLFATHFHELT
Sbjct: 726 MLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATHFHELT 785
Query: 783 ALAHENAN-EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
ALAH N + + + KQM GVAN+HVSAHIDS++ KLTMLYKVEPGACDQSFGIHVAEFANF
Sbjct: 786 ALAHGNTDLDSHGKQMAGVANFHVSAHIDSSNHKLTMLYKVEPGACDQSFGIHVAEFANF 845
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFS 901
P SVV LAREKAAELEDF+ I A G +RKR +DMS+G RA QFL+EFS
Sbjct: 846 PSSVVALAREKAAELEDFS----IDTTASTTNGKERKREFSSDDMSKGVERARQFLEEFS 901
Query: 902 DMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
++PL+ MDLKEAL++V +++D L+KDA D WLQQF
Sbjct: 902 NLPLDKMDLKEALQQVSQLRDGLKKDAVDSNWLQQFL 938
>gi|297834760|ref|XP_002885262.1| hypothetical protein ARALYDRAFT_479358 [Arabidopsis lyrata subsp.
lyrata]
gi|297331102|gb|EFH61521.1| hypothetical protein ARALYDRAFT_479358 [Arabidopsis lyrata subsp.
lyrata]
Length = 937
Score = 1547 bits (4006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 730/936 (77%), Positives = 845/936 (90%), Gaps = 4/936 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
+EQNKLPELKLDAKQA+GFLSFYKTLPN TRAVRFFDR+DYYTAHGEN+ FIAKTYYHTT
Sbjct: 6 EEQNKLPELKLDAKQAQGFLSFYKTLPNATRAVRFFDRKDYYTAHGENSVFIAKTYYHTT 65
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TALRQLG+GS+ALSSVS+SKNMFETIARDLLLER DHT ELYEGSGSNWRLVK+G+PGN+
Sbjct: 66 TALRQLGSGSNALSSVSISKNMFETIARDLLLERNDHTAELYEGSGSNWRLVKTGSPGNI 125
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+EDVLFANNEMQDTPV+V++FP+F++ C IG+ YVDLT+R+LGLAEFLDDS FTN+E
Sbjct: 126 GSFEDVLFANNEMQDTPVVVSIFPSFQDGRCVIGMAYVDLTRRILGLAEFLDDSRFTNLE 185
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
S+L+ALG KEC+ P E+ KS+ECK+L D+L RC VM+TERKK EFK RDL DL RLV+G
Sbjct: 186 SSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLKRLVKG 245
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
++EPVRDLVSGF++A ALGALLS++ELLS+E NYGN+ IR+Y + +MRLDSAAMRALN
Sbjct: 246 NIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALN 305
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
V+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+NEI RLDIVQ FV++
Sbjct: 306 VMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAG 365
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLRQHLKRISD+ERL+ +LE+RR GLQ I+KLYQS+IRLP+I++A+QQY G+FS LI
Sbjct: 366 LRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGEFSPLI 425
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
+ERYL LE+L+D DHL KFI LVE SVDLDQLENGEYMISSSYDT L++LK+++E LE+
Sbjct: 426 RERYLKKLEALSDQDHLGKFIDLVEYSVDLDQLENGEYMISSSYDTTLASLKDQKELLEQ 485
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QIH LHK+TA +LDL VDKALKLDK QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG
Sbjct: 486 QIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 545
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGDQYQ V+++YK+CQKELV+RV+QT +FSE+F+ LA +LSE+DVLLSF
Sbjct: 546 VKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVTSFSEVFEELAGLLSEMDVLLSF 605
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLA+SCPTPY RP++ D GDI+LEGSRHPCVEAQDWVNFIPNDC+L+RGKSWFQI+T
Sbjct: 606 ADLAASCPTPYCRPEVTSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVT 665
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVGV +LMAQVGSFVPCD+ASIS+RDCIFARVGAGDCQLRGVSTFMQE
Sbjct: 666 GPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQE 725
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGATD+SLIIIDELGRGTSTYDGFGLAWAICEHLV+ +APTLFATHFHELT
Sbjct: 726 MLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKKAPTLFATHFHELT 785
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
ALA N+ VGVAN+HVSAHID+ SRKLTMLYKVEPGACDQSFGIHVAEFANFP
Sbjct: 786 ALAQSNSEV--AGDTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFP 843
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
ESVV LAREKAAELEDF+PS++I ++ E G ++ R DP+++SRGAARAH+FLKEF+
Sbjct: 844 ESVVALAREKAAELEDFSPSSMIVNNE--ESGKRKSREDDPDEVSRGAARAHKFLKEFAA 901
Query: 903 MPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
MPL+ M+LK++L+RV+ MKD+LEKDA DC WL+QF
Sbjct: 902 MPLDKMELKDSLQRVRAMKDELEKDAADCHWLRQFL 937
>gi|4139230|gb|AAD04176.1| mismatch repair protein [Arabidopsis thaliana]
Length = 937
Score = 1545 bits (4000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 730/936 (77%), Positives = 846/936 (90%), Gaps = 4/936 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
+EQNKLPELKLDAKQA+GFLSFYKTLPNDTRAVRFFDR+DYYTAHGEN+ FIAKTYYHTT
Sbjct: 6 EEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTT 65
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TALRQLG+GS+ALSSVS+S+NMFETIARDLLLER DHT+ELYEGSGSNWRLVK+G+PGN+
Sbjct: 66 TALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTGSPGNI 125
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+EDVLFANNEMQDTPV+V++FP+F + C IG+ YVDLT+RVLGLAEFLDDS FTN+E
Sbjct: 126 GSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSRFTNLE 185
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
S+L+ALG KEC+ P E+ KS+ECK+L D+L RC VM+TERKK EFK RDL DL RLV+G
Sbjct: 186 SSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLKRLVKG 245
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
++EPVRDLVSGF++A ALGALLS++ELLS+E NYGN+ IR+Y + +MRLDSAAMRALN
Sbjct: 246 NIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALN 305
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
V+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+NEI RLDIVQ FV++
Sbjct: 306 VMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAG 365
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLRQHLKRISD+ERL+ +LE+RR GLQ I+KLYQS+IRLP+I++A+QQY G+F+SLI
Sbjct: 366 LRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSAIRLPFIKTAMQQYTGEFASLI 425
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
ERYL LE+L+D DHL KFI LVE SVDLDQLENGEYMISS+YDT L++LK+++E LE+
Sbjct: 426 SERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSNYDTKLASLKDQKELLEQ 485
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QIH LHK+TA +LDL VDKALKLDK QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG
Sbjct: 486 QIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 545
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGDQYQ V+++Y++CQKELV+RV++T +FSE+F+ LA +LSE+DVLLSF
Sbjct: 546 VKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSF 605
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLA+SCPTPY RP+I D GDI+LEGSRHPCVEAQDWVNFIPNDC+L+RGKSWFQI+T
Sbjct: 606 ADLAASCPTPYCRPEITSLDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVT 665
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVGV +LMAQVGSFVPCD+ASIS+RDCIFARVGAGDCQLRGVSTFMQE
Sbjct: 666 GPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQE 725
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGATD+SLIIIDELGRGTSTYDGFGLAWAICEHLV+ RAPTLFATHFHELT
Sbjct: 726 MLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELT 785
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
ALA AN + VGVAN+HVSAHID+ SRKLTMLYKVEPGACDQSFGIHVAEFANFP
Sbjct: 786 ALAQ--ANSEVSGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFP 843
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
ESVV LAREKAAELEDF+PS++I ++ E G ++ R DP+++SRGA RAH+FLKEF+
Sbjct: 844 ESVVALAREKAAELEDFSPSSMIINNE--ESGKRKSREDDPDEVSRGAERAHKFLKEFAA 901
Query: 903 MPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
MPL+ M+LK++L+RV+ MKD+LEKDA DC WL+QF
Sbjct: 902 MPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937
>gi|42565226|ref|NP_566804.3| DNA mismatch repair protein Msh2 [Arabidopsis thaliana]
gi|3914056|sp|O24617.1|MSH2_ARATH RecName: Full=DNA mismatch repair protein MSH2; Short=AtMSH2;
AltName: Full=MutS protein homolog 2
gi|2522362|gb|AAB82649.1| MutS homolog 2 [Arabidopsis thaliana]
gi|2522364|gb|AAB82650.1| MutS homolog 2 [Arabidopsis thaliana]
gi|2547236|gb|AAB81282.1| DNA mismatch repair protein MSH2 [Arabidopsis thaliana]
gi|11994116|dbj|BAB01119.1| DNA mismatch repair protein MSH2 [Arabidopsis thaliana]
gi|332642591|gb|AEE76112.1| DNA mismatch repair protein Msh2 [Arabidopsis thaliana]
Length = 937
Score = 1545 bits (3999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/936 (77%), Positives = 846/936 (90%), Gaps = 4/936 (0%)
Query: 3 DEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
+EQNKLPELKLDAKQA+GFLSFYKTLPNDTRAVRFFDR+DYYTAHGEN+ FIAKTYYHTT
Sbjct: 6 EEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKTYYHTT 65
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TALRQLG+GS+ALSSVS+S+NMFETIARDLLLER DHT+ELYEGSGSNWRLVK+G+PGN+
Sbjct: 66 TALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTGSPGNI 125
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
GS+EDVLFANNEMQDTPV+V++FP+F + C IG+ YVDLT+RVLGLAEFLDDS FTN+E
Sbjct: 126 GSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSRFTNLE 185
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
S+L+ALG KEC+ P E+ KS+ECK+L D+L RC VM+TERKK EFK RDL DL RLV+G
Sbjct: 186 SSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLKRLVKG 245
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
++EPVRDLVSGF++A ALGALLS++ELLS+E NYGN+ IR+Y + +MRLDSAAMRALN
Sbjct: 246 NIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALN 305
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
V+ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL+D+NEI RLDIVQ FV++
Sbjct: 306 VMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAG 365
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLRQHLKRISD+ERL+ +LE+RR GLQ I+KLYQS+IRLP+I++A+QQY G+F+SLI
Sbjct: 366 LRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGEFASLI 425
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
ERYL LE+L+D DHL KFI LVE SVDLDQLENGEYMISSSYDT L++LK+++E LE+
Sbjct: 426 SERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQKELLEQ 485
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QIH LHK+TA +LDL VDKALKLDK QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG
Sbjct: 486 QIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 545
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKFTNTKLKKLGDQYQ V+++Y++CQKELV+RV++T +FSE+F+ LA +LSE+DVLLSF
Sbjct: 546 VKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSF 605
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLA+SCPTPY RP+I D GDI+LEGSRHPCVEAQDWVNFIPNDC+L+RGKSWFQI+T
Sbjct: 606 ADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVT 665
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVGV +LMAQVGSFVPCD+ASIS+RDCIFARVGAGDCQLRGVSTFMQE
Sbjct: 666 GPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVSTFMQE 725
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILKGA+D+SLIIIDELGRGTSTYDGFGLAWAICEHLV+ RAPTLFATHFHELT
Sbjct: 726 MLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATHFHELT 785
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
ALA AN + VGVAN+HVSAHID+ SRKLTMLYKVEPGACDQSFGIHVAEFANFP
Sbjct: 786 ALAQ--ANSEVSGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFP 843
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
ESVV LAREKAAELEDF+PS++I ++ E G ++ R DP+++SRGA RAH+FLKEF+
Sbjct: 844 ESVVALAREKAAELEDFSPSSMIINNE--ESGKRKSREDDPDEVSRGAERAHKFLKEFAA 901
Query: 903 MPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
+PL+ M+LK++L+RV+ MKD+LEKDA DC WL+QF
Sbjct: 902 IPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL 937
>gi|218196464|gb|EEC78891.1| hypothetical protein OsI_19262 [Oryza sativa Indica Group]
gi|222630934|gb|EEE63066.1| hypothetical protein OsJ_17874 [Oryza sativa Japonica Group]
Length = 942
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 671/935 (71%), Positives = 789/935 (84%), Gaps = 1/935 (0%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
E KLPELKLDA+QA+GF+SF+K LP D+RA+R FDRRDYYTAHGENATFIAK YYHT +
Sbjct: 9 EGGKLPELKLDARQAQGFISFFKKLPQDSRAIRLFDRRDYYTAHGENATFIAKIYYHTMS 68
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
ALRQLG+ SD LSSVSVSK MFETIAR+LLLERTD TLELYEGSGS+WRL KSGTPGN+G
Sbjct: 69 ALRQLGSNSDGLSSVSVSKTMFETIARNLLLERTDRTLELYEGSGSSWRLTKSGTPGNIG 128
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+ED+LFANN+MQD+PV VALFP F+E +GL +VDLT R LGL+EF +DS FTNVES
Sbjct: 129 SFEDILFANNDMQDSPVTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDSRFTNVES 188
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
ALVALGCKECLLP + KS + K L+DA+T C V+LTERKK EFK+RDLVQDL R++RG
Sbjct: 189 ALVALGCKECLLPADCEKSIDLKPLQDAITNCNVLLTERKKVEFKSRDLVQDLGRIIRGP 248
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
VEPVRDLVS F+ A GALGAL+SYAELL+D++NYGNY I KYSLD YMRLDSAA+RALN+
Sbjct: 249 VEPVRDLVSQFDYALGALGALVSYAELLADDTNYGNYTIEKYSLDRYMRLDSAAVRALNI 308
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
E+KTD NKNFSLFGLMNRTCT GMGKRLL+ WLKQPLLDVNEIN RLD+VQAFV+D L
Sbjct: 309 AEAKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPEL 368
Query: 364 RQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
RQ LR LKR+SDI+RL H L KR A LQ +VKLYQS IR+ YI++ LQQY+G FS+LI+
Sbjct: 369 RQGLRYQLKRMSDIDRLTHALRKRTANLQPVVKLYQSCIRVSYIKNVLQQYDGSFSALIR 428
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
++L+ L+ +D +F +LVET++DLDQLENGEY IS Y + L+ LK+E +E
Sbjct: 429 TKFLNSLDEWLTEDRFGRFASLVETAIDLDQLENGEYRISPRYSSDLAVLKDELSEVENH 488
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
I++LHK TA+DLDL +DK LKL+KG Q GHVFRI+KK+E K+RKKLT+ +I++ETRKDGV
Sbjct: 489 INNLHKHTAADLDLTIDKQLKLEKG-QLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGV 547
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
KFT++KLKKLGDQYQ +L EY +CQK++V+ V++ + +FSE+F++ A +LSELDVL SFA
Sbjct: 548 KFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFA 607
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
DLA+S P PY RP+I + GDIILEGSRHPC+EAQD VNFIPNDC L+R KSWFQIITG
Sbjct: 608 DLATSSPIPYVRPEITASEEGDIILEGSRHPCLEAQDGVNFIPNDCTLVREKSWFQIITG 667
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNMGGKSTFIRQVGVN+LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM
Sbjct: 668 PNMGGKSTFIRQVGVNVLMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 727
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
LETASILKGA+D+SLIIIDELGRGTSTYDGFGLAWAICEHLVE RAPTLFATHFHELTA
Sbjct: 728 LETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHFHELTA 787
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
L H++ +E +G+ANYHV AHID +SRKLTMLYKVEPGACDQSFGIHVAEFANFPE
Sbjct: 788 LGHKSGDEHQHVPNLGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 847
Query: 844 SVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM 903
+VV LA+ KA ELEDF+ + SDD+K EVGSKRKR+ P+D++RGAARA L+E + +
Sbjct: 848 AVVALAKSKAEELEDFSTAPNFSDDSKDEVGSKRKRVFSPDDVTRGAARARLLLEELASL 907
Query: 904 PLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
PL+ MD +A E V ++K D EKDA D WLQQF
Sbjct: 908 PLDEMDGTKAAETVTKLKSDFEKDAADNPWLQQFL 942
>gi|226506654|ref|NP_001146301.1| DNA mismatch repair protein MSH2 [Zea mays]
gi|11386957|sp|Q9XGC9.1|MSH2_MAIZE RecName: Full=DNA mismatch repair protein MSH2; AltName: Full=MUS1
gi|4775576|emb|CAB42554.1| MUS1 protein [Zea mays]
gi|414887420|tpg|DAA63434.1| TPA: DNA mismatch repair protein MSH2 [Zea mays]
Length = 942
Score = 1396 bits (3614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/935 (71%), Positives = 778/935 (83%), Gaps = 1/935 (0%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
E KLPE KLDA+QA+GF+SF+K LP D RAVR FDRRDYYTAHGENATFIA+TYYHT +
Sbjct: 9 EGGKLPEFKLDARQAQGFISFFKKLPQDPRAVRLFDRRDYYTAHGENATFIARTYYHTMS 68
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
ALRQLG+ SD + S SVSK MFETIAR++LLERTD TLELYEGSGSNWRL KSGTPGN+G
Sbjct: 69 ALRQLGSSSDGILSASVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGTPGNIG 128
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+ED+LFANN+M+D+PVIVALFP RE+ +GL ++D+T R LGLAEF +DS FTNVES
Sbjct: 129 SFEDILFANNDMEDSPVIVALFPACRESQLYVGLSFLDMTNRKLGLAEFPEDSRFTNVES 188
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
ALVALGCKECLLP + KS + L+D ++ C V+LTE+KK +FK+RDL QDL R++RGS
Sbjct: 189 ALVALGCKECLLPADCEKSIDLNPLQDVISNCNVLLTEKKKADFKSRDLAQDLGRIIRGS 248
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
VEPVRDL+S F+ A G LGALLSYAELL+D++NYGNY I KY+L+ YMRLDSAA+RALN+
Sbjct: 249 VEPVRDLLSQFDYALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAVRALNI 308
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
E KTD NKNFSLFGLMNRTCT GMGKRLL+ WLKQPLLDVNEIN RLD+VQAFV+D L
Sbjct: 309 AEGKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPEL 368
Query: 364 RQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
RQ LRQ LKRISDI+RL H+L K+ A LQ +VKLYQS R+PYI+ LQQY GQFS+LI+
Sbjct: 369 RQGLRQQLKRISDIDRLTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQFSTLIR 428
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
++L+PLE + +F +LVET++DL QLENGEY IS Y + L LK+E +E
Sbjct: 429 SKFLEPLEEWMAKNRFGRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELSVVENH 488
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
I++LH TASDLDL VDK LKL+KG+ GHVFR++KKEE K+RKKLT ++++ETRKDGV
Sbjct: 489 INNLHVDTASDLDLSVDKQLKLEKGS-LGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGV 547
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
KFTN+KLK L DQYQ + EY +CQK++V V++ + TFSE+F++ A +LSELDVL SFA
Sbjct: 548 KFTNSKLKNLSDQYQALFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFA 607
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
DLA+SCP PY RPDI D GDI+L GSRHPC+EAQD VNFIPNDC L+RGKSWFQIITG
Sbjct: 608 DLATSCPVPYVRPDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITG 667
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNMGGKSTFIRQVGVN+LMAQVGSFVPCD+ASISVRDCIFARVGAGDCQL GVSTFMQEM
Sbjct: 668 PNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTFMQEM 727
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
LETASILKGA+D+SLIIIDELGRGTSTYDGFGLAWAICEHL+E RAPTLFATHFHELTA
Sbjct: 728 LETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTA 787
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LAH N +E +GVANYHV AHID SRKLTMLYKVEPGACDQSFGIHVAEFANFPE
Sbjct: 788 LAHRNDDEHQHISDIGVANYHVGAHIDPLSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 847
Query: 844 SVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM 903
+VV LA+ KAAELEDF+ + SDD K EVGSKRKR+ P+D++RGAARA FL+EF+ +
Sbjct: 848 AVVALAKSKAAELEDFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAAL 907
Query: 904 PLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
P++ MD + LE +MK DL+KDA D WLQQFF
Sbjct: 908 PMDEMDGSKILEMATKMKADLQKDAADNPWLQQFF 942
>gi|357121225|ref|XP_003562321.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
MSH2-like [Brachypodium distachyon]
Length = 942
Score = 1391 bits (3600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/935 (70%), Positives = 783/935 (83%), Gaps = 1/935 (0%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
E KLPELKLDA+QA+GF+SF+K LP D RA+RFFDRRDYYTAHGENATFIAKTYYHT T
Sbjct: 9 EGGKLPELKLDARQAQGFISFFKKLPKDPRAIRFFDRRDYYTAHGENATFIAKTYYHTMT 68
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
ALRQLG+ SD +SSVSVS+ MFETIAR+LLLERTD TLELYEGSGS+WRL KSGTPGN+G
Sbjct: 69 ALRQLGSNSDGISSVSVSRAMFETIARNLLLERTDCTLELYEGSGSSWRLAKSGTPGNIG 128
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+ED+LF NN+MQD+PV VALFP RE+ IGL +VD+T R LGLAEF +DS FTNVES
Sbjct: 129 SFEDILFTNNDMQDSPVTVALFPVLRESQLYIGLSFVDMTNRKLGLAEFPEDSRFTNVES 188
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
ALVALGCKECLLP + K + + L+DA+++C V+LTERKK +FK+RDLVQDL R++RGS
Sbjct: 189 ALVALGCKECLLPADFEKPIDLQPLQDAISKCSVLLTERKKADFKSRDLVQDLGRIIRGS 248
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
VEPVRDL+S F+ A GALGAL+SYAELL+D++NYGNY I Y+LD YMRLDSAAMRALN+
Sbjct: 249 VEPVRDLLSQFDYALGALGALVSYAELLADDTNYGNYTIETYNLDRYMRLDSAAMRALNI 308
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
E KTDANKNFSLFGLMNRTCT GMGKRLL+ WLKQPLLDVNEIN RLD+VQAF +D L
Sbjct: 309 AEGKTDANKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFAEDPEL 368
Query: 364 RQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
RQ LRQ LKRISDI+RL H L KR A LQ +VKLYQS + YI+ LQQY GQFS+LI+
Sbjct: 369 RQGLRQQLKRISDIDRLTHALRKRSANLQPVVKLYQSCRGISYIKDVLQQYNGQFSTLIR 428
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
+R++ E + +F +VET++DL Q+ENGEY IS Y + L+ LK+E +E
Sbjct: 429 KRFVSSFEEWLTKNRYGRFSEMVETAIDLKQVENGEYRISPGYSSDLAVLKDELSEVENH 488
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
I++ H TA+DLDL VDK LKL+KG FGHVFRI+KKEE K+RKKLT+ +I++ETRKDGV
Sbjct: 489 INNSHMHTATDLDLSVDKQLKLEKGP-FGHVFRISKKEEQKVRKKLTSSYIIIETRKDGV 547
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
KFT+TKLKKLG+QYQ +L EY +CQK++V+ V++ + TFSE+F++ A ++SELDVL SFA
Sbjct: 548 KFTSTKLKKLGEQYQALLGEYTSCQKKIVDDVVRISCTFSEVFENFAAIISELDVLQSFA 607
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
DLA+SCP PY RPDI + GDI+L+GSRHPC+EAQD VNFIPNDC L+RGKSWFQIITG
Sbjct: 608 DLATSCPVPYIRPDITTSEEGDIVLQGSRHPCLEAQDGVNFIPNDCTLMRGKSWFQIITG 667
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNMGGKSTFIRQVGVN+LMAQ+GSFVPCD+ASISVRDCIFARVGAGDCQLRGVSTFMQEM
Sbjct: 668 PNMGGKSTFIRQVGVNVLMAQIGSFVPCDQASISVRDCIFARVGAGDCQLRGVSTFMQEM 727
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
LETASILKGA+++SLIIIDELGRGTSTYDGFGLAWAICEHLVE RAPTLFATHFHELTA
Sbjct: 728 LETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHFHELTA 787
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LA++N ++ VG+ANYHV AHID +SRKLTMLYKVEPGACDQSFGIHVAEFANFPE
Sbjct: 788 LANKNGDQHQHVPDVGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 847
Query: 844 SVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM 903
+V+ LA+ KA ELEDF+ + +D++ EVGSKRKR+ P+D++RGAARA L+EFS +
Sbjct: 848 AVIALAKSKAEELEDFSAAPNFNDESNDEVGSKRKRVFSPDDVTRGAARARVLLEEFSAL 907
Query: 904 PLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
PL+ MD ++A E V ++K D EKDA WLQQF
Sbjct: 908 PLDEMDGRKATEVVTKLKLDFEKDAAGNPWLQQFL 942
>gi|326515768|dbj|BAK07130.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 942
Score = 1381 bits (3575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/935 (69%), Positives = 777/935 (83%), Gaps = 1/935 (0%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
E KLPELKLDA+QA+GF+SF+K LP D RA+R FDRRDYYTAHGENATFIAK YYHT T
Sbjct: 9 EGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIAKAYYHTMT 68
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
ALRQLG SD +SSVSVS+ MFETIAR+LLL+RTDHTLELYEGSGS+WRL KSGTPGN+G
Sbjct: 69 ALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGSGSSWRLTKSGTPGNIG 128
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+ED+LFANN+MQ +PV VALFP FRE + L +VD+T R LGLAEF +DS FTNVES
Sbjct: 129 SFEDILFANNDMQYSPVTVALFPVFREGQLYVALSFVDMTNRKLGLAEFPEDSRFTNVES 188
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
ALVALGCKECLLP + KS + + L+DA++ C ++LTERKK EFK+RD+VQDL R++RGS
Sbjct: 189 ALVALGCKECLLPADFEKSIDLQPLQDAISNCNILLTERKKAEFKSRDIVQDLGRIIRGS 248
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
VEP+RDL+S F+ A GALGAL+SYAELL+D++NYGNY I K++LD YMRLDSAA+RALN+
Sbjct: 249 VEPIRDLLSQFDYALGALGALVSYAELLADDTNYGNYTIEKFNLDRYMRLDSAAVRALNI 308
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
+E KTD NKNFSLFGLMNRTCTAGMGKRLL+ WLKQPLLDVNEIN RLD+VQAF +D L
Sbjct: 309 VEGKTDVNKNFSLFGLMNRTCTAGMGKRLLNKWLKQPLLDVNEINNRLDMVQAFAEDPEL 368
Query: 364 RQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
LRQHLKRISDI+RL+H L K+ A LQ +VKLYQS +PYI+ LQQY GQFS+ +
Sbjct: 369 HHGLRQHLKRISDIDRLIHALRKKSANLQPVVKLYQSCSTIPYIKGVLQQYNGQFSTSVM 428
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
R+L LE ++ +F LV+T++DLDQ++NGEY IS Y L+ LK+E +E
Sbjct: 429 TRFLSSLEEWLTENRYGRFANLVKTAIDLDQVDNGEYRISPLYSPDLAVLKDELSEVENH 488
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
I++LH TA+DLDL VDK LKL+KG FGHVFRI+KK+E K+RKKLTT +I++ETRKDGV
Sbjct: 489 INNLHMHTATDLDLSVDKQLKLEKGP-FGHVFRISKKDEQKVRKKLTTNYIIIETRKDGV 547
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
KFT+ KLKKLGDQYQ +L +Y +CQK++V+ V+Q + TFSE+F++ A ++SELDVL SFA
Sbjct: 548 KFTSAKLKKLGDQYQSLLGDYTSCQKKIVDNVVQVSCTFSEVFENFAAIISELDVLQSFA 607
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
DLA SCP PY RPDI + GDIIL+GSRHPCVEAQD VNFIPNDC L RGKSWFQIITG
Sbjct: 608 DLAVSCPVPYVRPDITTSEEGDIILQGSRHPCVEAQDGVNFIPNDCTLARGKSWFQIITG 667
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNMGGKSTFIRQVGVN+LMAQVGSFVPCD+ASISVRDCIFARVGAGDCQLRGVSTFMQEM
Sbjct: 668 PNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGVSTFMQEM 727
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
LETASILKGA+++SLIIIDELGRGTSTYDGFGLAWAICEHLVE RAPTLFATHFHELTA
Sbjct: 728 LETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHFHELTA 787
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LA++N ++ +G+ANYHV AHID +SRKLTMLYKVEPG+CDQSFGIHVAEFANFPE
Sbjct: 788 LANKNGDQHQHVPDLGIANYHVGAHIDPSSRKLTMLYKVEPGSCDQSFGIHVAEFANFPE 847
Query: 844 SVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM 903
+V+ LA+ KA ELEDFT + +S + EVGSKRKR+ P+D++RGAARA L++F+ +
Sbjct: 848 AVIALAKSKAEELEDFTSAPNLSGEPSDEVGSKRKRVFSPDDVTRGAARARLLLEDFAAL 907
Query: 904 PLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
PL+ +D +A E V ++K D EKDA WL QF
Sbjct: 908 PLDEVDGSKATEMVAKLKSDFEKDAASNPWLHQFL 942
>gi|242050756|ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [Sorghum bicolor]
gi|241926499|gb|EER99643.1| hypothetical protein SORBIDRAFT_02g038230 [Sorghum bicolor]
Length = 942
Score = 1370 bits (3545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/935 (70%), Positives = 782/935 (83%), Gaps = 1/935 (0%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
E KLPE KLDA+QA+GF+SF+K LP D RAVR FDRRDYYTAHGENATFIA+TYYHT +
Sbjct: 9 EGGKLPEFKLDARQAQGFISFFKRLPQDPRAVRLFDRRDYYTAHGENATFIARTYYHTMS 68
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
ALRQLG+ SD +SSVSVSK MFETIAR++LLERTD TLELYEGSGSNWRL KSGTPGN+G
Sbjct: 69 ALRQLGSSSDGISSVSVSKAMFETIARNILLERTDCTLELYEGSGSNWRLTKSGTPGNIG 128
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+ED+LFANN+MQD+PVIVALFP RE+ +GL ++D+T R LGLAEF +DS FTNVES
Sbjct: 129 SFEDLLFANNDMQDSPVIVALFPVCRESQLYVGLSFLDMTNRKLGLAEFPEDSRFTNVES 188
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
ALVALGCKECLL + KS + LRDA++ C V+LT +KK +FK+RDL QDL R++RGS
Sbjct: 189 ALVALGCKECLLSEDCEKSIDLNPLRDAISNCNVLLTVKKKADFKSRDLAQDLGRIIRGS 248
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
VEPVRDL+S F+ A G LGALLSYAELL+D++NYGNY I KY+L+ YMRLDSAA+RALN+
Sbjct: 249 VEPVRDLLSQFDYALGPLGALLSYAELLADDTNYGNYTIEKYNLNCYMRLDSAAVRALNI 308
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
E KTD NKNFSLFGLMNRTCT GMGKRLL+ WLKQPLLDVNEIN RLD+VQAFV+D L
Sbjct: 309 SERKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPEL 368
Query: 364 RQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
RQ LRQ LKRISDI+RL H L K+ A LQ +VKLYQS R+ YI+ L+QY GQFS+LI+
Sbjct: 369 RQGLRQQLKRISDIDRLTHALRKKSATLQPVVKLYQSCCRISYIKGILEQYNGQFSTLIR 428
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
++L+PLE +D +F +LVET++DL QLENGEY IS Y + L LK+E +E
Sbjct: 429 SKFLEPLEEWMAEDRFGRFSSLVETTIDLGQLENGEYRISPLYSSDLGVLKDELSVVENH 488
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
I++LH TASDLDL VDK LKL+KG GHVFR++KKEE K+RKKLT ++++ETRKDGV
Sbjct: 489 INNLHVDTASDLDLSVDKQLKLEKGP-LGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGV 547
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
KFT++KLKKL DQYQ + EY +CQK++V V++ + ++SE+F++ A +LSELDVL SFA
Sbjct: 548 KFTSSKLKKLSDQYQALFAEYTSCQKKVVGDVVRVSGSYSEVFENFAAVLSELDVLQSFA 607
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
DLA+SCP PY RPDI D GDI+L GSRHPC+EAQD VNFIPNDC L+RGKSWFQIITG
Sbjct: 608 DLATSCPVPYVRPDITVSDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITG 667
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNMGGKSTFIRQVGVN+LMAQVGSFVPCD+AS+SVRDCIFARVGAGDCQL GVSTFMQEM
Sbjct: 668 PNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASVSVRDCIFARVGAGDCQLHGVSTFMQEM 727
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
LETASILKGA+D+SLIIIDELGRGTSTYDGFGLAWAICEHL+E RAPTLFATHFHELTA
Sbjct: 728 LETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTA 787
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LAH+N +E +G+ANYHV AHID +SRKLTMLYKVEPGACDQSFGIHVAEFANFPE
Sbjct: 788 LAHKNDDEHQRVSNIGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 847
Query: 844 SVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM 903
+VV LA+ KAAELEDF+ + SDD+K EVGSKRKR+ P+D++RGAARA FL++F+ +
Sbjct: 848 AVVALAKSKAAELEDFSTTPTFSDDSKDEVGSKRKRVFSPDDVTRGAARARLFLEDFAAL 907
Query: 904 PLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
P++ MD + +E V +MK DL+KDA D WLQQFF
Sbjct: 908 PVDEMDRSKIVEMVTKMKSDLQKDAADNPWLQQFF 942
>gi|168053439|ref|XP_001779144.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669504|gb|EDQ56090.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 956
Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/945 (64%), Positives = 762/945 (80%), Gaps = 11/945 (1%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
++ KLPELKLD KQA+GF+SF++ LP + +AVRFFDR+DY+TAHG+NATFIA TYY T T
Sbjct: 10 DEPKLPELKLDVKQAQGFISFFRRLPENEQAVRFFDRKDYFTAHGDNATFIASTYYRTLT 69
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
LRQLG+G+D+L V+++K+MFETI RDLLLERTD T+ELYEG+GS W+LV+SG+PG LG
Sbjct: 70 VLRQLGSGADSLPGVTINKSMFETIVRDLLLERTDCTVELYEGTGSKWQLVRSGSPGKLG 129
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+E+VLFA+NEMQ+TPV++A+ R++ +G+ +VD+TKR LG+ EFLDD +T++ES
Sbjct: 130 SFEEVLFASNEMQETPVVMAVNITTRQSERCVGIAFVDMTKRQLGMTEFLDDDLYTSLES 189
Query: 184 ALVALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
A+VAL C+EC++P A KS + + LRD + RC V++TE+KK++F++RD+ QDL RLV+G
Sbjct: 190 AMVALSCRECIIPMPTAAKSPDDRKLRDVMARCNVLVTEKKKSDFRSRDVEQDLGRLVKG 249
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
E ++LV+ ++A AL ALL+Y ELLSD++NYG Y I+ YSLD YMRLD+AA+RALN
Sbjct: 250 PAEQHKELVAASDLAAAALAALLTYTELLSDDTNYGKYVIQPYSLDLYMRLDAAALRALN 309
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
V ESKTD+NK+FSLFGLMNRTCT GMGKRLL+ WLKQPL+DV EI RLD VQAFV+D
Sbjct: 310 VTESKTDSNKHFSLFGLMNRTCTQGMGKRLLNRWLKQPLVDVVEITKRLDTVQAFVEDLE 369
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLR HL+R+ DIERL+ LEKR+AGLQ +V+LYQ+S+RLP IR+ L++Y+G+FS +
Sbjct: 370 LRQDLRSHLRRMPDIERLVSKLEKRKAGLQDVVRLYQASLRLPLIRTCLEKYDGEFSKDL 429
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
+E+Y L+ T +HL KF LVE +VDL+QL+NGEY+IS+ YD L LK ++ +ER
Sbjct: 430 QEKYGTHLDVWTQPNHLGKFDGLVEAAVDLEQLQNGEYIISADYDNSLQELKTGRDDVER 489
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QI +H+Q+A DL LP +K+LKLDK TQ+GHVFRITKKEEPK+RKKL +Q+I LETRKDG
Sbjct: 490 QILKVHQQSADDLGLPAEKSLKLDKSTQYGHVFRITKKEEPKVRKKLNSQYITLETRKDG 549
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE-----IFKSLATMLSELD 597
+KFTN KL++L +QY K+ EEY + Q+ELV +V+ A TF E IF +A +L+++D
Sbjct: 550 IKFTNAKLRRLSEQYTKLTEEYSSAQRELVAKVVDVAATFVEASFSTIFSGVAVLLADMD 609
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
VLLSFADLAS P PY RP I D GDIILEGSRHPCVEAQD VNFI NDC+L+RGKSW
Sbjct: 610 VLLSFADLASCSPVPYVRPSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVRGKSW 669
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
FQIITGPNMGGKSTFIRQVGVN+LMAQVG FVPCDRA ISVRDCIFARVGAGDCQLRGVS
Sbjct: 670 FQIITGPNMGGKSTFIRQVGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQLRGVS 729
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETASI+K AT+RSLIIIDELGRGTSTYDGFGLAWAICE+LVE RAPTLFATH
Sbjct: 730 TFMAEMLETASIIKSATERSLIIIDELGRGTSTYDGFGLAWAICEYLVEVTRAPTLFATH 789
Query: 778 FHELTALAHENANEFNTK---QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
FHELTAL H N+ + +VG+ANYHVSAHID+ S+KL MLYKVE G CDQSFGIH
Sbjct: 790 FHELTALEHSNSPPVHGPPRGPLVGIANYHVSAHIDTKSQKLAMLYKVEEGPCDQSFGIH 849
Query: 835 VAEFANFPESVVTLAREKAAELEDFTPSA--VISDDAKIEVGSKRKRISDPNDMSRGAAR 892
VAEFA+FPESVV LA++KAAELEDF+ + V +K EVG+KRKR+S P+D GA R
Sbjct: 850 VAEFAHFPESVVELAKQKAAELEDFSDTGKDVSGGLSKDEVGTKRKRVSGPDDKVLGAGR 909
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQF 937
+FL+E + +P++ M +E ++K +K + ++DA WLQQ
Sbjct: 910 VRRFLQEMAALPVDKMSREETYAKLKALKSEFDRDAATNSWLQQI 954
>gi|71835971|gb|AAZ42361.1| DNA mismatch repair protein MSH2 [Physcomitrella patens]
Length = 951
Score = 1246 bits (3224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/940 (64%), Positives = 754/940 (80%), Gaps = 6/940 (0%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTT 63
++ KLPELKLD KQA+GF+SF++ LP + +AVRFFDRRDY+TAHG+NATFIA TYY T T
Sbjct: 10 DEPKLPELKLDVKQAQGFISFFRRLPENEQAVRFFDRRDYFTAHGDNATFIASTYYRTLT 69
Query: 64 ALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
LRQLG+G+D+L V+++K+MFETI RDLLLERTD T+ELYEG+GS W+LV+SG+PG LG
Sbjct: 70 VLRQLGSGADSLPGVTINKSMFETIVRDLLLERTDCTVELYEGTGSKWQLVRSGSPGKLG 129
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
S+E+VLFA+NEMQ+TPV++A+ R++ +G+ +VD+TKR LG+ EFLDD +T++ES
Sbjct: 130 SFEEVLFASNEMQETPVVMAVNITTRQSERCVGIAFVDMTKRQLGMTEFLDDDLYTSLES 189
Query: 184 ALVALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
A+VAL C+EC++P A KS + + LRD + RC V++TE+KK++F++RD+ QDL RLV+G
Sbjct: 190 AMVALSCRECIIPMPTAAKSPDDRKLRDVMARCNVLVTEKKKSDFRSRDVEQDLGRLVKG 249
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
E ++LV+ ++A AL ALL+Y ELLSD++NYG Y I+ YSLD YMRLD+AA+RALN
Sbjct: 250 PAEQHKELVAASDLAAAALAALLTYTELLSDDTNYGKYVIQPYSLDLYMRLDAAALRALN 309
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
V ESKTD+NK+ SLFGLMNRTCT GMGKRLL+ WLKQPL+DV EI RLD VQAFV+D
Sbjct: 310 VTESKTDSNKHLSLFGLMNRTCTQGMGKRLLNRWLKQPLVDVVEITKRLDTVQAFVEDLE 369
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
LRQDLR HL+R+ DIERL+ LEKR+AGLQ +V+LYQ+S+RLP IR+ L++Y+G+FS +
Sbjct: 370 LRQDLRSHLRRMPDIERLVSKLEKRKAGLQDVVRLYQASLRLPLIRTCLEKYDGEFSKDL 429
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
+E+Y L+ T +HL KF LVE +VDL+QL+NGEY+ S S +N ER
Sbjct: 430 QEKYGAHLDVWTQPNHLGKFDGLVEAAVDLEQLQNGEYIYFSRLCQQSSRAQNWARRCER 489
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
QI +H+Q+A DL LP +K+LKLDK TQ+GHVFRITKKEEPK+RKKL +Q+I LETRKDG
Sbjct: 490 QILKVHQQSADDLGLPAEKSLKLDKSTQYGHVFRITKKEEPKVRKKLNSQYITLETRKDG 549
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
+KFTN KL++L +QY K+ EEY + Q+ELV +V+ A TF EIF +A +L+++DVLLSF
Sbjct: 550 IKFTNAKLRRLSEQYTKLTEEYSSAQRELVAKVVDVAATFVEIFSGVAVLLADMDVLLSF 609
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
ADLAS P PY RP I D GDIILEGSRHPCVEAQD VNFI NDC+L+RGKSWFQIIT
Sbjct: 610 ADLASCSPVPYVRPSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVRGKSWFQIIT 669
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVGVN+LMAQVG FVPCDRA ISVRDCIFARVGAGDCQLRGVSTFM E
Sbjct: 670 GPNMGGKSTFIRQVGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQLRGVSTFMAE 729
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASI+K AT+RSLIIIDELGRGTSTYDGFGLAWAICE+LVE RAPTLFATHFHELT
Sbjct: 730 MLETASIIKSATERSLIIIDELGRGTSTYDGFGLAWAICEYLVEVTRAPTLFATHFHELT 789
Query: 783 ALAHENANEFNTK---QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
AL H N+ + +VG+ANYHVSAHID+ S+KL MLYKVE G CDQSFGIHVAEFA
Sbjct: 790 ALEHSNSPPVHGPPRGPLVGIANYHVSAHIDTKSQKLAMLYKVEEGPCDQSFGIHVAEFA 849
Query: 840 NFPESVVTLAREKAAELEDFTPSA--VISDDAKIEVGSKRKRISDPNDMSRGAARAHQFL 897
+FPESVV LA++KAAELEDF+ + V +K EVG+KRKR+S P+D GA R +FL
Sbjct: 850 HFPESVVELAKQKAAELEDFSDTGKDVSGGLSKDEVGTKRKRVSGPDDKVLGAGRVRRFL 909
Query: 898 KEFSDMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQF 937
+E + +P++ M +E ++K +K + ++DA WLQQ
Sbjct: 910 QEMAALPVDKMSREETYAKLKALKSEFDRDAATNSWLQQI 949
>gi|302801095|ref|XP_002982304.1| hypothetical protein SELMODRAFT_268576 [Selaginella moellendorffii]
gi|300149896|gb|EFJ16549.1| hypothetical protein SELMODRAFT_268576 [Selaginella moellendorffii]
Length = 936
Score = 1199 bits (3101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/931 (61%), Positives = 739/931 (79%), Gaps = 9/931 (0%)
Query: 1 MDDEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYH 60
M+D+ KLPELKLDAKQA+GF+ F++ LP D +RFFDRRDY+TAHG+NA+ IA+ YY
Sbjct: 1 MEDDP-KLPELKLDAKQAQGFIKFFRKLPEDPSVIRFFDRRDYFTAHGDNASLIARLYYR 59
Query: 61 TTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPG 120
TTTALRQ+G+GSD LSSVS+SK+MFE I RD+LLE+T++ +ELYEGSG NW+L KS TPG
Sbjct: 60 TTTALRQVGSGSDTLSSVSISKSMFEVITRDVLLEKTEYNVELYEGSGGNWKLAKSATPG 119
Query: 121 NLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
LGS+EDVLF++ +M DTPV++A++ R+ +G+ + D+T+R LG EFLDD +TN
Sbjct: 120 KLGSFEDVLFSSIDMHDTPVVMAVWTVARDQEQLVGIAFTDMTRRTLGTLEFLDDDQYTN 179
Query: 181 VESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
+ESAL+ALGC+EC+LP E KS + + LRD L RC V LTE+KK EFK+RD+ QDL RL+
Sbjct: 180 LESALLALGCRECVLPAENAKSVDGRRLRDVLARCNVRLTEKKKAEFKSRDIEQDLSRLI 239
Query: 241 RG-SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
+ SVE +R+LV +E+A AL ALL+Y ++ +D+SN+G Y +++YSLD YMRLD+AA+R
Sbjct: 240 KSTSVEELRELVVKYEVASAALAALLAYTDIFADDSNHGKYRLQQYSLDRYMRLDAAALR 299
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
AL+VLESK D NKN +LFGLMNRT TAGMGKRLL+ WLKQPLLDV+EI R D+VQ FV+
Sbjct: 300 ALHVLESKNDPNKNSTLFGLMNRTSTAGMGKRLLNRWLKQPLLDVDEIKHRHDVVQMFVE 359
Query: 360 DTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFS 419
D LR+ L+ LKR+ D+ERL LE+ RA LQ +VKLYQ S+RL ++ AL++YEG+F+
Sbjct: 360 DAELRESLKNCLKRVPDVERLTRKLERSRATLQDLVKLYQVSVRLSVVKDALERYEGEFA 419
Query: 420 SLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQES 479
S I+ERY+ PL T +HL ++ AL+E+++DLDQ++NGEY+IS+SYD+ L +K ++++
Sbjct: 420 SAIEERYVVPLREWTLAEHLGRYDALIESAIDLDQIKNGEYIISASYDSSLKTIKADRDA 479
Query: 480 LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR 539
+E +I H+Q A+DLDLP DK+LKLDK TQ+GHVFRITKKEEPK+RKKL Q+I LETR
Sbjct: 480 VEEEIREAHEQAANDLDLPADKSLKLDKTTQWGHVFRITKKEEPKVRKKLAVQYITLETR 539
Query: 540 KDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVL 599
KDG+KFT +KL++L ++Y + E Y N Q++LV R++Q + ++ EIF A +L+ELDVL
Sbjct: 540 KDGIKFTTSKLRRLSERYGNLTENYTNTQRDLVKRLVQVSQSYVEIFNGAANLLAELDVL 599
Query: 600 LSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQ 659
LSFADLA S PTPY RP I + GDIILEGSRHPCVEAQD VNFIPNDC+LIRGKSWFQ
Sbjct: 600 LSFADLAVSSPTPYVRPIITGQNEGDIILEGSRHPCVEAQDDVNFIPNDCRLIRGKSWFQ 659
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
IITGPNMGGKST+IRQ+GVNILMAQVG FVPC RA IS+R CIFARVGAGDCQLRGVSTF
Sbjct: 660 IITGPNMGGKSTYIRQIGVNILMAQVGCFVPCYRAEISIRSCIFARVGAGDCQLRGVSTF 719
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M EMLET++ILK AT+ SLII+DELGRGTSTYDGFGLAWAICE++V+ RAPTLFATHFH
Sbjct: 720 MAEMLETSAILKSATETSLIIVDELGRGTSTYDGFGLAWAICEYIVDVTRAPTLFATHFH 779
Query: 780 ELTALAHE---NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
ELT+++H +A+ + VG++N+HVSAHID +SRKLTMLYKVE G CDQSFGIHVA
Sbjct: 780 ELTSISHRQGPSAHGPSKGPPVGISNFHVSAHIDPSSRKLTMLYKVEDGPCDQSFGIHVA 839
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQF 896
EFA FPE VV LA++KAAELEDF+P A++ D+ KR S + +G +F
Sbjct: 840 EFARFPECVVALAKQKAAELEDFSPQAILEDEGDAGSKRKRSSSSSSSSGDKG----WKF 895
Query: 897 LKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
LK F+ MPL+ M + AL++V+ +K + D
Sbjct: 896 LKGFAAMPLDQMSHEHALKKVQELKAEFLDD 926
>gi|302765627|ref|XP_002966234.1| hypothetical protein SELMODRAFT_85179 [Selaginella moellendorffii]
gi|300165654|gb|EFJ32261.1| hypothetical protein SELMODRAFT_85179 [Selaginella moellendorffii]
Length = 940
Score = 1194 bits (3089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/926 (61%), Positives = 735/926 (79%), Gaps = 9/926 (0%)
Query: 7 KLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
KLPELKLDAKQA+GF+ F++ LP D +RFFDRRDY+TAHG+NA+ IA+ YY TTTALR
Sbjct: 9 KLPELKLDAKQAQGFIKFFRKLPEDPSVIRFFDRRDYFTAHGDNASLIARLYYRTTTALR 68
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYE 126
QLG+GSD LSSVS+SK+MFE I RD+LLE+T++ +ELYEGSG+NW+L KS TPG LGS+E
Sbjct: 69 QLGSGSDTLSSVSISKSMFEVITRDVLLEKTEYNVELYEGSGANWKLAKSATPGKLGSFE 128
Query: 127 DVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALV 186
DVLF++ +M DTPV++A++ R+ +G+ + D+T+R LG EFLDD +TN+ESAL+
Sbjct: 129 DVLFSSIDMHDTPVVMAVWTVARDQEQLVGIAFTDMTRRTLGTLEFLDDDQYTNLESALL 188
Query: 187 ALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG-SVE 245
ALGC+EC+LP E KS + + LRD L RC V LTE+KK EFK+RD+ QDL RL++ SVE
Sbjct: 189 ALGCRECVLPAENAKSVDGRRLRDVLARCNVRLTEKKKAEFKSRDIEQDLSRLIKSTSVE 248
Query: 246 PVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE 305
+R+LV +E+A AL ALL+Y ++ +D+SN+G Y +++YSLD YMRLD AA+RAL+VLE
Sbjct: 249 ELRELVVKYEVASAALAALLAYTDIFADDSNHGKYRLQQYSLDRYMRLDVAALRALHVLE 308
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
SK D NKN +LFGLMN T TAGMGKRLL+ WLKQPLLDV+EI R D+VQ FV+D LR+
Sbjct: 309 SKNDPNKNSTLFGLMNHTSTAGMGKRLLNRWLKQPLLDVDEIKHRHDVVQMFVEDAELRE 368
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
L+ LKR+ D+ERL LE+ RA LQ +VKLYQ S+RL I+ AL++YEG+F+S ++ER
Sbjct: 369 SLKNCLKRVPDVERLTRKLERSRATLQDLVKLYQVSVRLSVIKDALERYEGEFASAVEER 428
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
Y+ PL T +HL ++ AL+E+++DLDQ++NGEY+IS+SYD+ L +K +++++E +I
Sbjct: 429 YVVPLREWTLAEHLGRYDALIESAIDLDQIKNGEYIISASYDSSLKTIKADRDTVEEEIR 488
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
H+Q A+DLDLP DK+LKLDK TQ+GHVFRITKKEEPK+RKKL Q+I LETRKDG+KF
Sbjct: 489 EAHEQAANDLDLPADKSLKLDKTTQWGHVFRITKKEEPKVRKKLAVQYITLETRKDGIKF 548
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
T +KL++L ++Y + E Y N Q++LV R++Q + ++ EIF A +L+ELDVLLSFADL
Sbjct: 549 TTSKLRRLSERYGSLTENYTNTQRDLVKRLVQVSQSYVEIFNGAANLLAELDVLLSFADL 608
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL-IRGKSWFQIITGP 664
A S PTPY RP I + GDIILEGSRHPCVEAQD VNFIPNDC+L IRGKSWFQIITGP
Sbjct: 609 AVSSPTPYVRPIITGQNEGDIILEGSRHPCVEAQDDVNFIPNDCRLVIRGKSWFQIITGP 668
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NMGGKST+IRQ+GVNILMAQVG FVPCDRA IS+R CIFARVGAGDCQLRGVSTFM EML
Sbjct: 669 NMGGKSTYIRQIGVNILMAQVGCFVPCDRAEISIRSCIFARVGAGDCQLRGVSTFMAEML 728
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
ET++ILK AT+ SLII+DELGRGTSTYDGFGLAWAICE++V+ RAPTLFATHFHELT++
Sbjct: 729 ETSAILKSATETSLIIVDELGRGTSTYDGFGLAWAICEYIVDVTRAPTLFATHFHELTSI 788
Query: 785 AHE---NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
+H +A+ + VG++N+HVSAHID +SRKLTMLYKVE G CDQSFGIHVAEFA F
Sbjct: 789 SHRQGPSAHGPSKGPPVGISNFHVSAHIDPSSRKLTMLYKVEDGPCDQSFGIHVAEFARF 848
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFS 901
PE VV LA++KAAELEDF+P A++ D+ KR S + +G +FLK F+
Sbjct: 849 PECVVVLAKQKAAELEDFSPQAILEDEGDAGSKRKRSSSSSSSSGDKG----WKFLKGFA 904
Query: 902 DMPLETMDLKEALERVKRMKDDLEKD 927
+PL+ M + AL++V+ +K + D
Sbjct: 905 ALPLDQMSHEHALKKVQELKAEFLDD 930
>gi|219886557|gb|ACL53653.1| unknown [Zea mays]
Length = 618
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/619 (70%), Positives = 510/619 (82%), Gaps = 1/619 (0%)
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
MNRTCT GMGKRLL+ WLKQPLLDVNEIN RLD+VQAFV+D LRQ LRQ LKRISDI+R
Sbjct: 1 MNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPELRQGLRQQLKRISDIDR 60
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L H+L K+ A LQ +VKLYQS R+PYI+ LQQY GQFS+LI+ ++L+PLE +
Sbjct: 61 LTHSLRKKSANLQPVVKLYQSCSRIPYIKGILQQYNGQFSTLIRSKFLEPLEEWMAKNRF 120
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
+F +LVET++DL QLENGEY IS Y + L LK+E +E I++LH TASDLDL V
Sbjct: 121 GRFSSLVETAIDLAQLENGEYRISPLYSSDLGVLKDELSVVENHINNLHVDTASDLDLSV 180
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
DK LKL+KG+ GHVFR++KKEE K+RKKLT ++++ETRKDGVKFTN+KLK L DQYQ
Sbjct: 181 DKQLKLEKGS-LGHVFRMSKKEEQKVRKKLTGSYLIIETRKDGVKFTNSKLKNLSDQYQA 239
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ EY +CQK++V V++ + TFSE+F++ A +LSELDVL SFADLA+SCP PY RPDI
Sbjct: 240 LFGEYTSCQKKVVGDVVRVSGTFSEVFENFAAVLSELDVLQSFADLATSCPVPYVRPDIT 299
Query: 620 PPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
D GDI+L GSRHPC+EAQD VNFIPNDC L+RGKSWFQIITGPNMGGKSTFIRQVGVN
Sbjct: 300 ASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQVGVN 359
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
+LMAQVGSFVPCD+ASISVRDCIFARVGAGDCQL GVSTFMQEMLETASILKGA+D+SLI
Sbjct: 360 VLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLHGVSTFMQEMLETASILKGASDKSLI 419
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
IIDELGRGTSTYDGFGLAWAICEHL+E RAPTLFATHFHELTALAH N +E +G
Sbjct: 420 IIDELGRGTSTYDGFGLAWAICEHLMEVTRAPTLFATHFHELTALAHRNDDEHQHISDIG 479
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
VANYHV AHID SRKLTMLYKVEPGACDQSFGIHVAEFANFPE+VV LA+ KAAELEDF
Sbjct: 480 VANYHVGAHIDPLSRKLTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKSKAAELEDF 539
Query: 860 TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKR 919
+ + SDD K EVGSKRKR+ P+D++RGAARA FL+EF+ +P++ MD + LE +
Sbjct: 540 STTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAALPMDEMDGSKILEMATK 599
Query: 920 MKDDLEKDAGDCCWLQQFF 938
MK DL+KDA D WLQQFF
Sbjct: 600 MKADLQKDAADNPWLQQFF 618
>gi|145341286|ref|XP_001415744.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575967|gb|ABO94036.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 936
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/921 (49%), Positives = 624/921 (67%), Gaps = 25/921 (2%)
Query: 21 FLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
F+ FY+ LP++T R VRFFDR+D +AHG++A +IA+ +Y TT+ ++ +G+G DAL V+
Sbjct: 26 FVRFYRGLPSETARVVRFFDRKDCISAHGDDAMYIARAFYKTTSVIKTMGSGDDALPGVA 85
Query: 80 VSKNMFETIARDLLLERTDHTLELYEGS--GSNWRLVKSGTPGNLGSYEDVLFANNEMQD 137
++++MFE+ R+LLL+ +E YE S W VKS +PG L ++ED LF +NEM D
Sbjct: 86 LNRSMFESALRELLLDGDGARVEFYEESKPSGTWTCVKSASPGKLQAFEDELFRSNEMSD 145
Query: 138 TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT 197
V+ A+ R +G+ Y + T R LG F+DD + +ES L +G KEC++P
Sbjct: 146 ASVVCAV----RVANGNVGVAYANTTTRELGACAFVDDEQYCTLESVLCQIGVKECVVPK 201
Query: 198 EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIA 257
E ++ E + LRD ++RCG + TER+ +F +DL DL RLVRG+VE R ++ A
Sbjct: 202 EGTETPEGRRLRDVVSRCGALATERQARDFDAQDLENDLGRLVRGNVEAHRAVIDQSH-A 260
Query: 258 PGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
L A+L ++E+L+D +N+G + Y YMRLD++A+RALNVL ++D +FSL+
Sbjct: 261 AACLAAVLRFSEMLADSANHGRCTLSMYDTGRYMRLDASALRALNVLPERSDGPSSFSLY 320
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISD 376
GL+N+ C MG+RLL WLKQPL+DVNEI R D+V FV + +R LR HL+ + D
Sbjct: 321 GLLNK-CRTPMGRRLLSRWLKQPLVDVNEIATRHDVVNEFVTNAEVRDALRGAHLRALPD 379
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
IER+ LE+R+A L + +LYQ+S LP++ AL++ EG+ I+++Y + L+ L+
Sbjct: 380 IERITRKLERRKASLMDLCRLYQASAALPHMAEALERCEGRHGDYIRKKYAEELKKLSAP 439
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
HL +F AL+E +VDL ++ + EY+I +SYD L L+ ++++LE+QI + DL
Sbjct: 440 SHLGRFEALLEAAVDLSKIPD-EYVICASYDAELGELQKQKDTLEKQIRDAFADASDDLG 498
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+ DK LKL+ G R+TKK+E +RKKL+ + +LE +KDG KFTN K++ L +Q
Sbjct: 499 MERDKQLKLEHNNMHGWFMRLTKKDETSVRKKLSVSYQILEAKKDGTKFTNKKIRGLSEQ 558
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
+ Y Q+ LV+RV+ A TFSEIF S++ M +E+DVL SFA++A S P P+ RP
Sbjct: 559 RVSLDRSYDAKQRHLVDRVVDVAATFSEIFLSVSAMTAEIDVLASFAEVAVSAPVPFVRP 618
Query: 617 DINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
++ I LE SRHP VEAQD V FI N C + +G+SWFQIITGPNMGGKSTFIRQV
Sbjct: 619 IMHEKTSDTIHLENSRHPNVEAQDNVRFIANTCSMKKGESWFQIITGPNMGGKSTFIRQV 678
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
GV +L+AQVGSFVPCD A I+VRD IFARVGAGDCQLRG+STFM EMLETA+ILK AT
Sbjct: 679 GVCVLLAQVGSFVPCDDAVIAVRDAIFARVGAGDCQLRGISTFMAEMLETAAILKAATSS 738
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SL+IIDELGRGTSTYDGFGLAWAI EH+V EI+AP LFATHFHELTAL +
Sbjct: 739 SLVIIDELGRGTSTYDGFGLAWAISEHIVNEIQAPCLFATHFHELTALEGPS-------- 790
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
GV+N+HV A ID SRKLTMLY+++PGACDQSFGIH AEFA FPE V+ +AR KA EL
Sbjct: 791 --GVSNFHVEALIDQESRKLTMLYQIKPGACDQSFGIHCAEFARFPEEVLKIARAKADEL 848
Query: 857 EDFTPSAVISDDAKIEVGSKRKRISDP---NDMSRGAARAHQFLKEFSDMPLETMDLKEA 913
EDF+ S A I KR+R +P +DM+RG RA QFL +F+ +PL+ M EA
Sbjct: 849 EDFSKSGAERAVADIS-DPKRQRTDEPGVSDDMARGVVRARQFLSDFAAVPLDRMTPAEA 907
Query: 914 LERVKRMKDDLEKDAGDCCWL 934
+ R +++K +LE DA WL
Sbjct: 908 VARARQLKSELETDAKHSPWL 928
>gi|308808672|ref|XP_003081646.1| Mismatch repair ATPase MSH4 (MutS family) (ISS) [Ostreococcus
tauri]
gi|116060111|emb|CAL56170.1| Mismatch repair ATPase MSH4 (MutS family) (ISS) [Ostreococcus
tauri]
Length = 913
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/932 (48%), Positives = 610/932 (65%), Gaps = 40/932 (4%)
Query: 14 DAKQARGFLSFYKTLPND-----TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
DA F Y L D R VRFFDRRD+Y+ HG +A ++A+T+Y TT+ ++
Sbjct: 3 DADAETKFARVYARLIADDGRAGERVVRFFDRRDFYSVHGADAEYVARTFYKTTSVIKHT 62
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHT-LELYEGS--GSNWRLVKSGTPGNLGSY 125
G G DAL+ V++++ MFET R+LL+E + +ELYE S W L K+ +PG ++
Sbjct: 63 GRGEDALAGVTLNRAMFETALRELLIEGAEGARVELYEESKPSGTWTLSKTASPGRTQAF 122
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESAL 185
E+ LF +NEM D V+ A+ +G +G+ YV+ T R LG F+DD F +ES L
Sbjct: 123 EEELFRSNEMSDAAVVCAVRAT---SGGGVGVAYVNATTRELGACAFVDDEQFCTLESVL 179
Query: 186 VALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVE 245
+G KEC++P E +++ E + LRD + RCG + TER EF DL DLDRL++G+VE
Sbjct: 180 CQMGAKECVVPKEGLETPEGRRLRDVVARCGALATERPSREFDVLDLESDLDRLIKGNVE 239
Query: 246 PVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE 305
R ++ A L A+L ++E+L+D +N+G + Y YMRLD++A+RALN
Sbjct: 240 AHRAVIDQPNSA-ACLAAVLRFSEMLADSANHGRCSLSMYDTGRYMRLDASALRALNS-- 296
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
FGL+N+ C MG+RLL WLKQPL+DV EI R D+V FV+ +R
Sbjct: 297 -----------FGLLNK-CRTPMGRRLLSRWLKQPLVDVGEIAQRHDVVHEFVNSAEVRD 344
Query: 366 DLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE 424
LR HL+ + DIER+ LE+R+A L + +LYQ+S LP++ AL++ EG+F+ I+
Sbjct: 345 ALRSAHLRSLPDIERITRKLERRKATLMDLCRLYQASAALPHMAEALERCEGRFADFIRT 404
Query: 425 RYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
+Y D L+ +D HL +F L+E +VDL ++ + EY+I +SYD L L+ +++ LE I
Sbjct: 405 KYADELKKFSDPSHLGRFEGLLEAAVDLSKIPD-EYVICASYDAELGELQKQKDVLEEDI 463
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
S + DL + DK LKL+ G R+TKK+E +RKKL+ + +LE +KDG K
Sbjct: 464 RSAFADASKDLGMERDKQLKLEHNNMHGWFMRLTKKDETSVRKKLSVSYQILEAKKDGTK 523
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
FTN KL+ L +Q + Y+ Q+ LV RV+ A +FSE+F +++ M +E+DVL+SFA+
Sbjct: 524 FTNKKLRALSEQRVALDRSYEAKQRHLVERVVDVAASFSEVFLNVSAMAAEIDVLVSFAE 583
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGP 664
+A S P P+ RP + I LE RHP VEAQD V FI N C + +G+SWFQIITGP
Sbjct: 584 VAVSAPVPFVRPIMQEKSSDTIHLENCRHPNVEAQDNVRFIANTCSMKKGESWFQIITGP 643
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NMGGKSTFIRQVGV +L+AQ+GSFVPCD A+I+VRD IFARVGAGDCQLRG+STFM EML
Sbjct: 644 NMGGKSTFIRQVGVCVLLAQIGSFVPCDEATIAVRDAIFARVGAGDCQLRGISTFMAEML 703
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
ETA+ILK AT SL+IIDELGRGTSTYDGFGLAWAI EH+V EI+AP +FATHFHELTAL
Sbjct: 704 ETAAILKAATPSSLVIIDELGRGTSTYDGFGLAWAISEHIVNEIQAPCMFATHFHELTAL 763
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
K GVAN+HV A ID SRKLTMLY+++PGACDQSFGIH AEFA FPE
Sbjct: 764 ----------KGASGVANFHVEALIDQASRKLTMLYQIKPGACDQSFGIHCAEFARFPEE 813
Query: 845 VVTLAREKAAELEDFTPSAVISDDAKI-EVGSKRKRISD-PNDMSRGAARAHQFLKEFSD 902
V+ +AR+KA ELEDF+ A + E +KR+R + +DM+RG RA QFL +F+
Sbjct: 814 VLKVARQKAEELEDFSKEGAERAVADVSEPNAKRQRGEEVSDDMARGVIRARQFLSDFAA 873
Query: 903 MPLETMDLKEALERVKRMKDDLEKDAGDCCWL 934
+PLE M EA+ R +++K +LE DA WL
Sbjct: 874 VPLERMSPAEAVARARQLKAELESDAAHNSWL 905
>gi|384248011|gb|EIE21496.1| DNA mismatch repair protein [Coccomyxa subellipsoidea C-169]
Length = 909
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/955 (47%), Positives = 622/955 (65%), Gaps = 65/955 (6%)
Query: 1 MDDEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYH 60
M+D + PEL D + GF++++K L + VRFFDR+D+Y+ HGENA FIA+T+Y
Sbjct: 1 MEDPLLEAPELSKDDRSDNGFVNWFKALNQEPTLVRFFDRKDFYSVHGENALFIARTFYK 60
Query: 61 TTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPG 120
TT ++ +G + L V+++KN+FET R LL+E +++++++EGSG+ WR + +PG
Sbjct: 61 TTAVVKYMGGSATGLPGVTLNKNLFETAVRHLLVESAEYSVQMFEGSGTQWRKTREASPG 120
Query: 121 NLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
LG++E+ LF N +M D PV+ AL + E T+G+ + D R LG EF DD +F
Sbjct: 121 KLGAFEEELFRNVDMTDVPVVAALLLGYSEGARTVGIAFADAAGRRLGACEFADDEYFCA 180
Query: 181 VESALVALGCKECLLPTE---AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLD 237
E+ L+ LG KE +LP E A +S++ LRD + RC + +ER + F TR+L QDL
Sbjct: 181 TEAVLLQLGAKEVVLPKESEAAAQSADAGRLRDVVARCNALGSERPRAAFGTRNLEQDLG 240
Query: 238 RLVR-GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
RL+R G+VE RD++ +A AL A+++++++++ +S +G + + Y YMRLD A
Sbjct: 241 RLLRSGNVEQHRDVLER-PLASAALAAVIAFSDVMAVDSGHGKWSLALYDTGRYMRLDVA 299
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A RALNV++ +TDAN +FSL+GLMN+ TA M KRLL +WLKQPL+D+ EI R DIV+A
Sbjct: 300 AQRALNVMKQRTDANDSFSLYGLMNKGRTA-MAKRLLKVWLKQPLVDLTEITERHDIVEA 358
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F +D LR+ LR HL+ + DIERL LE+++A L + +LY++S RLP + A + ++
Sbjct: 359 FAEDPTLRERLRNLHLRGLPDIERLTRKLERKKATLADMCQLYRASSRLPMMEEAFRDHD 418
Query: 416 GQFSSLIKERYLDPLESLT-------DDDHLNKFIALVETSVDLDQLENGEYMISSSYDT 468
G + L+ RY L + DD+HL KF L+E ++DLD++ + EY+I +SYD
Sbjct: 419 GPHAQLLATRYSLALWHIAAWPSTAHDDEHLAKFEELLEAAIDLDRIPD-EYLICASYDA 477
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD----KGTQFGHVFRITKKEEPK 524
L L+ E++ +E I+ + + A DL L +DK +KL+ T+ RIT+ EE K
Sbjct: 478 DLQGLREEKDKVEATINKVAEDAADDLGLIMDKTIKLEWHKVANTRM-RCLRITQTEEKK 536
Query: 525 IRKKLTT-QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
+RKKL + +++ LETRKDG KFTN LK+ ++ Q + Y Q LV +V+ A TF+
Sbjct: 537 VRKKLQSGRYMTLETRKDGTKFTNRPLKEAAERLQAISRSYDQRQHALVEQVVSVAATFA 596
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN 643
E+++ +A M++E+D+L FA+LA P PY RP + P D ++ L RHPCVEAQD V
Sbjct: 597 EVWEGVAGMVAEMDLLAGFAELAVCAPLPYVRPTMLPADSSELKLTACRHPCVEAQDGVE 656
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
FI NDC + RGKSWFQ+ITGPNM GKST+IRQVGV +LMAQVG FV C+ A I+VRDCIF
Sbjct: 657 FIANDCHMERGKSWFQVITGPNMAGKSTYIRQVGVAVLMAQVGCFVACEHARIAVRDCIF 716
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
ARVGAGDCQLRG+STFM EMLETA+ILKGA+ +SL+IIDELGRGTSTYDGFGLAWAI EH
Sbjct: 717 ARVGAGDCQLRGISTFMAEMLETAAILKGASAKSLVIIDELGRGTSTYDGFGLAWAISEH 776
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
L++EI PTLFATHFHELTAL + VGVAN HV ID S KLTMLY+V
Sbjct: 777 LMQEIGCPTLFATHFHELTAL----------QGPVGVANKHVETAIDEASGKLTMLYQVT 826
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
GACDQSFGIHVAEFA FP VV LA+ KAAELEDF+ A
Sbjct: 827 EGACDQSFGIHVAEFARFPPEVVELAKRKAAELEDFSAPA-------------------- 866
Query: 884 NDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
+EFS +PL+ ++ +EA R + + L DA LQ+
Sbjct: 867 --------------QEFSALPLDKLEPEEATARAQALYKQLLADAAQMPTLQRLL 907
>gi|303274132|ref|XP_003056389.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462473|gb|EEH59765.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 978
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/963 (44%), Positives = 615/963 (63%), Gaps = 68/963 (7%)
Query: 10 ELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
+L + +GF+S++++LP+D +R F +++++ HGE+A F+A+ +Y+TTT +R +G
Sbjct: 15 DLSFNENDKKGFISYFRSLPDDKNVLRIFKVKEFFSVHGEDANFVARNFYNTTTVVRYIG 74
Query: 70 TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG-SNWRLVKSGTPGNLGSYEDV 128
G AL V+ +++MFET+ R +LL+ D ++ELYE S W+LV++ +PG L ++E+
Sbjct: 75 HGESALPGVTFNRSMFETVIRTVLLDVNDRSVELYEDSPRQGWKLVRTASPGRLCAFEEE 134
Query: 129 LFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVAL 188
L+ +E+ DTPV+ A+ R + +G+ Y +LT R LG EF+DD HF +E+ + L
Sbjct: 135 LYCASELVDTPVVTAVRIAIRHDQRLVGVAYANLTTRELGACEFVDDEHFCTLEAVICQL 194
Query: 189 GCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPV- 247
G KECL+P E++ + E K LR + RCG + T R+ ++F +R+L DL+RL+ P+
Sbjct: 195 GTKECLMPRESMATPEGKVLRHIVERCGALATGRRTSDFDSRNLESDLERLLVAERTPMS 254
Query: 248 -------------RDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
R L+ E A L A+L ++EL +D N+G + + YMRLD
Sbjct: 255 AGTAAATAEVELHRSLLEK-EGAAATLAAVLRFSELATDPINHGRCTLVTHDTGRYMRLD 313
Query: 295 SAAMRALNVLESKTDANK-----------NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
S+A+RALNVL K + +FS++GL+NR C+A MG+RLL WLKQPL+D
Sbjct: 314 SSALRALNVLPEKASISSAAPSAAAETAGSFSIYGLLNRCCSA-MGRRLLLRWLKQPLVD 372
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
EI+ R D+V+A VDD R LR+ HL+ + D+ERL LE+RRA L + +LYQ+S
Sbjct: 373 AEEISGRHDVVEALVDDPEARDTLRRVHLRSLPDMERLTRKLERRRATLLDLCRLYQAST 432
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMI 462
+P+I + + ++ ++ RY L L D++HL +F AL+E +VDLD++ + EY++
Sbjct: 433 AIPHIAEVCVRMKDRYGLMMSSRYSSALLKLHDEEHLGRFEALLEAAVDLDRIPD-EYVV 491
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
S SYD L LK +++ ++IH + + +A DL PVDK LKL+ G R+TKK+E
Sbjct: 492 SPSYDEELGKLKKLKDAASQEIHKVFESSAEDLCTPVDKVLKLEHNNMHGWYLRLTKKDE 551
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTF 582
+RKKL + VLE +KDG KFTN +L+ L + + Y + Q++LV R++ A +F
Sbjct: 552 VTVRKKLLANYQVLEAKKDGTKFTNKQLRALSCKRTDLDRMYASQQRQLVERIVDVASSF 611
Query: 583 SEIFKSLATMLSELDVLLSFADLASSCPTPYTRP------DINPPDVGDIILEGSRHPCV 636
+++F ++ + +E+DVL SFA++A S P P+ RP +I D +I L GSRHPC+
Sbjct: 612 ADVFLHVSAICAEVDVLTSFAEVAISAPEPFVRPTMTAKKNIFEADTREIYLGGSRHPCI 671
Query: 637 EAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
EAQ+ FI N CKL +G SWFQIITGPNMGGKSTFIRQVGV I+MAQVGSFVPC+ A I
Sbjct: 672 EAQEGSQFIANTCKLEQGNSWFQIITGPNMGGKSTFIRQVGVCIIMAQVGSFVPCNMAKI 731
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
++RD IFARVGAGDCQLRG+STFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGL
Sbjct: 732 AIRDAIFARVGAGDCQLRGISTFMAEMLETSAILKSATSSSLIIIDELGRGTSTYDGFGL 791
Query: 757 AWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
AWAI +H+ I+AP LFATHFHELTA+ GV+N HV A I SRKL
Sbjct: 792 AWAISQHISNNIKAPCLFATHFHELTAIQSPE----------GVSNLHVDAKISMESRKL 841
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKI----- 871
TMLY++ PGACDQSFGI AEFA FP V+ +A+EKA EL++F+ V + + K
Sbjct: 842 TMLYRLLPGACDQSFGIQCAEFARFPADVLRIAQEKATELDNFS---VNTSEVKYTSLDQ 898
Query: 872 -------EVGSKRKRISDPND-------MSRGAARAHQFLKEFSDMPLETMDLKEALERV 917
+ +KRKRI D + S+ + R QFL +F +PL E L R+
Sbjct: 899 HYGPRGGDESAKRKRIDDQEEKTPEEKVRSQNSIRVRQFLADFMALPLHEYPPAEVLCRL 958
Query: 918 KRM 920
++M
Sbjct: 959 QQM 961
>gi|320168930|gb|EFW45829.1| Msh2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 909
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/915 (44%), Positives = 581/915 (63%), Gaps = 66/915 (7%)
Query: 6 NKLPELKLDAKQARGFLSFYKTLP---------------------NDTRAVRFFDRRDYY 44
N+ +++LD + +GFLSFY+ LP VR FDR+DYY
Sbjct: 13 NQQSQIELDNRTEQGFLSFYRGLPEARCRCCMSFCQCCGFSRQTCKSATTVRIFDRQDYY 72
Query: 45 TAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELY 104
+ HG++A +AK +YHT ++ +GT + V++S+ MFETI R+LLL R + +E+Y
Sbjct: 73 SVHGDDAVLVAKEFYHTLAVIKHIGT----VPYVTMSQLMFETILRELLLLRQNR-VEVY 127
Query: 105 E---GSGSN-WRLVKSGTPGNLGSYEDVLF-ANNEMQDTPVIVALFPNFRENGCTIGLGY 159
G SN W L + G+PGNL +ED+LF N+EM + V++A+ + +G+ +
Sbjct: 128 AREGGKNSNAWVLSRRGSPGNLQQFEDMLFTGNSEMSTSAVVMAIKLGVDDGNRMVGVSF 187
Query: 160 VDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVML 219
D T+R + + +F D+ F+N+E+ V + KECL +EA S++C +R L R G+++
Sbjct: 188 ADATQRTISVCQFADNDQFSNLEALTVQISAKECLFTSEA-GSADCARVRVVLERGGILV 246
Query: 220 TERKKTEFKTRDLVQDLDRLVR------GSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
T+RK+ +F ++DLVQDL+RL+R + P DLV G + AL+ Y ELLSD
Sbjct: 247 TDRKRADFASKDLVQDLNRLLRLPESTSAASLPEMDLVYGM----ASTAALVKYLELLSD 302
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA-NKNFSLFGLMNRTCTAGMGKRL 332
SN+G + I+ + L YMRLD+AA+RALN++ S D NK +L GL+N+ C G+RL
Sbjct: 303 ASNFGQFRIKPFDLGQYMRLDAAAVRALNLVASPLDGGNKTMNLTGLLNK-CKTAQGQRL 361
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGL 391
L W+KQPL ++ +I RL+IV+ +++ LR L++ HL+R+ D+ R+ ++ +A L
Sbjct: 362 LAQWVKQPLTNLAQIEERLNIVELLAENSDLRVALQEDHLRRMPDLHRISKRFQRGKATL 421
Query: 392 QQIVKLYQSSIRLPYIRSALQQY--EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
Q V+LYQ +RLP +R+AL+ Y Q+ +++ ER+++ L + D K LVET+
Sbjct: 422 QDCVRLYQVCVRLPALRTALEGYVNHAQYGAIVSERFVNSLGEIIAD--CAKLEELVETT 479
Query: 450 VDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
+DL++ E E++I ++D L+AL+ + + + QIH A DL L +K LKL+
Sbjct: 480 IDLERTEQHEFVIKPTFDERLAALRAQSDEIGSQIHQQLNIAARDLSLEPNKVLKLENNA 539
Query: 510 QFGHVFRITKKEEPKIR--KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNC 567
QFG+ FR+++ +E +R KK TT ++T+KDGV+F + KL+ L D++ ++ ++Y +
Sbjct: 540 QFGYFFRVSRAQEAALRTSKKYTT----IDTKKDGVRFVSPKLRALNDEFAQLKKDYDDI 595
Query: 568 QKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII 627
Q L VI+ A + E + L +++ELDV SFA ++ S PTPY RP ++ G+I
Sbjct: 596 QSTLATEVIKVAGGYCEPLELLNALVAELDVFASFAHISVSAPTPYVRPVVSAKGEGNIR 655
Query: 628 LEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
L G+RHPC+E QD V FI ND L+RGKS QIITGPNMGGKST+IRQVGV +L+AQ+G
Sbjct: 656 LFGARHPCLEVQDDVAFIANDVALVRGKSELQIITGPNMGGKSTYIRQVGVVVLLAQIGC 715
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVPC A + + D I ARVGAGD QL+GVSTFM EMLETASILK A+ SLIIIDELGRG
Sbjct: 716 FVPCASAEVCIVDSILARVGAGDSQLKGVSTFMAEMLETASILKSASKDSLIIIDELGRG 775
Query: 748 TSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSA 807
TSTYDGFGLAWAI EH+ +I LFATHFHELTALA + V+N HVSA
Sbjct: 776 TSTYDGFGLAWAISEHIATKIHGFCLFATHFHELTALA---------DTVPTVSNLHVSA 826
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
D+ + LT+LY+V PG CDQSFGIHVA+ A+FP VV +A+ KA ELEDF D
Sbjct: 827 LTDNGT--LTLLYRVRPGVCDQSFGIHVAQMADFPTKVVEMAKRKALELEDFQGHDHGDD 884
Query: 868 DAKIEVGSKRKRISD 882
A + +KR R+ D
Sbjct: 885 SANVGGDAKRMRMMD 899
>gi|412993592|emb|CCO14103.1| DNA mismatch repair protein msh-2 [Bathycoccus prasinos]
Length = 1006
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/997 (41%), Positives = 612/997 (61%), Gaps = 92/997 (9%)
Query: 18 ARGFLSFYKTLPNDT--------------------RAVRFFDRRDY--YTAHGENATFIA 55
A GF+ FY+T + ++RFF+R + ++ ++A ++A
Sbjct: 18 ASGFVRFYETTFTNVFSKKNDDDDKKESEEEEKQHHSLRFFNRSKHEGWSVCADDAFYVA 77
Query: 56 KTYYHTTTALRQL----GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEG---SG 108
+ +Y TTT ++ L G L SV++++N+FETI RD+LL + T+E+YE S
Sbjct: 78 RRFYKTTTVVKYLKDAGGNSQFILPSVNINQNLFETICRDVLLHTRERTVEVYESEPNSR 137
Query: 109 SNWRLVKSGTPGNLGSYEDVLFANNE----------------MQDTPVIVALFPNFRENG 152
+++L K G+PGN+ +ED+LF ++ P++ A+ ++
Sbjct: 138 GDFKLTKRGSPGNVLDFEDILFDGSKENDLNNNNNKNNANADTDSLPIVCAVKCVLKQEQ 197
Query: 153 CTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSS------ECK 206
IGL + + + R L EF D+ +ES L + +E ++P E K+S + K
Sbjct: 198 RRIGLAFFEYSTRTLRALEFSDEERLGQLESILAQINAREVIVPNEIDKASGGAMTADAK 257
Query: 207 TLRDALTRCGVMLTERKKTE-FKTRDLVQDLDRLVRG--SVEPVRDLVSGFEIAPGALGA 263
+ D + RC M T + +E F+T D+ DL RL++ +V+ R+++ +A L A
Sbjct: 258 RIADVIDRCDAMRTAKANSEYFRTDDVEDDLKRLLKSGDNVQAHRNVLD-LPLAVQCLHA 316
Query: 264 LLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK-------------TDA 310
++ +A++ +D N+G + + +++RLD+AA++ALNVL S +
Sbjct: 317 VMKFADIGNDAQNHGRCELELFDSGAHVRLDAAALKALNVLPSSGGGGDRSFGETAGKGS 376
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ- 369
FSL+ L+NR CT+ MGKR+L+ WLKQPL+ V +I+ R D+V+ F +++ALR LR
Sbjct: 377 GGGFSLYNLLNR-CTSPMGKRVLYRWLKQPLVSVEKISERHDVVETFSEESALRDSLRNA 435
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFS-----SLIKE 424
HLK + D+ERL LEK++ L + KLYQ+S +P+ L++ FS +L
Sbjct: 436 HLKSLPDVERLARKLEKKKTTLMDLCKLYQASSAIPHAIDCLERI--PFSDETRKALFIS 493
Query: 425 RYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
+Y+ PL+ +++ L KF AL+E +VDL+++ + EY+IS+ +D L+ L+ ++ S E +I
Sbjct: 494 KYISPLKECVEEEKLGKFEALIEHAVDLNKIPD-EYVISAEFDDTLALLEQQKISTEEEI 552
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT--TQFIVLETRKDG 542
+ + ++ A DL + DK LKL+K Q G+ FR+TKK+E R KL+ QF +LE +KDG
Sbjct: 553 NVVWQEAAEDLTMERDKQLKLEKNNQHGYFFRLTKKDETAARSKLSKSAQFQILEAKKDG 612
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
KFTN KL+ L + ++ Y+ QK LV RV+ AV+F +IF +++++ELDVL +F
Sbjct: 613 SKFTNKKLRALSQKRLEIDRTYEAKQKHLVQRVLDVAVSFVDIFLKASSVMAELDVLCAF 672
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQII 661
A++A + PTPY RP + D +++L SRHP VE Q+ F+ N CK+I+G+SWFQII
Sbjct: 673 AEVAQNAPTPYVRPQMTNADEKELVLLDSRHPLVEVQESCGEFVQNSCKMIKGESWFQII 732
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKSTFIRQVGVN+L+AQVGSFVPC +A I VRD IF R+GAGD QLRGVSTFM
Sbjct: 733 TGPNMGGKSTFIRQVGVNVLLAQVGSFVPCSKAIIPVRDAIFCRIGAGDFQLRGVSTFMA 792
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EMLE+ASIL+ AT++SL+IIDELGRGTSTYDGFGLAW I EHL E++AP LFATHFHEL
Sbjct: 793 EMLESASILRSATEKSLVIIDELGRGTSTYDGFGLAWGIAEHLANEVKAPCLFATHFHEL 852
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T L E GV N+HVSA ID S+K+ MLY +E GACDQSFGIH AEF+ F
Sbjct: 853 TELKGE----------TGVKNFHVSAKIDVASKKIAMLYALEEGACDQSFGIHCAEFSGF 902
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFS 901
P + AR+ A ELE+ SA +DD + S + D D + G RA QFL +F
Sbjct: 903 PAEALEDARKCAEELENGGNSAG-NDDKENTTNSNKSDGIDDADATYGRKRAMQFLNDFK 961
Query: 902 DMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQFF 938
++PL + ++ +ERVK++K +LE+DA WLQ F
Sbjct: 962 NIPLPQLAPQDVIERVKKLKTELERDASKSKWLQNVF 998
>gi|291240666|ref|XP_002740239.1| PREDICTED: mutS homolog 2-like [Saccoglossus kowalevskii]
Length = 929
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/932 (43%), Positives = 596/932 (63%), Gaps = 41/932 (4%)
Query: 10 ELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
+L LD Q +GFLSF++++ P+ T R FDR +YYT HG +A F AK + TT ++
Sbjct: 8 QLSLDFVQEQGFLSFFRSMSEKPDTT--FRVFDRTEYYTCHGSDAVFAAKEVFKTTGVIK 65
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE--GSGSN--WRLVKSGTPGNL 122
LGTG+ + SV +SK FE++ +DLLL R + +E+Y+ G G N W L +PGNL
Sbjct: 66 YLGTGTKKVESVVLSKMNFESLVKDLLLVR-QYRVEVYKNKGGGKNNDWTLEFKASPGNL 124
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
+E++LF N+M + ++A+ IG + D T R +G+ EF D+ F+N+E
Sbjct: 125 TQFEEILFGANDMSTSACVLAVKMAMDGGHKIIGAAFADATLRKMGVCEFPDNDQFSNLE 184
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
+ +V +G KEC+LP+ E L+ L R G+++T+RKK+++ T+D VQDL+RL++
Sbjct: 185 ALVVQIGPKECILPS-GDSGPEMNKLKQILERSGLLITDRKKSDYNTKDNVQDLNRLLKF 243
Query: 243 SVEPVRDLVSGFEI----APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
E + + E+ A +L AL+ Y ELLSDESN+G + + + L YMRLD+AA+
Sbjct: 244 KKEDQANSSALAEMEKTHAMSSLSALIKYLELLSDESNFGQFQLTTFDLSQYMRLDAAAV 303
Query: 299 RALNVLESKTDA-NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
RALN+L S D NK+ L GL+N+ C G+RLL W+KQPL+D N+I RL+IV+A
Sbjct: 304 RALNLLPSTLDGGNKSMCLLGLLNK-CRTPQGQRLLAQWVKQPLMDKNKIEERLNIVEAI 362
Query: 358 VDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
+D LRQ L LKR+ D +RL ++++A LQ ++YQ+ +P++ L+++ G
Sbjct: 363 FEDNELRQTLLDDQLKRVPDFQRLAKKFQRKKATLQDCYRVYQAVEYMPHLLETLERHGG 422
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
+ L+ E + +PL+ + D +K+ +VET++D+ Q+E E++I +D L L+ +
Sbjct: 423 KHQMLLMEVFSNPLKEVLMD--FSKYQEMVETTLDMKQVEQHEFVIKPDFDPDLQTLREK 480
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
LE +I S K+ ++DL++ +K LKL+ +Q G+ FR+T+KEE IR ++I +
Sbjct: 481 INDLEDEIKSQLKKASTDLNVEANKVLKLESNSQLGYFFRVTRKEEKVIRN--NRKYITI 538
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
+T K+GV+FTN+ LK ++Y E Y QK +V +I A + + + + +L++L
Sbjct: 539 DTNKNGVRFTNSALKSFNEEYMLAKESYNETQKAVVMEIISIAAGYVDPMQLINEILAQL 598
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DVL+SFA ++++ P PY RP + G + L SRHPC+E QD V FIPND + K
Sbjct: 599 DVLVSFACVSANAPIPYIRPTLQAKGSGQLKLIQSRHPCLEVQDEVAFIPNDVTFDKEKE 658
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ+G FVPCD+A +++ DCI ARVGAGD QL+GV
Sbjct: 659 MFHIITGPNMGGKSTYIRQIGVVTLMAQIGCFVPCDQAELTIVDCILARVGAGDSQLKGV 718
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETASIL+ A++ SL+IIDELGRGTSTYDGFGLAWAI E++ +I+ LFAT
Sbjct: 719 STFMSEMLETASILRSASECSLVIIDELGRGTSTYDGFGLAWAISEYIATKIKCFCLFAT 778
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
HFHELT+LA + V N HVSA +T LT+LYKV+PG CDQSFGIHVA
Sbjct: 779 HFHELTSLAD---------AVPTVNNLHVSAL--TTGDTLTLLYKVKPGVCDQSFGIHVA 827
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDA---KIEVGSKRKRISDPNDMSRGAARA 893
E +FP+ V+ A++KAAELED+ S +SD A E +K++R++ G
Sbjct: 828 EMVHFPQKVIDFAKQKAAELEDYQ-SISVSDSAMEGHDEPAAKKRRVAK----EEGEKLI 882
Query: 894 HQFLKEFSDMPLETMDLKEALERVKRMKDDLE 925
FL +F ++PL +M +EA+ ++++K +++
Sbjct: 883 RGFLSKFKEIPLSSMTDEEAMAEIEKLKSEIK 914
>gi|417405309|gb|JAA49370.1| Putative mismatch repair msh3 [Desmodus rotundus]
Length = 933
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/929 (43%), Positives = 581/929 (62%), Gaps = 38/929 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+LD+ GF+ F++++P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLDSVAEFGFVRFFQSMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL + + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVQ-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+ D+ +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDASDSIGVVGVKMSTVDGQRQVGIGYVDSVQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + + LR + R G+++TERK+T+F TRD+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPGGEI-AGDMGKLRQIIQRGGILITERKRTDFSTRDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E V V ++A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGAQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDAELRQSLQEDLLRRFPDLNRLARKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ SL+ ++ P L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQSLLLAVFVTPFIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S TA DL L K +KLD +QFG+ FR+T KEE +R F
Sbjct: 484 IMDDLEKKMQSTLISTARDLGLESGKQIKLDSSSQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+ L L ++Y K EY+ Q +V +I + + E ++L +L++
Sbjct: 542 VDIQKNGVKFTNSALTSLNEEYTKNKTEYEEAQNAIVKEIINISSGYVEPMQTLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEDTLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
AE ANFP V+ A++KA ELE+F DD ++E +KR + + G +
Sbjct: 831 AELANFPRHVIECAKQKALELEEFQNIGESQDD-EMEPAAKRCYL----EREEGEKIIQE 885
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P M + ++K++K ++
Sbjct: 886 FLSKVKQIPFTEMSGENITRKLKQLKAEV 914
>gi|1079288|pir||S53609 DNA mismatch repair protein MSH2 - African clawed frog
Length = 933
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/932 (42%), Positives = 584/932 (62%), Gaps = 42/932 (4%)
Query: 10 ELKLDAKQARGFLSFYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
+L +D+ GFL FY+++P DT VR FDR DYYT HG +A F AK + T ++
Sbjct: 8 KLSMDSGAENGFLHFYQSMPEKPDT-TVRVFDRNDYYTVHGGDALFAAKEVFKTNGVIKY 66
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEG-SG------SNWRLVKSGTPG 120
LG+G+ L SV +SK FE++ +DLLL R + +E+Y+ SG ++W+L +PG
Sbjct: 67 LGSGNKKLESVVLSKMNFESVVKDLLLVR-QYRVEVYKNKSGGKYSKENDWQLAFKASPG 125
Query: 121 NLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
NL +E++LF NN+M +V + E +G+GYVD T R LG+ EF D+ F+N
Sbjct: 126 NLTQFEEILFGNNDMSTAVGVVGIKLVSSEGQRLVGVGYVDSTLRKLGVCEFPDNDQFSN 185
Query: 181 VESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
+E+ LV +G KEC++P + + LR + R G+++T+RK+ EF T+D VQDL+RL+
Sbjct: 186 LEALLVQIGPKECVMPG-GETAGDMGKLRQIVKRGGILITDRKRAEFSTKDSVQDLNRLL 244
Query: 241 RGSVEPVRDLVSGF------EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
+ + + S ++A AL A++ Y ELLSDESN+G + + + L YM+LD
Sbjct: 245 KA--KKGEQVTSAALPEMEKQVAMSALAAVMKYLELLSDESNFGQFVMTNFDLSQYMKLD 302
Query: 295 SAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
+AA+ ALN+ S D + SL GL+N+ C G+RL++ W+KQPL+D N + RL++
Sbjct: 303 NAAVGALNLFPGSAEDTSGTQSLAGLLNK-CKTPQGQRLVNQWIKQPLMDKNRVEERLNL 361
Query: 354 VQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V+AFV D LRQ L++ L +R D+ RL +++ A LQ +LYQ+ LP + A++
Sbjct: 362 VEAFVMDVELRQCLQEDLLRRFPDLNRLAKKFQRQTANLQDCYRLYQAVNHLPTVVQAIE 421
Query: 413 QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
+YEG L+ + PL L+ D +KF ++ET++D+DQ+EN E+++ +S+D L+
Sbjct: 422 KYEGTHQMLLLAVFATPLSDLSSD--FSKFQEMIETTLDMDQVENHEFLVKASFDPNLTE 479
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
L+ + + LE+ + A +L L K++KL+ +Q GH FR+T KEE +R +
Sbjct: 480 LREKMDELEKNMQGALGGAARELGLDAGKSIKLESNSQIGHYFRVTCKEEKALRN--NKK 537
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
F ++ +K+GV+FTN+KL L ++Y + EEY+ Q +V +I + + + ++L +
Sbjct: 538 FTTIDIQKNGVRFTNSKLSSLSEEYMRNREEYEEAQNAIVKEIITISAGYVDPIQTLNDV 597
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
+++LD ++SFA +++S P PY RP I G I+L +RHPC+E QD V FIPND
Sbjct: 598 IAQLDAVVSFAHVSNSAPVPYVRPVILEKGQGRIVLHSARHPCIEMQDDVAFIPNDITFE 657
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPCD A +S+ DCI ARVGAGD Q
Sbjct: 658 KEKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAQVSIVDCILARVGAGDSQ 717
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ +I+A
Sbjct: 718 LKGVSTFMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIKAFC 777
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFG 832
+FATHFHELTALA Q+ V N HV+A + + +TMLY+++ G CDQSFG
Sbjct: 778 MFATHFHELTALAD---------QVPTVNNLHVTA-LTTEDTLITMLYRIKKGVCDQSFG 827
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAAR 892
IHVAE ANFP+ V+ A+EKA ELE+F DD E KR+ + G
Sbjct: 828 IHVAELANFPKHVIETAKEKALELEEFQYVGN-PDDCDDEPARKRR----CEEKEEGEKI 882
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL +PL M +E ++K+ + D+
Sbjct: 883 IQDFLSRVKALPLTEMSEEEIKIKLKQFRADV 914
>gi|255070289|ref|XP_002507226.1| predicted protein [Micromonas sp. RCC299]
gi|226522501|gb|ACO68484.1| predicted protein [Micromonas sp. RCC299]
Length = 963
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/962 (42%), Positives = 593/962 (61%), Gaps = 64/962 (6%)
Query: 13 LDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGS 72
LD +GF++FY++LP D + +R F R+D Y+ HG+NA IA+T+ TTTAL LG G
Sbjct: 11 LDESDRKGFVAFYRSLPADPKIIRIFSRKDNYSVHGDNAVLIARTFLKTTTALHYLGHGE 70
Query: 73 DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-WRLVKSGTPGNLGSYEDVLFA 131
AL +++++N+FE+I R+LLL+RT+H +ELYE + W+L ++ +PG L ++E+ L
Sbjct: 71 SALPGLTLNRNLFESILRELLLDRTEHLVELYEETSRQVWKLSRTASPGKLDAFEEELNR 130
Query: 132 NNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCK 191
++++ DTP + A+ R + +G Y + R G EF+DD +E+ + LG K
Sbjct: 131 SDDLFDTPAVAAVQVKVRMDQQHVGFAYFNPVTRHFGACEFVDDDQLRILEATICQLGIK 190
Query: 192 ECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV-RGSVEPVRDL 250
EC+L +A+++ + LRD ++RCG + ++R ++F L DL L+ + E +R +
Sbjct: 191 ECVLQLQAIETPNGRRLRDLISRCGALASQRATSDFDINHLEHDLSCLLAHEASENIRTV 250
Query: 251 VSGFEIAPGALG-----ALLS-------------YAELLSDESNYGNYYIRKYSLDSYMR 292
AP A A+L+ +++ L+D ++ G + + Y+R
Sbjct: 251 --NVVNAPNAAALEHHRAILTKELAAGALAATLRFSDALADSNHRGRCTLALHDTGKYVR 308
Query: 293 LDSAAMRALNVLESK-----------TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
LDS+A+ ALNVL + DA NFSL+ L+N+ C MG+R+L WLKQPL
Sbjct: 309 LDSSALSALNVLPERRVLSPSTASAAADAISNFSLYDLLNK-CRCPMGRRMLFRWLKQPL 367
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQS 400
LD EI R D+V+AFV++ +R LR HL+ + DI R+ +E+RRA L + KLYQ+
Sbjct: 368 LDTVEIGRRHDVVEAFVNNPEVRDALRGTHLRALPDIHRITRRIERRRANLADLCKLYQA 427
Query: 401 SIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
S LPYI A+ Q + S +++ Y D L L+D+DHL K+ AL+E ++DL+++ EY
Sbjct: 428 SAALPYIAGAVSQIDTCHSRALRDMYTDKLIKLSDNDHLGKYEALIEAAIDLNKIPE-EY 486
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+I +SYD L L+ +++ + + A DL + KALKL+ +G R+TKK
Sbjct: 487 VIDASYDLDLEILQKRKDAANEDLQKAFQDAADDLRMQAGKALKLESNNMYGWYLRLTKK 546
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+E +R++L+ + +LE +KDG KFTN +L L + ++ + Y+ Q+ LV+RV+ A
Sbjct: 547 DETTVRRQLSASYQILEAKKDGTKFTNKRLHSLSSKCMELDKAYECQQRVLVDRVVDVAA 606
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG------DIILEGSRHP 634
+F ++F ++ + +E+DVL SFA++A S P P+TRP ++P +IIL+ SRHP
Sbjct: 607 SFVDVFLEVSNLCAEIDVLASFAEVAVSAPLPFTRPSVHPKQSNADSIREEIILKDSRHP 666
Query: 635 CVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
C+E Q V F+ N C L RGKSWFQ+ITGPNMGGKSTFIRQVG+ +LMAQVGSFVPC A
Sbjct: 667 CMELQHGVQFVSNTCTLQRGKSWFQLITGPNMGGKSTFIRQVGICVLMAQVGSFVPCAEA 726
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
I+VRD I+ARVGAGD QLRG+STFM EMLET +I+K AT SLIIIDELGRGTSTYDGF
Sbjct: 727 KIAVRDAIYARVGAGDSQLRGISTFMAEMLETTAIIKAATPSSLIIIDELGRGTSTYDGF 786
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
G+AWAI E+++ ++AP LFATHFHELTAL + +GV NYHV A ID S
Sbjct: 787 GVAWAISEYIMRNVKAPCLFATHFHELTAL----------QGPLGVTNYHVDAEIDERSG 836
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA---VISDDAKI 871
KLTMLY V PG DQSFGI AE+A FPE V+ AREKA ELEDF+ A S + +
Sbjct: 837 KLTMLYCVSPGVSDQSFGIECAEYAKFPEQVIKNAREKALELEDFSAKATAFAASKNTCL 896
Query: 872 EVG-SKRKRISDPNDMSRGAAR--------AHQFLKEFSDMPLETMDLKEALERVKRMKD 922
E KR S + + A R A FL F + L+ + ++ KRMK
Sbjct: 897 EASLLGMKRSSSDHRLRDTAGRAVVSQTLTATLFLDSFCTVHLDKLSKEDIFHHTKRMKK 956
Query: 923 DL 924
+L
Sbjct: 957 EL 958
>gi|47087243|ref|NP_998689.1| DNA mismatch repair protein Msh2 [Danio rerio]
gi|28278396|gb|AAH44370.1| MutS homolog 2 (E. coli) [Danio rerio]
Length = 936
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/932 (42%), Positives = 593/932 (63%), Gaps = 45/932 (4%)
Query: 11 LKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
L +D+ GFL+FY ++ P+ T VR FDR DYYT HG++A F AK + T ++
Sbjct: 9 LSMDSASEHGFLNFYFSMSDKPDTT--VRVFDRNDYYTVHGKDAIFAAKEVFKTNGVIKN 66
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS-----NWRLVKSGTPGNL 122
LG+G+ L SV +SK FE+ RDLLL R + +E+Y+ + +W++ +PGNL
Sbjct: 67 LGSGNRRLESVVLSKMNFESFVRDLLLVR-QYRVEVYKNASKSSKEHDWQIAFKASPGNL 125
Query: 123 GSYEDVLFANN--EMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFT 179
+E++LF + + +V + +G +G+GYVD T R LG+ EF D+ F+
Sbjct: 126 TQFEEILFGSGGGPAEGAVGVVGVRLGTGTDGQRVVGVGYVDSTLRKLGVCEFPDNDQFS 185
Query: 180 NVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
N+E+ LV +G KEC+LP + K L+ + R G++LT+RKK+EF T+D+VQDL+RL
Sbjct: 186 NLEALLVQIGPKECVLPAGDSGGDQGK-LKQVVQRGGILLTDRKKSEFTTKDIVQDLNRL 244
Query: 240 VRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
++ +V +IA L A++ Y ELL+DE+N+G++ + + L+ YMRLD+
Sbjct: 245 LKARKGETVSSAALPEMEKKIAMSCLEAVIKYLELLADEANFGSFKMTTFDLNQYMRLDN 304
Query: 296 AAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
AA++ALN+ + S DA SL GL+N+ C G+RL++ W+KQPL+D N+I RLD+V
Sbjct: 305 AAVQALNLFQGSSDDATGTHSLAGLLNK-CRTPQGQRLVNQWIKQPLIDKNKIEERLDLV 363
Query: 355 QAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+ FV+D+ LR+ ++ L +R D+ R+ +++ + LQ ++YQS +LP + AL++
Sbjct: 364 ETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQSVGQLPNVVLALER 423
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
Y G+ L+ ++ PL L D +KF ++ET++D++Q+E+ E+++ S+D LS L
Sbjct: 424 YSGKHQVLLHAAFISPLNDLISD--FSKFQEMIETTLDMNQVEHHEFLVKPSFDPTLSDL 481
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ + LE+ + + A +L L K +KL+ Q G+ FR+T KEE +R +F
Sbjct: 482 RENMDRLEKAMQAALSSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRN--NKKF 539
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
L+ +K+GV+FTN+KL L ++Y K EEY+ Q +V +I A + + ++L ++
Sbjct: 540 TTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVI 599
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
++LD +LSFA ++ + P P+ RP I G ++L+ +RHPCVEAQD V FIPND IR
Sbjct: 600 AQLDAVLSFAVVSHAAPVPFIRPKILEKGSGRLVLKAARHPCVEAQDEVAFIPNDVTFIR 659
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
G+ F IITGP+MGGKST+IRQVGV +LMAQ+G FVPCD A +SV DC+ ARVGAGD Q+
Sbjct: 660 GEKMFHIITGPSMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQI 719
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+GVSTFM EMLETA+IL+ AT+ SLI IDELGRGTSTYDGFGLAWAI E++ +++ L
Sbjct: 720 KGVSTFMAEMLETAAILRSATEDSLITIDELGRGTSTYDGFGLAWAISEYIATRLKSFCL 779
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHELTALA +Q+ V N HV+A +T LTMLYKV+ G CDQSFGI
Sbjct: 780 FATHFHELTALA---------QQVPTVRNLHVTAL--TTDSTLTMLYKVKKGVCDQSFGI 828
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSK-RKRISDPNDMSRGAAR 892
HVAE A+FP+ V+ AREKA ELE+F + + ++A G K +KR + + G
Sbjct: 829 HVAELASFPKHVIANAREKALELEEFQDISSVGEEA----GPKAKKRCMEKQE---GERI 881
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + MP++ M K E ++++K ++
Sbjct: 882 IEAFLAKVKSMPVDGMSDKAVKEELRKLKAEV 913
>gi|334312805|ref|XP_001382178.2| PREDICTED: DNA mismatch repair protein Msh2 [Monodelphis domestica]
Length = 934
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/933 (42%), Positives = 581/933 (62%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L +D++ F+ F++ LP VR FDR DYYTAHGE+A A+ + T ++ +G
Sbjct: 9 LAMDSQAECSFVRFFQALPAKPLTTVRLFDRGDYYTAHGEDALLAAREVFKTQAVIKYIG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
TGS L SV +SK FE+ ++DLLL R + +E+Y+ N W + +PGN
Sbjct: 69 LTGSKKLESVVLSKMNFESFSKDLLLVR-QYRVEVYKNKAGNKATKENDWHVAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +E++LF NN+M + V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEEILFGNNDMSCSIGGVGVKLSIVDGQRLVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL-- 239
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F +D+VQDL+RL
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQVIERGGILITERKKVDFAAKDIVQDLNRLLK 246
Query: 240 ------VRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
V +V P + ++A +L A++ Y ELLSD+SN+G + + + L YM+L
Sbjct: 247 SKKGDQVNSAVLPEME----NQVAISSLSAVIKYLELLSDDSNFGQFELTTFDLSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D+AA+RALN+ + S D + SL L+N+ C G+RLL+ W+KQPLLD N I RL+
Sbjct: 303 DNAAVRALNLFQGSAEDKSGTQSLAALLNK-CKTPQGQRLLNQWIKQPLLDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV D LRQ L++ L +R D+ R ++ A LQ ++YQ+ +LP + AL
Sbjct: 362 LVEAFVVDAELRQSLQEDLLRRFPDLHRFAKKFQRHAANLQDCYRMYQAINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D++Q+EN E+++ +S+D L+
Sbjct: 422 EKHEGKHQMLLLAIFVTPLTDLHSD--FSKFQEMIETTLDMNQVENHEFLVKASFDPHLT 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ ++LE+++ S A +L + K +KLD Q G+ FR+T KEE +R
Sbjct: 480 QLRESIDNLEKKMQSSLTSAARELGIEAGKHIKLDSNAQLGYYFRVTCKEEKVLRS--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F L+ +K+GVKFTN+KL D+Y K+ +EY+ Q +V +I + + E ++L
Sbjct: 538 NFNTLDVQKNGVKFTNSKLAAFNDEYLKIRDEYEEAQDAIVKEIINISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA++A+ P PY RP I G IIL+GSRH CVE QD V FIPND
Sbjct: 598 VLAQLDAVVSFANVANGAPIPYVRPVILEKGQGRIILKGSRHACVEVQDEVAFIPNDINF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGDC
Sbjct: 658 EKNKQTFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDC 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
Q++GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QMKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA Q+ V N HVSA +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALA---------DQLPTVNNLHVSAL--TTDEALTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F + ++E +KR ++ +G
Sbjct: 827 GIHVAELANFPKHVIENAKQKALELEEFQHFGKPQESDEMEPATKRCY----HEREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + ++P M ++K++K ++
Sbjct: 883 IIQTFLAKVKELPFAEMSEDGIRTKLKQLKAEV 915
>gi|405960469|gb|EKC26394.1| DNA mismatch repair protein Msh2 [Crassostrea gigas]
Length = 915
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/923 (42%), Positives = 584/923 (63%), Gaps = 41/923 (4%)
Query: 13 LDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTG 71
+DA Q +GF+S +K+LP + VRFFDR DYYT HG++A F+AK + T ++ LG G
Sbjct: 1 MDAFQDQGFISAFKSLPEKPSTTVRFFDRTDYYTVHGQDAVFVAKEVFKTVAVIKYLGAG 60
Query: 72 SDALSSVSVSKNMFETIARDLLLERTDHTLELYE---GSGSN-WRLVKSGTPGNLGSYED 127
L SV+VSK FE++ ++LLL R + +E+++ GS +N W L +PGNL +ED
Sbjct: 61 EKKLESVTVSKLNFESLVKELLLIR-QYRVEIFKNKTGSKNNEWMLAFKASPGNLTQFED 119
Query: 128 VLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVA 187
+LF N+++ + ++ L N +G+G+ D+ R + +AEF D+ F+N+E+ +V
Sbjct: 120 ILFGNSDISQSVGVLGLKIGTENNERMVGVGFADVMMRKMLVAEFADNDQFSNLEALIVQ 179
Query: 188 LGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--GSVE 245
+G KEC++ T + + + LR L R +++TERKK++F ++D+VQDL+RL++ +
Sbjct: 180 MGAKECVVGTGDLHTGK---LRQVLERSNILITERKKSDFSSKDVVQDLNRLLKCKKGQQ 236
Query: 246 PVRDLVSGFE--IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
+S E IA A+ AL+ Y ELLS+E +G + I + YM+LDSAA++ALN+
Sbjct: 237 VNSATLSEMEKKIAMEAVSALIKYLELLSNEDYFGQFSIGSFDFSQYMKLDSAAVQALNL 296
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
+ +D NKN S+ GLM+R C G+RLL W+KQPL+D+N I R +V+ FV DT L
Sbjct: 297 FPTSSDGNKNQSILGLMDR-CKTVQGQRLLAQWIKQPLMDINRIEERQKLVEFFVKDTEL 355
Query: 364 RQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
RQ + + HL+R+ D +RL ++R+A LQ ++YQ+ +LP++ L+++ + LI
Sbjct: 356 RQLVAEDHLRRLPDFQRLARKFQQRKATLQDCYRVYQALDKLPHLMETLEKHGMESCQLI 415
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
E +++P + + D KF +VE ++DL Q+EN E++I +D L AL + LE
Sbjct: 416 MEIFVNPAKEILMD--FAKFQEMVEETMDLQQVENHEFLIKPGFDEELQALSEKISDLED 473
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
+I S + A DL + +K LKL+ Q G+ FR+T+KEE +R +I ++T+ +G
Sbjct: 474 KIKSQLNKVARDLGIEANKVLKLESNAQLGYFFRVTRKEEKALRN--NKNYITIDTKNNG 531
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
V+F N +K+L + Y K EEY QK +V +I A + E L ++++LDVL+SF
Sbjct: 532 VRFHNNAVKQLNEDYLKAKEEYSEQQKSIVAEIISIAAGYCETMVILNELIAQLDVLVSF 591
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
A A+S P P+ RP + P G+I L +RHPC+E Q+ ++FIPND + K F IIT
Sbjct: 592 AVSATSAPIPFVRPSLLPKGSGNIKLIDARHPCLEMQEDISFIPNDIIFEKDKQMFHIIT 651
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKST+IR GV +L+AQ+GS+VPC A +++ D I ARVGAGD Q++G+STFM E
Sbjct: 652 GPNMGGKSTYIRSAGVVVLLAQIGSYVPCSEAQVTIVDSILARVGAGDNQVKGISTFMAE 711
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETASILK AT+ SL+IIDELGRGTSTYDGFGLAWAI EH+ +I+ LFATHFHELT
Sbjct: 712 MLETASILKSATENSLMIIDELGRGTSTYDGFGLAWAISEHIATKIKGFCLFATHFHELT 771
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
LA ++ V N HV+A +++ LT+LY+V+ G CDQSFGIHVAE A+FP
Sbjct: 772 TLAD---------KIPTVNNLHVTAL--TSNDTLTLLYRVKQGPCDQSFGIHVAELAHFP 820
Query: 843 ESVVTLAREKAAELEDFTP----SAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLK 898
V+ +++KAAELEDF +++ DD E K++++ + G FL
Sbjct: 821 AHVIEFSKKKAAELEDFQSVELETSLKGDD---EPAVKKRKM----EKEEGVEIIQNFLD 873
Query: 899 EFSDMPLETMDLKEALERVKRMK 921
+P+ +M ++ L ++K MK
Sbjct: 874 SVKKLPISSMSDQDILSKMKEMK 896
>gi|182889828|gb|AAI65693.1| Msh2 protein [Danio rerio]
Length = 936
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/932 (42%), Positives = 592/932 (63%), Gaps = 45/932 (4%)
Query: 11 LKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
L +D+ GFL+FY ++ P+ T VR FDR DYYT HG++A F AK + T ++
Sbjct: 9 LSMDSASEHGFLNFYFSMSDKPDTT--VRVFDRNDYYTVHGKDAIFAAKEVFKTNGVIKN 66
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS-----NWRLVKSGTPGNL 122
LG+G+ L SV +SK FE+ RDLLL R + +E+Y+ + +W++ +PGNL
Sbjct: 67 LGSGNRRLESVVLSKMNFESFVRDLLLVR-QYRVEVYKNASKSSKEHDWQIAFKASPGNL 125
Query: 123 GSYEDVLFANN--EMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFT 179
+E++LF + + +V + +G +G+GYVD T R LG+ EF D+ F+
Sbjct: 126 TQFEEILFGSGGGPAEGAVGVVGVRLGTGTDGQRVVGVGYVDSTLRKLGVCEFPDNDQFS 185
Query: 180 NVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
N+E+ LV +G KEC+LP + K L+ + R G++LT+RKK+EF T+D+VQDL+RL
Sbjct: 186 NLEALLVQIGPKECVLPAGDSGGDQGK-LKQVVQRGGILLTDRKKSEFTTKDIVQDLNRL 244
Query: 240 VRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
++ +V +IA L A++ Y ELL+DE+N+G++ + + L+ YMRLD+
Sbjct: 245 LKARKGETVSSAALPEMEKKIAMSCLEAVIKYLELLADEANFGSFKMTTFDLNQYMRLDN 304
Query: 296 AAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
AA++ALN+ + S DA SL GL+N+ C G+RL++ W+KQPL+D N+I RLD+V
Sbjct: 305 AAVQALNLFQGSSDDATGTHSLAGLLNK-CRTPQGQRLVNQWIKQPLIDKNKIEERLDLV 363
Query: 355 QAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+ FV+D+ LR+ ++ L +R D+ R+ +++ + LQ ++YQS +LP + AL++
Sbjct: 364 ETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQSVGQLPNVVLALER 423
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
Y G+ L+ ++ PL L D +KF ++ET++D++Q+E+ E+++ S+D LS L
Sbjct: 424 YSGKHQVLLHAAFISPLNDLISD--FSKFQEMIETTLDMNQVEHHEFLVKPSFDPTLSDL 481
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ + E+ + + A +L L K +KL+ Q G+ FR+T KEE +R +F
Sbjct: 482 RENMDRSEKAMQAALSSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRN--NKKF 539
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
L+ +K+GV+FTN+KL L ++Y K EEY+ Q +V +I A + + ++L ++
Sbjct: 540 TTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVI 599
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
++LD +LSFA ++ + P P+ RP I G ++L+ +RHPCVEAQD V FIPND IR
Sbjct: 600 AQLDAVLSFAVVSHAAPVPFIRPKILEKGSGRLVLKAARHPCVEAQDEVAFIPNDVTFIR 659
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
G+ F IITGP+MGGKST+IRQVGV +LMAQ+G FVPCD A +SV DC+ ARVGAGD Q+
Sbjct: 660 GEKMFHIITGPSMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQI 719
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+GVSTFM EMLETA+IL+ AT+ SLI IDELGRGTSTYDGFGLAWAI E++ +++ L
Sbjct: 720 KGVSTFMAEMLETAAILRSATEDSLITIDELGRGTSTYDGFGLAWAISEYIATRLKSFCL 779
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHELTALA +Q+ V N HV+A +T LTMLYKV+ G CDQSFGI
Sbjct: 780 FATHFHELTALA---------QQVPTVRNLHVTAL--TTDSTLTMLYKVKKGVCDQSFGI 828
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSK-RKRISDPNDMSRGAAR 892
HVAE A+FP+ V+ AREKA ELE+F + + ++A G K +KR + + G
Sbjct: 829 HVAELASFPKHVIANAREKALELEEFQDISSVGEEA----GPKAKKRCMEKQE---GERI 881
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + MP++ M K E ++++K ++
Sbjct: 882 IEAFLAKVKSMPVDGMSDKAVKEELRKLKAEV 913
>gi|15625578|gb|AAL04169.1|AF412833_1 mismatch repair protein Msh2 [Danio rerio]
Length = 936
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/932 (42%), Positives = 591/932 (63%), Gaps = 45/932 (4%)
Query: 11 LKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
L +D+ GFL+FY ++ P+ T VR FDR DYYT HG++A F AK + T ++
Sbjct: 9 LSMDSASEHGFLNFYFSMSDKPDTT--VRVFDRNDYYTVHGKDAIFAAKEVFKTNGVIKN 66
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS-----NWRLVKSGTPGNL 122
LG+G+ L SV +SK FE+ RDLLL R + +E+Y+ + +W++ +PGNL
Sbjct: 67 LGSGNRRLESVVLSKMNFESFVRDLLLVR-QYRVEVYKNASKSSKEHDWQIAFKASPGNL 125
Query: 123 GSYEDVLFANN--EMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFT 179
+E++LF + + +V + +G +G+GYVD T R LG+ EF D+ F+
Sbjct: 126 TQFEEILFGSGGGPAEGAVGVVGVRLGTGTDGQRVVGVGYVDSTLRKLGVCEFPDNDQFS 185
Query: 180 NVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
N+E+ LV +G KEC+LP + L+ + R G++LT+RKK+EF T+D+VQDL+RL
Sbjct: 186 NLEALLVQIGPKECVLPA-GDSGGDLGKLKQVVQRGGILLTDRKKSEFTTKDIVQDLNRL 244
Query: 240 VRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
++ +V +IA L A++ Y ELL+DE+N+G++ + + L+ YMRLD+
Sbjct: 245 LKARKGETVSSAALPEMEKKIAMSCLEAVIRYLELLADEANFGSFKMTTFDLNQYMRLDN 304
Query: 296 AAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
AA++ALN+ + S DA SL GL+N+ C G+RL++ W+KQPL+D N+I RLD+V
Sbjct: 305 AAVQALNLFQGSCDDATGTHSLAGLLNK-CRTPQGQRLVNQWIKQPLIDKNKIEERLDLV 363
Query: 355 QAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+ FV+D+ LR+ ++ L +R D+ R+ +++ + LQ ++YQS +LP + AL++
Sbjct: 364 ETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQSVGQLPNVVLALER 423
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
Y G+ L+ ++ PL L D +KF ++ET++D++Q+E+ E+++ S+D LS L
Sbjct: 424 YSGKHQVLLHAAFISPLNDLISD--FSKFQEMIETTLDMNQVEHHEFLVKPSFDPTLSDL 481
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ + LE+ + + A L L K +KL+ Q G+ FR+T KEE +R +F
Sbjct: 482 RENMDRLEKAMQAALSSAARGLGLEATKTVKLESNAQIGYFFRVTCKEEKSLRN--NKKF 539
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
L+ +K+GV+FTN+KL L ++Y K EEY+ Q +V +I A + + ++L ++
Sbjct: 540 TTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVI 599
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
++LD ++SFA ++ + P P+ RP I G ++L+ +RHPCVEAQD V FIPND I
Sbjct: 600 AQLDAVVSFAVVSHTAPVPFIRPKILEKGSGRLVLKAARHPCVEAQDEVAFIPNDVTFIS 659
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
G+ F IITGPNMGGKST+IRQVGV +LMAQ+G FVPCD A +SV DC+ ARVGAGD Q+
Sbjct: 660 GEKMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQI 719
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+GVSTFM EMLETA+IL+ A++ SLIIIDELGRGTSTYDGFGLAWAI E++ +++ L
Sbjct: 720 KGVSTFMAEMLETAAILRSASEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCL 779
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHELTALA +Q+ V N HV+A +T LTMLYKV+ G CDQSFGI
Sbjct: 780 FATHFHELTALA---------QQVPTVRNLHVTAL--TTDSTLTMLYKVKKGVCDQSFGI 828
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSK-RKRISDPNDMSRGAAR 892
HVAE A+FP+ V+ AREKA ELE+F + + ++A G K +KR + + G
Sbjct: 829 HVAELASFPKHVIANAREKALELEEFQDISSVGEEA----GPKAKKRCMEKQE---GEKI 881
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + MP++ M K E ++++K ++
Sbjct: 882 IEAFLAKVKPMPVDGMSDKAVKEELRKLKAEV 913
>gi|351695603|gb|EHA98521.1| DNA mismatch repair protein Msh2 [Heterocephalus glaber]
Length = 934
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/929 (42%), Positives = 579/929 (62%), Gaps = 37/929 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ LG
Sbjct: 9 LQLESAAEIGFVRFFQAMPGKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYLG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGTKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF N++ + +V + + + +G+GYVD T+R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNSDTAASIGVVGIKMSTVDGQRQLGVGYVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP K +R + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPGGETFGDMGK-MRQIIQRAGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E + +V ++A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQMNSVVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
++ALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VKALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ+L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDVELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GRHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 VMDDLEKKMQSTLISAAHDLGLDPGKQIKLDSSGQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E +SL +L++
Sbjct: 542 VDIQKNGVKFTNSKLSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQSLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND + K
Sbjct: 602 LDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEIAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI +++ I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATRIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTDETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
AE ANFP V+ AR+KA ELE+F +E +K+ + + +G +
Sbjct: 831 AELANFPRHVIESARQKALELEEFQSIGASQPRDDMEPVAKKYCL----EREQGEKIIQE 886
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P M + E++K++K ++
Sbjct: 887 FLSKVKQVPFTEMSEENITEKLKQLKAEV 915
>gi|390357843|ref|XP_003729116.1| PREDICTED: DNA mismatch repair protein Msh2 [Strongylocentrotus
purpuratus]
Length = 929
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/902 (43%), Positives = 571/902 (63%), Gaps = 36/902 (3%)
Query: 38 FDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERT 97
F R+DYYT HG++A F A+ + T ++ LG+G++ SV +SK FE++ RDLLL R
Sbjct: 35 FIRQDYYTVHGQDAVFAAREVFKTLGVIKHLGSGANKTESVVLSKMNFESVVRDLLLVR- 93
Query: 98 DHTLELYE----GSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGC 153
+ +E+Y G +NW L +PGNL +E++LF NN+M + ++A+
Sbjct: 94 QYRVEVYSNQATGKANNWTLAYKASPGNLTQFEEILFGNNDMSSSASVMAVKVTGESGQR 153
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEA-VKSSECKTLRDAL 212
+G+GY D T R LG++EF D+ F+N+E+ +V LG +ECLLP+ + E LR +
Sbjct: 154 LVGVGYADATLRELGVSEFADNDQFSNLEALMVQLGPRECLLPSGGDPNNPEFSKLRQVV 213
Query: 213 TRCGVMLTERKKTEFKTRDLVQDLDRLVR--GSVEPVRDL-VSGFEI--APGALGALLSY 267
R GV++T+RKK +F T+D++QDL+RL++ +VE V + E A G++ AL+ Y
Sbjct: 214 QRGGVLITDRKKVDFTTKDIIQDLNRLLKVGRNVEQVNSAALPEMEKTNAMGSVSALIKY 273
Query: 268 AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAG 327
ELL DE+N+G + + + L YM+LD+AA+RALN L S D N SL L+N+ C
Sbjct: 274 MELLGDETNFGQFKLTTFDLSQYMKLDAAAVRALN-LTSTEDINGGMSLTSLLNK-CKTA 331
Query: 328 MGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEK 386
G+RLL W+KQPLLD RLD+V+ F +D LRQ L++ LKR+ D +RL ++
Sbjct: 332 QGQRLLGQWVKQPLLDKTYAEERLDMVETFFNDLELRQTLQEEPLKRVPDFQRLAKKFQR 391
Query: 387 RRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALV 446
+RA LQ K+YQ+ LP + L+++EG + L++E + +PL + D +KF +V
Sbjct: 392 KRATLQDCYKVYQAVDYLPNLIEILEKHEGDKAHLLREHFSNPLTEMLMD--FSKFQEMV 449
Query: 447 ETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
ET++DL Q+EN E++I +D L L+ + + LE + + + A DL L +K +KL+
Sbjct: 450 ETTLDLQQVENHEFLIKPDFDENLMVLRTKMDELEDDLKTQINRAARDLGLEANKTVKLE 509
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G+ FR+T+KEE +R +++ ++T K+GV+FTN+KL+ L D++ EEY
Sbjct: 510 SNNMLGYFFRVTRKEEKALRN--NSKYSTIDTNKNGVRFTNSKLRGLNDEHMAAKEEYNE 567
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI 626
QK +V+ +I A + E S+ + ++LDVL+SFA +++ P Y RP ++ G +
Sbjct: 568 TQKAVVDEIIGIASGYVEPMLSMNDITAQLDVLVSFAHVSAGAPISYVRPTLHAQGEGLL 627
Query: 627 ILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
L SRHPC+E D V FIPN+ + K F IITGPNMGGKSTFIRQVGV +LMAQ+G
Sbjct: 628 HLVQSRHPCLEMLDDVAFIPNNVTFDKDKQMFHIITGPNMGGKSTFIRQVGVIVLMAQIG 687
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
FVPCD A IS+ DCI ARVGAGDCQL+GVSTFM EMLETASIL+ AT SLIIIDELGR
Sbjct: 688 CFVPCDTAEISIVDCILARVGAGDCQLKGVSTFMAEMLETASILRSATSNSLIIIDELGR 747
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDGFGLAWAI E++ +I LFATHFHELTALA + V N HV+
Sbjct: 748 GTSTYDGFGLAWAISEYIASKICGFCLFATHFHELTALA---------DVIPTVNNLHVT 798
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVIS 866
A ++ +LT+LYKV+PG CDQSFGIHVAE A+FP+ V+ AREKAAELEDF A +
Sbjct: 799 AL--TSDGQLTLLYKVKPGVCDQSFGIHVAELAHFPQKVIDFAREKAAELEDFQSIASSA 856
Query: 867 D---DAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDD 923
+ E +K++R+ + G A F+ + +PL+ + + + +++ +K +
Sbjct: 857 AASMEGPDEPTAKKRRV----EKQEGEAIIQDFVSKVKLLPLDDLSEDDIMSKLQSLKAE 912
Query: 924 LE 925
++
Sbjct: 913 VQ 914
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 26/36 (72%)
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
D V FIPN+ + K F IITGPNMGGKSTFIRQ
Sbjct: 3 DDVAFIPNNVTFDKDKQMFHIITGPNMGGKSTFIRQ 38
>gi|196006291|ref|XP_002113012.1| hypothetical protein TRIADDRAFT_56718 [Trichoplax adhaerens]
gi|190585053|gb|EDV25122.1| hypothetical protein TRIADDRAFT_56718 [Trichoplax adhaerens]
Length = 934
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/927 (43%), Positives = 576/927 (62%), Gaps = 43/927 (4%)
Query: 10 ELKLDAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+L LD GF F +LP +R FDR D++T HG +A F+A + + + +R
Sbjct: 8 QLTLDGTNQNGFRRFLDSLPEKLETTIRIFDRSDWFTVHGSDAIFVANNIFRSKSVIRYY 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGS 124
G++ L V ++ +E + RDLLL R + +ELY+ G+ W L + TPGNL
Sbjct: 68 RNGNEKLEYVVLNNANYEKVLRDLLLVR-QYRIELYKNKGTKTNQQWYLAEKATPGNLRC 126
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+E+++F NNEM ++ ++A+ IG+ Y D T LG+++F D+ TN+E+
Sbjct: 127 FEEIIFGNNEMSESAPVIAIRLVVENGQRIIGVAYADATLYNLGISQFEDNDLMTNLEAL 186
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--- 241
+V +G KEC+L + K LR + + GV++TERKK++F +D+VQDL+RL+R
Sbjct: 187 MVQIGPKECILVSGETSVDAVK-LRQVINKTGVLVTERKKSDFNDKDIVQDLNRLLRIKS 245
Query: 242 GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRAL 301
G+ + ++ ++A + AL+ Y ELLS+ SN+ + + + L +M+LDSAA+RAL
Sbjct: 246 GNAATLAEIDQ--QVAMSCVTALIKYLELLSNVSNFNQFDLVTFDLSQFMKLDSAAVRAL 303
Query: 302 NVLESKTDA-NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
N+ S +DA NK L G++N C G+RLL WLKQPL+D+ +I RL++V FVDD
Sbjct: 304 NLFPSPSDAGNKLRCLMGVLN-YCKTAPGQRLLAQWLKQPLMDIAKIEERLNLVDVFVDD 362
Query: 361 TALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFS 419
T LRQ +++ HLKR D++RL ++ RA LQ V++YQS R+ + AL Y+ +
Sbjct: 363 TELRQSVQEDHLKRFPDLQRLAKKFQRSRANLQDCVRVYQSINRVNCLIKALVGYDSAYK 422
Query: 420 SLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQES 479
LI+ Y +PL LT D K+ L+ET+VDLD + N E++I S D L +N+ +
Sbjct: 423 DLIRNMYSNPLSDLTTD--FQKYQELIETTVDLDSVANHEFVIKPSIDPDLQEYRNQMDD 480
Query: 480 LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR 539
L QI L A DL L +K++KL+ +QFG+ FR+T KEE +R +F++++T
Sbjct: 481 LIEQISRLLSLAARDLGLEANKSIKLESNSQFGYYFRVTLKEEKALRS--NKRFMMIDTN 538
Query: 540 KDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVL 599
K GV+FTN L+ L Q++ Y Q++ VI A + E +SL+ +++ LDV+
Sbjct: 539 KHGVRFTNNNLESLNKSLQEIKSMYDGKQEDFAVEVINIASGYYEPLQSLSRIIAHLDVI 598
Query: 600 LSFADLASSCPTPYTRPDINPPDVGDIILE--GSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
+SFA +++ P PY RP I D D I+E +RHPC+E QD V FIPND K + +
Sbjct: 599 VSFAHASTNAPVPYVRPTI--LDTSDRIIELTEARHPCLEMQDDVAFIPNDVKFAKDDAE 656
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F IITGPNMGGKST+IRQ+GV +LMAQ+G FVPC A IS+ DCI ARVGAGD QL+GVS
Sbjct: 657 FIIITGPNMGGKSTYIRQIGVIVLMAQIGCFVPCSFARISIIDCILARVGAGDSQLKGVS 716
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLET+ ILK AT++SLIIIDELGRGTSTYDGFGLAWAI E + ++I A TLFATH
Sbjct: 717 TFMSEMLETSYILKTATEKSLIIIDELGRGTSTYDGFGLAWAISESIAKDIGAFTLFATH 776
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
FHELTALA++ + V N+HVSA +T LT+LY+V+PG CDQSFGIHVAE
Sbjct: 777 FHELTALAND---------IKSVKNFHVSAM--TTEEALTLLYRVKPGVCDQSFGIHVAE 825
Query: 838 FANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFL 897
A+FPE+VVT A+E+AA+LE+ + ++ E S R+R + M G H FL
Sbjct: 826 LAHFPENVVTHAKERAADLENCQAISYVT-----ESDSDRRR----DIMEEGEGLIHDFL 876
Query: 898 KEFSDMPLETMDLKEALERVKRMKDDL 924
++ S + +E + +++ L
Sbjct: 877 QKISQISTTERSPQEVYSEIAMLRNSL 903
>gi|305855210|ref|NP_001182286.1| DNA mismatch repair protein Msh2 [Sus scrofa]
gi|285818416|gb|ADC38881.1| MutS-like protein 2 [Sus scrofa]
Length = 934
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/933 (42%), Positives = 578/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEIGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVVKFMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKEHDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M +V + + + +G+GYVD +R LGL EF D+ +N+
Sbjct: 128 LSQFEDILFGNNDMSAPIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQLSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GDTAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELL+D+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLADDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DMAAVRALNLFQGSVEDTAGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + A+
Sbjct: 362 LVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAM 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++YEGQ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKYEGQHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G I L+ SRH CVE QD V FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAIPEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPAVNNLHVAAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP V+ A++KA ELE+F + ++E +KR + + +G
Sbjct: 827 GIHVAELANFPRHVIECAKQKALELEEFQNIGAPQEHDEMEPAAKRCYL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+F+ + +P M + ++K++K ++
Sbjct: 883 IIQEFVSKVKQVPFTEMSEENITMKLKQLKAEV 915
>gi|449663119|ref|XP_002154213.2| PREDICTED: DNA mismatch repair protein Msh2-like [Hydra
magnipapillata]
Length = 911
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/932 (43%), Positives = 581/932 (62%), Gaps = 67/932 (7%)
Query: 10 ELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
E+ + GF+++ L PN T VRFFDR ++YT H ++A F AK + T + ++
Sbjct: 9 EMSFENIGEHGFVAYLNNLGEKPNTT--VRFFDRGEFYTVHNDDAIFAAKELFKTQSVIK 66
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE---GSGSNWRLVKSGTPGNLG 123
+LG+G+ + SV++SKN FE R+LLL R + +ELY G + W LV +PGNL
Sbjct: 67 ELGSGNKKILSVALSKNNFEKFLRELLLIR-QYRVELYRNKTGKSNQWDLVGKASPGNLQ 125
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+E++LF NNEM D VI++L + EN IG +VDLT+R+L + EF D+ FTN+E+
Sbjct: 126 QFEEMLFGNNEMSDMAVILSLKVSSNENQKLIGAAFVDLTERILNVCEFCDNDQFTNLEA 185
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
L+ +G KEC++ + + K L+ L R V++TERKK+EF+++D+ QDL+RL++
Sbjct: 186 FLLQVGVKECVITHQDCSDNGGK-LQQVLQRSNVLITERKKSEFQSKDIHQDLNRLLKTS 244
Query: 242 -GSVEPVR--DLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
GS +R DL+ A L A++ Y ELLSDES + + I+ + L+ YMRLD+ A+
Sbjct: 245 YGSSTALREVDLLQ----AMMCLSAIIKYLELLSDESVFNQFSIKIFDLNQYMRLDAGAI 300
Query: 299 RALNVLESKTDAN-KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
+ALNV+ S D N K+ S+FGL+N C G+RLL W+KQPLLD +I RLDIV AF
Sbjct: 301 KALNVMPSVDDGNNKSMSVFGLLN-MCRTSQGQRLLAQWVKQPLLDHKKIEERLDIVDAF 359
Query: 358 VDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
+ + R+ ++ +LK++ D+ R+ +++A LQ V++YQ+ +LPY+ SAL YEG
Sbjct: 360 FNRSDTRKTIQDTYLKKMPDLTRISKKFSRKKASLQDCVRVYQAIKQLPYLLSALDSYEG 419
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
+ I + + PL+ L D +K+I L+ET+VDL+ +EN EYMI + +D+ L K
Sbjct: 420 DYKVTITDVFCKPLKDLISD--FSKYIELIETTVDLEDVENHEYMIKAEFDSSLQDCKTT 477
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR--KKLTTQFI 534
+ Q++ A L L K +KL+ +Q GH FR+T KEE +R KK TT
Sbjct: 478 MNEISEQLNDSLDDAARVLGLDAGKTIKLESNSQIGHFFRVTLKEEKVLRSCKKFTT--- 534
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
+ETRKDGV+FTN+ L +L + Y+ Y Q +L N VI+ A +++ L+ +++
Sbjct: 535 -IETRKDGVRFTNSTLSELSNAYRTQKASYNELQTQLANEVIKIASGYADPMNVLSDLVA 593
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDVLL + I D IIL GSRHPC+E QD ++FI ND KL++
Sbjct: 594 HLDVLLRY---------------IKGSD--KIILIGSRHPCMEVQDDISFIANDVKLVKE 636
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
++ F +ITGPNMGGKST+IRQ+ V LMAQ+GSFVPCD+A IS+ I ARVGAGD Q++
Sbjct: 637 EAEFLVITGPNMGGKSTYIRQIAVITLMAQIGSFVPCDQAEISIVKSIMARVGAGDSQMK 696
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
GVSTFM EMLETASIL A SLIIIDELGRGTSTYDGFGLAWAI E++ +I A LF
Sbjct: 697 GVSTFMSEMLETASILNAADKNSLIIIDELGRGTSTYDGFGLAWAISEYIATKINAFCLF 756
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATHFHELT LA E + V N+HV+A +TS +LT+LY+V+PG CDQSFGIH
Sbjct: 757 ATHFHELTTLADE---------ISTVKNFHVTAL--TTSDRLTLLYRVKPGVCDQSFGIH 805
Query: 835 VAEFANFPESVVTLAREKAAELEDF-----TPSAVISDDAKIEVGSKRKRISDPNDMSRG 889
VAE A+FP+ V+ A++KA ELEDF S +D+ IE +KR+R+ D
Sbjct: 806 VAEIADFPKHVIEFAKQKAKELEDFHVYRNGDSDAFGEDSTIEDVAKRRRM----DKKAS 861
Query: 890 AARAHQFLKEFSDMPLETMDLKEALERVKRMK 921
+ L + ++P E +E + + +K
Sbjct: 862 ETIISELLMKLKNIPTENRSDEEIIAEIDLIK 893
>gi|77736115|ref|NP_001029756.1| DNA mismatch repair protein Msh2 [Bos taurus]
gi|85701144|sp|Q3MHE4.1|MSH2_BOVIN RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|75775312|gb|AAI05269.1| MutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) [Bos
taurus]
gi|296482595|tpg|DAA24710.1| TPA: DNA mismatch repair protein Msh2 [Bos taurus]
Length = 934
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/929 (42%), Positives = 581/929 (62%), Gaps = 37/929 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+LD+ GF+ F++ +P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD T+R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC++P + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVMPG-GETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E V V ++A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ+L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQALFLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A DL L K +KLD TQFG+ FR+T KEE +R F
Sbjct: 484 IMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L +L++
Sbjct: 542 VDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA ++ + P PY RP I G I L+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAVVSFAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
AE ANFP V+ A++KA ELE+F + ++E +KR + + +G +
Sbjct: 831 AELANFPRHVIECAKQKALELEEFQNIGKPQECDEMEPAAKRCYL----EREQGEKIIQE 886
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P M + ++K++K ++
Sbjct: 887 FLSKVKQVPFTEMSEESITRKLKQLKAEV 915
>gi|75062324|sp|Q5XXB5.1|MSH2_CERAE RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|52632375|gb|AAU85549.1| mismatch repair protein [Chlorocebus aethiops]
Length = 933
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/933 (42%), Positives = 582/933 (62%), Gaps = 46/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++++P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD T+R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD TQFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F S +E +K+ + + +G
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEFQYIGE-SQGYDMEPAAKKCYL----EREQGEK 881
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + MP M + ++K++K ++
Sbjct: 882 IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 914
>gi|348574690|ref|XP_003473123.1| PREDICTED: DNA mismatch repair protein Msh2-like [Cavia porcellus]
Length = 934
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/933 (42%), Positives = 578/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ LG
Sbjct: 9 LQLESVAEAGFVRFFQAMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYLG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMAASIGVVGIKMSAVDGQRQVGVGYVDSAQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ EF T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRAGILITERKRAEFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + +LLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLDLLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA++ALN+ + S D + SL L+N+ C G+RL+H W+KQPL+D N I RL+
Sbjct: 303 DIAAVKALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVHQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++YEG+ +L+ + PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKYEGRHQALLLAVFAAPLVDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREVMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E +SL
Sbjct: 538 NFSTVDIQKNGVKFTNSKLSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQSLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD V FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI +++ I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATRIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T+ LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTAETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP VV A++KA ELE+F E +K+ + + +G
Sbjct: 827 GIHVAELANFPRHVVECAKQKALELEEFQSIGASQGCNDREPAAKKCYL----EREQGER 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P M + +++K++K ++
Sbjct: 883 IIQEFLTKVKQVPFTEMSEESITKKLKQLKAEV 915
>gi|301753265|ref|XP_002912468.1| PREDICTED: DNA mismatch repair protein Msh2-like [Ailuropoda
melanoleuca]
gi|281352642|gb|EFB28226.1| hypothetical protein PANDA_000218 [Ailuropoda melanoleuca]
Length = 934
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/929 (43%), Positives = 581/929 (62%), Gaps = 37/929 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKTQGVVKYIG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEG-SGS------NWRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ +GS +W L +PGN
Sbjct: 69 PAGTKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGSKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GEAAGDMGKLRQVIQRGGILITERKRADFFTKDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G EPV V ++A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEPVNSAVLPEMENQVAASSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ SL+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQSLLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 IMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L +L++
Sbjct: 542 VDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA ++++ P PY RP I G I L+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAVVSFAHVSNAAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
AE ANFP V+ AR+KA ELE+F +E +KR + + +G +
Sbjct: 831 AELANFPRHVIECARQKALELEEFQNIGESQGYDDMEPAAKRCYL----EREQGEKIIQE 886
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P M + ++K++K ++
Sbjct: 887 FLSKVKQVPFTEMSEENITMKLKQLKAEV 915
>gi|410954733|ref|XP_003984016.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
[Felis catus]
Length = 934
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/933 (42%), Positives = 579/933 (62%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++T+P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLESAAEIGFVRFFQTMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKTQGVVKYIG 68
Query: 70 T-GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PPGTKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQVIQRGGILITERKRGDFFTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YMRL
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAASSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMRL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++YEG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKYEGKHQRLLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTXNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G I L+ SRH CVE QD V FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP V+ A++KA ELE+F D ++E +KR + + +G
Sbjct: 827 GIHVAELANFPRHVIECAKQKALELEEFQNIGKSQDYGEMEPAAKRCYL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P M + +++K++K ++
Sbjct: 883 IIQEFLSKVKQVPFTEMSEENITKKLKQLKAEV 915
>gi|380812930|gb|AFE78339.1| DNA mismatch repair protein Msh2 [Macaca mulatta]
gi|383418515|gb|AFH32471.1| DNA mismatch repair protein Msh2 [Macaca mulatta]
Length = 933
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/933 (42%), Positives = 581/933 (62%), Gaps = 46/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++++P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDPELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQRLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD TQFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F S +E +K+ + + +G
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEFQYIGE-SQGYDMEPAAKKCYL----EREQGEK 881
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P M + ++K++K ++
Sbjct: 882 IIQEFLSKVKQIPFTEMSEENITIKLKQLKAEV 914
>gi|355704522|gb|AES02255.1| mutS-like protein 2, colon cancer, nonpolyposis type 1 [Mustela
putorius furo]
Length = 934
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/929 (43%), Positives = 574/929 (61%), Gaps = 37/929 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLESASEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKTQGVIKYIG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ RDLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGTKTLESVVLSKMNFESFVRDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGIKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDIGKLRQVIQRGGILITERKRADFLTKDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E V V ++A +L A++ + +LLSDESN+G + + + YM+LD AA
Sbjct: 247 GKKGEQVNSAVLPEMENQVAASSLSAVIKFLDLLSDESNFGQFELTMFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPLLD N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLLDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ SL+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQSLLLAIFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 IMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSNAQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L +L++
Sbjct: 542 VDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA +++ P PY RP I G I L+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A IS+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCESAEISIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ + V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------HIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
AE ANFP V+ AR+KA ELE+F E +KR + + +G +
Sbjct: 831 AELANFPRHVIECARQKALELEEFQNIGGSQGYDDTEPAAKRCYL----EREQGEKIIQE 886
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P M + ++K++K ++
Sbjct: 887 FLSKVKQVPFTEMSEENITMKLKQLKAEV 915
>gi|73969550|ref|XP_538482.2| PREDICTED: DNA mismatch repair protein Msh2 isoform 1 [Canis lupus
familiaris]
Length = 934
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/929 (43%), Positives = 579/929 (62%), Gaps = 37/929 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAH E+A A+ + T ++ LG
Sbjct: 9 LQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKTQGVIKYLG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEG-SGS------NWRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ +GS +W L +PGN
Sbjct: 69 PAGTKTLESVVLSKMNFESFVKDLLLIR-QYRVEVYKNRAGSKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSTSIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E V V ++A AL A++ + ELLSD+SN+G Y + + YM+LD AA
Sbjct: 247 GKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQYELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQGLLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 IMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L +L++
Sbjct: 542 VDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA +++ P PY RP I G I L+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
AE ANFP V+ A++KA ELE+F ++E +KR + + +G +
Sbjct: 831 AELANFPRHVIECAKQKALELEEFQNIGGSQGYDEMEPAAKRCYL----EREQGEKIIQE 886
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P M + ++K++K ++
Sbjct: 887 FLSKVKQVPFTEMSEENITMKLKQLKAEV 915
>gi|426335483|ref|XP_004029250.1| PREDICTED: DNA mismatch repair protein Msh2 [Gorilla gorilla
gorilla]
Length = 934
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/933 (42%), Positives = 579/933 (62%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F +E +K+ + + +G
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + MP M + ++K++K ++
Sbjct: 883 IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 915
>gi|30047836|gb|AAH50897.1| MutS homolog 2 (E. coli) [Mus musculus]
Length = 935
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/931 (42%), Positives = 583/931 (62%), Gaps = 41/931 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L+ GF+ F++ +P + VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
GS L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENEWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + ++ + + +G+GYVD T+R LGL EF ++ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 GSVEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G + + E +A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D+ LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GRHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A L L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 VMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E ++L +L+
Sbjct: 542 VDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAH 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA ++++ P PY RP I G IIL+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI +++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDF--TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
AE ANFP V+ A++KA ELE+F +++ D+A E +KR+ + + +G
Sbjct: 831 AELANFPRHVIACAKQKALELEEFQNIGTSLGCDEA--EPAAKRRCL----EREQGEKII 884
Query: 894 HQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL +F +P M + ++K++K ++
Sbjct: 885 LEFLSKFKQVPFTAMSEESISAKLKQLKAEV 915
>gi|4557761|ref|NP_000242.1| DNA mismatch repair protein Msh2 isoform 1 [Homo sapiens]
gi|1171032|sp|P43246.1|MSH2_HUMAN RecName: Full=DNA mismatch repair protein Msh2; Short=hMSH2;
AltName: Full=MutS protein homolog 2
gi|149242559|pdb|2O8B|A Chain A, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G T MISPAIR
gi|149242563|pdb|2O8C|A Chain A, Human Mutsalpha (msh2/msh6) Bound To Adp And An
O6-methyl-guanine T Mispair
gi|149242567|pdb|2O8D|A Chain A, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G DU MISPAIR
gi|149242575|pdb|2O8F|A Chain A, Human Mutsalpha (Msh2MSH6) BOUND TO DNA WITH A SINGLE BASE
T INSERT
gi|364506055|pdb|3THW|A Chain A, Human Mutsbeta Complexed With An Idl Of 4 Bases (Loop4)
And Adp
gi|364506058|pdb|3THX|A Chain A, Human Mutsbeta Complexed With An Idl Of 3 Bases (Loop3)
And Adp
gi|364506062|pdb|3THY|A Chain A, Human Mutsbeta Complexed With An Idl Of 2 Bases (Loop2)
And Adp
gi|364506066|pdb|3THZ|A Chain A, Human Mutsbeta Complexed With An Idl Of 6 Bases (Loop6)
And Adp
gi|432998|gb|AAA61870.1| homolog of bacterial MutS proteins [Swiss-Prot accession numbers
P23909, P10339, and P27345]; germline mutations are
responsible for hereditary nonpolyposis colon cancer
(HNPCC) [Homo sapiens]
gi|433147|gb|AAA18643.1| homolog of S. cerevisiae Msh2p [Swiss-Prot accession number P25847]
and bacterial MutS proteins [Swiss-Prot accession
numbers P23909, P10339, and P27345] [Homo sapiens]
gi|1000867|gb|AAB59564.1| DNA mismatch repair protein [Homo sapiens]
gi|1000869|gb|AAB59565.1| DNA mismatch repair protein [Homo sapiens]
gi|1000881|gb|AAA76858.1| DNA mismatch repair protein [Homo sapiens]
gi|18204306|gb|AAH21566.1| MutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) [Homo
sapiens]
gi|46488018|gb|AAS99351.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) [Homo
sapiens]
gi|119620619|gb|EAX00214.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli),
isoform CRA_b [Homo sapiens]
gi|123983816|gb|ABM83484.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)
[synthetic construct]
gi|123998193|gb|ABM86698.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)
[synthetic construct]
gi|224487757|dbj|BAH24113.1| mutS homolog 2, colon cancer, nonpolyposis type 1 [synthetic
construct]
Length = 934
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/933 (42%), Positives = 578/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F +E +K+ + + +G
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + MP M + ++K++K ++
Sbjct: 883 IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 915
>gi|332226455|ref|XP_003262405.1| PREDICTED: DNA mismatch repair protein Msh2 isoform 1 [Nomascus
leucogenys]
Length = 934
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/933 (42%), Positives = 578/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLSAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G I+L+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIMLKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F +E +K+ + + +G
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + MP M + ++K++K ++
Sbjct: 883 IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 915
>gi|397504274|ref|XP_003822726.1| PREDICTED: DNA mismatch repair protein Msh2 [Pan paniscus]
gi|410258444|gb|JAA17189.1| mutS homolog 2, colon cancer, nonpolyposis type 1 [Pan troglodytes]
gi|410298744|gb|JAA27972.1| mutS homolog 2, colon cancer, nonpolyposis type 1 [Pan troglodytes]
Length = 934
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/933 (42%), Positives = 577/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGCQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F +E +K+ + + +G
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + MP M + ++K++K ++
Sbjct: 883 IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 915
>gi|410222628|gb|JAA08533.1| mutS homolog 2, colon cancer, nonpolyposis type 1 [Pan troglodytes]
Length = 934
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/933 (42%), Positives = 577/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGCQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F +E +K+ + + +G
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + MP M + ++K++K ++
Sbjct: 883 IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 915
>gi|149242571|pdb|2O8E|A Chain A, Human Mutsalpha (Msh2MSH6) BOUND TO A G T MISPAIR, WITH
ADP BOUND TO Msh2 Only
Length = 934
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/933 (42%), Positives = 577/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDAYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP+ V+ A++KA ELE+F +E +K+ + + +G
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + MP M + ++K++K ++
Sbjct: 883 IIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 915
>gi|6678938|ref|NP_032654.1| DNA mismatch repair protein Msh2 [Mus musculus]
gi|1171033|sp|P43247.1|MSH2_MOUSE RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|534945|emb|CAA57049.1| MSH2 [Mus musculus]
gi|28436763|gb|AAH47117.1| MutS homolog 2 (E. coli) [Mus musculus]
gi|74186106|dbj|BAE34223.1| unnamed protein product [Mus musculus]
gi|148706688|gb|EDL38635.1| mutS homolog 2 (E. coli) [Mus musculus]
Length = 935
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/931 (42%), Positives = 582/931 (62%), Gaps = 41/931 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L+ GF+ F++ +P + VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
GS L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENEWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + ++ + + +G+GYVD T+R LGL EF ++ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 GSVEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G + + E +A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D+ LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GRHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A L L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 VMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E ++L +L+
Sbjct: 542 VDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAH 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA ++++ P PY RP I G IIL+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI +++ +I A +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDF--TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
AE ANFP V+ A++KA ELE+F +++ D+A E +KR+ + + +G
Sbjct: 831 AELANFPRHVIACAKQKALELEEFQNIGTSLGCDEA--EPAAKRRCL----EREQGEKII 884
Query: 894 HQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P M + ++K++K ++
Sbjct: 885 LEFLSKVKQVPFTAMSEESISAKLKQLKAEV 915
>gi|726086|gb|AAA75027.1| MutS homolog 2 [Mus musculus]
Length = 935
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/931 (42%), Positives = 582/931 (62%), Gaps = 41/931 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L+ GF+ F++ +P + VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
GS L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGSKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENEWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + ++ + + +G+GYVD T+R LGL EF ++ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASVGVMGIKMAVVDGQRHVGVGYVDSTQRKLGLCEFPENDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 GSVEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G + + E +A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQINSAALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKLDMAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDRNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D+ LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GRHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A L L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 VMDGLEKKMQSTLINAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E ++L +L+
Sbjct: 542 VDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAH 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA ++++ P PY RP I G IIL+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAIVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLET+SIL+ AT SLIIIDELGRGTSTYDGFGLAWAI +++ +I A +FA
Sbjct: 722 VSTFMAEMLETSSILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDF--TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
AE ANFP V+ A++KA ELE+F +++ D+A E +KR+ + + +G
Sbjct: 831 AELANFPRHVIACAKQKALELEEFQNIGTSLGCDEA--EPAAKRRCL----EREQGEKII 884
Query: 894 HQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P M + ++K++K ++
Sbjct: 885 LEFLSKVKQVPFTAMSEESISAKLKQLKAEV 915
>gi|426223711|ref|XP_004006017.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
[Ovis aries]
Length = 935
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/934 (42%), Positives = 581/934 (62%), Gaps = 46/934 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHQEDALLAAREVFKTQGVVKXVG 68
Query: 70 TGSDA--LSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPG 120
+A L SV +SK FE+ +DLLL R + +E+Y+ N W L +PG
Sbjct: 69 PTGEAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPG 127
Query: 121 NLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
NL +ED+LF NN+M + +V + + + +G+GYVD T+R LGL EF D+ F+N
Sbjct: 128 NLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDATQRKLGLCEFPDNDQFSN 187
Query: 181 VESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
+E+ L+ +G KEC++P + + LR + R G+++TERK+ +F +D+ QDL+RL+
Sbjct: 188 LEALLIQIGPKECVIPG-GETAGDMGKLRQVIQRGGILITERKRADFSMKDIYQDLNRLL 246
Query: 241 RG--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
+G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+
Sbjct: 247 KGKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMK 302
Query: 293 LDSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARL 351
LD AA+RALN+ + S D + + SL L+N+ C G+RL++ W+KQPL+D N I RL
Sbjct: 303 LDIAAVRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLINQWIKQPLMDKNRIEERL 361
Query: 352 DIVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
++V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + A
Sbjct: 362 NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA 421
Query: 411 LQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
L++YEG+ +L+ ++ PL L D +KF ++ET++D++Q+EN E+++ S+D L
Sbjct: 422 LEKYEGKHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMEQVENHEFLVKPSFDPNL 479
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
S L+ + LE+++ S A DL L K +KLD TQFG+ FR+T KEE +R
Sbjct: 480 SELREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--N 537
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++
Sbjct: 538 KNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTFN 597
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L++LD ++SFA ++++ P PY RP I G I L+ SRH CVE QD V FIPND
Sbjct: 598 DVLAQLDAVVSFAHVSNAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVH 657
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 FEKDKQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGD 717
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 SQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGA 777
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQS 830
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQS
Sbjct: 778 FCMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQS 826
Query: 831 FGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGA 890
FGIHVAE ANFP V+ A++KA ELE+F + ++E +KR + + +G
Sbjct: 827 FGIHVAELANFPRHVIECAKQKALELEEFQNIGKPQECDEMEPAAKRCYL----EREQGE 882
Query: 891 ARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P M + ++K++K ++
Sbjct: 883 KIIQEFLSKVKQVPFTEMSEESITRKLKQLKAEV 916
>gi|149050462|gb|EDM02635.1| mutS homolog 2 (E. coli) [Rattus norvegicus]
gi|171846747|gb|AAI61846.1| Msh2 protein [Rattus norvegicus]
Length = 933
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/933 (41%), Positives = 578/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L+ GF+ F++ +P + VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLEGAAEVGFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L +V +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLQTVVLSKMNFESFVKDLLLVR-HYRVEVYKNKAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + I+ + + + +G+GYVD T+R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSTSIGIMGIKLSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECILPG-GETAGDMGKLRQVIQRGGILITERKRIDFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GRKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL+ W+KQPL+D N I RL+
Sbjct: 303 DMAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVSQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D+ LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++Y+G+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKYQGRHQALLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + LE+++ S A L L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LD ++SFA ++++ P PY RP I G IIL+ SRH CVE QD V FIPND
Sbjct: 598 VLAHLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDDVAFIPNDVHF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALA---------SQIPTVNNLHVTAL--TTEETLTMLYQVKTGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP V+ A++KA ELE+F + + +KR+ + + +G
Sbjct: 827 GIHVAELANFPRHVIECAKQKALELEEFQSIGTSQGHDETQPAAKRRCL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P + + ++K++K ++
Sbjct: 883 IILEFLSKVKQVPFTDLSEESVSVKLKQLKAEV 915
>gi|62898129|dbj|BAD97004.1| mutS homolog 2 variant [Homo sapiens]
Length = 878
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/868 (44%), Positives = 553/868 (63%), Gaps = 41/868 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILGKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
GIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEF 854
>gi|62897279|dbj|BAD96580.1| mutS homolog 2 variant [Homo sapiens]
Length = 878
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/868 (44%), Positives = 553/868 (63%), Gaps = 41/868 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEVIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
GIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEF 854
>gi|119620618|gb|EAX00213.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli),
isoform CRA_a [Homo sapiens]
Length = 924
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/868 (44%), Positives = 553/868 (63%), Gaps = 41/868 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
GIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEF 854
>gi|1079805|gb|AAA82080.1| similar to S. cerevisiae Msh2p (Swiss-Prot accession number P25847)
and bacterial MutS proteins (Swiss-Prot accession
numbers P23909, P10339, and P27345) [Homo sapiens]
Length = 887
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/868 (44%), Positives = 553/868 (63%), Gaps = 41/868 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
GIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEF 854
>gi|55733310|emb|CAH93337.1| hypothetical protein [Pongo abelii]
Length = 886
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/868 (44%), Positives = 553/868 (63%), Gaps = 41/868 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
GIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 827 GIHVAELANFPKHVIECAKQKALELEEF 854
>gi|260835244|ref|XP_002612619.1| hypothetical protein BRAFLDRAFT_280395 [Branchiostoma floridae]
gi|229297997|gb|EEN68628.1| hypothetical protein BRAFLDRAFT_280395 [Branchiostoma floridae]
Length = 905
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/906 (43%), Positives = 573/906 (63%), Gaps = 43/906 (4%)
Query: 36 RFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLLE 95
R FDR +YYTAHG +A F AK + T ++ +GTG + + V++SK FE++ R+LLL
Sbjct: 10 RAFDRTEYYTAHGPDAIFAAKEIFKTMGVVKTMGTGPNKMEYVNLSKMNFESLVRELLLV 69
Query: 96 RTDHTLELYEGSGS----NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFREN 151
R + LE+Y+ G+ +W L +PGNL ED +F ++ + ++A+ + N
Sbjct: 70 R-QYRLEVYKNKGTAKNNDWELDIKASPGNLTQVEDFIFGSSGAVTSSGVLAVKLSGEGN 128
Query: 152 GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDA 211
+G GY D T R LG+ EF+D+ F+N+E+ ++ G KECL+P+ + + LR
Sbjct: 129 NKVVGAGYADATMRKLGVCEFVDNDQFSNLEALVIQTGPKECLIPS-GENTPDMGRLRMV 187
Query: 212 LTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSV--EPVRDL-VSGFE--IAPGALGALLS 266
L R G+++TER+K E+ T+D VQDL+RL++ E V +S E A ++ AL+
Sbjct: 188 LERNGLLITERRKAEYSTKDNVQDLNRLLKPKTKGEQVNSAALSEIEKTAAMASVSALIK 247
Query: 267 YAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF-SLFGLMNRTCT 325
Y ELL DE+N+G + + + L+ YMRLD+AA+RALN+L + D F S+ GL+ C
Sbjct: 248 YLELLGDETNFGQFKLVTFDLNQYMRLDAAAVRALNLLPTSLDGGNRFQSVAGLLTH-CR 306
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNL 384
G RLL W+KQPL+D N I RL++V+A V+D LRQ L++ L+++ D RL
Sbjct: 307 TSQGHRLLTQWVKQPLMDKNRIEERLNVVEALVEDAELRQTLQEEQLRKVPDFHRLAKKF 366
Query: 385 EKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIA 444
+++RA LQ ++YQ+ +P++ AL+++ G SL+ E + +P++ L D KF
Sbjct: 367 QRKRANLQDCYRVYQALNIIPHLTEALEKHAGSHRSLLMELFSNPIKELLYD--FRKFQE 424
Query: 445 LVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALK 504
+VET++D+D+++ E++I +D L L+ + L+ I S + A +L L +K LK
Sbjct: 425 MVETTMDMDRVDKHEFVIKPDFDDNLKELREKMNKLDEDIKSHLNEAARELKLEPNKVLK 484
Query: 505 LDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEY 564
L+ TQ G+ FR+T KEE +R ++ LET K+GVKFT++ L+++ ++Y K E Y
Sbjct: 485 LETSTQLGYHFRVTLKEEKALRG--NKKYRTLETSKNGVKFTDSDLQRMNEEYLKSKEAY 542
Query: 565 KNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG 624
+ QK +V+ ++ A + E SL+ ++++LD L+SFA +++ P PY RP + G
Sbjct: 543 ADTQKAVVDEILGIAAGYVEPMGSLSDVIAQLDALVSFACASANAPIPYVRPKLTEKGEG 602
Query: 625 DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
I L +RHPC+E QD V FIPND R + F I+TGPNMGGKST+IRQ+GVN+LMAQ
Sbjct: 603 GIKLVNARHPCLELQDDVQFIPNDASFDRDEQMFLIVTGPNMGGKSTYIRQIGVNVLMAQ 662
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G FVPCD A + + DCI ARVGAGD QL+GVSTFM EMLETASIL+ AT SLIIIDEL
Sbjct: 663 IGCFVPCDSAEVCIVDCILARVGAGDSQLKGVSTFMSEMLETASILRSATKDSLIIIDEL 722
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA-NY 803
GRGTSTYDGFGLAWAI EH+ +I A LFATHFHELTALA +V A N
Sbjct: 723 GRGTSTYDGFGLAWAISEHIATKIGAFCLFATHFHELTALA----------DVVPTATNL 772
Query: 804 HVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---- 859
HV+A +T LT+LYKV+PG CDQSFGIHVAE A+FPE V+ AR+KA ELED+
Sbjct: 773 HVTAL--TTGGTLTLLYKVKPGVCDQSFGIHVAELAHFPEKVIEFARQKALELEDYQSIS 830
Query: 860 -TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVK 918
+ +A+ DA V +K++RI+ G A FL + D+PL TM EA V+
Sbjct: 831 LSGTAMEGTDA---VAAKKRRIAK----QEGEAIIQDFLSKVKDLPLATMTADEAQAAVQ 883
Query: 919 RMKDDL 924
++K+++
Sbjct: 884 QLKEEV 889
>gi|354474732|ref|XP_003499584.1| PREDICTED: DNA mismatch repair protein Msh2 [Cricetulus griseus]
Length = 934
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/934 (41%), Positives = 577/934 (61%), Gaps = 46/934 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ F+ F++ +P + VR FDR D+YTAHGE+A A+ T+ ++ L
Sbjct: 9 LQLESAAEAAFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAARXXXXTSNSIHFLF 68
Query: 70 T-GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 ILGAKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF +N+M + V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGSNDMSASIGTVGVKMSTVDGQRHVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQVIQRGGILITERKRADFSTKDICQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YMRL
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFRQYMRL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DMAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+ FV+D+ LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVETFVEDSELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPSVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++Y+G+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 KKYQGRHQALLMAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + LE+++ S A L L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA ++++ P PY RP I G I+L+ SRH CVE QD V FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIVLKASRHACVEIQDEVAFIPNDVCF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETA+IL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETAAILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA Q+ V N HV+A ++ LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALA---------SQIPTVNNLHVTAL--TSEETLTMLYQVKKGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD-DAKIEVGSKRKRISDPNDMSRGA 890
GIHVAE ANFP VV AR+KA ELE+F D ++E +K+ + + +G
Sbjct: 827 GIHVAELANFPRHVVECARQKALELEEFQSIGTSQGRDGEMEPPAKKCYL----EREQGE 882
Query: 891 ARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P M + ++K++K ++
Sbjct: 883 KIIMEFLSKVKQVPFTDMSEENITRKLKQLKAEV 916
>gi|355565679|gb|EHH22108.1| hypothetical protein EGK_05309 [Macaca mulatta]
Length = 962
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/962 (41%), Positives = 581/962 (60%), Gaps = 75/962 (7%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++++P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLD-----------------------------LPVDKA 502
L+ LE+++ S A DL L K
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGRHETSVNMCKMYIGSNRKGRTTRSKGLSGLDPGKQ 539
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
+KLD TQFG+ FR+T KEE +R F ++ +K+GVKFTN+KL L ++Y K
Sbjct: 540 IKLDSSTQFGYYFRVTCKEEKVLRN--NKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKT 597
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
EY+ Q +V ++ + + E ++L +L++LD ++SFA +++ P PY RP I
Sbjct: 598 EYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKG 657
Query: 623 VGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
G IIL+ SRH CVE QD + FIPND + K F IITGPNMGGKST+IRQ GV +LM
Sbjct: 658 QGRIILKASRHACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLM 717
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQ+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETASIL+ AT SLIIID
Sbjct: 718 AQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIID 777
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
ELGRGTSTYDGFGLAWAI E++ +I A +FATHFHELTALA+ Q+ V N
Sbjct: 778 ELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN---------QIPTVNN 828
Query: 803 YHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
HV+A +T LTMLY+V+ G CDQSFGIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 829 LHVTAL--TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYI 886
Query: 863 AVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKD 922
S +E +K+ + + +G +FL + MP M + ++K++K
Sbjct: 887 GE-SQGYDMEPAAKKCYL----EREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKA 941
Query: 923 DL 924
++
Sbjct: 942 EV 943
>gi|34330121|dbj|BAC82442.1| hypothetical protein [Gallus gallus]
Length = 861
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/875 (44%), Positives = 559/875 (63%), Gaps = 49/875 (5%)
Query: 75 LSSVSVSKNMFETIARDLLLERTDHTLELYE---GSGS----NWRLVKSGTPGNLGSYED 127
L SV +SK FE+ RDLLL R + +E+Y+ GS S +W L G+PGNL +E+
Sbjct: 3 LESVVLSKMNFESFVRDLLLVR-HYRVEVYKNKAGSKSVKENDWYLAYKGSPGNLAQFEE 61
Query: 128 VLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVA 187
VLFANN+M +V + + + IG+GYVD T R L + EF D+ F+N+E+ LV
Sbjct: 62 VLFANNDMSMAIGVVGVKLSSADGQRVIGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQ 121
Query: 188 LGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPV 247
LG KEC+LP + E LR + R G+++T+RKK +F T+D+VQDL+RL++
Sbjct: 122 LGPKECVLPG-GDTAGEMGKLRQVVQRGGILITDRKKADFTTKDIVQDLNRLLKSRKGEQ 180
Query: 248 RDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
+ + E +A +L A++ + ELLSD+SN+G Y + + L YM LD+AA++ALN+
Sbjct: 181 MNSAALPEMEKQVAVSSLSAVIKFLELLSDDSNFGQYELTTFDLSQYMVLDNAAVQALNL 240
Query: 304 LESKTD-ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
+S + AN SL GL+N+ C G+RL++ W+KQPL+D N I RL++V+AFV DT
Sbjct: 241 FQSSVENANNTQSLAGLLNK-CRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVVDTE 299
Query: 363 LRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSL 421
LRQ L++ L +R D+ RL +++ A LQ ++YQ+ +LP + AL+++EG L
Sbjct: 300 LRQGLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNVVQALEKHEGAHQML 359
Query: 422 IKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLE 481
+ ++ PL + D +KF+ ++ET+VD+D++EN E+++ +S+D L+ L+ + LE
Sbjct: 360 LLAGFITPLNDIHSD--FSKFLEMIETTVDMDKVENHEFLVKASFDPNLTELREKMNELE 417
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
+ +L K A +L L K++KL+ +QFGH FRIT KEE +R T+F + +T+K+
Sbjct: 418 ESMQTLLKSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEKVLRN--NTKFKITDTQKN 475
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
GVKFTN+KL + ++Y K EEY+ Q +V +I A ++E +++ ++++LD ++S
Sbjct: 476 GVKFTNSKLSAINEEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVS 535
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQII 661
FA +++ P PY RP + G I+L+G+RHPC+E QD V FIPND +GK F II
Sbjct: 536 FAHVSNGAPVPYVRPVVLEKGQGRIVLKGARHPCIEVQDEVAFIPNDVTFEKGKQMFHII 595
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKST+IRQ GV +LMAQ+G FVPCD A I++ DCI ARVGAGD QL+GVSTFM
Sbjct: 596 TGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVSTFMA 655
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EMLETASIL+ A++ SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATHFHEL
Sbjct: 656 EMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATHFHEL 715
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
TALA Q+ V N HV+A ++ LTMLY+V+ G CDQSFGIHVAE A F
Sbjct: 716 TALAD---------QVPTVNNLHVTAL--TSDDTLTMLYRVKAGVCDQSFGIHVAELAAF 764
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP------NDMSRGAARAHQ 895
P+ V+ AREKA ELE+F ++G ++ +P + G
Sbjct: 765 PKHVIESAREKALELEEFQ-----------DIGRPKESEGEPAAKRCYREREEGEKIIQD 813
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDD-LEKDAG 929
FL + +PL M ++ ++K+++ D L K+ G
Sbjct: 814 FLSQVKALPLTDMSEEDIKTKLKQLRADVLAKNNG 848
>gi|355751300|gb|EHH55555.1| hypothetical protein EGM_04786 [Macaca fascicularis]
Length = 962
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/962 (41%), Positives = 581/962 (60%), Gaps = 75/962 (7%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++++P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+S++G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSSFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLD-----------------------------LPVDKA 502
L+ LE+++ S A DL L K
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGRHETSVNMCKMYIGSNRKGRTTRSKGLSGLDPGKQ 539
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
+KLD TQFG+ FR+T KEE +R F ++ +K+GVKFTN+KL L ++Y K
Sbjct: 540 IKLDSSTQFGYYFRVTCKEEKVLRN--NKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKT 597
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
EY+ Q +V ++ + + E ++L +L++LD ++SFA +++ P PY RP I
Sbjct: 598 EYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKG 657
Query: 623 VGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
G IIL+ SRH CVE QD + FIPND + K F IITGPNMGGKST+IRQ GV +LM
Sbjct: 658 QGRIILKASRHACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLM 717
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQ+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETASIL+ AT SLIIID
Sbjct: 718 AQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIID 777
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
ELGRGTSTYDGFGLAWAI E++ +I A +FATHFHELTALA+ Q+ V N
Sbjct: 778 ELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN---------QIPTVNN 828
Query: 803 YHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
HV+A +T LTMLY+V+ G CDQSFGIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 829 LHVTAL--TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYI 886
Query: 863 AVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKD 922
S +E +K+ + + +G +FL + MP M + ++K++K
Sbjct: 887 GE-SQGYDMEPAAKKCYL----EREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKA 941
Query: 923 DL 924
++
Sbjct: 942 EV 943
>gi|363731309|ref|XP_426110.3| PREDICTED: DNA mismatch repair protein Msh2 [Gallus gallus]
Length = 907
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/887 (43%), Positives = 565/887 (63%), Gaps = 49/887 (5%)
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE---GSGS----NWRLVK 115
T +R + G+ L SV +SK FE+ RDLLL R + +E+Y+ GS S +W L
Sbjct: 37 TGIRFVLLGNQKLESVVLSKMNFESFVRDLLLVR-HYRVEVYKNKAGSKSVKENDWYLAY 95
Query: 116 SGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDD 175
G+PGNL +E+VLFANN+M +V + + + IG+GYVD T R L + EF D+
Sbjct: 96 KGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSSADGQRVIGVGYVDTTLRKLSVCEFPDN 155
Query: 176 SHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
F+N+E+ LV LG KEC+LP + E LR + R G+++T+RKK +F T+D+VQD
Sbjct: 156 DQFSNLEALLVQLGPKECVLPG-GDTAGEMGKLRQVVQRGGILITDRKKADFTTKDIVQD 214
Query: 236 LDRLVRGSVEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
L+RL++ + + E +A +L A++ + ELLSD+SN+G Y + + L YM
Sbjct: 215 LNRLLKSRKGEQMNSAALPEMEKQVAVSSLSAVIKFLELLSDDSNFGQYELTTFDLSQYM 274
Query: 292 RLDSAAMRALNVLESKTD-ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
LD+AA++ALN+ +S + AN SL GL+N+ C G+RL++ W+KQPL+D N I R
Sbjct: 275 VLDNAAVQALNLFQSSVENANNTQSLAGLLNK-CRTPQGQRLVNQWIKQPLMDKNRIEER 333
Query: 351 LDIVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS 409
L++V+AFV DT LRQ L++ L +R D+ RL +++ A LQ ++YQ+ +LP +
Sbjct: 334 LNLVEAFVVDTELRQGLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNVVQ 393
Query: 410 ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
AL+++EG L+ ++ PL + D +KF+ ++ET++D+D++EN E+++ +S+D
Sbjct: 394 ALEKHEGAHQMLLLAVFITPLNDIHSD--FSKFLEMIETTLDMDKVENHEFLVKASFDPN 451
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L+ L+ + LE + +L K A +L L K++KL+ +QFGH FRIT KEE +R +
Sbjct: 452 LTELREKMNELEESMQTLLKSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEKVLRNNM 511
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
++ + +T+K+GVKFTN+KL + ++Y K EEY+ Q +V +I A ++E +++
Sbjct: 512 --KYKITDTQKNGVKFTNSKLSAINEEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTM 569
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
++++LD ++SFA +++ P PY RP I G I+L+G+RHPC+E QD V FIPND
Sbjct: 570 NDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDV 629
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
+GK F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A I++ DCI ARVGAG
Sbjct: 630 TFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCNSAEITIVDCILARVGAG 689
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETASIL+ A++ SLIIIDELGRGTSTYDGFGLAWAI E++ +I
Sbjct: 690 DSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKIC 749
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQ 829
A +FATHFHELTALA Q+ V N HV+A ++ LTMLY+V+ G CDQ
Sbjct: 750 AFCMFATHFHELTALAD---------QVPTVNNLHVTAL--TSDDTLTMLYRVKAGVCDQ 798
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP------ 883
SFGIHVAE A FP+ V+ AREKA ELE+F ++G ++ +P
Sbjct: 799 SFGIHVAELAAFPKHVIESAREKALELEEFQ-----------DIGRPKESEGEPAAKRCY 847
Query: 884 NDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDD-LEKDAG 929
+ G FL + +PL M ++ ++K+++ D L K+ G
Sbjct: 848 REREEGEKIIQDFLSQVKALPLTDMSEEDIKTKLKQLRADVLAKNNG 894
>gi|449275266|gb|EMC84169.1| DNA mismatch repair protein Msh2, partial [Columba livia]
Length = 863
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/873 (43%), Positives = 557/873 (63%), Gaps = 48/873 (5%)
Query: 71 GSDALSSVSVSKNMFETIARDLLLERTDHTLELYE---GSGS----NWRLVKSGTPGNLG 123
G+ L SV SK FE+ RDLLL R + +E+Y+ GS S +W L G+PGNL
Sbjct: 1 GTQKLESVVFSKMNFESFVRDLLLVR-HYRVEVYKNKAGSKSIKENDWYLAYKGSPGNLA 59
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+E+VLFANN+M +V + + + +G+GYVD T R L + EF D+ F+N+E+
Sbjct: 60 QFEEVLFANNDMSSAIGVVGVKLSTTDGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEA 119
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
LV LG KEC+LP + E LR + R G+++T+RKK +F T+D+VQDL+RL++
Sbjct: 120 LLVQLGPKECVLPG-GETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSK 178
Query: 244 VEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
E + + E +A +L A++ + ELLSDESN+G + + + L YM LD+AA++
Sbjct: 179 KEEQINSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQ 238
Query: 300 ALNVLESKTD-ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
ALN+ +S + AN SL GL+N+ C G+RL++ W+KQPL+D N I RL++V+AFV
Sbjct: 239 ALNLFQSSVENANTAQSLAGLLNK-CRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFV 297
Query: 359 DDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
D LRQ L++ L +R D+ RL +++ A LQ ++YQ+ +LP + AL+++EG
Sbjct: 298 VDPELRQCLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQLPNVVQALEKHEGA 357
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
L+ ++ PL + D +KF+ ++ET++D+D++EN E+++ +S+D L+ L+ +
Sbjct: 358 HQMLLLAVFITPLNDIFSD--FSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKM 415
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
LE ++ S K A +L L K++KL+ +QFGH FRIT KEE +R +++ +++
Sbjct: 416 NELEEKMQSYLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRN--NSKYGIVD 473
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K+GVKFTN+KL + D+Y K EEY+ Q +V +I A ++E +++ ++++LD
Sbjct: 474 TQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLD 533
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
++SFA +++ P PY RP I G I+L+G+RHPCVE QD V FIPND +GK
Sbjct: 534 AIVSFAHVSNGAPVPYVRPVILDKGQGRIVLKGARHPCVEVQDEVAFIPNDVTFEKGKQM 593
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +++ DCI ARVGAGD QL+GVS
Sbjct: 594 FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVTIVDCILARVGAGDSQLKGVS 653
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETASIL+ A++ SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATH
Sbjct: 654 TFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATH 713
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
FHELTALA Q+ V N HV+A ++ LTMLY+V+ G CDQSFGIHVAE
Sbjct: 714 FHELTALAD---------QVPTVNNLHVTAL--TSDDTLTMLYRVKEGVCDQSFGIHVAE 762
Query: 838 FANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP------NDMSRGAA 891
A FP+ V+ AREKA ELE+F +G ++ +P + G
Sbjct: 763 LAAFPKHVIESAREKALELEEFQ-----------NIGKSKESDGEPPAKKFYREREEGEK 811
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +PL M ++ ++K ++ D+
Sbjct: 812 IIQEFLCQVKALPLTDMSEEDIKMKLKELRSDV 844
>gi|119195125|ref|XP_001248166.1| hypothetical protein CIMG_01937 [Coccidioides immitis RS]
gi|392862590|gb|EAS36755.2| DNA mismatch repair protein msh-2 [Coccidioides immitis RS]
Length = 941
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/875 (43%), Positives = 551/875 (62%), Gaps = 32/875 (3%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ F+++LP +D+ VR FDR D+YTAHG +A +IA+T Y TT+ LR
Sbjct: 5 PELKVDDEV--GFIRFFRSLPSKDDSTTVRVFDRGDWYTAHGTDAEYIARTVYKTTSVLR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN----WRLVKSGTPGN 121
LG + + L SV+++ +F R+ L R +E++ G W+LVK +PGN
Sbjct: 63 TLGRSDTSGLPSVTMTVTVFRNFLREALF-RLGKRIEIWSSQGGMGKGVWKLVKQASPGN 121
Query: 122 LGSYEDVLFANNEMQDT-PVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
L ED L + M DT P+I+A+ + R + +G+ + D + R LG++EF D+ ++
Sbjct: 122 LQDVEDELGSGGGMMDTAPIILAVKISARASETRHVGVCFADASVRELGVSEFDDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ T+ K E +R CG+ ++ R ++F TRD+ QDL R
Sbjct: 182 NFESLVIQLGVKECLVTTDGQKKDVELAKIRSIADSCGIAISSRPASDFHTRDIDQDLSR 241
Query: 239 LVR----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L++ P DL ++A GA AL+ Y +SD SN+G Y + ++ L YM+LD
Sbjct: 242 LLKDERTAGTLPQTDL----KLAMGAAAALIKYLGAMSDPSNFGQYQLYQHDLSQYMKLD 297
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
SAA+RALN++ D K+ SL+GL+N C +G RLL WLKQPL++ +I R +V
Sbjct: 298 SAALRALNLMPGPRDGVKSMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHEDIEKRQQLV 356
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQ 412
+AFV DT LRQ +++ HL+ I D+ RL ++ A L+ +V++YQ IRLP +I +
Sbjct: 357 EAFVSDTELRQTMQEDHLRSIPDLYRLAKKFQRNAATLEDVVRIYQVVIRLPGFINTLEA 416
Query: 413 QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
+ Q+ ++E Y + +L++ K +VET+VDL+ L++ E++I +D L
Sbjct: 417 VMDEQYQEPLEEEYTSKIRNLSNS--FGKLAEMVETTVDLEALDHHEFIIKPEFDESLRI 474
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
++ + + L +H+ H++ DL+ +K L L+ G FR+T+ E IR K +
Sbjct: 475 IRKKLDKLRYDMHAEHRRVGRDLNQDTEKKLFLEDHRVHGWCFRLTRNEAGCIRNK--RE 532
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
+ T+K+GV FT + ++ L ++ ++ + Y Q LVN V+ A ++ + + LA +
Sbjct: 533 YQECSTQKNGVYFTTSTMQSLRREHDQLSQNYNRTQTGLVNEVVNVATSYCPLLEQLAGV 592
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
L+ LDV++SFA ++ PTPY RP ++P G+ IL+ +RHPC+E QD ++FI ND L+
Sbjct: 593 LAHLDVIVSFAHVSVHAPTPYVRPKVHPRGTGNTILKEARHPCMEMQDDISFITNDVSLV 652
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
R +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D Q
Sbjct: 653 RNESSFLIITGPNMGGKSTYIRQIGVVALMAQTGCFVPCSEAELTIFDCILARVGASDSQ 712
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH++ EIR
Sbjct: 713 LKGVSTFMAEMLETANILKTATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIRCFG 772
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS----RKLTMLYKVEPGACD 828
LFATHFHELTAL N +V +VS ++T+ R++T+LY+VEPG CD
Sbjct: 773 LFATHFHELTALEERYPNSVKNLHVVAFIGDNVSDKQNNTASKKKREVTLLYRVEPGVCD 832
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
QSFGIHVAE FPE VV +AR+KA ELEDFT +A
Sbjct: 833 QSFGIHVAELVRFPEKVVNMARQKAEELEDFTTAA 867
>gi|326477897|gb|EGE01907.1| DNA mismatch repair protein msh-2 [Trichophyton equinum CBS 127.97]
Length = 942
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/937 (41%), Positives = 568/937 (60%), Gaps = 43/937 (4%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+++L D VR FDR D+YTAHG +A +IA+T Y TT+ +R
Sbjct: 5 PELKVDDEV--GFIKFFRSLDAEDESTVRVFDRGDWYTAHGADAEYIARTVYKTTSVIRT 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE----GSGSNWRLVKSGTPGNLG 123
LG L+SV++S +F + R+ L R + ++++ SG W+L K +PGNL
Sbjct: 63 LGRSDSGLASVTLSVTVFRSFLREALF-RLNKRVQIWSSQNGASGRGWKLAKQASPGNLQ 121
Query: 124 SYEDVL---FANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L N M P+I+A+ + +G+ + D + R LG++EF+D+ ++
Sbjct: 122 DVEEELGGASGGNAMDTAPIILAVKAATKAKEMRHVGVCFADASVRELGVSEFVDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES L+ LG KECL+P E K E LR CGV +TER + F T+D+ QDL R
Sbjct: 182 NFESLLIQLGVKECLIPAEGQKKDVELAKLRQIADSCGVAITERPVSAFGTKDIEQDLSR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ P + ++A G+ AL+SY +SD SN+G Y + K+ L YM+LD++A+
Sbjct: 242 LLKDETGPAMLPQTDLKLAMGSASALISYLNAMSDPSNFGQYQLYKHDLAQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D+ KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 RALNLMPGPRDSMKNMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHKDIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
DT LRQ +++ HL+ I D+ RL ++ +A L+ +V++YQ IR+P +I S +
Sbjct: 361 IDTELRQTMQENHLRSIPDLYRLAKRFQRGKANLEDVVRVYQVVIRIPGFINSFEGVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ + + Y D L L+ D L K +VET+VDL+ L+N E++I +D L ++ +
Sbjct: 421 QYQTPLDAEYTDKLRKLSQD--LGKLAEMVETTVDLEALDNHEFIIKPEFDDSLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + S H++ DL +K L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRHDMDSEHRRVGRDLGQDTEKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSTMQALRREHDQLSMNYNRTQTGLVSEVVNVAASYCPLLEQLAGILAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA +++ PT Y RP I+P G+ IL+ +RHPC+E QD + FI ND LIR +S
Sbjct: 597 DVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKEARHPCMEMQDDITFITNDVSLIRDES 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GV
Sbjct: 657 SFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI+ +LFAT
Sbjct: 717 STFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIKCFSLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI---------DSTSRKLTMLYKVEPGAC 827
HFHELTAL V+N HV A I +++T+LY+VEPG C
Sbjct: 777 HFHELTALEERYPK--------AVSNLHVVAFIGDGPAAEGKQKKKQEVTLLYRVEPGVC 828
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMS 887
DQSFGIHVAE FP+ VV +AR+KA ELEDFT S D K + + ++ + P +++
Sbjct: 829 DQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSSGA-DGDGKQKTAAAVEKFT-PEEVA 886
Query: 888 RGAARAHQFLKEFS---DMP-LETMDLKEALERVKRM 920
G A L ++ + P E M ++E +R++ +
Sbjct: 887 EGNALLKAMLVKWKAEVEAPGSENMSMEEKKQRLREL 923
>gi|303310697|ref|XP_003065360.1| DNA mismatch repair protein msh-2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105022|gb|EER23215.1| DNA mismatch repair protein msh-2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320034786|gb|EFW16729.1| DNA mismatch repair protein Msh2 [Coccidioides posadasii str.
Silveira]
Length = 941
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/871 (43%), Positives = 548/871 (62%), Gaps = 24/871 (2%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ F+ +LP +D+ VR FDR D+YTAHG +A +IA+T Y TT+ LR
Sbjct: 5 PELKVDDEV--GFIRFFHSLPSKDDSTTVRVFDRGDWYTAHGTDAEYIARTVYKTTSVLR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN----WRLVKSGTPGN 121
LG + + L SV+++ +F R+ L R +E++ G W+LVK +PGN
Sbjct: 63 TLGRSDTSGLPSVTMTVTVFRNFLREALF-RLSKRIEIWSSQGGMGKGVWKLVKQASPGN 121
Query: 122 LGSYEDVLFANNEMQDT-PVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
L ED L + M DT P+I+A+ + R + +G+ + D + R LG++EF D+ ++
Sbjct: 122 LQDVEDELGSGGGMMDTAPIILAVKISARASETRHVGVCFADASVRELGVSEFDDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ T+ K E +R CG+ ++ R ++F TRD+ QDL R
Sbjct: 182 NFESLVIQLGVKECLVTTDGQKKDVELAKIRSIADSCGIAISSRPASDFHTRDIDQDLSR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++G + ++A GA AL+ Y +SD SN+G Y + ++ L YM+LDSAA+
Sbjct: 242 LLKGERTAGTLPQTDLKLAMGAAAALIKYLGAMSDPSNFGQYQLYQHDLSQYMKLDSAAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D K+ SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 RALNLMPGPRDGVKSMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHEDIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
DT LRQ +++ HL+ I D+ RL ++ A L+ +V++YQ IRLP +I + +
Sbjct: 361 SDTELRQTMQEDHLRSIPDLYRLAKKFQRNAATLEDVVRIYQVVIRLPGFINTLEAVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ ++E Y + +L++ K +VET+VDL+ L++ E++I +D L ++ +
Sbjct: 421 QYQEPLEEEYTSKIRNLSNS--FGKLAEMVETTVDLEALDHHEFIIKPEFDESLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + + H++ DL+ +K L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRYDMDAEHRRVGRDLNQDTEKKLFLEDHRVHGWCFRLTRNEAGCIRNK--REYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ + Y Q LVN V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSTMQSLRREHDQLSQNYNRTQTGLVNEVVNVAASYCPLLEQLAGVLAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA ++ PTPY RP ++P G+ IL+ +RHPC+E QD ++FI ND L+R +S
Sbjct: 597 DVIVSFAHVSVHAPTPYVRPKVHPRGTGNTILKEARHPCMEMQDDISFITNDVSLVRNES 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D QL+GV
Sbjct: 657 SFLIITGPNMGGKSTYIRQIGVVALMAQTGCFVPCSEAELTIFDCILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH++ EIR LFAT
Sbjct: 717 STFMAEMLETANILKTATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIRCFGLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS----RKLTMLYKVEPGACDQSFG 832
HFHELTAL N +V +VS ++T+ R++T+LY+VEPG CDQSFG
Sbjct: 777 HFHELTALEERYPNSVKNLHVVAFIGDNVSDKQNNTASKKKREVTLLYRVEPGVCDQSFG 836
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPSA 863
IHVAE FPE VV +AR+KA ELEDFT +A
Sbjct: 837 IHVAELVRFPEKVVNMARQKAEELEDFTTAA 867
>gi|326914909|ref|XP_003203765.1| PREDICTED: DNA mismatch repair protein Msh2-like [Meleagris
gallopavo]
Length = 873
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/873 (43%), Positives = 558/873 (63%), Gaps = 48/873 (5%)
Query: 71 GSDALSSVSVSKNMFETIARDLLLERTDHTLELYE---GSGS----NWRLVKSGTPGNLG 123
G+ L SV +SK FE+ RDLLL R + +E+Y+ GS S +W L G+PGNL
Sbjct: 11 GNQKLESVVLSKMNFESFVRDLLLVR-HYRVEVYKNKAGSKSVKENDWYLAYKGSPGNLA 69
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+E+VLFANN+M +V + + + IG+GYVD T R L + EF D+ F+N+E+
Sbjct: 70 QFEEVLFANNDMSMAIGVVGVKLSSADGQRVIGVGYVDTTLRKLSVCEFPDNDQFSNLEA 129
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
LV LG KEC+LP + E LR + R G+++T+RKK +F T+D+VQDL+RL++
Sbjct: 130 LLVQLGPKECVLPG-GDTAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSR 188
Query: 244 VEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
+ + E +A +L A++ + ELLSD+SN+G + + + L YM LD+AA++
Sbjct: 189 KGEQMNSAALPEMEKQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDLSQYMVLDNAAVQ 248
Query: 300 ALNVLESKTD-ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
ALN+ +S + AN SL GL+N+ C G+RL++ W+KQPL+D N I RL++V+AFV
Sbjct: 249 ALNLFQSSVENANNTQSLAGLLNK-CRTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFV 307
Query: 359 DDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
+DT LRQ L++ L +R D+ RL +++ A LQ ++YQ+ +LP + AL+++EG
Sbjct: 308 EDTELRQGLQEDLLRRFPDLNRLAKRFQRQAATLQDCYRMYQAINQLPNVVQALEKHEGA 367
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
L+ ++ PL + D +KF+ ++ET++D+D++EN E+++ +S+D L+ L+ +
Sbjct: 368 HQMLLLAVFITPLNDIHSD--FSKFLEMIETTLDMDKVENHEFLVKASFDPNLTELREKM 425
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
LE + +L K A +L L K++KL+ +QFGH FRIT KEE +R +++ + +
Sbjct: 426 NELEENMQTLLKSAAKELGLEAGKSIKLESNSQFGHHFRITCKEEKVLRN--NSKYKITD 483
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K+GVKFTN+KL + + Y K EEY+ Q +V +I A ++E +++ ++++LD
Sbjct: 484 TQKNGVKFTNSKLSAINEDYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLD 543
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
++SFA +++ P PY RP + G I+L+G+RHPC+E QD V FIPND +GK
Sbjct: 544 AIVSFAHVSNGAPVPYVRPVVLEKGQGRIVLKGARHPCIEVQDEVAFIPNDVTFEKGKQM 603
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPCD A I++ DCI ARVGAGD QL+GVS
Sbjct: 604 FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILARVGAGDSQLKGVS 663
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETASIL+ A++ SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATH
Sbjct: 664 TFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAFCMFATH 723
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
FHELTALA Q+ V N HV+A ++ LTMLY+V+ G CDQSFGIHVAE
Sbjct: 724 FHELTALAD---------QVPTVNNLHVTAL--TSDDTLTMLYRVKAGVCDQSFGIHVAE 772
Query: 838 FANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP------NDMSRGAA 891
A FP+ V+ AREKA ELE+F ++G ++ +P + G
Sbjct: 773 LAAFPKHVIENAREKALELEEFQ-----------DLGRPKESEGEPAAKKCYREREEGEK 821
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +PL M ++ ++K+++ D+
Sbjct: 822 IIQDFLCQVKALPLTDMSEEDIKTKLKQLRADV 854
>gi|327308508|ref|XP_003238945.1| DNA mismatch repair protein Msh2 [Trichophyton rubrum CBS 118892]
gi|326459201|gb|EGD84654.1| DNA mismatch repair protein Msh2 [Trichophyton rubrum CBS 118892]
Length = 942
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/880 (43%), Positives = 540/880 (61%), Gaps = 37/880 (4%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+++L D VR FDR D+YTAHG +A +IA+T Y TT+ +R
Sbjct: 5 PELKVDDEV--GFIKFFRSLNAEDESTVRVFDRGDWYTAHGADAEYIARTVYKTTSVIRT 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE----GSGSNWRLVKSGTPGNLG 123
LG L+SV++S +F + R+ L R + ++++ SG W+L K +PGNL
Sbjct: 63 LGRSDSGLASVTLSITVFRSFLREALF-RLNKRVQIWSSQNGASGRGWKLAKQASPGNLQ 121
Query: 124 SYEDVL---FANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L N M P+I+A+ + +G+ + D + R LG++EF+D+ ++
Sbjct: 122 DVEEELGGASGGNAMDTAPIILAVKAATKAKEMRHVGVCFADASVRELGVSEFVDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES L+ LG KECL+P E K E LR CGV +TER F T+D+ QDL R
Sbjct: 182 NFESLLIQLGVKECLIPAEGQKKDVELAKLRQIADSCGVAITERPAGAFGTKDIEQDLSR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ P + ++A G+ AL+SY +SD SN+G Y + K+ L YM+LD++A+
Sbjct: 242 LLKDETGPAMLPQTDLKLAMGSASALISYLNSMSDPSNFGQYQLYKHDLAQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D+ KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 RALNLMPGPRDSMKNMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHKDIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
DT LRQ +++ HL+ I D+ RL ++ +A L+ +V++YQ IR+P +I S +
Sbjct: 361 TDTELRQTMQENHLRSIPDLYRLAKRFQRGKANLEDVVRVYQVVIRIPGFINSFEGVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ + + Y D L L+ D L K +VET+VDL+ L+N E++I +D L ++ +
Sbjct: 421 QYQTPLDAEYTDKLRKLSQD--LGKLAEMVETTVDLEALDNHEFIIKPEFDDSLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + S H++ DL +K L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRHDMDSEHRRVGRDLGQDTEKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ Y Q LV V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSTMQALRREHDQLSMNYNRTQTGLVGEVVNVAASYCPLLEQLAGILAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA +++ PT Y RP I+P G+ IL+ +RHPC+E QD + FI ND LIR +S
Sbjct: 597 DVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKEARHPCMEMQDDITFITNDVSLIRDES 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GV
Sbjct: 657 SFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI+ +LFAT
Sbjct: 717 STFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIKCFSLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI---------DSTSRKLTMLYKVEPGAC 827
HFHELTAL V+N HV A I ++++T+LY+VEPG C
Sbjct: 777 HFHELTALEERYPK--------AVSNLHVVAFIGDGPAAEGKQKKNQEVTLLYRVEPGVC 828
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
DQSFGIHVAE FP+ VV +AR+KA ELEDFT S D
Sbjct: 829 DQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSSGADGD 868
>gi|302501199|ref|XP_003012592.1| hypothetical protein ARB_01205 [Arthroderma benhamiae CBS 112371]
gi|291176151|gb|EFE31952.1| hypothetical protein ARB_01205 [Arthroderma benhamiae CBS 112371]
Length = 942
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/880 (43%), Positives = 542/880 (61%), Gaps = 37/880 (4%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+++L D VR FDR D+YTAHG +A +IA+T Y TT+ +R
Sbjct: 5 PELKVDDEV--GFIKFFRSLDAEDESTVRVFDRGDWYTAHGADAEYIARTVYKTTSVIRT 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE----GSGSNWRLVKSGTPGNLG 123
LG L+SV++S +F + R+ L R + ++++ SG W++ K +PGNL
Sbjct: 63 LGRSDSGLASVTLSVTVFRSFLREALF-RLNKRVQIWSSQNGASGRGWKMAKQASPGNLQ 121
Query: 124 SYEDVL---FANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L N M P+I+A+ + +G+ + D + R LG++EF+D+ ++
Sbjct: 122 DVEEELGGASGGNAMDTAPIILAVKAATKAKEMRHVGVCFADASVRELGVSEFVDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES L+ LG KECL+P E K E LR CGV +TER + F T+D+ QDL R
Sbjct: 182 NFESLLIQLGVKECLIPAEGQKKDVELAKLRQIADSCGVAITERPVSAFGTKDIEQDLSR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ P + ++A G+ AL+SY +SD SN+G Y + K+ L YM+LD++A+
Sbjct: 242 LLKDETGPAMLPQTDLKLAMGSASALISYLNAMSDPSNFGQYQLYKHDLAQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D+ KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 RALNLMPGPRDSMKNMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHKDIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
DT LRQ +++ HL+ I D+ RL ++ +A L+ +V++YQ IR+P +I S +
Sbjct: 361 TDTELRQTMQESHLRSIPDLYRLAKRFQRGKANLEDVVRVYQVVIRIPGFINSFEGVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ + + Y D L L+ D L K +VET+VDL+ L+N E++I +D L ++ +
Sbjct: 421 QYQTPLDAEYTDKLRKLSQD--LGKLAEMVETTVDLEALDNHEFIIKPEFDDSLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + S H++ DL +K L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRHDMDSEHRRVGRDLGQDTEKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSTMQALRREHDQLSMNYNRTQTGLVSEVVNVAASYCPLLEQLAGILAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA +++ PT Y RP I+P G+ IL+ +RHPC+E QD + FI ND LIR +S
Sbjct: 597 DVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKEARHPCMEMQDDITFITNDVSLIRDES 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GV
Sbjct: 657 SFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI+ +LFAT
Sbjct: 717 STFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIKCFSLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI---------DSTSRKLTMLYKVEPGAC 827
HFHELTAL V+N HV A I +++T+LY+VEPG C
Sbjct: 777 HFHELTALEERYPK--------AVSNLHVVAFIGDGPAAEGKQKKKQEVTLLYRVEPGVC 828
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
DQSFGIHVAE FP+ VV +AR+KA ELEDFT S S+
Sbjct: 829 DQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSSGADSE 868
>gi|302657750|ref|XP_003020589.1| hypothetical protein TRV_05311 [Trichophyton verrucosum HKI 0517]
gi|291184439|gb|EFE39971.1| hypothetical protein TRV_05311 [Trichophyton verrucosum HKI 0517]
Length = 942
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/880 (43%), Positives = 541/880 (61%), Gaps = 37/880 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+++L D VR FDR D+YTAHG +A +IA+T Y TT+ +R
Sbjct: 5 PELKVDDEV--GFIKFFRSLDVEDESTVRVFDRGDWYTAHGVDAEYIARTVYKTTSVIRT 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE----GSGSNWRLVKSGTPGNLG 123
LG L+SV++S +F + R+ L R + ++++ SG W++ K +PGNL
Sbjct: 63 LGRSDSGLASVTLSVTVFRSFLREALF-RLNKRVQIWSSQNGASGRGWKMAKQASPGNLQ 121
Query: 124 SYEDVL---FANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L N M P+I+A+ + +G+ + D + R LG++EF+D+ ++
Sbjct: 122 DVEEELGGASGGNAMDTAPIILAVKAATKAKEMRHVGVCFADASVRELGVSEFVDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES L+ LG KECL+P E K E LR CGV +TER + F T+D+ QDL R
Sbjct: 182 NFESLLIQLGVKECLIPAEGQKKDVELAKLRQIADSCGVAITERPVSAFGTKDIEQDLSR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ P + ++A G+ AL+SY +SD SN+G Y + K+ L YM+LD++A+
Sbjct: 242 LLKDETGPAMLPQTDLKLAMGSASALISYLNAMSDPSNFGQYQLYKHDLAQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D+ KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 RALNLMPGPRDSMKNMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHKDIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
DT LRQ +++H L+ I D+ RL ++ +A L+ +V++YQ IR+P +I S +
Sbjct: 361 TDTELRQTMQEHHLRSIPDLYRLAKRFQRGKANLEDVVRVYQVVIRIPGFINSFEGVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ + + Y D L L+ D L K +VET+VDL+ L+N E++I +D L ++ +
Sbjct: 421 QYQTPLDAEYTDKLRKLSQD--LGKLAEMVETTVDLEALDNHEFIIKPEFDDSLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + S H++ DL +K L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRHDMDSEHRRVGRDLGQDTEKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSTMQALRREHDQLSMNYNRTQTGLVSEVVNVAASYCPLLEQLAGILAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA +++ PT Y RP I+P G+ IL+ +RHPC+E QD + FI ND LIR +S
Sbjct: 597 DVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKEARHPCMEMQDDITFITNDVSLIRDES 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GV
Sbjct: 657 SFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI+ +LFAT
Sbjct: 717 STFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIKCFSLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI---------DSTSRKLTMLYKVEPGAC 827
HFHELTAL V+N HV A I +++T+LY+VEPG C
Sbjct: 777 HFHELTALEERYPK--------AVSNLHVVAFIGDGPAAEGKQKKKQEVTLLYRVEPGVC 828
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
DQSFGIHVAE FP+ VV +AR+KA ELEDFT S D
Sbjct: 829 DQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSSGADGD 868
>gi|428168656|gb|EKX37598.1| Msh2 mismatch repair muts-like protein, meiosis and mitosis
[Guillardia theta CCMP2712]
Length = 982
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/978 (41%), Positives = 592/978 (60%), Gaps = 115/978 (11%)
Query: 9 PELKLDAKQARGFLSFYKTLPND-TRAVRFFDRR---DYYTAHGENATFIAKTYYHTTTA 64
P L+LD +A+GF++F+K +P +R +RFF R+ ++Y+ HGE+A +IA+ +HT +
Sbjct: 42 PSLQLDVGEAQGFIAFFKNMPEPASRTIRFFYRKKEGEFYSCHGEDAVYIAQECFHTMSV 101
Query: 65 LRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSGSNWRLVKSGTPGN 121
L+ +G ++ L +V+VS + F + LL ER + +E++ +G + W +++ G+PGN
Sbjct: 102 LKHIGKNNE-LPAVAVSPSNFNSFVVQLLTER-QYRVEVWADVKGGKNGWTIIRQGSPGN 159
Query: 122 LGSYEDVLFAN-NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
L +E+++F E Q+TP +V + G +GL Y D T +++G+ EFLD TN
Sbjct: 160 LEEFEEIVFDTCGETQETPTVVCVQIVSDGAGWRVGLAYCDNTLKIIGVCEFLDGDQLTN 219
Query: 181 VESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
+E+ALV LG KEC+ + ++S E K LR+ RC V+LTERK +F T+D+ QDL+RL
Sbjct: 220 LEAALVRLGTKECVAAEDKMRSPVEGKKLREIFDRCDVVLTERKSRDFSTKDINQDLNRL 279
Query: 240 VRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
+ E + + E A + L+ Y +LLSDE + +++ LD YM+LD
Sbjct: 280 L--GPESCKLINMEDENALSSAACLIRYLDLLSDERKF---KLQELKLDRYMKLDKVEK- 333
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
+ D N+N S++ L+N+ C +G RLL W+KQPLLD EI RLD+V+ FV+
Sbjct: 334 -----DEAQDGNRNMSVYTLLNK-CKTHIGSRLLLRWIKQPLLDPQEIETRLDLVETFVN 387
Query: 360 DTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQF 418
D LRQ +++ +L+ + D+ RL + AL+ E
Sbjct: 388 DVQLRQSMQEIYLRHVPDLARLARKFQ------------------------ALEDCETSK 423
Query: 419 SSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSY------------ 466
SL+KE+ +DPL+SL DD ++ LVE S+DL+ ++N EY I+ +Y
Sbjct: 424 GSLMKEKMVDPLKSLEDD--FKQYERLVEQSLDLEGIDNHEYRINPNYRQESRKGRDREE 481
Query: 467 --DTG-----------------------------LSALKNEQESLERQIH-----SLHKQ 490
D+G LK ++ ++ +I S K+
Sbjct: 482 FEDSGGERERWMFYLTFHGAVLISSVWRRGRRSFEETLKGKRTDIQHEIFVDSSCSERKK 541
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
A+ L L +K +KL++ ++FRIT+K+E +R K + F VLETRKDGVKFT+T L
Sbjct: 542 AANKLGLGEEK-VKLERNKDKIYIFRITRKDEKVLRGKCGS-FSVLETRKDGVKFTSTGL 599
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
+ L ++Y++ + Y Q LV +V++ T++ +SL+ +++E+DVL+S A +AS+ P
Sbjct: 600 RPLSERYKEADDSYSEIQTSLVEKVVEVISTYAPAVESLSEVIAEIDVLVSLAHVASNAP 659
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
T Y RP ++P GD+IL+ SRHPCVE D V+FIPND +L+R S QIITGPNMGGKS
Sbjct: 660 TQYVRPLLSPAGQGDLILKESRHPCVEVMDDVSFIPNDIELLRSSSRLQIITGPNMGGKS 719
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T+IRQ GV +LMAQ+GSFVPC A IS+ I AR+GAGD QL+GVSTFMQEML+T+SIL
Sbjct: 720 TYIRQAGVIVLMAQIGSFVPCSSAEISICHSIHARIGAGDNQLKGVSTFMQEMLDTSSIL 779
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
ATD+SLIIIDELGRGTSTYDGFGLAWAI EH+ IRAP LFATHFHELT L E
Sbjct: 780 SSATDKSLIIIDELGRGTSTYDGFGLAWAIAEHIASSIRAPCLFATHFHELTEL--EGKA 837
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
E V N HV+AH+ KLTMLY+V GACDQSFGIHVAE A FPE VV +AR
Sbjct: 838 E-------AVTNRHVTAHV--ADGKLTMLYQVRKGACDQSFGIHVAELAKFPEHVVEMAR 888
Query: 851 EKAAELEDFTPSAVISDDAKIEVGSKRKRISDP----NDMSRGAARAHQFLKEFSDMPLE 906
+KA +LE F ++ ++DA E SK+++ + D G+ QFLK+FS +P +
Sbjct: 889 QKAEQLEMFGNASSSNEDAVGEPASKKRKTDEAAGEQGDHEEGSRLILQFLKDFSALPFD 948
Query: 907 TMDLKEALERVKRMKDDL 924
++ EA RV++M+D++
Sbjct: 949 SLAPSEACLRVRQMRDEM 966
>gi|212528164|ref|XP_002144239.1| DNA mismatch repair protein Msh2, putative [Talaromyces marneffei
ATCC 18224]
gi|111380652|gb|ABH09703.1| MSH2-like protein [Talaromyces marneffei]
gi|210073637|gb|EEA27724.1| DNA mismatch repair protein Msh2, putative [Talaromyces marneffei
ATCC 18224]
Length = 944
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/878 (43%), Positives = 548/878 (62%), Gaps = 40/878 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-------DTRAVRFFDRRDYYTAHGENATFIAKTYYHT 61
PELK+D + GF+ F+++LP+ + +R FDR D+YTAHG +A FIA+T Y T
Sbjct: 5 PELKVDDEP--GFIRFFRSLPSKDAINESNPTTIRLFDRGDWYTAHGTDAEFIARTVYKT 62
Query: 62 TTALRQLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSGSNWRLVKSG 117
T+ LR LG + S L SV++S +F R+ L R + +E++ E W+L K
Sbjct: 63 TSVLRTLGRSDSGGLPSVTLSVTVFRNFLREALF-RLNKRIEIWVSAESGRGQWKLGKQA 121
Query: 118 TPGNLGSYEDVL--FANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLD 174
+PGNL E+ L + M P+I+A+ + R + IG+ + D + R LG++EFLD
Sbjct: 122 SPGNLQDVEEELGGAGGSAMDSAPIILAVKVSARSSEAKNIGVCFADASVRELGVSEFLD 181
Query: 175 DSHFTNVESALVALGCKECLLPTEAVKS-SECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
+ ++N ES ++ LG KEC++ ++ K +E LR CGV +TER +F TRD+
Sbjct: 182 NDVYSNFESLVIQLGVKECVIQLDSTKKDAELAKLRAIADTCGVAITERPMADFGTRDIE 241
Query: 234 QDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
QDL RL+R + ++A GA AL+ Y ++SD +N+G Y + ++ L YM+L
Sbjct: 242 QDLTRLLRDERSAATLPQTELKLAMGAAAALIKYLGVMSDSTNFGQYQLYQHDLSQYMKL 301
Query: 294 DSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
D+AA+RALN++ D KN SL+GL+N C +G RLL WLKQPL+D EI R +
Sbjct: 302 DAAALRALNLMPGPRDGAKNMSLYGLLNH-CKTPVGSRLLAQWLKQPLMDQAEIEKRHQL 360
Query: 354 VQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSAL 411
V+AFV DT LRQ +++ HL+ I D+ RL ++ +A L+ +V++YQ +IRLP ++RS
Sbjct: 361 VEAFVVDTELRQTMQEEHLRAIPDLYRLAKRFQRSQANLEDVVRVYQVAIRLPGFVRSFE 420
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+ Q+ + + ++Y L +L++ L K +VET+VDLD L N E++I +D L
Sbjct: 421 NVMDEQYQTPLDDQYTTKLRNLSNS--LAKLEEMVETTVDLDALANHEFIIKPEFDDSLR 478
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + + L + H++ A DL+ ++K L ++ G FR+T+ E IR K
Sbjct: 479 VIRKKLDKLRYDMDLEHRRVAKDLNQDMEKKLFMENHRVHGWCFRLTRNEAGCIRNK--R 536
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
++ T+K+GV FT +++L ++ ++ Y Q LV V+ A ++ + + LA
Sbjct: 537 EYQECSTQKNGVYFTTRTMQELRREHDQLSSNYNRTQSGLVQEVVNVATSYCPVLEQLAG 596
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LDV++SFA ++ PT Y RP ++P G+ IL+ +RHPC+E QD ++FI ND L
Sbjct: 597 ILAHLDVIVSFAHVSVHAPTAYARPKMHPRGTGNTILKEARHPCMEMQDDISFITNDVSL 656
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+RG+S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D
Sbjct: 657 VRGESSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCTEAELTIFDCILARVGASDS 716
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI
Sbjct: 717 QLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIGCF 776
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-------DSTSRKLTMLYKVEP 824
+FATHFHELTALA V N HV A I + R++T+LY+VEP
Sbjct: 777 GMFATHFHELTALADRYPK--------SVKNLHVVAFISDAKEGESNKKREVTLLYRVEP 828
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
G CDQSFGIHVAE FPE VV +AR+KA ELEDFT +
Sbjct: 829 GVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTTA 866
>gi|340375398|ref|XP_003386222.1| PREDICTED: DNA mismatch repair protein Msh2-like [Amphimedon
queenslandica]
Length = 906
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/912 (42%), Positives = 570/912 (62%), Gaps = 37/912 (4%)
Query: 21 FLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
F F++++P +R FDR DYYTAHG + F+AK + +T+ + G+ + + SVS
Sbjct: 10 FTRFFRSMPEKPETTIRVFDRGDYYTAHGNDGLFVAKEVFGSTSVAKYYGSEGNKVPSVS 69
Query: 80 VSKNMFETIARDLLLERTDHTLELYEG---SGSNWRLVKSGTPGNLGSYEDVLFANNEMQ 136
+SK FE+ ARDLLL + + +E+Y SG++W +PGNL ED++F +N
Sbjct: 70 LSKLKFESFARDLLLVK-KYRIEVYRNKVKSGNDWFPAYKASPGNLQQLEDIIFNSNLQG 128
Query: 137 DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLP 196
D+ +A+ + ++ +G+ + D + + L + +F+++ +F N ES LV +G KECLL
Sbjct: 129 DSCTAMAIRLSSKDGQRVVGVAFSDFSSQELKVCQFVENDNFANFESLLVQIGPKECLLV 188
Query: 197 TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG---SVEPVRDLVSG 253
+ ++E ++ L + +++TERK+++F ++D+VQDL+RL++ S P +L
Sbjct: 189 AKDT-NTEAGIMKKTLQKANILITERKRSDFNSKDIVQDLNRLLKTENCSSLPELELSLS 247
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
E AL A++ Y ELLSDE N+ ++ + ++ ++ YMRLD+AA ALNV E+ N+
Sbjct: 248 ME----ALSAIIKYLELLSDERNFNSFSLSQFDMNRYMRLDTAASLALNV-EAGQGENQA 302
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLK 372
+SL G++N T + G+RLL W+KQPL D+ I R ++V+ FVD LRQ ++ + LK
Sbjct: 303 YSLLGVLNHT-RSPQGQRLLRQWIKQPLTDLKHIVERQNLVELFVDTVTLRQSVQGRSLK 361
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLES 432
I D+ RL L++ + LQ V +YQ+ LP + L Y G SL+KE ++ PLE
Sbjct: 362 IIPDLFRLSKKLQQGKGTLQDCVIIYQAVQILPTLTDVLNSYNGNHESLLKEVFITPLEE 421
Query: 433 LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
L DD K+ ++ET++DLD +++ EY+I S+D L L++ S+E +++ ++K+TA
Sbjct: 422 LADD--FIKYREMIETTIDLDMIQHHEYLIKPSFDEELQKLRDNMSSIEEKMNVIYKKTA 479
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
SDL L V K LKL+ + G+ R++KK E IR + +FIVL+ R +GV+FT + LK
Sbjct: 480 SDLSLDVGKTLKLESNSHLGYYMRLSKKTEKLIRGQ--KRFIVLDARNEGVRFTVSPLKV 537
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
L ++YQ + Y Q + V+Q A ++ + + + +D L S A+ A+S P
Sbjct: 538 LSEEYQGLQRVYNQQQDKFAREVVQIASGYTGPILTFNDLTAHIDALTSLAEAATSSPLG 597
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
Y RP I G+I+L G+RHPC+E QD ++FI ND L+RG+ FQIITGPNMGGKST+
Sbjct: 598 YIRPSITDKGTGNIVLTGARHPCLEKQDDISFIANDVSLLRGEDEFQIITGPNMGGKSTY 657
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
IR +GV +LMAQVGSFVPC A+IS+ D I ARVGAGD QL+GVSTFM EMLETA+ILK
Sbjct: 658 IRMIGVIVLMAQVGSFVPCTSANISIVDSILARVGAGDSQLKGVSTFMSEMLETATILKT 717
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT SLIIIDELGRGTSTYDGFGLAWAI +H+ +I LFATHFHELT+L
Sbjct: 718 ATRNSLIIIDELGRGTSTYDGFGLAWAISQHIATQIHCFCLFATHFHELTSL-------- 769
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+ + V+N HV+A I S+ LT+LYKV G DQSFGI VAE A+FP V++ AR+K
Sbjct: 770 -SDTVPTVSNRHVTA-ITSSDNTLTLLYKVNKGVSDQSFGIQVAEMAHFPSEVISYARQK 827
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKE 912
AAELE F S D E +K++R ++ G +L+ + LETM E
Sbjct: 828 AAELELFYNKGEGSID---EPTAKKRR----TEIKEGEELIDSYLRRIDALSLETMTDSE 880
Query: 913 ALERVKRMKDDL 924
E ++ M++++
Sbjct: 881 ITEELRSMREEI 892
>gi|410927598|ref|XP_003977228.1| PREDICTED: DNA mismatch repair protein Msh2-like [Takifugu
rubripes]
Length = 937
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/931 (41%), Positives = 574/931 (61%), Gaps = 40/931 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
L +D+ GF++F +LP+ DT R FDR D+YT HG++A + A+ + T ++ L
Sbjct: 9 LSMDSAAESGFVNFVFSLPDKPDT-TFRVFDRSDFYTVHGKDAIYAAREVFKTNGVIKYL 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE--GSGS---NWRLVKSGTPGNLG 123
G+GS L SV +SK FE +ARDLLL R + +E+Y+ G GS +WR+ +PGNL
Sbjct: 68 GSGSRRLESVVLSKLNFEALARDLLLVR-QYRVEVYKNHGKGSKDHDWRVEYKASPGNLT 126
Query: 124 SYEDVLFANNEMQDT--PVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+E+VLF + + V+ F + +G+GYVD +R +G+ EF D+ F+N+
Sbjct: 127 QFEEVLFGSGSGSEACAGVVAVRFAAGADGQRVVGVGYVDAAQRTMGVCEFPDNEIFSNL 186
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ LV + KECLL + ++ LR+ + R G +++ERKK EF ++DLVQDL+RL+R
Sbjct: 187 EALLVQISPKECLL-AQGDGGADGSKLREVVQRGGALVSERKKAEFHSKDLVQDLNRLLR 245
Query: 242 ---GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G R L ++A L A++ + ELLSDESN+G++ + L YMRLD+AA
Sbjct: 246 AKKGQSVSSRTLPELDKQVAVSCLAAVVRFLELLSDESNFGSFSLTSLDLSQYMRLDNAA 305
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D+ SL GL+N+ C G+RLL W+KQPLLD I RLD+V++
Sbjct: 306 VRALNLFQGSPDDSAGTHSLAGLLNK-CRTPQGQRLLQQWIKQPLLDRTRIEERLDLVES 364
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
V D+ LRQ ++ L +R D+ RL ++ A LQ ++YQ+ + + SAL ++
Sbjct: 365 LVGDSELRQTCQEDLLRRFPDLHRLSRKFQRHSATLQDCYRVYQAVHHVAALLSALDRHA 424
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L+ ++ PL L D K+ ++ET++D++Q+E+ E++I +S+D LS L++
Sbjct: 425 GRHQALMDAVFISPLRDLQSD--FGKYQEMIETTLDMNQVEHHEFLIKASFDPALSDLRS 482
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ + +E+ + ++ A +L L K +KL+ G R+T KEE +R +F +
Sbjct: 483 KMDEMEKSMQAVLSSAARELGLDAGKTVKLESNAALGFYLRVTCKEEKVLRN--NKKFTM 540
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
L+ +K+GV+FTN KL + + Y K EY+ Q +V +I A + + ++L+ + ++
Sbjct: 541 LDVQKNGVRFTNGKLSSINEDYTKSRAEYEEAQNAIVKEIINIAAGYVDPLQALSDVTAQ 600
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGD--IILEGSRHPCVEAQDWVNFIPNDCKLIR 653
LD ++SFA + S P PY RP++ + G + L +RHPC+EA FIPND ++
Sbjct: 601 LDAVVSFAVASVSAPVPYVRPELLGEEGGPRRVALLQARHPCMEADADTAFIPNDITFVQ 660
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
G+ F IITGPNMGGKSTFIRQVGV LMAQ+G FVPC+RA +SV D I ARVGAGD Q+
Sbjct: 661 GQKSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCERAELSVIDSILARVGAGDSQV 720
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+GVSTFM EMLETA+IL+ AT SLIIIDELGRGTSTYDGFGLAWAI +H+ IR L
Sbjct: 721 KGVSTFMAEMLETAAILRSATANSLIIIDELGRGTSTYDGFGLAWAISQHIAAAIRCFCL 780
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FA+HFHELTALA Q V N HV+A ++ LTMLY+V PG CDQSFGI
Sbjct: 781 FASHFHELTALA---------AQQPTVHNLHVTAL--TSQNTLTMLYRVRPGVCDQSFGI 829
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
HVAE A+FP +VV +A++KA ELE+F +A + + +KR+R+ D G
Sbjct: 830 HVAELASFPPAVVAMAKDKAEELEEFQEAAGGKWEQEEGGEAKRRRL----DKQVGEKLI 885
Query: 894 HQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P+ +M E ++RMK +L
Sbjct: 886 QDFLDKARSLPVSSMSEDEVKAELRRMKQEL 916
>gi|225560675|gb|EEH08956.1| DNA mismatch repair protein msh-2 [Ajellomyces capsulatus G186AR]
Length = 941
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/882 (43%), Positives = 551/882 (62%), Gaps = 47/882 (5%)
Query: 10 ELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
ELKLD + GF+ F+++LP +D+ +R FDR D++TAHG +A +IA+T Y TT+ L+
Sbjct: 6 ELKLDDEG--GFIRFFRSLPAKDDSSTIRIFDRGDFFTAHGPDAEYIARTVYKTTSVLKS 63
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY--EGSG-SNWRLVKSGTPGNLG 123
LG + S L SV+++ +F R+ L R + +E++ +G G +NW+L K +PGNL
Sbjct: 64 LGRSDSSGLPSVTMTTTVFRNFLRESLF-RLNMRVEIWVSQGGGKTNWKLAKQASPGNLQ 122
Query: 124 SYEDVLFANNEMQDT-PVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L A+ D+ P+I+A+ + + + +G+ + D + R LG++EF+D+ ++N
Sbjct: 123 DVEEELGASGPAMDSAPIILAVKISAKASEARQVGVCFADASVRELGVSEFVDNDLYSNF 182
Query: 182 ESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
ES ++ LG KECL+ E+ K E LR L CG+ +++R +F T+D+ QDL RL+
Sbjct: 183 ESLVIQLGVKECLIMMESQKKDVELGKLRSILDNCGIAISQRPMADFGTKDIEQDLSRLL 242
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
R + P D F++A GA AL+ Y +SD +N+G Y + ++ L YM+LD+A
Sbjct: 243 RDERVAGILPQTD----FKLAMGAAAALIKYLGAMSDATNFGQYRLYQHDLSQYMKLDAA 298
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A+RALN++ D KN SL+GL+N C +G RLL WLKQPL++ +I R +V+A
Sbjct: 299 ALRALNLMPGPRDGAKNMSLYGLLNH-CKTPVGSRLLAQWLKQPLMNHEDIEKRQQLVEA 357
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQY 414
FV DT LRQ +++ HL+ I D+ RL ++ A L+ +V++YQ IRLP +I +
Sbjct: 358 FVVDTELRQTMQEDHLRSIPDLYRLAKRFQRDMANLEDVVRVYQVVIRLPGFINTLENVM 417
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+ Q+ ++ Y L +++D+ +K +VET+VDLD L+N E++I +D L +K
Sbjct: 418 DEQYQGPLETEYTTKLRNISDN--FSKLAEMVETTVDLDALDNHEFIIKPEFDDSLRIIK 475
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ + L+ + + HK DL+ DK L L+ G FR+T+ E IR K ++
Sbjct: 476 KKLDRLKHDMDTEHKIVGRDLNQDTDKKLFLENHRVHGWCFRLTRNEASCIRNK--REYQ 533
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
T+K+GV FT + + L ++ ++ Y Q LV V+ A ++ + + LA++L+
Sbjct: 534 ECSTQKNGVYFTTSTMLSLRREHDQLSSNYNRTQTGLVQEVVNVAASYCPLLEQLASVLA 593
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDV++SFA ++ PT Y RP I+P G+ +L+ +RHPC+E QD ++FI ND L+R
Sbjct: 594 HLDVIVSFAHVSVHAPTAYVRPKIHPRGTGNTVLKEARHPCMEMQDDISFITNDVSLLRN 653
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
+S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+
Sbjct: 654 ESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLK 713
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR LF
Sbjct: 714 GVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFALF 773
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHI------------DSTSRKLTMLYKV 822
ATHFHELTAL N V N HV A I D R++T+LY+V
Sbjct: 774 ATHFHELTALQERYPN--------SVKNLHVVAFINDGAEGKQHSSTDKKKREVTLLYRV 825
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
EPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT S +
Sbjct: 826 EPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSSTI 867
>gi|449496456|ref|XP_002195963.2| PREDICTED: DNA mismatch repair protein Msh2 [Taeniopygia guttata]
Length = 864
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/873 (42%), Positives = 559/873 (64%), Gaps = 48/873 (5%)
Query: 71 GSDALSSVSVSKNMFETIARDLLLERTDHTLELYE---GSGS----NWRLVKSGTPGNLG 123
G++ L SV +SK FE+ RDLLL R + +E+Y+ GS S +W L G+PGNL
Sbjct: 2 GTEKLESVVLSKMNFESFVRDLLLVR-HYRVEVYKNKAGSKSVKENDWYLAYKGSPGNLA 60
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+E+VLFANN+M +V + + + +G+GYVD T R L + EF D+ F+N+E+
Sbjct: 61 QFEEVLFANNDMSTAIGVVGVKLSAADGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEA 120
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
LV LG KEC+LP + E LR + R G+++T+RKK +F T+D+VQDL+RL++
Sbjct: 121 LLVQLGPKECVLPG-GETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKQK 179
Query: 244 VEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
E + + E +A +L A++ + ELLSDESN+G + + + L YM LD+AA++
Sbjct: 180 KEEQLNSAALPEMEKQVAVSSLSAVIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQ 239
Query: 300 ALNVLESKTD-ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
ALN+ +S + AN SL GL+N+ C G+RL++ W+KQPL+D I RL++V+AFV
Sbjct: 240 ALNLFQSSVENANTAQSLAGLLNK-CRTPQGQRLVNQWIKQPLMDKTRIEERLNLVEAFV 298
Query: 359 DDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
D LRQ L++ L +R D+ RL +++ A LQ +++Q+ +LP + AL+++EG
Sbjct: 299 MDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMFQAINQLPNVVQALEKHEGA 358
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
L+ ++ PL + D +KF+ ++ET++D++++EN E+++ +S+D L+ L+ +
Sbjct: 359 HQMLLLAVFITPLNDICSD--FSKFLEMIETTLDMEKVENHEFLVKASFDPNLTELREKM 416
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
LE ++ SL K A +L L K++KL+ +QFGH FR+T KEE +R +++ +++
Sbjct: 417 NELEEKMQSLLKTAAKELGLEAGKSIKLESNSQFGHHFRVTCKEEKALRN--NSKYGIID 474
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K+GVKFTN+KL + ++Y + EEY+ Q +V +I A ++E +++ ++++LD
Sbjct: 475 TQKNGVKFTNSKLSTINEEYIRNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLD 534
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
++SFA +++ P PY RP + G I+L+G+RHPC+E QD V FIPND +GK
Sbjct: 535 AIVSFAHVSNGAPVPYVRPVVLEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQM 594
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A I++ DCI ARVGAGD QL+GVS
Sbjct: 595 FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEITIVDCILARVGAGDSQLKGVS 654
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETASIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ +I +FATH
Sbjct: 655 TFMAEMLETASILRTATENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICGFAMFATH 714
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
FHELTALA Q+ V N HV+A ++ LTMLY+V+ G CDQSFGIHVAE
Sbjct: 715 FHELTALAD---------QVPTVNNLHVTAL--TSDDTLTMLYRVKEGVCDQSFGIHVAE 763
Query: 838 FANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP------NDMSRGAA 891
A FP+ V+ AREKA ELE+F +G ++ +P + G
Sbjct: 764 LAAFPKHVIESAREKALELEEFQ-----------NIGKSKESEGEPPVKKLYREREEGEK 812
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +PL M ++ ++K++++D+
Sbjct: 813 IIQDFLCQVKALPLTDMSEEDIKVKLKQLRNDV 845
>gi|315054281|ref|XP_003176515.1| DNA mismatch repair protein msh-2 [Arthroderma gypseum CBS 118893]
gi|311338361|gb|EFQ97563.1| DNA mismatch repair protein msh-2 [Arthroderma gypseum CBS 118893]
Length = 943
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/881 (43%), Positives = 540/881 (61%), Gaps = 38/881 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+++L + D VR FDR D+YTAHG +A +IA+T Y TT+ +R
Sbjct: 5 PELKVDDEV--GFIKFFRSLDSEDESTVRVFDRGDWYTAHGADAEYIARTVYKTTSVIRT 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE----GSGSNWRLVKSGTPGNLG 123
LG L+SV++S +F + R+ L R + ++++ SG W+L K +PGNL
Sbjct: 63 LGRSDSGLASVTLSVTVFRSFLREALF-RLNKRVQIWASQGGASGRGWKLAKQASPGNLQ 121
Query: 124 SYEDVL---FANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L N M P+I+A+ + +G+ + D + R LG++EF+D+ ++
Sbjct: 122 DVEEELGGASGGNAMDTAPIILAVKAATKAKEMRHVGVCFADASVRELGVSEFVDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES L+ LG KECL+ TE K E LR CGV +TER + F T+D+ QDL R
Sbjct: 182 NFESLLIQLGVKECLITTEGQKKDVELAKLRQIADSCGVAITERPVSAFGTKDIEQDLSR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ P + ++A G+ AL+SY +SD SN+G Y + K+ L YM+LD++A+
Sbjct: 242 LLKDETGPAMLPQTELKLAMGSASALISYLNAMSDPSNFGQYQLYKHDLAQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 RALNLMPGPRDGMKNMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHKDIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
DT LRQ +++ HL+ I D+ RL ++ +A L+ +V++YQ IR+P +I S +
Sbjct: 361 TDTELRQTMQEDHLRSIPDLYRLAKRFQRGKANLEDVVRIYQVVIRIPGFINSFEGVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ + + Y L L+ D L K +VET+VDLD L+N E++I +D L ++ +
Sbjct: 421 QYQTPLDAEYTTKLRKLSQD--LGKLTEMVETTVDLDALDNHEFIIKPEFDDSLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + S H++ DL +K L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRHDMDSEHRRVGRDLGQDTEKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSTMQALRREHDQLSMNYNRTQTGLVSEVVNVAASYCPLLEQLAGILAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA +++ PT Y RP I+P G+ IL+ +RHPC+E QD + FI ND LIR +S
Sbjct: 597 DVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKEARHPCMEMQDDITFITNDVSLIRDES 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GV
Sbjct: 657 SFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI+ +LFAT
Sbjct: 717 STFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIKCFSLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI----------DSTSRKLTMLYKVEPGA 826
HFHELTAL V+N HV A I +++T+LY+VEPG
Sbjct: 777 HFHELTALEERYPK--------AVSNLHVVAFIGDGPATDEKQQKKKQEVTLLYRVEPGV 828
Query: 827 CDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
CDQSFGIHVAE FP+ VV +AR+KA ELEDFT S D
Sbjct: 829 CDQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSSGANGD 869
>gi|13591999|ref|NP_112320.1| DNA mismatch repair protein Msh2 [Rattus norvegicus]
gi|1709122|sp|P54275.1|MSH2_RAT RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|1103621|emb|CAA63789.1| MSH2 protein [Rattus norvegicus]
Length = 933
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/933 (41%), Positives = 572/933 (61%), Gaps = 45/933 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L+ GF+ F++ +P + V FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLEGAAEVGFVRFFEGMPEKPSTTVGLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L +V +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLQTVVLSKMNFESFVKDLLLVR-HYRVEVYKNKAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + I+ + + + +G+G VD T+R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMATSIGIMGIKLSTVDGQRQVGVGDVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECILPG-GETAGDMGKLRQVIQRGGILITERKRIDFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GRKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL +N+ C G+RL+ W+KQPL+D N I RL+
Sbjct: 303 DMAAVRALNLFQGSVEDTTGSQSLAAFLNK-CKTAQGQRLVSQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D+ LR+ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDSELRRALQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVKQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++Y+G+ +L+ ++ PL L D +KF +ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKYQGRHQALLLAVFVTPLTDLRSD--FSKFQEKIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + LE+++ S A L L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E +++
Sbjct: 538 NFSTVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTVND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LD ++SFA ++++ P PY RP I G II++ SRH CVE Q V FIPND
Sbjct: 598 VLAHLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIIVKASRHACVEVQHDVAFIPNDVHF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATNIGAF 777
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 778 CMFATHFHELTALA---------SQIPTVNNLHVTAL--TTEETLTMLYQVKTGVCDQSF 826
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP V+ A++KA ELE+F + + +KR+ + + +G
Sbjct: 827 GIHVAELANFPRHVIECAKQKALELEEFQSIGTSQGHDETQPAAKRRCL----EREQGEK 882
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P + + ++K++K ++
Sbjct: 883 IILEFLSKVKQVPFTDLSEESVSVKLKQLKAEV 915
>gi|328766455|gb|EGF76509.1| hypothetical protein BATDEDRAFT_21067 [Batrachochytrium
dendrobatidis JAM81]
Length = 923
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/909 (41%), Positives = 565/909 (62%), Gaps = 50/909 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTRAVRFFDRR--DYYTAHGENATFIAKTYYHTTTALR 66
P++ LD F F+++L +R F+R DYY+ HG +A F+++ Y T T L+
Sbjct: 8 PDMALDKSSETSFCRFFESLVQTQGTLRLFERNGGDYYSVHGIDAVFVSEHVYRTATVLK 67
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSGSNWRLVKSGTPGNLG 123
QLG+G L S ++SK + ++LL E+ + +E++ G ++W++ K +PGNL
Sbjct: 68 QLGSG---LQSCTLSKLNAMSFLKELLTEK-QYRIEIWCPDSGKNNSWKISKQASPGNLQ 123
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTK-RVLGLAEFLDDSHFTNVE 182
S ED+LF N ++ PV++A+ + + +G+GY D T R LG+ EF+D+ FTN E
Sbjct: 124 SVEDMLFVNTDVGSAPVVLAVTVTVKGSDKIVGVGYTDATTMRRLGICEFVDNETFTNFE 183
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
S ++ LG KE ++P ++ ++ + K ++ + RC ++TER+K+EF +++ QDL RL+
Sbjct: 184 SIMIQLGVKEVVMPDDS-QNYDLKKIKAIVLRCDAIITERRKSEFNIQNIQQDLSRLLES 242
Query: 243 ----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
S P +L + + AL+ Y +LL+DESN+G Y I ++ L YMRLD+AA+
Sbjct: 243 DIFVSALPEMELTTAMR----CIAALIHYLDLLADESNFGKYTIEQHDLSQYMRLDAAAV 298
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
+ALN++ + K+ S+FGL+++ C G RLL W+KQPL+++++I R ++VQ F
Sbjct: 299 KALNLVPNGQSGPKSASIFGLLDQ-CKTAQGSRLLGQWIKQPLMNISDIVNRQNLVQVFF 357
Query: 359 DDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
DD+ LRQ L+ + LK D+ RL ++ A LQ +V++YQ + LP + L+ Y G+
Sbjct: 358 DDSQLRQALQDERLKTFPDLHRLARKFQRGSASLQDVVRVYQVVLGLPAMVETLEDYSGK 417
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
+ L E + + ++ L K LVET++DL +EN +Y+I + L ++
Sbjct: 418 YMDLFSETFTLKFKEYSES--LCKLQELVETTIDLAAVENHQYLIKPDFHRELLETRSSM 475
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
+++ I S +Q A DL + +K LK +K +Q+G+ R+++ + +IR +I L
Sbjct: 476 DNVLNTIQSEAEQVAIDLGIEFEKRLKFEKNSQYGYHLRLSRVDANRIRGN--RDYIELS 533
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K GV FT L+ L + + ++ + Y+ Q+ L VI ++ + + L +++ +D
Sbjct: 534 TQKAGVLFTTVNLRTLSNNFAELTKAYELLQQNLSKDVISITGSYFPVLELLNQLVAHID 593
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
VL+SFAD+A S P Y RP+I GDIIL+ +RHPCVE QD V+FI ND L+R S
Sbjct: 594 VLVSFADVAISAPMQYVRPNILLSGQGDIILKKARHPCVEVQDDVSFIENDVDLVRNDSV 653
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
FQIITGPNMGGKST+IRQ+GV +LMAQ+GSFVPC+ AS+S+ D I ARVGA D QL+G+S
Sbjct: 654 FQIITGPNMGGKSTYIRQIGVIVLMAQIGSFVPCEEASVSIVDSILARVGANDSQLKGIS 713
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI EH+ + I TLFATH
Sbjct: 714 TFMAEMLETASILRAATSNSLIIIDELGRGTSTYDGFGLAWAIAEHIAKHIGCFTLFATH 773
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS---RKLTMLYKVEPGACDQSFGIH 834
FHEL+ LA Q+ V N HVSA + + S + LT+LYKV PG CDQSFGIH
Sbjct: 774 FHELSNLA---------DQVPFVKNLHVSALLSTLSSGPKSLTLLYKVMPGVCDQSFGIH 824
Query: 835 VAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPND--MSRGAAR 892
VAE A FP+SVV +A+ KAAELEDF+ + KR+ + +D + G+
Sbjct: 825 VAELAAFPDSVVKIAKRKAAELEDFSHH-----------DEQPKRVWNSSDEAIQSGSEL 873
Query: 893 AHQFLKEFS 901
A QFL E S
Sbjct: 874 AQQFLSEAS 882
>gi|440906160|gb|ELR56461.1| DNA mismatch repair protein Msh2 [Bos grunniens mutus]
Length = 934
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/929 (41%), Positives = 573/929 (61%), Gaps = 37/929 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+LD+ GF+ F++ +P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLDSAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKFSYCG 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
++ N ++ + +V + + + +G+GYVD T+R LGL EF D+ F+N+
Sbjct: 128 PSVAPEMPHVNRQLSASIGVVGVKMSTVDGQRQVGVGYVDSTQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC++P + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVMPG-GETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E V V ++A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQVNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ+L++ L +R D+ RL +++ A LQ +LYQ +LP + AL++YE
Sbjct: 366 FVEDAELRQNLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQALFLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S A DL L K +KLD TQFG+ FR+T KEE +R F
Sbjct: 484 IMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L +L++
Sbjct: 542 VDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA ++ + P PY RP I G I L+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAVVSFAHVSDAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+G
Sbjct: 662 QMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLKG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
VSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +IRA +FA
Sbjct: 722 VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIRAFCMFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHV
Sbjct: 782 THFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHV 830
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
AE ANFP V+ A++KA ELE+F + ++E +KR + + +G +
Sbjct: 831 AELANFPRHVIECAKQKALELEEFQNIGKPQECDEMEPAAKRCYL----EREQGEKIIQE 886
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P M + ++K++K ++
Sbjct: 887 FLSKVKQVPFTEMSEESITRKLKQLKAEV 915
>gi|240280777|gb|EER44281.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
gi|325088962|gb|EGC42272.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 941
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/882 (43%), Positives = 551/882 (62%), Gaps = 47/882 (5%)
Query: 10 ELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
ELK+D + GF+ F+++LP +D+ +R FDR D++TAHG +A +IA+T Y TT+ L+
Sbjct: 6 ELKVDDEG--GFIRFFRSLPAKDDSSTIRIFDRGDFFTAHGPDAEYIARTVYKTTSVLKS 63
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY--EGSG-SNWRLVKSGTPGNLG 123
LG + S L SV+++ +F R+ L R + +E++ +G G +NW+L K +PGNL
Sbjct: 64 LGRSDSSGLPSVTMTTTVFRNFLRESLF-RLNMRVEIWVSQGGGKTNWKLAKQASPGNLQ 122
Query: 124 SYEDVLFANNEMQDT-PVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L A+ D+ P+I+A+ + + + +G+ + D + R LG++EF+D+ ++N
Sbjct: 123 DVEEELGASGPAMDSAPIILAVKISAKASEARQVGVCFADASVRELGVSEFVDNDLYSNF 182
Query: 182 ESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
ES ++ LG KECL+ E+ K E LR L CG+ +++R +F T+D+ QDL RL+
Sbjct: 183 ESLVIQLGVKECLIMMESQKKDVELGKLRSILDNCGIAISQRPMADFGTKDIEQDLSRLL 242
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
R + P DL ++A GA AL+ Y +SD +N+G Y + ++ L YM+LD+A
Sbjct: 243 RDERVAGILPQTDL----KLAMGAAAALIKYLGAMSDATNFGQYRLYQHDLSQYMKLDAA 298
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A+RALN++ D KN SL+GL+N C +G RLL WLKQPL++ +I R +V+A
Sbjct: 299 ALRALNLMPGPRDGAKNMSLYGLLNH-CKTPVGSRLLAQWLKQPLMNHEDIEKRQQLVEA 357
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQY 414
FV DT LRQ +++ HL+ I D+ RL ++ A L+ +V++YQ IRLP +I +
Sbjct: 358 FVVDTELRQTMQEDHLRSIPDLYRLAKRFQRDMANLEDVVRVYQVVIRLPGFINTLENVM 417
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+ Q+ ++ Y L +++D+ +K +VET+VDLD L+N E++I +D L +K
Sbjct: 418 DEQYQGPLETEYTTKLRNISDN--FSKLAEMVETTVDLDALDNHEFIIKPEFDDSLRIIK 475
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ + L+ + + HK DL+ DK L L+ G FR+T+ E IR K ++
Sbjct: 476 KKLDRLKHDMDTEHKIVGRDLNQDTDKKLLLENHRVHGWCFRLTRNEASCIRNK--REYQ 533
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
T+K+GV FT + + L ++ ++ Y Q LV V+ A ++ + + LA++L+
Sbjct: 534 ECSTQKNGVYFTTSTMLSLRREHDQLSSNYNRTQTGLVQEVVNVAASYCPLLEQLASVLA 593
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDV++SFA ++ PT Y RP I+P G+ +L+ +RHPC+E QD ++FI ND L+R
Sbjct: 594 HLDVIVSFAHVSVHAPTAYVRPKIHPRGTGNTVLKEARHPCMEMQDDISFITNDVSLLRN 653
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
+S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+
Sbjct: 654 ESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLK 713
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR LF
Sbjct: 714 GVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFALF 773
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHI------------DSTSRKLTMLYKV 822
ATHFHELTAL N V N HV A I D R++T+LY+V
Sbjct: 774 ATHFHELTALQERYPN--------SVKNLHVVAFINDGPEGKQHSSTDKKKREVTLLYRV 825
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
EPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT S +
Sbjct: 826 EPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSSTI 867
>gi|296815192|ref|XP_002847933.1| DNA mismatch repair protein msh-2 [Arthroderma otae CBS 113480]
gi|238840958|gb|EEQ30620.1| DNA mismatch repair protein msh-2 [Arthroderma otae CBS 113480]
Length = 942
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/879 (43%), Positives = 540/879 (61%), Gaps = 40/879 (4%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+++L P D VR FDR D+YTAHG +A +IA+T Y TT+ +R
Sbjct: 5 PELKVDDEV--GFIRFFRSLDPEDDATVRVFDRGDWYTAHGADAEYIARTVYKTTSVIRT 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE----GSGSNWRLVKSGTPGNLG 123
LG L SV++S +F + R+ L R + ++++ SG W+L K +PGNL
Sbjct: 63 LGRSDSGLPSVTLSVTVFRSFLREALF-RLNKRVQIWSSQGGASGRGWKLSKQASPGNLQ 121
Query: 124 SYEDVL---FANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L N M P+I+A+ + +G+ + D + R LG++EF+D+ ++
Sbjct: 122 DVEEELGGASGGNAMDTAPIILAVKVVAKAKEMRHVGVCFADASVRELGVSEFVDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES L+ LG KECL+P E K E LR CGV +T+R ++F T+D+ QDL R
Sbjct: 182 NFESLLIQLGVKECLIPAEGQKKDVELSKLRQIADSCGVAITQRPVSDFGTKDIEQDLSR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ P + ++A G+ AL+ Y +SD SN+G Y + K+ L YM+LD++A+
Sbjct: 242 LLKDETGPAMLPQTDLKLAMGSAAALIGYLNAMSDPSNFGQYQLYKHDLAQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D K+ SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 RALNLMPGPRDGVKSMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHTDIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
DT LRQ +++ HL+ I D+ RL ++ A L+ +V++YQ IR+P +I S +
Sbjct: 361 TDTELRQTMQEDHLRAIPDLFRLAKRFQRGLANLEDVVRVYQVVIRIPGFINSFEGVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
++ + + Y L L++D L K +VET+VDL+ L+N E++I +D L ++ +
Sbjct: 421 KYQAPLDAEYTTKLRKLSND--LGKLAEMVETTVDLEALDNHEFIIKPEFDDSLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + S H++ DL +K L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRNDMDSEHRRVGRDLGQDTEKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ Y Q LVN V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSTMQSLRREHDQLSMNYNRTQSGLVNEVVNVAASYCPLLEQLAGILAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA +++ PT Y RP I+P G+ IL+ +RHPC+E QD + FI ND LIR KS
Sbjct: 597 DVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKEARHPCMEMQDDITFITNDVSLIRDKS 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D QL+GV
Sbjct: 657 SFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDCILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH++ EI+ +LFAT
Sbjct: 717 STFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIKCFSLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI------------DSTSRKLTMLYKVEP 824
HFHELTAL V+N HV A I +++T+LY+VEP
Sbjct: 777 HFHELTALEERYPK--------SVSNLHVVAFIGDGPASGDKKPEKGKKQEVTLLYRVEP 828
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
G CDQSFGIHVAE FP+ VV +AR+KA ELEDFT S+
Sbjct: 829 GVCDQSFGIHVAELVRFPDKVVNMARQKAEELEDFTTSS 867
>gi|358368332|dbj|GAA84949.1| DNA mismatch repair protein Msh2 [Aspergillus kawachii IFO 4308]
Length = 944
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/887 (43%), Positives = 553/887 (62%), Gaps = 53/887 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDT------RAVRFFDRRDYYTAHGENATFIAKTYYHTT 62
P+LK+D + GF+ FY+++ + + +R FDR D+Y+AHG A FIA+T Y TT
Sbjct: 5 PDLKVDDEV--GFIRFYRSISSSSDNDNNNETIRVFDRGDWYSAHGAEAEFIARTVYKTT 62
Query: 63 TALRQLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSGSNWRLVKSGT 118
+ +R LG + + L SV++S +F R+ L R + +E++ G G W+L+K +
Sbjct: 63 SVIRNLGRSDTGGLPSVTMSVTVFRNFLREALF-RLNRRVEIWGSASGRGGQWKLIKQAS 121
Query: 119 PGNLGSYEDVLFANNEMQ---DTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLD 174
PGNL E+ L + + P+I+A+ + + ++G+ + D + R LG++EFLD
Sbjct: 122 PGNLQDVEEELGSVGGLNIEAGAPIILAVKISAKAGEARSVGVCFADASVRELGVSEFLD 181
Query: 175 DSHFTNVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
+ ++N+ES ++ LG KECL+ +A K E +R+ + CG+ ++ER+ +F RD+
Sbjct: 182 NDVYSNLESLVIQLGVKECLVQMDAGRKDVELGKVRNIMDSCGIAVSERQSGDFGVRDIE 241
Query: 234 QDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
QDL RL+R + ++A G+ AL+ Y +++D SN+G Y + ++ L +M+L
Sbjct: 242 QDLTRLLRDERSAGTLPQTELKLAMGSAAALIKYLGVMTDPSNFGQYRLYQHDLSQFMKL 301
Query: 294 DSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
DS+A+RALN++ D +K+ SLFGL+N C +G RLL WLKQPL+D +EI R +
Sbjct: 302 DSSALRALNLMPGPRDGSKSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDKDEIEKRQQL 360
Query: 354 VQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V++FV DT LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++L+
Sbjct: 361 VESFVMDTELRQTMQEEHLRSIPDLYRLAKRFQRKQATLEDVVRVYQVAIRLPGFVASLE 420
Query: 413 QYEGQFSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSSY 466
+++ E+Y PLE+ + D+L K +VET+VDLD LEN E++I +
Sbjct: 421 -------NVMDEQYQTPLEAEYTSKLRSHSDNLAKLEEMVETTVDLDALENHEFIIKPEF 473
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
D L ++ + + L + S H++ DLD VDK L L+ G FR+T+ E IR
Sbjct: 474 DESLRIIRKKLDKLRHDMDSEHRRVGRDLDQEVDKKLFLENHRVHGWCFRLTRNEAGCIR 533
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K ++ T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ +
Sbjct: 534 NK--REYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNRTQTGLVSEVVGVAASYCPVL 591
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIP 646
+ LA +L+ LDV++SFA A PTPY RP I+P G+ IL+ +RHPC+E QD ++FI
Sbjct: 592 EQLAGVLAHLDVIVSFAHCAVHAPTPYVRPRIHPRGTGNTILKEARHPCMEMQDDISFIT 651
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND LIR +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARV
Sbjct: 652 NDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDCILARV 711
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GA D QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V
Sbjct: 712 GASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVT 771
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI----------DSTSRKL 816
EIR LFATHFHELTALA N HV A I DS ++
Sbjct: 772 EIRCFGLFATHFHELTALADRYPK--------SAKNLHVVAFIGDGTGDEESKDSKRDQV 823
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
T+LY+VEPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT S
Sbjct: 824 TLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKADELEDFTSSG 870
>gi|154278353|ref|XP_001539990.1| DNA mismatch repair protein msh-2 [Ajellomyces capsulatus NAm1]
gi|150413575|gb|EDN08958.1| DNA mismatch repair protein msh-2 [Ajellomyces capsulatus NAm1]
Length = 1015
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/874 (43%), Positives = 550/874 (62%), Gaps = 31/874 (3%)
Query: 10 ELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
ELK+D + GF+ F+++LP +D+ +R FDR D++TAHG +A +IA+T Y TT+ L+
Sbjct: 80 ELKVDDEG--GFIRFFRSLPAKDDSSTIRIFDRGDFFTAHGPDAEYIARTVYKTTSVLKS 137
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY--EGSG-SNWRLVKSGTPGNLG 123
LG + S L SV+++ +F R+ L R + +E++ +G G +NW+L K +PGNL
Sbjct: 138 LGRSDSSGLPSVTMTTTVFRNFLRESLF-RLNMRVEIWVSQGGGKTNWKLAKQASPGNLQ 196
Query: 124 SYEDVLFANNEMQDT-PVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L A+ D+ P+I+A+ + + + +G+ + D + R LG+ EF+D+ ++N
Sbjct: 197 DVEEELGASGPAMDSAPIILAVKISAKASEARQVGVCFADASVRELGVGEFVDNDLYSNF 256
Query: 182 ESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
ES ++ LG KECL+ E+ K E LR L CG+ +++R +F T+D+ QDL RL+
Sbjct: 257 ESLVIQLGVKECLIMMESQKKDVELGKLRSILDNCGIAISQRPMADFGTKDIEQDLSRLL 316
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
R + P DL ++A GA AL+ Y +SD +N+G Y + ++ L YM+LD+A
Sbjct: 317 RDERVAGILPQTDL----KLAMGAAAALIKYLGAMSDATNFGQYRLYQHDLSQYMKLDAA 372
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A+RALN++ D KN SL+GL+N C +G RLL WLKQPL++ +I R +V+A
Sbjct: 373 ALRALNLMPGPRDGAKNMSLYGLLNH-CKTPVGSRLLAQWLKQPLMNHEDIEKRQQLVEA 431
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQY 414
FV DT LRQ +++ HL+ I D+ RL ++ A L+ +V++YQ IRLP +I +
Sbjct: 432 FVVDTELRQTMQEDHLRSIPDLYRLAKRFQRDMANLEDVVRVYQVVIRLPGFINTLENVM 491
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+ Q+ ++ Y L +++D+ +K +VET+VDLD L+N E++I +D L +K
Sbjct: 492 DEQYQGPLETEYTTKLRNISDN--FSKLAEMVETTVDLDALDNHEFIIKPEFDDSLRIIK 549
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ + L+ + + HK DL+ DK L L+ G FR+T+ E IR K ++
Sbjct: 550 KKLDRLKHDMDTEHKIVGRDLNQDTDKKLFLENHRVHGWCFRLTRNEASCIRNK--REYQ 607
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
T+K+GV FT + + L ++ ++ Y Q LV V+ A ++ + + LA++L+
Sbjct: 608 ECSTQKNGVYFTTSTMLSLRREHDQLSSNYNRTQTGLVQEVVNVAASYCPLLEQLASVLA 667
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDV++SFA ++ PT Y RP I+P G+ +L+ +RHPC+E QD ++FI ND L+R
Sbjct: 668 HLDVIVSFAHVSVHAPTAYVRPKIHPRGTGNTVLKEARHPCMEMQDDISFITNDVSLLRN 727
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
+S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+
Sbjct: 728 ESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLK 787
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR LF
Sbjct: 788 GVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFALF 847
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS----RKLTMLYKVEPGACDQS 830
ATHFHELTAL N +V N +S++ R++T+LY+VEPG CDQS
Sbjct: 848 ATHFHELTALQDRYPNSVKNLHVVAFINDGTEGKQNSSTDKKKREVTLLYRVEPGVCDQS 907
Query: 831 FGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
FGIHVAE FPE VV +AR+KA ELEDFT S +
Sbjct: 908 FGIHVAELVRFPEKVVNMARQKAEELEDFTSSTI 941
>gi|440638319|gb|ELR08238.1| hypothetical protein GMDG_03040 [Geomyces destructans 20631-21]
Length = 1765
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/896 (42%), Positives = 559/896 (62%), Gaps = 39/896 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D +Q GF+ F+K+LP D+ +R F+R DYYTAHGE+A+FIA+T Y TT+ LRQ
Sbjct: 849 PELKVDDEQ--GFIKFFKSLPTEDSETIRIFNRGDYYTAHGEDASFIARTVYKTTSVLRQ 906
Query: 68 LGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS-NWRLVKSGTPGNLGSY 125
LG L SV+++ +F R+ L R +E++E +G W++ K +PGNL
Sbjct: 907 LGRNDHTGLPSVTMTVTVFRNFLREALF-RLGKRIEVWESTGRMQWKVGKQASPGNLQDI 965
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
ED L ++ P+++A+ + + + +G+ + D + R LG++EFLD+ ++N+ES
Sbjct: 966 EDEL--GGQIDAAPIMLAVKVSAKASETRNVGVCFADASVRELGVSEFLDNDLYSNLESL 1023
Query: 185 LVALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
L+ LG KECL+ + + K E L+ + CG+ ++ER T+F T+D+ QDL R++R
Sbjct: 1024 LIQLGVKECLIQVDKSNKDIEISKLKAIIDSCGIAVSERPITDFGTKDIEQDLARILRDE 1083
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
+ ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LDS A++ALN+
Sbjct: 1084 AASGALPQTDLKLAMGSAAALIKYLGILHDPSNFGQYQLYQHDLAQFMKLDSPALKALNL 1143
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
+ D +K SLFGL+N C +G RLL WLKQPL+ +EI R +V++FV+DT L
Sbjct: 1144 MPGPRDGSKTMSLFGLLNH-CKTAVGTRLLAQWLKQPLMSKDEIEKRQMLVESFVEDTEL 1202
Query: 364 RQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEGQFSSL 421
RQ +++ HL+ I D+ RL +K+ A L+ +V+ YQ IRLP +I + + ++ +
Sbjct: 1203 RQTMQEEHLRSIPDLYRLAKRFQKKMANLEDVVRAYQVVIRLPGFIGTLEGVMDDKYKDI 1262
Query: 422 IKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLE 481
+ + Y + ++ L++ +VET+VDLD ++ E++I +D L ++ + L+
Sbjct: 1263 LDDAYTVKIREYSES--LSRLQEMVETTVDLDAMDRHEFIIKPEFDDSLRIIRKNLDKLK 1320
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
+ + + DLD +DK L L+ G R+T+ E IR K +++ T+K+
Sbjct: 1321 YDMEKESQSVSDDLDQELDKKLFLENHRTHGWCLRLTRTEAACIRNK--KRYLECSTQKN 1378
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
GV FT L+ + ++ ++ E Y Q LVN V+ A ++ + + LA +L+ LDV++S
Sbjct: 1379 GVYFTTNALQSMRREHDQLSENYNRTQSSLVNEVVSVATSYCPVIELLAGVLAHLDVIVS 1438
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQII 661
FA ++ PT YT+P ++ GD IL+ +RHPC+E QD + FI ND LIR KS F II
Sbjct: 1439 FAHVSVHAPTAYTKPKMHERGTGDTILKEARHPCMEMQDDIQFITNDVSLIRKKSEFLII 1498
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKST+IRQVGV LMAQ+G FVPC A +++ DCI ARVGA D QL+GVSTFM
Sbjct: 1499 TGPNMGGKSTYIRQVGVIALMAQIGCFVPCTTAELTIFDCILARVGASDSQLKGVSTFMA 1558
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI A ++FATHFHEL
Sbjct: 1559 EMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIAAFSMFATHFHEL 1618
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHI--------DSTSRKLTMLYKVEPGACDQSFGI 833
TALA E V+N HV AHI R++T+LYKVE G CDQSFGI
Sbjct: 1619 TALADEFPQ---------VSNLHVVAHIGDGPQSDGKGDKREVTLLYKVEDGVCDQSFGI 1669
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG 889
HVA+ FPE VV +A+ KA ELEDFT +DA V KR+ + D + M +G
Sbjct: 1670 HVAKLVRFPEKVVNMAKRKADELEDFTGKH--ENDA---VKVKREDVEDGSVMLKG 1720
>gi|407928260|gb|EKG21122.1| hypothetical protein MPH_01541 [Macrophomina phaseolina MS6]
Length = 933
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/887 (44%), Positives = 552/887 (62%), Gaps = 67/887 (7%)
Query: 9 PELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK++ + GF+ F++ L P+DT VR FDR D+YTAHG++A FIA+T Y TT+ L
Sbjct: 5 PELKVEDEP--GFIRFFRNLATKPDDT--VRIFDRGDFYTAHGDDAVFIARTVYRTTSVL 60
Query: 66 RQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG-SNWRLVKSGTPGNLGS 124
RQLG L SV++S +F R+ L R +E++E +G SNW++ K +PGNL
Sbjct: 61 RQLGR-EPGLESVTLSITVFRNFLREALF-RLGKRIEIWESTGRSNWKVSKQASPGNLQD 118
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
E+ L ++ P+I+A+ + + +G+ + D + R LG++EFLD+ ++N ES
Sbjct: 119 VEEDL--GGQLDSAPIILAVKITAKASEARHVGVCFADASVRELGVSEFLDNDLYSNFES 176
Query: 184 ALVALGCKECLLPTEAV-KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR- 241
L+ LG KECLL ++ K +E LR CG ++ER T+F T+D+ QDL RL+R
Sbjct: 177 LLIQLGAKECLLQADSSRKDAELAKLRTIADNCGCAVSERGSTDFGTKDIDQDLSRLLRD 236
Query: 242 ----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G++ P DL ++A GA AL+ Y ++SD++N+G Y + ++ L +M+LD+AA
Sbjct: 237 ERAVGTL-PQTDL----KLAMGAAAALIRYLGVMSDQTNFGQYQLYQHDLSQFMKLDAAA 291
Query: 298 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
++ALN++ D +K SL+GL+N C +G RLL WLKQPL+DV EI R +V+AF
Sbjct: 292 LKALNLMPGPRDGSKTMSLYGLLNH-CKTPLGSRLLAQWLKQPLMDVREIERRQQLVEAF 350
Query: 358 VDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
V DT LRQ +++ HL+ I D+ RL +++ A L+ +V+ YQ +IRLP + G
Sbjct: 351 VMDTELRQTMQEEHLRSIPDLYRLAKKFQRKMANLEDVVRAYQVAIRLP-------GFLG 403
Query: 417 QFSSLIKERYLDPLES-----LTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
++ E+Y DPL+S L + + L K +VET+VDL+ L+N E++I +D L
Sbjct: 404 TLEGVMDEQYKDPLDSEYTSKLNECSNSLAKLQEMVETTVDLEALDNHEFIIKPEFDDDL 463
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
+ E L + + H + ++DLD +DK L ++ G FR+T+ E IR K
Sbjct: 464 RNISRRLEKLRKSMQIEHTRVSNDLDQDIDKKLFMENHKVHGWCFRLTRNEAGCIRNK-- 521
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
Q+ T+K+GV FT L +L ++ ++ E Y Q+ LVN V+ A ++ + + LA
Sbjct: 522 KQYTECSTQKNGVYFTTENLAELRREFDQLSENYNRTQRGLVNEVVNVAASYCPVIEKLA 581
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L+ LDV++SFA ++ PT Y RP ++ G+ IL+ +RHPC+E QD ++FI ND
Sbjct: 582 GILAHLDVIVSFAHVSVHAPTAYVRPKMHDRGTGNTILKEARHPCMEMQDDISFITNDVS 641
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L+RG+S F IITGPNMGGKST+IRQ+GV L+AQVG FVPC A + + D I ARVGA D
Sbjct: 642 LVRGQSEFLIITGPNMGGKSTYIRQIGVIALLAQVGCFVPCSEAELCIFDSILARVGASD 701
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
L+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI A
Sbjct: 702 STLKGVSTFMAEMLETANILKSATRESLIIIDELGRGTSTYDGFGLAWAISEHIVREIGA 761
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-----DST------------S 813
FATHFHELTAL V N HV AHI D+T
Sbjct: 762 FAAFATHFHELTALVDTYPQ---------VQNLHVVAHIGEGQQDTTMGDGDEDAPPEKR 812
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
R++T+LYKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDF+
Sbjct: 813 REVTLLYKVEPGVCDQSFGIHVAELVRFPQKVVNMAKRKADELEDFS 859
>gi|429857861|gb|ELA32701.1| DNA mismatch repair protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 923
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/880 (43%), Positives = 548/880 (62%), Gaps = 58/880 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK+D + GF+ F+K+LP DT VR FDR D+YTAHGE+A FIA+T Y TT+ +
Sbjct: 5 PELKVDDEH--GFIRFFKSLPTVHEDT--VRIFDRGDWYTAHGEDANFIARTVYKTTSVV 60
Query: 66 RQLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNL 122
R LG L+SV+++ +F R+ L + +E++E +G NW++VK +PGNL
Sbjct: 61 RTLGRDDKTGLASVTMTVTVFRQFLREALF-KLGKRIEIWESTGGRMNWKVVKQASPGNL 119
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L ++++ P+I+A+ + + + ++G+ + D + R LG++EFLD+ F+N
Sbjct: 120 QDVEEDL--GGQIENAPMILAVKISTKASEARSVGVCFADASVRELGVSEFLDNDLFSNF 177
Query: 182 ESALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
E+ L+ LG +ECL+ T+ K + L+ + CGV ++ER EF T+D+ QDL R
Sbjct: 178 EALLIQLGVRECLIQTDKADKAKDPDLTKLKQIIVNCGVAISERSGGEFGTKDIEQDLAR 237
Query: 239 LVRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L++ ++ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L YM+LD
Sbjct: 238 LLKDERATTLLPQTDL----KLAMGSAAALIKYLGVLHDPSNFGQYQLYQHDLSQYMKLD 293
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
+AA++ALN++ D K SL+GL+N C +G RLL WLKQPL+ EI R +V
Sbjct: 294 AAALKALNLMPGARDGAKTMSLYGLLNH-CKTPVGSRLLSQWLKQPLMSKEEITKRQQLV 352
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+AFV+DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP
Sbjct: 353 EAFVNDTELRQTMQEEHLRSVPDLYRLAKRFQRGKANLEDVVRAYQVVIRLP-------G 405
Query: 414 YEGQFSSLIKERYLDPLESLTD------DDHLNKFIALVETSVDLDQLENGEYMISSSYD 467
+ G F ++ E+Y DPL+ D L K +VET+VDLD L+N EY+I +D
Sbjct: 406 FLGTFEGVMDEQYKDPLDEAYTIPLRELSDSLVKLAEMVETTVDLDALDNHEYIIKPEFD 465
Query: 468 TGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRK 527
L ++ + + L+R I +A DL V K + L+ G+ R+T++E IR
Sbjct: 466 DSLRIIRKKLDKLKRDIDQEFSDSARDLKQEVGKKIFLENHKVHGYCMRLTRQEAGAIRN 525
Query: 528 KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFK 587
K + + T+K+GV FT L+ L ++ ++ + Y Q LVN V+ A ++ + +
Sbjct: 526 K--SGYQECSTQKNGVYFTTKTLQSLRREFDQLSQNYNRTQSSLVNEVVGVAASYCPVLE 583
Query: 588 SLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPN 647
LA +L+ LDV++SFA + P+ Y RP I+ G IL+ +RHPC+E QD V FI N
Sbjct: 584 KLAGVLANLDVIVSFAHCSVHAPSEYVRPTIHARGQGQTILKEARHPCLEMQDDVQFITN 643
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
D L R KS F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVG
Sbjct: 644 DVSLTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDSILARVG 703
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
A D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+E
Sbjct: 704 ASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKE 763
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-------DSTSRKLTMLY 820
I +FATHFHELTALA E+ V N HV+AHI ++T R++T+LY
Sbjct: 764 IGCFAMFATHFHELTALADEHPE---------VHNLHVAAHISGGNEGGENTKREVTLLY 814
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
KVE G CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 815 KVEDGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 854
>gi|396474309|ref|XP_003839541.1| similar to DNA mismatch repair protein msh-2 [Leptosphaeria
maculans JN3]
gi|312216110|emb|CBX96062.1| similar to DNA mismatch repair protein msh-2 [Leptosphaeria
maculans JN3]
Length = 922
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/873 (43%), Positives = 542/873 (62%), Gaps = 47/873 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PE++ + GF F++ LP DT +R FDR DYY+AHG +A FIA T Y TT +R+
Sbjct: 5 PEMR--EEDESGFCKFFRNLPEKDTDTIRIFDRGDYYSAHGGDAVFIANTVYKTTAVIRR 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGSY 125
LG L SV+++ +F + RD L R +E+++ S +W +VK +PGNL
Sbjct: 63 LGR-EPGLESVTMTVTVFRSFLRDALF-RLSKRIEIWQSSAKRMDWIMVKQASPGNLQDL 120
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
ED L ++++ P+I+A+ + + + +G+ + D + R LG+ EFLD+ ++N ES
Sbjct: 121 EDDL--GGQIENAPIILAVKVSTKTSEARNVGICFADASVRELGVTEFLDNDLYSNFESL 178
Query: 185 LVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
L+ LG KECL+ + K E LR CG + ER +F T+D+ QDL RL++
Sbjct: 179 LIQLGVKECLIQIDTSKKDVELSKLRTIADNCGCAVAERSPADFGTKDIEQDLPRLLKDE 238
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
+ ++A GA L+ Y ++SD SN+G Y + ++ L YM+LD+AA++ALN+
Sbjct: 239 RAVTTLPSTDLKLAMGAAACLIKYLGVMSDSSNFGQYQLYQHDLTQYMKLDAAALKALNL 298
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
+ D KN SL+GL+N C G RLL WLKQPL++V +I R +V+AFV+DT L
Sbjct: 299 MPGPRDGAKNMSLYGLLNH-CKTPTGSRLLSQWLKQPLMNVKDIERRQQLVEAFVEDTEL 357
Query: 364 RQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
RQ +++ HL+ I D+ RL +++ A L+ +V+ YQ IRLP S+L+ +++
Sbjct: 358 RQTMQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSSLE-------AVM 410
Query: 423 KERYLDPLESLTDD---DHLNKFIAL---VETSVDLDQLENGEYMISSSYDTGLSALKNE 476
E+Y +PL++ D + N F L VET+VDL+ L+N E++I YD L ++
Sbjct: 411 DEKYKEPLDAEYIDKLRQYANAFAGLQNMVETTVDLEALDNHEFIIKPEYDEALKTIRKR 470
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L+R + S H +DLD +K L L+ Q G FR+T+ E IR+K Q+ +
Sbjct: 471 LDRLKRDMESEHMNVGNDLDQDTEKKLFLENHKQHGWCFRLTRNEAGCIRQK--KQYKEI 528
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT ++L++ ++ ++ + Y Q LVN V+ A ++ + + LA +L+ L
Sbjct: 529 STQKNGVYFTTSRLQEKRREFDQLSDTYNRTQTGLVNEVVSVASSYVPVLEKLAAVLAHL 588
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA ++ PT YTRP ++P G+ IL+ +RHPC+E QD V+FI ND L+R +S
Sbjct: 589 DVIVSFAHVSVHAPTSYTRPRMHPRGTGNTILKEARHPCLEMQDDVSFITNDVALVRDES 648
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D Q++GV
Sbjct: 649 EFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQIKGV 708
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++V+EI A LFAT
Sbjct: 709 STFMAEMLETANILKSATRESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAFALFAT 768
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS----------RKLTMLYKVEPGA 826
HFHELTAL V N HV AHI + R++T+LYKVEPG
Sbjct: 769 HFHELTALVDSYPQ---------VQNLHVVAHISEGTVEEGSEIHKKREVTLLYKVEPGF 819
Query: 827 CDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
DQSFGIHVAE FP+ V+ +A+ KA ELEDF
Sbjct: 820 SDQSFGIHVAELVRFPQKVINMAKRKADELEDF 852
>gi|326473055|gb|EGD97064.1| DNA mismatch repair protein Msh2 [Trichophyton tonsurans CBS
112818]
Length = 935
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/937 (41%), Positives = 566/937 (60%), Gaps = 50/937 (5%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+++L D VR FDR D+YTAHG +A +IA+T Y TT+ +R
Sbjct: 5 PELKVDDEV--GFIKFFRSLDAEDESTVRVFDRGDWYTAHGADAEYIARTVYKTTSVIRT 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE----GSGSNWRLVKSGTPGNLG 123
LG L+SV++S +F + R+ L R + ++++ SG W+L K +PGNL
Sbjct: 63 LGRSDSGLASVTLSVTVFRSFLREALF-RLNKRVQIWSSQNGASGRGWKLAKQASPGNLQ 121
Query: 124 SYEDVL---FANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L N M P+I+A+ + +G+ + D + R LG++EF+D+ ++
Sbjct: 122 DVEEELGGASGGNAMDTAPIILAVKAATKAKEMRHVGVCFADASVRELGVSEFVDNDLYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES L+ LG KECL+P E K E LR CGV +TER + F T+D+ QDL R
Sbjct: 182 NFESLLIQLGVKECLIPAEGQKKDVELAKLRQIADSCGVAITERPVSAFGTKDIEQDLSR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ P + ++A G+ AL+SY +SD SN+G Y + K+ L YM+LD++A+
Sbjct: 242 LLKDETGPAMLPQTDLKLAMGSASALISYLNAMSDPSNFGQYQLYKHDLAQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D+ KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 RALNLMPGPRDSMKNMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHKDIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
DT LRQ +++ HL+ I D+ RL ++ +A L+ +V++YQ IR+P +I S +
Sbjct: 361 IDTELRQTMQENHLRSIPDLYRLAKRFQRGKANLEDVVRVYQVVIRIPGFINSFEGVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ + + Y D L L+ D L K +VET+VDL+ L+N E++I +D L ++ +
Sbjct: 421 QYQTPLDAEYTDKLRKLSQD--LGKLAEMVETTVDLEALDNHEFIIKPEFDDSLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + S H++ +K L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRHDMDSEHRRD-------TEKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQEC 529
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ + + LA +L+ L
Sbjct: 530 STQKNGVYFTTSTMQALRREHDQLSMNYNRTQTGLVSEVVNVAASYCPLLEQLAGILAHL 589
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA +++ PT Y RP I+P G+ IL+ +RHPC+E QD + FI ND LIR +S
Sbjct: 590 DVIVSFAHVSAHAPTAYVRPKIHPRGTGNTILKEARHPCMEMQDDITFITNDVSLIRDES 649
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GV
Sbjct: 650 SFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGV 709
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI+ +LFAT
Sbjct: 710 STFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIKCFSLFAT 769
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI---------DSTSRKLTMLYKVEPGAC 827
HFHELTAL V+N HV A I +++T+LY+VEPG C
Sbjct: 770 HFHELTALEERYPK--------AVSNLHVVAFIGDGPAAEGKQKKKQEVTLLYRVEPGVC 821
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMS 887
DQSFGIHVAE FP+ VV +AR+KA ELEDFT S D K + + ++ + P +++
Sbjct: 822 DQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSSGA-DGDGKQKTAAAVEKFT-PEEVA 879
Query: 888 RGAARAHQFLKEFS---DMPL-ETMDLKEALERVKRM 920
G A L ++ + P E M ++E +R++ +
Sbjct: 880 EGNALLKAMLVKWKAEVEAPGNENMSMEEKKQRLREL 916
>gi|145252302|ref|XP_001397664.1| DNA mismatch repair protein msh-2 [Aspergillus niger CBS 513.88]
gi|134083212|emb|CAK42850.1| unnamed protein product [Aspergillus niger]
Length = 945
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/881 (42%), Positives = 553/881 (62%), Gaps = 39/881 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDT-------RAVRFFDRRDYYTAHGENATFIAKTYYHT 61
P+LK+D + GF+ FY+++ + + +R FDR D+Y+AHG A FIA+T Y T
Sbjct: 5 PDLKVDDEV--GFIRFYRSISSSSDNDNNNNETIRVFDRGDWYSAHGAEAEFIARTVYKT 62
Query: 62 TTALRQLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSGSNWRLVKSG 117
T+ +R LG + + L SV++S +F R+ L R + +E++ G G W+L+K
Sbjct: 63 TSVIRNLGRSDTGGLPSVTMSVTVFRNFLREALF-RLNRRVEIWGSASGRGGQWKLIKQA 121
Query: 118 TPGNLGSYEDVLFANNEMQ---DTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFL 173
+PGNL E+ L + + P+I+A+ + + ++G+ + D + R LG++EFL
Sbjct: 122 SPGNLQDVEEELGSVGGLNIEAGAPIILAVKISAKAGEARSVGVCFADASVRELGVSEFL 181
Query: 174 DDSHFTNVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDL 232
D+ ++N+ES ++ LG KECL+ +A K E +R+ + CG+ ++ER +F RD+
Sbjct: 182 DNDVYSNLESLVIQLGVKECLVQMDAGRKDVELGKVRNIMDSCGIAVSERHSGDFGVRDI 241
Query: 233 VQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
QDL RL+R + ++A G+ AL+ Y +++D SN+G Y + ++ L +M+
Sbjct: 242 EQDLTRLLRDERSAGTLPQTELKLAMGSAAALIKYLGVMTDPSNFGQYRLYQHDLSQFMK 301
Query: 293 LDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
LDS+A+RALN++ D +K+ SLFGL+N C +G RLL WLKQPL+D EI R
Sbjct: 302 LDSSALRALNLMPGPRDGSKSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDKAEIEKRQQ 360
Query: 353 IVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V++FV DT LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++L
Sbjct: 361 LVESFVMDTELRQTMQEEHLRSIPDLYRLAKRFQRKQATLEDVVRVYQVAIRLPGFVASL 420
Query: 412 QQYEGQFSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSS 465
+ +++ E+Y PLE+ + D+L K +VET+VDLD LEN E++I
Sbjct: 421 E-------NVMDEQYQTPLEAEYTSKLRSHSDNLAKLEEMVETTVDLDALENHEFIIKPE 473
Query: 466 YDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
+D L ++ + + L + S H++ DLD VDK L L+ G FR+T+ E I
Sbjct: 474 FDESLRIIRKKLDKLRHDMDSEHRRVGGDLDQEVDKKLFLENHRVHGWCFRLTRNEAGCI 533
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
R K ++ T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ +
Sbjct: 534 RNK--REYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNRTQTGLVSEVVGVAASYCPV 591
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFI 645
+ LA +L+ LDV++SFA A PTPY RP I+P G+ +L+ +RHPC+E QD ++FI
Sbjct: 592 LEQLAGVLAHLDVIVSFAHCAVHAPTPYVRPKIHPRGTGNTVLKEARHPCMEMQDDISFI 651
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
ND LIR +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI AR
Sbjct: 652 TNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDCILAR 711
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V
Sbjct: 712 VGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIV 771
Query: 766 EEIRAPTLFATHFHELTALAH---ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKV 822
EIR LFATHFHELTALA ++A + +G + DS ++T+LY+V
Sbjct: 772 TEIRCFGLFATHFHELTALADRYPKSAKNLHVVAFIGDGTGNEEDSKDSKRDQVTLLYRV 831
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
EPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT S
Sbjct: 832 EPGICDQSFGIHVAELVRFPEKVVNMARQKADELEDFTSSG 872
>gi|242767113|ref|XP_002341306.1| DNA mismatch repair protein Msh2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218724502|gb|EED23919.1| DNA mismatch repair protein Msh2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 944
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/878 (43%), Positives = 546/878 (62%), Gaps = 40/878 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-------DTRAVRFFDRRDYYTAHGENATFIAKTYYHT 61
PELK+D + GF+ F+++LP+ + +R FDR D+YTAHG +A FIA+T Y T
Sbjct: 5 PELKVDDEV--GFIRFFRSLPSKDAINESNPTTIRLFDRGDWYTAHGTDAEFIARTVYKT 62
Query: 62 TTALRQLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSGSNWRLVKSG 117
T+ LR LG + S L SV++S +F R+ L R + +E++ E W+L K
Sbjct: 63 TSVLRTLGRSDSGGLPSVTLSVTVFRNFLREALF-RLNKRIEIWVSAESGRGQWKLGKQA 121
Query: 118 TPGNLGSYEDVL--FANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLD 174
+PGNL E+ L + M P+I+A+ + R + IG+ + D + R LG++EFLD
Sbjct: 122 SPGNLQDVEEELGGAGGSAMDSAPIILAVKVSARSSEAKNIGVCFADASVRELGVSEFLD 181
Query: 175 DSHFTNVESALVALGCKECLLPTEAVKS-SECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
+ ++N ES ++ LG KEC++ ++ K +E LR CG+ +TER +F TRD+
Sbjct: 182 NDVYSNFESLVIQLGVKECVIQLDSSKKDAELAKLRAIADTCGIAITERPAADFGTRDIE 241
Query: 234 QDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
QDL RL+R + ++A GA +L+ Y ++SD +N+G Y + ++ L YM+L
Sbjct: 242 QDLTRLLRDERSAATLPQTELKLAMGAAASLIKYLGVMSDSTNFGQYQLYQHDLSQYMKL 301
Query: 294 DSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
D++A+RALN++ D KN SL+GL+N C +G RLL WLKQPL+D EI R +
Sbjct: 302 DASALRALNLMPGPRDGAKNMSLYGLLNH-CKTPVGSRLLAQWLKQPLMDQVEIEKRHQL 360
Query: 354 VQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSAL 411
V+AFV DT LRQ +++ HL+ I D+ RL ++ +A L+ +V++YQ +IRLP +IRS
Sbjct: 361 VEAFVVDTELRQTMQEEHLRAIPDLYRLAKRFQRSQANLEDVVRVYQVAIRLPGFIRSFE 420
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+ Q+ + + ++Y L ++++ L +VET+VDLD L+N E++I +D L
Sbjct: 421 NIMDEQYQTPLDDQYTTKLRNMSNS--LANLEEMVETTVDLDALDNHEFIIKPEFDDSLR 478
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + + L + H++ A DL+ ++K L ++ G FR+T+ E IR K
Sbjct: 479 VIRKKLDKLRYDMDVEHRRVAKDLNQDMEKKLFMENHRVHGWCFRLTRNEAGCIRNK--R 536
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
++ T+K+GV FT +++L ++ ++ Y Q LV V+ A ++ + + LA
Sbjct: 537 EYQECSTQKNGVYFTTRTMQELRREHDQLSSNYNRTQSGLVQEVVNVAASYCPVLEQLAG 596
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
L+ LDV++SFA ++ PT YTRP ++P G+ IL+ +RHPC+E QD ++FI ND L
Sbjct: 597 TLAHLDVIVSFAHVSVHAPTAYTRPKMHPRGTGNTILKEARHPCMEMQDDISFITNDVSL 656
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+R S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D
Sbjct: 657 LRDVSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCTEAELTIFDCILARVGASDS 716
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI
Sbjct: 717 QLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVREIGCF 776
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-------DSTSRKLTMLYKVEP 824
LFATHFHELTALA V N HV A I S R++T+LY+VEP
Sbjct: 777 GLFATHFHELTALADRYPK--------AVKNLHVVAFIGDAKEGESSKKREVTLLYRVEP 828
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
G CDQSFGIHVAE FPE VV +AR+KA ELEDFT +
Sbjct: 829 GVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTTA 866
>gi|327262719|ref|XP_003216171.1| PREDICTED: DNA mismatch repair protein Msh2-like [Anolis
carolinensis]
Length = 953
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/923 (41%), Positives = 567/923 (61%), Gaps = 42/923 (4%)
Query: 20 GFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV 78
GF+ +LP + +RFF+R DYYT HG +A A + T +R LG G L SV
Sbjct: 36 GFVRAVLSLPEKPSTTIRFFERGDYYTVHGTDAFLAASEVFKTRGVIRALGKGPRTLDSV 95
Query: 79 SVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGNLGSYEDVLFA 131
++SK+ FE+ RDLLL R + E+Y+ N W L G+PGN+ +EDVLF
Sbjct: 96 ALSKSNFESFLRDLLLVR-QYRAEVYKNKAGNKSTKESEWYLAYKGSPGNIAQFEDVLFG 154
Query: 132 NNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCK 191
N+++ + ++ + + +G+G+VD R L + EF+D+ F+N+E+ LV +G K
Sbjct: 155 NHDISSSVGVMGIKLLSADGQKVVGVGFVDTLMRKLEVCEFVDNEQFSNLEALLVQMGPK 214
Query: 192 ECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLV 251
ECLLP ++ + LR ++ R G+++T +KK++F +D+ QDL+RL+R ++ V
Sbjct: 215 ECLLPM-GENGADMEKLRQSIQRGGILITNKKKSDFLPKDITQDLNRLLRSKK---KEHV 270
Query: 252 SGF-------EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL 304
S ++A +L A + Y ELL+D+SN+G + + + L+ YM LD AA RALN+
Sbjct: 271 SSAALPEMDKQVAISSLAAAIKYLELLNDDSNFGQFELSTFDLNQYMTLDHAAARALNLF 330
Query: 305 E-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
S + SL GL+N+ C G+RL++ W+KQPL+D N+I RL++V+AFV+D L
Sbjct: 331 PGSSGNTQSTQSLSGLLNK-CKTPQGQRLVNQWIKQPLMDKNKIEERLNLVEAFVEDAEL 389
Query: 364 RQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
RQ L++ L+R D R+ +K+ A LQ K+YQS ++P + L + +G L+
Sbjct: 390 RQSLQEDILRRFPDFSRIAKKFQKK-ATLQDCYKIYQSVNQIPNVIHVLGKTDGNHDMLL 448
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
+ ++ PL+ L D + F ++E ++D++ +EN EY++ S D L+ ++ + LE
Sbjct: 449 EAVFIRPLKELHSD--FSNFQMMIEETLDMNTVENHEYLVKPSIDPNLAGIRKVMDKLEE 506
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
++ K AS+L L K++KL+ Q+GH FRIT +EE +R L ++ VLET+K+G
Sbjct: 507 KMRGALKTAASELSLEAGKSIKLECNAQYGHHFRITYREEKVLRNNL--KYKVLETQKNG 564
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKF+N LK L ++Y K +EY+ Q +V +I A + E + L ++++LD ++SF
Sbjct: 565 VKFSNIALKDLNEEYIKNRKEYEEMQDVVVKEIINVASGYKEPIQRLNDVIAQLDAVVSF 624
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
A +++ P PY RP I G I+L+ +RHPC+E QD V+FIPND +GK F IIT
Sbjct: 625 AQASNAAPMPYVRPTILEKGEGGIVLKAARHPCIEVQDDVSFIPNDVTFEKGKQMFHIIT 684
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKST+IRQ GV +LMAQ+G FVPCD A I++ DCI ARVGAGD QL+GVSTFM E
Sbjct: 685 GPNMGGKSTYIRQAGVIVLMAQIGCFVPCDSADITIVDCILARVGAGDSQLKGVSTFMAE 744
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLET+SIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATHFHELT
Sbjct: 745 MLETSSILRTATENSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELT 804
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
AL E + V N HV+A +T LTMLY+V+ G CDQSFGIHVAE A FP
Sbjct: 805 ALDEE---------IPTVNNLHVTAL--TTDDTLTMLYRVKKGVCDQSFGIHVAELAAFP 853
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP-NDMSRGAARAHQFLKEFS 901
+ V+ A+ KA ELE+F ++ + + K E G + G FL +
Sbjct: 854 KHVIENAKAKALELEEF--QSIGNPEGKEEDGDGEPAAKKCYREKEEGEKIIQDFLTKVK 911
Query: 902 DMPLETMDLKEALERVKRMKDDL 924
MPLE M + ++K +K+++
Sbjct: 912 AMPLEDMSETDIQTKLKELKNEV 934
>gi|119491961|ref|XP_001263475.1| DNA mismatch repair protein Msh2, putative [Neosartorya fischeri
NRRL 181]
gi|119411635|gb|EAW21578.1| DNA mismatch repair protein Msh2, putative [Neosartorya fischeri
NRRL 181]
Length = 940
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/910 (42%), Positives = 560/910 (61%), Gaps = 50/910 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDT--RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK+D + GF+ FY++L +D +R FDR D+Y+AHG A +IA+T Y TT+ LR
Sbjct: 5 PDLKVDDEV--GFIRFYRSLSSDGNDETIRVFDRGDWYSAHGAEAEYIARTVYKTTSVLR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPGNL 122
LG + + L SV++S +F R+ L + + +E++ +G+ W+L+K +PGNL
Sbjct: 63 NLGRSETGGLPSVTMSVTVFRNFLREALF-KLNKRVEIWGSNGAGRGQWKLMKQASPGNL 121
Query: 123 GSYEDVLFANNE--MQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L + M+ PVI+A+ + + + +G+ + D + R LG++EFLD+ ++
Sbjct: 122 QDVEEELGSVGALAMESAPVILAVKISAKASEARGVGVCFADASVRELGVSEFLDNDVYS 181
Query: 180 NVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ +A K E +R CG+ ++ER +F +D+ QDL R
Sbjct: 182 NFESLIIQLGVKECLVQMDANRKDVELGKIRAIADNCGIAISERPVADFGVKDIEQDLTR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L+R + ++A G+ AL+ Y ++SD SN+G Y + ++ L +M+LD++A+
Sbjct: 242 LLRDERSAATLPQTELKLAMGSASALIKYLGVMSDPSNFGQYQLYQHDLSQFMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D ++ SLFGL+N C +G RLL WLKQPL+D+ EI R +V+AFV
Sbjct: 302 RALNLMPGPRDGSRTMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLAEIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
++T LRQ L++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP S+L+
Sbjct: 361 ENTELRQTLQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVSSLE----- 415
Query: 418 FSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++ E+Y PLE+ + D L K +VET+VDL LEN E++I +D L
Sbjct: 416 --NVMDEQYQTPLETEYTSKLRSHSDSLAKLEEMVETTVDLAALENHEFIIKPEFDDSLR 473
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + + L + H++ A DLD VDK L L+ G FR+T+ E IR K
Sbjct: 474 IIRKKLDKLRHDMDVEHRRVAKDLDQEVDKKLFLENHRVHGWCFRLTRNEAGCIRNK--R 531
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
++ T+K+GV FT + ++ L ++ ++ Y Q LVN V+ A ++ + + LA
Sbjct: 532 EYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNRTQTGLVNEVVNVAASYCPVLEQLAG 591
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LDV++SFA A PT Y RP ++P G+ +L+ +RHPC+E QD ++FI ND L
Sbjct: 592 VLAHLDVIVSFAHAAVHAPTAYVRPKMHPRGTGNTVLKEARHPCMEMQDDISFITNDVSL 651
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
IR +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D
Sbjct: 652 IRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDCILARVGASDS 711
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR
Sbjct: 712 QLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCF 771
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-----------DSTSRKLTMLY 820
LFATHFHELTALA V N HV A I S +++T+LY
Sbjct: 772 GLFATHFHELTALADRYPK--------SVKNLHVVAFIGDGTNDNAGEEKSKKQQVTLLY 823
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV-GSKRKR 879
+VEPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT + A + + G ++
Sbjct: 824 RVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSAEAQGQQAGVSMDGYSQEE 883
Query: 880 ISDPNDMSRG 889
+ + + +G
Sbjct: 884 VEEGTALLKG 893
>gi|378732144|gb|EHY58603.1| DNA mismatch repair protein msh-2 [Exophiala dermatitidis
NIH/UT8656]
Length = 932
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/878 (42%), Positives = 555/878 (63%), Gaps = 46/878 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLP---NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK++ + GF+ +++LP + +R FDR D+Y+AHGE+A FIA+T Y TT +
Sbjct: 5 PELKVEDEG--GFIRTFRSLPPKPDGGNTIRVFDRADWYSAHGEDAEFIARTVYKTTAVI 62
Query: 66 RQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG-SNWRLVKSGTPGNLGS 124
R LG +AL SV++S +F + R+ L + +E++E +G W L + +PGNL +
Sbjct: 63 RNLGRSDNALPSVTMSTTVFRNLLREALF-KLGKRVEIWEATGRGQWTLARQASPGNLQA 121
Query: 125 YEDVLFANNEMQ--DTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L + Q P+I+A+ + + ++G+ + D + R LG++EFLD+ F+N
Sbjct: 122 VEEELGTGMDSQGDSAPIILAVKISAKAGEARSVGVCFADASVRELGVSEFLDNDLFSNF 181
Query: 182 ESALVALGCKECLLPTEAVKS-SECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
ES L+ LG KEC++PTE K E LR + CG+ ++ER ++ T+D+ QDL RL+
Sbjct: 182 ESLLIQLGVKECIVPTEGSKKDPELTKLRQIIDSCGIAISERPAADYGTKDIEQDLARLL 241
Query: 241 RG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+G + P DL ++A G+ AL+ Y +L+D SN+G + + ++ L +M+LD+A
Sbjct: 242 KGENAIGLLPQTDL----KLAMGSASALIKYLGVLTDPSNFGQFRLYQHDLSHFMKLDAA 297
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A+RALN++ D K+ SLFGL+N C +G RLL WLKQPL+ ++EI R +V+A
Sbjct: 298 ALRALNLMPGPRDGAKSMSLFGLLNH-CKTPIGGRLLAQWLKQPLMSLSEIEKRQQLVEA 356
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F++DT LRQ +++ HL+ I D+ RL ++++A L+ +V+ YQ IRLP AL+
Sbjct: 357 FIEDTELRQSMQEEHLRSIPDLYRLAKKFQRKQANLEDVVRAYQVIIRLPGFIGALE--- 413
Query: 416 GQFSSLIKERYLDPLES-----LTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
+++ E+Y +PL++ L + + L K +VET++DLD L+ E++I S +D
Sbjct: 414 ----AVVDEKYQEPLQAEYTSKLKELSNFLEKLAEMVETTIDLDALDRHEFIIKSEFD-- 467
Query: 470 LSALKNEQESLERQIHSL---HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L+N + L+R H + H++ DL+ +DK L L+ G+ FR+T+ E IR
Sbjct: 468 -DRLRNIRAKLDRAKHDMDVEHRRVGKDLNQELDKKLYLENHRVHGYCFRLTRNEAGCIR 526
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K +Q+ + T+K+GV FT KL++L +Y ++ Y Q LV+ V+ A +++ +
Sbjct: 527 NK--SQYREISTQKNGVYFTTQKLQELRREYDQLSSSYNRQQSSLVSEVVTVASSYTPVI 584
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIP 646
+ LA +++ LDV++S A ++ PT Y RP ++ GD +L+ +RHPC+EAQD +NFI
Sbjct: 585 EQLAAIIAHLDVVVSLAHVSVHAPTAYVRPKMHERGTGDTVLKEARHPCMEAQDDINFIT 644
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND +L R S F IITGPNMGGKST+IR +G LMAQ+G FVPC A +++ DCI ARV
Sbjct: 645 NDVELKRESSRFLIITGPNMGGKSTYIRTIGCIALMAQIGCFVPCSEAELTIFDCILARV 704
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GA D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E +V
Sbjct: 705 GASDSQLKGVSTFMAEMLETANILKSATRDSLIIIDELGRGTSTYDGFGLAWAISEEIVA 764
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS----RKLTMLYKV 822
+I A FATHFHELTALA + N +V +A D+ + R++T+LY+V
Sbjct: 765 QIGAFGCFATHFHELTALADRHPNAVKNLHVVAFVGDKDTATGDTAASTKRREVTLLYRV 824
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
EPG DQSFGIHVAE FPE VV +AR KA ELEDFT
Sbjct: 825 EPGVSDQSFGIHVAELVRFPEKVVNMARRKAEELEDFT 862
>gi|406862019|gb|EKD15071.1| MutS domain V [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 916
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/871 (43%), Positives = 544/871 (62%), Gaps = 47/871 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ +K+LP D +R FDR D+YTAHGE+A+F+A+T Y TT+ LRQ
Sbjct: 5 PELKVDDEG--GFIKLFKSLPAKDDETIRIFDRGDWYTAHGEDASFVARTVYKTTSVLRQ 62
Query: 68 LGTG-SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS-NWRLVKSGTPGNLGSY 125
LG S L SV+++ ++ + R++L R +E++ +G NW++ K +PGNL
Sbjct: 63 LGKNDSTGLPSVTMTITVYRNLLREVLF-RLGKRVEVWGTTGRMNWKITKQASPGNLQDI 121
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
E+ L ++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N ES
Sbjct: 122 EEEL--GGQIDGAPIILAVKVSAKASEARNVGVCFADASVRELGVSEFLDNDLYSNFESL 179
Query: 185 LVALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
L+ LG KEC++ + + K E L+ + CG+ ++ER +F T+D+ QDL RL++
Sbjct: 180 LIQLGVKECIIQVDKSEKDVEMTKLKTIIDSCGIAISERPAADFGTKDIDQDLARLLKDE 239
Query: 242 --GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
P DL ++A G+ +L+ Y ++ D SN+G Y + ++ L +M+LD++A++
Sbjct: 240 KAAGTLPQTDL----KLAMGSAASLIKYLGVMHDSSNFGQYQLYQHDLSQFMKLDASALK 295
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
ALN++ D K SLFGL++ C +G+RLL WLKQPL+ +EI R +V+AFV+
Sbjct: 296 ALNLMPGPRDGAKTMSLFGLLDH-CKTPVGRRLLSQWLKQPLMSRDEIEKRQQLVEAFVE 354
Query: 360 DTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQF 418
DT LRQ +++ H++ I D+ RL +K+ A L+ +V+ Q + LP AL+
Sbjct: 355 DTELRQTIQEEHMRSIPDLFRLTKRFQKKLATLEDVVRASQVVLSLPGFIGALE------ 408
Query: 419 SSLIKERYLDPLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
++ E+Y PLE + L K +VET+VDL EN EY+I +D GL
Sbjct: 409 -GVMDEKYQGPLEETYTSKLREYLESLAKLQEMVETTVDLQAAENHEYIIKPEFDDGLRI 467
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
++ + + ++ ++ H+ + DL +DK L L+ Q G R+T+ E IR K Q
Sbjct: 468 IRKKLDKMKVEMDQEHRAASKDLGQEMDKKLFLENHKQHGWCLRLTRTEAGCIRNKRNYQ 527
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
T+K+GV FT KL+ + ++ ++ E Y Q LVN V+ A ++ + + LA +
Sbjct: 528 --ECSTQKNGVYFTTQKLQSIRREFDQLSENYNRTQSSLVNEVVSVAASYCPVLELLANV 585
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
L+ +DV++SFA + PT Y RP I+P G+ +L G+RHPC+E QD + FI ND L
Sbjct: 586 LAHMDVIISFAHCSVHAPTSYVRPKIHPRGEGNTVLVGARHPCMEMQDDIQFITNDVTLK 645
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
RG+S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPCD A +++ DCI ARVGA D Q
Sbjct: 646 RGESEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCDEAELTIFDCILARVGASDSQ 705
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI +
Sbjct: 706 LKGVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFS 765
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID---STSRKLTMLYKVEPGACDQ 829
+FATHFHELTAL +Q V N HV AHID R++T+LYKVE G CDQ
Sbjct: 766 MFATHFHELTAL---------VEQYPQVHNLHVVAHIDDNGKAKREVTLLYKVEEGVCDQ 816
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELEDFT 860
SFGIHVAE FPE VV +A+ KA ELEDFT
Sbjct: 817 SFGIHVAELVRFPEKVVNMAKRKADELEDFT 847
>gi|338714299|ref|XP_001917820.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh2-like [Equus caballus]
Length = 937
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/936 (41%), Positives = 573/936 (61%), Gaps = 48/936 (5%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + ++ +G
Sbjct: 9 LQLESAAEAGFVRFFQGMPEKPTXTVRLFDRGDFYTAHGEDALLAAREVFKXQGVVKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGIKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRC--GVMLTERKKTEFKTRDLVQD-LDR 238
E+ L+ +G KEC+LP + + LR + R + +TERK+ K ++ ++ +R
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQVIQRGEFXIKITERKRLXHKRYNIHRERYNR 246
Query: 239 LVRG--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSY 290
L++G +V P + ++A +L A++ + ELLSD+SN+G + + + Y
Sbjct: 247 LLKGKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQY 302
Query: 291 MRLDSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
M+LD AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I
Sbjct: 303 MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEE 361
Query: 350 RLDIVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIR 408
RL++V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP +
Sbjct: 362 RLNLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI 421
Query: 409 SALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDT 468
AL++YEG+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D
Sbjct: 422 QALEKYEGKHQTLLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDP 479
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKK 528
LS L+ + LE+++ S A DL L K +KLD TQFG+ FR+T KEE +R
Sbjct: 480 NLSELREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN- 538
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++
Sbjct: 539 -NKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQT 597
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPND 648
L +L++LD ++SFA +++ P PY RP I G I L SRH CVE QD V FIPND
Sbjct: 598 LNDVLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLRASRHACVEVQDEVAFIPND 657
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +++ DCI ARVGA
Sbjct: 658 VHFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVTIVDCILARVGA 717
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
GD QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I
Sbjct: 718 GDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKI 777
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACD 828
A +FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CD
Sbjct: 778 GAFCMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGICD 826
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSR 888
QSFGIHVAE ANFP V+ A++KA ELE+F + ++E +KR + + +
Sbjct: 827 QSFGIHVAELANFPRHVIECAKQKALELEEFQNIGESQEYDEMEPAAKRCYL----EREQ 882
Query: 889 GAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
G +FL + +P M + ++K++K ++
Sbjct: 883 GEKIIQEFLSKVKQVPFTEMSEENITIKLKQLKAEV 918
>gi|258566327|ref|XP_002583908.1| DNA mismatch repair protein msh-2 [Uncinocarpus reesii 1704]
gi|237907609|gb|EEP82010.1| DNA mismatch repair protein msh-2 [Uncinocarpus reesii 1704]
Length = 1447
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/874 (43%), Positives = 545/874 (62%), Gaps = 32/874 (3%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ F+++LP +D+ VR FDR D+YTAHG +A +IA+T Y TT+ LR
Sbjct: 510 PELKVDDEV--GFIRFFRSLPPKDDSATVRVFDRGDWYTAHGSDAEYIARTVYKTTSVLR 567
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN----WRLVKSGTPGN 121
LG + + L SV+++ +F R+ L R LE++ G W+L K +PGN
Sbjct: 568 TLGRSDTSGLPSVTMTVTVFRNFLREALF-RLSMRLEIWSSQGGAGKGAWKLAKQASPGN 626
Query: 122 LGSYEDVLFANNEMQDT-PVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
L ED L + M DT P+I+A+ + + + +G+ + D + R LG++EF D+ ++
Sbjct: 627 LQDVEDELGSAGGMMDTSPIILAVKISAKASETRHVGVCFADASVRELGVSEFDDNDLYS 686
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ + K E +R CG+ ++ R ++F TRD+ QDL R
Sbjct: 687 NFESLVIQLGVKECLVTADGQKKDIELAKIRSIADSCGIAISSRPASDFATRDIDQDLAR 746
Query: 239 LVRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L++ P DL ++A G+ AL+ Y +SD SN+G Y + ++ L YM+LD
Sbjct: 747 LLKNEHATGTLPQTDL----KLAMGSAAALIKYLGAMSDPSNFGQYQLYQHDLSQYMKLD 802
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
SAA+RALN++ D K+ SL+GL+N C +G RLL WLKQPL++ N+I R +V
Sbjct: 803 SAALRALNLMPGPRDGAKSMSLYGLLNH-CKTPVGGRLLAQWLKQPLMNHNDIEKRQQLV 861
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQ 412
+AFV DT LRQ +++ HL+ I D+ RL ++ A L+ +V++YQ IRLP +I +
Sbjct: 862 EAFVSDTDLRQTMQEDHLRSIPDLYRLAKKFQRNVANLEDVVRIYQVVIRLPGFINTLEA 921
Query: 413 QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
+ Q+ ++ Y + +L++ K +VET+VDL+ L++ E++I +D L
Sbjct: 922 VMDEQYQEPLETEYTSKIRNLSNS--FGKLAEMVETTVDLEALDHHEFIIKPEFDESLRT 979
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
++ + + L + + HK DL+ ++K L L+ G FR+T+ E IR K +
Sbjct: 980 IRKKLDRLRHDMDAEHKHVGHDLNQDIEKKLFLENHRVHGWCFRLTRNEAGCIRNK--RE 1037
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
+ T+K+GV FT + ++ L ++ ++ + Y Q LVN V+ A ++ + + LA +
Sbjct: 1038 YQECSTQKNGVYFTTSTMQSLRREHDQLSQNYNRTQTGLVNEVVNVAASYCPLLEQLAGV 1097
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
L+ LDV++SFA ++ PTPY RP ++P G+ IL+ +RHPC+E QD ++FI ND LI
Sbjct: 1098 LAHLDVIVSFAHVSVHAPTPYVRPKVHPRGTGNTILKEARHPCMEMQDDISFITNDVSLI 1157
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
R +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D Q
Sbjct: 1158 RDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCTEAELTIFDCILARVGASDSQ 1217
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR
Sbjct: 1218 LKGVSTFMAEMLETANILKTATSESLIIIDELGRGTSTYDGFGLAWAISEHIVAEIRCFG 1277
Query: 773 LFATHFHELTALAH---ENANEFNTKQMVGVANYHVSAHIDS-TSRKLTMLYKVEPGACD 828
LFATHFHELTAL ++A + +G + S R++T+LY+VEPG CD
Sbjct: 1278 LFATHFHELTALEERYPKSAKNLHVVAFIGDGSSETQNGTPSKKKREVTLLYRVEPGVCD 1337
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
QSFGIHVAE FPE VV +AR+KA ELEDFT S
Sbjct: 1338 QSFGIHVAELVRFPEKVVNMARQKAEELEDFTNS 1371
>gi|226288050|gb|EEH43563.1| DNA mismatch repair protein msh-2 [Paracoccidioides brasiliensis
Pb18]
Length = 941
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/878 (43%), Positives = 545/878 (62%), Gaps = 39/878 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ F+++LP +D+ VR FDR D+YTAHG +A +IA+T Y TT+ L+
Sbjct: 5 PELKVDDEG--GFIRFFRSLPAKDDSSTVRVFDRGDFYTAHGPDAEYIARTVYKTTSVLK 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY--EGSG-SNWRLVKSGTPGNL 122
LG + S L SV+++ +F R+ L R +E++ +G G +NW L K +PGNL
Sbjct: 63 SLGRSDSGGLPSVTMTVTVFRNFLREALF-RLSMRVEIWVSQGGGKANWTLAKQASPGNL 121
Query: 123 GSYEDVLFANNE-MQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTN 180
E+ L A+ M +P+I+A+ + + + +G+ + D T R LG++EF+D+ ++N
Sbjct: 122 QDVEEDLGASGAAMDSSPIILAVKISAKASEARYVGVCFADATVRELGVSEFVDNDLYSN 181
Query: 181 VESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
ES ++ LG KECL+ E K E +R L CG+ +++R +F T+D+ QDL RL
Sbjct: 182 FESLVIQLGVKECLVMAETQKKDVELGKIRSILDSCGIAISQRPIADFGTKDIEQDLARL 241
Query: 240 VRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
+R + P + ++A G+ AL+ Y +SD SN+G Y + ++ L YM+LD++A+R
Sbjct: 242 LRDEMAPGILPQTDLKLAMGSAAALIKYLGAMSDASNFGQYQLYQHDLSQYMKLDASALR 301
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
ALN++ D KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 ALNLMPGPRDGAKNMSLYGLLNH-CKTPVGSRLLAQWLKQPLMNHADIEKRQQLVEAFVV 360
Query: 360 DTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEGQ 417
DT LRQ +++ L+ I D+ RL ++ A L+ +V++YQ IRLP +I + + Q
Sbjct: 361 DTGLRQTMQEDQLRSIPDLYRLAKRFLRKMANLEDVVRVYQVVIRLPGFINTLEAVIDEQ 420
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
+ ++ Y L SL+D+ +K +VET+VDLD L+N E++I +D L ++ +
Sbjct: 421 YQEPLETEYTSKLRSLSDN--FSKLAEMVETTVDLDALDNHEFIIKPEFDDSLRIIREKL 478
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
+ L+ + H+ DL+ DK L L+ G FR+T+ E IR K ++
Sbjct: 479 DKLKHDMDVEHRMVGKDLNQDTDKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQECS 536
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K+GV FT + ++ L ++ ++ Y Q LV V+ A ++ + + LA++L+ LD
Sbjct: 537 TQKNGVYFTTSTMQSLRREHDQLSSNYNRTQAGLVQEVVNVAASYCPLLEQLASVLAHLD 596
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
V++SFA ++ P+ Y RP I+P G IL+ +RHPC+E QD ++FI ND L+R +S
Sbjct: 597 VIVSFAHVSVHAPSAYVRPKIHPRGTGHTILKEARHPCMEMQDDISFITNDVSLLRNESS 656
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GVS
Sbjct: 657 FLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGVS 716
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH++ EIR LFATH
Sbjct: 717 TFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIRCFALFATH 776
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHI------------DSTSRKLTMLYKVEPG 825
FHELTAL V N HV A I D R++T+LY+VEPG
Sbjct: 777 FHELTALQDRYPK--------SVKNLHVVAFISDGKDAKRNESADRKKREVTLLYRVEPG 828
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
CDQSFGIHVAE FPE VV +AR+KA ELEDFT +A
Sbjct: 829 VCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSTA 866
>gi|169767466|ref|XP_001818204.1| DNA mismatch repair protein msh-2 [Aspergillus oryzae RIB40]
gi|238484337|ref|XP_002373407.1| DNA mismatch repair protein Msh2, putative [Aspergillus flavus
NRRL3357]
gi|83766059|dbj|BAE56202.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701457|gb|EED57795.1| DNA mismatch repair protein Msh2, putative [Aspergillus flavus
NRRL3357]
Length = 940
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/880 (43%), Positives = 548/880 (62%), Gaps = 49/880 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDT--RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ FY++L ++ +R FDR D+Y+AHG A FIA+T Y TT+ LR
Sbjct: 5 PELKVDDEV--GFIRFYRSLAANSNDETIRVFDRGDWYSAHGAEAEFIARTVYKTTSILR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPGNL 122
LG + S L SV++S +F R+ L R + +E++ G+ +W+LVK +PGNL
Sbjct: 63 NLGRSDSGGLPSVTMSVTVFRNFLREALF-RLNKRIEIWGSVGTGKGHWKLVKQASPGNL 121
Query: 123 GSYEDVL--FANNEMQDTPVIVALFPNFRE-NGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L M P+I+A+ + + ++G+ + D + R LG++EFLD+ ++
Sbjct: 122 QDVEEELGSVGGLSMDSAPIILAVKISAKAAEARSVGVCFADASVRELGVSEFLDNDIYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ +A K E +R CG+ ++ER ++ +D+ QDL R
Sbjct: 182 NFESLIIQLGVKECLVQMDANKKDVELGKIRAIADSCGIAISERPVADYGVKDIEQDLTR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L+R + ++A G+ AL+ Y +++D +N+G Y + ++ L +M+LDS+A+
Sbjct: 242 LLRDERSAGTLPQTELKLAMGSASALIKYLGVMTDPTNFGQYQLYQHDLSQFMKLDSSAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D +K+ SLFGL+N C +G RLL WLKQPL+D+ EI R +V+AFV
Sbjct: 302 RALNLMPGPRDGSKSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLAEIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
+T LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++L+
Sbjct: 361 VNTELRQTMQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVNSLE----- 415
Query: 418 FSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++ E Y PLE+ + D L K +VET+VDLD LEN E++I +D L
Sbjct: 416 --NVMDEEYQTPLETEYTSNLRSHSDSLAKLEEMVETTVDLDALENHEFIIKPEFDESLR 473
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + + L + H++ A DLD ++K L L+ G FR+T+ E IR K
Sbjct: 474 IIRKKLDKLRHDMGVEHRRVARDLDQDIEKKLFLENHRVHGWCFRLTRNESGCIRNK--R 531
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
++ T+K+GV FT + ++ L ++ ++ Y Q LVN V+ A ++ + + LA
Sbjct: 532 EYQECSTQKNGVYFTTSTMQTLRREHDQLSSNYNRTQTGLVNEVVNVAASYCPVLERLAG 591
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+++ LDV++SFA + PTPY RP ++P G+ +L+ +RHPC+E QD ++FI ND L
Sbjct: 592 VIAHLDVIVSFAHASVHAPTPYARPKMHPRGTGNTVLKEARHPCMEMQDDISFITNDVAL 651
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+R +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D
Sbjct: 652 VRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCTEAELTIFDCILARVGASDS 711
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR
Sbjct: 712 QLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCF 771
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI------DSTSRK-----LTMLY 820
LFATHFHELTALA V N HV A I DS +K +T+LY
Sbjct: 772 GLFATHFHELTALADRYPK--------SVKNLHVVAFIGDGTDDDSEDKKSKRNQVTLLY 823
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
+VEPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT
Sbjct: 824 RVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELEDFT 863
>gi|225679033|gb|EEH17317.1| DNA mismatch repair protein MSH2 [Paracoccidioides brasiliensis
Pb03]
Length = 941
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/878 (43%), Positives = 546/878 (62%), Gaps = 39/878 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ F+++LP +D+ VR FDR D+YTAHG +A +IA+T Y TT+ L+
Sbjct: 5 PELKVDDEG--GFIRFFRSLPAKDDSSTVRVFDRGDFYTAHGPDAEYIARTVYKTTSVLK 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY--EGSG-SNWRLVKSGTPGNL 122
LG + S L SV+++ +F R+ L R +E++ +G G +NW L K +PGNL
Sbjct: 63 SLGRSDSGGLPSVTMTVTVFRNFLREALF-RLSMRVEIWVSQGGGKANWTLAKQASPGNL 121
Query: 123 GSYEDVLFANNE-MQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTN 180
E+ L A+ M +P+I+A+ + + + +G+ + D T R LG++EF+D+ ++N
Sbjct: 122 QDVEEDLGASGAAMDSSPIILAVKISAKASEARYVGVCFADATVRELGVSEFVDNDLYSN 181
Query: 181 VESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
ES ++ LG KECL+ E K E +R L CG+ +++R +F T+D+ QDL RL
Sbjct: 182 FESLVIQLGVKECLVMAETQKKDVELGKIRSILDSCGIAISQRPIADFGTKDIEQDLARL 241
Query: 240 VRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
+R + P + ++A G+ AL+ Y +SD SN+G Y + ++ L YM+LD++A+R
Sbjct: 242 LRDEMAPGILPQTDLKLAMGSAAALIKYLGAMSDASNFGQYQLYQHDLSQYMKLDASALR 301
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
ALN++ D KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 ALNLMPGPRDGAKNMSLYGLLNH-CKTPVGSRLLAQWLKQPLMNHADIEKRQQLVEAFVV 360
Query: 360 DTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEGQ 417
DT LRQ +++ L+ I D+ RL ++ A L+ +V++YQ IRLP +I + + Q
Sbjct: 361 DTELRQTMQEDQLRSIPDLYRLAKRFLRKMANLEDVVRVYQVVIRLPGFINTLEAVIDEQ 420
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
+ ++ Y L SL+D+ +K +VET+VDLD L+N E++I +D L ++ +
Sbjct: 421 YQEPLETEYTSKLRSLSDN--FSKLAEMVETTVDLDALDNHEFIIKPEFDDSLRIIREKL 478
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
+ L+ + H+ DL+ DK L L+ G FR+T+ E IR K ++
Sbjct: 479 DKLKHDMDVEHRMVGKDLNQDTDKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQECS 536
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K+GV FT + ++ L ++ ++ Y Q LV V+ A ++ + + LA++L+ LD
Sbjct: 537 TQKNGVYFTTSTMQSLRREHDQLSSNYNRTQAGLVQEVVNVAASYCPLLEQLASVLAHLD 596
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
V++SFA ++ P+ Y RP I+P G IL+ +RHPC+E QD ++FI ND L+R +S
Sbjct: 597 VIVSFAHVSVHAPSAYVRPKIHPRGTGHTILKEARHPCMEMQDDISFITNDVSLLRNESS 656
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GVS
Sbjct: 657 FLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGVS 716
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH++ EIR LFATH
Sbjct: 717 TFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIRCFALFATH 776
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHI------------DSTSRKLTMLYKVEPG 825
FHELTAL + V N HV A I D R++T+LY+VEPG
Sbjct: 777 FHELTAL--------QDRYPKSVKNLHVVAFISDGKDAKRNESADRKKREVTLLYRVEPG 828
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
CDQSFGIHVAE FPE VV +AR+KA ELEDFT +A
Sbjct: 829 VCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSTA 866
>gi|295659293|ref|XP_002790205.1| DNA mismatch repair protein msh-2 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226281910|gb|EEH37476.1| DNA mismatch repair protein msh-2 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 941
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/879 (43%), Positives = 547/879 (62%), Gaps = 39/879 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ F+++LP +D+ VR FDR D+YTAHG +A +IA+T Y TT+ L+
Sbjct: 5 PELKVDDEG--GFIRFFRSLPAKDDSSTVRVFDRGDFYTAHGPDAEYIARTVYKTTSVLK 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY--EGSG-SNWRLVKSGTPGNL 122
LG + + L SV+++ +F R+ L R +E++ +G G +NW L K +PGNL
Sbjct: 63 SLGRSDTGGLPSVTMTVTVFRNFLREALF-RLSMRVEIWVSQGGGKANWTLAKQASPGNL 121
Query: 123 GSYEDVLFANNE-MQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTN 180
E+ L A+ M +P+I+A+ + + + +G+ + D + R LG++EF+D+ ++N
Sbjct: 122 QDVEEDLGASGAAMDSSPIILAVKVSAKASEARLVGVCFADASVRELGVSEFVDNDLYSN 181
Query: 181 VESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
ES ++ LG KECL+ E K E +R L CG+ +++R +F T+D+ QDL RL
Sbjct: 182 FESLVIQLGVKECLVIAETQKKDVELGKIRSILDSCGIAISQRPIADFGTKDIEQDLARL 241
Query: 240 VRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
+R + P + ++A G+ AL+ Y +SD SN+G Y + ++ L YM+LD++A+R
Sbjct: 242 LRDEMAPGILPQTDLKLAMGSAAALIKYLGAMSDASNFGQYQLYQHDLSQYMKLDASALR 301
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
ALN++ D KN SL+GL+N C +G RLL WLKQPL++ +I R +V+AFV
Sbjct: 302 ALNLMPGPRDGAKNMSLYGLLNH-CKTPVGSRLLAQWLKQPLMNHADIEKRQQLVEAFVV 360
Query: 360 DTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEGQ 417
DT LRQ +++ L+ I D+ RL ++ A L+ +V++YQ IRLP +I + + Q
Sbjct: 361 DTELRQTMQEDQLRSIPDLYRLAKRFLRKMANLEDVVRVYQVVIRLPGFINTLEAVIDEQ 420
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
+ ++ Y L SL+D+ +K +VET+VDLD L+N E++I +D L ++ +
Sbjct: 421 YQEPLETEYTSKLRSLSDN--FSKLAEMVETTVDLDALDNHEFIIKPEFDDSLRIIRKKL 478
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
+ L+ + H+ DL+ DK L L+ G FR+T+ E IR K ++
Sbjct: 479 DELKHDMDVEHRMVGKDLNQDTDKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQECS 536
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K+GV FT + ++ L ++ ++ Y Q LV V+ A ++ + + LA++L+ LD
Sbjct: 537 TQKNGVYFTTSTMQSLRREHDQLSSNYNRTQAGLVQEVVNVAASYCPLLEQLASVLAHLD 596
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
V++SFA ++ P+ Y RP I+P G+ IL+ +RHPC+E QD ++FI ND L+R +S
Sbjct: 597 VIVSFAHVSVHAPSAYVRPKIHPRGTGNTILKEARHPCMEMQDDISFITNDVSLLRNESS 656
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GVS
Sbjct: 657 FLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGVS 716
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH++ EIR LFATH
Sbjct: 717 TFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIITEIRCFALFATH 776
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHI------------DSTSRKLTMLYKVEPG 825
FHELTAL V N HV A I D R++T+LY+VEPG
Sbjct: 777 FHELTALQDRYPK--------SVKNLHVVAFISDGKDAKQNDSADRKKREVTLLYRVEPG 828
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
CDQSFGIHVAE FPE VV +AR+KA ELEDFT +AV
Sbjct: 829 VCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTTTAV 867
>gi|70999834|ref|XP_754634.1| DNA mismatch repair protein Msh2 [Aspergillus fumigatus Af293]
gi|66852271|gb|EAL92596.1| DNA mismatch repair protein Msh2, putative [Aspergillus fumigatus
Af293]
gi|159127648|gb|EDP52763.1| DNA mismatch repair protein Msh2, putative [Aspergillus fumigatus
A1163]
Length = 940
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/945 (41%), Positives = 575/945 (60%), Gaps = 57/945 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDT--RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK+D + GF+ FY +L +D +R FDR D+Y+AHG A FIA+T Y TT+ LR
Sbjct: 5 PDLKVDDEV--GFIRFYHSLSSDGNDETIRVFDRGDWYSAHGAEAEFIARTVYKTTSVLR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPGNL 122
LG + + L SV++S +F R+ L + + +E++ +G+ W+L+K +PGNL
Sbjct: 63 NLGRSETGGLPSVTMSVTVFRNFLREALF-KLNKRVEIWGSNGAGRGQWKLMKQASPGNL 121
Query: 123 GSYEDVL--FANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L M+ PVI+A+ + + + +G+ + D + R LG++EFLD+ ++
Sbjct: 122 QDVEEELGSVGGLAMESAPVILAVKISAKASEARGVGVCFADASVRELGVSEFLDNDVYS 181
Query: 180 NVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ + K E +R CG+ ++ER +F +D+ QDL R
Sbjct: 182 NFESLIIQLGVKECLVQMDTNRKDVELGKIRAIADNCGIAISERPVADFGVKDIEQDLTR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L+R + ++A G+ AL+ Y +++D SN+G Y + ++ L +M+LD++A+
Sbjct: 242 LLRDERSAATLPQTELKLAMGSASALIKYLGVMADPSNFGQYQLYQHDLSQFMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D ++ SLFGL+N C +G RLL WLKQPL+D+ EI R +V+AFV
Sbjct: 302 RALNLMPGPRDGSRTMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLAEIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
++T LRQ L++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP S+L+
Sbjct: 361 ENTELRQTLQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVSSLE----- 415
Query: 418 FSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++ E+Y PLE+ + D L K +VET+VDL LEN E++I +D L
Sbjct: 416 --NVMDEQYQTPLETEYTSKLRSHSDSLAKLEEMVETTVDLAALENHEFIIKPEFDDSLR 473
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + + L + H++ A DLD VDK L L+ G FR+T+ E IR K
Sbjct: 474 IIRKKLDKLRHDMDVEHRRVAKDLDQEVDKKLFLENHRVHGWCFRLTRNEAGCIRNK--R 531
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
++ T+K+GV FT + ++ L ++ ++ Y Q LVN V+ A ++ + + LA
Sbjct: 532 EYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNRTQSGLVNEVVNVAASYCPVLEQLAG 591
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LDV++SFA A PT Y RP ++P G+ IL+ +RHPC+E QD ++FI ND L
Sbjct: 592 VLAHLDVIVSFAHAAVHAPTAYVRPKMHPRGTGNTILKEARHPCMEMQDDISFITNDVSL 651
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
IR +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D
Sbjct: 652 IRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDCILARVGASDS 711
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR
Sbjct: 712 QLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCF 771
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-DSTS----------RKLTMLY 820
LFATHFHELTALA V N HV A I D T+ +++T+LY
Sbjct: 772 GLFATHFHELTALADRYPK--------SVKNLHVVAFIGDGTNDNAGEERPKKQQVTLLY 823
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV-GSKRKR 879
+VEPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT + A + G ++
Sbjct: 824 RVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSAEAQGQQAGASIDGYSQEE 883
Query: 880 ISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+ + + + +G LK ++ +E+ D K +E +++ DL
Sbjct: 884 VEEGSALLKG-----MLLKWKAE--IESHDRKLTVEEKRQIMRDL 921
>gi|169612762|ref|XP_001799798.1| hypothetical protein SNOG_09508 [Phaeosphaeria nodorum SN15]
gi|160702578|gb|EAT82773.2| hypothetical protein SNOG_09508 [Phaeosphaeria nodorum SN15]
Length = 1234
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/866 (43%), Positives = 538/866 (62%), Gaps = 53/866 (6%)
Query: 20 GFLSFYKTLPNDTR-AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV 78
GF F++ LP +R FDR++YY+AHGE+A FIA T Y TT +R+LG L SV
Sbjct: 14 GFCKFFRNLPEKNEDTIRIFDRKEYYSAHGEDAVFIANTVYKTTAVIRKLGR-DPGLDSV 72
Query: 79 SVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGSYEDVLFANNEMQ 136
+++ ++ RD L R +E+++ G +W++ K +PGNL E+ L +++
Sbjct: 73 TMTNMVYRNFLRDALF-RLSKRIEIWQSPGQRMDWKMAKQASPGNLQDLEEEL--GGQIE 129
Query: 137 DTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLL 195
+ P+I+A+ + + ++G+ + D + R LG+ EFLD+ ++N ES L+ LG KECL+
Sbjct: 130 NAPIILAVKVTAKASEARSVGVCFADASVRELGVTEFLDNDLYSNFESLLIQLGVKECLI 189
Query: 196 PTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--GSVEPVRDLVS 252
+A K E LR CG + ER T+F T+D+ QDL RL++ P DL
Sbjct: 190 QLDASKKDIELNKLRTIADNCGCAVAERSATDFGTKDIEQDLPRLLKDEAGTLPQMDL-- 247
Query: 253 GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANK 312
++A GA L+ Y L+SD SN+G Y + ++ L YM+LD+AA++ALN++ D K
Sbjct: 248 --KLAMGAASCLIRYLGLMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMPGPRDGAK 305
Query: 313 NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HL 371
N SL+GL+N C G RLL WLKQPL++V EI R +V+AFV+DT LRQ +++ HL
Sbjct: 306 NMSLYGLLNH-CKTPTGSRLLAQWLKQPLMNVAEIERRQQLVEAFVNDTELRQTMQEEHL 364
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
+ I D+ RL +++ A L+ +V+ YQ IRLP S+L+ S++ E+Y DPL+
Sbjct: 365 RSIPDLYRLSKKFQRKVANLEDVVRAYQVIIRLPGFLSSLE-------SVMDEKYKDPLD 417
Query: 432 SLTDDDHLNKFIA-------LVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
+ D L +F A +VET+VDLD L+N E++I +D L ++ + L+R +
Sbjct: 418 A-EYTDKLRQFSAAFGGLQEMVETTVDLDALDNHEFIIKPEFDEALRTIRKRLDKLKRDM 476
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
S H + DL+ +K L L+ G FR+T+ E IR+K Q+ ++T+K+GV
Sbjct: 477 ESEHARVGDDLNQDTEKKLFLENHKVHGWCFRLTRNESGAIRQK--KQYQEIQTQKNGVY 534
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
FT + L+ ++ ++ E Y Q LVN V+ A ++ + + LA +L+ LDV+++FA
Sbjct: 535 FTTSTLQDKRREFDQMSENYNRTQSGLVNEVVSVASSYVPVVEKLAAVLAHLDVIVAFAH 594
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGP 664
++ PT YTRP ++ G+ IL+ +RHPC+E QD ++FI ND L RG+S F IITGP
Sbjct: 595 VSVHAPTSYTRPKMHARGTGNTILKEARHPCMEQQDDISFITNDISLKRGESEFLIITGP 654
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NMGGKSTFIRQ GV LMAQ+G FVP A +++ DCI ARVGA D ++GVSTFM EML
Sbjct: 655 NMGGKSTFIRQTGVIALMAQIGCFVPAAEAELTIFDCILARVGASDSSIKGVSTFMAEML 714
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
ETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++V+EI A LFATHFHELTAL
Sbjct: 715 ETANILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAFALFATHFHELTAL 774
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTS----------RKLTMLYKVEPGACDQSFGIH 834
++ V N HV AHI + R++T+LYKVEPG DQSFGIH
Sbjct: 775 SNTYPQ---------VENLHVVAHISEGTEETDSGVQKKREVTLLYKVEPGFSDQSFGIH 825
Query: 835 VAEFANFPESVVTLAREKAAELEDFT 860
VAE FP+ V+ +A+ KA ELEDF+
Sbjct: 826 VAELVRFPQKVINMAKRKADELEDFS 851
>gi|350633597|gb|EHA21962.1| hypothetical protein ASPNIDRAFT_183201 [Aspergillus niger ATCC
1015]
Length = 1653
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/881 (42%), Positives = 553/881 (62%), Gaps = 39/881 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDT-------RAVRFFDRRDYYTAHGENATFIAKTYYHT 61
P+LK+D + GF+ FY+++ + + +R FDR D+Y+AHG A FIA+T Y T
Sbjct: 5 PDLKVDDEV--GFIRFYRSISSSSDNDNNNNETIRVFDRGDWYSAHGAEAEFIARTVYKT 62
Query: 62 TTALRQLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSGSNWRLVKSG 117
T+ +R LG + + L SV++S +F R+ L R + +E++ G G W+L+K
Sbjct: 63 TSVIRNLGRSDTGGLPSVTMSVTVFRNFLREALF-RLNRRVEIWGSASGRGGQWKLIKQA 121
Query: 118 TPGNLGSYEDVLFANNEMQ---DTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFL 173
+PGNL E+ L + + P+I+A+ + + ++G+ + D + R LG++EFL
Sbjct: 122 SPGNLQDVEEELGSVGGLNIEAGAPIILAVKISAKAGEARSVGVCFADASVRELGVSEFL 181
Query: 174 DDSHFTNVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDL 232
D+ ++N+ES ++ LG KECL+ +A K E +R+ + CG+ ++ER +F RD+
Sbjct: 182 DNDVYSNLESLVIQLGVKECLVQMDAGRKDVELGKVRNIMDSCGIAVSERHSGDFGVRDI 241
Query: 233 VQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
QDL RL+R + ++A G+ AL+ Y +++D SN+G Y + ++ L +M+
Sbjct: 242 EQDLTRLLRDERSAGTLPQTELKLAMGSAAALIKYLGVMTDPSNFGQYRLYQHDLSQFMK 301
Query: 293 LDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
LDS+A+RALN++ D +K+ SLFGL+N C +G RLL WLKQPL+D EI R
Sbjct: 302 LDSSALRALNLMPGPRDGSKSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDKAEIEKRQQ 360
Query: 353 IVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V++FV DT LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++L
Sbjct: 361 LVESFVMDTELRQTMQEEHLRSIPDLYRLAKRFQRKQATLEDVVRVYQVAIRLPGFVASL 420
Query: 412 QQYEGQFSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSS 465
+ +++ E+Y PLE+ + D+L K +VET+VDLD LEN E++I
Sbjct: 421 E-------NVMDEQYQTPLEAEYTSKLRSHSDNLAKLEEMVETTVDLDALENHEFIIKPE 473
Query: 466 YDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
+D L ++ + + L + S H++ DLD VDK L L+ G FR+T+ E I
Sbjct: 474 FDESLRIIRKKLDKLRHDMDSEHRRVGRDLDQEVDKKLFLENHRVHGWCFRLTRNEAGCI 533
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
R K ++ T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ +
Sbjct: 534 RNK--REYQECSTQKNGVYFTTSTMQALRREHDQLSSNYNRTQTGLVSEVVGVAASYCPV 591
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFI 645
+ LA +L+ LDV++SFA A PTPY RP I+P G+ +L+ +RHPC+E QD ++FI
Sbjct: 592 LEQLAGVLAHLDVIVSFAHCAVHAPTPYVRPKIHPRGTGNTVLKEARHPCMEMQDDISFI 651
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
ND LIR +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI AR
Sbjct: 652 TNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDCILAR 711
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V
Sbjct: 712 VGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIV 771
Query: 766 EEIRAPTLFATHFHELTALAH---ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKV 822
EIR LFATHFHELTALA ++A + +G + DS ++T+LY+V
Sbjct: 772 TEIRCFGLFATHFHELTALADRYPKSAKNLHVVAFIGDGTGNEEDSKDSKRDQVTLLYRV 831
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
EPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT S
Sbjct: 832 EPGICDQSFGIHVAELVRFPEKVVNMARQKADELEDFTSSG 872
>gi|340966637|gb|EGS22144.1| DNA mismatch repair protein msh2-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 940
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/954 (42%), Positives = 568/954 (59%), Gaps = 68/954 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLP---NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK+D + GF+ F+++LP DT +R FDR D+YTAHGE+A FIA+T Y TT+ +
Sbjct: 5 PELKVDDEH--GFIRFFRSLPPVGEDT--IRIFDRNDWYTAHGEDANFIARTVYKTTSVV 60
Query: 66 RQLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNL 122
R LG L SV+++ +F R+ L + +E++ + NW+L K +PGNL
Sbjct: 61 RMLGKNDHTGLPSVTMTVTVFRQFLREALY-KLGKRIEIWTSANGRMNWKLAKQASPGNL 119
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
ED L E P+I+A+ + + + T+G+ + D T R LG++EFLD+ ++N
Sbjct: 120 QDVEDDLGGYGE--SAPIILAVKISAKASEARTVGVCFADATARELGVSEFLDNDLYSNF 177
Query: 182 ESALVALGCKECLLPTEAVKSS----ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLD 237
ES L+ LG KECL+ + E LR + C + ++ER ++F T+D+ QDL
Sbjct: 178 ESLLIQLGVKECLIQIDKADKDKKDPELAKLRQIIDSCNIAISERPSSDFATKDIEQDLA 237
Query: 238 RLVR----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
RL++ ++ P DL ++A G+ AL+ Y +L D +N+G + + ++ L +M+L
Sbjct: 238 RLLKDERSATMLPQTDL----KLAMGSAAALIKYLGVLHDPANFGQFRLYQHDLAQFMKL 293
Query: 294 DSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
D+AA++ALN++ D +K SLFGL+N C +G RLL WLKQPL+D +EI R +
Sbjct: 294 DAAALKALNLMPGPRDGSKTMSLFGLLNH-CKTPLGSRLLAQWLKQPLMDKDEIEKRQQL 352
Query: 354 VQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V+AF +DT LRQ +++ HL+ + D+ RL ++++A L+ +V++YQ IRLP +
Sbjct: 353 VEAFANDTELRQTMQEEHLRAVPDLYRLAMRFQRKKANLEDVVRVYQVVIRLPSLL---- 408
Query: 413 QYEGQFSSLIKERYLDPL-ESLTD-----DDHLNKFIALVETSVDLDQLENGEYMISSSY 466
G ++ E Y DPL E+ T+ D L KF +VET+VDLD L+N E++I +
Sbjct: 409 ---GTLEGVMDEAYRDPLDEAYTNKLRELSDSLAKFQDMVETTVDLDALDNHEFIIKPEF 465
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
D L ++ + L + + A DL DK + L+ G R+T+ E IR
Sbjct: 466 DDSLRIIRKRLDKLRSDMEREFAEAARDLGQERDKKIFLENHKVHGWCMRLTRTEAGCIR 525
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K +++ T+K+GV FT L+ ++ ++ Y Q LV+ V+ A ++ +
Sbjct: 526 NK--PKYMECSTQKNGVYFTTKTLQAYRREFDQLNLNYNRTQSGLVSEVVSVAASYVPVL 583
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIP 646
+ LA +L+ LDV++SFA A PT Y RP I+P G IL+ +RHPC+E QD V FI
Sbjct: 584 ERLAGVLAHLDVIVSFAHCAVHAPTSYVRPKIHPRGEGQTILKEARHPCLEVQDDVQFIT 643
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND +L R KS F IITGPNMGGKST+IRQ+GV LMAQVGSFVPC A +++ D I ARV
Sbjct: 644 NDVELTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQVGSFVPCSYAELTIFDSILARV 703
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GA D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+
Sbjct: 704 GASDSQLKGVSTFMAEMLETANILKSATRESLIIIDELGRGTSTYDGFGLAWAISEHIVQ 763
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS------------- 813
EI LFATHFHELTALA ++ V N HV+AHI TS
Sbjct: 764 EIGCFALFATHFHELTALADQHPQ---------VRNLHVTAHISGTSTANGSGPRKADTK 814
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV 873
R++T+LYKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT + + A V
Sbjct: 815 REVTLLYKVEPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTTNH--EEGADSNV 872
Query: 874 GSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
G D+ G+A L + D + +A E VKR+++ + KD
Sbjct: 873 GGVAAEGYSKQDVEEGSALLKDLLVRWKDEVQSAGGMNKA-EMVKRLREMVAKD 925
>gi|322697506|gb|EFY89285.1| DNA mismatch repair protein MSH2 [Metarhizium acridum CQMa 102]
Length = 922
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/879 (44%), Positives = 542/879 (61%), Gaps = 57/879 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELKLD + GF+ FYK+LP+ DT +R FDR D+YTAHG+NA+FIAKT Y TT+ L
Sbjct: 5 PELKLDDEG--GFIRFYKSLPDVGEDT--IRIFDRGDWYTAHGDNASFIAKTVYKTTSVL 60
Query: 66 RQLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNL 122
RQLG L SV+++ +F R+ L + +E++E NW+ VK +PGNL
Sbjct: 61 RQLGRNDHTGLPSVTMTVTVFRQFLREALF-KLGKRIEIWESPSGRMNWKCVKQASPGNL 119
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTI-GLGYVDLTKRVLGLAEFLDDSHFTNV 181
ED L +++ P+I+A+ + + + I G+ + D + R LG++EFLD+ ++N
Sbjct: 120 QDIEDDL--GGQIESAPMIIAVKISAKASEARIVGVCFADASVRELGVSEFLDNDLYSNF 177
Query: 182 ESALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
ES L+ LG +EC++ + K E LR + CGV + ER +F TRD+ QDL R
Sbjct: 178 ESLLIQLGVRECVIQLDKGDKDKDPELAKLRQIIDNCGVAIAERPAGDFGTRDIEQDLAR 237
Query: 239 LVRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L++ ++ P DL ++A G+ +L+ Y +L D SN+G Y++ ++ L +M+LD
Sbjct: 238 LLKDDKSVNLLPQTDL----KLAMGSAASLIKYLGVLQDPSNFGQYHLYQHDLAQFMKLD 293
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
+AA++ALN++ D +K S++G++N C +G RLL WLKQPL+D +EI R +V
Sbjct: 294 AAALKALNLMPGPRDGSKTMSIYGVLNH-CKTPVGSRLLAQWLKQPLMDKDEIEKRQQLV 352
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+AF DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP
Sbjct: 353 EAFFTDTELRQTMQEEHLRSVPDLYRLSKRFQRGKANLEDVVRAYQVVIRLP-------G 405
Query: 414 YEGQFSSLIKERYLDPLESLTD------DDHLNKFIALVETSVDLDQLENGEYMISSSYD 467
+ G F ++ E Y DPL++ D+L K +VE +VDLD L+ EY+I S YD
Sbjct: 406 FIGTFEGVMDEAYRDPLDAAYTTKLRELSDNLGKLQDMVEQTVDLDALDRHEYIIKSEYD 465
Query: 468 TGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKIR 526
GL ++ + + L+R I + + A DL DK + L+ + G R+T++E IR
Sbjct: 466 QGLQTIRKKLDQLDRDIRAEFHEAARDLGQEADKKIFLETSHKVHGVCMRLTRQEAGCIR 525
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K + Q T+K+GV FT K++ +Y ++ + Y Q LVN V+ A ++ +
Sbjct: 526 NKSSYQ--ECSTQKNGVYFTTKKMQSYRREYDQLSQNYNRTQSSLVNEVVHVASSYCPVL 583
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIP 646
+ LA +L+ LDV++S A + P Y RP I+ G L G+RHPC+E QD V FI
Sbjct: 584 ERLAGVLAHLDVIVSLAHCSVHAPEAYVRPKIHTRGEGQTRLIGARHPCMELQDDVQFIT 643
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND + R KS F IITGPNMGGKST+IRQ GV LMAQVG FVPC A +++ D I ARV
Sbjct: 644 NDLEFTRDKSSFLIITGPNMGGKSTYIRQAGVIALMAQVGCFVPCAEAELTIFDSILARV 703
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GA D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+
Sbjct: 704 GASDSQLKGVSTFMAEMLETANILKSATKESLIIIDELGRGTSTYDGFGLAWAISEHIVK 763
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-----DSTSRKLTMLYK 821
EI +FATHFHELTALA Q V N HV+AHI D+ R++T+LYK
Sbjct: 764 EIGCFAMFATHFHELTALA---------DQYPQVRNLHVTAHISGTGKDNNKREVTLLYK 814
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
VEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 815 VEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 853
>gi|347836210|emb|CCD50782.1| similar to DNA mismatch repair protein msh-2 [Botryotinia
fuckeliana]
Length = 923
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/875 (43%), Positives = 547/875 (62%), Gaps = 49/875 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+ LP D +R FDR D+YTAHG++ATFIA+T Y TT+ LR
Sbjct: 5 PELKVDDE--LGFIKFFTNLPQRDGETIRVFDRGDFYTAHGDDATFIARTVYKTTSVLRD 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG-SNWRLVKSGTPGNLGSYE 126
LG+ S + SV+++ +++ R+ L R +E++ SG +NW++ K+ +PGNL E
Sbjct: 63 LGSNSTKIPSVTMTVTVYKNFLREALY-RMGKRVEIFTTSGRNNWKVTKTASPGNLQDVE 121
Query: 127 DVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESAL 185
+ L P+I+A+ + + + IG+ + D + R LG++EFLD+ ++N ES L
Sbjct: 122 EEL--GGSFDAAPIILAVKVSAKASEARNIGVCFADASVRELGVSEFLDNDLYSNFESLL 179
Query: 186 VALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG-- 242
+ LG KECL+ + K E + L+ + CG TER F T+D+ QDL RL++
Sbjct: 180 IQLGVKECLIQVDRTTKDVELQKLKQIIENCGCAWTERAGGTFGTKDIEQDLARLLKDEK 239
Query: 243 --SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
V P DL ++A G+ AL++Y +L D SN+G Y + ++ L +M+LD++A++A
Sbjct: 240 STGVIPQTDL----KLAMGSAAALINYLGVLHDNSNFGQYQLYQHDLSQFMKLDASALKA 295
Query: 301 LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
LN++ D +K SL+GL+N C +G RLL WLKQPL+ + EI R +V+AFV+D
Sbjct: 296 LNLMPGPRDGSKTMSLYGLLNH-CKTPVGSRLLAQWLKQPLMSLEEIEKRQQLVEAFVED 354
Query: 361 TALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFS 419
L+Q +++ H++ I D+ RL +K+ A L+ +V+ YQ IR+P + L+
Sbjct: 355 QELKQTIQETHMRSIPDLYRLAKRFQKKLANLEDVVRAYQVVIRIPDLIKTLE------- 407
Query: 420 SLIKERYLDPL-ESLTD-----DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
++ E+Y D L E+ TD + L +VET+VDL+ ++N EY+I +D L+ +
Sbjct: 408 DVMDEKYRDALDEAYTDKLRGCNVSLGNLAEMVETTVDLEAMDNHEYIIKPEFDDSLNII 467
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ + + L+ ++ + A DL ++K + L+ G R+T+ E IR K +++
Sbjct: 468 RRKLDKLKYEMDQEFRIVAKDLGQEIEKKIFLENNKVHGWCMRLTRTEASCIRNK--SKY 525
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
+T+K+GV FT +KL + ++ ++ E Y Q LVN V+ TA ++ + + LA++L
Sbjct: 526 QECQTQKNGVYFTTSKLLSIRREFDQLSENYNRTQSSLVNEVVATAASYCPVIEQLASVL 585
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
+ LDV++S A ++ PT Y RP ++P G IL+ +RHPC+E QD V FI ND LIR
Sbjct: 586 AHLDVIVSLAHTSAHAPTSYVRPKMHPRGTGSTILKEARHPCMEMQDDVQFITNDVSLIR 645
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
+S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D QL
Sbjct: 646 EESSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQL 705
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++V EI A ++
Sbjct: 706 KGVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEYIVREIGAFSM 765
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST------SRKLTMLYKVEPGAC 827
FATHFHELTALA V N HV AHID+ R++T+LYKVE G C
Sbjct: 766 FATHFHELTALA---------DTFPQVKNLHVVAHIDTEPSSQERKREVTLLYKVEEGIC 816
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
DQSFGIHVAE FPE V+ +AR KA ELEDF S
Sbjct: 817 DQSFGIHVAELVKFPEKVIGMARRKAEELEDFGTS 851
>gi|85093179|ref|XP_959643.1| hypothetical protein NCU02230 [Neurospora crassa OR74A]
gi|3914053|sp|O13396.1|MSH2_NEUCR RecName: Full=DNA mismatch repair protein msh-2
gi|2606088|gb|AAB84225.1| DNA mismatch repair protein [Neurospora crassa]
gi|28921089|gb|EAA30407.1| hypothetical protein NCU02230 [Neurospora crassa OR74A]
Length = 937
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/954 (41%), Positives = 564/954 (59%), Gaps = 71/954 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ FYK+LP A+R FDR D+YTAHG++ATFIA+T Y TT+ +RQ
Sbjct: 5 PELKVDDEH--GFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQ 62
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG + L SV+++ +F R+ L + +E++ NW++VK +PGNL
Sbjct: 63 LGRSDHTGLPSVTMTVTVFRQFLREALF-KLGKRIEIWASPSGRMNWKVVKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L + + PVI+A+ + + + T+G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDEL--GGQFEGAPVILAVKISAKASEARTVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLLPT---EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG KEC++ E K E LR + CGV + ER EF T+D+ QDL RL+
Sbjct: 180 LLIQLGVKECIVTQDKGEKEKDPELAKLRQIIDNCGVAIAERSAGEFGTKDIEQDLSRLL 239
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ S+ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 240 KDERAASLLPQTDL----KLAMGSASALIKYLGILHDPSNFGQYQLYQHDLAQFMKLDAA 295
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D KN SL+GL+N C +G RLL WLKQPL++ EI R +V+A
Sbjct: 296 ALKALNLMPGARDGAKNMSLYGLLNH-CKTPVGSRLLSQWLKQPLMNAEEIEKRQQLVEA 354
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F +DT LRQ +++ HL+ I D+ RL ++ +A L+ +V+ YQ IRLP +
Sbjct: 355 FANDTELRQSMQEEHLRSIPDLYRLSKRFQRGKATLEDVVRAYQVVIRLP-------GFI 407
Query: 416 GQFSSLIKERYLDPLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G ++ E Y DPL+ + + D L K +VET+VDLD L+N E++I +D
Sbjct: 408 GTLEGVMDEAYRDPLDEVYTNKLRELSDSLVKLQEMVETTVDLDALDNHEFIIKPEFDDS 467
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L ++ + + L + + + A DL +K + L+ G R+T+ E IR
Sbjct: 468 LRIIRKKLDRLRTDMDNEFAEAAEDLGQEREKKIFLENHKVHGWCMRLTRTEAGCIRN-- 525
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
++++ T+K+GV FT L+ L ++ ++ + Y Q LVN V+ A ++ + + L
Sbjct: 526 NSRYLECSTQKNGVYFTTKTLQALRREFDQLSQNYNRTQSSLVNEVVGVAASYCPVLERL 585
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
A +L+ LDV++SFA + P Y RP I+P G +L +RHPC+E QD V FI ND
Sbjct: 586 AAVLAHLDVIVSFAHCSVHAPISYVRPKIHPRGTGRTVLTEARHPCMEVQDDVTFITNDV 645
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
L R S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA
Sbjct: 646 TLTREDSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSILARVGAS 705
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 706 DSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIG 765
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST----------------S 813
LFATHFHELTALA + N V N HV+AHI T
Sbjct: 766 CFALFATHFHELTALADQYPN---------VKNLHVTAHISGTDTDTDVITDEDEKAKKK 816
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV 873
R++T+LYKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT + + V
Sbjct: 817 REVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTSKHEEENGGGLGV 876
Query: 874 GSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
++ D+ G+A L ++ D KE E V R+K+ ++KD
Sbjct: 877 QYSKQ------DVEEGSALLKDVLVKWKDEVKSGRMSKE--EMVARLKELVQKD 922
>gi|367047841|ref|XP_003654300.1| hypothetical protein THITE_2117183 [Thielavia terrestris NRRL 8126]
gi|347001563|gb|AEO67964.1| hypothetical protein THITE_2117183 [Thielavia terrestris NRRL 8126]
Length = 925
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/914 (43%), Positives = 553/914 (60%), Gaps = 51/914 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+K+LP D +R FDR D+YTAHG+NA FIA+T Y TT+ +RQ
Sbjct: 5 PELKVDDEH--GFIRFFKSLPRVDEDVIRIFDRGDWYTAHGDNANFIARTVYKTTSVVRQ 62
Query: 68 LGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG L SV+++ +F R+ L + +E+Y NW++VK +PGNL
Sbjct: 63 LGRNDHTGLPSVTMTVTVFRQFLREALY-KLGKRVEIYASPNGRMNWKIVKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L + E PVI+A+ + + + +G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDDLGSLAEA--APVILAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG KECL+ E + E LR + CG+ ++ER +F T+D+ QDL RL+
Sbjct: 180 LLIQLGVKECLVQVEKADRDRDPELAKLRQIIDSCGIAISERPVADFGTKDIEQDLARLL 239
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ ++ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 240 KDERSATLLPQTDL----KLAMGSASALIKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAA 295
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D K SLFGL+N C +G RLL WLKQPL+D +EI R +V+A
Sbjct: 296 ALKALNLMPGVRDGAKTMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDKDEIEKRQQLVEA 354
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ-Y 414
FV+DT LRQ +++ HL+ I D+ RL ++ +A L+ +V+ YQ IRLP L+
Sbjct: 355 FVNDTELRQTMQEEHLRSIPDLYRLAKRFQRGKANLEDVVRAYQVVIRLPAFLGTLEGVM 414
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+ + + E Y + L L+D L K +VET+VDLD L+N E++I +D L ++
Sbjct: 415 DEAYRDALDEAYTNKLRELSDS--LAKLQEMVETTVDLDALDNHEFIIKPEFDDSLRIIR 472
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ + L + A DL DK + L+ G R+T+ E IR K ++++
Sbjct: 473 RKLDKLRSDMDREFADAAYDLGQERDKKIFLENHKVHGWCMRLTRTEAGCIRNK--SRYL 530
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
T+K+GV FT L+ ++ ++ + Y Q LVN V+ A ++S + + LA +L+
Sbjct: 531 ECSTQKNGVYFTTKTLQGYRREFDQLSQNYNRTQSGLVNEVVSVAASYSPVLERLAGVLA 590
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDV+++FA + P Y RP I+P G IL +RHPC+E QD V FI ND +L R
Sbjct: 591 HLDVIVAFAHCSVHAPISYVRPKIHPRGEGQTILREARHPCMEMQDDVQFITNDVELTRD 650
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
KS F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA D QL+
Sbjct: 651 KSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDSILARVGASDSQLK 710
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI LF
Sbjct: 711 GVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFALF 770
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHI---DSTS---RKLTMLYKVEPGACD 828
ATHFHELTALA Q V N HV+AHI DS S R++T+LYKVEPG CD
Sbjct: 771 ATHFHELTALA---------DQYPQVRNLHVTAHIGGADSKSKARREVTLLYKVEPGVCD 821
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSR 888
QSFGIHVAE FP+ VV +A+ KA ELEDFT S DA + SKR D+
Sbjct: 822 QSFGIHVAELVRFPDKVVRMAKRKADELEDFTSSNKHDGDAAADY-SKR-------DVEE 873
Query: 889 GAARAHQFLKEFSD 902
G+A L + D
Sbjct: 874 GSALLKDLLVRWKD 887
>gi|239610962|gb|EEQ87949.1| DNA mismatch repair protein msh-2 [Ajellomyces dermatitidis ER-3]
gi|327351661|gb|EGE80518.1| DNA mismatch repair protein msh-2 [Ajellomyces dermatitidis ATCC
18188]
Length = 941
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/883 (42%), Positives = 543/883 (61%), Gaps = 47/883 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ F+++LP +D+ +R FDR D++TAHG +A +IA+ Y TT+ L+
Sbjct: 5 PELKVDDEG--GFIRFFRSLPAKDDSSTIRVFDRGDFFTAHGPDAEYIARAVYKTTSVLK 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG---SNWRLVKSGTPGNL 122
LG + + L SV+++ +F R+ L R +E++ G +NW+L K +PGNL
Sbjct: 63 SLGRSDTGGLPSVTMTVTVFRNFLREALF-RLSMRVEIWASQGGGKANWKLAKQASPGNL 121
Query: 123 GSYEDVLFANN-EMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTN 180
E+ L A M P+I+A+ + + + +G+ + D + R LG++EF+D+ ++N
Sbjct: 122 QDVEEELGAGGVAMDSAPIILAVKISAKASETRQVGVCFADASVRELGVSEFVDNDLYSN 181
Query: 181 VESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
ES ++ LG KECL+ E K E LR L CG+ +++R +F T+D+ QDL RL
Sbjct: 182 FESLVIQLGVKECLITAETQKKDVELGKLRSILDSCGIAISQRPMADFGTKDIEQDLSRL 241
Query: 240 VR----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
+R P DL ++A G+ AL+ Y +SD +N+G Y + ++ L YM+LD+
Sbjct: 242 LRDERAAGALPQTDL----KLAMGSAAALIKYLGAMSDATNFGQYQLYQHDLSQYMKLDA 297
Query: 296 AAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQ 355
A+RALN++ D KN SL+GL+N C G RLL WLKQPL++ +I R +V+
Sbjct: 298 PALRALNLMPGPRDGAKNMSLYGLLNH-CKTPAGSRLLAQWLKQPLMNHEDIEKRQQLVE 356
Query: 356 AFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQ 413
AFV DT LRQ +++ HL+ I D+ RL ++ A L+ +V++YQ IRLP +I +
Sbjct: 357 AFVVDTELRQTMQEDHLRSIPDLYRLAKRFQRNLANLEDVVRVYQVVIRLPGFINTLESV 416
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+ Q+ ++ Y L +L+D +K +VET+VDLD L+N E++I +D L +
Sbjct: 417 MDEQYQGPLEAEYTAKLRNLSDS--FSKLAEMVETTVDLDALDNHEFIIKPEFDDSLRII 474
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ + + L+ + HK DL+ DK L L+ G FR+T+ E IR K ++
Sbjct: 475 RKKLDKLKHDMDVEHKIVGKDLNQDTDKKLFLENHRVHGWCFRLTRNEAGCIRNK--REY 532
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
T+K+GV FT + ++ ++ ++ Y Q LV V+ A ++ + + LA++L
Sbjct: 533 QECSTQKNGVYFTTSTMQSFRREHDQLSSNYNRTQTGLVQEVVNVAASYCPLLEQLASVL 592
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
+ LDV++SFA ++ PT Y RP I+P G+ +L+ +RHPC+E QD ++FI ND L+R
Sbjct: 593 AHLDVIVSFAHVSVHAPTAYVRPKIHPRGTGNTVLKEARHPCMEMQDDISFITNDVFLLR 652
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
+S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL
Sbjct: 653 NESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQL 712
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR L
Sbjct: 713 KGVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFAL 772
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHI---------DSTS---RKLTMLYK 821
FATHFHELTAL + N V N HV A I DST R++T+LY+
Sbjct: 773 FATHFHELTALQEQYPN--------SVKNLHVVAFIGNGTEQKENDSTGKSKREVTLLYR 824
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
VEPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT S +
Sbjct: 825 VEPGVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSSTI 867
>gi|389640915|ref|XP_003718090.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae 70-15]
gi|351640643|gb|EHA48506.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae 70-15]
gi|440475156|gb|ELQ43857.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae Y34]
gi|440487085|gb|ELQ66891.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae P131]
Length = 924
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/933 (42%), Positives = 560/933 (60%), Gaps = 72/933 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTR-AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+K+LP + +R F R DYYTAHGE+A IA+T Y +T+ +RQ
Sbjct: 5 PELKVDDEH--GFIRFFKSLPAAHKDTIRIFFRGDYYTAHGEDANLIARTVYKSTSVVRQ 62
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG + LSSV++S +F+ RD L + +E+YE + NW++ K +PGNL
Sbjct: 63 LGRSDHTGLSSVTLSITVFKQFLRDALY-KLGKRVEIYESANGRMNWKVTKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L + P+I+A+ + + + +G+ + D + R LG++EFLD+ F+N E+
Sbjct: 122 VEDEL---GQTDSAPMILAVKISSKASEARNVGVCFADASVRELGVSEFLDNDLFSNFEA 178
Query: 184 ALVALGCKECLL---PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG KECL+ E +K + L+ + CGV ++ER +F TRD+ QDL RL+
Sbjct: 179 LLIQLGVKECLIQYDKAEDLKDPDLAKLKQIIDNCGVAMSERPMADFGTRDIEQDLARLL 238
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ S+ P DL ++A GA AL+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 239 KDERSASLLPQTDL----KLAMGAASALIKYLNVLQDPSNFGQYQLFQHDLSQFMKLDAA 294
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN+ D +K SL+GL+N C +G RLL WLKQPL+ +EI R +V+A
Sbjct: 295 ALKALNLTPGARDGSKTMSLYGLLNH-CKTPVGSRLLAQWLKQPLMSKDEIEGRQQLVEA 353
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F++DT LRQ +++ HL+ I D+ RL ++++A L+ +V+ YQ IRLP +
Sbjct: 354 FMNDTELRQTMQEEHLRSIPDLYRLAKRFQRKKANLEDVVRAYQVVIRLP-------GFI 406
Query: 416 GQFSSLIKERYLDPLESLTD------DDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G ++ E Y DPL+ D L + +VET+VDLD LEN E++I +D G
Sbjct: 407 GTLEGVMDEAYRDPLDVAYTTKLRELSDSLVRLQEMVETTVDLDALENHEFIIKLEFDDG 466
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L ++ + + + ++ + A DL +K + L+ G R+T+ E IR
Sbjct: 467 LRIIRKKLDRIRTEMDREFSKAADDLGQEKEKKIFLENHKVHGFCMRLTRTEAGCIRN-- 524
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
+ + T+K+GV FT L+ L ++ ++ + Y Q LVN V+ A +++ + ++L
Sbjct: 525 NSGYQECSTQKNGVYFTTKHLQSLRREFDQLSQSYNRTQSSLVNEVVSVAASYAPLLENL 584
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
A +L+ LDV++SFA + P Y RP I+P G +L +RHPC+E QD V FI ND
Sbjct: 585 AGILAHLDVIVSFAHCSMHAPISYVRPKIHPRGQGRTLLREARHPCLEVQDDVQFITNDV 644
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
+L R S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA
Sbjct: 645 ELDRSGSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDAILARVGAS 704
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI
Sbjct: 705 DSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVVEIG 764
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS--------RKLTMLYK 821
LFATHFHELTALA ++ VAN HV+AHI T R++T+LYK
Sbjct: 765 CSALFATHFHELTALAEQHKQ---------VANLHVTAHISGTGDDAKADEKREVTLLYK 815
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS 881
VEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT +D+ ++
Sbjct: 816 VEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTTKH--NDNLGLQYSK------ 867
Query: 882 DPNDMSRGAARAHQFLKEF------SDMPLETM 908
+D+ +G+AR + L ++ DM E M
Sbjct: 868 --DDVEQGSARLKEILVQWKEEVKAGDMSREEM 898
>gi|395829795|ref|XP_003788028.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
[Otolemur garnettii]
Length = 905
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/933 (41%), Positives = 559/933 (59%), Gaps = 74/933 (7%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + E LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGEMGKLRQVIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSTVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DMAAVRALNLFQGSVEDTSGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++YEG SL+ +EN E+++ S+D LS
Sbjct: 422 EKYEGNKXSLL-------------------------------LVENHEFLVKPSFDPNLS 450
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 451 ELREIMNDLEKKMQSTLISAARDLGLEPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 508
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 509 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 568
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA ++ P PY RP I IIL+ SRHPCVE QD V FIPND
Sbjct: 569 VLAQLDAVVSFAHASNGAPVPYVRPVILEKGRRRIILKASRHPCVEVQDEVAFIPNDIYF 628
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 629 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 688
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI +++ +I A
Sbjct: 689 QLKGVSTFMAEMLETASILRSATQDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAF 748
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSF
Sbjct: 749 CMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSF 797
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
GIHVAE ANFP V+ A++KA ELE+F ++E +K+ + + +G
Sbjct: 798 GIHVAELANFPRHVIECAKQKALELEEFQNIGGSQGYDEMEPAAKKCYL----EREQGEK 853
Query: 892 RAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P M + ++K++K ++
Sbjct: 854 IIQEFLSKVKQVPFTEMSEENITIKLKQLKAEV 886
>gi|336467575|gb|EGO55739.1| hypothetical protein NEUTE1DRAFT_124099 [Neurospora tetrasperma
FGSC 2508]
gi|350287773|gb|EGZ69009.1| DNA mismatch repair protein msh-2 [Neurospora tetrasperma FGSC
2509]
Length = 937
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/954 (41%), Positives = 564/954 (59%), Gaps = 71/954 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ FYK+LP A+R FDR D+YTAHG++ATFIA+T Y TT+ +RQ
Sbjct: 5 PELKVDDEH--GFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQ 62
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG + L SV+++ +F R+ L + +E++ NW++VK +PGNL
Sbjct: 63 LGRSDHTGLPSVTMTVTVFRQFLREALF-KLGKRIEIWASPSGRMNWKVVKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L + + PVI+A+ + + + T+G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDEL--GGQFEGAPVILAVKISAKASEARTVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLLPT---EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG KEC++ E K E LR + CGV + ER EF T+D+ QDL RL+
Sbjct: 180 LLIQLGVKECIVTQDKGEKEKDPELAKLRQIIDNCGVAIAERSAGEFGTKDIEQDLSRLL 239
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ S+ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 240 KDERAASLLPQTDL----KLAMGSASALIKYLGILHDPSNFGQYQLYQHDLAQFMKLDAA 295
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D KN SL+GL+N C +G RLL WLKQPL++ EI R +V+A
Sbjct: 296 ALKALNLMPGARDGAKNMSLYGLLNH-CKTPVGSRLLSQWLKQPLMNAEEIEKRQQLVEA 354
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F +DT LRQ +++ HL+ I D+ RL ++ +A L+ +V+ YQ IRLP +
Sbjct: 355 FANDTELRQSMQEEHLRSIPDLYRLSKRFQRGKATLEDVVRAYQVVIRLP-------GFI 407
Query: 416 GQFSSLIKERYLDPLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G ++ E Y DPL+ + + D L K +VET+VDLD L+N E++I +D
Sbjct: 408 GTLEGVMDEAYRDPLDEVYTNKLRELSDSLVKLQEMVETTVDLDALDNHEFIIKPEFDDS 467
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L ++ + + L + + + A DL +K + L+ G R+T+ E IR
Sbjct: 468 LRIIRKKLDRLRTDMDNEFAEAAEDLGQEREKKIFLENHKVHGWCMRLTRTEAGCIRN-- 525
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
++++ T+K+GV FT L+ L ++ ++ + Y Q LVN V+ A ++ + + L
Sbjct: 526 NSRYLECSTQKNGVYFTTKTLQALRREFDQLSQNYNRTQSSLVNEVVGVAASYCPVLERL 585
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
A +L+ LDV++SFA + P Y RP I+P G +L +RHPC+E QD V FI ND
Sbjct: 586 AAVLAHLDVIVSFAHCSVHAPISYVRPKIHPRGTGRTVLTEARHPCMEVQDDVTFITNDV 645
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
L R S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA
Sbjct: 646 TLTREDSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSILARVGAS 705
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 706 DSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIG 765
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST----------------S 813
LFATHFHELTALA + N V N HV+AHI T
Sbjct: 766 CFALFATHFHELTALADQYPN---------VKNLHVTAHISGTDTDTDVITDEDEKAKKK 816
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV 873
R++T+LYKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT + + V
Sbjct: 817 REVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTSKHDEENGGGLGV 876
Query: 874 GSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
++ D+ G+A L ++ D KE E V R+++ ++KD
Sbjct: 877 QYSKQ------DVEEGSALLKDVLVKWKDEVKSGQISKE--EMVARLRELVQKD 922
>gi|121705444|ref|XP_001270985.1| DNA mismatch repair protein Msh2, putative [Aspergillus clavatus
NRRL 1]
gi|119399131|gb|EAW09559.1| DNA mismatch repair protein Msh2, putative [Aspergillus clavatus
NRRL 1]
Length = 940
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/870 (42%), Positives = 544/870 (62%), Gaps = 24/870 (2%)
Query: 9 PELKLDAKQARGFLSFYKTLPND--TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK+D + GF+ FY++L + +R FDR D+Y+AHG +A FIA+T Y TT+ LR
Sbjct: 5 PDLKVDDEV--GFIRFYRSLSTEGNNETIRVFDRGDWYSAHGADAEFIARTVYKTTSVLR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPGNL 122
LG + + L SV++S +F R+ L + + +E++ G+ W+LVK +PGNL
Sbjct: 63 NLGRSETGGLPSVTMSVTVFRNFLREALF-KLNKRVEIWGSGGAGRGQWKLVKQASPGNL 121
Query: 123 GSYEDVL--FANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFT 179
ED L M+ PVI+A+ + + + ++G+ + D + R LG++EFLD+ ++
Sbjct: 122 QDVEDELGSVGGLAMESAPVILAVKISAKASEARSVGVCFADASVRELGVSEFLDNDVYS 181
Query: 180 NVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ ++ K +E +R CG+ ++ER +F +D+ QDL R
Sbjct: 182 NFESLVIQLGVKECLVQMDSNRKDAELAKIRAIADNCGIAVSERPVADFGVKDIEQDLTR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L+R + ++A G+ AL+ Y ++SD SN+G Y + ++ L +M+LD++A+
Sbjct: 242 LLRDERSAGTLPQTELKLAMGSASALIKYLGVMSDPSNFGQYQLYQHDLSQFMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D ++ SLFGL+N C +G RLL WLKQPL+D+ EI R +V+AFV
Sbjct: 302 RALNLMPGPRDGSRTMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLTEIEKRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEG 416
+T LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++ S +
Sbjct: 361 TNTELRQTMQEEHLRSIPDLYRLSKRFQRKQANLEDVVRVYQVAIRLPGFVNSLENVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ + ++ Y L + +D L K +VET+VDL LEN E++I +D L ++ +
Sbjct: 421 QYQTPLEAEYTSKLRNYSDS--LAKLEEMVETTVDLAALENHEFIIKPEFDDSLRIIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L + H++ A DLD VDK L L+ G FR+T+ E IR K ++
Sbjct: 479 LDKLRHDMDVEHRRVARDLDQEVDKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + ++ L ++ ++ Y Q LVN V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSTMQALRREHDQLSSNYNRTQTGLVNEVVNVAASYCPVLEQLAGVLAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA + PT Y RP ++ G+ IL+ +RHPC+E QD ++FI ND LIR +S
Sbjct: 597 DVIVSFAHASVHAPTAYVRPKMHLRGTGNTILKEARHPCMEMQDDISFITNDVSLIRDES 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D QL+GV
Sbjct: 657 SFLVITGPNMGGKSTYIRQIGVIALMAQTGCFVPCTEAEMTIFDCILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR LFAT
Sbjct: 717 STFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFGLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGV----ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFG 832
HFHELTALA +V A+ + +S ++T+LY+VEPG CDQSFG
Sbjct: 777 HFHELTALADRYPKSVKNLHVVAFIGDGADSNADTKANSKKAQVTLLYRVEPGICDQSFG 836
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPS 862
IHVAE FPE VV +AR+KA ELEDFT S
Sbjct: 837 IHVAELVRFPEKVVNMARKKAEELEDFTSS 866
>gi|451850345|gb|EMD63647.1| hypothetical protein COCSADRAFT_118766 [Cochliobolus sativus
ND90Pr]
Length = 931
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/888 (42%), Positives = 547/888 (61%), Gaps = 66/888 (7%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PE+K + GF F++ L D VR FDR DYY+AHGE+A FIA T Y TT +R+
Sbjct: 5 PEIK--EEDESGFCKFFRNLDEKDNETVRIFDRGDYYSAHGEDAKFIANTVYKTTAVIRK 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGSY 125
LG L SV+++ +F RD L R +E+++ +G +W++VK +PGNL
Sbjct: 63 LGR-EPGLESVTMTVTVFRNFLRDALF-RLSKRIEIWQSTGKRMDWKVVKQASPGNLQDL 120
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
ED L +++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N ES
Sbjct: 121 EDEL--GGQIESAPIILAVKVSAKASEARRVGVCFADASVRELGVSEFLDNDLYSNFESL 178
Query: 185 LVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
L+ LG KECL+ ++ K E LR CG + ER +F T+D+ QDL RL++
Sbjct: 179 LIQLGVKECLVQLDSTKKDVELSKLRTIADNCGCAVAERAPADFGTKDIEQDLPRLLKDD 238
Query: 242 ---GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
GS+ P+ D ++A G+ L+ Y ++SD SN+G Y + ++ L YM+LD+AA+
Sbjct: 239 RAAGSL-PLTDQ----KLAMGSAACLIRYLGVMSDSSNFGQYQLYQHDLSQYMKLDAAAL 293
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
+ALN++ D KN SL+GL+N C G RLL WLKQPL+++++I R +V+AFV
Sbjct: 294 KALNLMPGPRDGAKNMSLYGLLNH-CKTPTGSRLLAQWLKQPLMNLSDIERRQQLVEAFV 352
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
+DT LRQ +++ HL+ I D+ RL +++ A L+ +V+ YQ IRLP SAL+
Sbjct: 353 NDTELRQTMQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSALE----- 407
Query: 418 FSSLIKERYLDPLESLTDD---DHLNKFIAL---VETSVDLDQLENGEYMISSSYDTGLS 471
++I E+Y +PL++ + + F L VET+VDL+ L+N E++I +D L
Sbjct: 408 --AVIDEQYKEPLDAEYTEKLRQYTTAFAGLQDMVETTVDLEALDNHEFIIKPEFDESLK 465
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + L+R + S H + DL+ +K L L+ G FR+T+ E IR+K
Sbjct: 466 TIRKRLDKLKRDMESEHMRVGDDLNQDTEKKLFLENHKVNGWCFRLTRNEAGCIRQK--K 523
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
Q+ + T+K+GV FT L++ ++ ++ E Y Q LVN V+ A ++ + + LA
Sbjct: 524 QYQEISTQKNGVYFTTNTLQEKRREFDQLSENYNRTQAGLVNEVVSVASSYVPVIEKLAA 583
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LDV+++FA ++ PT YTRP ++P GD +L+ +RHPC+E QD ++FI ND L
Sbjct: 584 VLAHLDVIVAFAHVSVHAPTSYTRPKMHPRGTGDTVLKEARHPCMEMQDDISFITNDVSL 643
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+R KS F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D
Sbjct: 644 VRNKSEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDS 703
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
Q++GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++++EI A
Sbjct: 704 QIKGVSTFMAEMLETANILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIIKEIGAF 763
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS------------------ 813
LFATHFHELTAL T V N HV AHI S
Sbjct: 764 ALFATHFHELTAL---------TDTYPQVQNLHVVAHISEGSSAADDDGDVDMENAAAQK 814
Query: 814 -RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
R++T+LYKVEPG DQSFGIHVAE FP+ V+ +A+ KA ELEDF+
Sbjct: 815 KREVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMAKRKADELEDFS 862
>gi|452000375|gb|EMD92836.1| hypothetical protein COCHEDRAFT_1154553 [Cochliobolus
heterostrophus C5]
Length = 931
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/888 (42%), Positives = 545/888 (61%), Gaps = 66/888 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PE+K + GF F++ L D VR FDR DYY+AHGE+A FIA T Y TT +R+
Sbjct: 5 PEIK--EEDESGFCKFFRNLEEKDNETVRIFDRGDYYSAHGEDAKFIANTVYKTTAVIRK 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGSY 125
LG L SV+++ +F RD L R +E+++ +G +W++VK +PGNL
Sbjct: 63 LGR-EPGLESVTMTVTVFRNFLRDALF-RLSKRIEIWQSTGKRMDWKVVKQASPGNLQDL 120
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
ED L +++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N ES
Sbjct: 121 EDEL--GGQIESAPIILAVKVSAKASEARRVGVCFADASVRELGVSEFLDNDLYSNFESL 178
Query: 185 LVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
L+ LG KECL+ ++ K E LR CG + ER +F T+D+ QDL RL++
Sbjct: 179 LIQLGVKECLVQLDSTKKDVELSKLRTIADNCGCAVAERASADFGTKDIEQDLPRLLKDD 238
Query: 242 ---GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
GS+ P+ D ++A G+ L+ Y ++SD SN+G Y + ++ L YM+LD+AA+
Sbjct: 239 RTAGSL-PLTDQ----KLAMGSAACLIRYLGVMSDSSNFGQYQLYQHDLSQYMKLDAAAL 293
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
+ALN++ D KN SL+GL+N C G RLL WLKQPL+D++EI R +V+AFV
Sbjct: 294 KALNLMPGPRDGAKNMSLYGLLNH-CKTPTGSRLLAQWLKQPLMDISEIERRQQLVEAFV 352
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
+DT LRQ +++ HL+ I D+ RL +++ A L+ +V+ YQ IRLP S+
Sbjct: 353 NDTELRQTMQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSS------- 405
Query: 418 FSSLIKERYLDPLESLTDD---DHLNKFIAL---VETSVDLDQLENGEYMISSSYDTGLS 471
F ++I E+Y +PL++ + + F L VET+VDL+ L+N E++I +D L
Sbjct: 406 FEAVIDEQYKEPLDAEYTEKLRQYTTAFAGLQDMVETTVDLEALDNHEFIIKPEFDESLR 465
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + L+R + S H + DL+ +K L L+ G FR+T+ E IR+K
Sbjct: 466 TIRKRLDKLKRDMESEHMRVGDDLNQDTEKKLFLENHKVNGWCFRLTRNEAGCIRQK--K 523
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
Q+ + T+K+GV FT L++ ++ ++ E Y Q LVN V+ A ++ + + LA
Sbjct: 524 QYQEISTQKNGVYFTTNTLQEKRREFDQLSENYNRTQAGLVNEVVSVASSYVPVIEKLAA 583
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LDV+++FA ++ PT YTRP ++ GD +L+ +RHPC+E QD ++FI ND L
Sbjct: 584 VLAHLDVIVAFAHVSVHAPTSYTRPKMHARGTGDTVLKEARHPCMEMQDDISFITNDVSL 643
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+R KS F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D
Sbjct: 644 VRNKSEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDS 703
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
Q++GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++++EI A
Sbjct: 704 QIKGVSTFMAEMLETANILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIIKEIGAF 763
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS------------------ 813
LFATHFHELTAL T V N HV AHI S
Sbjct: 764 ALFATHFHELTAL---------TDTYPQVQNLHVVAHISEGSSAPDDDGDVDMENAAAQK 814
Query: 814 -RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
R++T+LYKVEPG DQSFGIHVAE FP+ V+ +A+ KA ELEDF+
Sbjct: 815 KREVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMAKRKADELEDFS 862
>gi|116203461|ref|XP_001227541.1| DNA mismatch repair protein msh-2 [Chaetomium globosum CBS 148.51]
gi|88175742|gb|EAQ83210.1| DNA mismatch repair protein msh-2 [Chaetomium globosum CBS 148.51]
Length = 942
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/948 (41%), Positives = 561/948 (59%), Gaps = 65/948 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+K+LP D +R FDR D+YTAHGENA FIA+T Y TT+ +RQ
Sbjct: 5 PELKVDDEH--GFIRFFKSLPTVDDDVIRIFDRGDWYTAHGENANFIARTVYKTTSVVRQ 62
Query: 68 LGTG-SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG S L SV+++ +F R+ L + +E++ NW++ K +PGNL
Sbjct: 63 LGRNDSTGLQSVTMTMTVFRQFLREALY-KLGKRIEIWASPNGRMNWKIAKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
E+ L + E PVI+A+ + + + +G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEEDLGSLAEA--APVILAVKISAKASEARAVGVCFADASVRELGVSEFLDNDSYSNFEA 179
Query: 184 ALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG KECL+ E K E ++ + CGV ++ER +F +D+ QDL RL+
Sbjct: 180 LLIQLGVKECLIHMEKADKEKDPELAKVKQIIDNCGVAISERPVADFGIKDIEQDLARLL 239
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ ++ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 240 KDERSATLLPQTDL----KLAMGSAAALIQYLGVLHDPSNFGQYQLYQHDLAQFMKLDAA 295
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D +K SLFGL+N C +G RLL WLKQPL+D NEI R +V+A
Sbjct: 296 ALKALNLMPGARDGSKTMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDKNEIEKRQQLVEA 354
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F +DT LRQ +++ HL+ I D+ RL ++++A L+ +V+ YQ+ IRLP +
Sbjct: 355 FANDTELRQTMQEEHLRSIPDLYRLAKRFQRKKANLEDVVRAYQAVIRLP-------GFL 407
Query: 416 GQFSSLIKERYLDPL-ESLTD-----DDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G ++ E Y DPL E+ T+ D L K +VET+VDLD L+N E++I +D
Sbjct: 408 GTLEGVMDETYRDPLDEAYTNKLRELSDSLVKLQEMVETTVDLDALDNHEFIIKPEFDDS 467
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L ++ + L ++ ASDL DK + L+ G R+T+ E IR+K
Sbjct: 468 LRIIRKRLDRLRSEMDREFADAASDLGQERDKKIFLENHKVHGWCMRLTRTEAGCIRQK- 526
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
+++ T+K+GV FT L+ ++ ++ + Y Q LVN V+ A ++S + + L
Sbjct: 527 -SRYQECSTQKNGVYFTTKTLQGYRREFDQLSQNYNRTQSGLVNEVVGVASSYSPVLEKL 585
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
+L+ LDV++S A + P Y RP I+P G +L +RHPC+E QD V FI ND
Sbjct: 586 GGVLAHLDVIVSLAHCSVHAPISYVRPTIHPRGEGQTVLVEARHPCLEMQDDVQFITNDV 645
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
+L R KS F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA
Sbjct: 646 ELTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSILARVGAS 705
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 706 DSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIG 765
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS---------------- 813
LFATHFHELTALA Q V N HV+AHI +S
Sbjct: 766 CSALFATHFHELTALA---------DQYPQVRNLHVTAHISGSSSAATAEKKKQKAEDEK 816
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV 873
R++T+LYKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT + D
Sbjct: 817 REVTLLYKVEPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTSAKQDGDSTPAAA 876
Query: 874 GSKRKRISDPNDMSRGAARAHQFLKEFSD-MPLETMDLKEALERVKRM 920
+ S D+ G+A + L + D + TM E + R+K M
Sbjct: 877 AAASPEYS-KRDVEEGSALLKEVLVRWKDEVRAGTMSKAEMVARLKEM 923
>gi|336273216|ref|XP_003351363.1| MSH2 protein [Sordaria macrospora k-hell]
gi|380092884|emb|CCC09637.1| putative MSH2 protein [Sordaria macrospora k-hell]
Length = 934
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/952 (41%), Positives = 562/952 (59%), Gaps = 68/952 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ FYK+LP A+R FDR D+YTAHG++ATFIA+T Y TT+ +RQ
Sbjct: 5 PELKVDDEH--GFIRFYKSLPQLGEEAIRIFDRGDWYTAHGDDATFIARTVYKTTSVIRQ 62
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG + L SV+++ +F R+ L + +E++ NW++VK +PGNL
Sbjct: 63 LGRSDHTGLPSVTMTVTVFRQFLREALF-KLGKRIEIWASPSGRMNWKIVKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L + + PVI+A+ + + + +G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDEL--GGQFEGAPVILAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLLPT---EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG KEC++ E K E LR + CGV ++ER EF +D+ QDL RL+
Sbjct: 180 LLIQLGVKECIITQDKGEKEKDPELAKLRQIIDNCGVAVSERPAGEFGIKDIEQDLSRLL 239
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ ++ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 240 KDERAATLLPQTDL----KLAMGSAAALIKYLGVLHDSSNFGQYQLYQHDLAQFMKLDAA 295
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D KN SL+GL+N C +G RLL WLKQPL++ EI R +V+A
Sbjct: 296 ALKALNLMPGARDGAKNMSLYGLLNH-CKTPVGSRLLSQWLKQPLMNAEEIEKRQQLVEA 354
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F +DT LRQ +++ HL+ I D+ RL ++ +A L+ +V+ YQ IR+P +
Sbjct: 355 FANDTELRQTMQEEHLRSIPDLYRLSKRFQRGKATLEDVVRAYQVVIRVP-------GFI 407
Query: 416 GQFSSLIKERYLDPLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G ++ E Y DPL+ + + D L K +VET+VDLD L+N E++I +D
Sbjct: 408 GTLEGVMDEAYRDPLDEVYTNKLRELSDSLVKLQEMVETTVDLDALDNHEFIIKPEFDDS 467
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L ++ + + L + + A DL +K + L+ G R+T+ E IR
Sbjct: 468 LRIIRKKLDRLRTDMDNEFADAADDLGQEREKKIFLENHKVHGWCMRLTRTEAGCIRN-- 525
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
++++ T+K+GV FT L+ L ++ ++ + Y Q LVN V+ A ++ + + L
Sbjct: 526 NSRYLECSTQKNGVYFTTKTLQTLRREFDQLSQNYNRTQSSLVNEVVGVASSYCPVLERL 585
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
A +L+ LDV++SFA + PT Y RP I+P G +L +RHPC+E QD V FI ND
Sbjct: 586 AAVLAHLDVIVSFAHCSVHAPTSYVRPKIHPRGTGRTVLTEARHPCMEVQDDVTFITNDV 645
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
L R S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA
Sbjct: 646 TLSREDSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSSAELTIFDSILARVGAS 705
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 706 DSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIG 765
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST-------------SRKL 816
LFATHFHELTALA + N V N HV+AHI T R++
Sbjct: 766 CFALFATHFHELTALADQYPN---------VKNLHVTAHISGTDADTDADSEKEKKKREV 816
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSK 876
T+LYKV PG CDQSFGIHVAE FPE VV +A+ KA ELEDFT + + V
Sbjct: 817 TLLYKVSPGVCDQSFGIHVAELVRFPEKVVRMAKRKADELEDFTSKHDEENGGGLGVQYS 876
Query: 877 RKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDA 928
++ D+ G+A L ++ D KE E V R+K+ ++KD
Sbjct: 877 KQ------DVEEGSALLKDVLVKWKDEVKSGQMSKE--EMVGRLKELVQKDG 920
>gi|296417699|ref|XP_002838490.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634429|emb|CAZ82681.1| unnamed protein product [Tuber melanosporum]
Length = 905
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/861 (43%), Positives = 538/861 (62%), Gaps = 41/861 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
PELK++ + A F+SF+ +LP +T A+R FDR DYYTAHG++A ++A+T Y TT+ +RQL
Sbjct: 5 PELKVEDESA--FISFFNSLP-ETDAIRLFDRNDYYTAHGQDAIYVAQTIYKTTSVIRQL 61
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-WRLVKSGTPGNLGSYED 127
G+ + L S ++S + R+ L + +E++ N W + K +PGNL ED
Sbjct: 62 GSSRNPLESCTLSVTAYRNFLRECLFQNRKR-VEIWGAKLRNKWGITKKASPGNLQDVED 120
Query: 128 VLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVA 187
FA ++ +P+I+A+ + + +G+ + D + R LG++EF D+ ++N ES ++
Sbjct: 121 D-FAG-QIDSSPIILAVRISVKGEERNVGVCFADASVRELGVSEFADNDLYSNFESLIIQ 178
Query: 188 LGCKECLLPT-EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEP 246
LG KEC++ + E K E LR + RCG+++T RK +EF +D+ QDL RL+ +
Sbjct: 179 LGVKECVVQSDEQNKDYELGKLRGIIERCGIVMTFRKASEFSVKDIEQDLSRLLTSEIAA 238
Query: 247 VRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLES 306
++A A AL+ Y +L+SD+ N+G Y + ++ L YM+LD++A++ALN++
Sbjct: 239 GVLPQVENKLAMAAASALIRYLQLMSDDLNFGQYRLYQHDLAQYMKLDASAVKALNLMPG 298
Query: 307 KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQD 366
D +KN SL+GL+N+ C +G RLL WLKQPL+ + EI R +V+AFV+DT LRQ
Sbjct: 299 PRDGSKNMSLYGLLNK-CKTAIGTRLLGQWLKQPLMSLEEIKKRQFLVEAFVEDTELRQT 357
Query: 367 LRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
+++ HLK I D+ RL +K A L+ +V+ YQ +IR+P S F ++ E
Sbjct: 358 MQEEHLKSIPDLYRLSKRFQKNLANLEDVVRAYQVAIRIPGFIST-------FEGVMDET 410
Query: 426 YLDPLESLTDDD------HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQES 479
Y DPL+ +L K LVET+VDLD L+N E++I + L ++++ +
Sbjct: 411 YKDPLDLRYTTKLREIYGNLEKLQELVETTVDLDALDNHEFIIKPEFSDDLKLVRDKLDK 470
Query: 480 LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR 539
L+R + + H + SDL VDK L ++ +G FR+T+ E IR + ++ + T
Sbjct: 471 LKRAMDTEHHRVGSDLGQEVDKKLFMENHKTYGWCFRLTRAEAGSIRNQ--KEYREISTM 528
Query: 540 KDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVL 599
K+GV FT T ++ L + K Y Q LV+ V+ A ++ + + LA +L+ LDV+
Sbjct: 529 KNGVFFTTTVMQDLKRDFDKSTYIYNKTQSGLVDEVVTVASSYCPVLEELAAVLAHLDVI 588
Query: 600 LSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQ 659
+SFA ++ P+PY +P ++ G+ IL+ +RHPC+E QD + FI ND L RG S F
Sbjct: 589 VSFAHVSVHAPSPYVKPKMHARGEGNTILKEARHPCMEMQDDIQFITNDVSLCRGSSEFL 648
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
IITGPNMGGKST+IRQ+GV LMAQVG FVPC A +++ DCI ARVGA D Q++GVSTF
Sbjct: 649 IITGPNMGGKSTYIRQIGVIALMAQVGCFVPCSEAELTIFDCILARVGASDSQMKGVSTF 708
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EIR +FATHFH
Sbjct: 709 MAEMLETSTILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIRCFAMFATHFH 768
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
ELTAL E + V N HV AH+ T+LYKV+ G DQSFGIHVAE
Sbjct: 769 ELTALVDEYPS---------VKNLHVIAHV-------TLLYKVDEGVSDQSFGIHVAELV 812
Query: 840 NFPESVVTLAREKAAELEDFT 860
FP+ V+ +A+ KA ELEDFT
Sbjct: 813 RFPQKVINMAKRKADELEDFT 833
>gi|171679627|ref|XP_001904760.1| hypothetical protein [Podospora anserina S mat+]
gi|170939439|emb|CAP64667.1| unnamed protein product [Podospora anserina S mat+]
Length = 925
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/929 (42%), Positives = 559/929 (60%), Gaps = 50/929 (5%)
Query: 20 GFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD-ALSS 77
GF+ +YK+LP D +R FDR D+YTAHGE+A FIA+T Y TT+ +RQLG L S
Sbjct: 20 GFIRYYKSLPKVDEDVIRIFDRGDWYTAHGEDANFIARTVYKTTSVVRQLGKNDHTGLPS 79
Query: 78 VSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGSYEDVLFANNEM 135
V+++ +F R+ L + +E+Y NW++VK +PGNL ED L +
Sbjct: 80 VTMTVTVFRQFLREALY-KLGKRIEIYASPNGRMNWKIVKQASPGNLQDVEDEL--GGQF 136
Query: 136 QDTPVIVALFPNFREN-GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
+ PVI+A+ + + G T+G+ + D + R LG++EFLD+ ++N ES ++ LG KECL
Sbjct: 137 EGAPVILAVKITVKASEGRTVGVCFADASVRELGVSEFLDNDLYSNFESLVIQLGVKECL 196
Query: 195 L---PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR----GSVEPV 247
+ E K E LR L CG+ ++ER EF T+D+ QDL RL++ ++ P
Sbjct: 197 MQIDKAEKNKDPELAKLRQILDSCGIAVSERPAGEFGTKDIEQDLARLLKDERSATLLPQ 256
Query: 248 RDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK 307
DL ++A G+ AL+ Y +L D SN+G+Y + ++ L +M+LD+AA++ALN++
Sbjct: 257 TDL----KLAMGSAAALIKYLGVLHDPSNFGHYQLYQHDLAQFMKLDAAALKALNLMPGA 312
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
D K SL+GL+N C +G RLL WLKQPL+D EI R +V+ FV+DT LRQ +
Sbjct: 313 RDGAKTMSLYGLLNH-CKTPVGSRLLSQWLKQPLMDKAEIEKRQQLVEVFVNDTELRQTM 371
Query: 368 RQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFS-SLIKER 425
++ HL+ I D+ RL ++++A L+ +V+ YQ I LP L+ + + + E
Sbjct: 372 QEEHLRSIPDLYRLSKRFQRKKATLEDVVRAYQVVILLPGFLCTLEGVMDEAARDPLDEA 431
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
Y + L L++ L K +VET+VDLD LEN E++I +D GL ++ + L +
Sbjct: 432 YTNKLRELSNS--LVKLQEMVETTVDLDALENHEFIIKPDFDDGLRIIRKRLDKLRSDMD 489
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+ A+DLD DK + L+ G R+T+ E IR K +++ T+K+GV F
Sbjct: 490 KEFSEAANDLDQERDKKIFLENHKVHGWCMRLTRTEASCIRNK--SRYQECSTQKNGVYF 547
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
T L+ ++ ++ + Y Q LVN V+ A ++ + + L +L+ LDV++S A
Sbjct: 548 TTKTLQAYRREFDQLSQNYNRTQSGLVNEVVGVAASYCPVLEKLGGVLAHLDVIVSLAHC 607
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPN 665
A + P Y RP I+P G IL G+RHPC+E QD V FI ND L R S F IITGPN
Sbjct: 608 AENAPVSYARPKIHPRGQGQTILTGARHPCMEMQDDVTFITNDVSLTRDSSSFLIITGPN 667
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
MGGKST+IRQ+GV LMAQ+GSFVPC+ A +++ D I ARVGA D QL+GVSTFM EMLE
Sbjct: 668 MGGKSTYIRQIGVIALMAQIGSFVPCESAELTIFDSILARVGASDSQLKGVSTFMAEMLE 727
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
TA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH++++I LFATHFHELTALA
Sbjct: 728 TANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIIQQIGCFALFATHFHELTALA 787
Query: 786 HENANEFNTKQMVGVANYHVSAHIDS---TSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
+ V N HV+AHI S R++T+LYK+ PG CDQSFGIHVAE FP
Sbjct: 788 EKYPQ---------VQNLHVTAHITSDRDVKREVTLLYKLAPGICDQSFGIHVAELVRFP 838
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
+ VV +A+ KA ELEDFT +K E GS + D+ G+A L ++ D
Sbjct: 839 DKVVRMAKRKADELEDFT--------SKHEAGSVK---YGKGDVEEGSALLKDVLVKWKD 887
Query: 903 -MPLETMDLKEALERVKRMKDDLEKDAGD 930
+ M +E +ER++ + + E+ G+
Sbjct: 888 QVKGGGMTKQEMVERLRELVRNDERLEGN 916
>gi|345568246|gb|EGX51143.1| hypothetical protein AOL_s00054g519 [Arthrobotrys oligospora ATCC
24927]
Length = 926
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/869 (41%), Positives = 541/869 (62%), Gaps = 42/869 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+S + LP D+ +R F+R D+YT HGE+A F+A+ Y T + L+
Sbjct: 5 PELKVDDEN--GFISTFNRLPAKDSNTIRVFERSDFYTVHGEDAQFVAQHVYKTNSVLKS 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELY--EGSGSNWRLVKSGTPGNLGSY 125
LG G L S ++S +F R+ L ++ +E++ + ++W ++K +PGNL
Sbjct: 63 LGGGKSTLQSCTLSVTVFRNFLREALFQQ-GKKIEIWGSQKGRNSWEIIKQASPGNLQDV 121
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESAL 185
E+ + ++ +P+++A+ + + + +G+ + D + R LG++EF+D+ ++N ES L
Sbjct: 122 EEDIAG--QLDSSPIVLAVKVSAKVDQRVVGVAFADASVRELGVSEFVDNDLYSNFESLL 179
Query: 186 VALGCKECLLPT-EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSV 244
+ LG KEC++ T ++ K E LR + RCGV++T++K ++F +D+ QDL RL++ V
Sbjct: 180 IQLGVKECIIQTNDSKKDVENTKLRSIIDRCGVVITDKKSSDFAGKDVEQDLTRLLKDDV 239
Query: 245 EPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL 304
+ ++A A AL+ Y L+SD+ N+G Y + ++ L YM+LD++A++ALN++
Sbjct: 240 AVGSLPQADLKVAMCAASALIRYLGLMSDQLNFGQYRLYQHDLAEYMKLDASALKALNLM 299
Query: 305 ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALR 364
D +KN S++GL+N+ C +G RLL WLKQPL+ + EI R +V+AFV+DT LR
Sbjct: 300 PGPRDGSKNMSVYGLLNK-CKTAVGTRLLAQWLKQPLMSLEEIEKRHLLVEAFVEDTELR 358
Query: 365 QDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
Q +++ HL+ + D+ RL ++ A L+ +V+ Y I+LP + G ++
Sbjct: 359 QTMQEEHLRSVPDLYRLAKKFQRNMANLEDVVRAYMLVIKLP-------GFIGTLEGVMD 411
Query: 424 ERYLDPLESLTDDD------HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
E+Y DPL+ + L K +VET+VDL+ LEN EY+I +D L ++ +
Sbjct: 412 EKYKDPLDEVYTRKLREFQVQLAKLEEMVETTVDLEALENHEYIIKPEFDDSLKTIRTKL 471
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
+SL+R + H+ ++DL +DK L L+ G FR+T+ E IR + +
Sbjct: 472 DSLQRDLGKEHRSVSNDLGQEMDKKLFLENHRVHGWCFRLTRNEAGSIRN--NRHYREIS 529
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K+GV FT KL L + + + Y Q LV V+ A ++ +F++LA +L+ LD
Sbjct: 530 TQKNGVYFTTDKLSSLRRDFDQYTQNYNRTQTGLVQEVVNVASSYCPVFENLAAVLAHLD 589
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
V++SFA ++ P+PY RP ++P G+ IL+ +RHPC+E QD + FI ND +LIR S
Sbjct: 590 VIVSFAHVSVHAPSPYVRPTMHPRGEGNTILKEARHPCMEMQDDIQFITNDVELIRDSSE 649
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D QL+GVS
Sbjct: 650 FLIITGPNMGGKSTYIRQIGVIALMAQAGCFVPCSEAELTIFDCILARVGASDSQLKGVS 709
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++V++I+ +FATH
Sbjct: 710 TFMAEMLETATILKSATRESLIIIDELGRGTSTYDGFGLAWAISEYIVKQIKCFAMFATH 769
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS-------RKLTMLYKVEPGACDQS 830
FHELTAL E V N HV AH+ + R++T+LYKV G CDQS
Sbjct: 770 FHELTALVEEYPV---------VKNLHVVAHVGDKNGNDGERKREVTLLYKVSEGVCDQS 820
Query: 831 FGIHVAEFANFPESVVTLAREKAAELEDF 859
FGIHVAE FP+ VV +A+ KA ELEDF
Sbjct: 821 FGIHVAELVRFPQKVVNMAKRKADELEDF 849
>gi|115396094|ref|XP_001213686.1| DNA mismatch repair protein msh-2 [Aspergillus terreus NIH2624]
gi|114193255|gb|EAU34955.1| DNA mismatch repair protein msh-2 [Aspergillus terreus NIH2624]
Length = 1349
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/887 (42%), Positives = 549/887 (61%), Gaps = 47/887 (5%)
Query: 2 DDEQNKLPELKLDAKQARGFLSFYKTLPNDTR--AVRFFDRRDYYTAHGENATFIAKTYY 59
D + + E +++ GF+ FY++L +D+ +R FDR D+Y+AHG A FIA+T Y
Sbjct: 407 DSLRTPISEKEVEVDDEVGFIRFYRSLASDSSDDTIRVFDRGDWYSAHGAEAEFIARTVY 466
Query: 60 HTTTALRQLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVK 115
TT+ LR LG + + L SV++S +F R+ L R + +E++ G+ +W+LVK
Sbjct: 467 KTTSVLRNLGRSETGGLPSVTLSVTVFRNFLREALF-RLNKRIEIWGNVGTGRGHWKLVK 525
Query: 116 SGTPGNLGSYEDVL--FANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEF 172
+PGNL ED L M+ P+I+A+ + + + ++G+ + D + R LG++EF
Sbjct: 526 QASPGNLQDVEDELGSVGGLTMESAPIILAVKISAKASEARSVGVCFADASVRELGVSEF 585
Query: 173 LDDSHFTNVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRD 231
LD+ ++N ES ++ LG KECL+ + K E +R CG+ ++ER +F +D
Sbjct: 586 LDNDVYSNFESLVIQLGVKECLVQMDTNRKDVELGKIRAIADTCGIAISERPVADFGIKD 645
Query: 232 LVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
+ QDL RL+R + ++A G+ AL+ Y ++SD +N+G Y + ++ L +M
Sbjct: 646 IEQDLTRLLRAEHSAATLPQTELKLAMGSAAALIKYLGVMSDPTNFGQYQLYQHDLSQFM 705
Query: 292 RLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARL 351
+LD++A+RALN++ D +++ SLFGL+N C +G RLL WLKQPL+D+ EI R
Sbjct: 706 KLDASALRALNLMPGPRDGSRSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLGEIEKRQ 764
Query: 352 DIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
+V+AFV++T LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++
Sbjct: 765 QLVEAFVENTELRQTMQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVAS 824
Query: 411 LQQYEGQFSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
L+ +++ E+Y PLE+ + D L K +VET+VDLD LEN E++I
Sbjct: 825 LE-------NVMDEQYQTPLETEYTSKLRSHSDSLAKLEEMVETTVDLDALENHEFIIKP 877
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
+D L ++ + + L ++ H++ + DL VDK L L+ G FR+T+ E
Sbjct: 878 EFDESLRIIRKKLDKLRHDMNVEHRRVSRDLGQEVDKKLFLENHRVHGWCFRLTRNEAGC 937
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
IR ++ T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++
Sbjct: 938 IRN--AKEYQECSTQKNGVYFTTSTMQTLRREHDQLSSNYNRTQTGLVHEVVNVAASYCP 995
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF 644
+ + LA +L+ LDV++SFA + P+ Y RP I+P G+ +L+ +RHPC+E QD ++F
Sbjct: 996 VLEQLAGVLAHLDVIVSFAHASVHAPSSYVRPKIHPRGTGNTVLKEARHPCMEMQDDISF 1055
Query: 645 IPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFA 704
I ND LIR +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI A
Sbjct: 1056 ITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDCILA 1115
Query: 705 RVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL 764
RVGA D QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+
Sbjct: 1116 RVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHI 1175
Query: 765 VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-DSTS---------- 813
V EIR LFATHFHELTALA V N HV A I D TS
Sbjct: 1176 VTEIRCFGLFATHFHELTALADRYPK--------SVKNLHVVAFIGDGTSGDNEENKSKQ 1227
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
+T+LY+VEPG CDQSFGIHVAE FP+ VV +AR+KA ELEDFT
Sbjct: 1228 NHVTLLYRVEPGICDQSFGIHVAELVRFPDKVVNMARQKAEELEDFT 1274
>gi|402219240|gb|EJT99314.1| DNA mismatch repair protein [Dacryopinax sp. DJM-731 SS1]
Length = 951
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/878 (42%), Positives = 559/878 (63%), Gaps = 37/878 (4%)
Query: 20 GFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV 78
GF F++ +P T +R FDR D+++ HGE+A ++A+ YHT T ++ G S L SV
Sbjct: 32 GFCQFFERMPKVATGTIRLFDRGDFFSVHGEDAKYVAQHVYHTNTVIKYFGKKSGGLPSV 91
Query: 79 SVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGSYEDVLFANNE 134
++S+ + + R+ L + +E+++G G N++L K +PGNL + E++LFA+ +
Sbjct: 92 TLSQTLAKVFLREALTAK-QLRVEIWQGEGGKKNMNFKLAKQASPGNLQAVEELLFADRD 150
Query: 135 MQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
+ +P+++A+ ++ +G+ Y D + R +G+++F D+ F+N+ES ++ LG KECL
Sbjct: 151 ILSSPIVMAIKLATQDGARMVGVAYADASIREIGVSQFPDNDLFSNIESLVIQLGVKECL 210
Query: 195 LPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSG 253
+ ++ + + LR L RC V+LTER+ EF R++ QDL R+++ V+
Sbjct: 211 IQSDEKRHDLDLAKLRGVLERCNVVLTERRTNEFAVRNVEQDLRRILKEETAAVQLPEFD 270
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD--AN 311
+ A A ALLSY LL DESNYG Y +R + L YMRLD++A+RALN++ D AN
Sbjct: 271 LKTAMAATSALLSYLSLLMDESNYGQYTLRHHDLSQYMRLDASALRALNLMPGPQDGAAN 330
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-H 370
KN S+FGL+NR C G RLL WLKQPL++++ I R D+V+A V+D+ R+ L+ +
Sbjct: 331 KNASVFGLLNR-CKTSQGTRLLGSWLKQPLVNLHAIKRRQDLVEAMVEDSNTRRTLQDDY 389
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE---GQFSSLIKERYL 427
+K + D+ R+ +K A L+ +V++YQ+ ++LP + L+ E + L+ ++++
Sbjct: 390 IKSMPDMRRISKRFQKGNANLEDVVRVYQAILKLPGLIETLEGIETGNDEHKELVTDQWV 449
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
+ L+ L K +V ++DL++L+N Y I +D L + E + ++ +
Sbjct: 450 NNLKEYLSS--LTKMEEMVVHTLDLEELQNHNYAIKPDFDDDLKHISEEICVVRDKLDAE 507
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
H++ + +LD+ +DK L L+ + +G+ R++K + I +I L T+K GV FT
Sbjct: 508 HRRVSGELDMDMDKKLHLENNSVYGYCLRLSKNDSKAIHN--VRGYIELSTQKAGVYFTT 565
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+K+ Y +++E+Y+ Q LV V+ A T++ + + L +++ +DV+LSFA ++
Sbjct: 566 KHMKEASTDYAELIEKYERMQSGLVKEVVNIASTYTPVLEMLDNLIAHMDVILSFAHVSV 625
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMG 667
+ P PY +P ++ G+++++ +RHPC+E QD VNFIPND ++I+G S FQIITGPNMG
Sbjct: 626 NAPIPYVKPTMSEKGTGNVVVKEARHPCLEVQDEVNFIPNDHEMIKGMSEFQIITGPNMG 685
Query: 668 GKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
GKST+IRQ+GV LMAQ G FVPC A + V D I ARVGAGD QL+GVSTFM EMLETA
Sbjct: 686 GKSTYIRQIGVIALMAQTGCFVPCAEAELPVFDSILARVGAGDSQLKGVSTFMAEMLETA 745
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHE 787
+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A LFATHFHELTALA E
Sbjct: 746 TILKSATKDSLIIIDELGRGTSTYDGFGLAWAISENIATQIHAFCLFATHFHELTALAQE 805
Query: 788 NANEFNTKQMVGVANYHVSAHI-----DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
++ V N HV AH+ + R +T+LYKVEPG CDQSFGIHVAE ANFP
Sbjct: 806 VSH---------VKNLHVVAHVTQRGSSNHDRDITLLYKVEPGICDQSFGIHVAELANFP 856
Query: 843 ESVVTLAREKAAELEDFT----PSAVISDDAKIEVGSK 876
ESVV LA+ KA ELEDFT P + IS + +I+ G++
Sbjct: 857 ESVVKLAKRKADELEDFTSAGEPVSTISKE-QIDEGTQ 893
>gi|330930898|ref|XP_003303190.1| hypothetical protein PTT_15308 [Pyrenophora teres f. teres 0-1]
gi|311320956|gb|EFQ88715.1| hypothetical protein PTT_15308 [Pyrenophora teres f. teres 0-1]
Length = 929
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/886 (42%), Positives = 547/886 (61%), Gaps = 66/886 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PE+K + GF F++ L VR FDR DYY+AHGE+A FIA T Y TT +R+
Sbjct: 5 PEIK--EEDESGFCKFFRNLSEKHDETVRIFDRGDYYSAHGEDAKFIANTVYKTTAVIRK 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGSY 125
LG L SV+++ +F RD L R +E+++ +G +W++VK +PGNL
Sbjct: 63 LGR-DPGLESVTMTITVFRNFLRDALF-RLGKRIEIWQSTGKRMDWKVVKQASPGNLQDL 120
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
ED L ++++ P+I+A+ + + + +G+ + D + R LG+ EFLD+ ++N ES
Sbjct: 121 EDDL--GGQIENAPIILAVKVSAKASEARNVGVCFADASVRELGVTEFLDNDLYSNFESL 178
Query: 185 LVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
L+ LG KECL+ ++ K E LR CG + ER + +F T+D+ QDL RL++
Sbjct: 179 LIQLGVKECLIQLDSSKKDVELSKLRTIADNCGCAVAERAQADFGTKDIDQDLPRLLKDE 238
Query: 242 ---GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
GS+ P+ DL +A G+ L+ Y ++SD SN+G Y + ++ L YM+LD+AA+
Sbjct: 239 RAAGSL-PLTDL----SLAMGSAACLIRYLGVMSDSSNFGQYQLYQHDLSQYMKLDAAAL 293
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
+ALN++ D KN SL+GL+N C G RLL WLKQPL++V EI R +V+AFV
Sbjct: 294 KALNLMPGPRDGAKNMSLYGLLNH-CKTPTGSRLLAQWLKQPLMNVEEIERRQQLVEAFV 352
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
+DT LRQ +++ HL+ I D+ RL +++ A L+ +V+ YQ IRLP S+L+
Sbjct: 353 NDTELRQTMQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSSLE----- 407
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIA-------LVETSVDLDQLENGEYMISSSYDTGL 470
++I E+Y +PL++ D L ++ A +VET+VDL+ L+N E++I +D L
Sbjct: 408 --AVIDEQYKEPLDA-EYTDKLRQYTAAFAGLQDMVETTVDLEALDNHEFIIKPEFDESL 464
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
++ + L+R++ S H + DL+ +K L L+ G FR+T+ E IR+K
Sbjct: 465 KVIRKRLDKLKREMESEHMRVGDDLNQDTEKKLFLENHKVNGWCFRLTRNEAGCIRQK-- 522
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
Q+ + T+K+GV FT L++ ++ ++ E Y Q LVN V+ A ++ + + LA
Sbjct: 523 KQYQEISTQKNGVYFTTNTLQEKRREFDQLSENYNRTQSGLVNEVVSVASSYVPVVEKLA 582
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L+ LDV+++FA ++ PT YTRP ++P G+ +L+ +RHPC+E QD ++FI ND
Sbjct: 583 AVLAHLDVIVAFAHVSVHAPTSYTRPTMHPRGTGNTVLKEARHPCMEMQDDISFITNDVS 642
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
LIR +S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D
Sbjct: 643 LIRNESEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASD 702
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
Q++GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++V+EI A
Sbjct: 703 SQIKGVSTFMAEMLETANILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGA 762
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS----------------- 813
LFATHFHELTAL V N HV AHI +
Sbjct: 763 FALFATHFHELTALVDTYPQ---------VQNLHVVAHISEGNTPANEDGDVDMDAVEKK 813
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
R++T+LYKVEPG DQSFGIHVAE FP+ V+ +A+ KA ELEDF
Sbjct: 814 REVTLLYKVEPGFSDQSFGIHVAELVRFPQKVINMAKRKADELEDF 859
>gi|198420769|ref|XP_002126892.1| PREDICTED: similar to DNA mismatch repair protein MSH2 [Ciona
intestinalis]
Length = 944
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/904 (42%), Positives = 560/904 (61%), Gaps = 50/904 (5%)
Query: 20 GFLSFYKTLPNDTRAV-RFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV 78
GF F +LP A R FD ++Y++H ++A AK + ++TA+++LG + +V
Sbjct: 17 GFFKFCDSLPEKADATYRVFDHGEFYSSHSKDADLAAKHIFKSSTAVKELGKKDAKVPTV 76
Query: 79 SVSKNMFETIARDLLLERTDHTLELY-EGSGSNWRLVKSGTPGNLGSYEDVLFANNEM-- 135
+S+ FE++ARDLLL + LE+Y + S W L +PGNL ED+LF N ++
Sbjct: 77 FLSQLNFESLARDLLL-VMQYRLEVYRQLSNRKWELAYKASPGNLNEVEDILFKNVDIGD 135
Query: 136 QDTPVIVALFPNFRENG-CTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
Q + ++++ G T+GL YVD + AEF D+ HF+N+ESA++ LG KEC+
Sbjct: 136 QTSSAVISVKYTLAAGGQSTVGLAYVDTRSCEVMYAEFSDNDHFSNLESAIIQLGPKECI 195
Query: 195 LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVE-------PV 247
+P + S E L + + R G+++TER K++F T+DL QDL RL++ + PV
Sbjct: 196 VP-KLDTSHEASKLSEVIKRSGLLITERPKSDFSTKDLAQDLKRLIKTKKKQSDQDEVPV 254
Query: 248 -RDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLES 306
S +A +L +L+ Y EL+S E N+G + IRK+ L YM+LDSAA ALN+
Sbjct: 255 GASWTSDHPLASSSLSSLIRYLELMSKEENFGEFRIRKFELSQYMKLDSAAYSALNLFPE 314
Query: 307 KT------DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
+T ++ SL+GL+N C G+RLL W+KQPL+DVN + RL IV+AFVD
Sbjct: 315 RTAQGVAQNSKPVDSLYGLLN-YCQTVQGQRLLSRWIKQPLIDVNILEERLSIVEAFVDC 373
Query: 361 TALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFS 419
+ LR+ L +HLK++ D +RL +++A LQ ++YQ+ ++PY+ ++ ++
Sbjct: 374 SELRRSLVDEHLKKLPDFDRLSKKFHRKKATLQDSYRVYQAIKQMPYVCESIGRHAEALE 433
Query: 420 S---LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
+ L++E +L+P+ L+ D KF ++ET++D +E E+M+ +D L L+ +
Sbjct: 434 NNYNLLRETFLNPIHQLSLD--FEKFTEMLETTLDFKLIEKHEFMVKCDFDPELKRLRVK 491
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ +E +++ Q A L L K++KL+ QFG+VFR+T KEE +R+ +F L
Sbjct: 492 MDDIEEEMNESFTQAADQLGLEKGKSIKLELAPQFGYVFRVTCKEEKSLRQ--NKKFTTL 549
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
+T K GV+F NT+L++L D YQ Y+ Q +V ++ A ++E +SL ++++L
Sbjct: 550 DTNKAGVRFVNTQLQQLSDDYQDCRAAYEAQQDAVVMEIMTIACGYAEPMRSLGDVIAKL 609
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGD--IILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
DVLLSFA A + PTPY RP + P G I L+ RHPCVE QD V+FIPND L +
Sbjct: 610 DVLLSFAQAAVTAPTPYVRPVLQPLGTGSNLIKLDQCRHPCVERQDDVSFIPNDLLLKKN 669
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
+ F I+TGPNMGGKST+IRQ+GV +LMAQ+G FVPC A++++ D I ARVGAGDCQ +
Sbjct: 670 EHNFIIVTGPNMGGKSTYIRQIGVAVLMAQIGCFVPCGGATVTLVDAILARVGAGDCQAQ 729
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
GVSTFM EMLET+SIL+ AT SLIIIDELGRGTSTYDGFGLAWAI H+ EIRA LF
Sbjct: 730 GVSTFMAEMLETSSILRSATSNSLIIIDELGRGTSTYDGFGLAWAISRHVALEIRAACLF 789
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR---KLTMLYKVEPGACDQSF 831
ATHFHE+T+LA E + NYHV+A S +TMLY+V+PG+CD+SF
Sbjct: 790 ATHFHEMTSLADE---------VTSAVNYHVTALTSSNENVDSHITMLYQVKPGSCDKSF 840
Query: 832 GIHVAEFANFPESVVTLAREKAAELED--FTPSAVISDDAKIEVGSKRKRISDPNDMSRG 889
GIHVAE +FP SV+ A+ KAAELED T ++ DD + +RK SD ++ R
Sbjct: 841 GIHVAECVDFPLSVINAAKRKAAELEDCYVTDTSKEDDDGR----KRRKTKSDGEEIVRD 896
Query: 890 AARA 893
RA
Sbjct: 897 FLRA 900
>gi|255934164|ref|XP_002558363.1| Pc12g15640 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582982|emb|CAP81191.1| Pc12g15640 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 943
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/952 (40%), Positives = 567/952 (59%), Gaps = 60/952 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK+D + GF+ FY++LP ++ +R FDR D+Y++HG +A FIA+T Y TT+ LR
Sbjct: 5 PDLKVDDEV--GFIGFYRSLPTADNNETIRVFDRGDWYSSHGADAEFIARTVYKTTSVLR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPGNL 122
LG + + L SV++S +F R+ L R + +E++ +GS NW+L K +PGNL
Sbjct: 63 NLGRSETGGLPSVTMSVTVFRNFLREALF-RLNKRIEIFASAGSGKSNWKLAKQASPGNL 121
Query: 123 GSYEDVLFANN--EMQDTPVIVALFPNFRE-NGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L + M P+I+A+ + R +G+ + D + R LG++EFLD+ ++
Sbjct: 122 QDVEEELGSVGALSMDSAPIILAVKISARAAEARNVGVCFADASVRELGVSEFLDNDIYS 181
Query: 180 NVESALVALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ + A K E +R CG+ ++ER +F +D+ QDL R
Sbjct: 182 NFESLVIQLGVKECLVTMDVARKDVELAKIRAIADSCGIAISERPVADFGVKDIEQDLTR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L+R + ++A GA AL+ Y +L+D +N+G Y + ++ L YM+LD++A+
Sbjct: 242 LLRDERSAGTLPQTELKLAMGAASALIKYLNVLTDPTNFGQYQLYQHDLSQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D K+ SLFGL+N C +G RLL WLKQPL+D+ I R +V+AFV
Sbjct: 302 RALNLMPGPRDGAKSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLAAIEQRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
+T LRQ +++ HL+ I D+ RL ++++A L+ +V+ YQ SIRLP SAL
Sbjct: 361 VNTELRQTMQEEHLRAIPDLYRLAKRFQRKQANLEDVVRAYQVSIRLPGFVSAL------ 414
Query: 418 FSSLIKERYLDPLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
S ++ E+Y PLE+ D L +VET+VDL LEN E++I +D L
Sbjct: 415 -SDVMDEQYQTPLEAEYTSKLRGYSDSLAMLEEMVETTVDLAALENHEFIIKPEFDDSLR 473
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + + L + H++ + DL ++K L ++ G FR+T+ E IR K
Sbjct: 474 VIRKKLDKLRYDMDMEHQRVSKDLHQDMEKKLFMENHRVHGWCFRLTRNEAGCIRNK--R 531
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
++ T+K+GV FT ++ L ++ ++ Y Q LVN V+ A ++ + + LA
Sbjct: 532 EYQECSTQKNGVYFTTANMQSLRREHDQLSSNYNRTQTGLVNEVVNVAASYCPVLEQLAG 591
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LDV++SFA + P+ Y RP ++P G+ +L+ +RHPC+E QD ++FI ND L
Sbjct: 592 VLAHLDVIVSFAHASMHAPSGYVRPKMHPRGTGNTVLKEARHPCMEMQDDISFITNDVSL 651
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
IR +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D
Sbjct: 652 IRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCTEAELTIFDCILARVGASDS 711
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR
Sbjct: 712 QLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCF 771
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS-------------RKLTM 818
LFATHFHELTALA V N HV A I + + R++T+
Sbjct: 772 GLFATHFHELTALADRYPK--------AVKNLHVVAFIGNGNEGESESETEEKKKRQVTL 823
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS--- 875
LY+VEPG CDQSFGIHVAE FP+ VV +AR+KA ELEDFT + A+ S
Sbjct: 824 LYRVEPGICDQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSATTEDGQAQPSAPSLDK 883
Query: 876 -KRKRISDPNDMSRGAARAHQFLKEFSDMPLE-----TMDLKEALERVKRMK 921
++ + + N + +G + E DM E DL +A E+++ K
Sbjct: 884 YSQEEVEEGNALLKGMLLKWKTATEGKDMTAEQKRQVMRDLAQADEKLQANK 935
>gi|299739901|ref|XP_001840335.2| DNA mismatch repair protein MSH2 [Coprinopsis cinerea okayama7#130]
gi|298403994|gb|EAU81391.2| DNA mismatch repair protein MSH2 [Coprinopsis cinerea okayama7#130]
Length = 962
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/879 (41%), Positives = 549/879 (62%), Gaps = 56/879 (6%)
Query: 21 FLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD-ALS 76
F++++ LP DT +R F R D+Y A+G +A ++A+ +HT + ++ LG G L
Sbjct: 19 FITYFHNLPKKSPDTGTLRLFSREDWYAAYGPDALYVAQNVFHTNSVIKYLGAGGKLGLP 78
Query: 77 SVSVSKNMFETIARDLLLERTDHTLELYE---GSG---SNWRLVKSGTPGNLGSYEDVLF 130
SV++ + + RD L + +E+Y GSG + ++L K +PGNL + ED+LF
Sbjct: 79 SVTLKTSQAHALLRDALTSK-QLRVEIYAPETGSGKKGTTFKLDKEASPGNLQAVEDLLF 137
Query: 131 ANNEMQDTPVIVAL----FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALV 186
+N+++ P+++A+ P R +G+ + D + R LG+A+F D+ F+N+ES ++
Sbjct: 138 SNSDVISAPIVMAVKLATAPMDRARLRAVGVAFADTSGRELGVADFTDNDLFSNLESLVI 197
Query: 187 ALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
L KE ++PT + + L+ L RC V++TERK +EF ++L DL L++
Sbjct: 198 QLSVKEAIIPTGTASGTTDRDIDLNKLKAVLDRCNVIITERKPSEFNVKNLSSDLPLLLK 257
Query: 242 GSV------EPVRDLVSGFEI--APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
S + ++ + APGAL AL++Y LL D+SN+G Y IR + L +MRL
Sbjct: 258 PSAMQSSSSADIAAVIPQLSLPNAPGALSALINYLALLGDQSNHGAYSIRTHDLSQFMRL 317
Query: 294 DSAAMRALNVLES--KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARL 351
D++A+RALN++E K ++K ++FG++NR C G RLL WLKQPL++++EI+ R
Sbjct: 318 DASALRALNLVEGPGKLGSSKTTTIFGILNR-CKTAQGGRLLGTWLKQPLVNLHEIHKRQ 376
Query: 352 DIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
++V+ FVDDT R+ LR ++LK + D+ R+ +K A L+ +V++YQ ++LP +
Sbjct: 377 NLVEIFVDDTNSRRTLRDEYLKFMPDLNRIYKRFQKGVATLEDVVRVYQVVLKLPGMVET 436
Query: 411 LQQYEGQFSS---LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYD 467
L+ + + + L+KE + + L K+ +VE ++DLD+L+N Y+I YD
Sbjct: 437 LESVQAEDEAKLELVKEVFATTYKEAAGS--LAKYGEMVEETIDLDELDNHNYVIKPDYD 494
Query: 468 TGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRK 527
L L + + + + + H++ + D+ +DK L L+ +G+ FR+TK + K+
Sbjct: 495 AKLQELAEQLKDVRDGLDAEHRKVGNATDMELDKKLHLENNATYGYCFRLTKADAKKVD- 553
Query: 528 KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFK 587
++I T K GV F KLK+L Q++++ Y Q +V +V+Q A T+ +F+
Sbjct: 554 --MDKYIEYATTKSGVHFATRKLKELAVQFKELSALYSKTQTGVVKQVVQIAATYGPVFE 611
Query: 588 SLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPN 647
+L +L+ LDV+LSFA++A + PTPY +P + D G +ILE +RHPC+E Q+ +NFIPN
Sbjct: 612 NLNDILAHLDVILSFAEVAVNAPTPYVKPKVVQKDSGSLILEEARHPCLEVQEGINFIPN 671
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
+ ++I+ KS FQIITGPNMGGKST+IRQVGV LMAQVGSFVPC A + V D I RVG
Sbjct: 672 NVEMIKNKSEFQIITGPNMGGKSTYIRQVGVIALMAQVGSFVPCSEAELPVFDSILCRVG 731
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
AGD QL+GVSTFM EMLETA+IL+ AT SLIIIDELGRGTSTYDGFGLAWAI EH+ E
Sbjct: 732 AGDSQLKGVSTFMAEMLETATILRSATKNSLIIIDELGRGTSTYDGFGLAWAISEHIASE 791
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID-------STSRKLTMLY 820
I A LFATHFHELT L +Q+ V N+HV AH++ ++ + +LY
Sbjct: 792 IHAFCLFATHFHELTNL---------DQQIPHVKNFHVVAHVNKDAGGESASKDNIVLLY 842
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
+VEPG DQSFGIHVAE ANFPE VV LAR+ A ELE+F
Sbjct: 843 RVEPGVSDQSFGIHVAELANFPEDVVKLARKNAEELEEF 881
>gi|425768288|gb|EKV06815.1| DNA mismatch repair protein Msh2, putative [Penicillium digitatum
Pd1]
gi|425770369|gb|EKV08842.1| DNA mismatch repair protein Msh2, putative [Penicillium digitatum
PHI26]
Length = 943
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/892 (41%), Positives = 546/892 (61%), Gaps = 41/892 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK+D + GF+ FY+ LP ++ +R FDR D+Y++HG +A FIA+T Y TT+ LR
Sbjct: 5 PDLKVDDEV--GFIGFYRGLPAPDNNETIRVFDRGDWYSSHGADAEFIARTVYKTTSVLR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPGNL 122
LG + + L SV++S +F R+ L R + +E++ +GS NW+L K +PGNL
Sbjct: 63 NLGRSETGGLPSVTMSVTVFRNFLREALF-RLNKRIEIFASAGSGKSNWKLAKQASPGNL 121
Query: 123 GSYEDVL--FANNEMQDTPVIVALFPNFRE-NGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L M P+I+A+ + R +G+ + D + R LG++EFLD+ ++
Sbjct: 122 QDVEEELGNVGALSMDSAPIILAVKISARAAEARNVGVCFADASVRELGVSEFLDNDIYS 181
Query: 180 NVESALVALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ + A K E +R CG+ ++ER +F +D+ QDL R
Sbjct: 182 NFESLVIQLGVKECLVTMDVARKDVELAKIRAIADSCGIAISERPVADFGVKDIEQDLTR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L+R + ++A G+ AL+ Y +L+D +N+G Y + ++ L YM+LD++A+
Sbjct: 242 LLRDERSAGTLPQTELKLAMGSASALIKYLNVLTDPTNFGQYQLYQHDLSQYMKLDASAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D K+ SLFGL+N C +G RLL WLKQPL+D+ I R +V+AFV
Sbjct: 302 RALNLMPGPRDGAKSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLAAIEQRQQLVEAFV 360
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ-YEG 416
+T LRQ +++ HL+ I D+ RL ++++A L+ +V+ YQ +IRLP SAL +
Sbjct: 361 VNTELRQTMQEEHLRSIPDLYRLAKRFQRKQANLEDVVRAYQVAIRLPGFVSALGDVMDE 420
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
Q+ + ++ Y L +D L +VET+VDL LEN E++I +D GL ++ +
Sbjct: 421 QYQTPLETEYTSKLRGFSDS--LAMLEEMVETTVDLAALENHEFIIKPEFDDGLRVIRKK 478
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ + + H++ + +L+ ++K L ++ G FR+T+ E IR K ++
Sbjct: 479 LDKVRYDMDMEHRRVSKNLNQDIEKKLFMENHRVHGWCFRLTRNEAGCIRNK--KEYQEC 536
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT + L+ L ++ ++ Y Q LVN V+ A ++ + + LA +L+ L
Sbjct: 537 STQKNGVYFTTSNLQSLRREHDQLSSNYNRTQTGLVNEVVNVAASYCPVLEQLAGVLAHL 596
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV++SFA + P+ Y RP ++P G+ +L+ +RHPC+E QD ++FI ND LIR +S
Sbjct: 597 DVIVSFAHASMHAPSGYVRPKMHPRGTGNTVLKEARHPCMEMQDDISFITNDVSLIRDES 656
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D QL+GV
Sbjct: 657 SFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCTEAELTIFDCILARVGASDSQLKGV 716
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR LFAT
Sbjct: 717 STFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFGLFAT 776
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI-------------DSTSRKLTMLYKVE 823
HFHELTALA + V N HV A I + R++T+LY+VE
Sbjct: 777 HFHELTALAD--------RYQKAVKNLHVVAFIGNGNESDSEAETKEKKKRQVTLLYRVE 828
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
PG CDQSFGIHVAE FP+ VV +AR+KA ELEDFT + A++ S
Sbjct: 829 PGICDQSFGIHVAELVRFPDKVVNMARQKAEELEDFTSATTEDGQAQLPAPS 880
>gi|189211064|ref|XP_001941863.1| DNA mismatch repair protein MSH2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977956|gb|EDU44582.1| DNA mismatch repair protein MSH2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 930
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/881 (42%), Positives = 540/881 (61%), Gaps = 55/881 (6%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PE+K + GF F++ L VR FDR DYY+AHGE+A FIA T Y TT +R+
Sbjct: 5 PEIK--EEDESGFCKFFRNLGEKHDETVRIFDRGDYYSAHGEDAKFIANTVYKTTAVIRK 62
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGSY 125
LG L SV+++ +F RD L R +E+++ +G +W++VK +PGNL
Sbjct: 63 LGR-EPGLESVTMTITVFRNFLRDALF-RLGKRIEIWQSTGKRMDWKVVKQASPGNLQDL 120
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
ED L ++++ P+I+A+ + + + +G+ + D + R LG+ EFLD+ ++N ES
Sbjct: 121 EDDL--GGQIENAPIILAVKVSAKASEARNVGVCFADASVRELGVTEFLDNDLYSNFESL 178
Query: 185 LVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
L+ LG KECL+ ++ K E LR CG + ER + +F T+D+ QDL RL++
Sbjct: 179 LIQLGVKECLIQLDSNKKDVELSKLRTIADNCGCAVAERAQADFGTKDIDQDLPRLLKDE 238
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
++ +A GA L+ Y ++SD SN+G Y + ++ L YM+LD+AA++ALN+
Sbjct: 239 RAAGSLHLTDLNLAMGAAACLIRYLGVMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNL 298
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
+ D KN SL+GL+N C G RLL WLKQPL++V EI R +V+AFV+DT L
Sbjct: 299 MPGPRDGAKNMSLYGLLNH-CKTPTGSRLLAQWLKQPLMNVKEIERRQQLVEAFVNDTEL 357
Query: 364 RQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
RQ +++ HL+ I D+ RL +++ A L+ +V+ YQ IRLP S+L+ +++
Sbjct: 358 RQTMQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSSLE-------AVM 410
Query: 423 KERYLDPLESLTDD---DHLNKFIAL---VETSVDLDQLENGEYMISSSYDTGLSALKNE 476
E+Y +PL++ D + F L VET+VDL+ L+N E++I +D L ++
Sbjct: 411 DEQYKEPLDAEYTDKLRQYTTAFAGLQDMVETTVDLEALDNHEFIIKPEFDESLKIIRKR 470
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ L+R++ S H + DL+ +K L L+ G FR+T+ E IR+K Q+ +
Sbjct: 471 LDKLKREMESEHMRVGDDLNQDTEKKLFLENHKVNGWCFRLTRNEAGCIRQK--KQYHEI 528
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T+K+GV FT L++ ++ ++ E Y Q LVN V+ A ++ + + LA +L+ L
Sbjct: 529 STQKNGVYFTTNTLQEKRREFDQLSENYNRTQSGLVNEVVSVASSYVPVVEKLAAVLAHL 588
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV+++FA ++ PT YTRP ++P G+ IL+ +RHPC+E QD ++FI ND L+R +S
Sbjct: 589 DVIVAFAHVSVHAPTSYTRPTMHPRGTGNTILKEARHPCMEMQDDISFITNDVSLVRNES 648
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D Q++GV
Sbjct: 649 EFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQIKGV 708
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++V+EI A LFAT
Sbjct: 709 STFMAEMLETANILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAFALFAT 768
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS------------------RKLTM 818
HFHELTAL V N HV AHI S R++T+
Sbjct: 769 HFHELTALVDTYPQ---------VQNLHVVAHISEGSAPVVNDDGDVDMDAVQKKREVTL 819
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
LYKVEPG DQSFGIHVAE FP+ V+ +A+ KA ELEDF
Sbjct: 820 LYKVEPGFSDQSFGIHVAELVRFPQKVINMAKRKADELEDF 860
>gi|402080716|gb|EJT75861.1| DNA mismatch repair protein msh-2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 923
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/921 (41%), Positives = 558/921 (60%), Gaps = 67/921 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTR-AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ ++K+LP+ +R FDR D+YTAHG++ATFIA+T Y TT+ +R
Sbjct: 5 PELKVDDEH--GFIRYFKSLPSTHEDTIRIFDRGDWYTAHGKDATFIAQTVYKTTSVVRH 62
Query: 68 LG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG + L SV+++ +F RD L + +E+YE NW++ K +PGNL
Sbjct: 63 LGRSDHTGLPSVTMTMTVFRQFLRDAL-HKLGKRVEIYESPNGRMNWKVAKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
E+ L + P+I+A+ + + + +G+ + D + R LG++EFLD+ F+N E+
Sbjct: 122 VEEEL---GQSDSAPMILAIKISTKASEARNVGVCFADASVRELGVSEFLDNDLFSNFEA 178
Query: 184 ALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG KECL+ + K + L+ + CG+ ++ER ++F T+D+ QDL RL+
Sbjct: 179 LLIQLGVKECLIQHDKADVNKDPDLAKLKQIIDSCGIAMSERSVSDFGTKDIEQDLARLL 238
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ S+ P DL ++A GA AL+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 239 KDERSASLLPQTDL----KLAMGAASALIKYLNVLQDPSNFGQYQLFQHDLSQFMKLDAA 294
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D +K SLFGL+N C +G RLL WLKQPL++ EI +R +V+A
Sbjct: 295 ALKALNLMPGARDGSKTMSLFGLLNH-CKTPVGSRLLSQWLKQPLMNKEEIESRQQLVEA 353
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F++DT LRQ +++ HL+ + D+ RL ++++A L+ +V+ YQ IRLP +
Sbjct: 354 FMNDTELRQTMQEEHLRSVPDLYRLAKRFQRKKANLEDVVRTYQVVIRLP-------GFI 406
Query: 416 GQFSSLIKERYLDPLESLTD------DDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G ++ E Y DP+++ D L + +VET+VDLD L+N E++I +D G
Sbjct: 407 GTLEGVMDEVYRDPIDATYTTKLRELSDSLVRLQEMVETTVDLDALDNHEFIIKPEFDDG 466
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L ++ + + L ++ + A DL +DK + L+ G R+T+ E IR
Sbjct: 467 LRIIRKKLDRLRSDMNKEFTKAADDLGQEMDKKIFLENHKVHGWCMRLTRTEAGCIRN-- 524
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
T+ + T+K+GV FT L+ L ++ ++ + Y Q LVN V+ A +++ + + L
Sbjct: 525 TSGYQECSTQKNGVYFTTKHLQSLRREFDQLSKNYDRTQGSLVNEVVSVAASYAPLLERL 584
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
+L+ LDV++SFA + P Y RP ++ G +L+ +RHPC+E QD V FI ND
Sbjct: 585 GGVLAHLDVIVSFAHCSVHAPISYVRPKVHARGEGRTLLKEARHPCLEMQDDVQFITNDV 644
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
+L R S F IITGPNMGGKST+IRQVGV LMAQ+G FVPC A I+V D I ARVGA
Sbjct: 645 ELDRQGSSFLIITGPNMGGKSTYIRQVGVIALMAQIGCFVPCAEAEITVYDAILARVGAS 704
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI
Sbjct: 705 DSQLKGVSTFMAEMLETANILKSATADSLIIIDELGRGTSTYDGFGLAWAISEHIVREIG 764
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS--------RKLTMLYK 821
+ LFATHFHELTALA ++ V N HV+AHI TS R++T+LYK
Sbjct: 765 SAALFATHFHELTALADQHKQ---------VDNLHVTAHISGTSASAKEDEKREVTLLYK 815
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS 881
VEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT D ++ +
Sbjct: 816 VEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTAK---HDSLGLQYSKE----- 867
Query: 882 DPNDMSRGAARAHQFLKEFSD 902
D+ +G+AR + L ++ D
Sbjct: 868 ---DVEQGSARLKEILVKWKD 885
>gi|261206138|ref|XP_002627806.1| DNA mismatch repair protein msh-2 [Ajellomyces dermatitidis
SLH14081]
gi|239592865|gb|EEQ75446.1| DNA mismatch repair protein msh-2 [Ajellomyces dermatitidis
SLH14081]
Length = 966
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/872 (42%), Positives = 536/872 (61%), Gaps = 45/872 (5%)
Query: 20 GFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG-TGSDALS 76
GF+ F+++LP +D+ +R FDR D++TAHG +A +IA+ Y TT+ L+ LG + + L
Sbjct: 39 GFIRFFRSLPAKDDSSTIRVFDRGDFFTAHGPDAEYIARAVYKTTSVLKSLGRSDTGGLP 98
Query: 77 SVSVSKNMFETIARDLLLERTDHTLELYEGSG---SNWRLVKSGTPGNLGSYEDVLFANN 133
SV+++ +F R+ L R +E++ G +NW+L K +PGNL E+ L A
Sbjct: 99 SVTMTVTVFRNFLREALF-RLSMRVEIWASQGGGKANWKLAKQASPGNLQDVEEELGAGG 157
Query: 134 -EMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCK 191
M P+I+A+ + + + +G+ + D + R LG++EF+D+ ++N ES ++ LG K
Sbjct: 158 VAMDSAPIILAVKISAKASETRQVGVCFADASVRELGVSEFVDNDLYSNFESLVIQLGVK 217
Query: 192 ECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR----GSVEP 246
ECL+ E K E LR L CG+ +++R +F T+D+ QDL RL+R P
Sbjct: 218 ECLITAETQKKDVELGKLRSILDSCGIAISQRPMADFGTKDIEQDLSRLLRDERAAGALP 277
Query: 247 VRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLES 306
DL ++A G+ AL+ Y +SD +N+G Y + ++ L YM+LD+ A+RALN++
Sbjct: 278 QTDL----KLAMGSAAALIKYLGAMSDATNFGQYQLYQHDLSQYMKLDAPALRALNLMPG 333
Query: 307 KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQD 366
D KN SL+GL+N C G RLL WLKQPL++ +I R +V+AFV DT LRQ
Sbjct: 334 PRDGAKNMSLYGLLNH-CKTPAGSRLLAQWLKQPLMNHEDIEKRQQLVEAFVVDTELRQT 392
Query: 367 LRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEGQFSSLIKE 424
+++ HL+ I D+ RL ++ A L+ +V++YQ IRLP +I + + Q+ ++
Sbjct: 393 MQEDHLRSIPDLYRLAKRFQRNLANLEDVVRVYQVVIRLPGFINTLESVMDEQYQGPLEA 452
Query: 425 RYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
Y L +L+D +K +VET+VDLD L+N E++I +D L ++ + + L+ +
Sbjct: 453 EYTAKLRNLSDS--FSKLAEMVETTVDLDALDNHEFIIKPEFDGSLRIIRKKLDKLKHDM 510
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
HK +L+ DK L L+ G FR+T+ E IR K ++ T+K+GV
Sbjct: 511 DVEHKIVGKNLNQDTDKKLFLENHRVHGWCFRLTRNEAGCIRNK--REYQECSTQKNGVY 568
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
FT + ++ ++ ++ Y Q LV V+ A ++ + + LA++L+ LDV++SFA
Sbjct: 569 FTTSTMQSFRREHDQLSSNYNRTQTGLVQEVVNVAASYCPLLEQLASVLAHLDVIVSFAH 628
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGP 664
++ PT Y RP I+P G+ +L+ +RHPC+E QD ++FI ND L+R +S F IITGP
Sbjct: 629 VSVHAPTAYVRPKIHPRGTGNTVLKEARHPCMEMQDDISFITNDVFLLRNESSFLIITGP 688
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NMGGKST+IRQ+GV LMAQ G FVPC A +++ D I ARVGA D QL+GVSTFM EML
Sbjct: 689 NMGGKSTYIRQIGVIALMAQTGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEML 748
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
ETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR LFATHFHELTAL
Sbjct: 749 ETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFALFATHFHELTAL 808
Query: 785 AHENANEFNTKQMVGVANYHVSAHI---------DSTS---RKLTMLYKVEPGACDQSFG 832
+ N V N HV A I DST R++T+LY+VEPG CDQSFG
Sbjct: 809 QEQYPN--------SVKNLHVVAFIGNGTEQKENDSTGKSKREVTLLYRVEPGVCDQSFG 860
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
IHVAE FPE VV +AR+KA ELEDFT S +
Sbjct: 861 IHVAELVRFPEKVVNMARQKAEELEDFTSSTI 892
>gi|322708049|gb|EFY99626.1| DNA mismatch repair protein MSH2 [Metarhizium anisopliae ARSEF 23]
Length = 1058
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/880 (43%), Positives = 539/880 (61%), Gaps = 55/880 (6%)
Query: 8 LPELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTA 64
LP L GF+ FYK+LP+ DT +R FDR D+YTAHG+NA+FIAKT Y TT+
Sbjct: 138 LPVLWFKLDDEGGFIRFYKSLPDVGEDT--IRIFDRGDWYTAHGDNASFIAKTVYKTTSV 195
Query: 65 LRQLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGN 121
LRQLG L SV+++ +F R+ L + +E++E NW+ VK +PGN
Sbjct: 196 LRQLGRNDHTGLPSVTMTVTVFRQFLREALF-KLGKRIEIWESPSGRMNWKCVKQASPGN 254
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTN 180
L ED L +++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N
Sbjct: 255 LQDIEDDL--GGQIESAPMIIAVKISAKASEARNVGVCFADASVRELGVSEFLDNDLYSN 312
Query: 181 VESALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLD 237
ES L+ LG +EC++ + K E L+ + CGV + ER +F TRD+ QDL
Sbjct: 313 FESLLIQLGVRECVIQLDKGDKDKDPELAKLKQIIDNCGVAIAERPAGDFGTRDIEQDLA 372
Query: 238 RLVRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
RL++ ++ P DL ++A G+ +L+ Y +L D SN+G Y++ ++ L +M+L
Sbjct: 373 RLLKDDKSVNLLPQTDL----KLAMGSAASLIKYLGVLQDPSNFGQYHLYQHDLAQFMKL 428
Query: 294 DSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
D+AA++ALN++ D +K S++G++N C +G RLL WLKQPL+D +EI R +
Sbjct: 429 DAAALKALNLMPGPRDGSKTMSIYGVLNH-CKTPVGSRLLAQWLKQPLMDKDEIEKRQQL 487
Query: 354 VQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V+AF +DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP
Sbjct: 488 VEAFFNDTELRQTMQEEHLRSVPDLYRLSKRFQRGKANLEDVVRAYQVVIRLP------- 540
Query: 413 QYEGQFSSLIKERYLDPLESLTD------DDHLNKFIALVETSVDLDQLENGEYMISSSY 466
+ G F ++ E Y DPL+ D+L K +VE +VDLD L+ EY+I S Y
Sbjct: 541 GFIGTFEGVMDEAYRDPLDIAYTTKLRELSDNLGKLQDMVEQTVDLDALDRHEYIIKSEY 600
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKI 525
D GL ++ + + L+R I + + A DL DK + L+ + G R+T++E I
Sbjct: 601 DQGLQTIRKKLDQLDRDIRAEFHEAARDLGQEADKKIFLETSHKVHGVCMRLTRQEAGCI 660
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
R K + Q T+K+GV FT K++ +Y ++ + Y Q LVN V+ A ++ +
Sbjct: 661 RNKSSYQ--ECSTQKNGVYFTTKKMQSYRREYDQLSQNYNRTQSSLVNEVVNVASSYCPV 718
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFI 645
+ LA +L+ LDV++S A + P Y RP I+ G L G+RHPC+E QD V FI
Sbjct: 719 LERLAGVLAHLDVIVSLAHCSVHAPEAYVRPKIHTRGEGQTRLIGARHPCMELQDDVQFI 778
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
ND + R KS F IITGPNMGGKST+IRQ GV LMAQ+G FVPC A +++ D I AR
Sbjct: 779 TNDLEFTRDKSSFLIITGPNMGGKSTYIRQAGVIALMAQIGCFVPCAEAELTIFDSILAR 838
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V
Sbjct: 839 VGASDSQLKGVSTFMAEMLETANILKSATKESLIIIDELGRGTSTYDGFGLAWAISEHIV 898
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-----DSTSRKLTMLY 820
+EI +FATHFHELTALA Q V N HV+AHI D++ R++T+LY
Sbjct: 899 KEIGCFAMFATHFHELTALA---------DQYPQVRNLHVTAHISGTGKDNSKREVTLLY 949
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
KVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 950 KVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 989
>gi|432923891|ref|XP_004080503.1| PREDICTED: DNA mismatch repair protein Msh2-like [Oryzias latipes]
Length = 934
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/931 (40%), Positives = 565/931 (60%), Gaps = 43/931 (4%)
Query: 11 LKLDAKQARGFLSFYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+D+ GFLSF ++P DT R FDR +YYT HG++A F AK + T ++ L
Sbjct: 9 FSMDSVAEHGFLSFIFSMPEKPDT-TFRIFDRNEYYTVHGKDAIFAAKEVFKTNGVIKYL 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS-----NWRLVKSGTPGNLG 123
G GS L SV +SK FE +DLLL R + +E+Y +WR+ +PGNL
Sbjct: 68 GAGSRKLESVILSKLNFEAFVKDLLLVR-QYRVEVYRNHSKSSKEHDWRIEYKASPGNLT 126
Query: 124 SYEDVLF--ANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+ED+LF A V+ F + +G+GYVD +R +G+ EF D+ F+N+
Sbjct: 127 QFEDILFGGATGAEGCAGVVAVRFATAADGQRVVGVGYVDAAQRKMGVCEFPDNEIFSNL 186
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
ES LV + KECLL + S++ LR+ + R G+++++RK+ +F ++D+ QDL+RL+R
Sbjct: 187 ESLLVQISPKECLL-AQGDSSTDGNKLREVVQRGGMLVSDRKRADFSSKDITQDLNRLLR 245
Query: 242 GSVEPVRDLVSGF------EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
V+ + S ++A L A++ + +LLSDESN+ ++ + L YMRLD+
Sbjct: 246 --VKKGEAMASSTLSELDKQVAMSCLAAVVRFLDLLSDESNFNSFSLASLDLGQYMRLDN 303
Query: 296 AAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
AA+ ALN+ + S D + SL GL+N+ C G+RL++ W+KQPL+D +I RLD+V
Sbjct: 304 AAVGALNLFQGSPDDISGAHSLAGLLNK-CRTPQGQRLVNQWIKQPLMDKTKIEERLDLV 362
Query: 355 QAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
++FV D+ LRQ + L R D+ RL + A LQ ++YQ+ ++P + +A ++
Sbjct: 363 ESFVCDSELRQTCQGDLLHRFPDLHRLAKKFHRHSATLQDCYRVYQAVSQIPGLIAAFEK 422
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
Y G + L++ + PL L D K+ +VET++D++Q+++ E+++ +S+D L+ L
Sbjct: 423 YSGSYQVLLQAVFTSPLTDLQTD--FTKYQEMVETTLDMNQIDHHEFLVKASFDPVLTEL 480
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ + + LE + ++ A +L L K +KL+ G R+T KEE +R +F
Sbjct: 481 REKMDDLEESMQAVLNSAARELGLEAGKTVKLESNAMLGFYLRVTCKEEKGLRN--NKKF 538
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
L+ +K+GV+FTN+KL L ++Y + EEY+ Q +V +I A + + ++L+ ++
Sbjct: 539 TTLDVQKNGVRFTNSKLSSLNEEYTRNKEEYEEAQNAIVKEIINIASGYVDPLQTLSDVI 598
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
++LD ++S A + S P PY RP I + L +RHPC+E FIPND ++
Sbjct: 599 AQLDAVVSLALASVSAPVPYVRPRILDEGCRRLELVQARHPCMETDADTAFIPNDVSFVQ 658
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
G+ F IITGPNMGGKST+IRQVGV LMAQ+G FVPC++A +SV D I ARVGAGD Q+
Sbjct: 659 GERSFYIITGPNMGGKSTYIRQVGVIALMAQIGCFVPCEKAELSVTDSILARVGAGDSQV 718
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+GVSTFM EMLETA+IL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI EH+ +I L
Sbjct: 719 KGVSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCL 778
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHELTALA Q V N HV+A +T LTMLY+V+ G CDQSFGI
Sbjct: 779 FATHFHELTALA---------SQQPSVHNLHVTAL--TTHNTLTMLYRVKAGVCDQSFGI 827
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
HVAE A FP +V+ +AREKA ELE+F + + + E +KR+R D G +
Sbjct: 828 HVAELACFPPAVLAVAREKAEELEEFQ-EPMGNQQEEDEPQTKRRR----TDKQVGESLI 882
Query: 894 HQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL++ +P++TM +E ++R+K +L
Sbjct: 883 QEFLQKVKSLPVDTMAEEEVKVELRRLKQEL 913
>gi|259482119|tpe|CBF76294.1| TPA: DNA mismatch repair protein Msh2, putative (AFU_orthologue;
AFUA_3G09850) [Aspergillus nidulans FGSC A4]
Length = 945
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/876 (42%), Positives = 538/876 (61%), Gaps = 38/876 (4%)
Query: 13 LDAKQARGFLSFYKTLPND----TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
D GF+ FY++L +D +R FDR D+Y+AHG+ A FIA+T Y TT+ LR L
Sbjct: 7 FDVDDEVGFIRFYRSLASDDSHNNETIRIFDRGDWYSAHGKEAEFIARTVYKTTSVLRNL 66
Query: 69 G-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPGNLGS 124
G + + L SV++S +F R+ L R + +E++ +G+ +W+ VK +PGNL
Sbjct: 67 GRSETGGLPSVTMSITVFRNFLREALF-RLNKRIEIWGSAGTGKGHWKKVKQASPGNLQD 125
Query: 125 YEDVLFANNEMQDT---PVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTN 180
E+ L A M+ + P+I+A+ + + +G+ + D + R LG++EFLD+ ++N
Sbjct: 126 VEEELGAMG-MEGSNGAPIIMAVKLSAKAGEARNVGVCFADASVRELGVSEFLDNDVYSN 184
Query: 181 VESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
E+ ++ LG KECL+ + K E +R CG+ ++ER ++F +D+ QDL RL
Sbjct: 185 FEALVIQLGVKECLVVQDVNRKDVEVAKIRAICDNCGIAISERPASDFGVKDIEQDLTRL 244
Query: 240 VRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
+R + ++A G AL+ Y ++SD +N+G Y + ++ L YM+LD+AA+R
Sbjct: 245 LRDERSAGTLPETELKLAMGGAAALIRYLGVMSDATNFGQYQLYQHDLAQYMKLDAAALR 304
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
ALN++ D +K+ SLFGL+N C +G RLL WLKQPL+D+ EI R +V+AFV
Sbjct: 305 ALNLMPGPRDGSKSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLAEIEKRQRLVEAFVV 363
Query: 360 DTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQF 418
T LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++L+
Sbjct: 364 STELRQMMQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVNSLE------ 417
Query: 419 SSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
+++ E Y PLE+ L K +VET+VDLD LEN E++I +D L
Sbjct: 418 -NVMDEEYQTPLETEYTAKLRNHSASLAKLEEMVETTVDLDALENHEFIIKPEFDDSLRI 476
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
++ + + L ++ HK A DLD +DK L L+ +G FR+T+ E IR K Q
Sbjct: 477 IRKKLDQLRHDMYLEHKAVARDLDQEMDKKLFLENHRVYGWCFRLTRNEAGCIRNKKAYQ 536
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ + + LA +
Sbjct: 537 --ECSTQKNGVYFTTSTMQSLRREHDQLSSNYNRTQTGLVSEVVNVAASYCPVLEQLAGV 594
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
L+ LDV++SFA + PT YT+P I+P G+ +L+ +RHPC+E QD ++FI ND LI
Sbjct: 595 LAHLDVIVSFAHASVHAPTAYTKPKIHPRGTGNTVLKEARHPCMEMQDDISFITNDVSLI 654
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
R +S F IITGPNMGGKST+IR +GV LMAQ+G FVPC A +++ DCI ARVGA D Q
Sbjct: 655 RDESSFLIITGPNMGGKSTYIRMIGVIALMAQIGCFVPCTEAELTIFDCILARVGASDSQ 714
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR
Sbjct: 715 LKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCFG 774
Query: 773 LFATHFHELTALAHENANEFNTKQMVG------VANYHVSAHIDSTSRKLTMLYKVEPGA 826
LFATHFHELT LA +V AN T +K+T+LY+VEPG
Sbjct: 775 LFATHFHELTTLADRYPKSVKNLHVVAFIGDGTTANEEDEKEKRKTRQKVTLLYRVEPGI 834
Query: 827 CDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
CDQSFGIHVAE FPE VV +AR+KA ELEDFT +
Sbjct: 835 CDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSA 870
>gi|380496043|emb|CCF31929.1| DNA mismatch repair protein msh-2 [Colletotrichum higginsianum]
Length = 921
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/873 (43%), Positives = 546/873 (62%), Gaps = 46/873 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLP---NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK+D + GF+ F+K+LP DT VR FDR D+YT+HGE+A FIA+T Y TT+ +
Sbjct: 5 PELKVDDEH--GFIRFFKSLPAVHEDT--VRIFDRGDWYTSHGEDANFIARTVYKTTSVV 60
Query: 66 RQLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNL 122
R LG L+SV+++ +F R+ L + +E++E +G NW++VK +PGNL
Sbjct: 61 RTLGRDEKTGLASVTMTVTVFRQFLREALF-KLGKRIEIWESTGGRMNWKVVKQASPGNL 119
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L +++ P+I+A+ + + + ++G+ + D + R LG++EFLD+ F+N
Sbjct: 120 QDVEEDL--GGQVEAAPMILAVKISTKTSEARSVGVCFADASVRELGVSEFLDNDLFSNF 177
Query: 182 ESALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
E+ L+ LG +ECL+ + K + L+ + CGV ++ER EF T+D+ QDL R
Sbjct: 178 EALLIQLGVRECLIQMDKADKNKDPDLTKLKQIIGNCGVSVSERSAGEFGTKDIEQDLAR 237
Query: 239 LVRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L++ ++ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD
Sbjct: 238 LLKDERSTTLLPQTDL----KLAMGSAAALIKYLGVLHDPSNFGQYQLYQHDLSQFMKLD 293
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
+AA++ALN++ D K+ SL+GL+N C +G RLL WLKQPL++ EI R +V
Sbjct: 294 AAALKALNLMPGARDGAKSMSLYGLLNH-CKTPVGSRLLSQWLKQPLMNKAEIEKRQQLV 352
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+AFV+DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP L+
Sbjct: 353 EAFVNDTELRQTMQEEHLRSVPDLYRLAKRFQRGKANLEDVVRAYQVIIRLPGFMGTLEG 412
Query: 414 -YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
+ + + E Y PL L++ L K +VET+VDLD L+N EY+I +D L
Sbjct: 413 VMDEAYRDPLDETYTTPLRGLSNS--LAKLAEMVETTVDLDALDNHEYIIKPEFDDSLRI 470
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
++ + + L+R I A DL V K + L+ G+ R+T++E IR K +
Sbjct: 471 IRKKLDKLKRDIDQEFSDAARDLKQEVGKKIFLENHKVHGYCMRLTRQEAGAIRNK--SG 528
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
+ T+K+GV FT L+ L ++ ++ + Y Q LV+ V+ A ++ + + LA +
Sbjct: 529 YQECSTQKNGVYFTTKTLQSLRREFDQLSQNYNRTQSSLVSEVVGVAASYCPVLERLAGI 588
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
L+ LDV++SFA + P+ Y RP ++ G IL+ +RHPC+E QD V FI ND L
Sbjct: 589 LAHLDVIVSFAHCSVHAPSEYVRPTMHKRGEGQTILKEARHPCLEMQDDVQFITNDVTLT 648
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
R KS F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA D Q
Sbjct: 649 RDKSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCTEAELTIFDSILARVGASDSQ 708
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 709 LKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFA 768
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-----DSTSRKLTMLYKVEPGAC 827
+FATHFHELTALA E+ V N HV+AHI +++ R++T+LYKV+ G C
Sbjct: 769 MFATHFHELTALADEHPQ---------VHNLHVAAHIGGGGGENSKREVTLLYKVDDGVC 819
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
DQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 820 DQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 852
>gi|346327086|gb|EGX96682.1| DNA mismatch repair protein MSH2 [Cordyceps militaris CM01]
Length = 930
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/881 (43%), Positives = 540/881 (61%), Gaps = 54/881 (6%)
Query: 9 PELK-LDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK LD + + F+ F+K+LP ND VR FDR D+YT+HG++A +IA T Y TT+ +
Sbjct: 5 PELKKLDDEGS--FIRFFKSLPAPNDD-TVRIFDRGDWYTSHGDDANYIANTVYKTTSVV 61
Query: 66 RQLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNL 122
RQLG L SV+++ +F R+ L + +E+++ NWR K +PGNL
Sbjct: 62 RQLGRNDHTGLPSVTMTVTVFRQFLREALF-KLGRRVEIWQSPNGRMNWRCAKQASPGNL 120
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
ED L + + P+I+++ + R + +G+ + D + R LG++EFLD+ ++N
Sbjct: 121 QDVEDDL--GGQFESAPMIMSVKISTRASEARAVGVCFADASVRELGVSEFLDNDLYSNF 178
Query: 182 ESALVALGCKECLLP---TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
E+ L+ LG +ECLLP +E K E LR L CGV + ER +F RD+ QDL R
Sbjct: 179 EALLIQLGVRECLLPQDKSEKDKDPELAKLRQILDSCGVAIAERPAADFGIRDIDQDLAR 238
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ + ++A G+ +L+ Y +L D SN+G Y + ++ L +M+LD+AA+
Sbjct: 239 LLKDETATALLPQTDLKLAMGSAASLIKYLSILQDPSNFGQYQLYQHDLAQFMKLDAAAL 298
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
+ALN++ D K S++G++N C +G RLL WLKQPL+ +EI R +V+AFV
Sbjct: 299 KALNLMPGPRDGAKTMSIYGVLNH-CKTPVGSRLLAQWLKQPLMSKDEIEKRQQLVEAFV 357
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP + G
Sbjct: 358 TDTELRQTMQETHLRSVPDLYRLSKRFQRNKADLEDVVRAYQVIIRLP-------GFLGT 410
Query: 418 FSSLIKERYLDPLES-----LTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++ E Y DPL++ L D D L + +VE +VDLD L+ EY+I YD GL
Sbjct: 411 LEGVMDEAYRDPLDAAYTSKLRDLSDSLGRLQDMVEQTVDLDALDRHEYIIKPDYDAGLR 470
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKIRKKLT 530
++ + ++L+R I + ++ A+DL DK + L+ + G R+T++E IR +
Sbjct: 471 IIRKKLDALDRNIRAEFQEAAADLGQEADKKIFLETSHKVHGVCMRLTRQEASCIRNR-- 528
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
Q+ T+K+GV FT KL+ ++ ++ + Y Q LV+ V+Q A ++ + + LA
Sbjct: 529 AQYQECSTQKNGVYFTTKKLQAYRREHDQLSQNYNRTQSGLVHEVVQVAASYCPVLERLA 588
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPD-VGDIILEGSRHPCVEAQDWVNFIPNDC 649
+L+ LDV++S A A P Y RP ++PP G L G+RHPC+E QD V FI ND
Sbjct: 589 GVLAHLDVIVSLAHCAVHAPEVYVRPTMHPPGGQGQTRLVGARHPCLELQDDVQFITNDV 648
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
L R S F IITGPNMGGKST+IRQ+G L+AQ+GSFVPC A +++ D + ARVGA
Sbjct: 649 TLTRDASSFLIITGPNMGGKSTYIRQIGAIALLAQIGSFVPCTSAELTIFDAVLARVGAS 708
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EIR
Sbjct: 709 DSQLKGVSTFMAEMLETANILKSATADSLIIIDELGRGTSTYDGFGLAWAISEHIVKEIR 768
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI----------DSTSRKLTML 819
LFATHFHELTALA ++ N VAN HV+AHI D R++T+L
Sbjct: 769 CFALFATHFHELTALADQHPN---------VANLHVTAHIGGADGGKNGDDGAKREVTLL 819
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
YKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 820 YKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 860
>gi|310801343|gb|EFQ36236.1| MutS domain V [Glomerella graminicola M1.001]
Length = 922
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/879 (43%), Positives = 542/879 (61%), Gaps = 57/879 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLP---NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK+D + GF+ F+K+LP DT VR FDR D+YT+HGE+A FIA+T Y TT+ +
Sbjct: 5 PELKVDDEH--GFIRFFKSLPAVHEDT--VRIFDRGDWYTSHGEDANFIARTVYKTTSVV 60
Query: 66 RQLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNL 122
R LG L SV+++ +F R+ L + +E++E +G NW++ K +PGNL
Sbjct: 61 RTLGRDDKTGLPSVTMTVTVFRQFLREALF-KLGKRIEIWESTGGRMNWQVAKQASPGNL 119
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L +++ P+I+A+ + + ++G+ + D + R LG++EFLD+ F+N
Sbjct: 120 QDVEEDL--GGQIEAAPMILAVKISTKATEARSVGVCFADASVRELGVSEFLDNDLFSNF 177
Query: 182 ESALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
E+ L+ LG +ECL+ + K + L+ +T CGV ++ER +EF T+D+ QDL R
Sbjct: 178 EALLIQLGVRECLVQMDKADKNKDPDLAKLKQIITNCGVAVSERSTSEFGTKDIEQDLAR 237
Query: 239 LVRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L++ ++ P DL ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD
Sbjct: 238 LLKDERATTLLPQTDL----KLAMGSAAALIKYLGVLHDPSNFGQYQLYQHDLSQFMKLD 293
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
+AA++ALN++ D K+ SL+GL+N C G RLL WLKQPL++ EI R +V
Sbjct: 294 AAALKALNLMPGARDGAKSMSLYGLLNH-CKTPAGSRLLSQWLKQPLMNKEEIEKRQQLV 352
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+AFV+DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP
Sbjct: 353 EAFVNDTELRQTMQEEHLRSVPDLYRLAKRFQRGKANLEDVVRAYQVVIRLP-------G 405
Query: 414 YEGQFSSLIKERYLDPLESLTD------DDHLNKFIALVETSVDLDQLENGEYMISSSYD 467
+ G ++ E Y DPL+ D L K +VET+VDLD L+N EY+I +D
Sbjct: 406 FLGTLEGVMDEAYRDPLDVAYTTPLRGLSDSLAKLSEMVETTVDLDALDNHEYIIKPEFD 465
Query: 468 TGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRK 527
L ++ + + L+R I A DL V K + L+ G+ R+T++E IR
Sbjct: 466 DSLRIIRKKLDKLKRDIDQEFSDAARDLRQEVGKKIFLENHKVHGYCMRLTRQEAGAIRN 525
Query: 528 KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFK 587
K + + T+K+GV FT ++ L ++ ++ + Y Q LV+ V+ A ++S + +
Sbjct: 526 K--SGYQECSTQKNGVYFTTKTMQSLRREFDQLSQNYNRTQSSLVSEVVGVAASYSPVLE 583
Query: 588 SLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPN 647
LA +L+ LDV++S A + P+ Y RP I+ G IL+ +RHPC+E QD V FI N
Sbjct: 584 RLAGVLAHLDVIISLAHCSVHAPSEYVRPKIHKRGEGQTILKEARHPCLEMQDDVQFITN 643
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
D L R KS F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVG
Sbjct: 644 DVALTRDKSSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCTEAELTIFDSILARVG 703
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
A D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+E
Sbjct: 704 ASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKE 763
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI------DSTSRKLTMLYK 821
I +FATHFHELTALA E+ V N HV+AHI ++ R++T+LYK
Sbjct: 764 IGCFAMFATHFHELTALADEHPQ---------VHNLHVTAHIGGDGGGKNSKREVTLLYK 814
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
V+ G CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 815 VDDGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 853
>gi|384871702|ref|NP_001245210.1| DNA mismatch repair protein Msh2 isoform 2 [Homo sapiens]
gi|194385858|dbj|BAG65304.1| unnamed protein product [Homo sapiens]
Length = 868
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/872 (42%), Positives = 541/872 (62%), Gaps = 43/872 (4%)
Query: 70 TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGNL 122
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGNL
Sbjct: 4 AGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGNL 62
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
+ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+E
Sbjct: 63 SQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLE 122
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++G
Sbjct: 123 ALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKG 181
Query: 243 --------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
+V P + ++A +L A++ + ELLSD+SN+G + + + YM+LD
Sbjct: 182 KKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLD 237
Query: 295 SAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++
Sbjct: 238 IAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNL 296
Query: 354 VQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL+
Sbjct: 297 VEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALE 356
Query: 413 QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 357 KHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE 414
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 415 LREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKN 472
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L +
Sbjct: 473 FSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDV 532
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 533 LAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFE 592
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD Q
Sbjct: 593 KDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQ 652
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 653 LKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFC 712
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFG 832
+FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFG
Sbjct: 713 MFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFG 761
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAAR 892
IHVAE ANFP+ V+ A++KA ELE+F +E +K+ + + +G
Sbjct: 762 IHVAELANFPKHVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEKI 817
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + MP M + ++K++K ++
Sbjct: 818 IQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 849
>gi|67537672|ref|XP_662610.1| hypothetical protein AN5006.2 [Aspergillus nidulans FGSC A4]
gi|40741894|gb|EAA61084.1| hypothetical protein AN5006.2 [Aspergillus nidulans FGSC A4]
Length = 1644
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/887 (42%), Positives = 543/887 (61%), Gaps = 54/887 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPND----TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTA 64
P+L++D + GF+ FY++L +D +R FDR D+Y+AHG+ A FIA+T Y TT+
Sbjct: 5 PDLRVDDEV--GFIRFYRSLASDDSHNNETIRIFDRGDWYSAHGKEAEFIARTVYKTTSV 62
Query: 65 LRQLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPG 120
LR LG + + L SV++S +F R+ L R + +E++ +G+ +W+ VK +PG
Sbjct: 63 LRNLGRSETGGLPSVTMSITVFRNFLREALF-RLNKRIEIWGSAGTGKGHWKKVKQASPG 121
Query: 121 NLGSYEDVLFANNE--MQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSH 177
NL E+ L A P+I+A+ + + +G+ + D + R LG++EFLD+
Sbjct: 122 NLQDVEEELGAMGMEGSNGAPIIMAVKLSAKAGEARNVGVCFADASVRELGVSEFLDNDV 181
Query: 178 FTNVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
++N E+ ++ LG KECL+ + K E +R CG+ ++ER ++F +D+ QDL
Sbjct: 182 YSNFEALVIQLGVKECLVVQDVNRKDVEVAKIRAICDNCGIAISERPASDFGVKDIEQDL 241
Query: 237 DRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
RL+R + ++A G AL+ Y ++SD +N+G Y + ++ L YM+LD+A
Sbjct: 242 TRLLRDERSAGTLPETELKLAMGGAAALIRYLGVMSDATNFGQYQLYQHDLAQYMKLDAA 301
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A+RALN++ D +K+ SLFGL+N C +G RLL WLKQPL+D+ EI R +V+A
Sbjct: 302 ALRALNLMPGPRDGSKSMSLFGLLNH-CKTPVGSRLLAQWLKQPLMDLAEIEKRQRLVEA 360
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV T LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++L+
Sbjct: 361 FVVSTELRQMMQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVNSLE--- 417
Query: 416 GQFSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
+++ E Y PLE+ L K +VET+VDLD LEN E++I +D
Sbjct: 418 ----NVMDEEYQTPLETEYTAKLRNHSASLAKLEEMVETTVDLDALENHEFIIKPEFDDS 473
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L ++ + + L ++ HK A DLD +DK L L+ +G FR+T+ E IR K
Sbjct: 474 LRIIRKKLDQLRHDMYLEHKAVARDLDQEMDKKLFLENHRVYGWCFRLTRNEAGCIRNKK 533
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
Q T+K+GV FT + ++ L ++ ++ Y Q LV+ V+ A ++ + + L
Sbjct: 534 AYQ--ECSTQKNGVYFTTSTMQSLRREHDQLSSNYNRTQTGLVSEVVNVAASYCPVLEQL 591
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
A +L+ LDV++SFA + PT YT+P I+P G+ +L+ +RHPC+E QD ++FI ND
Sbjct: 592 AGVLAHLDVIVSFAHASVHAPTAYTKPKIHPRGTGNTVLKEARHPCMEMQDDISFITNDV 651
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
LIR +S F IITGPNMGGKST+IR +GV LMAQ+G FVPC A +++ DCI ARVGA
Sbjct: 652 SLIRDESSFLIITGPNMGGKSTYIRMIGVIALMAQIGCFVPCTEAELTIFDCILARVGAS 711
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR
Sbjct: 712 DSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIR 771
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID--------------STSRK 815
LFATHFHELT LA V N HV A I T +K
Sbjct: 772 CFGLFATHFHELTTLADRYPK--------SVKNLHVVAFIGDGTTANEEDEKEKRKTRQK 823
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
+T+LY+VEPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT +
Sbjct: 824 VTLLYRVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSA 870
>gi|403413091|emb|CCL99791.1| predicted protein [Fibroporia radiculosa]
Length = 973
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/915 (41%), Positives = 563/915 (61%), Gaps = 71/915 (7%)
Query: 12 KLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
++D GF+ F+ LP +T VR F R +YY+AHG +A ++A + T + ++ L
Sbjct: 14 EIDNTSHPGFIKFFAGLPPKSPETGTVRLFFRNEYYSAHGPDALYVASHVFRTNSVVKYL 73
Query: 69 GTGSDA-LSSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNWRLVKSGTPGN 121
G G + L SV++++++ + R+ L + +E++ G G + ++L K +PGN
Sbjct: 74 GAGGKSGLPSVTMTESLAKQFLREALTAK-QLKVEIWGPEAGQGKKATKFKLDKEASPGN 132
Query: 122 LGSYEDVLFANNEMQDTPVIVALFP---------NFRENGCTIGLGYVDLTKRVLGLAEF 172
L + ED+LF N ++ P+++A+ + + +IG+ + D + R +G+A+F
Sbjct: 133 LQAVEDLLFVNTDILSAPIVMAIKTASTSAVGGGSSKAKTTSIGIAFADTSTREIGVADF 192
Query: 173 LDDSHFTNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEF 227
D+ F+N+E AL+ L KE L+PT + E K L++ L RCGV++TERK +EF
Sbjct: 193 ADNDLFSNIE-ALIQLSVKEALIPTGTSSGTTERDFELKKLKEVLDRCGVVITERKPSEF 251
Query: 228 KTRDLVQDLDRLVRGSVEPVRDLVS--------GFEIAPGALGALLSYAELLSDESNYGN 279
+++ D+ RL+ S P V +AP AL AL+SY LL+D SN+G
Sbjct: 252 TAKNIKDDMVRLLNPSSIPSSSNVDTSQVIPELSLPVAPSALSALVSYLSLLTDPSNHGA 311
Query: 280 YYIRKYSLDSYMRLDSAAMRALNVLESK--TDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
+ +R + L +M+LD++A+RALN++E+ +NKN +LFGL+N+ C G RLL WL
Sbjct: 312 FTLRAHDLSQFMKLDASALRALNLIEAPGTIGSNKNTTLFGLLNK-CKTAQGSRLLGSWL 370
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVK 396
KQPL++++EI+ R ++V+ V+D R+ L+ +LK + D+ R+ +K A L+ +V+
Sbjct: 371 KQPLVNLHEIHKRQNLVEILVEDANARRILQDDYLKMMPDMHRICKRFQKSVASLEDVVR 430
Query: 397 LYQSSIRLPYIRSALQQ----YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDL 452
+YQ+ ++L + + ++ +EG + LI+E YL L+ + L+K+ +VE ++DL
Sbjct: 431 IYQAVLKLEGLIATVEGIETVHEG-YKELIEETYLTKLQE--SNSSLSKYAEMVEQTLDL 487
Query: 453 DQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFG 512
D+LE ++I YD L L ++ + L + H+ A+DLD+ +DK L L+ +G
Sbjct: 488 DELERHNFVIKPDYDARLQTLADKLKDLRDGLDQEHRDVANDLDIEIDKKLHLENSPTYG 547
Query: 513 HVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV 572
+ FR+TK + K+ K ++ L T K+GV FT LK+L YQ+ E Y Q LV
Sbjct: 548 YCFRVTKNDS-KVIAKQKKKYTELCTLKNGVFFTTRTLKELATDYQETTEMYAKTQSGLV 606
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
V+ A T++ + +S T+L+ LDV++SF+ +A + P Y +P + G +IL+ +R
Sbjct: 607 KEVVNIASTYTPVLESWNTVLAHLDVIVSFSHVAVNAPESYVKPQVLEQGSGSLILKDAR 666
Query: 633 HPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
HPC+E QD ++FIPND ++I+ +S FQIITGPNMGGKST+IRQ GV LMAQ GSFVPC
Sbjct: 667 HPCLEVQDDMSFIPNDIQMIKDESEFQIITGPNMGGKSTYIRQTGVIALMAQTGSFVPCS 726
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
AS+ V D I RVGAGD QL+G+STFM EMLETA+IL+ A+ SLIIIDELGRGTSTYD
Sbjct: 727 EASLPVFDSILCRVGAGDSQLKGISTFMAEMLETATILRSASKDSLIIIDELGRGTSTYD 786
Query: 753 GFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI--- 809
GFGLAWAI EH+ +IRA LFATHFHELTAL E + V N HV AH+
Sbjct: 787 GFGLAWAISEHIASKIRAFCLFATHFHELTALDQE---------ITHVKNLHVVAHVSKS 837
Query: 810 --DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT------- 860
++ R +T+LYKVEPG CDQSFGIHVAE ANFPE+VV LA+ KA ELEDF
Sbjct: 838 DENTRDRDITLLYKVEPGVCDQSFGIHVAELANFPENVVKLAKRKADELEDFNTAEERQG 897
Query: 861 ----PSAVISDDAKI 871
P+ VI + KI
Sbjct: 898 DLELPANVIEEGTKI 912
>gi|301611824|ref|XP_002935427.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2,
partial [Xenopus (Silurana) tropicalis]
Length = 878
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/917 (41%), Positives = 548/917 (59%), Gaps = 74/917 (8%)
Query: 24 FYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVS 81
FY+++P DT VR FDR DYYT HG +A F AK + T ++ LG+GS L SV +S
Sbjct: 1 FYQSMPEKPDT-TVRVFDRNDYYTVHGGDAIFAAKEVFKTNGVIKYLGSGSKKLESVVLS 59
Query: 82 KNMFETIARDLLLERTDHTLELYEG-SG------SNWRLVKSGTPGNLGSYEDVLFANNE 134
K FE++ +DLLL R + +E+Y+ SG ++W+L +PGNL +E++LF N++
Sbjct: 60 KMNFESVVKDLLLVR-QYRVEVYKNKSGGKSSKENDWQLAFKASPGNLTQFEEILFGNSD 118
Query: 135 MQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
M +V + E +G+GYVD T R LG+ EF D+ F+N+E+ LV +G KEC+
Sbjct: 119 MSTAVGVVGIKLVSAEGQRLVGVGYVDSTLRKLGVCEFPDNDQFSNLEALLVQIGPKECV 178
Query: 195 LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGF 254
+P + + LR + R G+++T+RKK EF T+D VQDL+RL++ + + S
Sbjct: 179 MPG-GDTAGDMGKLRQIVKRGGILITDRKKAEFTTKDSVQDLNRLLKA--KKGEQVTSAA 235
Query: 255 ------EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT 308
++A AL +++ Y ELLSDESN+G + + + L YM+LD+AA+ ALN+
Sbjct: 236 LPEMEKQVAMSALASVMKYLELLSDESNFGQFVMTNFDLSQYMKLDNAAVGALNLFP--- 292
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
PL+D N I RL++V+AFV D LRQ L+
Sbjct: 293 -------------------------------PLMDKNRIEERLNLVEAFVTDAELRQCLQ 321
Query: 369 QH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
+ L+R D+ RL +++ A LQ +LYQ+ +LP + A+++YEG L+ +
Sbjct: 322 EDLLRRFPDLNRLAKKFQRQTANLQDCYRLYQAVNQLPGVIQAIEKYEGTHQMLLLAVFA 381
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
PL L+ D +KF ++ET++D+DQ+EN E+++ +S+D L+ L+ + LE+ + +
Sbjct: 382 TPLSDLSSD--FSKFQEMIETTLDMDQVENHEFLVKASFDPNLTELREKMNELEKNMQAA 439
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
A +L L K++KL+ +Q GH FR+T KEE +R +F ++ +K+GV+FTN
Sbjct: 440 LNGAARELGLDAGKSIKLESNSQVGHFFRVTCKEEKALRN--NKKFTTIDIQKNGVRFTN 497
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
KL L ++Y + EEY+ Q +V +I + + + ++L ++++LD +SFA +++
Sbjct: 498 GKLSSLSEEYMRNREEYEEAQNAIVKEIISISAGYVDPIQTLNDVIAQLDAAVSFAYVSN 557
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMG 667
S P PY RP I G I+L+ +RHPC+E QD V FIPND + K F IITGPNMG
Sbjct: 558 SAPVPYVRPVILEKGQGKIMLQSARHPCIEMQDDVAFIPNDITFEKEKQMFHIITGPNMG 617
Query: 668 GKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
GKST+IRQ GV +LMAQ+GSFVPCD A IS+ DCI ARVGAGD QL+GVSTFM EMLETA
Sbjct: 618 GKSTYIRQTGVIVLMAQIGSFVPCDSAEISIVDCILARVGAGDSQLKGVSTFMAEMLETA 677
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHE 787
SIL+ AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ +I+A +FATHFHELTALA
Sbjct: 678 SILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIKAFCMFATHFHELTALAD- 736
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
Q+ V N HV+ + + Y G CDQSFGIHVAE ANFP+ V+
Sbjct: 737 --------QVPTVNNLHVTXXXSQHNYSDFVFYFFX-GVCDQSFGIHVAELANFPKHVIE 787
Query: 848 LAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLET 907
A+EKA +LE+F DD E KR+ + G FL +PL
Sbjct: 788 TAKEKALQLEEFQFVGN-PDDCDDEPTRKRR----CKEKEEGEKIIQDFLSRVKALPLTE 842
Query: 908 MDLKEALERVKRMKDDL 924
M +E ++++ + D+
Sbjct: 843 MSEEEIKSKLQQFRSDV 859
>gi|353237857|emb|CCA69819.1| probable DNA mismatch repair protein MSH2 [Piriformospora indica
DSM 11827]
Length = 926
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/857 (42%), Positives = 540/857 (63%), Gaps = 33/857 (3%)
Query: 20 GFLSFYKTLP---NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALS 76
GF +++ LP +DT VR F+R DYYTAHG +A FIA+ Y T + ++ LG + L
Sbjct: 11 GFCAWFSKLPAKRDDT--VRLFERGDYYTAHGADAHFIAQEVYRTNSVIKSLGKKAAPLP 68
Query: 77 SVSVSKNMFETIARD-LLLERTDHTLELYEG---SGSNWRLVKSGTPGNLGSYEDVLFAN 132
SV++S + + RD L +++ + + EG S + + L + +PGNL ED++FAN
Sbjct: 69 SVTLSSTLAKEFLRDALTIKQLKIEIWVPEGGKKSAAKFELSRQASPGNLQEVEDLIFAN 128
Query: 133 NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE 192
+M P+++++ +N TIG + D T R +G+++F ++ F N+ES +V LG KE
Sbjct: 129 TDMTTAPIVLSIRIAKVDNIRTIGTAFADATIRKIGVSQFAENDLFGNLESLIVQLGVKE 188
Query: 193 CLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLV 251
C++ TE + + LR L RC ++TERK EF T+D+ QDL RL+ G+ + V
Sbjct: 189 CIMQTEGKTADYDLSKLRQVLERCNTVVTERKPVEFSTKDVEQDLTRLLSGNQQVTALPV 248
Query: 252 SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD-A 310
+A A L+ Y +L+ D SN+G+Y + +Y L YMRLD++A++AL +L D A
Sbjct: 249 FDLRVAMSATAGLIRYLDLMRDSSNFGHYTLSQYDLGQYMRLDASAIQALTLLPGPGDSA 308
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ- 369
KN S+ GL+N+ C G RLL WLK PL++++EIN RL++V+ FV D++ R+ L+
Sbjct: 309 TKNTSVLGLLNK-CKTAQGGRLLGQWLKLPLVNLHEINRRLNLVEIFVKDSSSRRALQDD 367
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQF---SSLIKERY 426
L+ + D+ R+ K+ A L+ ++++YQ++IR+P + L + + S LI E+Y
Sbjct: 368 FLRYMPDMHRICKRFHKKVASLEDVIRVYQAAIRVPDLIEKLNDIDTEEYADSVLIAEQY 427
Query: 427 LDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
+ DD++ KF +VE ++DLDQL+N +Y+I YD L +L ++ + +
Sbjct: 428 TTAFQKF--DDNITKFKEMVEQTIDLDQLKNHQYIIKPDYDEQLQSLADQIAEVVSALDE 485
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
H++ + DL L +DK L L+ G+ FR++K + + KK + L T+K GV FT
Sbjct: 486 EHERVSRDLGLDMDKKLHLENNPTHGYCFRVSKNDSKVVEKK--KDYTELSTQKAGVLFT 543
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK+ +Y ++ E Y Q LV V+ A ++ + +++ +++ LDV++SFA ++
Sbjct: 544 TKTLKRHSVEYSELRERYNRVQSTLVAEVVSIASGYTPVLEAVDDIIAHLDVIVSFAHVS 603
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNM 666
++ P+ Y +P + G+++L+ +RHPC+E Q+ ++FIPND ++IRGKS F IITGPN
Sbjct: 604 ANAPSNYVKPVVTEKGTGNLLLKEARHPCLEVQEDISFIPNDVEMIRGKSEFHIITGPNT 663
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GGKST+ RQ+GV LMAQVG FVPC+ A I + DCI ARVGAGD QL+GVSTFM EMLE+
Sbjct: 664 GGKSTYARQIGVIALMAQVGCFVPCESAEIPIFDCILARVGAGDSQLKGVSTFMAEMLES 723
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
A+ILK AT SLIIIDELGRGTST DGFG+AWAI E++ IRA LFATHFHELT L
Sbjct: 724 AAILKTATPNSLIIIDELGRGTSTADGFGIAWAISEYIATTIRAFCLFATHFHELTTL-- 781
Query: 787 ENANEFNTKQMVGVANYHVSAHID----STSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
++Q+ V N HV AH+ S +++T+LYKVE G DQSFGIHVA+ NFP
Sbjct: 782 -------SQQIPHVKNAHVVAHVSEGEGSKEKEITLLYKVEEGPSDQSFGIHVAQLCNFP 834
Query: 843 ESVVTLAREKAAELEDF 859
ESVV A+ KA ELEDF
Sbjct: 835 ESVVKHAKRKAEELEDF 851
>gi|348508792|ref|XP_003441937.1| PREDICTED: DNA mismatch repair protein Msh2-like [Oreochromis
niloticus]
Length = 937
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/935 (41%), Positives = 563/935 (60%), Gaps = 48/935 (5%)
Query: 11 LKLDAKQARGFLSFYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
L +D+ GFL+F ++P DT R FDR DYYT HG++A F AK + T ++ L
Sbjct: 9 LSMDSAAEHGFLNFIFSMPEKPDT-TFRIFDRNDYYTVHGKDAIFAAKEVFKTNGVIKYL 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS-----NWRLVKSGTPGNLG 123
G+GS L SV +SK FE A+DLLL R + +E+Y +W++ +PGNL
Sbjct: 68 GSGSRKLESVVLSKLNFEAFAKDLLLVR-QYRVEVYRNHSKSSKEHDWKIEYKASPGNLT 126
Query: 124 SYEDVLFANNEMQD--TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+E++LF + V+ + +G+GYVD +R +G+ EF D+ F+N+
Sbjct: 127 QFEEILFGGGSGAEGCAGVVAVRLATGADGQRVVGVGYVDAAQRTMGVCEFPDNEIFSNL 186
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
ES LV + KECLL + K LR+ + R G+++++RK+ EF ++D+VQDL+RL+R
Sbjct: 187 ESLLVQISPKECLLAHGEANADGSK-LREVVQRGGMLVSDRKRAEFNSKDMVQDLNRLLR 245
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
+ P D ++A L A++ + ELLSDESN+ ++ + L YMRL
Sbjct: 246 AKRGETVASNTLPELDK----QVAMSCLAAVVRFLELLSDESNFNSFSLTTLDLGQYMRL 301
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D+AA+RALN+ + S D SL GL+N+ C G+RL++ W+KQPL+D +I RLD
Sbjct: 302 DNAAVRALNLFQGSPDDTTGAHSLAGLLNK-CRTPQGQRLVNQWIKQPLMDKTKIEERLD 360
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V++FV D+ LRQ + L +R D+ RL + A LQ ++YQ+ ++P + +AL
Sbjct: 361 LVESFVCDSVLRQTCQDDLLRRFPDLHRLAKKFHRHTATLQDCYRVYQAVSQIPTLITAL 420
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++Y G + L+ +L PL L D K+ ++ET++D++Q+++ EY++ +S+D LS
Sbjct: 421 ERYSGSYKVLLNAVFLSPLRDLQTD--FTKYQEMIETTLDMNQIDHHEYLVKASFDPVLS 478
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + + LE+ + ++ A L L K +KL+ G R+T KEE +R
Sbjct: 479 ELREKMDVLEKSMQAVLNSAARQLGLEAGKTVKLESNAVLGFYLRVTCKEEKSLRN--NK 536
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F L+ +K+GV+FTN+KL L +QY K EEY+ Q +V +I A + + ++L+
Sbjct: 537 NFTTLDVQKNGVRFTNSKLSSLNEQYTKSREEYEEAQNAIVKEIINIASGYVDPLQTLSD 596
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE--GSRHPCVEAQDWVNFIPNDC 649
++++LD + SFA + S P P+ RP D G +E +RHPC+E FIPND
Sbjct: 597 VIAQLDAMASFAVASVSAPVPFVRPRFRLLDHGCRRMELLQARHPCMEMDADTAFIPNDI 656
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
++ F IITGPNMGGKSTFIRQVGV LMAQ+G FVPC++A +SV D I ARVGAG
Sbjct: 657 SFVQEDKSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSILARVGAG 716
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D Q++GVSTFM EMLETA+IL+ AT++SLIIIDELGRGTSTYDGFGLAWAI EH+ +I
Sbjct: 717 DSQVKGVSTFMSEMLETAAILRSATEKSLIIIDELGRGTSTYDGFGLAWAISEHISSKIG 776
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQ 829
LFATHFHELTALA Q V N HV+A ++ LTMLY+V+PG CDQ
Sbjct: 777 CFCLFATHFHELTALA---------AQQPTVHNLHVTAL--TSHNTLTMLYRVKPGVCDQ 825
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG 889
SFGIHVAE A FP SV+ A+EKA ELE+F A + + E +KR+R D G
Sbjct: 826 SFGIHVAELACFPPSVLAAAKEKAEELEEFQEPAGDMSEQEEEPEAKRRR----TDKQVG 881
Query: 890 AARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL++ +PL TM +E +++MK L
Sbjct: 882 ENLIQKFLQKVKSLPLATMAEEEVKAELRKMKRKL 916
>gi|426194636|gb|EKV44567.1| hypothetical protein AGABI2DRAFT_187339 [Agaricus bisporus var.
bisporus H97]
Length = 966
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/902 (41%), Positives = 551/902 (61%), Gaps = 79/902 (8%)
Query: 20 GFLSFYKTLPN---DTRAVRFFDRRD----YYTAHGENATFIAKTYYHTTTALRQLGTGS 72
GFL F+ +LP +T +R F+R +Y A+G +A F+A+ +HT + ++ LG G+
Sbjct: 19 GFLDFFNSLPKKSPETGTLRLFNRTSGGDSFYCAYGPDAVFVAQHVFHTKSVIKYLGAGA 78
Query: 73 DALSSVSVSKNMFETIARDLLLERTDHTLELYEG------SGSNWRLVKSGTPGNLGSYE 126
L SV++ ++ + + R+ L + +E+YE G+ +RL K +PGNL + E
Sbjct: 79 RRLESVTLKVSVAQMLLREALTSK-QLRVEIYESENGHGKKGTTFRLDKEASPGNLQAVE 137
Query: 127 DVLFANNEMQDTPVIVAL----FP----NFRENGCTIGLGYVDLTKRVLGLAEFLDDSHF 178
D+LF N+++ PV++A+ P + + IG+ + D + R LG+A+F+D+ F
Sbjct: 138 DLLFVNSDILSAPVVMAIQLANVPVSATGVKSSHKAIGVAFADTSVRELGVADFIDNDIF 197
Query: 179 TNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
+N ES ++ L KE +LPT + + ++ L RCGV++TERK +EF+++++
Sbjct: 198 SNTESLIIQLSVKEAILPTGTSAGTTERDIDLNKMKGVLERCGVVITERKPSEFRSKNIA 257
Query: 234 QDLDRLVRGSVEPVRDLVSGFEI-------APGALGALLSYAELLSDESNYGNYYIRKYS 286
DL RL++ S PV + I AP AL AL+ Y LL+D+SN G+Y +R +
Sbjct: 258 DDLPRLLQ-SQSPVSTADASATISQLSLPTAPAALSALVQYLSLLTDDSNLGSYKLRTHD 316
Query: 287 LDSYMRLDSAAMRALNVLESKTDAN---KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
L YM+LD++A+RALN+ E+ KN +L GL+N+ C G RLL W+KQPL++
Sbjct: 317 LSQYMKLDASALRALNLTENSGTVGLGAKNTTLLGLLNK-CKTSQGTRLLGTWIKQPLVN 375
Query: 344 VNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
++ I R ++V+ F +++ RQ L+ ++LK + D++RL ++ A L+ +V++YQ +
Sbjct: 376 LHGIRKRQNLVEIFTNESTTRQILQDEYLKVMPDLQRLGKRFKRGNASLEDVVRIYQVVL 435
Query: 403 RLPYIRS---ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGE 459
+LP + + A+Q + + I E YL L+ D HL K+ +VE ++DLD+L+N
Sbjct: 436 KLPGMITSLEAVQMVSQDYQAAIDEAYLSSLKE--HDSHLKKYSEMVEATLDLDELDNHN 493
Query: 460 YMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITK 519
Y+I YD L L + + + + S H DL++ +DK L L+ +G+ FR+TK
Sbjct: 494 YVIKPDYDERLQQLAEKLKRVRDGLDSEHTVVGDDLNIELDKKLHLENNQVYGYCFRLTK 553
Query: 520 KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
+ K L+ +FI L T K GV FT LK L ++Y+ + + Y Q LV V+ A
Sbjct: 554 TDA----KGLSKKFIELGTNKSGVYFTTKTLKNLAEEYKDLTQTYARTQNGLVKEVVNIA 609
Query: 580 VTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV---------------- 623
T++ + ++L +++ LDV+LSFA ++ S P PY +P + +
Sbjct: 610 ATYAPVLETLDNVVAHLDVILSFAHVSVSAPIPYIKPTLLDKGIAFLSCGQYLAEYFEGS 669
Query: 624 GDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
G+++L +RHPC+E QD +NFIPND ++++ +S FQIITGPNMGGKST+IRQVGV LMA
Sbjct: 670 GNLVLREARHPCLEVQDEINFIPNDIEMVKDRSEFQIITGPNMGGKSTYIRQVGVIALMA 729
Query: 684 QVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDE 743
Q+G FVPC+ A + V D + RVGAGD QL+GVSTFM EMLETA+IL+ A+ SLIIIDE
Sbjct: 730 QIGCFVPCEEAQLPVFDSVLCRVGAGDSQLKGVSTFMAEMLETATILRSASKDSLIIIDE 789
Query: 744 LGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANY 803
LGRGTSTYDGFGLAWAI EH+ +I A LFATHFHELTAL +Q+ V N
Sbjct: 790 LGRGTSTYDGFGLAWAISEHIATKIHAFCLFATHFHELTAL---------DQQLSHVKNL 840
Query: 804 HVSAHIDSTS-----RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
HV AH+ R +T+LYKVEPG DQSFGIHVAE ANFPE+VV LA+ KA ELED
Sbjct: 841 HVVAHVTQNGSNIRDRDITLLYKVEPGISDQSFGIHVAELANFPENVVKLAKCKADELED 900
Query: 859 FT 860
FT
Sbjct: 901 FT 902
>gi|400601702|gb|EJP69327.1| DNA mismatch repair protein MSH2 [Beauveria bassiana ARSEF 2860]
Length = 925
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/881 (43%), Positives = 540/881 (61%), Gaps = 58/881 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELKLD + GF+ F+K+LP ND VR FDR D+YT+HG++A +IA T Y TT+ +R
Sbjct: 5 PELKLDDEG--GFIRFFKSLPAVNDD-TVRIFDRGDWYTSHGDDANYIANTVYKTTSVVR 61
Query: 67 QLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLG 123
QLG L SV+++ +F R+ L + +E+++ S NW+ +K +PGNL
Sbjct: 62 QLGRNDHTGLPSVTMTVTVFRQFLREALF-KLGRRVEIWQSSNGRMNWKCIKQASPGNLQ 120
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
ED L +++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N E
Sbjct: 121 DVEDDL--GGQVESAPMIMAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFE 178
Query: 183 SALVALGCKECLLP---TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
+ L+ LG +ECLLP +E K E LR + CGV + ER +F RD+ QDL RL
Sbjct: 179 ALLIQLGVRECLLPQDKSEKDKDPELAKLRQIIDNCGVAIAERPANDFGIRDIDQDLARL 238
Query: 240 VRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
++ + P DL ++A G+ +L+ Y +L D SN+G Y + ++ L +M+LD+
Sbjct: 239 LKDEKATGLLPQTDL----KLAMGSASSLIKYLGILQDVSNFGQYQLYQHDLAQFMKLDA 294
Query: 296 AAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQ 355
AA++ALN++ D K S++G++N C +G RLL WLKQPL+ EI R +V+
Sbjct: 295 AALKALNLMPGPRDGAKTMSIYGVLNH-CKTPVGSRLLAQWLKQPLMKKEEIEKRQQLVE 353
Query: 356 AFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
AF DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP +
Sbjct: 354 AFYTDTELRQTMQETHLRSVPDLYRLSKRFQRGKANLEDVVRAYQVVIRLP-------GF 406
Query: 415 EGQFSSLIKERYLDPLE-----SLTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDT 468
G ++ E Y DPL+ L D D L + +VE +VDL+ L+ EY+I YD
Sbjct: 407 IGTLEGVMDETYRDPLDEAYTTKLRDLSDSLGRLQDMVEQTVDLNALDRHEYIIKPDYDA 466
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKIRK 527
GL ++ + + L+R I + A DLD DK + L+ + G R+T++E IR
Sbjct: 467 GLRIIRKKLDQLDRSIREEFNEAAHDLDQEADKKIFLETSHKVHGVCMRLTRQEAGCIRN 526
Query: 528 KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFK 587
K +++ T+K+GV FT KL+ ++ ++ + Y Q LV+ V+Q A ++ + +
Sbjct: 527 K--SKYQECSTQKNGVYFTTKKLQAYRREHDQLSQNYNRTQSGLVHEVVQVAASYCPVLE 584
Query: 588 SLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPN 647
LA +L+ LDV++S A + + P Y RP I+P G L G+RHPC+E QD V FI N
Sbjct: 585 RLAGVLAHLDVIVSLAHCSVNAPEAYVRPTIHPRGQGQTRLLGARHPCLELQDDVQFITN 644
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
D L R S F IITGPNMGGKST+IRQVG LMAQVG FVPC A +++ D I ARVG
Sbjct: 645 DVTLTRDTSSFLIITGPNMGGKSTYIRQVGAIALMAQVGCFVPCAEAELTIFDAILARVG 704
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
A D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+++E
Sbjct: 705 ASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIIKE 764
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI--------DSTSRKLTML 819
IR +FATHFHELTALA ++ + VAN HV+AHI + R++T+L
Sbjct: 765 IRCFAMFATHFHELTALADQHPH---------VANLHVTAHIGGAGGDGAKADKREVTLL 815
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
YKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 816 YKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 856
>gi|340518853|gb|EGR49093.1| DNA mismatch repair protein [Trichoderma reesei QM6a]
Length = 922
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/935 (41%), Positives = 550/935 (58%), Gaps = 61/935 (6%)
Query: 20 GFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD-ALSS 77
GF+ F+K+LP+ AVR FDR D+YTAHG +A FIAKT Y TT+ +RQLG L S
Sbjct: 7 GFIRFFKSLPDIGDDAVRIFDRGDWYTAHGSDAMFIAKTVYKTTSVVRQLGKNDHTGLPS 66
Query: 78 VSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGSYEDVLFANNEM 135
V++S +F R+ L + +E+++ NW+ VK +PGNL ED L ++
Sbjct: 67 VTISTTVFRQFLREALF-KLGKRVEIWQSPSGRMNWKCVKQASPGNLQDVEDEL--GGQI 123
Query: 136 QDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N+ES ++ LG +ECL
Sbjct: 124 DSAPMIMAIKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNLESLIIQLGVRECL 183
Query: 195 LP-----TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRD 249
+ E K E +R + CGV L ER +F +D+ QDL RL++
Sbjct: 184 IQYEKGDREKEKDPELAKIRQIINNCGVALAERPAGDFGIKDIEQDLARLLKDEKSVAML 243
Query: 250 LVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+ ++A G+ L+ Y L D SN+G Y + ++ L YM+LD+AA++ALN++ D
Sbjct: 244 PQTDLKLAMGSAACLIKYIGALQDASNFGQYQLYQHDLAHYMKLDAAALKALNLMPGPRD 303
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
+K S++G++N C +G RLL WLKQPL+ +EI R +V+AF DT LRQ +++
Sbjct: 304 GSKTMSIYGVLNH-CKTPVGSRLLAQWLKQPLMSKDEIEKRQQLVEAFFTDTELRQTMQE 362
Query: 370 -HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLD 428
HL+ + D+ RL ++ +A L+ +V+ YQ IRLP + G ++ E Y D
Sbjct: 363 EHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLP-------GFIGTLEGVMDEAYKD 415
Query: 429 PLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
PL+ + D L K +VE +VDLD L+ EY+I YD L ++ + + L+R
Sbjct: 416 PLDDAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLRIIRKKLDQLDR 475
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
I A DLD DK + L+ + G R+T++E IR K ++++ T+K+
Sbjct: 476 DIRQEFNNAARDLDQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGK--SKYLECSTQKN 533
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
GV FT +L+ ++ ++ + Y Q LVN V+Q A ++ + + LA +L+ LDV++S
Sbjct: 534 GVYFTTKQLQAYRREHDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLAGVLAHLDVIVS 593
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQII 661
+ A P Y RP I+P G L +RHPC+E QD V FI ND +L R KS F II
Sbjct: 594 LSHAAVHAPEAYVRPKIHPRGEGQTKLTAARHPCMELQDDVQFITNDVELTRDKSSFLII 653
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKST+IRQ GV LMAQVGSFVPC A +++ D I ARVGA D QL+GVSTFM
Sbjct: 654 TGPNMGGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASDSQLKGVSTFMA 713
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI +FATHFHEL
Sbjct: 714 EMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHEL 773
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTS---------RKLTMLYKVEPGACDQSFG 832
TALA Q V N HV+AHI T+ R++T+LYKVEPG CDQSFG
Sbjct: 774 TALA---------DQYPQVKNMHVTAHISGTNSGGDDVNAKREVTLLYKVEPGICDQSFG 824
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAAR 892
IHVAE FP+ VV +A+ KA ELEDFT +D + ++ D+ +G+A
Sbjct: 825 IHVAELVRFPDKVVRMAKRKADELEDFTTK---HEDLGVSYSTE--------DVEQGSAM 873
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
+ L E+ D + L E+V ++K+ + D
Sbjct: 874 LKKVLVEWKD-AVRNGGLVSKEEQVAKLKELVAAD 907
>gi|342874150|gb|EGU76220.1| hypothetical protein FOXB_13292 [Fusarium oxysporum Fo5176]
Length = 927
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/882 (43%), Positives = 539/882 (61%), Gaps = 58/882 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELKLD + GF+ FYK+LP + +R FDR D+YT+HG++AT+IAKT Y TT+ +RQ
Sbjct: 5 PELKLDDEG--GFIRFYKSLPAVNEDTIRIFDRGDWYTSHGQDATYIAKTVYKTTSVVRQ 62
Query: 68 LGTGS-DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG L SV+++ +F R+ LL + +E+++ NW+ +K +PGNL
Sbjct: 63 LGRNDHSGLPSVTMTMTVFRQFLREALL-KLGKRVEIWQSPSGRMNWKCIKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L +++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDDL--GGQVESAPMILAVKISTKASEARNVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLL---PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG +ECL+ +E K E L+ + CGV + ER +F TRD+ QDL RL+
Sbjct: 180 LLIQLGVRECLIQIDKSEKEKDPELSKLKKIIDNCGVAIAERPAGDFGTRDIEQDLARLL 239
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ S+ P DL ++A G+ +L+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 240 KDERSASLLPQTDL----KLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAHFMKLDAA 295
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D +K S+FG++N C +G RLL WLKQPL+ EI R +V+A
Sbjct: 296 ALKALNLMPGPRDGSKTMSIFGVLNH-CKTPVGSRLLAQWLKQPLMSKTEIEKRQQLVEA 354
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F DT LRQ L++ HL+ I D+ RL ++ +A L+ +V+ YQ IRLP +
Sbjct: 355 FYVDTELRQTLQEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLP-------GFI 407
Query: 416 GQFSSLIKERYLDPLE-----SLTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G F ++ E Y DPL+ L D D L K +VE +VDLD L+ EY+I + +D
Sbjct: 408 GTFEGVMDENYKDPLDEAYTIKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKADFDKS 467
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKIRKK 528
L ++ + + L++ I + +A DL DK + L+ + G R+T++E IR
Sbjct: 468 LRIIRKKLDQLDKDIRAEFTASAKDLGQDPDKKIFLETSHKVHGVCMRLTRQEAGCIRN- 526
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+++ T+K+GV FT KL+ +Y ++ + Y Q LV+ V+Q A ++ + +
Sbjct: 527 -NSKYQECSTQKNGVYFTTKKLQAYRREYDQLSQNYNRTQSSLVHEVVQVASSYCPVLER 585
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPND 648
LA +L+ LDV++S + + P Y RP I+ G IL +RHPC+E QD V FI ND
Sbjct: 586 LAGVLAHLDVIVSLSHASVHAPESYVRPKIHARGEGQTILREARHPCMELQDDVQFITND 645
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
+L R KS F IITGPNMGGKST+IRQ GV LMAQVG FVPC A +++ D I ARVGA
Sbjct: 646 IELTRDKSSFLIITGPNMGGKSTYIRQTGVIALMAQVGCFVPCAEAELTIYDSILARVGA 705
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 706 SDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEI 765
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS----------RKLTM 818
+FATHFHELTALA Q V N HV+AHI TS R++T+
Sbjct: 766 GCSAMFATHFHELTALA---------DQYPQVQNLHVTAHIGGTSAAATSEADAKREVTL 816
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
LYKV PG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 817 LYKVAPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 858
>gi|391871877|gb|EIT81026.1| mismatch repair ATPase MSH2 [Aspergillus oryzae 3.042]
Length = 934
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/880 (42%), Positives = 544/880 (61%), Gaps = 55/880 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDT--RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ FY++L ++ +R FDR D+Y+AHG A FIA+T Y TT+ LR
Sbjct: 5 PELKVDDEV--GFIRFYRSLAANSNDETIRVFDRGDWYSAHGAEAEFIARTVYKTTSILR 62
Query: 67 QLG-TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS---NWRLVKSGTPGNL 122
LG + S L SV++S +F R+ L R + +E++ G+ +W+LVK +PGNL
Sbjct: 63 NLGRSDSGGLPSVTMSVTVFRNFLREALF-RLNKRIEIWGSVGTGKGHWKLVKQASPGNL 121
Query: 123 GSYEDVL--FANNEMQDTPVIVALFPNFRE-NGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
E+ L M P+I+A+ + + ++G+ + D + R LG++EFLD+ ++
Sbjct: 122 QDVEEELGSVGGLSMDSAPIILAVKISAKAAEARSVGVCFADASVRELGVSEFLDNDIYS 181
Query: 180 NVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N ES ++ LG KECL+ +A K E +R CG+ ++ER ++ +D+ QDL R
Sbjct: 182 NFESLIIQLGVKECLVQMDANKKDVELGKIRAIADSCGIAISERPVADYGVKDIEQDLTR 241
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L+R + ++A G+ AL+ Y +++D +N+G Y + ++ L +M+LDS+A+
Sbjct: 242 LLRDERSAGTLPQTELKLAMGSASALIKYLGVMTDPTNFGQYQLYQHDLSQFMKLDSSAL 301
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
RALN++ D +K+ SLFGL+N C +G RLL PL+D+ EI R +V+AFV
Sbjct: 302 RALNLMPGPRDGSKSMSLFGLLNH-CKTPVGSRLL------PLMDLAEIEKRQQLVEAFV 354
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
+T LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ +IRLP ++L+
Sbjct: 355 VNTELRQTMQEEHLRSIPDLYRLAKRFQRKQANLEDVVRVYQVAIRLPGFVNSLE----- 409
Query: 418 FSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++ E Y PLE+ + D L K +VET+VDLD LEN E++I +D L
Sbjct: 410 --NVMDEEYQTPLETEYTSNLRSHSDSLAKLEEMVETTVDLDALENHEFIIKPEFDESLR 467
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
++ + + L + H++ A DLD ++K L L+ G FR+T+ E IR K
Sbjct: 468 IIRKKLDKLRHDMGVEHRRVARDLDQDIEKKLFLENHRVHGWCFRLTRNESGCIRNK--R 525
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
++ T+K+GV FT + ++ L ++ ++ Y Q LVN V+ A ++ + + LA
Sbjct: 526 EYQECSTQKNGVYFTTSTMQTLRREHDQLSSNYNRTQTGLVNEVVNVAASYCPVLERLAG 585
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+++ LDV++SFA + PTPY RP ++P G+ +L+ +RHPC+E QD ++FI ND L
Sbjct: 586 VIAHLDVIVSFAHASVHAPTPYARPKMHPRGTGNTVLKEARHPCMEMQDDISFITNDVAL 645
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+R +S F IITGPNMGGKST+IRQ+GV LMAQ G FVPC A +++ DCI ARVGA D
Sbjct: 646 VRDESSFLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCTEAELTIFDCILARVGASDS 705
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLET++ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EIR
Sbjct: 706 QLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIVTEIRCF 765
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI------DSTSRK-----LTMLY 820
LFATHFHELTALA V N HV A I DS +K +T+LY
Sbjct: 766 GLFATHFHELTALADRYPK--------SVKNLHVVAFIGDGTDDDSEDKKSKRNQVTLLY 817
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
+VEPG CDQSFGIHVAE FPE VV +AR+KA ELEDFT
Sbjct: 818 RVEPGICDQSFGIHVAELVRFPEKVVNMARQKAEELEDFT 857
>gi|358385712|gb|EHK23308.1| hypothetical protein TRIVIDRAFT_36626 [Trichoderma virens Gv29-8]
Length = 925
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/876 (43%), Positives = 528/876 (60%), Gaps = 48/876 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + GF+ F+K+LPN AVR FDR D+YT+HG +A FIAKT Y TT+ +RQ
Sbjct: 5 PELKVDDEG--GFIRFFKSLPNLGEDAVRIFDRGDWYTSHGNDAMFIAKTVYKTTSVVRQ 62
Query: 68 LGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG L SV+++ +F R+ L + +E+++ S NW+ +K +PGNL
Sbjct: 63 LGKNDHTGLPSVTLTTTVFRQFLREALF-KLGKRVEIWQSSSGRMNWKCIKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L ++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDEL--GGQIDSAPMIMAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLLP-----TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
L+ LG +ECL+ E K E +R + CGV L ER +F +D+ QDL R
Sbjct: 180 LLIQLGVRECLIQYEKGDREKEKDPELAKIRQIINNCGVALAERPAGDFGIKDIEQDLTR 239
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ + ++A G+ L+ Y L D SN+G Y + ++ L YM+LD+AA+
Sbjct: 240 LLKDEKSVAMLPQTDLKLAMGSAACLIKYIGALQDVSNFGQYQLYQHDLAQYMKLDAAAL 299
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
+ALN++ D +K S++G++N C +G RLL WLKQPL+ +EI R +V+AF
Sbjct: 300 KALNLMPGPRDGSKTMSIYGVLNH-CKTPVGSRLLAQWLKQPLMSKDEIERRQQLVEAFY 358
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP + G
Sbjct: 359 TDTELRQTMQEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLP-------GFIGT 411
Query: 418 FSSLIKERYLDPLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++ E Y DPL+ + D L K +VE +VDLD L+ EY+I YD L
Sbjct: 412 LEGVMDEAYKDPLDDAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLR 471
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKIRKKLT 530
++ + + L+R I A DLD DK + L+ + G R+T++E IR K
Sbjct: 472 VIRKKLDQLDRDIRQEFHSAARDLDQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGK-- 529
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+++ T+K+GV FT +L+ ++ ++ + Y Q LVN V+Q A ++ + + LA
Sbjct: 530 SKYQECSTQKNGVYFTTKQLQAYRREHDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLA 589
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L+ LDV++S + A P Y RP ++ G L G+RHPC+E QD V FI ND
Sbjct: 590 GVLAHLDVIVSLSHAAVYAPEAYVRPKMHTRGEGQTKLTGARHPCMELQDDVQFITNDVD 649
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L R KS F IITGPNMGGKST+IRQ GV LMAQVGSFVPC A +++ D I ARVGA D
Sbjct: 650 LTRDKSSFLIITGPNMGGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASD 709
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 710 SQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGC 769
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS------RKLTMLYKVEP 824
+FATHFHELTALA Q V N HV+AHI T+ R++T+LYKVEP
Sbjct: 770 FAMFATHFHELTALA---------DQYPQVKNMHVTAHISGTNGDVNAKREVTLLYKVEP 820
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
G CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 821 GICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 856
>gi|358394352|gb|EHK43745.1| hypothetical protein TRIATDRAFT_127655 [Trichoderma atroviride IMI
206040]
Length = 925
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/876 (43%), Positives = 530/876 (60%), Gaps = 48/876 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELKLD + GF+ +K+LP+ AVR FDR D+YTAHGE+A FIAKT Y TT+ +RQ
Sbjct: 5 PELKLDDEG--GFIRLFKSLPDIGADAVRIFDRGDWYTAHGEDALFIAKTVYKTTSVVRQ 62
Query: 68 LGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG L SV+++ +F R+ L + +E+++ S NW+ +K +PGNL
Sbjct: 63 LGKNDHTGLPSVTMTMTVFRQFLREALF-KLGKRVEIWQSSSGRMNWKCIKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L ++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDEL--GGQIDSAPMIMAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLL-----PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
L+ LG +ECL+ E + E LR + CGV L ER +F +D+ QDL R
Sbjct: 180 LLIQLGIRECLIQYDKNEKEKERDPELAKLRQVINNCGVALAERPAGDFGIKDIEQDLAR 239
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
L++ + ++A G+ L+ Y L D SN+G Y + ++ L YM+LD+AA+
Sbjct: 240 LLKDEKSVAMLPQTDLKLAMGSAACLIKYIGALQDPSNFGQYQLYQHDLAQYMKLDAAAL 299
Query: 299 RALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
+ALN++ D +K S++G++N C +G RLL WLKQPL+ EI R +V+AF
Sbjct: 300 KALNLMPGLRDGSKTMSIYGVLNH-CKTPVGSRLLAQWLKQPLMSKIEIEKRQQLVEAFF 358
Query: 359 DDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
DT LRQ +++ HL+ + D+ RL ++ +A L+ +V+ YQ IRLP + G
Sbjct: 359 TDTELRQTMQEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLP-------GFIGT 411
Query: 418 FSSLIKERYLDPL-ESLTD-----DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++ E Y DPL E+ T+ D L K +VE +VDLD L+ EY+I YD L
Sbjct: 412 LEGIMDEAYKDPLDEAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLR 471
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKIRKKLT 530
++ + + L+ I + A DL DK + L+ + G R+T++E IR K
Sbjct: 472 VIRKKLDRLDHDIRQEFQSAARDLGQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGK-- 529
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
++++ T+K+GV FT +L+ +Y ++ + Y Q LVN V+Q A ++ + + LA
Sbjct: 530 SKYLECSTQKNGVYFTTKQLQAYRREYDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLA 589
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L+ LDV++S + A P Y RP I+ G L G+RHPC+E QD V FI ND +
Sbjct: 590 GVLAHLDVIVSLSHAAVHAPDAYVRPKIHTRGEGQTKLLGARHPCMELQDDVQFITNDVE 649
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L R +S F IITGPNMGGKST+IRQ GV LMAQVGSFVPC A +++ D I ARVGA D
Sbjct: 650 LTRDQSSFIIITGPNMGGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASD 709
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 710 SQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGC 769
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS------RKLTMLYKVEP 824
+FATHFHELTALA Q V N HV+AHI T+ R++T+LYKVEP
Sbjct: 770 FAMFATHFHELTALA---------DQYPQVKNMHVTAHISGTNGDVNAKREVTLLYKVEP 820
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
G CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 821 GICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 856
>gi|46123905|ref|XP_386506.1| MSH2_NEUCR DNA mismatch repair protein MSH2 [Gibberella zeae PH-1]
Length = 930
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/927 (41%), Positives = 553/927 (59%), Gaps = 72/927 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELKLD + GF+ F+K+LP+ + +R FDR D+YT+HG++A +IAKT Y TT+ +RQ
Sbjct: 5 PELKLDDEG--GFIRFFKSLPDVNQDTIRIFDRGDWYTSHGQDANYIAKTVYKTTSVVRQ 62
Query: 68 LGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG L SV+++ +F R+ LL + +E+++ S NW+ +K +PGNL
Sbjct: 63 LGRNDHTGLPSVTMTMTVFRQFLREALL-KLGKRIEIWQSSSGRMNWKCIKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L +++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDDL--GGQIESAPMILAVKISAKASEARNVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLLPT-------EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
L+ LG +ECL+ E K E ++ + CGV + ER +F RD+ QDL
Sbjct: 180 LLIQLGVRECLIQVDKGDKKDENEKDPELAKIKKIIDNCGVAIAERPAGDFGIRDIEQDL 239
Query: 237 DRLVR----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
RL++ S+ P DL ++A G+ +L+ Y +L D SN+G Y + ++ L +M+
Sbjct: 240 ARLLKDERSASLLPQTDL----KLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAHFMK 295
Query: 293 LDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
LD+AA++ALN++ D +K S+FG++N C +G RLL WLKQPL+ NEI R
Sbjct: 296 LDAAALKALNLMPGPRDGSKTMSIFGVLNH-CKTPVGSRLLAQWLKQPLMSKNEIEKRQQ 354
Query: 353 IVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AF DT LRQ L++ HL+ I D+ RL ++ +A L+ +V+ YQ IRLP
Sbjct: 355 LVEAFYVDTELRQTLQEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLP------ 408
Query: 412 QQYEGQFSSLIKERYLDPLE-----SLTD-DDHLNKFIALVETSVDLDQLENGEYMISSS 465
+ G F ++ E Y DPL+ L D D L K +VE +VDLD L+ EY+I +
Sbjct: 409 -GFIGTFEGVMDENYKDPLDEAYTTKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKAD 467
Query: 466 YDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPK 524
+D L ++ + + L++ I + +A DL DK + L+ + G R+T++E
Sbjct: 468 FDKSLRIIRKKLDQLDKDIRAEFTASAKDLGQEADKKIFLETSHKVHGVCMRLTRQEAGC 527
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
IR +++ T+K+GV FT KL+ +Y ++ + Y Q LV+ V+Q A ++
Sbjct: 528 IRN--NSKYQECSTQKNGVYFTTKKLQAYRREYDQLSQNYNRTQSSLVHEVVQVASSYCP 585
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF 644
+ + LA +L+ LDV++S A + P Y RP I+ G IL +RHPC+E QD V F
Sbjct: 586 VLERLAGILAHLDVIVSLAHASVHAPESYVRPKIHARGEGQTILREARHPCMELQDDVQF 645
Query: 645 IPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFA 704
I ND +L R KS F IITGPNMGGKST+IRQ GV LMAQVG FVPC A +++ D I A
Sbjct: 646 ITNDVELTRDKSSFLIITGPNMGGKSTYIRQTGVIALMAQVGCFVPCAEAELTIYDSILA 705
Query: 705 RVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL 764
RVGA D QL+GVSTFM EMLETA+ILK AT SLI+IDELGRGTSTYDGFGLAWAI EH+
Sbjct: 706 RVGASDSQLKGVSTFMAEMLETANILKSATSESLIVIDELGRGTSTYDGFGLAWAISEHI 765
Query: 765 VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST---------SRK 815
V+EI +FATHFHELTALA Q V N HV+AHI T R+
Sbjct: 766 VKEIGCSAMFATHFHELTALA---------DQYPQVQNLHVTAHIGGTDAAASEADAKRE 816
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
+T+LYKV PG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT +D ++
Sbjct: 817 VTLLYKVAPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTTK---HEDLGLQYSK 873
Query: 876 KRKRISDPNDMSRGAARAHQFLKEFSD 902
+ DM G+A + L E+ D
Sbjct: 874 Q--------DMEDGSAMLKRVLVEWKD 892
>gi|449543819|gb|EMD34794.1| hypothetical protein CERSUDRAFT_125339 [Ceriporiopsis subvermispora
B]
Length = 971
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/890 (42%), Positives = 545/890 (61%), Gaps = 58/890 (6%)
Query: 13 LDAKQARGFLSFYKTLPNDTR---AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
+D GF SF+ LP + +R F R +YY+AHG +A ++A + T T ++ LG
Sbjct: 16 IDNASHPGFCSFFAKLPKKSPEDGTLRLFYRNEYYSAHGPDALYVATHVFRTNTVIKYLG 75
Query: 70 TGSDA-LSSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNWRLVKSGTPGNL 122
G A L SV + + R+ L R +E++ G G + +RL K +PGNL
Sbjct: 76 PGGRAGLPSVILGEAKAVEFLREALTSR-QLKVEIWVPEAGQGKKATKFRLDKEASPGNL 134
Query: 123 GSYEDVLFANNEMQDTPVIVAL--------FPNFRENGCTIGLGYVDLTKRVLGLAEFLD 174
+ ED+LF N+++ P+++A+ + + ++G+ + D T R +G+A+F+D
Sbjct: 135 QAVEDLLFGNSDIMAAPIVMAVKVTSSISAGESVKAKTKSVGVAFADATVREIGVADFVD 194
Query: 175 DSHFTNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFKT 229
+ F+N+E+ ++ L KE L+PT + E K L+D L RCGV++TERK +EF T
Sbjct: 195 NDVFSNLETLVIQLSVKEALIPTGTASGTTERDLELKKLKDVLDRCGVVITERKPSEFTT 254
Query: 230 RDLVQDLDRLVRGSVEPVRDLVSG--------FEIAPGALGALLSYAELLSDESNYGNYY 281
+++ DL RL+ S P V +AP AL AL+SY L+SD +N+G Y
Sbjct: 255 KNVQDDLMRLLNPSSIPSSSSVDASLTIPQLSLPVAPSALSALISYLSLMSDPTNHGAYT 314
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTD--ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQ 339
IR + L +M+LD++A+RALN+ E+ + +NKN +LFGL+N+ C G RLL WLKQ
Sbjct: 315 IRTHDLSQFMKLDASALRALNLTEAPGNIGSNKNTTLFGLLNK-CKTAQGSRLLAAWLKQ 373
Query: 340 PLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLY 398
PL++++EI R ++V+ FV D+ R+ L+ L+ + D+ R+ +K A L+ +V++Y
Sbjct: 374 PLVNLHEIRKRQNLVELFVTDSNARRTLQDDFLRMMPDMHRICKRFQKSAASLEDVVRVY 433
Query: 399 QSSIRLPYIRSALQQYE----GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ 454
Q+ ++L + S+L E +LI E YL L + L+K+ +VE ++DLD+
Sbjct: 434 QAVLKLEGLISSLDGLETTDQDHLKALIDEMYLTKLREY--ETSLSKYAEMVEQTLDLDE 491
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
LEN ++I +D L L + + + S H+ A+DLDL +DK L L+ G+
Sbjct: 492 LENHNFVIKPDFDERLQKLAEKLREIRDGLDSQHRAVANDLDLELDKKLHLENSPVHGYC 551
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
FR+TK + I K ++ L T K GV FT T L++L +QYQ+ + Y Q LV
Sbjct: 552 FRVTKNDARVITGK--KKYPELGTLKSGVFFTTTPLRELANQYQETTDAYSRTQSGLVKE 609
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
V+ A T++ + ++ +++ LDV++S A +A + P Y +P + G +IL+ +RHP
Sbjct: 610 VVNIASTYTPVLEAWNGVIAHLDVIISLAHVAVNAPEAYVKPTLLEKGSGSLILKEARHP 669
Query: 635 CVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
C+E QD ++FIPND ++I+ +S FQIITGPNMGGKST+IRQVGV LMAQ GSFVPC A
Sbjct: 670 CLEVQDDLSFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIALMAQAGSFVPCSEA 729
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+ V D I RVGAGD QL+G+STFM EMLETA+IL+ A+ SLIIIDELGRGTSTYDGF
Sbjct: 730 RVPVFDSILCRVGAGDSQLKGISTFMAEMLETATILRSASKDSLIIIDELGRGTSTYDGF 789
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST-- 812
GLAWAI EH+ +I A LFATHFHELTAL E + V N HV AH+ ++
Sbjct: 790 GLAWAISEHIASQIHAFCLFATHFHELTALDQEVPH---------VKNLHVVAHVSNSDE 840
Query: 813 ---SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
R++T+LYKVEPG CDQSFGIHVAE ANFPE+VV LA+ KA ELEDF
Sbjct: 841 AARDREITLLYKVEPGICDQSFGIHVAELANFPENVVKLAKRKADELEDF 890
>gi|402890841|ref|XP_003908682.1| PREDICTED: DNA mismatch repair protein Msh2 [Papio anubis]
Length = 851
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/857 (43%), Positives = 535/857 (62%), Gaps = 44/857 (5%)
Query: 85 FETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGNLGSYEDVLFANNEMQD 137
FE+ +DLLL R + +E+Y+ N W L +PGNL +ED+LF NN+M
Sbjct: 3 FESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGNLSQFEDILFGNNDMSA 61
Query: 138 TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT 197
+ +V + + + +G+GYVD +R LGL EF D+ F+N+E+ L+ +G KEC+LP
Sbjct: 62 SIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPG 121
Query: 198 EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG--------SVEPVRD 249
+ + LR + R G+++TERKK +F T+D+ QDL+RL++G +V P +
Sbjct: 122 -GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEME 180
Query: 250 LVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE-SKT 308
++A +L A++ + ELLSD+SN+G + + + YM+LD AA+RALN+ + S
Sbjct: 181 ----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVE 236
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+AFV+D LRQ L+
Sbjct: 237 DTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQ 295
Query: 369 QHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
+ L +R D+ RL +++ A LQ +LYQ +LP + AL+++EG+ L+ ++
Sbjct: 296 EDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFV 355
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+ LE+++ S
Sbjct: 356 TPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQST 413
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
A DL L K +KLD TQFG+ FR+T KEE +R F ++ +K+GVKFTN
Sbjct: 414 LISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRN--NKNFSTVDIQKNGVKFTN 471
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+KL L ++Y K EY+ Q +V ++ + + E ++L +L++LD ++SFA +++
Sbjct: 472 SKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSN 531
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMG 667
P PY RP I G IIL+ SRH CVE QD + FIPND + K F IITGPNMG
Sbjct: 532 GAPVPYVRPAILEKGQGRIILKASRHACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMG 591
Query: 668 GKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
GKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETA
Sbjct: 592 GKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETA 651
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHE 787
SIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATHFHELTALA+
Sbjct: 652 SILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN- 710
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHVAE ANFP+ V+
Sbjct: 711 --------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIE 760
Query: 848 LAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLET 907
A++KA ELE+F S +E +K+ + + +G +FL + MP
Sbjct: 761 CAKQKALELEEFQYIGE-SQGYDMEPAAKKCYL----EREQGEKIIQEFLSKVKQMPFTE 815
Query: 908 MDLKEALERVKRMKDDL 924
M + ++K++K ++
Sbjct: 816 MSEENITIKLKQLKAEV 832
>gi|350423484|ref|XP_003493495.1| PREDICTED: DNA mismatch repair protein Msh2-like [Bombus impatiens]
Length = 921
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/875 (41%), Positives = 529/875 (60%), Gaps = 38/875 (4%)
Query: 10 ELKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+ +D + F+ F+K LP +RFF+R DYYT HG +A F A+ + TT+ + +
Sbjct: 8 QFNMDPPSQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGNDALFAAQEVFKTTSVCKMI 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGS 124
G V ++KN FE+ RDLLL + + +E+Y GS NW L G+PGNL
Sbjct: 68 GADPYKTEGVILNKNHFESFIRDLLLVK-QYRVEVYVNQGSAKNQNWVLEYKGSPGNLTQ 126
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+ED LF NN++ + ++A+ +GL VD T + EF D+ F+N+ES
Sbjct: 127 FEDTLFGNNDVAVSVHVIAVKLGMEAKSRIVGLSCVDTTATSFSVCEFQDNESFSNLESM 186
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--- 241
+V L KECLL + S E +TL+ + R VM+T RK++EF + ++QDL+ L++
Sbjct: 187 VVTLAPKECLL-IQGEGSYEFQTLKQVMERNNVMVTTRKRSEFSSESVIQDLNTLIKFKK 245
Query: 242 GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
G + V+ L A A AL+ Y +L SDE N + I + Y++LDSAA++A
Sbjct: 246 GQQQNVQSLPEINLSFAMSATSALIKYLDLTSDEGNLNQFAIDQIKESRYLKLDSAAIKA 305
Query: 301 LNVLESKTD------ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
LN+ ES+ D N S+ G++++ C G RLL W++QPL D+ I R DIV
Sbjct: 306 LNI-ESRVDTSSILNGNAPTSILGILDK-CRTSQGHRLLAQWIRQPLKDLCLIKERHDIV 363
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+ V+D LR +L + HL+RI D++ L L ++++ LQ + K+Y LP + L+Q
Sbjct: 364 ETLVNDNELRTNLSEDHLRRIPDLQVLAKKLARKKSTLQDLYKIYMCISHLPRL---LEQ 420
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+K + DPL L D ++KF +VE ++DLD E G++++ + +D L L
Sbjct: 421 LSNINVIALKTMFSDPLSELITD--MDKFQQMVEQTIDLDSAEKGDFLVRAEFDDELKEL 478
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
KN + +E ++ S + A+DL + K LKL+ Q G+ FR+T KEE +R K Q+
Sbjct: 479 KNTMDEVEAKLQSQLGKVANDLSIEAGKTLKLESNQQLGYYFRVTLKEEKVLRNK--KQY 536
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
I+L++ K GV+F + KL L D+Y ++Y QK++V +I+ A +S K++ +L
Sbjct: 537 IILDSNKSGVRFRSNKLNDLNDEYIVARDKYTVEQKKVVTEIIEIAAGYSSTIKAIGNVL 596
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
+ LDVL +FA +A S PY RP++ P + G+ L RHPC+E Q+ V+FI ND R
Sbjct: 597 ASLDVLTAFASVAVSANKPYVRPEMLPTEAGEFNLTQVRHPCLEIQEGVDFIANDISFKR 656
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
G+ F+IITGPNMGGKST+IR GV+ LMA +GSFVPCD+A IS+ DCI ARVGA D QL
Sbjct: 657 GECHFRIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDSQL 716
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EM+ETA+ILK AT SL++IDELGRGTSTY+G G+AW+I E+L +EI+ L
Sbjct: 717 KGLSTFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCL 776
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHE+T L E + V N HV+A +D KLT+LYKV+PG CDQSFGI
Sbjct: 777 FATHFHEITKLEEE---------VSAVKNQHVTALVDDN--KLTLLYKVKPGICDQSFGI 825
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDD 868
HVA+ ANFP+ V+ A+ K AELED+ S D
Sbjct: 826 HVAKMANFPQDVIEFAKRKQAELEDYQDSVFEGSD 860
>gi|408399575|gb|EKJ78674.1| hypothetical protein FPSE_01162 [Fusarium pseudograminearum CS3096]
Length = 930
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/927 (41%), Positives = 552/927 (59%), Gaps = 72/927 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELKLD + GF+ F+K+LP+ + +R FDR D+YT+HG++A +IAKT Y TT+ +RQ
Sbjct: 5 PELKLDDEG--GFIRFFKSLPDVNQDTIRIFDRGDWYTSHGQDANYIAKTVYKTTSVVRQ 62
Query: 68 LGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG L SV+++ +F R+ LL + +E+++ S NW+ +K +PGNL
Sbjct: 63 LGRNDHTGLPSVTMTMTVFRQFLREALL-KLGKRIEIWQSSSGRMNWKCIKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L +++ P+I+A+ + + + +G+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDDL--GGQIESAPMILAVKISAKASEARNVGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLLPTEAVKSS-------ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
L+ LG +ECL+ + E ++ + CGV + ER +F RD+ QDL
Sbjct: 180 LLIQLGVRECLIQVDKGDKKDEKEKDPELAKIKKIIDNCGVAIAERPAGDFGIRDIEQDL 239
Query: 237 DRLVR----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
RL++ S+ P DL ++A G+ +L+ Y +L D SN+G Y + ++ L +M+
Sbjct: 240 ARLLKDERSASLLPQTDL----KLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAHFMK 295
Query: 293 LDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
LD+AA++ALN++ D +K S+FG++N C +G RLL WLKQPL+ NEI R
Sbjct: 296 LDAAALKALNLMPGPRDGSKTMSIFGVLNH-CKTPVGSRLLAQWLKQPLMSKNEIEKRQQ 354
Query: 353 IVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AF DT LRQ L++ HL+ I D+ RL ++ +A L+ +V+ YQ IRLP
Sbjct: 355 LVEAFYVDTELRQTLQEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLP------ 408
Query: 412 QQYEGQFSSLIKERYLDPLE-----SLTD-DDHLNKFIALVETSVDLDQLENGEYMISSS 465
+ G F ++ E Y DPL+ L D D L K +VE +VDLD L+ EY+I +
Sbjct: 409 -GFIGTFEGIMDENYKDPLDEAYTTKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKAD 467
Query: 466 YDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPK 524
+D L ++ + + L++ I + +A DL DK + L+ + G R+T++E
Sbjct: 468 FDKSLRIIRKKLDQLDKDIRAEFTASAKDLGQEADKKIFLETSHKVHGVCMRLTRQEAGC 527
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
IR +++ T+K+GV FT KL+ +Y ++ + Y Q LV+ V+Q A ++
Sbjct: 528 IRN--NSKYQECSTQKNGVYFTTKKLQAYRREYDQLSQNYNRTQSSLVHEVVQVASSYCP 585
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF 644
+ + LA +L+ LDV++S A + P Y RP I+ G IL +RHPC+E QD V F
Sbjct: 586 VLERLAGILAHLDVIVSLAHASVHAPESYVRPKIHARGEGQTILREARHPCMELQDDVQF 645
Query: 645 IPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFA 704
I ND +L R KS F IITGPNMGGKST+IRQ GV LMAQVG FVPC A +++ D I A
Sbjct: 646 ITNDVELTRDKSSFLIITGPNMGGKSTYIRQTGVIALMAQVGCFVPCAEAELTIYDSILA 705
Query: 705 RVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL 764
RVGA D QL+GVSTFM EMLETA+ILK AT SLI+IDELGRGTSTYDGFGLAWAI EH+
Sbjct: 706 RVGASDSQLKGVSTFMAEMLETANILKSATSESLIVIDELGRGTSTYDGFGLAWAISEHI 765
Query: 765 VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST---------SRK 815
V+EI +FATHFHELTALA Q V N HV+AHI T R+
Sbjct: 766 VKEIGCSAMFATHFHELTALA---------DQYPQVQNLHVTAHIGGTDAAASEADAKRE 816
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
+T+LYKV PG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT +D ++
Sbjct: 817 VTLLYKVAPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTTK---HEDLGLQYSK 873
Query: 876 KRKRISDPNDMSRGAARAHQFLKEFSD 902
+ DM G+A + L E+ D
Sbjct: 874 Q--------DMEDGSAMLKRVLVEWKD 892
>gi|389740898|gb|EIM82088.1| DNA mismatch repair protein [Stereum hirsutum FP-91666 SS1]
Length = 973
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/906 (43%), Positives = 554/906 (61%), Gaps = 74/906 (8%)
Query: 13 LDAKQARGFLSFYKTLPNDTR----AVRFFDRR--DYYTAHGENATFIAKTYYHTTTALR 66
LD GF ++ TLP + VR F R ++YTAHG +A +IA+ +HT + L+
Sbjct: 11 LDTNVDPGFCKWFSTLPPKSPETDGTVRLFARNNGEFYTAHGADALYIAQHVFHTNSVLK 70
Query: 67 QLGTG--SDALSSVSVSKNMFETIARD-LLLERTDHTLELYEGSG---SNWRLVKSGTPG 120
LG G + L SV++ ++ +T RD L +++ + + EG+G S +RL K +PG
Sbjct: 71 YLGAGGRTGGLPSVNLRDSVAKTFLRDALTIKQLKVEIWMPEGTGKKVSKFRLDKEASPG 130
Query: 121 NLGSYEDVLFANNEMQDTPVIVAL-------FPNF-RENGCTIGLGYVDLTKRVLGLAEF 172
NL + ED+LF + ++ P+++A+ P + T+G+ + D + R LG+++F
Sbjct: 131 NLQAVEDLLFVDTDVMSAPMVMAIKLASTPAVPGAPKSKSKTVGIAFADSSVRQLGVSDF 190
Query: 173 LDDSHFTNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEF 227
+D+ F+N E+ +V LG KE L+ T + + + L++ L RCGV++TERK +EF
Sbjct: 191 VDNDLFSNTETLVVQLGVKEALVTTGTASGTTDRDFDLRKLKEVLDRCGVVITERKPSEF 250
Query: 228 KTRDLVQDLDRLV-RGSVEP--VRDLVSG-----FEIAPGALGALLSYAELLSDESNYGN 279
+++ +DL RL+ + P D S AP AL ALL+Y LL+D SN+G
Sbjct: 251 TAKNIQEDLTRLLTKPDAVPSATGDASSSIPQLSLPTAPAALTALLTYLNLLADTSNHGA 310
Query: 280 YYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQ 339
+ I + L YMRLD++A+RALN++E A +N +L GL+N+ C G R+L WLKQ
Sbjct: 311 WTIYTHDLGQYMRLDASALRALNLVEGT--ATRNTTLLGLLNK-CKTAQGTRMLGSWLKQ 367
Query: 340 PLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLY 398
PL++ +EI R D+V+ FVDD R+ L+ +K + D+ R+ +K A L+ +V++Y
Sbjct: 368 PLVNRHEILKRQDLVETFVDDLNARRTLQDDFMKLMPDMHRICKRFQKSVASLEDVVRVY 427
Query: 399 QSSIRLPYIRSALQ--QYEGQFS-SLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQL 455
Q+ ++L + L+ Y+ S LI+E YL+ E L+ + +VE ++DL QL
Sbjct: 428 QAVLKLSGLIENLKAVDYKSDRSRDLIQETYLEHFEKHATS--LSNYADMVEQTLDLSQL 485
Query: 456 ENGEYMISSSYDTGL----SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF 511
E +Y+I YD L SALK E L+R+ HK+ DL L +DK L+L+ +
Sbjct: 486 EQHKYVIKPDYDQKLMNIASALKEALEGLDRE----HKEVGRDLGLELDKKLRLENTQTY 541
Query: 512 GHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKEL 571
G+ FR+TK + I K ++I L T K GV FT LK+ YQ+ E Y Q L
Sbjct: 542 GYCFRLTKNDARAINGK--RKYIELGTVKAGVHFTTATLKEHATDYQESTERYSRTQSSL 599
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGS 631
V V+ A T++ + ++L +L+ LDV+LSFA +A++ P Y +P I GD+IL+ +
Sbjct: 600 VKEVVSIAATYAPVLEALNGVLAHLDVILSFAQVAANAPEAYVKPTIVDMGTGDLILKEA 659
Query: 632 RHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV-GVNILMAQVGSFVP 690
RHPC+E QD ++FIPND ++I+ +S FQIITGPNMGGKST+IRQV GV LMAQ GSFVP
Sbjct: 660 RHPCLEVQDDMSFIPNDVEMIKNESEFQIITGPNMGGKSTYIRQVIGVIALMAQTGSFVP 719
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
C A I + D I RVGAGD QL+G+STFM EMLETA+ILK A+ SLIIIDELGRGTST
Sbjct: 720 CSEAQIPIFDSILCRVGAGDSQLKGISTFMAEMLETATILKSASKDSLIIIDELGRGTST 779
Query: 751 YDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI- 809
YDGFGLAWAI EH+ +I A LFATHFHELTAL E + V N HV AH+
Sbjct: 780 YDGFGLAWAISEHIASQIHAFCLFATHFHELTALDQE---------LSHVKNLHVVAHVS 830
Query: 810 --DSTS----RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
D TS R +T+LYKVEPG CDQSFGIHVAE ANFPESVV LA+ KA ELEDF
Sbjct: 831 KADETSKSKERDITLLYKVEPGVCDQSFGIHVAELANFPESVVRLAKRKADELEDFN--- 887
Query: 864 VISDDA 869
+DDA
Sbjct: 888 --TDDA 891
>gi|344291835|ref|XP_003417635.1| PREDICTED: DNA mismatch repair protein Msh2-like [Loxodonta
africana]
Length = 916
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/870 (42%), Positives = 538/870 (61%), Gaps = 43/870 (4%)
Query: 72 SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGNLGS 124
+ L SV +SK FE+ + LLL R + +E+Y+ N W L +PGNL
Sbjct: 54 AKTLESVVLSKMNFESFVKGLLLVR-QYRVEVYKNKAGNKASKENDWYLAFKASPGNLSQ 112
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+E+
Sbjct: 113 FEDILFGNNDMSSSIGVVGIKISVVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEAL 172
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG-- 242
LV +G KEC+LP + + LR + R G+++T+RK+ EF +D+ QDL+RL++
Sbjct: 173 LVQIGPKECVLPG-GETTGDMGKLRQIILRGGILITDRKRAEFSAKDIYQDLNRLLKAKK 231
Query: 243 ------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+V P + ++A +L A++ + ELLSD+SN+G + + + + YM+LD A
Sbjct: 232 GEQMNSAVLPEME----NQVAVASLSAVIKFLELLSDDSNFGQFELTTFDFNQYMKLDIA 287
Query: 297 AMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQ 355
A+RALN+ + S D + SL GL+N+ C G+RL++ W+KQPL+D N I RL++V+
Sbjct: 288 AVRALNLFQGSLEDTTGSQSLAGLLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVE 346
Query: 356 AFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
AFV+D LRQ L++ L +R D+ RL +++ A LQ ++YQ +LP + AL++Y
Sbjct: 347 AFVEDAELRQILQEDLLRRFPDLNRLAKKFQRQAANLQNCYQVYQGVNQLPNVIQALEKY 406
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
EG+ SL+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D L+ L+
Sbjct: 407 EGKHQSLLLAIFVTPLVDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLTELR 464
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R F
Sbjct: 465 EVMDDLEKKMQSTLTGAARDLGLEPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFT 522
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
+++ +K+GVKF N+KL L ++Y K EY+ Q +V +I + + E ++L +L+
Sbjct: 523 IVDIQKNGVKFANSKLTSLNEEYTKNKTEYEEAQNAIVKEIINISSGYVEPMQTLNDVLA 582
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
+LD ++SFA +++ P Y RP I G I+L SRH CVE QD V FIPND +
Sbjct: 583 QLDAVVSFAHVSNGAPVAYVRPVILEKGRGRILLTASRHACVEVQDEVAFIPNDVHFEKD 642
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+
Sbjct: 643 KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK 702
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ I A +F
Sbjct: 703 GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATRIGAFCMF 762
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATHFHELTALA Q+ V N HV+A +T LTMLY+V+ G CDQSFGIH
Sbjct: 763 ATHFHELTALAD---------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIH 811
Query: 835 VAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAH 894
VAE A+FP V+ A++KA ELE+F D + E +KR + + +G
Sbjct: 812 VAELASFPRHVIECAKQKALELEEFQNIGKSQDYGETEPAAKRCYL----EREQGEKIIQ 867
Query: 895 QFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+FL + +P TM + ++K++K ++
Sbjct: 868 EFLSKVKQVPFTTMSEGDITMKLKQLKAEV 897
>gi|302681541|ref|XP_003030452.1| hypothetical protein SCHCODRAFT_257642 [Schizophyllum commune H4-8]
gi|300104143|gb|EFI95549.1| hypothetical protein SCHCODRAFT_257642 [Schizophyllum commune H4-8]
Length = 965
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/978 (39%), Positives = 576/978 (58%), Gaps = 81/978 (8%)
Query: 14 DAKQARGFLSFYKTLPN---DTRAVRFFDRR---DYYTAHGENATFIAKTYYHTTTALRQ 67
D+ GF+SF+ LP +T +R F R+ ++Y+ +G +A F+A +HT + ++
Sbjct: 13 DSTTDPGFVSFFSHLPKKSPETGTLRLFHRQGPDEFYSCYGPDALFVANYVFHTNSVIKY 72
Query: 68 LGTGSDA--LSSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNWRLVKSGTP 119
LG G A L +V + + +++ RD L + +E+Y G G + + L K +P
Sbjct: 73 LGHGGRATGLPTVHLKTTVAQSLLRDALTVK-QLKVEIYVPESGQGKRATKFHLDKEASP 131
Query: 120 GNLGSYEDVLFANNEMQDTPVIVAL------FPNFRENGCTIGLGYVDLTKRVLGLAEFL 173
GNL ED+LF N++M P+++A+ + T+G+ Y D + R LG+A+F+
Sbjct: 132 GNLQQVEDILFTNSDMTTAPIVMAITLASTPAAGGKTKLKTVGVAYADTSLRELGVADFV 191
Query: 174 DDSHFTNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFK 228
D+ ++N ES ++ LG KE ++P + + LR L RCGV++TERK +EF+
Sbjct: 192 DNELYSNTESLIIQLGVKEAVIPMGTSSGTSERDLDLNKLRSVLDRCGVVITERKPSEFR 251
Query: 229 TRDLVQDLDRLV-----RGSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYI 282
+++ D+ RL+ + +P + A GAL ALL Y LL+D +N+ + I
Sbjct: 252 DKNVADDVPRLLVATPGTSTADPTATIPELSLPNAKGALNALLGYLSLLADPANHNAWTI 311
Query: 283 RKYSLDSYMRLDSAAMRALNVLE---SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQ 339
R + L+ YM+LD++A+RALN+++ +NKN +L GL+N+ C G R+L WLKQ
Sbjct: 312 RTHDLEQYMKLDASALRALNLVDMTGQSGQSNKNTTLLGLLNK-CKTAQGTRMLGTWLKQ 370
Query: 340 PLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLY 398
PL++++EI R ++VQ F DD RQ L+ ++LK + D+ RL +K A L+ +V++Y
Sbjct: 371 PLVNLHEIQKRQELVQIFFDDANARQTLQDEYLKMMPDMHRLGRRFQKGLATLENVVRVY 430
Query: 399 QSSIRLPYIRSALQQYEGQ---FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQL 455
Q ++LP + AL+ + +LI+E YL L + L+K+ +VE ++DLDQL
Sbjct: 431 QVILKLPGMIEALEAVRTETPEHQALIEETYLRELRD--KEASLSKYSQMVEQTLDLDQL 488
Query: 456 ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
+N Y++ YD L L N+ + ++ H++ DL++ +DK L L+ +G+ F
Sbjct: 489 DNHNYVVKPDYDEQLQELHNKLQEATEKLDQEHRRVGEDLNIELDKKLHLENNPTYGYCF 548
Query: 516 RITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
R+TK + I K ++I L T K GV F KLK ++++ + Y Q LV +
Sbjct: 549 RLTKNDAKGITNK-KDKYIELATNKSGVYFVTKKLKTAAADHKELTQAYSRKQSGLVKEI 607
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ A T++ + +SL ++++ LDV++SFA ++ + P Y +P + G +IL+ +RHPC
Sbjct: 608 VAIAATYTSVMESLDSVIAHLDVIISFAHVSVNAPVTYVKPKVVERGNGSLILKEARHPC 667
Query: 636 VEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
+E QD VNFIPND ++I+ KS FQIITGPNMGGKST+IRQVGV LMAQ G FVPCD+A+
Sbjct: 668 LEVQDEVNFIPNDVEMIKDKSEFQIITGPNMGGKSTYIRQVGVIALMAQTGCFVPCDKAT 727
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
+ + D + RVGAGD QL+GVSTFM EMLETA+IL+ AT SLIIIDELGRGTSTYDGFG
Sbjct: 728 LPIFDSVLCRVGAGDSQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFG 787
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS-- 813
LAWAI EH+ +I A LFATHFHELTAL +Q+ V N HV AH+ S
Sbjct: 788 LAWAISEHIASQIHAFCLFATHFHELTAL---------DQQLPHVTNLHVVAHVSGDSSG 838
Query: 814 --RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKI 871
+T+LYKVEPG DQSFGIHVA ANFPE+VV LA+ KA ELEDF
Sbjct: 839 DTSDITLLYKVEPGVSDQSFGIHVARLANFPENVVKLAKRKADELEDF------------ 886
Query: 872 EVGSKRKRI---SDPNDMSRGAARAHQFLKEFSDMP----LETMDLKEA----LERVKRM 920
GS+ KR + P G LK+++ P +E D+ ++ LE +K++
Sbjct: 887 --GSEDKRSAPEAPPEVTEEGLKIVEDLLKQWAGEPDGEDVEMADVDDSPEAQLEELKKI 944
Query: 921 KDDLEKDAGDCCWLQQFF 938
+ ++ WL++
Sbjct: 945 VNAHKEQIEGNEWLKKVI 962
>gi|340709839|ref|XP_003393508.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh2-like [Bombus terrestris]
Length = 921
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/875 (41%), Positives = 529/875 (60%), Gaps = 38/875 (4%)
Query: 10 ELKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+ +D + F+ F+K LP +RFF+R DYYT HG +A F A+ + TT+ + +
Sbjct: 8 QFNMDPPSQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGNDALFAAQEVFKTTSVCKMI 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGS 124
G V ++KN FE+ RDLLL + + +E+Y GS NW L G+PGNL
Sbjct: 68 GAEPYKTEGVILNKNHFESFIRDLLLVK-QYRVEVYVNQGSAKNQNWVLEYKGSPGNLTQ 126
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+ED LF NN++ + ++A+ +GL VD T + EF D+ F+N+ES
Sbjct: 127 FEDTLFGNNDVAVSVHVIAVKLGMEAKSRIVGLSCVDTTATSFSVCEFQDNESFSNLESL 186
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--- 241
+V L KECLL + S E +TL+ + R VM+T RK++EF + ++QDL+ L++
Sbjct: 187 VVTLAPKECLL-IQGEGSYEFQTLKQVMERNNVMVTTRKRSEFSSESVIQDLNTLIKFKK 245
Query: 242 GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
G + V+ L A A AL+ Y +L SDE N + I + Y++LDSAA++A
Sbjct: 246 GQQQNVQSLPEVNLSFAMSATSALIKYLDLTSDEGNLNQFAIDQIKESRYLKLDSAAIKA 305
Query: 301 LNVLESKTD------ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
LN+ ES+ D N S+ G++++ C G RLL W++QPL D+ I R DIV
Sbjct: 306 LNI-ESRVDTSSILNGNAPTSILGILDK-CRTSQGHRLLAQWIRQPLKDLCLIKERHDIV 363
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+ V+D LR +L + HL+RI D++ L L ++++ LQ + K+Y LP + L+Q
Sbjct: 364 ETLVNDNELRTNLSEDHLRRIPDLQVLAKKLARKKSTLQDLYKIYMCISHLPRL---LEQ 420
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+K + DPL L D ++KF +VE ++DLD E G++++ + +D L L
Sbjct: 421 LSNINVIALKTMFSDPLSELIKD--MDKFQQMVEQTIDLDSAEKGDFLVRAEFDDELKEL 478
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
KN + +E ++ S + A+DL + K LKL+ Q G+ FR+T KEE +R K Q+
Sbjct: 479 KNTMDEVEAKLQSQLGKVANDLSIEAGKTLKLESNQQLGYYFRVTLKEEKVLRNK--KQY 536
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
I+L++ K GV+F + KL L D+Y ++Y QK++V +I+ A +S K++ +L
Sbjct: 537 IILDSNKSGVRFRSNKLNDLNDEYIVARDKYTVEQKKVVTEIIEIAAGYSSTIKAIGNVL 596
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
+ LDVL +FA +A S PY RP++ P + G+ L RHPC+E Q+ V+FI ND R
Sbjct: 597 ASLDVLTAFASVAVSANKPYVRPEMLPTEAGEFNLIQVRHPCLEIQEGVDFIANDISFKR 656
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
G+ F+IITGPNMGGKST+IR GV+ LMA +GSFVPCD+A IS+ DCI ARVGA D QL
Sbjct: 657 GECHFRIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDSQL 716
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EM+ETA+ILK AT SL++IDELGRGTSTY+G G+AW+I E+L +EI+ L
Sbjct: 717 KGLSTFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCL 776
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHE+T L E + V N HV+A +D KLT+LYKV+PG CDQSFGI
Sbjct: 777 FATHFHEITKLEEE---------VSAVKNQHVTALVDDN--KLTLLYKVKPGICDQSFGI 825
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDD 868
HVA+ ANFP+ V+ A+ K AELED+ S D
Sbjct: 826 HVAKMANFPQDVIEFAKRKQAELEDYQDSVFEGSD 860
>gi|449299727|gb|EMC95740.1| hypothetical protein BAUCODRAFT_501656 [Baudoinia compniacensis
UAMH 10762]
Length = 931
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/886 (42%), Positives = 542/886 (61%), Gaps = 63/886 (7%)
Query: 9 PELKLDAKQARGFLSFYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELKLD + GF+ Y L + + VR FDR D+ +AHGE+A IA+ Y TT+ ++
Sbjct: 5 PELKLDDES--GFIKAYLQLESAKNVDTVRIFDRGDWLSAHGEDAMLIARVQYKTTSVIK 62
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-WRLVKSGTPGNLGSY 125
LG S L SV+++ +++ R+ + R +E+ + +G N W ++K +PGNL
Sbjct: 63 TLGR-SPGLPSVTMTWTAYKSFLREAIF-RLGKRVEVLQTTGRNQWNVIKQASPGNLQDI 120
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
E+ L + P+I+A+ + + +G+ + D + R LG++EF D+ ++N ES
Sbjct: 121 EEEL--GGHIDSAPIILAVRVSAKATEARQVGVCFADASVRELGVSEFADNDIYSNFESL 178
Query: 185 LVALGCKECLLPTEAVKS-SECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
L+ LG KECL+ ++ K +E + LR CG ++ER +++F RD+ QDL RL+R
Sbjct: 179 LIQLGVKECLIQSDGTKKDAELQKLRTIADNCGCAVSERPQSDFSNRDIEQDLTRLLRDE 238
Query: 242 --GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
P DL ++A + AL+ Y +L+D +N+G Y + ++ L YM+LDS+A++
Sbjct: 239 RSAGTLPQTDL----KLAMTSAAALIKYLGVLTDATNFGQYQLYQHDLSQYMKLDSSALK 294
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
ALN++ S D ++ +L+GL+N C +G RLL WLKQPL+ ++EI R +V+AFV
Sbjct: 295 ALNLMPSPKDGSRTMNLYGLLNH-CKTPVGSRLLAQWLKQPLMSLDEIERRQQLVEAFVS 353
Query: 360 DTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQF 418
DT LRQ L++ HL+ I D+ RL ++++A L+ +V+ YQ +IRLP + G F
Sbjct: 354 DTELRQTLQEEHLRSIPDLYRLAKKFQRKKANLEDVVRAYQVAIRLP-------GFIGTF 406
Query: 419 SSLIKERYLDPLESLTDD------DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
++ E Y D L+S + D K +VET+VDLD L+N E++I S +D GL
Sbjct: 407 EGVMDEAYKDALDSEYTNKLRSYTDSFGKLQEMVETTVDLDALDNHEFIIKSEFDDGLRI 466
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
++ + + L ++ H+ A DL+ +K L L+ G FR+T+ E IR K Q
Sbjct: 467 IRKKLDKLRYEMEKEHRSVADDLNQDPEKKLFLENHKVHGWCFRLTRTEAAAIRNK--KQ 524
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
+ T+K+GV FT TK+ + ++ E+Y Q LV V+ A ++ + + LA +
Sbjct: 525 YQECSTQKNGVFFTTTKMTGYRRDFDQLSEQYNRTQSGLVQEVVNVAASYCPVIEKLAGV 584
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
L+ LDV++SFA ++ PT Y RP I+P G IL+ +RHPC+E QD ++FI ND L+
Sbjct: 585 LAHLDVIVSFAHVSVHAPTAYVRPKIHPRGTGSTILKEARHPCMEMQDDISFITNDVSLV 644
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
RG S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D Q
Sbjct: 645 RGDSEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTLFDCILARVGASDSQ 704
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETA+ILK AT SL+IIDELGRGTSTYDGFGLAWAI EH+++EI A
Sbjct: 705 LKGVSTFMAEMLETANILKTATRESLVIIDELGRGTSTYDGFGLAWAISEHIIKEIGAFA 764
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-DSTS-----------------R 814
+FATHFHELTAL H+ ++ V N HV AHI D S +
Sbjct: 765 MFATHFHELTAL-HDTYSQ--------VQNLHVVAHIGDGGSGDAAMTGTTDAPAAPRRQ 815
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
++T+LYKV PG DQSFGIHVAE FP+ VV +A+ KA ELEDF+
Sbjct: 816 EVTLLYKVVPGISDQSFGIHVAELVRFPQKVVNMAKRKADELEDFS 861
>gi|344245098|gb|EGW01202.1| DNA mismatch repair protein Msh2 [Cricetulus griseus]
Length = 852
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/858 (42%), Positives = 534/858 (62%), Gaps = 44/858 (5%)
Query: 85 FETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGNLGSYEDVLFANNEMQD 137
FE+ +DLLL R + +E+Y+ N W L +PGNL +ED+LF +N+M
Sbjct: 3 FESFVKDLLLVR-QYRVEVYKNKAGNKASKENDWYLAYKASPGNLSQFEDILFGSNDMSA 61
Query: 138 TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT 197
+ V + + + +G+GYVD +R LGL EF D+ F+N+E+ L+ +G KEC+LP
Sbjct: 62 SIGTVGVKMSTVDGQRHVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPG 121
Query: 198 EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG--------SVEPVRD 249
+ + LR + R G+++TERK+ +F T+D+ QDL+RL++G +V P +
Sbjct: 122 -GETAGDMGKLRQVIQRGGILITERKRADFSTKDICQDLNRLLKGKKGEQMNSAVLPEME 180
Query: 250 LVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE-SKT 308
++A +L A++ + ELLSD+SN+G + + + YMRLD AA+RALN+ + S
Sbjct: 181 ----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFRQYMRLDMAAVRALNLFQGSVE 236
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+ FV+D+ LRQ L+
Sbjct: 237 DTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDKNRIEERLNLVETFVEDSELRQTLQ 295
Query: 369 QHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
+ L +R D+ RL +++ A LQ +LYQ +LP + AL++Y+G+ +L+ ++
Sbjct: 296 EDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPSVIQALKKYQGRHQALLMAVFV 355
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+ + LE+++ S
Sbjct: 356 TPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREVMDGLEKKMQST 413
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
A L L K +KLD QFG+ FR+T KEE +R F ++ +K+GVKFTN
Sbjct: 414 LISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFSTVDIQKNGVKFTN 471
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
++L L ++Y K EY+ Q +V ++ + + E ++L +L++LD ++SFA +++
Sbjct: 472 SELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSN 531
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMG 667
+ P PY RP I G I+L+ SRH CVE QD V FIPND + K F IITGPNMG
Sbjct: 532 AAPVPYVRPVILEKGKGRIVLKASRHACVEIQDEVAFIPNDVCFEKDKQMFHIITGPNMG 591
Query: 668 GKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
GKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETA
Sbjct: 592 GKSTYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDSQLKGVSTFMAEMLETA 651
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHE 787
+IL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATHFHELTALA
Sbjct: 652 AILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALA-- 709
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
Q+ V N HV+A ++ LTMLY+V+ G CDQSFGIHVAE ANFP VV
Sbjct: 710 -------SQIPTVNNLHVTAL--TSEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVVE 760
Query: 848 LAREKAAELEDFTPSAVISD-DAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLE 906
AR+KA ELE+F D ++E +K+ + + +G +FL + +P
Sbjct: 761 CARQKALELEEFQSIGTSQGRDGEMEPPAKKCYL----EREQGEKIIMEFLSKVKQVPFT 816
Query: 907 TMDLKEALERVKRMKDDL 924
M + ++K++K ++
Sbjct: 817 DMSEENITRKLKQLKAEV 834
>gi|326432823|gb|EGD78393.1| MSH2-Ex5 isoform [Salpingoeca sp. ATCC 50818]
Length = 904
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/880 (40%), Positives = 551/880 (62%), Gaps = 38/880 (4%)
Query: 17 QARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDAL 75
Q +GF F+++LP +RFFDR DYYT HG++A F+AKT + T ++ G L
Sbjct: 8 QKQGFCRFFQSLPEKPATTIRFFDRNDYYTLHGDDALFMAKTVFKTMGVVKHWG--PQKL 65
Query: 76 SSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN---WRLVKSGTPGNLGSYEDVLFAN 132
SV++S +FE +DLLL + ++ +++Y G+ W LVK +PGN +ED+L+A
Sbjct: 66 PSVNMSHMVFENTVKDLLLIK-NYRVQVYSTKGNKSGKWELVKKASPGNTQMFEDILYAG 124
Query: 133 NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE 192
+ + +++A+ +GL + D+T L + EF+D+ F+N+E+ +V +G +E
Sbjct: 125 G-VNSSSIVMAVKLATEGQERVVGLAFCDVTANELRVCEFVDNDQFSNLEALVVQVGARE 183
Query: 193 CLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS 252
CL+ ++ + K + + RC VM+T+RK++EF+ +D+ QDL RL++ +E + + +
Sbjct: 184 CLITSDKSNPALAKVAQ-VVERCNVMVTQRKRSEFQHKDIEQDLGRLLK--LEDDQTVST 240
Query: 253 GFEI----APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT 308
+I A + A++ Y ELLS++ N+ +++ +++ YMRLD+AA+RAL++ +
Sbjct: 241 LPQIDKKHAMDCVNAVIKYLELLSNDENFNRFFLLEFNFKQYMRLDAAAVRALSMFPTMG 300
Query: 309 DA-NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
D K+ SLFGL+NR C G+RLL WLKQPLLDV +I R ++V D +R L
Sbjct: 301 DGGQKSQSLFGLLNR-CKTAQGQRLLQQWLKQPLLDVAKIAERHNVVDILTHDDEMRTGL 359
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
L+R D+ RL +++A LQ V+ Y + +++P + + L +Y G+ + L+K +L
Sbjct: 360 IDVLRRFPDLNRLSKKFMRKKAQLQDCVQAYDAVLKIPKLTALLSEYHGEHAPLLKALFL 419
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
D L L D K+ L+E ++DL +++N +Y+I S++ + + ++ + L+ Q+ ++
Sbjct: 420 DDLADLAVD--FAKYKELIEKTIDLAEVDNHQYLIKPSFNEDMQSARDRMDELQGQLPAV 477
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHV-FRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
+ ++DL L K +KL++ ++ FR+++ E K+R + Q+ +LET K+GVKF
Sbjct: 478 LSKASADLGLDAQKTVKLERDSKTNQFHFRVSRTHEKKLRG--SRQYEILETLKNGVKFV 535
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
N +LK + ++Y E+Y Q+E+ +V++ A ++ L + + LDV +SFA
Sbjct: 536 NKRLKTINEEYVGCYEQYLRIQEEVARKVVEVASGYATPMDDLNCVSAHLDVYVSFAVAG 595
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNM 666
P PY +P + P GD++L G RHPCVE QD VNFI ND ++ R + QIITGPNM
Sbjct: 596 IEAPIPYVKPTMTPMGEGDLVLRGCRHPCVEVQDDVNFIANDVRMNRKTAELQIITGPNM 655
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GGKST+IRQ+G+ +L+AQ+G FVP ASI V D + ARVGAGD QL+G+STFM EMLET
Sbjct: 656 GGKSTYIRQIGIAVLLAQIGCFVPAQEASICVCDSVLARVGAGDSQLKGISTFMAEMLET 715
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
ASILK AT SL+IIDELGRGTSTYDGFGLAWAI EH+ + I LFATHFHELTA++
Sbjct: 716 ASILKSATANSLVIIDELGRGTSTYDGFGLAWAISEHVAKHIHCFCLFATHFHELTAMSS 775
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
E N V N HV A +++ LT+LYK++PG CD+SFGIHVAE A+FPE VV
Sbjct: 776 ELPN---------VTNLHVDAM--TSNGALTLLYKIKPGVCDRSFGIHVAELADFPEQVV 824
Query: 847 TLAREKAAELEDFTPSAVISDDAK-----IEVGSKRKRIS 881
+A++KAAELE+F ++A E +KR ++S
Sbjct: 825 QMAKDKAAELEEFAQDGNDDEEANDEGEGQETPTKRAKLS 864
>gi|395331444|gb|EJF63825.1| DNA mismatch repair protein [Dichomitus squalens LYAD-421 SS1]
Length = 964
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/915 (41%), Positives = 555/915 (60%), Gaps = 63/915 (6%)
Query: 5 QNKLPELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHT 61
+ K E ++D GF SF+ LP +T VR F R +YY+ HG +A ++A + T
Sbjct: 7 KEKDAEYEIDNSSHPGFCSFFAKLPPKSPETGTVRLFFRNEYYSVHGPDAHYVATHLFRT 66
Query: 62 TTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYE---GSG---SNWRLVK 115
+ ++ LG G L SV++S+++ ++ RD L + +E++ G G + + L K
Sbjct: 67 NSVIKYLG-GRAGLPSVTLSESLAKSFLRDALTSK-QLKVEIWAPEAGQGKKATKFVLDK 124
Query: 116 SGTPGNLGSYEDVLFANNEMQDTPVIVAL----FPNFRENGCT----IGLGYVDLTKRVL 167
+PGNL + ED+LF N ++ P+++A+ P + +G+ Y D + R L
Sbjct: 125 EASPGNLSAVEDLLFVNTDIVSAPIVMAIKIASTPAVPGSTAVKTKAVGVAYADSSTREL 184
Query: 168 GLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTER 222
G+A+F+D+ F+N E+ ++ L KE ++PT + + K L++ L RCGV++TER
Sbjct: 185 GVADFVDNDLFSNTETLIIQLSVKEAIIPTGTNSGTTERDFDLKKLKEVLDRCGVVITER 244
Query: 223 KKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI-------APGALGALLSYAELLSDES 275
K ++F +++ DL RL+ S P S I AP AL AL+SY LLSD S
Sbjct: 245 KPSDFTVKNINDDLVRLLNASAMPSSSTDSAATIPQLSLPTAPAALSALVSYLSLLSDPS 304
Query: 276 NYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD--ANKNFSLFGLMNRTCTAGMGKRLL 333
N+G + IR + L YMRLD++A+RALN+ E+ + +NKN +LFGL+N+ C G RLL
Sbjct: 305 NHGAWSIRTHDLSQYMRLDASALRALNLTEAPGNIGSNKNTTLFGLLNK-CKTAQGSRLL 363
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQ 392
WLKQPL++ ++I R +V+AF +D R+ L+ +LK + D+ R+ +K A L+
Sbjct: 364 GSWLKQPLVNRHDILRRQSLVEAFFEDANTRRILQDDYLKLMPDMHRICKRFQKSIASLE 423
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFS---SLIKERYLDPLESLTDDDHLNKFIALVETS 449
+V++YQ+ ++L S ++ E +L+KE YL L+ D L+K+ +V+ +
Sbjct: 424 DVVRVYQAVLKLEGFISTIESMETSSEDQKALLKEIYLTKLKEF--DGSLSKYSEMVQQT 481
Query: 450 VDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
+DLD+LEN ++I YD L +L ++ + + + H++ L L +DK L L+
Sbjct: 482 LDLDELENHNFVIKPDYDARLQSLADKLAEVRDGLDAEHRKVGKALGLELDKKLHLENSP 541
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
+G+ FRI+K + K+ ++I L K GV FT LK L ++ ++ E+Y Q
Sbjct: 542 TYGYCFRISKNDV-KLLHDDKKRYIELGALKSGVFFTTPTLKGLSTEHTEITEQYSRTQS 600
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
LV V+ A T++ + ++L +++ LDV +S A +A + P Y +P+I G ++L+
Sbjct: 601 GLVKEVVNIASTYTPVLEALNNVIAHLDVTVSLAHVAVNAPETYVKPEILARGSGSLVLK 660
Query: 630 GSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
+RHPC+E QD ++FIPND ++I+ +S FQIITGPNMGGKST+IRQVGV LMAQ GSFV
Sbjct: 661 EARHPCLEVQDDLSFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIALMAQTGSFV 720
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
PC A I + D I RVGAGD QL+G+STFM EMLETA+IL+ AT SLIIIDELGRGTS
Sbjct: 721 PCASARIPIFDSILCRVGAGDSQLKGISTFMAEMLETATILRSATKDSLIIIDELGRGTS 780
Query: 750 TYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI 809
TYDGFGLAWAI EH+ +I A +FATHFHELTAL E ++ V N HV AH+
Sbjct: 781 TYDGFGLAWAISEHIASQIHAFCMFATHFHELTALDQEISH---------VKNLHVVAHV 831
Query: 810 DSTS-----RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT---- 860
+ R +T+LYKVEPG CDQSFGIHVAE ANFPESVV LAR+KA ELEDF
Sbjct: 832 SDSEEGGGDRDITLLYKVEPGVCDQSFGIHVAELANFPESVVKLARKKAEELEDFNHEKA 891
Query: 861 ----PSAVISDDAKI 871
P+ V+ + KI
Sbjct: 892 EPELPADVVEEGTKI 906
>gi|302915423|ref|XP_003051522.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732461|gb|EEU45809.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 926
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/881 (43%), Positives = 538/881 (61%), Gaps = 57/881 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTR-AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELKLD + GF+ F+K+LP++ +R FDR D+YT+HGE+A FIAKT Y TT+ +RQ
Sbjct: 5 PELKLDDEG--GFIRFFKSLPSENDDTIRIFDRGDWYTSHGEDAMFIAKTVYKTTSVVRQ 62
Query: 68 LGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNLGS 124
LG L SV+++ +F R+ LL + +E+++ + NW+ VK +PGNL
Sbjct: 63 LGRNDHTGLPSVTMTMTVFRQFLREALL-KLGKRIEIWQSASGRMNWKCVKQASPGNLQD 121
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
ED L +++ P+I+A+ + + + IG+ + D + R LG++EFLD+ ++N E+
Sbjct: 122 VEDDL--GGQIESAPMILAVKISAKASEARNIGVCFADASVRELGVSEFLDNDLYSNFEA 179
Query: 184 ALVALGCKECLL---PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+ LG +ECL+ +E K E L+ + CGV + ER +F TRD+ QDL RL+
Sbjct: 180 LLIQLGVRECLVQIDKSEKEKDPELAKLKKIIDNCGVAIAERPSGDFGTRDIEQDLARLL 239
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
+ ++ P DL ++A G+ +L+ Y +L D SN+G Y + ++ L +M+LD+A
Sbjct: 240 KDERSATLLPQTDL----KLAMGSAASLIKYLGVLQDPSNFGQYQLYQHDLAQFMKLDAA 295
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A++ALN++ D +K S++G++N C +G RLL WLKQPL+ EI R +V+A
Sbjct: 296 ALKALNLMPGPRDGSKTMSVYGVLNH-CKTPVGSRLLAQWLKQPLMSKQEIEKRQQLVEA 354
Query: 357 FVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
F DT LRQ L++ HL+ I D+ RL ++ +A L+ +V+ YQ IRLP +
Sbjct: 355 FYVDTELRQTLQEEHLRSIPDLYRLSKRFQRGKANLEDVVRAYQVVIRLP-------GFI 407
Query: 416 GQFSSLIKERYLDPLE-----SLTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
G F ++ E Y DPL+ L D D L K +VE +VDLD L+ EY+I + +D G
Sbjct: 408 GTFEGVMDENYKDPLDEAYTTKLRDLSDSLGKLQDMVEQTVDLDALDRHEYIIKADFDKG 467
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF-GHVFRITKKEEPKIRKK 528
L ++ + + L+ I + +A DL DK + L+ + G R+T++E IR K
Sbjct: 468 LRIIRKKLDQLDSDIRAEFLTSARDLGQEPDKKIFLETNHKVHGVCMRLTRQEAGCIRNK 527
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+ + T+K+GV FT K++ ++ ++ + Y Q LV+ V+Q A ++ + +
Sbjct: 528 --SGYQECSTQKNGVYFTTKKMQAYRREHDQLSQNYNRTQSSLVHEVVQVASSYCPVLER 585
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPND 648
LA +L+ LDV++S A Y RP I+ G IL+ +RHPC+E QD V FI ND
Sbjct: 586 LAGVLAHLDVIVSLGHAAVHALESYVRPKIHARGEGQTILKEARHPCMELQDDVQFITND 645
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
+L R KS F IITGPNMGGKST+IRQ GV LMAQVG FVPC A +++ D I ARVGA
Sbjct: 646 IELTRDKSSFLIITGPNMGGKSTYIRQTGVIALMAQVGCFVPCSEAELTIYDSILARVGA 705
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 706 SDSQLKGVSTFMAEMLETANILKSATADSLIIIDELGRGTSTYDGFGLAWAISEHIVKEI 765
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS---------RKLTML 819
+FATHFHELTALA Q V N HV+AHI T R++T+L
Sbjct: 766 GCSAMFATHFHELTALA---------DQYPQVQNLHVTAHIGGTGGAVSEADAKREVTLL 816
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
YKV PG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 817 YKVAPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 857
>gi|302418756|ref|XP_003007209.1| DNA mismatch repair protein msh-2 [Verticillium albo-atrum
VaMs.102]
gi|261354811|gb|EEY17239.1| DNA mismatch repair protein msh-2 [Verticillium albo-atrum
VaMs.102]
Length = 922
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/875 (42%), Positives = 533/875 (60%), Gaps = 49/875 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK+D + GF+ ++K+LP DT +R FDR D+YTAHGE+A FIA+T Y TT+ +
Sbjct: 5 PELKVDDEH--GFIRYFKSLPEVHEDT--IRIFDRGDWYTAHGEDANFIARTVYKTTSVV 60
Query: 66 RQLGTGSD-ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNL 122
RQLG L SV+++ +F R+ L + +E+Y+ + NW++VK +PGNL
Sbjct: 61 RQLGRDDKTGLPSVTMTVTVFRQFLREALY-KLSKRVEIYQSTSGRMNWKVVKQASPGNL 119
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L + + P+I+A+ + + ++G+ + D + R LG++EFLD+ ++N
Sbjct: 120 QDVEEEL--GGQFEAAPMILAVKITAKASEARSVGVCFADASVRELGVSEFLDNDLYSNF 177
Query: 182 ESALVALGCKECLLPTEAV----KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLD 237
E+ L+ LG +ECL+ + + E LR + CGV ++ER EF T+D+ QDL
Sbjct: 178 EALLIQLGVRECLIQADKAEKDKRDPELTKLRQIIDNCGVAVSERSAVEFGTKDIEQDLA 237
Query: 238 RLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
RL++ + +++ G+ AL+ Y +L D SN+G Y + ++ L +M+LD+AA
Sbjct: 238 RLLKDERAVTLLPQTEMKLSMGSAAALIKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAAA 297
Query: 298 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
++ALN++ D K+ S++GL+N C G RLL WLKQPL+ +I R +V+AF
Sbjct: 298 LKALNLMPGPRDGAKSMSVYGLLNH-CKTPNGSRLLSQWLKQPLMSKQDIERRQQLVEAF 356
Query: 358 VDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
V DT LRQ +++ HL+ + D+ RL ++++A L+ +V+ YQ IRLP + G
Sbjct: 357 VSDTELRQTMQEEHLRSVPDLYRLAKRFQRKKANLEDVVRAYQVIIRLP-------GFLG 409
Query: 417 QFSSLIKERYLDPLESL------TDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
++ E Y DPL+ T D L K +VET+VDLD L+ EY+I +D L
Sbjct: 410 TLEGVMDEAYRDPLDEAYTSKLRTLSDSLVKLQEMVETTVDLDALDRHEYVIKPEFDDSL 469
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
++ + + +R I + A DL +K + L+ G+ R+T+ E IR K
Sbjct: 470 RIIRKKLDKAKRDIDQEFNKAAHDLGQEKEKKIFLENHKVHGYCMRLTRTEAGCIRNK-- 527
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+ + T+K+GV FT L+ L ++ + + Y Q LVN V+ A ++ + + LA
Sbjct: 528 SGYQECSTQKNGVYFTTRNLQNLRREFDQQSQNYNRTQASLVNEVVGVAASYCPVLEKLA 587
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L+ LDV++SFA + P Y RP ++ G +L+ +RHPC+E QD V FI ND +
Sbjct: 588 GVLAHLDVIISFAHCSVHAPIEYVRPKMHKRGEGQTVLKEARHPCLEMQDDVQFITNDVE 647
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L + KS F IITGPNMGGKST+IRQ+GV LMAQVG FVPC A +++ D I ARVGA D
Sbjct: 648 LTKDKSSFLIITGPNMGGKSTYIRQIGVIALMAQVGCFVPCAEAEMTIFDSILARVGASD 707
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 708 SQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGC 767
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST-----SRKLTMLYKVEPG 825
+FATHFHELTALA ++A V N HV+AHI + R++T+LYKVE G
Sbjct: 768 SAMFATHFHELTALADQHAQ---------VKNLHVTAHISGSEEGDAKREVTLLYKVEDG 818
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 819 ICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 853
>gi|346976785|gb|EGY20237.1| DNA mismatch repair protein msh-2 [Verticillium dahliae VdLs.17]
Length = 922
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/875 (42%), Positives = 532/875 (60%), Gaps = 49/875 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK+D + GF+ ++K+LP DT +R FDR D+YTAHGE+A FIA+T Y TT+ +
Sbjct: 5 PELKVDDEH--GFIRYFKSLPEVHEDT--IRIFDRGDWYTAHGEDANFIARTVYKTTSVV 60
Query: 66 RQLGTG-SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS--NWRLVKSGTPGNL 122
RQLG L SV+++ +F R+ L + +E+Y+ + NW++VK +PGNL
Sbjct: 61 RQLGRDDKSGLPSVTMTVTVFRQFLREALY-KLSKRVEIYQSTSGRMNWKVVKQASPGNL 119
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
E+ L + + P+I+A+ + + ++G+ + D + R LG++EFLD+ ++N
Sbjct: 120 QDVEEEL--GGQFEAAPMILAVKITAKASEARSVGVCFADASVRELGVSEFLDNDLYSNF 177
Query: 182 ESALVALGCKECLLPTEAV----KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLD 237
E+ L+ LG +ECL+ + + E LR + CGV ++ER EF T+D+ QDL
Sbjct: 178 EALLIQLGVRECLIQADKAEKDKRDPELTKLRQIIDNCGVAVSERSAVEFGTKDIEQDLA 237
Query: 238 RLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
RL++ + +++ G+ AL+ Y +L D SN+G Y + ++ L +M+LD+AA
Sbjct: 238 RLLKDERAVTLLPQTELKLSMGSAAALIKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAAA 297
Query: 298 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
++ALN++ D K+ S++GL+N C G RLL WLKQPL+ +I R +V+AF
Sbjct: 298 LKALNLMPGPRDGAKSMSVYGLLNH-CKTPNGSRLLSQWLKQPLMSKQDIEKRQQLVEAF 356
Query: 358 VDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
DT LRQ +++ HL+ + D+ RL ++++A L+ +V+ YQ IRLP + G
Sbjct: 357 ASDTELRQTMQEEHLRSVPDLYRLAKRFQRKKANLEDVVRAYQVIIRLP-------GFLG 409
Query: 417 QFSSLIKERYLDPLESL------TDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
++ E Y DPL+ T D L K +VET+VDLD L+ EY+I +D L
Sbjct: 410 TLEGVMDEAYRDPLDEAYTSKLRTLSDSLVKLQEMVETTVDLDALDRHEYVIKPEFDDSL 469
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
++ + + +R I + A DL +K + L+ G+ R+T+ E IR K
Sbjct: 470 RIIRKKLDKAKRDIDQEFNKAAHDLGQEKEKKIFLENHKVHGYCMRLTRTEAGCIRNK-- 527
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+ + T+K+GV FT L+ L ++ + + Y Q LVN V+ A ++ + + LA
Sbjct: 528 SGYQECSTQKNGVYFTTRNLQNLRREFDQQSQNYNRTQASLVNEVVGVAASYCPVLEKLA 587
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L+ LDV++SFA + P Y RP ++ G +L+ +RHPC+E QD V FI ND +
Sbjct: 588 AVLAHLDVIISFAHCSVHAPIEYVRPKMHKRGEGQTVLKEARHPCLEMQDDVQFITNDVE 647
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L + KS F IITGPNMGGKST+IRQ+GV LMAQVG FVPC A +++ D I ARVGA D
Sbjct: 648 LTKDKSSFLIITGPNMGGKSTYIRQIGVIALMAQVGCFVPCAEAEMTIFDSILARVGASD 707
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V+EI
Sbjct: 708 SQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGC 767
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST-----SRKLTMLYKVEPG 825
+FATHFHELTALA ++A V N HV+AHI + R++T+LYKVE G
Sbjct: 768 SAMFATHFHELTALADQHAQ---------VKNLHVTAHISGSEEGDAKREVTLLYKVEDG 818
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
CDQSFGIHVAE FP+ VV +A+ KA ELEDFT
Sbjct: 819 ICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFT 853
>gi|390599866|gb|EIN09262.1| DNA mismatch repair protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 978
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/899 (41%), Positives = 542/899 (60%), Gaps = 65/899 (7%)
Query: 11 LKLDAKQARGFLSFYKTLPNDTR----AVRFFDR----RDYYTAHGENATFIAKTYYHTT 62
L LD GF SF+ LP + +R F R +DY++AHG +A ++A+ +HT
Sbjct: 14 LDLDTVTDPGFCSFFAKLPAKSPETHGTLRLFARHASDKDYFSAHGPDAHYVAQHVFHTN 73
Query: 63 TALRQLGTGSDA-----LSSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNW 111
+ ++ LG GS L+SV++++ M + R+ L + +E++ +G G + +
Sbjct: 74 SVIKWLGKGSSGPNKTGLASVTMNEMMAKGFLREALTAK-QLRVEIWVPEKGQGKKATKF 132
Query: 112 RLVKSGTPGNLGSYEDVLFANNEMQDTPVIVAL--FPNFRENGCT--------IGLGYVD 161
L K +PGNL + ED+LF N ++ P+++A+ + G T IG+ + D
Sbjct: 133 VLDKEASPGNLQAVEDMLFVNTDLMTAPMVMAIKIASSSGPPGSTYVKATTKNIGVAFAD 192
Query: 162 LTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAV-----KSSECKTLRDALTRCG 216
T R +G+A+F D+ F+N ES ++ LG KECL+PT V + + L+ L RCG
Sbjct: 193 TTLREIGVADFADNDLFSNTESLIIQLGIKECLVPTGTVSGKTDRDVDLNKLKAVLERCG 252
Query: 217 VMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS----GFEIAPGALGALLSYAELLS 272
V+ TERK +EF +R + DL RL++ + +AP +L AL++Y LLS
Sbjct: 253 VVCTERKPSEFNSRSVEDDLTRLLKPEASSSTTASTSEQLSLPVAPASLNALITYLSLLS 312
Query: 273 DESNYGNYYIRKYSLDSYMRLDSAAMRALNVLES---KTDANKNFSLFGLMNRTCTAGMG 329
D +N+G + IR + L +M+LD++A+RALN+++ +T ANKN +L GL+N+ C G
Sbjct: 313 DPANHGTWTIRTHDLSQFMKLDASALRALNLVDGPNGETSANKNTTLLGLLNK-CKTAQG 371
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRR 388
R+L WLKQPL++++EI R D+V+ FV+D R+ L+ ++LK + D+ R+ +K
Sbjct: 372 TRMLASWLKQPLVNLHEIRKRQDLVEIFVEDANSRRTLQDEYLKLMPDLHRISKRFQKNA 431
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQYEG---QFSSLIKERYLDPLESLTDDDHLNKFIAL 445
A L+ +V++YQ+ ++LP I +L E LI E YL L D LNK+ +
Sbjct: 432 ASLEDVVRVYQAVLKLPGIIESLANVESTSMHAKELIDEIYLVKLREY--DGSLNKYGEM 489
Query: 446 VETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKL 505
VET++DL++L+N Y+I YD L L + + H++ DL L +DK + L
Sbjct: 490 VETTIDLNELDNHNYVIKPDYDPKLQELAEKLMKTRDGLDDEHREVGRDLGLELDKQIFL 549
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
+ +G+ FR+TK + K + L T K G FT + L+ L ++Y+ + + Y
Sbjct: 550 ENSPTYGYCFRLTKGVSKAVHNK--KNYYELATTKSGAFFTTSNLRDLANEYKDLTDLYA 607
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
Q LV ++ A T++ + + +L+ LDV+LS A +A + P Y +P +
Sbjct: 608 RTQAGLVKEIVSIASTYTPVLELFNVVLAHLDVILSMAHVAVNAPEAYVKPKVLQKGSSS 667
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
+IL+ +RHPC+E QD ++FIPND ++I+G+ FQIITGPNMGGKST+IRQVGV LMAQV
Sbjct: 668 LILKAARHPCLEVQDDISFIPNDVEMIKGEGEFQIITGPNMGGKSTYIRQVGVIALMAQV 727
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
GSFVPC+ A + + D I RVGAGD QL+G+STFM EMLETA+IL+ A+ SLIIIDELG
Sbjct: 728 GSFVPCEEAQLPIFDSILCRVGAGDSQLKGISTFMAEMLETAAILRSASSNSLIIIDELG 787
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I A +FATHFHELT+L +Q+ V N HV
Sbjct: 788 RGTSTYDGFGLAWAISEHIASKIHAFCMFATHFHELTSL---------DQQLPHVRNLHV 838
Query: 806 SAHIDS-----TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
AH+ R +T+LYKVEPG CDQSFGIHVAE ANFP+SVV LAR KA ELEDF
Sbjct: 839 VAHVSKRGSELNDRDITLLYKVEPGVCDQSFGIHVAELANFPQSVVKLARRKANELEDF 897
>gi|393219867|gb|EJD05353.1| DNA mismatch repair protein MSH2 [Fomitiporia mediterranea MF3/22]
Length = 962
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/917 (40%), Positives = 553/917 (60%), Gaps = 64/917 (6%)
Query: 21 FLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDA--LSS 77
F+SF+ LP +R FDRRD+++AHGE+AT+IA + T + L+ LG+G A L S
Sbjct: 22 FISFFSKLPPKRADTIRLFDRRDFFSAHGEDATYIAMQVFRTQSVLKYLGSGGKASGLPS 81
Query: 78 VSVSKNMFETIARDLLLERTDHTLELY--EGS--GSNWRLVKSGTPGNLGSYEDVLFANN 133
V++S N+ RD L +E++ EG G+ +RL K +PGNL + ED+LF N
Sbjct: 82 VTLSNNVATAFLRDALTS-LQLRIEIWVSEGGKKGAKFRLEKEASPGNLQAVEDLLFVNT 140
Query: 134 EMQDTPVIVALFPNFRENGCT---------IGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+M P+++A+ G +G+ + D + R +G++EF+D F+N+ES
Sbjct: 141 DMLSAPIVMAVKIGTSTLGAAGSSGIKTKAVGVAFADTSVREIGISEFVDSDLFSNIESL 200
Query: 185 LVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
++ L KE ++P + + E L+ RCGV++TERK ++F +++ QDL L
Sbjct: 201 VIQLSVKEAVIPMSSKTGNTDRDLELNKLKGVFERCGVVITERKPSDFAAKNIEQDLALL 260
Query: 240 VRGSV-----EPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
V+ + + +L S A A AL+SY LL D SN+ Y ++ + L +M+LD
Sbjct: 261 VKTNTGVDITASIPELSSSTSAAASATSALISYLSLLGDASNHNAYVLKTHDLSQFMKLD 320
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
++A+RAL + T + KN +L GL+N+ C G G RLL WLKQPL++++EI R D+V
Sbjct: 321 ASALRALGLAGDSTTSAKNTTLHGLLNK-CKTGQGTRLLGSWLKQPLVNLHEIQKRQDLV 379
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
Q F+ D+ R+ L+ +L+ + D+ R+ ++ A L+ +V++YQ++ +L + AL+
Sbjct: 380 QTFIHDSNTRRTLQDDYLRMMPDMHRISKRFQRSVATLEDVVRVYQAAQKLVGLIEALET 439
Query: 414 YEGQ---FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
E + + LI+E YL L+ + + L K+ +VE ++DLD+L + ++I YD L
Sbjct: 440 VETEDVGHNKLIEEIYLIKLKEHSQN--LEKYSEMVEQTLDLDELSSHNFVIKPDYDDRL 497
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
L ++ + + + H++ DL L +DK L L+ +G+ FRITK + I +
Sbjct: 498 RELADKLIEIRDGLDAEHRKVGRDLGLELDKKLHLENSQNYGYCFRITKSDAKVIHNE-- 555
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+I L T K GV FT KL+ L +Q++ + Y Q LV V+ A T++ + ++L
Sbjct: 556 KDYIELGTNKSGVYFTTKKLRSLAMDFQEITDTYSRTQSSLVKEVVNIAATYTPVLEALD 615
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
++ LDV++SFA ++++ P Y RP ++ G ++L+ +RHP +E QD ++FIPND +
Sbjct: 616 DQIAHLDVIVSFAHVSANAPEEYVRPKLSVKGSGSVVLKNARHPLLEVQDDISFIPNDVE 675
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
+I+G+S FQIITGPNMGGKST+IRQVGV LMAQ G FVPC A + + D I RVGAGD
Sbjct: 676 MIKGESEFQIITGPNMGGKSTYIRQVGVIALMAQTGCFVPCSEAELPIFDSILCRVGAGD 735
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLETA+ILK A+ SLIIIDELGRGTSTYDGFGLAWAI E++ EI A
Sbjct: 736 SQLKGVSTFMAEMLETATILKSASQDSLIIIDELGRGTSTYDGFGLAWAISEYIASEIHA 795
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS-----RKLTMLYKVEPG 825
LFATHFHELTAL +Q+ V N HV AH+ T R +T+LYKVEPG
Sbjct: 796 FCLFATHFHELTAL---------DQQIPHVKNLHVVAHVSKTGESSQDRDITLLYKVEPG 846
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPND 885
CDQSFGIHVAE ANFPESVV LA+ KA ELEDF G K+ + P +
Sbjct: 847 ICDQSFGIHVAELANFPESVVKLAKRKADELEDFG-------------GEHEKQPTHPKE 893
Query: 886 M-SRGAARAHQFLKEFS 901
+ G+ Q L+E++
Sbjct: 894 IVDEGSKIVEQLLQEWT 910
>gi|393235788|gb|EJD43340.1| DNA mismatch repair protein [Auricularia delicata TFB-10046 SS5]
Length = 967
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/881 (42%), Positives = 544/881 (61%), Gaps = 54/881 (6%)
Query: 20 GFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
F +F+ L +R FDR +YYT HG++A F+A + TT ++ LG G L+SV
Sbjct: 29 AFCTFFHKLVQSDDTIRLFDRGEYYTVHGKDADFVALHVFRTTQVVKVLGKGMRKLNSVV 88
Query: 80 VSKNMFETIARDLLLERTDHTLELY---EGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQ 136
+ + ++ R+ L R +E++ + + W L + +PGNL ED+LF N +M
Sbjct: 89 LRPVLAKSFLREALTAR-QMRIEIWGIEDKKANKWALQRQASPGNLQDVEDLLFVNEDMS 147
Query: 137 DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLP 196
P+++A+ + + +G+ + D + R +G+AEF+D+ F+N ES L+ LG KECLL
Sbjct: 148 SAPIVMAVKLSSKGETKNVGVAFADASNREIGVAEFVDNDLFSNTESLLIQLGVKECLLQ 207
Query: 197 T----------EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--GSV 244
+ E K + L L RC ++ T RK +F R++ DL RL++ +V
Sbjct: 208 SDEKKKEAADDEKKKDMDLAKLAQILERCNIVHTARKAADFTGRNIEDDLRRLLKEDTTV 267
Query: 245 EPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL 304
+ +L ++A A AL +Y L+SD++N+G Y +R++ L YMRLD++ +RAL +
Sbjct: 268 AALPEL--DLKLAMQATAALTAYLALVSDDTNHGRYALRRHDLAQYMRLDASGVRALGLF 325
Query: 305 ESKTDA------NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV 358
+ D KN +LFGL+N+T T G G RLL WLKQPL++++EI R D+V+ F
Sbjct: 326 PAPQDQTLGGQRGKNTTLFGLLNKTRT-GQGARLLARWLKQPLVNLHEIKKRQDLVEVFA 384
Query: 359 DDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ 417
+D RQ ++ + LK + D R+ +K+ AGLQ +V++YQ+ +LP + L++ +G+
Sbjct: 385 EDGDARQTIQMEFLKAMPDFHRIGKRFQKKVAGLQDVVRVYQAVQKLPPLIDNLEEMQGK 444
Query: 418 F----SSLIKERYLDPLE-SLTDDDH--LNKFIALVETSVDLDQLENG--EYMISSSYDT 468
S L++ ++ PL+ SL ++H L K+ +VET++DL++L+ Y+I S +D
Sbjct: 445 LTQHQSDLVQSFFVQPLKASLHTNNHTLLEKYGEMVETTIDLEELDRSPNNYIIRSEHDE 504
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKK 528
L+ L + + H + DL L +DK L L+K ++G+VFR++K + I K
Sbjct: 505 QLAKLATTIRRVRDGLDKEHAKAGRDLGLELDKKLHLEKNDKYGYVFRVSKLDTKHIEGK 564
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+I L T+K G F L L ++ + E YK Q +LV +++ A +++E+ +
Sbjct: 565 RA--YIQLATQKTGTFFRTQALADLATEFAEAAESYKAKQAQLVKEIVEVAASYTEVLLA 622
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPND 648
L +++ +DV+LSFA +A + PT Y +P + G++ L+ +RHPC+E QD ++FIPND
Sbjct: 623 LDDVIATMDVILSFAHVAMTAPTAYVKPTVLEMGTGNVQLKEARHPCMEVQDEISFIPND 682
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
++IRG S FQIITGPNMGGKST+IRQ+GV LMAQVGSFVPC+ A++ + D I ARVGA
Sbjct: 683 VEMIRGVSEFQIITGPNMGGKSTYIRQIGVIALMAQVGSFVPCESATVPIFDSILARVGA 742
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
GD QL+GVSTFM EMLETA+ILK AT SL+IIDELGRGTSTYDGFGLAWAI EH+ +I
Sbjct: 743 GDSQLKGVSTFMAEMLETATILKSATQNSLVIIDELGRGTSTYDGFGLAWAISEHIASQI 802
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI------DSTSRKLTMLYKV 822
RA LFATHFHELTAL H Q+ V N HV AH+ R +T+LYKV
Sbjct: 803 RAFCLFATHFHELTALDH---------QLPHVKNLHVVAHVAPRGTESKHDRDITLLYKV 853
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
+PG CDQSFGIHVAE ANFPESV LAR KA ELEDF+ A
Sbjct: 854 QPGICDQSFGIHVAELANFPESV--LARRKADELEDFSGPA 892
>gi|453084349|gb|EMF12393.1| DNA mismatch repair protein MSH2 [Mycosphaerella populorum SO2202]
Length = 956
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/888 (41%), Positives = 535/888 (60%), Gaps = 68/888 (7%)
Query: 9 PELKLDAKQARGFLSFYKTL----PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTA 64
PELK+D + GF+ + L P DT VR FDR +Y +AHG++A FIA+ Y T+
Sbjct: 5 PELKVDDEA--GFVKNFHQLEINKPTDT--VRIFDRGEYLSAHGDDAEFIARVQYKTSAV 60
Query: 65 LRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG-SNWRLVKSGTPGNLG 123
L+ LG S L SV+++ +F T R+ + R +E+ E SG W + K +PGNL
Sbjct: 61 LKTLGR-SPGLPSVTMTITVFRTFLREAIF-RLGRRIEVLESSGRGQWAVTKQASPGNLQ 118
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
ED L + P+I+++ + + N +G+ + D + R LG++EF+D+ ++N E
Sbjct: 119 DIEDDL--GGHVDSAPIILSVKVSAKANEARNVGVCFADASVRELGISEFVDNDIYSNFE 176
Query: 183 SALVALGCKECLLPTEAVKS-SECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
S ++ LG KECL+ + K +E L+ C + ER +F +D+ QDL R++R
Sbjct: 177 SLIIQLGVKECLIQVDTTKKDAELHKLKTIADNCNCAIAERPAGDFGKQDIEQDLTRILR 236
Query: 242 ----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G P DL ++A G+ AL+ Y ++SD SN+G Y + ++ L YM+LDS+A
Sbjct: 237 DEKAGGTLPQTDL----KLAMGSAAALIKYLGIMSDPSNFGQYQLYQHDLSQYMKLDSSA 292
Query: 298 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
++ALN++ D +K SL+GL+N C +G RLL WLKQPL+ + EI R +V+AF
Sbjct: 293 LKALNLMPGPRDGSKTMSLYGLLNH-CKTPVGSRLLAQWLKQPLMSLEEIEKRQQLVEAF 351
Query: 358 VDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
V+DT LRQ L++ HL+ I D+ RL ++++A L+ +V+ YQ +IRLP + G
Sbjct: 352 VNDTELRQTLQEDHLRSIPDLYRLAKKFQRKKANLEDVVRAYQVAIRLP-------DFIG 404
Query: 417 QFSSLIKERYLDPLESLTDD---DHLNKFIAL---VETSVDLDQLENGEYMISSSYDTGL 470
F ++ E Y D L+++ + DH + F+ L VET+VDL+ L+N E++I +D L
Sbjct: 405 TFEGVMDETYKDALDAVYTNKLRDHSDSFVKLQEMVETTVDLEALDNHEFIIKPEFDDTL 464
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
++ + + L I H++ DL + +K L L+ G FR+T+ E IR K
Sbjct: 465 RVIRKKLDKLRYDIDKEHRRAGDDLGMDTEKKLLLENHRVHGWCFRLTRAEAAVIRGK-- 522
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
Q+ + T+K+G FT +L ++ ++ ++ E Y Q LV V+ A ++S + + LA
Sbjct: 523 KQYPEIATQKNGTYFTTPRLSEMRREFDQLSENYNRTQSGLVQEVVNVAASYSPVIEQLA 582
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L+ LDV++SFA ++ PT Y RP ++P G IL+ +RHPC+E QD + FI ND
Sbjct: 583 GVLAHLDVIVSFAHVSVHAPTAYVRPKMHPRGTGSTILKEARHPCMEMQDDIQFITNDVS 642
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L R S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D
Sbjct: 643 LTRESSEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTLFDCILARVGASD 702
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLET++ILK AT SL+IIDELGRGTSTYDGFGLAWAI EH++ EI A
Sbjct: 703 SQLKGVSTFMAEMLETSNILKTATKESLVIIDELGRGTSTYDGFGLAWAISEHIITEIGA 762
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS----------------- 813
T+FATHFHELTAL + V N HV AHI++ +
Sbjct: 763 YTMFATHFHELTALVDTHPQ---------VQNLHVVAHIENGNEEGGEDVHMTNSGNNNH 813
Query: 814 --RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
R++T+LYKV PG DQSFGIHVAE FP+ VV +A+ KA ELEDF
Sbjct: 814 RRREVTLLYKVVPGISDQSFGIHVAELVRFPQKVVNMAKRKAEELEDF 861
>gi|409075410|gb|EKM75790.1| hypothetical protein AGABI1DRAFT_131867 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 976
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/901 (40%), Positives = 546/901 (60%), Gaps = 80/901 (8%)
Query: 20 GFLSFYKTLPN---DTRAVRFFDRRD----YYTAHGENATFIAKTYYHTTTALRQLGTGS 72
GFL F+ +LP +T +R F+R +Y A+G +A F+A+ +HT + ++ LG G+
Sbjct: 19 GFLDFFNSLPKKSPETGTLRLFNRTSGGDSFYCAYGPDAVFVAQHVFHTKSVIKYLGAGA 78
Query: 73 DALSSVSVSKNMFETIARDLLLERTDHTLELYEG------SGSNWRLVKSGTPGNLGSYE 126
L SV++ ++ + + R+ L + +E+YE G+ +RL K +PGNL + E
Sbjct: 79 RRLESVTLKVSVAQMLLREALTSK-QLRVEIYESENGHGKKGTTFRLDKEASPGNLQAVE 137
Query: 127 DVLFANNEMQDTPVIVAL----FP----NFRENGCTIGLGYVDLTKRVLGLAEFLDDSHF 178
D+LF N+++ PV++A+ P + + IG+ + D + R LG+A+F+D+ F
Sbjct: 138 DLLFVNSDILSAPVVMAIQLANVPVSATGVKSSHKAIGVAFADTSVRELGVADFIDNDIF 197
Query: 179 TNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
+N ES ++ L KE +LPT + + ++ L RCGV++TERK +EF+++++
Sbjct: 198 SNTESLIIQLSVKEAILPTGTSAGTTERDIDLNKMKGVLERCGVVITERKPSEFRSKNIA 257
Query: 234 QDLDRLVRGSVEPVRDLVSGFEI-------APGALGALLSYAELLSDESNYGNYYIRKYS 286
DL RL++ S PV + I AP AL AL+ Y LL+D+SN G+Y +R +
Sbjct: 258 DDLPRLLQ-SQSPVSTADASATISQLSLPTAPAALSALVQYLSLLTDDSNLGSYKLRTHD 316
Query: 287 LDSYMRLDSAAMRALNVLESKTDAN---KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
L YM+LD++A+RALN+ E+ KN +L GL+N+ C G RLL W+KQPL++
Sbjct: 317 LSQYMKLDASALRALNLTENSGTVGLGAKNTTLLGLLNK-CKTSQGTRLLGTWIKQPLVN 375
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
++ I R ++V+ F +++ R+ L+ +K ++RL ++ A L+ +V++YQ ++
Sbjct: 376 LHGIRKRQNLVEIFTNESTTRRILQARIKLY--LQRLGKRFKRGNASLEDVVRIYQVVLK 433
Query: 404 LPYIRS---ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
LP + + A+Q + + I E YL L+ D HL K+ +VE ++DLD+L+N Y
Sbjct: 434 LPGMITSLEAVQMVSQDYQAAIDEAYLSSLKE--HDSHLKKYSEMVEATLDLDELDNHNY 491
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+I YD L L + + + + S H DL++ +DK L L+ +G+ FR+TK
Sbjct: 492 VIKPDYDERLQQLAEKLKRVRDGLDSEHTVVGDDLNIELDKKLHLENNQVYGYCFRLTKT 551
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ K L+ +FI L T K GV FT LK L ++Y+ + + Y Q LV V+ A
Sbjct: 552 DA----KGLSKKFIELGTNKSGVYFTTKTLKNLAEEYKDLTQTYARTQNGLVKEVVNIAA 607
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG---------------- 624
T++ + ++L +++ LDV+LSFA ++ S P PY +P + +G
Sbjct: 608 TYAPVLETLDNVVAHLDVILSFAHVSVSAPIPYIKPTLLDKGIGFLSCGQYLAEYFEGSG 667
Query: 625 DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
+++L +RHPC+E QD +NFIPND ++++ +S FQIITGPNMGGKST+IR VGV LMAQ
Sbjct: 668 NLVLREARHPCLEVQDEINFIPNDIEMVKDRSEFQIITGPNMGGKSTYIRHVGVIALMAQ 727
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G FVPC+ A + V D + RVGAGD QL+GVSTFM EMLETA+IL+ A+ SLIIIDEL
Sbjct: 728 IGCFVPCEEAQLPVFDSVLCRVGAGDSQLKGVSTFMAEMLETATILRSASKDSLIIIDEL 787
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDGFGLAWAI EH+ +I A LFATHFHELTAL +Q+ V N H
Sbjct: 788 GRGTSTYDGFGLAWAISEHIATKIHAFCLFATHFHELTAL---------DQQLSHVKNLH 838
Query: 805 VSAHIDSTS-----RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
V AH+ R +T+LYKVEPG DQSFGIHVAE ANFPE+VV LA+ KA ELEDF
Sbjct: 839 VVAHVTQNGSNIRDRDITLLYKVEPGISDQSFGIHVAELANFPENVVKLAKCKADELEDF 898
Query: 860 T 860
T
Sbjct: 899 T 899
>gi|452840462|gb|EME42400.1| hypothetical protein DOTSEDRAFT_54773 [Dothistroma septosporum
NZE10]
Length = 923
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/945 (40%), Positives = 561/945 (59%), Gaps = 77/945 (8%)
Query: 9 PELKLDAKQARGFLSFYKTL----PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTA 64
PELK++ + GF+ + L P DT +R FDR D+ +AHG++A +IA+ Y TT+
Sbjct: 5 PELKVEDEA--GFVKTFHQLEIQKPTDT--IRIFDRGDFLSAHGDDAEYIARMQYKTTSV 60
Query: 65 LRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-WRLVKSGTPGNLG 123
L+ LG L SV+++ +F T R+ + R +E+ + SG N W++VK +PGNL
Sbjct: 61 LKTLGKN---LQSVTMTVTVFRTFLREAIF-RLGRRVEVLQTSGRNQWKVVKQASPGNLQ 116
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
ED L ++ P+I+A+ + + N +G+ + D + R LG++EF+D+ ++N E
Sbjct: 117 DIEDDL--GGHVESAPIILAVKVSSKANEARNVGVCFADASVRELGVSEFVDNDIYSNFE 174
Query: 183 SALVALGCKECLLPTEAVKS-SECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
S ++ LG KECL+ + K +E LR C ++ER +F +D+ QDL RL+R
Sbjct: 175 SLIIQLGVKECLVQVDMTKKDAELHKLRTIADNCNCAVSERPAGDFGKQDIEQDLTRLLR 234
Query: 242 ----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G+ P DL ++A G+ AL+ Y ++SD SN+G Y + ++ L YM+LDS+A
Sbjct: 235 DEKAGASLPQTDL----KLAMGSAAALIKYLGIMSDVSNFGQYQLYQHDLSQYMKLDSSA 290
Query: 298 MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
++ALN++ D K +L+GL+N +C +G RLL WLKQPL+ EI R +V+AF
Sbjct: 291 LKALNLMPGPRDGAKTMNLYGLLN-SCKTPVGSRLLAQWLKQPLMSQEEIERRQQLVEAF 349
Query: 358 VDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
V+DT LRQ L++ HL+ I D+ RL ++++A L+ +V+ YQ ++RLP + G
Sbjct: 350 VNDTELRQTLQEEHLRSIPDLYRLAKKFQRKKATLEDVVRAYQVALRLP-------DFIG 402
Query: 417 QFSSLIKERYLDPLES------LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
F ++ E Y D L+ L + K + +VET+VDL+ ++N E++I S +D L
Sbjct: 403 TFEGVMDEAYKDALDQEYTNKLLEFSNSFGKLLEMVETTVDLEAMDNHEFIIKSEFDDTL 462
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
++ + + L +I H+ +DL+ +K L L+ G R+T+ E IR K
Sbjct: 463 RVIRKKLDKLRYEIDREHQDVGADLNQDTEKKLLLENHRVHGWCLRLTRNEASVIRNKKK 522
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
Q I T+K+GV FT TKL ++ ++ ++ E Y Q LVN V+ A ++ + + LA
Sbjct: 523 YQEI--STQKNGVYFTTTKLAEMRREFDQLSENYNRTQSGLVNEVVNVAASYCPVIEKLA 580
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
+L+ LDV++SFA ++ PT Y RP I+P G IL+ +RHPC+E QD V FI ND
Sbjct: 581 GVLAHLDVIVSFAHVSVHAPTAYIRPKIHPRGTGSTILKEARHPCMEMQDDVQFITNDVS 640
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L+R +S F IITGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D
Sbjct: 641 LVREESEFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSEAELTLFDCILARVGASD 700
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLET++ILK AT SL+IIDELGRGTSTYDGFGLA+AI EH+++EI
Sbjct: 701 SQLKGVSTFMAEMLETSNILKTATKESLVIIDELGRGTSTYDGFGLAYAISEHIIKEIGC 760
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID-------------STSRKLT 817
++FATHFHELT+L V N HV AH+ S R++T
Sbjct: 761 YSMFATHFHELTSLVATYRQ---------VQNLHVVAHMGDGEDSVMDGDSHTSRRREVT 811
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKR 877
+LYKV PG DQSFGIHVAE FP+ VV +A+ KA ELEDF+ + ++V + +
Sbjct: 812 LLYKVVPGISDQSFGIHVAELVRFPQKVVNMAKRKADELEDFSGKREV-----VKVQASK 866
Query: 878 KRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKD 922
+ + M + R + E + E E+++RMKD
Sbjct: 867 DEVEQGSKMLKEVLRKWKVQVEAESLSKE--------EQIQRMKD 903
>gi|58259371|ref|XP_567098.1| DNA mismatch repair protein MSH2 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134107449|ref|XP_777609.1| hypothetical protein CNBA7300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260303|gb|EAL22962.1| hypothetical protein CNBA7300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223235|gb|AAW41279.1| DNA mismatch repair protein MSH2, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 965
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/889 (42%), Positives = 550/889 (61%), Gaps = 58/889 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
P +D F+ F + +P +R FDR DYY+AHG +A FIA Y TT L+
Sbjct: 14 PLFDMDKDSEEKFVRFVERMPTKLDGMIRLFDRGDYYSAHGADAIFIANEVYRTTNVLKY 73
Query: 68 LGTG----------SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG--------- 108
LG+G + L SV++S + + R+ L + +E+Y +G
Sbjct: 74 LGSGSKPSSSSGQYARGLPSVTISMALTKAFLREALTTK-QMRVEIYAPTGGVAPGSRKD 132
Query: 109 -SNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVL 167
S W + K+ +PGNL ED+LF++ ++ V +A+ ++ T+G+G+VD+ ++V+
Sbjct: 133 HSKWEISKTASPGNLSQVEDLLFSDRDLTANAVSMAIRVVVKDGINTVGVGFVDVQEKVV 192
Query: 168 GLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEF 227
G++EF+DD +F+N ES L+ LG KEC+L + K E LR + CGV++T+RK +EF
Sbjct: 193 GVSEFVDDENFSNTESLLIQLGVKECILQADE-KRPELAKLRMLVEWCGVIVTDRKSSEF 251
Query: 228 KTRDLVQDLDRLVR----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIR 283
+T+++ QDL+RL+ G+ P DL +IA AL AL++Y LLSD S +G +
Sbjct: 252 QTKNVEQDLNRLLHESHAGAALPEFDL----KIAMSALSALINYLSLLSDLSLHGQLRLY 307
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTD--ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++ L YM+LD++A++ALN++ + + NKN S++GL+NR C G RLL WLKQPL
Sbjct: 308 RHDLSQYMKLDASALKALNLMPNPQELGGNKNMSIYGLLNR-CKTSQGTRLLGRWLKQPL 366
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQS 400
++ +EI R +V+ FV+D+ RQ ++ ++LK++ D R+ KR AGL+ +V++YQ+
Sbjct: 367 VNRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKRVAGLEDVVRVYQA 426
Query: 401 SIRLPYIRSALQQY---EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLEN 457
LP ++ L+ E LI+E +L PL + L + ++VE ++DLD+L N
Sbjct: 427 VQLLPGLQEILENADTPEPGARDLIEEIWLKPLREHIE--KLGNYSSMVEDTIDLDELAN 484
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
Y+I + D L + E ++ Q+ H++ SDL L +DK L L+ + + FRI
Sbjct: 485 HNYVILPTIDEDLQRYREELLNVRDQLDDEHRRVGSDLGLDIDKKLHLENHQVYKYSFRI 544
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ 577
TK E IR K ++I L T+K G FT LK L ++Y ++ E Y+ Q+ LV V+
Sbjct: 545 TKAEASLIRNK--KEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQRHLVKEVVS 602
Query: 578 TAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE 637
A +++ + + L +++ +DV++S A ++S P PY +P + GD+++ G+RHPC+E
Sbjct: 603 IASSYTPVLEMLDNLIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVVLGARHPCLE 662
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
QD + FIPND ++ +G S F I+TGPNMGGKST+IRQ+GV LMAQVG FVP A +
Sbjct: 663 VQDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCFVPATEARLP 722
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
+ DCI ARVGAGD QL+GVSTFM EMLETA+IL+ AT SLIIIDELGRGTSTYDGFGLA
Sbjct: 723 IFDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGLA 782
Query: 758 WAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID------- 810
WAI E++ E I LFATHFHELT+L+ +N++ V N HV A +
Sbjct: 783 WAISEYIAETIHCFCLFATHFHELTSLSEKNSH---------VKNLHVEALVKDKDGEGG 833
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
+ R +T+LY+V+ G CDQSFGIHVAE ANFPESVV LA+ KA ELEDF
Sbjct: 834 AKERDITLLYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDF 882
>gi|321250171|ref|XP_003191714.1| DNA mismatch repair protein MSH2 [Cryptococcus gattii WM276]
gi|317458181|gb|ADV19927.1| DNA mismatch repair protein MSH2, putative [Cryptococcus gattii
WM276]
Length = 964
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/888 (42%), Positives = 548/888 (61%), Gaps = 57/888 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
P +D F+ F + +P +R FDR DYY+AHG +A FIA Y TT L+
Sbjct: 14 PLFDMDKDSEEKFVRFVERMPTKLDGMIRLFDRGDYYSAHGADAIFIANEVYRTTNVLKY 73
Query: 68 LGTG---------SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG---------- 108
LG+G + L SV++S + + R+ L + +E+Y +G
Sbjct: 74 LGSGKPSSSSGSYARGLPSVTISMALTKAFLREALTTK-QMRIEIYAPTGGVAPGSRKDH 132
Query: 109 SNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLG 168
S W + K+ +PGNL ED+LF++ ++ V +A+ ++ T+G+G+VD+ ++V+G
Sbjct: 133 SKWEISKTASPGNLSQVEDLLFSDKDLTANAVSMAIRVVVKDGVNTVGVGFVDVQEKVVG 192
Query: 169 LAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFK 228
++EF+DD +F+N ES L+ LG KEC+L + K E LR + CGV++T+RK +EF+
Sbjct: 193 VSEFVDDENFSNTESLLIQLGVKECILQADE-KRPELAKLRMLVEWCGVIVTDRKSSEFQ 251
Query: 229 TRDLVQDLDRLV----RGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRK 284
T+++ QDL+RL+ G+ P DL +IA AL AL++Y LLSD S +G + +
Sbjct: 252 TKNVEQDLNRLLDESHAGAALPEFDL----KIAMSALSALINYLSLLSDLSLHGQLRLHR 307
Query: 285 YSLDSYMRLDSAAMRALNVLESKTD--ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ L YM+LD++A++ALN++ + + N+N S++GL+NR C G RLL WLKQPL+
Sbjct: 308 HDLSQYMKLDASALKALNLMPNPQELGGNRNMSIYGLLNR-CKTSQGTRLLGRWLKQPLV 366
Query: 343 DVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +EI R +V+ FV+D+ RQ ++ ++LK++ D R+ KR AGL+ +V++YQ+
Sbjct: 367 NRHEIIQRQTMVEVFVEDSVNRQSIQTKYLKQMPDFHRISKKFHKRVAGLEDVVRVYQAV 426
Query: 402 IRLPYIRSALQQY---EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENG 458
LP ++ L+ E LI+E +L PL + L + ++VE ++DLD+L N
Sbjct: 427 QLLPGLQEILENANTPEPGARDLIEEIWLKPLREHIE--KLGNYSSMVEDTIDLDELANH 484
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
Y+I + D L ++E + Q+ H++ +DL L +DK L L+ + + FRIT
Sbjct: 485 NYVILPTIDEDLQRHRDELLDVRDQLDDEHRRVGNDLGLDIDKKLHLENHQVYKYSFRIT 544
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K E IR K ++I L T+K G FT LK L ++Y ++ E Y+ Q+ LV V+
Sbjct: 545 KAEASLIRNK--KEYIDLATQKSGTIFTTKTLKALSEEYFRLQELYEKQQRHLVKEVVSI 602
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
A +++ + + L M++ +DV++S A ++S P PY +P + GD+++ G+RHPC+E
Sbjct: 603 AASYTPVLEMLDNMIAAVDVIVSMAHVSSEAPIPYVKPILTEKGTGDVVVLGARHPCLEV 662
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
QD + FIPND ++ +G S F I+TGPNMGGKST+IRQ+GV LMAQVG FVP A + +
Sbjct: 663 QDDIVFIPNDHEMRKGDSEFIILTGPNMGGKSTYIRQIGVIALMAQVGCFVPATEAQLPI 722
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
DCI ARVGAGD QL+GVSTFM EMLETA+IL+ AT SLIIIDELGRGTSTYDGFGLAW
Sbjct: 723 FDCILARVGAGDNQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGLAW 782
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID-------S 811
AI E++ E+I LFATHFHELT L+ +N + V N HV A +
Sbjct: 783 AISEYIAEKIHCFCLFATHFHELTTLSEKNPH---------VKNLHVEALVQDKDGEGGG 833
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
R +T+LY+V+ G CDQSFGIHVAE ANFPESVV LA+ KA ELEDF
Sbjct: 834 KERDITLLYQVKEGICDQSFGIHVAELANFPESVVKLAKRKAEELEDF 881
>gi|358059739|dbj|GAA94508.1| hypothetical protein E5Q_01160 [Mixia osmundae IAM 14324]
Length = 1575
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/859 (42%), Positives = 543/859 (63%), Gaps = 44/859 (5%)
Query: 20 GFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG-TGSDALSS 77
F ++ LP + +R F+R++ YTAHG++A F+A + T T L G +GS A+ S
Sbjct: 638 AFCKAFRALPAKSAGTLRIFERQEDYTAHGDDAVFVATHVFKTNTVLTYWGGSGSAAVPS 697
Query: 78 VSVSKNMFETIARDLLLERTDHTLELYEGSGS-----NWRLVKSGTPGNLGSYEDVLFAN 132
+S+++ + R+ L R +E+++ S S LV+ +PGNLG ED+LF N
Sbjct: 698 CKMSRSVATNLLREALTLR-QLRIEIWKDSSSKTSSAQLTLVRQASPGNLGDVEDLLFGN 756
Query: 133 NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE 192
++ +PVI+A+ + ++ TIG+ Y D + R +GL EF+D+ F+N ES LV LG KE
Sbjct: 757 IDLVSSPVIMAIRLSTKDGITTIGMAYADTSLRRIGLTEFVDNDLFSNTESLLVQLGVKE 816
Query: 193 CLLPT-EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVE----PV 247
L+ + E K E + LR + RC V++T+RK ++F R++ QDL+RL+RGS P
Sbjct: 817 VLMASFEKSKEYEAEKLRQLIDRCSVVITDRKPSDFNIRNIEQDLNRLLRGSPAIATLPE 876
Query: 248 RDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK 307
DL SG A+ AL+ Y LL+DESN+G Y ++ + L YMRLD++A+RALN++
Sbjct: 877 SDLRSGM----SAVNALIVYLGLLTDESNFGQYDLKSHDLSQYMRLDASAVRALNLVPDP 932
Query: 308 TD---ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALR 364
+ NKN S+FGL+NR C G RLL WLKQPL+++++I R D+V+ V+D LR
Sbjct: 933 SGYGGGNKNMSIFGLLNR-CKTAQGMRLLAQWLKQPLVNLHQIEKRQDLVEIMVEDNFLR 991
Query: 365 QDLRQHLKR-ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFS--S 420
+ L++ + R + D+++L L + A L+ +V++YQ SI+LP + + L+ EG + +
Sbjct: 992 ESLQEDILRAMPDLQKLAKKLRRGVATLEDVVRIYQVSIKLPDLINHLETVGEGAPAKLA 1051
Query: 421 LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESL 480
LIKE YL L ++ L K++ +VET++DLD+L N Y+I +D L ++ + ++
Sbjct: 1052 LIKESYLSALTE--NNTALEKYVEMVETTLDLDELANHRYIIKPDFDDELKRIQKKLNAI 1109
Query: 481 ERQIHSLHKQTASDLDLPVD-KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR 539
+ + +++ A DL + +D K L + +G VFR+T+KE K++ K +I L +
Sbjct: 1110 RKGLDDVYRDVAEDLGVAMDGKVLHFENNPTYGQVFRLTRKESAKLKGK--PGYIDLANK 1167
Query: 540 KDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVL 599
+G+ FT KLK L + Q E Y Q LV V+ A ++ I + L T +++LDV+
Sbjct: 1168 TNGLTFTTKKLKALNEDQQDCKESYTRKQSSLVKEVVAIAASYDTILEDLNTTIADLDVI 1227
Query: 600 LSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQ 659
+S + +A + PY +P ++ G ++ +RHPC+EAQD ++FI ND + +RG+S FQ
Sbjct: 1228 VSLSHVAVNAVGPYVKPKLHEKGQGKLVFREARHPCLEAQDDISFIANDHEFVRGESEFQ 1287
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
IITG NMGGKST+IRQVG LMA +GS+VPC A + + DCI ARVGAGD QL+GVSTF
Sbjct: 1288 IITGANMGGKSTYIRQVGCIALMACIGSYVPCTEAELPIFDCILARVGAGDSQLKGVSTF 1347
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M EMLETA+ILK AT SLIIIDELGRGTST+DGFGLA+AI EH+ +EIRA TLFA+HFH
Sbjct: 1348 MSEMLETATILKSATKDSLIIIDELGRGTSTFDGFGLAYAISEHIAKEIRAFTLFASHFH 1407
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDS-----TSRKLTMLYKVEPGACDQSFGIH 834
E+T+LA E + V N HV A ++ T R +T LYKVEPG DQSFGIH
Sbjct: 1408 EITSLAQE---------VPSVRNMHVLALVEEKPDSLTGRDVTFLYKVEPGISDQSFGIH 1458
Query: 835 VAEFANFPESVVTLAREKA 853
VA+ A FP+ V+ LA+ KA
Sbjct: 1459 VAQLARFPDEVIKLAKRKA 1477
>gi|392587833|gb|EIW77166.1| DNA mismatch repair protein [Coniophora puteana RWD-64-598 SS2]
Length = 960
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/879 (41%), Positives = 531/879 (60%), Gaps = 56/879 (6%)
Query: 20 GFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGT--GSDA 74
GF+SF+ LP +T VR FDR D+Y+ HG +A F+A + T + ++ LG+
Sbjct: 22 GFVSFFSKLPKKSPETGTVRLFDRGDFYSTHGSDALFVAANVFRTNSVIKHLGSRAAGGG 81
Query: 75 LSSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNWRLVKSGTPGNLGSYEDV 128
L+SV++S+ + R+ L R +E++ G G + + L K +PGNL ED+
Sbjct: 82 LASVTLSRTLAHAFLREALTAR-QLRVEIWVPAPGQGKKAAKFVLDKEASPGNLQPVEDL 140
Query: 129 LFANNEMQDTPVIVAL-------FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
LF N ++ P+++AL R G +G+ Y D + R LG+A+F+D+ F+N
Sbjct: 141 LFGNTDVLSAPIVMALRLSTTPAVDKTRTKG--VGIAYADTSTRELGVADFVDNDLFSNT 198
Query: 182 ESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
ES ++ L KE L+PT + + + L+ RCGV++TERK ++F +++ L
Sbjct: 199 ESLIIQLSVKEALIPTGTISGNTDRDLDLNKLKAVFERCGVIVTERKPSDFTGKNVEDHL 258
Query: 237 DRLVRGSVEPVRDLVSGFEIAPGA---LGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
RL+ E PGA LGAL+SY L SD +N G Y +R + L YMRL
Sbjct: 259 QRLLPAPSADSSSDPQQLETPPGASAALGALISYLGLASDPANEGAYILRTHDLARYMRL 318
Query: 294 DSAAMRALNVLE---SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
D++A+RALN+ E S NKN +L GL+N+ C G RLL WLKQPL++++EI R
Sbjct: 319 DASALRALNLTEVPGSGGSINKNATLLGLLNK-CKTAQGTRLLGTWLKQPLVNLHEIRQR 377
Query: 351 LDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS 409
++V+ FV+D R+ L+ ++LK + D+ R+ +K A L+ +V++YQ ++++ +
Sbjct: 378 QNLVEVFVNDANGRRTLQDEYLKYMPDMHRISKRFKKSNASLEDVVRVYQVTLKMAGLLE 437
Query: 410 ALQQYE---GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSY 466
L+ + ++ +LIKE YL PL+ +++L+K+ +VE ++DL +L+N Y I Y
Sbjct: 438 TLETLDIEDDEYKALIKELYLGPLQQF--NENLSKYGEMVEQTLDLSELDNHNYAIRPDY 495
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
D L L + + + H+ +DL L +DK L L+ Q+G+ FR+TK + +
Sbjct: 496 DPRLQELAEKLMEIRDGLDEQHRDAGNDLRLELDKKLHLENSQQYGYCFRLTKNDAKVMM 555
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K ++I L T K GV FT KLK+ +Q+ EY Q LV V+ A T++ +
Sbjct: 556 K--NKKYIELGTIKSGVFFTTKKLKEFSGDFQETTAEYGRAQSGLVKEVVSIASTYTPVL 613
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIP 646
+SL +L+ LDV+ SFA ++ + P PY +P ++ ++L+ +RHPC+E QD ++FIP
Sbjct: 614 ESLDMVLAHLDVITSFAHVSMNAPEPYVKPIVSEKGASGLVLKDARHPCLEVQDDISFIP 673
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND ++ + + F IITGPNMGGKST+IRQVGV LMAQ+G FVPC A + + D I RV
Sbjct: 674 NDVEMAKDEGEFLIITGPNMGGKSTYIRQVGVIALMAQIGCFVPCSEARMPIFDSILCRV 733
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GAGD QL+GVSTFM EMLETASIL+ A+ SLIIIDELGRGTSTYDGFGLAWAI EH+
Sbjct: 734 GAGDNQLKGVSTFMAEMLETASILRSASKDSLIIIDELGRGTSTYDGFGLAWAISEHIAS 793
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK------LTMLY 820
EIRA +FATHFHELTAL E + V N HV AH+ ++ +T+LY
Sbjct: 794 EIRAFCMFATHFHELTALDQE---------LKHVKNLHVVAHVSQEAQSSTQDQDITLLY 844
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
KVEPG DQSFGIHVA ANFPE+VV LA+ KA ELEDF
Sbjct: 845 KVEPGVSDQSFGIHVARLANFPENVVKLAKRKADELEDF 883
>gi|392562297|gb|EIW55477.1| DNA mismatch repair protein [Trametes versicolor FP-101664 SS1]
Length = 967
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/923 (41%), Positives = 558/923 (60%), Gaps = 78/923 (8%)
Query: 5 QNKLPELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHT 61
+ K E ++D GF SF+ LP D+ VR F R +YY+ HG +A ++A + T
Sbjct: 7 KEKDAEYEIDNSSHPGFCSFFTKLPAKSPDSGTVRLFYRNEYYSVHGPDALYVATHVFRT 66
Query: 62 TTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNWRLVK 115
+ ++ LG G L SV++S+++ +T RD L + +E++ G G + + L K
Sbjct: 67 NSVIKYLG-GRAGLPSVTLSESLAKTFLRDALTSK-QLKVEIWVPEAGQGKKATKFVLDK 124
Query: 116 SGTPGNLGSYEDVLFANNEMQDTPVIVAL----FPNFRENGC----TIGLGYVDLTKRVL 167
+PGNL + ED+LF N ++ P+++A+ P + T+G+ Y D + R L
Sbjct: 125 EASPGNLSAVEDLLFVNTDIVSAPIVMAIKMASAPVTAGSNAAKTRTVGVAYADSSTREL 184
Query: 168 GLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTER 222
G+A+F+D+ F+N E+ ++ L KE ++PT + + K L++ L RCGV++TER
Sbjct: 185 GVADFVDNDIFSNTETLIIQLSVKEAIIPTGTASGTTERDFDLKKLKEVLDRCGVVITER 244
Query: 223 KKTEFKTRDLVQDLDRLVRGSVE------------PVRDLVSGFEIAPGALGALLSYAEL 270
K ++F T+ + DL RL+ S P L S AP AL AL+SY L
Sbjct: 245 KPSDFMTKSIADDLLRLLNPSSTPSSSSSDATATIPQLQLPS----APAALSALVSYLSL 300
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD--ANKNFSLFGLMNRTCTAGM 328
LSD SN+G + IR + L YMRLD++A+RALN+ E+ + +NKN +LFGL+N+ C
Sbjct: 301 LSDTSNHGAWSIRTHDLSQYMRLDASALRALNLTEAPGNIGSNKNTTLFGLLNK-CKTAQ 359
Query: 329 GKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKR 387
G RLL WLKQPL++ +EI R +V+AF DD R+ L+ +LK + D+ R+ +K
Sbjct: 360 GSRLLGSWLKQPLVNRHEILKRQSLVEAFFDDANSRRILQDDYLKLMPDMHRICKRFQKS 419
Query: 388 RAGLQQIVKLYQSSIRLPYIRSALQQYEGQFS---SLIKERYLDPLESLTDDDHLNKFIA 444
A L+ +V++YQ+ ++L + S ++ + +L++E YL D L+K+
Sbjct: 420 VASLEDVVRVYQAVLKLEGLISTIEGMDTSSEDQKALLEEAYLTKFREY--DTALSKYSE 477
Query: 445 LVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALK 504
+V+ ++DLD+LE+ ++I YD L L ++ + + + H+++ L L +DK L
Sbjct: 478 MVQQTLDLDELEHHNFVIKPDYDDRLRTLADKLGEVRDGLDAEHRKSGKALGLELDKKLH 537
Query: 505 LDKGTQFGHVFRITKKEEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
L+ Q+G+ FR+TK + K LT ++ L T K G+ FT + LK+L +Y ++
Sbjct: 538 LENSPQYGYCFRVTKAD----GKALTDDKRRWQELGTLKSGIFFTTSTLKELSTEYTELT 593
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++Y Q LV V+ A T++ I ++ +++ LDV++S A +A + P Y +P+I
Sbjct: 594 QQYSRTQSGLVKEVVNIASTYTPILEAWNNVIAYLDVVISLAHVAVNAPEAYVKPEILEK 653
Query: 622 DVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
G+++L+ +RHPC+E QD ++FIPND ++I+G S FQIITGPNMGGKST+IRQVGV L
Sbjct: 654 GSGNLVLKEARHPCLEVQDDISFIPNDVEMIKGDSEFQIITGPNMGGKSTYIRQVGVIAL 713
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ GSFVPC A + + D I RVGAGD QL+G+STFM EMLETA+IL+ A+ SLIII
Sbjct: 714 MAQTGSFVPCSEARVPIFDSILCRVGAGDSQLKGISTFMAEMLETATILRSASKDSLIII 773
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTSTYDGFGLAWAI EH+ +I A +FATHFHELTAL E + V
Sbjct: 774 DELGRGTSTYDGFGLAWAISEHIASQIHAFCMFATHFHELTALDQE---------IKHVK 824
Query: 802 NYHVSAHI-----DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
N HV AH+ + R +T+LYKVEPG CDQSFGIHVAE ANFPESVV LAR KA EL
Sbjct: 825 NLHVVAHVSDADAEGRDRDITLLYKVEPGVCDQSFGIHVAELANFPESVVKLARRKADEL 884
Query: 857 EDFT--------PSAVISDDAKI 871
EDF P+ V+ + +I
Sbjct: 885 EDFNTDKGEPELPAEVVEEGTQI 907
>gi|156376468|ref|XP_001630382.1| predicted protein [Nematostella vectensis]
gi|156217402|gb|EDO38319.1| predicted protein [Nematostella vectensis]
Length = 792
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/804 (44%), Positives = 510/804 (63%), Gaps = 37/804 (4%)
Query: 135 MQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
M + V++A+ +G+ Y D+ R LG+ EF D+ F+N+E+ +V LG KECL
Sbjct: 1 MSASAVVMAIKLGTVTGQRVVGVAYADVASRKLGVCEFADNDQFSNLEALIVQLGPKECL 60
Query: 195 LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR------GSVEPVR 248
+ + KT + + R +++TERKK EF +D+VQDL+RL++ + P
Sbjct: 61 MASTDSSGDAAKT-HEVVKRSNILVTERKKVEFSNKDIVQDLNRLLKLTAGGNSATLPEM 119
Query: 249 DLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT 308
D++ A AL A++ Y ELLSDESN+ + + + L YM+LD+AA+RALN+L +
Sbjct: 120 DMIH----ATAALAAVIKYLELLSDESNFSQFKLSSFDLSQYMKLDAAAVRALNLLPNPM 175
Query: 309 DA-NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
D NK+ L GL+N+ C G+RL+ W+KQPL+D N+I RL+IV+AFV+DT LRQ L
Sbjct: 176 DGGNKSMCLTGLLNK-CKTPQGQRLVAQWIKQPLMDKNKIEERLNIVEAFVEDTELRQTL 234
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
+ +K+ D RL ++++A LQ V++YQS RL L++Y G L+ E +
Sbjct: 235 QDEMKKFPDFSRLAKKFQRQKATLQDCVRVYQSVQRLEPFADVLERYHGDHRKLLVECFR 294
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
DPL L D KF LVET++DL+Q+EN EY+I +++D GL + + + +
Sbjct: 295 DPLMELVAD--FAKFCDLVETTIDLEQVENHEYLIKATFDEGLQECREHMDEILEKFPVE 352
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
+ DL L K +KL+ Q G+ FRIT+KEE +R ++ +ETRKDGV+FTN
Sbjct: 353 LNKAGRDLSLEPSKTIKLESNNQLGYFFRITRKEEKVLRN--NKRYSTIETRKDGVRFTN 410
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+ L +L D+++ + Y + Q +L V++ A +SE + L+ +++++D L+SFA +++
Sbjct: 411 SALSQLNDEFRGYKDTYNDVQGKLAAEVLKIAGGYSEPMQGLSDVIAQIDALVSFAHVSA 470
Query: 608 SCPTPYTRPDINPPDV-GDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNM 666
+ P PY RP I P GDIIL GSRHPC+E QD V FI ND L R K F IITGPNM
Sbjct: 471 NAPIPYVRPTITPKGSEGDIILTGSRHPCLEIQDNVAFIANDVTLSRDKQMFLIITGPNM 530
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GGKST+IRQ+GV +LMAQ+G FVPC A IS+ DCI ARVG+GD QL+GVSTFM EMLET
Sbjct: 531 GGKSTYIRQIGVIVLMAQLGCFVPCSTAQISITDCILARVGSGDSQLKGVSTFMSEMLET 590
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
ASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I++ LFATHFHELT+LA
Sbjct: 591 ASILRTATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATQIKSFCLFATHFHELTSLAD 650
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
E + V N HV+A +T LT+LYKV+PG CDQSFGIHVAE A+FP V+
Sbjct: 651 EVST---------VTNLHVTAL--TTGGTLTLLYKVKPGVCDQSFGIHVAELAHFPSDVI 699
Query: 847 TLAREKAAELEDFTPSAVI----SDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
A++KAAELEDF S+ D+ E +KR+R++ G FL++ +
Sbjct: 700 EFAKQKAAELEDFQGSSAELGQGVTDSTGESQAKRRRLAK----QEGEVIIKDFLQKVNQ 755
Query: 903 MPLETMDLKEALERVKRMKDDLEK 926
+ LETM ++ E V+++K +++
Sbjct: 756 LQLETMTDEQIYEEVQKLKQGVQE 779
>gi|443702178|gb|ELU00339.1| hypothetical protein CAPTEDRAFT_184281 [Capitella teleta]
Length = 848
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/858 (42%), Positives = 553/858 (64%), Gaps = 39/858 (4%)
Query: 85 FETIARDLLLERTDHTLELY---EGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVI 141
FE+ RDLLL R + +E++ G+ W L G+PGNL +ED+LF NN+M + +
Sbjct: 3 FESTVRDLLLVR-QYRVEVFCNKANRGNAWELAYKGSPGNLTQFEDILFGNNDMASSVGV 61
Query: 142 VALFPNFREN-GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAV 200
+A+ E+ T+G+GY D T R LG+ EF D+ F+N+E+ +V LG KECLLP
Sbjct: 62 IAIKLTTAESVKVTLGVGYADATLRKLGVCEFADNDQFSNLEALIVQLGPKECLLPA-GD 120
Query: 201 KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI---- 256
S E K ++ + R GV++T+RK+ EF ++D +QDL+RL++ E ++ + E+
Sbjct: 121 SSPEMKKIQQVVERSGVLVTDRKRAEFSSKDSIQDLNRLLKFKKEEQQNSAALPELEKTH 180
Query: 257 APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA-NKNFS 315
A ++ AL+ Y +LL+DES++ Y + + L Y++LDSAA+RALN++ S T+ N S
Sbjct: 181 AVSSVAALIKYLDLLADESSFNQYTLSSFDLSQYVKLDSAAVRALNLMPSPTEGGNSCQS 240
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRI 374
+ GL+N+ C G+RLL WLKQPL+DVN+I RL++VQ F+DD LR + + LKRI
Sbjct: 241 VLGLLNK-CRTAQGQRLLAQWLKQPLVDVNKIEERLNVVQVFMDDLELRHAIAEDQLKRI 299
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
D +RL ++++A LQ ++YQS +LP + ++++EG L+ E + +PL+ L
Sbjct: 300 PDYQRLSKKFQRKKATLQDCYRVYQSIDKLPLLVEIVERHEGNHKHLLMELFTNPLKELL 359
Query: 435 DDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
D +KF ++E ++D++Q+EN E+M+ +D L AL+N+ + LE +I S A D
Sbjct: 360 MD--FSKFQEMIEQTMDMEQVENHEFMVKPDFDDQLQALRNKLDELEHEIKSQLGVAAKD 417
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIR--KKLTTQFIVLETRKDGVKFTNTKLKK 552
L++ +K LKL+ Q G+ FR+T+K+E +R KK TT ++T+ +GV+F ++ L++
Sbjct: 418 LNMDPNKTLKLESNAQLGYFFRVTRKDEKNLRNNKKYTT----IDTKTNGVRFRSSPLRQ 473
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
L D+Y V +Y QK ++ +I A + E + +++ LDVL++FA ++++ P
Sbjct: 474 LNDEYLGVKADYMEQQKSVLVEIINIAAGYVEPLSLINDVIAHLDVLVAFAQVSANAPVT 533
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
+ RP ++ G I L+ +RHPC+E QD V FIPND + + ++ F IITGPNMGGKST+
Sbjct: 534 FVRPKLHAKGSGIIHLKEARHPCLEMQDDVAFIPNDAQFEKDQAMFHIITGPNMGGKSTY 593
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
IR VGV +LMAQ+G FVPCD A ++V DCI ARVGAGD QL+GVSTFM EMLETASIL+
Sbjct: 594 IRSVGVIVLMAQIGCFVPCDEAEVTVVDCILARVGAGDSQLKGVSTFMAEMLETASILRS 653
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
++ SLIIIDELGRGTSTYDGFGLAWAI EH+ +I+A LFATHFHELT+LA
Sbjct: 654 SSSDSLIIIDELGRGTSTYDGFGLAWAISEHIATQIKAFCLFATHFHELTSLA------- 706
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+ V N HV+A +++ LT+LYKV+PG CDQSFGIHVAE A+FP+ V+ A++K
Sbjct: 707 --DVVPTVKNSHVTAL--TSNDTLTLLYKVKPGVCDQSFGIHVAELAHFPKQVIEFAKKK 762
Query: 853 AAELEDFTPSAVISD--DAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDL 910
A+ELED+ ++ + + E K++++ + G FLKE D+ +T D
Sbjct: 763 ASELEDYQNVSLQGSELEGQDEPAVKKRKVVRED----GEQLIESFLKEVKDLASQTKDA 818
Query: 911 KEALERVKRMKDD-LEKD 927
E ++++K +EKD
Sbjct: 819 NELYAGIQKLKSQVMEKD 836
>gi|409047069|gb|EKM56548.1| hypothetical protein PHACADRAFT_207767 [Phanerochaete carnosa
HHB-10118-sp]
Length = 988
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/931 (40%), Positives = 562/931 (60%), Gaps = 74/931 (7%)
Query: 20 GFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGS-DAL 75
GF SF+K LP +T +R F+R DYY+ HG +A +IA YHT T ++ LG G + L
Sbjct: 27 GFCSFFKKLPAKSPETGTIRLFNRGDYYSVHGPDALYIATHVYHTNTVVKYLGPGGRNGL 86
Query: 76 SSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNWRLVKSGTPGNLGSYEDVL 129
SV++S+N + R+ L R +E++ G G + + L K +PGNL E++L
Sbjct: 87 PSVTLSENSAKMFLREALTAR-QLKVEIWVPEAGQGKRATKFTLDKEASPGNLQDVEEML 145
Query: 130 FANNEMQDTPVIVAL---------FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
F N ++ P+++A+ +G+ + D + R LG+A+F+D+ F+N
Sbjct: 146 FGNVDITTAPIVMAIRVASTPAAPGAPANAKTKQVGVAFADTSTRELGVADFVDNDLFSN 205
Query: 181 VESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
E+ ++ L KE +LPT + + K LR L RC V++TERK +EF +R++ D
Sbjct: 206 TETLIIQLAVKEAILPTGTQSGATERDVDLKKLRAVLERCNVVITERKPSEFNSRNIQDD 265
Query: 236 LDRLVRGSVEPVRDL-VSGFEIAP--------GALGALLSYAELLSDESNYGNYYIRKYS 286
L RL+ S P V I P +L AL +Y LLSD +N+G Y IR +
Sbjct: 266 LMRLLSPSSIPSSSTGVDAASIVPQLSLPAAPASLAALTTYLSLLSDPTNHGAYTIRTHD 325
Query: 287 LDSYMRLDSAAMRALNVLESKTD--ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
L +MRLD++A+RALN++++ + ANKN +L GL+N+ C G RLL WLKQPL+++
Sbjct: 326 LTQFMRLDASALRALNLIDAPGNVGANKNATLLGLLNK-CKTAQGSRLLASWLKQPLVNL 384
Query: 345 NEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+EI R ++V FV D R+ L++ LK + D+ R+ +K A L+ +V++YQ+ ++
Sbjct: 385 HEIRNRQNLVDVFVQDPNSRRLLQEEQLKMLPDMHRICKKFQKSVATLEDVVRVYQAVLK 444
Query: 404 LPYIRSALQQYE--GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
L + ++ + ++ LI E YL L+ + L+K+ +V+ ++DLD+LEN ++
Sbjct: 445 LEGLVKNIESIDTTDEYKVLIDETYLTKLKEF--EVSLSKYSDMVQDTLDLDELENHNFV 502
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
+ YD L L + + + ++ + H++ A++L+L +DK L L+ +G+ FRI+K +
Sbjct: 503 VKPEYDPYLEELAQKLKGVRDELDAEHRRIAAELELDLDKKLHLENSVNWGYCFRISKLD 562
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
KI K + L T+K G+ FT + L++L ++Y++ + +YK Q +LV ++ A T
Sbjct: 563 SKKIEKN-RRAYHELGTQKSGMFFTTSPLRELAEEYRETVAKYKAKQSKLVGEIVAIAAT 621
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
++ I + +++ LDV++SFA +A + P PYT+P++ G ++L+ +RHPC+E QD
Sbjct: 622 YTPILEQWNGVIAHLDVIISFAHVAVNAPEPYTKPEVLERGTGGMVLKDARHPCLEVQDD 681
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
V+FIPND ++I+ +S FQIITGPNMGGKST+IRQVGV L+AQ GS+VPC A + V D
Sbjct: 682 VSFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIALLAQTGSWVPCSEARLPVFDS 741
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
+ RVGAGD QLRGVSTFM EMLETA+IL+ AT SLIIIDELGRGTSTYDGFGLAWAI
Sbjct: 742 VLCRVGAGDSQLRGVSTFMAEMLETANILRSATQDSLIIIDELGRGTSTYDGFGLAWAIS 801
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST--------- 812
EH+ I A LFATHFHELT LA +Q+ V N HV AH+ S
Sbjct: 802 EHIASTIHAFCLFATHFHELTTLA---------QQLPHVKNLHVVAHVSSADGAEDEGVA 852
Query: 813 -SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKI 871
+ +T+LYKV PG CDQSFGIHVAE ANFPE VV LA+ KA ELEDF D +
Sbjct: 853 QKKDMTLLYKVAPGVCDQSFGIHVAELANFPERVVRLAKRKADELEDFNA----EDRMQT 908
Query: 872 EVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
E+ DP+ + G A + LK +SD
Sbjct: 909 EL--------DPSVVEDGTALVEELLKAWSD 931
>gi|328851311|gb|EGG00467.1| hypothetical protein MELLADRAFT_118031 [Melampsora larici-populina
98AG31]
Length = 963
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/910 (41%), Positives = 544/910 (59%), Gaps = 55/910 (6%)
Query: 7 KLPELKLDAKQARGFLSFYKTLPNDTRA-VRFFDRR--DYYTAHGENATFIAKTYYHTTT 63
K PE D +R F+ F++ L T+ +R F+R D+YT +G++A ++A +Y T T
Sbjct: 8 KAPETNEDQTTSRKFIEFFRKLEPATKGTLRVFEREKGDFYTCYGDDAHYVATNFYRTNT 67
Query: 64 ALRQLGT---GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEG-----SGSNWRLVK 115
LR +G S+AL++ S++KN T R+ L R +++Y + +W L
Sbjct: 68 VLRYIGGQSGSSNALAACSLNKNAAITFLRECLTSR-QLRIQIYRSETPSKNSISWSLAL 126
Query: 116 SGTPGNLGSYEDVLFANNEMQDTPVIVALF---PNFRENGCTIGLGYVDLTKRVLGLAEF 172
+PGNL D+LF+N ++ +PVI +L+ + + G T+G+ + D++ R +GL+EF
Sbjct: 127 QASPGNLEPLTDLLFSNTDLLSSPVIASLWIKGSSTTQAGRTVGVAFADMSIRTIGLSEF 186
Query: 173 LD-DSHFTNVESALVALGCKECLLPTEAVKSS----ECKTLRDALTRCGVMLTERKKTEF 227
+ D + N ES ++ LG KE +LPT S E +RD L RCGV++TER + EF
Sbjct: 187 PEKDDGWANTESLVIQLGIKEAILPTTTTGKSGDTGEYGQVRDMLERCGVVVTERPRAEF 246
Query: 228 KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSL 287
+ + QD++RL+ G + + A AL LL+Y +L D SN+ + + L
Sbjct: 247 NIKSIEQDVNRLLEGERQLAALPQFDMKTALAALNPLLNYLSILDDPSNHSTFKFVTHDL 306
Query: 288 DSYMRLDSAAMRALNVLESKTD---ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
YMRLD++A+RAL++ + T K+ SLFG++NR C G RLL WLKQPL+++
Sbjct: 307 GQYMRLDASAVRALHLFPNPTGIGGGGKSMSLFGMLNR-CKTSQGTRLLGRWLKQPLVNL 365
Query: 345 NEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+EI R +V D LRQ L++ HLK + D+ R+ + A L+ +V++YQ+ I
Sbjct: 366 HEIEQRQMLVNILFHDGLLRQQLQEDHLKAMPDLTRISKRFTQGAASLEDVVRVYQAIII 425
Query: 404 LPYIRSALQQYEGQFSS-------LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE 456
LP I AL++ EG + L+ E Y PLE D L +++ +VET+VDL++L
Sbjct: 426 LPDILKALEKAEGPTDTDCAAEKRLMNEIYCVPLEECITD--LAQYVEMVETTVDLEELS 483
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD-KALKLDKGTQFGHVF 515
N ++I +D L LK E Q+ H + A DL + +D K L + +G+VF
Sbjct: 484 NHRFIIKPEFDDELRELKTGLEQNRDQLDEEHNRVADDLGMGMDSKTLHFENHQVYGYVF 543
Query: 516 RITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
R+T+KE IR K +I L R +G FT LK+L + +++ ++Y+ Q LV V
Sbjct: 544 RLTRKESGAIRAK--KNYIELSNRNNGCHFTTKLLKELNNDLKELTQKYQKKQNSLVKEV 601
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
++ A ++ I + L +++ LD+++SFA ++ P YTRP + P GD+ L+ RHPC
Sbjct: 602 VKIAASYCPILEKLNEIIAHLDLIVSFAHVSLHAPITYTRPKVFPLGEGDVSLKECRHPC 661
Query: 636 VEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
+E Q+ +NFIPND + R +S F IITGPNMGGKST+IRQ+GV LMAQ+G +VPC AS
Sbjct: 662 LEVQEDINFIPNDTIMERNQSSFHIITGPNMGGKSTYIRQIGVVALMAQLGCYVPCSEAS 721
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
+ + D I ARVGAGD Q +G+STFM EMLETA ILK AT SLIIIDELGRGTSTYDGFG
Sbjct: 722 LPIFDSILARVGAGDSQTKGISTFMAEMLETAVILKSATKNSLIIIDELGRGTSTYDGFG 781
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
LAWAI EH+ EI A TLFATHFHELT+L +Q+ V NYHV AH++++ K
Sbjct: 782 LAWAISEHIAVEIGAFTLFATHFHELTSL---------DQQVEHVKNYHVVAHVETSKTK 832
Query: 816 -----LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD--- 867
+T+LYKVE G DQSFGIHVAE + FPE V+ LAR KA ELE F V +
Sbjct: 833 ESIQEITLLYKVEKGFSDQSFGIHVAEMSEFPEEVLKLARRKAEELEQFDKKTVTKETSI 892
Query: 868 -DAKIEVGSK 876
+ +IE G +
Sbjct: 893 KEEEIESGVR 902
>gi|380027167|ref|XP_003697302.1| PREDICTED: DNA mismatch repair protein Msh2-like [Apis florea]
Length = 919
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/886 (41%), Positives = 533/886 (60%), Gaps = 42/886 (4%)
Query: 10 ELKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+ +D + F+ F+K+LP VRFF+R DYYT HG +A F A+ + TT+ + +
Sbjct: 8 QFNMDPSSQQSFVRFFKSLPEKLNTTVRFFNRSDYYTLHGNDALFAAQEIFKTTSVCKMI 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGS 124
G V ++KN FE+ RDLLL + + +E+Y G+ NW L G+PGNL
Sbjct: 68 GADPYKTEGVILNKNHFESFIRDLLLVK-QYRVEVYINQGTAKNQNWILEYKGSPGNLTQ 126
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+ED+LF +N++ + ++A+ +GL VD T + + EF D+ F+N+ES
Sbjct: 127 FEDILFGSNDIAVSVRVIAVKLGMEGKFRIVGLSCVDTTATLFSVCEFQDNESFSNLESL 186
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--- 241
+V L KECLL + S E +TL+ + R VM+T RKK EF + ++QDL+ L+R
Sbjct: 187 IVTLAPKECLL-IQGEGSYEFQTLKQLIERNNVMVTTRKKNEFSSESVIQDLNTLIRFKK 245
Query: 242 GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
G + V+ L A A AL+ Y +L SDE N + I + +++LDSAA++A
Sbjct: 246 GQQQNVQSLPEVNLTFAMSATSALIKYLDLTSDEGNLNQFSIDQIKQSRFLKLDSAAIKA 305
Query: 301 LNVLESKTD-----ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQ 355
LN+ E + D N S+ L+++ C G RLL W++QPL D++ I R DIV+
Sbjct: 306 LNI-EPRVDTSVLNGNAPTSILNLLDK-CRTPQGHRLLAQWIRQPLKDLSLIKERHDIVE 363
Query: 356 AFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
A V+D LR +L + HL+RI D++ L L +++A LQ K+Y LP + L+Q+
Sbjct: 364 ALVNDNELRSNLNEDHLRRIPDLQVLAKKLARKKATLQDCYKIYTCISHLPIL---LEQF 420
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+K + DPL D +NKF +VE ++DLD E G++++ S +D L LK
Sbjct: 421 PKINIIALKTMFTDPLNEFIKD--MNKFQQMVEQTIDLDSAEKGDFLVRSEFDDELKELK 478
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ +E ++ + + A DL + K LKL+ QFG+ FR+T KEE +R K Q+I
Sbjct: 479 CTMDEIEIKLQAQLNKVADDLSIEAGKILKLESNQQFGYYFRVTLKEEKVLRNK--KQYI 536
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
+L++ K GV+F + KL L D+Y + ++Y QK++V +I+ A +S K++ +L+
Sbjct: 537 ILDSNKSGVRFRSNKLNDLNDEYIAIRDKYIMEQKKVVAEIIEIAAGYSNTIKAIGNVLA 596
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDVL +FA A PY RP++ P + G+ L RHPC+E Q+ V++I N+ R
Sbjct: 597 SLDVLTAFASAAVCANKPYVRPEMLPSEKGEFNLIQVRHPCLEVQEGVDYIANNINFKR- 655
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
+ F IITGPNMGGKST+IR GV+ LMA +GSFVPCD+A IS+ DCI ARVGA DCQL+
Sbjct: 656 ECHFCIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDCQLK 715
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
G+STFM EM+ETA+ILK AT SL++IDELGRGTSTY+G G+AW+I E+L +EI+ LF
Sbjct: 716 GLSTFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLF 775
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATHFHE+T L E + V N HV+A +D KLT+LYK++PG CDQSFGIH
Sbjct: 776 ATHFHEITKLEEE---------ISTVKNQHVTALVDDN--KLTLLYKIKPGICDQSFGIH 824
Query: 835 VAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRI 880
VA+ ANFP+ ++ A+ K AELED+ S D +K+KRI
Sbjct: 825 VAKMANFPQDIIEFAKRKQAELEDYQDSLFEGSDNP----TKKKRI 866
>gi|398396998|ref|XP_003851957.1| hypothetical protein MYCGRDRAFT_72798 [Zymoseptoria tritici IPO323]
gi|339471837|gb|EGP86933.1| hypothetical protein MYCGRDRAFT_72798 [Zymoseptoria tritici IPO323]
Length = 936
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/881 (41%), Positives = 533/881 (60%), Gaps = 53/881 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPND--TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D + GF+ + L D T +R FDR D+ +AHG++A FIA+ Y TT+ L+
Sbjct: 5 PELKVDDET--GFVKAFHQLEADKPTDTIRIFDRGDFLSAHGDDADFIARVQYKTTSVLK 62
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-WRLVKSGTPGNLGSY 125
LG L SV+++ ++ T RD + R +E+ + SG N W++ K +PGNL
Sbjct: 63 TLGRNP-GLPSVTMTVTVYRTFLRDAIF-RLGKRVEVLQTSGRNAWKVAKQASPGNLQDI 120
Query: 126 EDVLFANNEMQDTPVIVALFPNFREN-GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
E+ L ++ P+I+A+ + + N G +G+ + D + R LG++EF+D+ ++N ES
Sbjct: 121 EEDL--GGHVESAPIILAVKVSSKANEGRNVGVCFADASVRELGVSEFVDNDVYSNFESL 178
Query: 185 LVALGCKECLLPTEAVKS-SECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
++ LG KECL+ ++ K +E LR C ++ER +F RD+ QDL RL+R
Sbjct: 179 IIQLGVKECLIQIDSTKKDAELSKLRTIADNCNCAVSERPSGDFANRDIEQDLTRLLRSE 238
Query: 244 VE----PVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
P DL ++A + AL+ Y ++SD SN+G Y + ++ L YM+LDS+A++
Sbjct: 239 TSSGTLPQMDL----KVAMSSAAALIKYLGIMSDPSNFGEYKLYQHDLTQYMKLDSSALK 294
Query: 300 ALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVD 359
ALN++ D +K +L+GL+N C +G RLL WLKQPL+ + +I R +V+AFV+
Sbjct: 295 ALNLMPGPRDGSKTMNLYGLLNH-CKTPVGSRLLAQWLKQPLMSLEDIEKRQTLVEAFVN 353
Query: 360 DTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEGQ 417
DT LRQ L++ H++ I D+ RL ++++A LQ +V+ YQ +IRLP +I + +
Sbjct: 354 DTQLRQTLQETHMRSIPDLYRLAKKFQRKKADLQDVVRTYQVAIRLPGFIEAFENAADES 413
Query: 418 FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
+ Y D L + +K + +VE++VDLD ++N EY+I +D L ++ +
Sbjct: 414 CKPALDSEYADKLRDYSGS--FDKLVEMVESTVDLDAIDNHEYIIKPEFDDTLRIIRRKL 471
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
+S++ I+ H + DL L +K L L+ G R+T+ E IR K + L
Sbjct: 472 DSVQYNINKEHSRVGDDLSLDTEKKLLLENHRIHGWCLRLTRNEASVIRNK--KSYTELA 529
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K+G FT + L L +++++ E Y Q LV V+ A ++ + + LA +L+ LD
Sbjct: 530 TQKNGTYFTTSTLSDLRREFEQLNENYTRTQTGLVAEVVNVAASYCPVIEKLAAVLAHLD 589
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
V +SFA ++ P YTRP I+P G +L+ +RHPC+E QD V+FIPND + R S
Sbjct: 590 VCVSFAHVSVHAPIAYTRPKIHPRGTGSTVLKEARHPCLEMQDDVSFIPNDVSMTREDSS 649
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC-DRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNMGGKST+IRQ+GV LMAQVG FVPC + A +++ DCI ARVGA D QL+GV
Sbjct: 650 FLLITGPNMGGKSTYIRQIGVIALMAQVGCFVPCAEGAELTLFDCILARVGASDSQLKGV 709
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLETA+ILK AT SL+IIDELGRGTSTYDGFGLAWAI EH+++EI + T+FAT
Sbjct: 710 STFMAEMLETANILKTATRESLVIIDELGRGTSTYDGFGLAWAISEHIIKEIGSFTMFAT 769
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHI-DSTSR----------------KLTML 819
HFHELTAL E V N HV AHI DS + ++T+L
Sbjct: 770 HFHELTALKDEYPQ---------VQNLHVVAHIGDSPAESNGDVAMGGTGAGRGGEVTLL 820
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
YKV PG DQSFGIHVAE FP V+ +A+ KA ELEDF+
Sbjct: 821 YKVVPGISDQSFGIHVAELVRFPRKVIDMAKRKADELEDFS 861
>gi|328792194|ref|XP_001121207.2| PREDICTED: DNA mismatch repair protein Msh2 [Apis mellifera]
Length = 920
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/909 (40%), Positives = 533/909 (58%), Gaps = 52/909 (5%)
Query: 10 ELKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+ +D + F+ F+K LP VRFF+R DYYT HG +A F A+ + TT+ + +
Sbjct: 8 QFNMDPSSQQSFVRFFKNLPEKLNTTVRFFNRSDYYTLHGNDALFAAQEIFKTTSVCKMI 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGS 124
G V ++KN FE+ RDLLL + + +E+Y G+ NW L G+PGNL
Sbjct: 68 GADPYKTEGVILNKNHFESFIRDLLLVK-QYRVEVYINQGTAKNQNWILEYKGSPGNLTQ 126
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+ED+LF NN++ + ++A+ +GL VD T + + EF D+ F+N+ES
Sbjct: 127 FEDILFGNNDIAVSVRVIAVKLGIEGKFRIVGLSCVDTTATLFSVCEFQDNESFSNLESL 186
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--- 241
+V L KECLL + S E +TL+ + R VM+T RKK EF + ++QDL+ L+R
Sbjct: 187 IVTLAPKECLL-IQGEGSYEFQTLKQLIERNNVMITTRKKNEFSSESVIQDLNTLIRFKK 245
Query: 242 GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
G + V+ L A A AL+ Y +L SDE N + I + Y++LDSAA++A
Sbjct: 246 GQQQNVQSLPEVNLTFAMSATSALIKYLDLTSDEGNLNQFSIDQIKQSRYLKLDSAAIKA 305
Query: 301 LNVLESKTD------ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
LN+ E + D N S+ L+++ C G RLL W++QPL D++ I R DIV
Sbjct: 306 LNI-EPRIDTSCVLNGNAPTSILNLLDK-CRTPQGHRLLAQWIRQPLKDLSLIKERHDIV 363
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+ V+D LR +L + HL+RI D++ L L +++A LQ K+Y LP + L+Q
Sbjct: 364 EVLVNDNELRSNLNEDHLRRIPDLQVLAKKLARKKATLQDCYKIYTCMSHLPIL---LEQ 420
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+ +K + DPL D ++KF +VE ++DLD E G++++ +D L L
Sbjct: 421 FLKINIIALKTMFTDPLSEFIKD--MDKFQQMVEQTIDLDSAEKGDFLVRPEFDDELKEL 478
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
K + +E ++ + + A DL + K LKL+ QFG+ FR+T KEE +R K Q+
Sbjct: 479 KCTMDEIEIKLQAQLNKVADDLSIEAGKILKLESNQQFGYYFRVTLKEEKVLRNK--KQY 536
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
I+L++ K GV+F + KL L D+Y + ++Y QK++V +I+ A +S K++ +L
Sbjct: 537 IILDSNKSGVRFRSNKLNDLNDEYIGIRDKYIMEQKKVVAEIIEIAAGYSNTIKAIGNVL 596
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
+ +DVL +FA A PY RP++ P + G+ L RHPC+E Q+ V++I ND R
Sbjct: 597 ASIDVLTAFASAAICANKPYVRPEMLPSEKGEFNLIQVRHPCLEVQEGVDYIANDINFKR 656
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
+ F IITGPNMGGKST+IR GV LMA +GSFVPCD+A IS+ DCI ARVGA DCQL
Sbjct: 657 -ECHFCIITGPNMGGKSTYIRSAGVTALMAHIGSFVPCDQARISLLDCILARVGADDCQL 715
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EM+ETA+ILK AT SL++IDELGRGTSTY+G G+AW+I E+L +EI+ L
Sbjct: 716 KGLSTFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCL 775
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHE+T L E + V N HV+A +D+ KLT+LYK++PG CDQSFGI
Sbjct: 776 FATHFHEITKLEEE---------ISTVKNQHVTALVDNN--KLTLLYKIKPGICDQSFGI 824
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
HVA+ ANFP+ V+ A+ K AELED+ S D +P + A
Sbjct: 825 HVAKMANFPQDVIEFAKRKQAELEDYQDSLFEGSD-------------NPQKKRKIIQEA 871
Query: 894 HQFLKEFSD 902
F+ EF D
Sbjct: 872 EIFIAEFID 880
>gi|440794810|gb|ELR15959.1| DNA mismatch repair protein msh2, putative [Acanthamoeba
castellanii str. Neff]
Length = 935
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/934 (39%), Positives = 547/934 (58%), Gaps = 57/934 (6%)
Query: 15 AKQARGFLSFY-KTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD 73
+K F FY +T P + VRFF +++ ++ HGE A F+A+ Y+ T A+ +GS
Sbjct: 17 SKAEDAFCRFYNQTFPKEDGVVRFFGQKEIFSVHGEAAKFVAQEYFRTLAAV--TFSGSQ 74
Query: 74 ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANN 133
L +V + + +E + RDL+L + +E++ +G+NW K +PGN+ +E++L+ N
Sbjct: 75 QLPTVEMKQEKYEDVVRDLILVKL-KKVEVWGKTGTNWAKEKKASPGNVRDFEELLYRNK 133
Query: 134 EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKEC 193
E++DT V VA+ +G + D R +G +F+D H N+ES L+ +G +EC
Sbjct: 134 ELEDTAVSVAICFGVEGQHKMVGAAFADAILRKIGYCQFVDTIHLANLESLLLQIGAREC 193
Query: 194 LL-PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS 252
+L P E K L L RCG+M TE KK FK +D+ QDL RLVR + +L
Sbjct: 194 ILAPGGTRDEIEMKKLDGLLERCGIMKTEVKKAHFKAQDIEQDLSRLVREDM--ANNLHQ 251
Query: 253 GFE--IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
E A +L A++ + ELLSDE N+ +Y ++ L YMR+D A RALN+ S TD
Sbjct: 252 ALEHSCAMSSLAAIIKHMELLSDEDNFRSYQLKTLDLSKYMRIDQPASRALNLFPSPTDT 311
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+K+FSL+GL+N+ C MG R L W+KQPLL++++I R +IV+ FV+D LRQ +++H
Sbjct: 312 DKSFSLYGLLNK-CRTAMGSRRLLQWIKQPLLNIDDIEVRQNIVEIFVEDAELRQSMQEH 370
Query: 371 LKRISDIERLMHNLEKRR--AGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLD 428
+RI+DI+RL+ ++ R A L+ V LY RLP + + L Y + + L+ E+Y D
Sbjct: 371 FRRITDIDRLIKKFQRTRITASLKDCVVLYDIYRRLPSMHATLSAYSTKNAGLLHEQYTD 430
Query: 429 PLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
L + D+ + F L+E +DLD +N EY I++ +D + E+E ++++I ++
Sbjct: 431 ELARVIDE--FSDFQRLIEGCIDLDAAQNNEYQINARFDPEFTQWCKEKEQVKQKIDTIF 488
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI---RKKLTTQFIVLETRKDGVKF 545
+ V + L DK + +K E I +K TT+ I ++++D
Sbjct: 489 R--------AVQRELGADKRDKDSVELENSKVHEWHIVVPKKASTTKLI--KSKRDWSVL 538
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
+T ++ ++ E + QKELV +I+ ++ + + L+ +L++LDV +S A +
Sbjct: 539 EDTTKAMRSRRWTELEECIQAKQKELVLEIIKCVASYVPLVEDLSILLADLDVFVSLAHV 598
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPN 665
A + P Y RP + P GD+IL+ +RHPC+E QD V FI ND + R S FQIITGPN
Sbjct: 599 AVNAPAGYVRPRLTPSGTGDVILKQARHPCLELQDGVGFIANDVIMKRDDSSFQIITGPN 658
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
MGGKST+IR GV +LMAQ+GSFVPC A +SV DCI R+GA D QLRGVSTFM EM E
Sbjct: 659 MGGKSTYIRSAGVIVLMAQIGSFVPCSTAVVSVVDCIMCRLGASDSQLRGVSTFMAEMQE 718
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
T+SILK AT RSLIIIDELGRGTSTYDGFGLAWAI EH++ +I FATHFHELTAL
Sbjct: 719 TSSILKAATQRSLIIIDELGRGTSTYDGFGLAWAISEHIINKIGCFCFFATHFHELTAL- 777
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
+ + V N HV+A + KL +LY ++ G D+SFGIH+AE A FP SV
Sbjct: 778 --------EQHIPKVKNLHVTAQ--TADNKLVLLYNIKQGPSDKSFGIHIAELAGFPPSV 827
Query: 846 VTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR-ISDPNDMSRGAAR------------ 892
+ +A++K LE S ++ VG KR+R S P + A +
Sbjct: 828 IEVAQQKVETLEKTAQSKGVTSG----VGQKRERPTSKPGAGAASAVKRPRTEGAEEEGT 883
Query: 893 --AHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
QFL +F +PL+++ EA++R+K M++ L
Sbjct: 884 RLVRQFLDDFKKLPLDSLSPAEAMQRMKGMRERL 917
>gi|405118126|gb|AFR92901.1| DNA mismatch repair protein MSH2 [Cryptococcus neoformans var.
grubii H99]
Length = 954
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/867 (42%), Positives = 541/867 (62%), Gaps = 65/867 (7%)
Query: 35 VRFFDR--RDYYTAHGENATFIAKTYYHTTTALRQLGTG----------SDALSSVSVSK 82
VRF +R DYY+AHG +A FIA Y TT L+ LG+G + L SV++S
Sbjct: 28 VRFVERMPTDYYSAHGADAIFIANEVYRTTNVLKYLGSGSKPSSSSGSYARGLPSVTISM 87
Query: 83 NMFETIARDLLLERTDHTLELYEGSG----------SNWRLVKSGTPGNLGSYEDVLFAN 132
+ + R+ L + +E+Y +G S W + K+ +PGNL ED+LF++
Sbjct: 88 ALTKAFLREALTTK-QMRIEIYAPTGGVAPGSRKDHSKWEISKTASPGNLSQVEDLLFSD 146
Query: 133 NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE 192
++ V +A+ ++ T+G+G+VD+ ++V+G++EF+DD +F+N ES L+ LG KE
Sbjct: 147 KDLTANAVSMAIRVVVKDGVNTVGVGFVDVQEKVVGVSEFVDDENFSNTESLLIQLGVKE 206
Query: 193 CLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV----RGSVEPVR 248
C+L + K E LR + CGV++T+RK +EF+T+++ QDL+RL+ G+ P
Sbjct: 207 CVLQADE-KRPELAKLRMLVEWCGVIVTDRKSSEFQTKNVEQDLNRLLDESHAGAALPEF 265
Query: 249 DLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT 308
DL +IA AL AL++Y LLSD S +G + ++ L YM+LD++A++ALN++ +
Sbjct: 266 DL----KIAMSALSALINYLSLLSDLSLHGQLRLHRHDLSQYMKLDASALKALNLMPNPQ 321
Query: 309 D--ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQD 366
+ N+N S++GL+NR C G RLL WLKQPL++ +EI R +V+ FV+D+ RQ
Sbjct: 322 ELGGNRNMSIYGLLNR-CKTSQGTRLLGRWLKQPLVNRHEIIQRQTMVEVFVEDSVNRQS 380
Query: 367 LR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY---EGQFSSLI 422
++ ++LK++ D R+ KR AGL+ +V++YQ+ LP ++ L+ E LI
Sbjct: 381 IQTKYLKQMPDFHRISKKFHKRVAGLEDVVRVYQAVQLLPGLQEILENANTPELGARDLI 440
Query: 423 KERYLDPLESLTDDDHLNKFI---ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQES 479
+E +L PL +H+ K + ++VE ++DLD+L N Y+I + D L + E +
Sbjct: 441 EEIWLKPLR-----EHIEKLVNYSSMVEDTIDLDELANHNYVILPTIDEDLQRFREELLN 495
Query: 480 LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR 539
+ Q+ H++ +DL L +DK L L+ + + FRITK E IR K ++I L T+
Sbjct: 496 VRDQLDDEHRRVGNDLGLDIDKKLHLENHQVYKYSFRITKAEASLIRNK--KEYIDLATQ 553
Query: 540 KDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVL 599
K G FT LK L ++Y ++ E Y+ Q+ LV V+ A +++ + + L +++ +DV+
Sbjct: 554 KSGTIFTTKTLKALSEEYFRLQELYEKQQRHLVKEVVSIASSYTPVLEMLDNLIAAVDVI 613
Query: 600 LSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQ 659
+S A ++S P PY +P + GD+++ G+RHPC+E QD + FIPND ++ +G S F
Sbjct: 614 VSMAHVSSEAPIPYVKPILTEKGTGDVVVLGARHPCLEVQDDIVFIPNDHEMRKGDSEFI 673
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
I+TGPNMGGKST+IRQ+GV LMAQVG FVP A + + DCI ARVGAGD QL+GVSTF
Sbjct: 674 ILTGPNMGGKSTYIRQIGVIALMAQVGCFVPATEARLPIFDCILARVGAGDNQLKGVSTF 733
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M EMLETA+IL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ E+I LFATHFH
Sbjct: 734 MAEMLETATILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIAEKIHCFCLFATHFH 793
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHID-------STSRKLTMLYKVEPGACDQSFG 832
ELT L+ +N + V N HV A + R +T+LY+V+ G CDQSFG
Sbjct: 794 ELTTLSEKNPH---------VKNLHVEALVKDKDGEGGGKERDITLLYQVKEGICDQSFG 844
Query: 833 IHVAEFANFPESVVTLAREKAAELEDF 859
IHVAE ANFPESVV LA+ KA ELEDF
Sbjct: 845 IHVAELANFPESVVKLAKRKAEELEDF 871
>gi|452981358|gb|EME81118.1| hypothetical protein MYCFIDRAFT_49240, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 929
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/873 (41%), Positives = 528/873 (60%), Gaps = 41/873 (4%)
Query: 9 PELKLD--AKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK+D A + F K P D+ +R FDR D+ +AHG++A FIA Y TT+ L+
Sbjct: 5 PELKVDDEAGFVKTFYQLEKEKPKDS--IRIFDRGDFLSAHGDDAEFIANVQYKTTSVLK 62
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG-SNWRLVKSGTPGNLGSY 125
LG L SV+++ +F T RD + R +E+ E SG S W++ K +PGNL
Sbjct: 63 TLGRNP-GLPSVTMTVTVFRTFLRDAIF-RLGRRIEVLESSGRSQWKVTKQASPGNLQDI 120
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
ED L ++ P+I+A+ + + N +G+ + D + R LG++EF+D+ ++N E+
Sbjct: 121 EDDL--GGHVESAPIILAVKVSAKPNDARNVGVCFADASVRELGVSEFVDNDIYSNFEAL 178
Query: 185 LVALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
++ LG KECL+ T+ + K +E L+ C ++ER +F RD QDL RL+R
Sbjct: 179 IIQLGVKECLIQTDLSKKDAELHKLKTIADNCNCAVSERPIGDFSARDTEQDLARLLRDE 238
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
+ ++A + AL+ Y ++SD SN+GNY + ++ L YM+LDS+A++ALN+
Sbjct: 239 KATAALPQTDLKLAMASAAALMKYLGIMSDPSNFGNYQLYQHDLTQYMKLDSSALKALNL 298
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
+ +K +LFGL+N C +G RLL WLKQPL+ + EI R +V+AFV+DT L
Sbjct: 299 MPGPRHGSKTMNLFGLLNH-CKTPVGSRLLAQWLKQPLMSLEEIEKRQQLVEAFVNDTEL 357
Query: 364 RQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEGQFSSL 421
RQ L++ HL+ I D+ RL ++++A L+ +V+ YQ +IR+P +I + + + +
Sbjct: 358 RQTLQEEHLRSIPDLYRLAKKFQRKKANLEDVVRAYQVAIRIPDFIGTFEGVMDEAYKNA 417
Query: 422 IKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLE 481
+ E Y + L S +D L K +VET+VDL+ L++ E++I +D L ++ + ++L
Sbjct: 418 LDETYTNKLRSYSDS--LAKLQEMVETTVDLEALDHHEFIIKPEFDDTLRVIRKKLDTLR 475
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
I H++ SDL L +K L L+ G R+T+ E IR K + + T+K+
Sbjct: 476 YNIDKEHERVGSDLGLDTEKKLLLENHRVHGWCLRLTRTEASVIRGK--KHYPEIATQKN 533
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
G FT KL+++ ++ ++ E Y Q LVN V+ A ++ + + LA +L+ LDV++S
Sbjct: 534 GTYFTTRKLQEMRREFDQLSENYNRTQSGLVNEVVNVAASYCPVIEQLAGVLAHLDVIVS 593
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQII 661
FA ++ P Y RP I+P G L+ +RHPC+E QD V FI ND L R S F II
Sbjct: 594 FAHVSVHAPAAYVRPKIHPRGTGSTNLKEARHPCLEMQDDVQFITNDVTLARESSEFLII 653
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKST+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D QL+GVSTFM
Sbjct: 654 TGPNMGGKSTYIRQIGVIALMAQIGCFVPCTEAELTLFDCILARVGASDSQLKGVSTFMA 713
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EMLET++ILK AT SL+IIDELGRGTSTYDGFGLAWAI EH+++EI A +FATHFHEL
Sbjct: 714 EMLETSNILKTATKESLVIIDELGRGTSTYDGFGLAWAISEHIIKEIGAFAMFATHFHEL 773
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTS--------------RKLTMLYKVEPGAC 827
TAL V N HV AHI + R++T+LYKV PG
Sbjct: 774 TALVDTYPQ---------VQNLHVVAHISGEAEDTDMTNNGTSTRRREVTLLYKVIPGIS 824
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
DQSFGIHVAE FP+ VV +A+ KA ELEDF+
Sbjct: 825 DQSFGIHVAELVRFPQKVVNMAKRKADELEDFS 857
>gi|383861845|ref|XP_003706395.1| PREDICTED: DNA mismatch repair protein Msh2-like [Megachile
rotundata]
Length = 920
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/875 (40%), Positives = 523/875 (59%), Gaps = 39/875 (4%)
Query: 10 ELKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+ +D + F+ F+K LP +RFF+R DYYT HG +A F A+ + TT + +
Sbjct: 8 QFNMDPPTQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGSDALFAAQEVFKTTAVCKMI 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGS 124
G V ++KN FE RDLLL + + +E+Y GS NW L +G+PGNL
Sbjct: 68 GADPYKTEGVILNKNHFEAFIRDLLLVK-QYRIEVYVNQGSSKNQNWVLEFTGSPGNLSQ 126
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+EDVLF NN++ + ++A+ +GL VD T + EF D+ F+N+ES
Sbjct: 127 FEDVLFGNNDIAVSVRVIAVKLGMDGKSRVVGLSCVDTTATSFSVCEFQDNESFSNLESL 186
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--- 241
+V L KECLL + S E +TL+ + R VM+T +KK EF + +VQDL+ L++
Sbjct: 187 IVTLAPKECLL-IQGEGSYEFQTLKQLMERNNVMITLKKKNEFSSESVVQDLNTLIKFAK 245
Query: 242 GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
G V+ L A A AL+ Y +L SDE N + + + Y++LD+AA++A
Sbjct: 246 GQQPNVQSLPEINLNFAMSATAALIKYLDLTSDEGNLNQFILDQIEQSRYLKLDAAAIKA 305
Query: 301 LNVLESKTD------ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
LN+ E + D N S+ L+++ C G RLL W++QPL D++ I R DIV
Sbjct: 306 LNI-EPRVDTLSILSGNAPTSILTLLDK-CRTAQGHRLLAQWVRQPLKDLSLIKERHDIV 363
Query: 355 QAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+A V+D LR +L + HL+RI D++ L L +++A LQ K+Y + LP + ++Q
Sbjct: 364 EALVNDNELRSNLSEDHLRRIPDLQVLAKKLARKKATLQDCYKIYMCMLHLPRL---IEQ 420
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+ +K + +PL L D ++K+ +VE ++DLD E G++++ S +D L L
Sbjct: 421 FSNINVVALKTVFSNPLTELIKD--MDKYQQMVEQTIDLDAAEKGDFLVRSEFDEELKEL 478
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
KN + +E+++ + + A DL + K LKL+ QFG+ FR+T KEE +R K Q+
Sbjct: 479 KNTMDEMEKKLQAQLSKVADDLSIDAGKTLKLESNQQFGYYFRVTLKEEKVLRNK--KQY 536
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
+L++ K GV+F + +L L D+Y ++Y QK++V+ +I+ A +S K++ +L
Sbjct: 537 TILDSNKSGVRFRSNRLSDLNDEYIATRDKYTTEQKKVVSEIIEIAAGYSSPVKNIGNIL 596
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
+ LDVL +FA A S PY RP + P + G+ L RHPC+E + +++I ND R
Sbjct: 597 ACLDVLTAFASAAVSANKPYIRPQMLPSEAGEFNLVQVRHPCLENLEGMDYIANDVNFKR 656
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
+ F IITGPNMGGKST+IR GV L+A +GSFVPCD A IS+ DCI ARVGA D QL
Sbjct: 657 -EYHFCIITGPNMGGKSTYIRSAGVTALLAHIGSFVPCDEAKISLLDCILARVGADDSQL 715
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EM+ETA+ILK AT SL++IDELGRGTSTY+G G+AW+I E+L +EI+ L
Sbjct: 716 KGLSTFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCL 775
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHE+T L E + V N HV+A +D KLT+LYKV+PG CDQSFGI
Sbjct: 776 FATHFHEITKLEEE---------VSAVKNQHVTALVDDN--KLTLLYKVKPGICDQSFGI 824
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDD 868
HVA+ ANFP++V+ A+ K AELED+ S D
Sbjct: 825 HVAKMANFPQNVIEFAKRKQAELEDYQHSTFKGSD 859
>gi|388853653|emb|CCF52621.1| probable DNA mismatch repair protein MSH2 [Ustilago hordei]
Length = 957
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/962 (39%), Positives = 564/962 (58%), Gaps = 64/962 (6%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
P+L LD F F+K++P + +R FDR ++Y+AHG++A IA + T +AL+
Sbjct: 15 PDLGLDNAAESSFCQFFKSMPKSSAGTLRLFDRSEFYSAHGDDAILIANLVFKTHSALKY 74
Query: 68 LGTGSD--ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG----SNWRLVKSGTPGN 121
LG+G L S+++S + R+ L R +E+Y +G ++W ++K +PGN
Sbjct: 75 LGSGGKDKGLPSITLSVAATKNFLREALTTR-QMRVEIYGNTGGKRNNSWTVIKQASPGN 133
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L ED++F N ++ +P+++AL R+ T+G + D T R L +AE+ ++ F+N
Sbjct: 134 LQQMEDMIFVNADIVSSPIVMALKMTTRDGVKTVGAAFADATNRELCVAEYAENDLFSNT 193
Query: 182 ESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
ES ++ LG KEC+LP + + + K LR+ + RCGV++ + ++ +F +++ QDL RL+
Sbjct: 194 ESLIIQLGVKECILPKDDKGADLDLKKLREVVNRCGVVMFDNRRADFSGKNIEQDLRRLL 253
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
R G P DL ++A GA AL+SY LL+DE N+G Y I + L Y+RLD++
Sbjct: 254 REEAAGITVPELDL----KVAMGAASALISYLALLTDELNFGQYTIHTHDLSQYLRLDNS 309
Query: 297 AMRALNVLE--SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
A+RALN+ +T ++KN S++GL+NR C G G+RLL WLKQPL++V+ I R ++V
Sbjct: 310 ALRALNLFPEPGQTGSSKNTSVYGLLNR-CRTGQGQRLLGQWLKQPLVNVHAIKERQNLV 368
Query: 355 QAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+ FV+D R+ L+ +LK + D+ R+ +K A L+ +V++YQ+ +RL + L
Sbjct: 369 EIFVNDNNTRELLQLDYLKLMPDMHRISKRFQKGVATLEDVVRVYQAVLRLSGLIQMLVD 428
Query: 414 YE---GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
E L++ Y++PL+ D L K+ LVE ++DL++L + ++I +D L
Sbjct: 429 METPSDTHQQLLETTYIEPLKQ--HDAALAKYAELVEATIDLNELTHHNFVIKPDFDDDL 486
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
+K + ++ H+ +L + +K L L+ +G+ R+T+ + +R K
Sbjct: 487 RQIKEALDDTRDKLDEQHRLAGKELKMDTEKKLHLENHHVYGYCLRVTRTDAGLVRNK-- 544
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+ + T K G+ FTN L+ L + ++ + E Y Q LV VIQ A ++ + L
Sbjct: 545 KGYSDIATVKGGLYFTNEALRDLANGFKDLSERYSRSQSGLVKEVIQIASSYCSPLEKLN 604
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDV-GDIILEGSRHPCVEAQDWVNFIPNDC 649
+L+ LDV++SFA ++ + P PYT+P ++ D+ L +RHPC+E D VNFIPND
Sbjct: 605 VVLAHLDVIVSFAHVSENAPVPYTKPIVSEKGTNADLELRDARHPCLEVMDDVNFIPNDT 664
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGA 708
+++RG S F +ITGPNMGGKST+IRQVG+ LMAQVG FVP + A + V DCI ARVGA
Sbjct: 665 EMVRGSSEFLVITGPNMGGKSTYIRQVGIIALMAQVGCFVPAEAGAKLPVFDCILARVGA 724
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
GD QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E + I
Sbjct: 725 GDSQLKGVSTFMAEMLETATILKTATKDSLIIIDELGRGTSTYDGFGLAWAISEWIATNI 784
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS------TSRKLTMLYKV 822
R FATHFHELT LA Q V N HV AH+ R +T+LYKV
Sbjct: 785 RCKCFFATHFHELTNLA---------SQQTHVRNLHVVAHVKQRQGGSRQDRDITLLYKV 835
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISD 882
EPG DQS GI+VAE ANFP SV+ LA+ KA ELED+ S ++ S
Sbjct: 836 EPGISDQSLGINVAELANFPASVIALAKRKAEELEDYDEDDPKSGKTVLD--------SL 887
Query: 883 PNDMSR-GAARAHQFLKEFSDMPLET----------MDLKEALERVKRMKDDLEKDAGDC 931
P D+++ GAA +FLK ++ + D +E L+ +++M D+
Sbjct: 888 PEDVTKEGAALIDEFLKTWASRTQQEDAGTAKRARHADPEEELQELRKMVDEFRPRIEAN 947
Query: 932 CW 933
W
Sbjct: 948 AW 949
>gi|170107109|ref|XP_001884765.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640327|gb|EDR04593.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 965
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/905 (40%), Positives = 552/905 (60%), Gaps = 87/905 (9%)
Query: 21 FLSFYKTLPN---DTRAVRFFDRR---DYYTAHGENATFIAKTYYHTTTALRQLGTGSDA 74
F+ F+ LP +T +R F R ++Y+A+G +ATF+A+ +HT + ++ LG+G
Sbjct: 1 FIPFFNKLPKKSPETGTLRLFHRTGSDEFYSAYGPDATFVAQHVFHTNSVIKYLGSGG-K 59
Query: 75 LSSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNWRLVKSGTPGNLGSYEDV 128
L SV++ ++ +T+ R+ L + +E++ G G + +RL K +PGNL + ED+
Sbjct: 60 LPSVALKVSVAQTLLREALTTK-QLRVEIWVPEPGQGKKQTKFRLDKEASPGNLQAVEDL 118
Query: 129 LFANNEMQDTPVIVAL--------FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
LF N+++ +P+++A+ + +IG+ + D + R LG+A+F+D+ F+N
Sbjct: 119 LFVNSDLLSSPIVMAVKLASAPAGASGAKGKLKSIGIAFADTSIRQLGVADFVDNDLFSN 178
Query: 181 VESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
+ES ++ L KE ++PT + + L+ L RCGV++TERK +EF +++ D
Sbjct: 179 LESLVIQLSVKEAVIPTGTASGTTDRDVDLNKLKSVLDRCGVVITERKPSEFTAKNIADD 238
Query: 236 LDRLVRGSVEPVRDLVSG------FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDS 289
L RL++ S+ VS AP AL AL++Y LLSD SN+ Y I + L
Sbjct: 239 LPRLLKNSLASSSADVSMTIPQLLLPFAPSALSALVTYLSLLSDPSNHDAYKIFTHDLSQ 298
Query: 290 YMRLDSAAMRALNVLESKTDA---NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNE 346
YM+LD++A RAL++ E+ + +N +LFGL+N+ C G RLL +WLKQPL++++E
Sbjct: 299 YMKLDASATRALSLTEAPGNVGTTTRNTTLFGLLNK-CKTAQGARLLGVWLKQPLVNLHE 357
Query: 347 INARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP 405
I+ R ++V+ FV+DT R+ L+ +LK + DI+RL ++ A L+ +V++YQ ++LP
Sbjct: 358 IHKRQNLVETFVEDTNSRRTLQDDYLKMMPDIQRLSKRFQRSAASLEDVVRVYQMVLKLP 417
Query: 406 YIRSAL---QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMI 462
+ L Q ++S L+ E +L PL+ + +L+K+ +VE ++DLD+L+N Y+I
Sbjct: 418 GMIETLGGIQSENDEYSVLVDETFLKPLKEC--EANLSKYAEMVEQTLDLDELDNHNYVI 475
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
S + L L + + +++ H++ DL L +DK L+L G+ R+TK +
Sbjct: 476 KSDFHPTLQELAEKL----KDVNNEHRKAGKDLGLDLDKKLQLQNHPVNGYCLRVTKADA 531
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTF 582
K LT ++ L T K GV F LK+L + + ++ + Y Q LV VI A T+
Sbjct: 532 ----KNLTDKYTELNTNKGGVFFRTKALKQLAEDFAELSQTYSRTQSGLVKEVINIAATY 587
Query: 583 SEIFKSLATMLSELDVLL------------------SFADLASSCPTPYTRPDIN--PPD 622
+ + +++ +++ LDV++ S A ++ + PTPY +P ++
Sbjct: 588 TPVLETVDVIIANLDVIIRQNKPLETTALFTDDYCYSLAHVSVNAPTPYVKPRVSNYSQG 647
Query: 623 VGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
G++IL+ +RHPC+E QD V+FI ND ++I+ S FQIITGPNMGGKST+IRQVGV LM
Sbjct: 648 SGNLILKQARHPCLEVQDEVDFIANDVEMIKDSSEFQIITGPNMGGKSTYIRQVGVVSLM 707
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQVG FVPC+ A + + D I RVGAGD QL+GVSTFM EMLETA+IL+ + SLIIID
Sbjct: 708 AQVGCFVPCEEAEVPIFDSILCRVGAGDSQLKGVSTFMAEMLETATILQASILYSLIIID 767
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
ELGRGTSTYDGFGLAWAI EH+ +I A LFATHFHELTAL +Q+ V N
Sbjct: 768 ELGRGTSTYDGFGLAWAISEHIASQIHAFCLFATHFHELTAL---------DQQIPHVKN 818
Query: 803 YHVSAHIDST-------SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
HV AHI+++ R +T+LYKVEPG DQSFGIHVAE ANFPESVV LA+ KA E
Sbjct: 819 LHVVAHIEASMSGKSYRDRAITLLYKVEPGISDQSFGIHVAELANFPESVVKLAKRKADE 878
Query: 856 LEDFT 860
LEDF+
Sbjct: 879 LEDFS 883
>gi|343429855|emb|CBQ73427.1| probable DNA mismatch repair protein MSH2 [Sporisorium reilianum
SRZ2]
Length = 950
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/871 (40%), Positives = 527/871 (60%), Gaps = 45/871 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
P+L LD F +K++P +R FDR D+Y+AHG++A IA + T +AL+
Sbjct: 15 PDLGLDNAAESSFCQVFKSMPKPAPGTLRLFDRSDFYSAHGDDAVLIANLVFKTHSALKY 74
Query: 68 LGTGSD--ALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG----SNWRLVKSGTPGN 121
LG+G L S+++S + R+ L R +E+Y +G + W ++K +PGN
Sbjct: 75 LGSGGKDKGLPSITLSVAAAKNFLREALTTR-QMRVEIYANAGGKRNNQWTIIKQASPGN 133
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L ED++F N ++ +P+++AL R+ TIG + D + R L + E+ ++ F+N
Sbjct: 134 LQQMEDMIFVNADIVSSPIVMALKLTTRDGVKTIGAAFADASNRELCVTEYAENDLFSNT 193
Query: 182 ESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV 240
ES ++ LG KEC+LP + + + K LRD + RCGV++ + K+ +F +++ QDL RL+
Sbjct: 194 ESLMIQLGVKECILPKDDKGADVDLKKLRDVIERCGVVMFDNKRADFAGKNIDQDLRRLL 253
Query: 241 R----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSA 296
R G P DL ++A A AL++Y LL+DESN+G Y IR + L Y+RLD++
Sbjct: 254 REESSGVTIPELDL----KVAMAAASALITYLALLTDESNFGQYTIRTHDLSQYLRLDNS 309
Query: 297 AMRALNVLE--SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
A+RALN+ +T ++KN S++GL+NR C G G+RLL WLKQPL++V+ I R ++V
Sbjct: 310 ALRALNLFPEPGQTGSSKNTSVYGLLNR-CRTGQGQRLLGQWLKQPLVNVHAIQERQNLV 368
Query: 355 QAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+ FV+D A RQ ++ +LK + D+ R+ +K A L+ +V++YQ+ +RLP + L
Sbjct: 369 ELFVNDNAARQLIQTDYLKLMPDMHRISKRFQKGVATLEDVVRVYQAVLRLPGLIQTLSD 428
Query: 414 YEG---QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
+ + + L+ Y+ P + L KF ALVE ++DL++L ++I +D L
Sbjct: 429 IDTPSEEHAELLATTYIHPFQ--LHSSALTKFTALVEATLDLNELAQHNFVIKPDFDDNL 486
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
+K + ++ H+ +L + +K L L+ +G+ R+T+ + +R K
Sbjct: 487 RQIKEALDDTRDKLDEQHRLAGKELRMDTEKKLHLENHHVYGYCLRVTRTDAGLVRNK-- 544
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+ + T K G+ FTN L+ L + ++ + + Y Q LV VI+ A T+ + L
Sbjct: 545 KGYSDIATVKGGLYFTNEALRDLANDFKDLSDRYGRSQSGLVKEVIRIASTYCSPLEKLN 604
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDV-GDIILEGSRHPCVEAQDWVNFIPNDC 649
+L+ LDV++SFA ++ S P PY +P ++ D+ L +RHPC+E D V FIPND
Sbjct: 605 VVLAHLDVIVSFAHVSDSAPIPYVKPAVSEKGTNADVDLREARHPCLEVMDDVAFIPNDT 664
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGA 708
+++RGKS F +ITGPNMGGKST+IRQVG+ LMAQ+G FVP + A + V DCI ARVGA
Sbjct: 665 EMVRGKSEFLVITGPNMGGKSTYIRQVGIIALMAQIGCFVPAAQGAKLPVFDCILARVGA 724
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
GD QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E + +
Sbjct: 725 GDSQLKGVSTFMAEMLETATILKTATVDSLIIIDELGRGTSTYDGFGLAWAISEWIATHV 784
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS------RKLTMLYKV 822
R LFATHFHELT LA + + V N HV AH++ R +T+LYKV
Sbjct: 785 RCKCLFATHFHELTNLASQQPH---------VRNLHVVAHVEQKEGGSRQDRDITLLYKV 835
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKA 853
EPG DQS GI+VAE ANFP SV+ LA+ KA
Sbjct: 836 EPGISDQSLGINVAELANFPPSVIALAKRKA 866
>gi|1000885|gb|AAB59572.1| The deletion results in premature stop [Homo sapiens]
Length = 810
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/790 (43%), Positives = 498/790 (63%), Gaps = 30/790 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD + FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFATHFHEL 781
+FAT F L
Sbjct: 778 CMFATIFMNL 787
>gi|388582942|gb|EIM23245.1| DNA mismatch repair protein [Wallemia sebi CBS 633.66]
Length = 906
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/912 (38%), Positives = 558/912 (61%), Gaps = 49/912 (5%)
Query: 22 LSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTG--SDALSSV 78
+ FYK +P +R FDR D+Y+A+G +A ++A + T T L+Q+ + L +
Sbjct: 1 MGFYKKMPKRLEGTIRLFDRGDFYSAYGVDAEYVATEVFKTQTVLKQMTSKKLQMTLPFL 60
Query: 79 SVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGSYEDVLFANNE 134
S+++ ++ R+ L R +E++E G ++ L K+ +PGNL ED+LFA+++
Sbjct: 61 SLNRISAQSFLREALTAR-QLKIEIWESEGGKKAQSFVLAKTASPGNLQPVEDLLFASSD 119
Query: 135 MQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
+ P+ +A+ + +E +G Y D + R LGL+EF+D+ F+NVES ++ LG KECL
Sbjct: 120 ILTAPISMAIKLSVKEGLLYVGSAYCDASCRELGLSEFVDNDLFSNVESLIIQLGVKECL 179
Query: 195 LPT-EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-GSVEPVRDLVS 252
+P+ + + L+ + RCG+++TE K ++F T+D+ QDLDRL++ G+++ +
Sbjct: 180 MPSNDKGTDHDLTKLKTLIERCGIVVTEVKPSDFNTKDIEQDLDRLLKDGAIKQSSEF-- 237
Query: 253 GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLES--KTDA 310
+IA + L++Y L+ D +N+ + ++ + L YM+LD++A+RAL++ S +
Sbjct: 238 NMKIAMSSASVLINYLGLMGDAANFSQFTLKNHDLSHYMKLDASALRALSLFPSPGEVGG 297
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-Q 369
+KN SL+GL+N C G+RLL WLKQPL+ ++EI++R ++V+ F+++ LR +R Q
Sbjct: 298 SKNMSLYGLLNH-CKTAQGQRLLAQWLKQPLMTLHEIHSRQNLVEWFMNEVELRGTMREQ 356
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ-----YEGQFSSLIKE 424
+ ++ D+ RL ++ A L+ +V+ YQ+ + +P + ++Q + LI+E
Sbjct: 357 IMTKMPDLHRLSKRFQRGVANLEDVVRTYQACLNIPKLLELIRQTQESVMDDSLKLLIEE 416
Query: 425 RYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
Y+ P E + LN I +VE+++DLD+L N Y+I +D L A + + E + +
Sbjct: 417 TYIKPFEEFSGS--LNMLIEMVESTIDLDELANHNYVIKPEFDDDLKAYRRKLEVIRDGL 474
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
H+ DL L + K L +++ +G+ FR+TK E + ++ L T K G
Sbjct: 475 DDEHQAVGDDLGLDLGKKLHMERHQTYGYCFRVTKAEAKSVSN--NKKYHELSTLKSGTY 532
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
F + L+ LGD+Y++V Y Q LV V+ A T+ + +SL +L+ +DVL+ FA
Sbjct: 533 FRTSTLRDLGDEYKEVQTAYDKKQSSLVKEVVGIAATYCPVLESLDNVLAHVDVLMDFAY 592
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGP 664
++ P+ +P++ D+ L +RHPC+E QD V+FI ND L R +S F I+TGP
Sbjct: 593 VSDKSANPFVKPEVLEKGTSDMTLSEARHPCLEVQDGVDFIANDVTLKRDESEFLIVTGP 652
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NMGGKST+IRQ+G+ LMAQ+G +VPC +A++ V DCI +RVGAGD Q++G+STFM EML
Sbjct: 653 NMGGKSTYIRQIGIIALMAQIGCYVPCTKATVPVFDCILSRVGAGDSQIKGISTFMAEML 712
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
ETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E++ E+R+ +FA+HFHELTAL
Sbjct: 713 ETATILKSATRDSLIIIDELGRGTSTYDGFGLAWAISEYIAVELRSFCVFASHFHELTAL 772
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRK--LTMLYKVEPGACDQSFGIHVAEFANFP 842
++ Q V N HV AH++ + + +++LYKVEPG D+SFGI+VA+ A FP
Sbjct: 773 SN---------QQTHVKNLHVVAHVEQENDQEDVSLLYKVEPGISDKSFGINVAQMAGFP 823
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
ESV+ LA+ KA ELED K+++ SD +D++ G +F++ F++
Sbjct: 824 ESVIKLAKRKADELEDLEGHE-----------EKKQKFSD-DDINTGVNLVKEFMQSFAE 871
Query: 903 MPLETMDLKEAL 914
ET + +EAL
Sbjct: 872 SVQETNE-REAL 882
>gi|71017883|ref|XP_759172.1| hypothetical protein UM03025.1 [Ustilago maydis 521]
gi|46098793|gb|EAK84026.1| hypothetical protein UM03025.1 [Ustilago maydis 521]
Length = 963
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/920 (40%), Positives = 554/920 (60%), Gaps = 53/920 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
P+L LD F +K++P T +R FDR D+Y+AHG++A IA + T +AL+
Sbjct: 15 PDLGLDNAAESSFCQTFKSMPKPTPGTLRLFDRSDFYSAHGDDAILIANLVFKTHSALKY 74
Query: 68 LGTG---SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPG 120
LG+G + L S+++S + + R++L R +E+Y +G+ W +VK +PG
Sbjct: 75 LGSGGKDNGGLPSITLSVAATKNLLREVLTSR-QMRVEIYGNAGAKRNNQWSIVKQASPG 133
Query: 121 NLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
NL ED++F + ++ +P+++AL R+ T+G + D T R L ++E+ ++ F+N
Sbjct: 134 NLQQMEDMIFVDADIVSSPIVMALKLTTRDGVKTVGAAFADATNRELCVSEYAENDLFSN 193
Query: 181 VESALVALGCKECLLPTEAVK-SSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
ES ++ LG KEC+LP + ++ K LR+ + RCGV++ + K+ +F R++ QDL RL
Sbjct: 194 TESLIIQLGVKECILPKDDKGVDADLKKLREVIERCGVVMFDSKRADFSGRNIDQDLRRL 253
Query: 240 VRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
++ + ++A A AL+SY LL+DESN+G Y IR + L Y+RLD++A+R
Sbjct: 254 LKEESCGLNLTELDLKLAMAAASALMSYLALLTDESNFGQYSIRTHDLSQYLRLDNSALR 313
Query: 300 ALNVLE--SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
ALN+ +T ++KN S++GL+NR C G G+RLL WLKQPL++V+ I R ++V+ F
Sbjct: 314 ALNLFPEPGQTGSSKNTSIYGLLNR-CRTGQGQRLLGQWLKQPLVNVHAIEQRQNLVELF 372
Query: 358 VDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
V+D + RQ ++ +LK + D+ R+ +K A L+ +V++YQ+ +RLP + L E
Sbjct: 373 VNDNSTRQLIQNDYLKLMPDMHRISKRFQKGIATLEDVVRVYQAILRLPGLIQTLADMET 432
Query: 417 ---QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
S L+K YLDP E+ L KF LVE ++DL +L ++I +D L +
Sbjct: 433 PSEALSELLKTSYLDPFEA--HRAALTKFNELVEATLDLTELSQHNFVIKPDFDDNLREI 490
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
K + ++ H+ +L + +K L L+ +G+ R+T+ + +R K +
Sbjct: 491 KEALDDTRDKLDEQHRLAGKELRMDTEKKLHLENHHVYGYCLRVTRTDAGLVRNK--KGY 548
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
+ + T K G+ FTN L+ L + ++ + E Y Q LV VIQ A ++ + L +L
Sbjct: 549 MDIATVKGGLYFTNEALRDLANDFKDLSERYSRSQSGLVKEVIQIASSYCPPLEKLNVVL 608
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDV-GDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
+ LDV++SFA ++ S P PY +P ++ D+ L +RHPC+E D +NFI ND +++
Sbjct: 609 AHLDVIVSFAHVSDSAPVPYVKPVVSEKGTNADVDLREARHPCLEVMDDINFISNDTEMV 668
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGAGDC 711
RG+S F +ITGPNMGGKST+IRQVG+ LMAQ+G FVP + A + V DCI ARVGAGD
Sbjct: 669 RGQSEFLVITGPNMGGKSTYIRQVGIIALMAQIGCFVPAAQGARLPVFDCILARVGAGDS 728
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI E + IR
Sbjct: 729 QLKGVSTFMAEMLETATILKTATSDSLIIIDELGRGTSTYDGFGLAWAISEWIATNIRCK 788
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS------RKLTMLYKVEPG 825
LFATHFHELT LA + + V N HV A + R +T+LYKV+PG
Sbjct: 789 CLFATHFHELTNLAAQQPH---------VRNLHVVALVKQKEGGSRQDRDITLLYKVQPG 839
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISD--P 883
DQS GI+VAE ANFP SV+ LA+ KA ELED+ +V + + D P
Sbjct: 840 ISDQSLGINVAELANFPPSVIALAKRKAEELEDY------------DVDEQTASVLDSLP 887
Query: 884 NDMSR-GAARAHQFLKEFSD 902
D+++ GAA ++FLK +++
Sbjct: 888 EDVTKQGAALINEFLKTWAE 907
>gi|330840928|ref|XP_003292459.1| hypothetical protein DICPUDRAFT_50444 [Dictyostelium purpureum]
gi|325077299|gb|EGC31021.1| hypothetical protein DICPUDRAFT_50444 [Dictyostelium purpureum]
Length = 919
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/960 (38%), Positives = 560/960 (58%), Gaps = 93/960 (9%)
Query: 2 DDEQNKLPELKLDAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYH 60
D+EQ + ++ L K+ +GF+SF++ L D +R FDR+ YY+ HG++A F+A ++
Sbjct: 3 DNEQEETTQVVL--KEDKGFVSFFQGLDLTDKDTIRLFDRKGYYSIHGDDAVFVALMHFK 60
Query: 61 TTTALRQLGTGSD-----------------------ALSSVSVSKNM-FETIARDLLLER 96
+ +L+ GT ++ L+ +++ + +E I ++L E+
Sbjct: 61 SKKSLKYWGTANEMPKKKIKLDSSSSPPPSNEDTNLGLACLTIRQGFEYEQIIKELFEEK 120
Query: 97 TDHTLELYEGSGS---NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGC 153
+E++ + W L K G+ GN +EDVLF E V++AL +
Sbjct: 121 --KKIEIWAAKPNRINQWELSKKGSRGNTQQFEDVLFNYTE---NSVMMALKVTREKGSI 175
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
G+ + D T + LG++EF+D+ + +N+ S ++ + KECLL ++ K+ + +++ L
Sbjct: 176 VFGIAFGDATFKTLGVSEFMDNDNLSNLSSFIMQMSIKECLLYSDP-KNYDYAKVKEKLA 234
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
+ TE K +F +++ QDL RL+ + DL E A + L+ + +LLS+
Sbjct: 235 EADIPFTEVPKADFSSKNAEQDLTRLLGSVKNNLLDLEK--ENAIQSASCLIKHLDLLSN 292
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE-----------SKTDANKNFSLFGLMNR 322
+ +G + + K+ L+ YM+LDSA+ R L++++ S + K+ SL+ L+N+
Sbjct: 293 PNYFGKFKLEKFDLNKYMKLDSASFRGLHIIDLKEHNSSGLPNSSATSTKDQSLYNLLNQ 352
Query: 323 TCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLM 381
C MG RLL W+KQPLLD EI RL+ V+ F +D LRQ LR + LK+I D++RL
Sbjct: 353 -CNTPMGSRLLLQWVKQPLLDTEEIEMRLNFVETFFNDIELRQSLRSNDLKKIGDLDRLS 411
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNK 441
L ++A L+ V LY RLP + S L + G ++K ++D LES+ +D K
Sbjct: 412 KKLHGQKASLEDCVNLYGIVNRLPVVLSTLNGHSGVHQEMLKANFIDSLESIIND--FQK 469
Query: 442 FIALVETSVDLDQL-ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD 500
F A+VE ++DLD E EY+I SS+D L+ ++ ++ ++I +TA LDL
Sbjct: 470 FCAMVEKTIDLDLANEKHEYVIRSSFDEALAEIQKLKDKTSQKIEGFRIKTADKLDLDES 529
Query: 501 KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKV 560
K +KL + G++ RI++K+E K+R K +FI+ T+KDGV+F+ ++ L + Y+K+
Sbjct: 530 K-VKLHYSEKDGYLLRISRKDEVKLRDK--KEFIIYATQKDGVRFSIKEINNLNETYKKL 586
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
EY N Q L R +Q A +F + + L+++++ LDV ++ A ++S PTP+ RP+I+P
Sbjct: 587 SAEYANKQDGLAKRTLQIAASFVPLIEDLSSLIATLDVFVTMAHISSIAPTPFVRPEIHP 646
Query: 621 PDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
G+ ++ G RHPCVE QD V+FI ND +LIR +S FQIITGPNMGGKSTFIRQVG+ +
Sbjct: 647 LGTGNTVIFGGRHPCVETQDGVSFIANDIELIREESQFQIITGPNMGGKSTFIRQVGLIV 706
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
LMAQ+G FVP +A +SV DCI +RVGAGD QLRGVSTFM EMLET+ ILK AT SLII
Sbjct: 707 LMAQIGCFVPAQKAIVSVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVATKNSLII 766
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
IDELGRGTSTYDGFGLAW I E++ +I LFATHFHELT LA + V
Sbjct: 767 IDELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELTILA---------DIIPVV 817
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HVSA ++ + T+LYKVE GACDQSFGIHVA A+FP+ V+ A+ KA ELE F
Sbjct: 818 KNLHVSASTENNT--FTLLYKVESGACDQSFGIHVAVLADFPQQVIETAKLKAKELESFE 875
Query: 861 PSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRM 920
+ + + FL+EF ++ T + E+ E VK +
Sbjct: 876 SNTL-------------------------KQNHNSFLEEFKEIDFNTQNTTESYEIVKSL 910
>gi|328870366|gb|EGG18740.1| mutS like protein [Dictyostelium fasciculatum]
Length = 923
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/893 (40%), Positives = 545/893 (61%), Gaps = 63/893 (7%)
Query: 16 KQARGFLSFYKTLPN-DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR-------- 66
K+ +GF +FY++L +RFFDR+ YY+ HG++A ++A ++ T AL+
Sbjct: 18 KEDKGFTTFYRSLETVQDSTIRFFDRKGYYSIHGQDAIYVALLHFKTKKALKYWANDLAP 77
Query: 67 -----QLGT------------------GSDALSSVSVSKNM-FETIARDLLLERTDHTLE 102
+LG ++ L+ ++V + FE I + L ++ +E
Sbjct: 78 TKKKQKLGNSSSSSLDSIATAEEDDEESNNGLAYLTVRDGIEFEGIVQKLFEQK--QKVE 135
Query: 103 LYEGSGS---NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGY 159
++ S W ++K G+PGNL +ED+L ++D ++VAL + E IG +
Sbjct: 136 VWAPKASRVGQWEIIKKGSPGNLQMFEDIL----NIKDQSLMVALRVSTIEGNRVIGAAF 191
Query: 160 VDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVML 219
D T + +G+ +F+D+ H +N+ S L+ +G KECL+ + S +CK + D L V
Sbjct: 192 GDSTLKTIGVLQFIDNDHLSNLSSFLLQMGIKECLISVDKKNSVDCKKVMDKLQDSEVPF 251
Query: 220 TERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGN 279
TE ++F T+++ QDL RL+ GS+ V + + E+A +L L+ + +LLS++S +G
Sbjct: 252 TEVPNSDFNTKNIEQDLTRLL-GSINNVLNEIEK-ELAMQSLSCLIKHLDLLSNQSYFGK 309
Query: 280 YYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQ 339
+ + ++LD++MRLD+A + LN++ S + S+F L+++ C MG R L W++Q
Sbjct: 310 FKLVSFNLDNFMRLDAATFKGLNIISSDPTNKQGMSIFNLLDK-CNTPMGSRKLSQWVRQ 368
Query: 340 PLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLY 398
PL+D EI RL+ V+ FV+ LRQ LR + LK+I D+ERL L +A L+ +V LY
Sbjct: 369 PLVDQEEIETRLNFVEIFVNALELRQALRSNDLKKIGDLERLSKKLVGGKATLEDVVNLY 428
Query: 399 QSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ-LEN 457
RL + S+L+ YE Q S +++ + PLE + + +F A+VE +VDLDQ E
Sbjct: 429 GVVQRLSVLLSSLRSYEDQGSEMVESTFTQPLEQIIAE--FQQFSAMVEKTVDLDQAYET 486
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA-LKLDKGTQFGHVFR 516
EY+I SS+ LS + N++++ ++I+ L ++ A DL +D+A +KL + + G++ R
Sbjct: 487 HEYVIRSSFSDELSEIHNKKQNCMKKINQLREKIADDL--GIDEARVKLHQSDKDGYLVR 544
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
+++K+E IR ++IV T+KDGV+F+ + ++KL + Y +Y Q+ LV R +
Sbjct: 545 LSRKDEKLIRG--NAKYIVYGTQKDGVRFSTSDIRKLNEAYMSSSVQYNEKQQGLVQRAL 602
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ +F + L ++++ LDV S ++SS P+PY RP ++P G+I + G RHPCV
Sbjct: 603 EITTSFVPLIDDLCSLIATLDVFASLGHVSSSAPSPYVRPIVHPMGKGNITIVGGRHPCV 662
Query: 637 EAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
E QD VNFI ND L R KS FQIITGPNMGGKSTFIRQVG+ LMAQ+G FVP ++A I
Sbjct: 663 EVQDNVNFISNDIDLTRDKSTFQIITGPNMGGKSTFIRQVGIITLMAQIGCFVPAEQAEI 722
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
S+ DCI R+GAGD QLRGVSTFM EMLETA ILK AT SLIIIDELGRGTSTYDGFGL
Sbjct: 723 SIVDCILTRIGAGDSQLRGVSTFMAEMLETAYILKTATKNSLIIIDELGRGTSTYDGFGL 782
Query: 757 AWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
AW I E++ +I A LFATHFHELT L + V N HV A+++ S L
Sbjct: 783 AWGIAEYICHQIGAFCLFATHFHELTVLQEILP--------LTVKNLHVQANVNDHS-GL 833
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDA 869
T++YKV+ GACDQSFGIHVA A FP+ VV +AR KA ELE F +++ S D+
Sbjct: 834 TLMYKVKEGACDQSFGIHVAIMAGFPDQVVQVARLKAKELESFESNSLASLDS 886
>gi|321461885|gb|EFX72912.1| mismatch repair ATPase Msh2 [Daphnia pulex]
Length = 915
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/926 (40%), Positives = 556/926 (60%), Gaps = 50/926 (5%)
Query: 1 MDDEQNKLPELKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYY 59
M D N +PE+ +GF+SF+ LP +RFFDR +++T +G++A ++ Y+
Sbjct: 1 MADSTN-VPEIP----HEQGFISFHGNLPEKLATTLRFFDRGEFFTLYGQDALLASRDYF 55
Query: 60 HTTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
T + ++ LG G+ L SV +K+ FE ARD+LL + + +E+Y GS S+W L +P
Sbjct: 56 KTHSVVKMLGYGAKKLESVVFNKSHFENFARDVLLVK-HYCIEIYNGSKSDWSLQYQASP 114
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
GNL ED++F + ++ I+A F EN IG YVD R + +A+F D+ F+
Sbjct: 115 GNLTQVEDLIFGSTDITSQVGILA-FKIGSEN--QIGCSYVDTYARKILVAQFSDNDAFS 171
Query: 180 NVESALVALGCKECLLP-TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
N+ES +V L KE L+P EA + KT+ L R G+++ E KK EF + + V+ L+R
Sbjct: 172 NLESLIVQLSPKEVLIPHGEAYVAP--KTM---LNRHGLLVNENKKAEFSSTESVRLLNR 226
Query: 239 LVR---GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L+R G E L + + AL AL+ + +L++DE+N+G Y ++ + YMRLD
Sbjct: 227 LLRFKKGQQENAAALPEVSLDHSMAALAALVKHLDLMADETNFGQYSLQNFDFTQYMRLD 286
Query: 295 SAAMRALNV----------LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
SAA AL++ + SK A + + L+N+ T+G G+RLL W+KQPL D
Sbjct: 287 SAASAALHLTSYGAEVSTMVTSKAGAPRTIA--ALLNKCRTSG-GQRLLAQWIKQPLTDK 343
Query: 345 NEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
N I+ RLD+V+ FV+D LRQ + + HL+R+ D +RL L+K +A LQ + KLY R
Sbjct: 344 NRIDRRLDVVETFVNDVQLRQTITEDHLRRMPDYQRLAKKLQKAKANLQDLYKLYLGLSR 403
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMIS 463
LP + L + +G ++++ + PL + ++ L K +VET++DL+Q + GE++I
Sbjct: 404 LPVLVDCLLENQGDHAAVLIGVLIQPLRNA--NEKLVKLKEMVETTIDLNQADRGEFIIK 461
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
+ +D L LK + + + + + ASDL L K++KL+ Q G+ FR+T K+E
Sbjct: 462 ADFDDQLGELKKDLDDCGSRAEKVLSRAASDLKLETSKSVKLESNAQIGYYFRVTLKDEK 521
Query: 524 KIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
+R + ++T K+GV+F N L ++ + Y KV ++Y+ Q +V ++ A +
Sbjct: 522 NLRN--NRNYHTIDTNKNGVRFRNPDLAQVNETYLKVRQDYEQQQSSVVKEILSVAAGYV 579
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN 643
E +SL LS+LDVL SFA + S P PY RP I G I L RHPC+E QD VN
Sbjct: 580 EPLQSLNDALSKLDVLTSFAVCSISAPIPYVRPQILEKGSGSIELIQVRHPCMELQDGVN 639
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
FIPND + F IITGPNMGGKST++R +GV +LMAQ+G FVP A+IS+ D I
Sbjct: 640 FIPNDAIFHKDGHRFYIITGPNMGGKSTYLRSIGVAVLMAQIGCFVPALSATISIVDAIL 699
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
ARVGAGDC L+GVSTFM EM+ETA+I + AT SL+IIDELGRGTST+DGFGLAWAI EH
Sbjct: 700 ARVGAGDCHLKGVSTFMAEMIETANITRTATKDSLVIIDELGRGTSTFDGFGLAWAIAEH 759
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
+ +I+ LFATHFHELTALA E + V N HV+A + T+LY+V+
Sbjct: 760 IAVKIQPYALFATHFHELTALADE---------VPAVDNLHVTALTGDNT--FTLLYRVQ 808
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
PG+CDQSFG+HVAE +FP+ V+ +A++KA ELE P+ SD + + ++ ++
Sbjct: 809 PGSCDQSFGLHVAELVHFPQEVLEIAQKKAKELEAIQPNNNESDSGEPTMKRRKGDNAEG 868
Query: 884 NDMSRG-AARAHQFLKEFSDMPLETM 908
+ + R RA + +++ D+ E M
Sbjct: 869 DTLMRTYLERAKKIMEQKKDVNCEEM 894
>gi|183582335|dbj|BAG28295.1| mismatch repair protein [Mesocricetus auratus]
Length = 782
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/785 (42%), Positives = 495/785 (63%), Gaps = 30/785 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L+ F+ F++ +P + VR FDR D+YTAHGE+A A+ + T ++ LG
Sbjct: 9 LQLEGAAEAAFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYLG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNKAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M D+ IV + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSDSVGIVGVKMSMVDGQRHVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQVIQRGGILITERKRADFSTKDICQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+S +G + + + YMRL
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSYFGQFELTTFDFSQYMRL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DMAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTAQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AF +D+ LRQ L++ L +R D+ RL +++ A L +LYQ +LP + AL
Sbjct: 362 LVEAFAEDSELRQTLQEDLLRRFPDLNRLAKKFQRQAANLHDCYRLYQGVNQLPSVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++Y+G+ +L+ ++ PL L D +KF ++ET++D+DQ+EN E++I S+D LS
Sbjct: 422 KKYQGRHQALLLAVFVTPLIDLRSD--FSKFQEMIETTLDMDQVENHEFLIKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + LE+++ S A L L K +KLD QFG+ FR+T KEE +R
Sbjct: 480 ELREVMDGLEKKLQSTLISAARGLGLDPGKQMKLDSSAQFGYYFRVTCKEEKVLRN--NK 537
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
F ++ +K+GVKFTN++L L ++Y K EY+ Q +V ++ + + E ++L
Sbjct: 538 NFSTVDIQKNGVKFTNSELSALNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLND 597
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L++LD ++SFA ++++ P PY RP I G I+L+ SRH CVE QD V FIPND
Sbjct: 598 VLAQLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIVLKASRHACVEVQDEVAFIPNDVHF 657
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD
Sbjct: 658 EKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDS 717
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A
Sbjct: 718 QLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAF 777
Query: 772 TLFAT 776
+FAT
Sbjct: 778 CMFAT 782
>gi|336363101|gb|EGN91554.1| hypothetical protein SERLA73DRAFT_164445 [Serpula lacrymans var.
lacrymans S7.3]
Length = 888
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/784 (43%), Positives = 495/784 (63%), Gaps = 48/784 (6%)
Query: 108 GSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVAL----FPNFRENGCTIGLGYVDLT 163
S + L K +PGNL + ED+LF N+++ P+++A+ + T+G+ + D +
Sbjct: 41 ASKFVLEKEASPGNLQAVEDLLFVNSDILSAPIVMAIKIVSASADKTKTKTVGIAFADTS 100
Query: 164 KRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCGVM 218
R LG+A+F+D+ F+N ES ++ L KE L+PT + + L+ L RCGV+
Sbjct: 101 IRQLGVADFVDNDLFSNTESLIIQLSVKEALIPTGTASGNTDRDIDLNKLKAVLERCGVV 160
Query: 219 LTERKKTEFKTRDLVQDLDRLVR---------GSVEPVRDLVSGFEIAPGALGALLSYAE 269
+TE+K +EF +++ DL +L+ G+ + + L +AP AL AL++Y
Sbjct: 161 ITEKKPSEFTAKNIEDDLMKLLVQDPGSSATVGNPQTISQL--SLPVAPSALSALVNYLS 218
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA---NKNFSLFGLMNRTCTA 326
LL+D SN+G + IR + L YMRLD++A+RALN+ E A N+N +L GL+N+ C
Sbjct: 219 LLTDPSNHGAFSIRTHDLSQYMRLDASALRALNLTEPPGSAGSINRNATLLGLLNK-CKT 277
Query: 327 GMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLE 385
G RLL WLKQPL++++EI R ++V+ FVDD++ R++L+ LK + D+ R+ +
Sbjct: 278 AQGTRLLGSWLKQPLVNLHEIQKRQNLVEMFVDDSSTRRNLQDDFLKFMPDMHRISKRFK 337
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSAL---QQYEGQFSSLIKERYLDPLESLTDDDHLNKF 442
K A L+ +V++YQ +++P + + L Q + + SL++E YL +++L K+
Sbjct: 338 KSAASLEDVVRVYQVVLKIPGLIANLEGTQTEQDDYKSLLEEIYLKDFREF--NENLCKY 395
Query: 443 IALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
+VE ++DLD+L+N +Y+I YD L L N+ + + H++ +DLDL +DK
Sbjct: 396 GEMVEQTLDLDELDNHKYVIKPDYDPRLQELANKLIEIRDGLDQEHREVGNDLDLELDKK 455
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
L L+ +G+ FR+TK + + K ++I L T K GV FT LK+L YQ+ +
Sbjct: 456 LHLENSQNYGYCFRLTKNDAKAVINK--RKYIELGTVKSGVFFTTKTLKELAGDYQETTD 513
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
Y Q LV V+ A T++ + ++L +++ LDV+LSFA ++ + P PY +P +
Sbjct: 514 TYSRTQSGLVKEVVNIAATYTPVLEALDHVIAHLDVILSFAHVSVNAPEPYVKPVMLEKG 573
Query: 623 VGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
G++IL+ +RHPC+E QD ++FIPND ++I+ +S FQIITGPNMGGKST+IRQVGV LM
Sbjct: 574 TGNLILKEARHPCLEVQDDISFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIALM 633
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQ G FVPC A + + D + RVGAGD QL+GVSTFM EMLETA+ILK AT SLIIID
Sbjct: 634 AQTGCFVPCSEAHVPIFDSVLCRVGAGDSQLKGVSTFMAEMLETATILKSATKDSLIIID 693
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
ELGRGTSTYDGFGLAWAI EH+ +IRA LFATHFHELTAL E + V N
Sbjct: 694 ELGRGTSTYDGFGLAWAISEHIASQIRAFCLFATHFHELTALDQE---------LSHVKN 744
Query: 803 YHVSAHID-------STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
HV AH+ S ++ +T+LYKVEPG DQSFGIHVA+ ANFPE+VV LA+ KA E
Sbjct: 745 LHVVAHVTQGDDEVASLNQDITLLYKVEPGVSDQSFGIHVAKLANFPENVVKLAKRKADE 804
Query: 856 LEDF 859
LEDF
Sbjct: 805 LEDF 808
>gi|302847578|ref|XP_002955323.1| hypothetical protein VOLCADRAFT_96164 [Volvox carteri f.
nagariensis]
gi|300259395|gb|EFJ43623.1| hypothetical protein VOLCADRAFT_96164 [Volvox carteri f.
nagariensis]
Length = 890
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/937 (40%), Positives = 524/937 (55%), Gaps = 114/937 (12%)
Query: 13 LDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGS 72
LD K R F+ F+KTL D +RFFDR+ YY+ HG A IA+ +Y TT +R +G
Sbjct: 25 LDDKSLRAFMGFHKTLTEDPHIIRFFDRKGYYSVHGPAANTIARQFYRTTAVVRGADSG- 83
Query: 73 DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFAN 132
L V+V++ MFETI R+LLL T H +ELYE G+ W+LV+S TPG L ++++ L+ +
Sbjct: 84 --LPYVNVNRAMFETILRELLLGGTAHIVELYESVGTGWKLVRSATPGKLSAFDEELYRS 141
Query: 133 NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE 192
EM + P++ A+ E T G+ YVD LG E + D + +E+ LV LG +E
Sbjct: 142 AEMSEVPLVAAITFTVYEGQVTAGVAYVDAASCRLGACEMVLDDQLSGLEAVLVQLGARE 201
Query: 193 CLLPTEAVK---SSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG-SVEPVR 248
++ +++ + + L L G+M+TER F + L DL ++++G +VE
Sbjct: 202 AVVNKDSLPLLDAGQRSRLTALLESVGLMVTERPAGLFSAKHLEADLAKVIKGGAVEQHG 261
Query: 249 DLVSGFEIAPGALGALLSYAELLSD---ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE 305
D++ A AL A+LSYAE++S+ + G Y + Y+ YMRLD+ A RALNVL
Sbjct: 262 DVLE-RRTACSALAAVLSYAEVMSECGQSGSGGRYVLSLYNSGCYMRLDATAQRALNVLP 320
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
++TDAN +SL+GL+NR C MGKR L WLKQPL+++ I R D V+A D +RQ
Sbjct: 321 TRTDANATYSLYGLLNR-CRTAMGKRRLKTWLKQPLVELAAIAQRHDAVEAMKGDAEMRQ 379
Query: 366 DLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE 424
LR Q + + D+ERL L+ RR LQ++ +LY++S RLP I A++ +EG ++ + E
Sbjct: 380 RLRDQQFRGLPDVERLTRKLQSRRISLQELHQLYRASARLPLIEEAIRCHEGPHAANLVE 439
Query: 425 RYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
RY DPL D +HL +F L+E ++DL++L EY+IS SYD L+ L ++ LE +I
Sbjct: 440 RYADPLAQHHDGEHLQRFEELLEAALDLERLPE-EYLISPSYDNRLATLSEAKQQLEEEI 498
Query: 485 HSLHKQTASDLDLPVDKALKLD---KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
L + A DL L +DK LKL+ RIT+KEE +R KL +++V+ETRKD
Sbjct: 499 ADLAQSAADDLGLILDKTLKLEWHRAANVRTRCLRITQKEEKNVRSKLQAKYLVIETRKD 558
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
G KFTN L+ ++ +Y Q ELV +V+ A TF E+++++A +L+ELDVLLS
Sbjct: 559 GTKFTNRALRDAAERLNAASGQYLALQSELVEQVVSVAHTFVEVWEAVAAILAELDVLLS 618
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQII 661
FA+ A P PY RPD+ PD G I L RHP VE QD V+FI NDC + RG+SWFQII
Sbjct: 619 FAEAADVAPVPYVRPDMLGPDEGIIELRECRHPNVEVQDGVSFIVNDCVMKRGESWFQII 678
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKST+IRQ A S V D RG ST
Sbjct: 679 TGPNMGGKSTYIRQ------GASSHSLVIIDELG------------------RGTST--- 711
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV-EEIRAPTLFATHFHE 780
YDGFGLAWAI EHL ++ APTLFATHFHE
Sbjct: 712 -----------------------------YDGFGLAWAISEHLAGPDVGAPTLFATHFHE 742
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN 840
LT L K VGV N +A ID +++LTMLY++ GACDQSFG+HVAE A
Sbjct: 743 LTEL----------KAAVGVKNMQATAIIDPATQRLTMLYRIGEGACDQSFGVHVAESAG 792
Query: 841 FPESVVTLAREKAAELEDFTPSAVISDDAKIEV-GSKRKRISDPNDMSRGAARAHQ---- 895
FP V+ +A ++ +LE + A++ V +KR R GA H
Sbjct: 793 FPPQVIAMANQRLKQLE--------AGQARLHVPAAKRLRTE-----GGGAPGPHHNDDE 839
Query: 896 ------------FLKEFSDMPLETMDLKEALERVKRM 920
FL+ FS +PL+ M ++A+ V +
Sbjct: 840 AAAAADVAELQSFLRRFSSLPLDGMSPEDAVTAVDHL 876
>gi|403160122|ref|XP_003320671.2| DNA mismatch repair protein MSH2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169419|gb|EFP76252.2| DNA mismatch repair protein MSH2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 980
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 369/893 (41%), Positives = 530/893 (59%), Gaps = 65/893 (7%)
Query: 7 KLPELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRR--DYYTAHGENATFIAKTYYHTTT 63
K PE+ D ++ F +K L P +R F+R ++YT +G +A ++A +Y T T
Sbjct: 9 KAPEVNEDQTASKKFCETFKNLEPCPKGTLRIFEREKGEFYTCYGPDAQYVATQFYRTNT 68
Query: 64 ALRQLG---TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWR------LV 114
LR +G G L S S+S+ T R+ L R +++Y + + L
Sbjct: 69 VLRFIGPKTNGEPGLPSCSLSRTGAITFLRECLTSR-QMRIQIYRSDQPSSKSSSSWSLA 127
Query: 115 KSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRE---NGCTIGLGYVDLTKRVLGLAE 171
+PGNL D+LF+N ++ +PVI +L+ +G +G+ + D + R LGL+E
Sbjct: 128 VQASPGNLEPLADLLFSNTDILSSPVIASLWVKGNSGSASGRIMGVAFADTSVRTLGLSE 187
Query: 172 FLD-DSHFTNVESALVALGCKECLLPT--------EAVKSSECKTLRDALTRCGVMLTER 222
F + + + N ES ++ LG KE ++ T ++ +++E + L + L RCGV++TER
Sbjct: 188 FPEQEDGWGNTESLIIQLGIKEAIIATPTSTKNTSDSSQNTEYQQLIEVLERCGVVVTER 247
Query: 223 KKTEFKTRDLVQDLDRLVRGSVEPVRDLVS--GFEI--APGALGALLSYAELLSDESNYG 278
K+ EF +++ QD++RL+ G R L + FE+ A AL LL+Y +L D SN+
Sbjct: 248 KRAEFTLKNVEQDINRLLSGD----RQLAALPQFEMKTALAALNPLLNYLAILDDPSNHS 303
Query: 279 NYYIRKYSLDSYMRLDSAAMRALNVLESKTD---ANKNFSLFGLMNRTCTAGMGKRLLHM 335
Y + L +MRLD++A+RAL++ + T KN SLFGL+NR C G G RLL
Sbjct: 304 AYKFITHDLGQFMRLDASAVRALHLFPNPTSIGGGGKNMSLFGLLNR-CKTGQGTRLLGR 362
Query: 336 WLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQI 394
WLKQPL++++EI R +V D LRQ L+ HLK + D+ R+ + L+ +
Sbjct: 363 WLKQPLVNLHEIEQRQTLVGIMFQDGLLRQTLQDDHLKAMPDLTRISKRFIQGAGSLEDV 422
Query: 395 VKLYQSSIRLPYIRSALQQYEG-------QFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
V++YQ+ ++LP I AL + +G + L+ Y P + + L +++ +VE
Sbjct: 423 VRVYQAVVKLPEILEALDKADGFETGNSEEAKELLNVIYRLPFQECVTN--LAQYVEMVE 480
Query: 448 TSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD-KALKLD 506
T+VDLD+LEN +++I +D L LKN + Q+ H + A DL + D K L +
Sbjct: 481 TTVDLDELENHQFIIKPDFDDDLRELKNALDQNREQLDEEHLRVAQDLGMGTDSKVLHFE 540
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
+G+VFR+T+KE IR K T +I L R +G FT LK+L ++ + + ++Y+
Sbjct: 541 NHQVYGYVFRLTRKEAGVIRSKKT--YIELSNRNNGCHFTTKTLKELNNELKDLTQKYQR 598
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI 626
Q LV V+ A ++ I + L +++ LD+++SFA ++ + P YT P + GD+
Sbjct: 599 KQSSLVKEVVSIAASYCPILEKLNEIIAHLDLIVSFAHVSLNAPMTYTCPKMYALGEGDV 658
Query: 627 ILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
L+G RHPC+E QD +NFIPND + R +S F IITGPNMGGKST+IRQ+GV LMAQ+G
Sbjct: 659 CLKGCRHPCLEVQDDINFIPNDTLMERERSSFHIITGPNMGGKSTYIRQIGVAALMAQLG 718
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
+VPC AS+ V D I ARVGAGD Q +G+STFM EMLETA ILK AT SLIIIDELGR
Sbjct: 719 CYVPCAEASLPVFDSILARVGAGDSQTKGISTFMAEMLETAVILKSATPNSLIIIDELGR 778
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDGFGLAWAI EH+ EI+A TLFATHFHELT L KQ+ V NYHV
Sbjct: 779 GTSTYDGFGLAWAISEHIAVEIKAFTLFATHFHELTTL---------DKQVEHVKNYHVV 829
Query: 807 AHIDS------TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
AH++ +S +T+LYKVEPG DQSFGIHVAE ANFPE V+ LAR KA
Sbjct: 830 AHVEKKSAAGVSSSDITLLYKVEPGFSDQSFGIHVAEMANFPEDVLKLARRKA 882
>gi|194387494|dbj|BAG60111.1| unnamed protein product [Homo sapiens]
Length = 865
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 342/780 (43%), Positives = 492/780 (63%), Gaps = 35/780 (4%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
+G+GYVD +R LGL EF D+ F+N+E+ L+ +G KEC+LP + + LR + R
Sbjct: 92 VGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKECVLPG-GETAGDMGKLRQIIQR 150
Query: 215 CGVMLTERKKTEFKTRDLVQDLDRLVRG--------SVEPVRDLVSGFEIAPGALGALLS 266
G+++TERKK +F T+D+ QDL+RL++G +V P + ++A +L A++
Sbjct: 151 GGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEME----NQVAVSSLSAVIK 206
Query: 267 YAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE-SKTDANKNFSLFGLMNRTCT 325
+ ELLSD+SN+G + + + YM+LD AA+RALN+ + S D + SL L+N+ C
Sbjct: 207 FLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNK-CK 265
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL-KRISDIERLMHNL 384
G+RL++ W+KQPL+D N I RL++V+AFV+D L Q L++ L +R D+ RL
Sbjct: 266 TPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELSQTLQEDLLRRFPDLNRLAKKF 325
Query: 385 EKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIA 444
+++ A LQ +LYQ +LP + AL+++EG+ L+ + PL L D +KF
Sbjct: 326 QRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFATPLTDLRSD--FSKFQE 383
Query: 445 LVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALK 504
++ET++D+DQ+EN E+++ S+D LS L+ LE+++ S A DL L K +K
Sbjct: 384 MIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIK 443
Query: 505 LDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEY 564
LD QFG+ FR+T KEE +R F ++ +K+GVKFTN+KL L ++Y K EY
Sbjct: 444 LDSSAQFGYYFRVTCKEEKVLRN--NKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEY 501
Query: 565 KNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG 624
+ Q +V ++ + + E ++L +L++LD ++SFA +++ P PY RP I G
Sbjct: 502 EEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQG 561
Query: 625 DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
IIL+ SRH CVE QD + FIPND + K F IITGPNMGGKST+IRQ GV +LMAQ
Sbjct: 562 RIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQ 621
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETASIL+ AT SLIIIDEL
Sbjct: 622 IGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDEL 681
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDGFGLAWAI E++ +I A +FATHFHELTALA+ Q+ V N H
Sbjct: 682 GRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN---------QIPTVNNLH 732
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
V+A +T LTMLY+V+ G CDQSFGIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 733 VTAL--TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGE 790
Query: 865 ISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+E +K+ + + +G +FL + MP M + ++K++K ++
Sbjct: 791 SQGYDIMEPAAKKCYL----EREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 846
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LRLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSV 78
G+ L SV
Sbjct: 69 PAGAKNLQSV 78
>gi|336388191|gb|EGO29335.1| hypothetical protein SERLADRAFT_433333 [Serpula lacrymans var.
lacrymans S7.9]
Length = 904
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 340/786 (43%), Positives = 495/786 (62%), Gaps = 50/786 (6%)
Query: 108 GSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVAL----FPNFRENGCTIGLGYVDLT 163
S + L K +PGNL + ED+LF N+++ P+++A+ + T+G+ + D +
Sbjct: 55 ASKFVLEKEASPGNLQAVEDLLFVNSDILSAPIVMAIKIVSASADKTKTKTVGIAFADTS 114
Query: 164 KRVLGLAEFLDDSHFTNVE--SALVALGCKECLLPTEAVKSS-----ECKTLRDALTRCG 216
R LG+A+F+D+ F+N E S ++ L KE L+PT + + L+ L RCG
Sbjct: 115 IRQLGVADFVDNDLFSNTEIKSLIIQLSVKEALIPTGTASGNTDRDIDLNKLKAVLERCG 174
Query: 217 VMLTERKKTEFKTRDLVQDLDRLVR---------GSVEPVRDLVSGFEIAPGALGALLSY 267
V++TE+K +EF +++ DL +L+ G+ + + L +AP AL AL++Y
Sbjct: 175 VVITEKKPSEFTAKNIEDDLMKLLVQDPGSSATVGNPQTISQL--SLPVAPSALSALVNY 232
Query: 268 AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA---NKNFSLFGLMNRTC 324
LL+D SN+G + IR + L YMRLD++A+RALN+ E A N+N +L GL+N+ C
Sbjct: 233 LSLLTDPSNHGAFSIRTHDLSQYMRLDASALRALNLTEPPGSAGSINRNATLLGLLNK-C 291
Query: 325 TAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHN 383
G RLL WLKQPL++++EI R ++V+ FVDD++ R++L+ LK + D+ R+
Sbjct: 292 KTAQGTRLLGSWLKQPLVNLHEIQKRQNLVEMFVDDSSTRRNLQDDFLKFMPDMHRISKR 351
Query: 384 LEKRRAGLQQIVKLYQSSIRLPYIRSAL---QQYEGQFSSLIKERYLDPLESLTDDDHLN 440
+K A L+ +V++YQ +++P + + L Q + + SL++E YL +++L
Sbjct: 352 FKKSAASLEDVVRVYQVVLKIPGLIANLEGTQTEQDDYKSLLEEIYLKDFREF--NENLC 409
Query: 441 KFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD 500
K+ +VE ++DLD+L+N +Y+I YD L L N+ + + H++ +DLDL +D
Sbjct: 410 KYGEMVEQTLDLDELDNHKYVIKPDYDPRLQELANKLIEIRDGLDQEHREVGNDLDLELD 469
Query: 501 KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKV 560
K L L+ +G+ FR+TK + + K ++I L T K GV FT LK+L YQ+
Sbjct: 470 KKLHLENSQNYGYCFRLTKNDAKAVINK--RKYIELGTVKSGVFFTTKTLKELAGDYQET 527
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
+ Y Q LV V+ A T++ + ++L +++ LDV+LSFA ++ + P PY +P +
Sbjct: 528 TDTYSRTQSGLVKEVVNIAATYTPVLEALDHVIAHLDVILSFAHVSVNAPEPYVKPVMLE 587
Query: 621 PDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
G++IL+ +RHPC+E QD ++FIPND ++I+ +S FQIITGPNMGGKST+IRQVGV
Sbjct: 588 KGTGNLILKEARHPCLEVQDDISFIPNDVEMIKDESEFQIITGPNMGGKSTYIRQVGVIA 647
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
LMAQ G FVPC A + + D + RVGAGD QL+GVSTFM EMLETA+ILK AT SLII
Sbjct: 648 LMAQTGCFVPCSEAHVPIFDSVLCRVGAGDSQLKGVSTFMAEMLETATILKSATKDSLII 707
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
IDELGRGTSTYDGFGLAWAI EH+ +IRA LFATHFHELTAL E + V
Sbjct: 708 IDELGRGTSTYDGFGLAWAISEHIASQIRAFCLFATHFHELTALDQE---------LSHV 758
Query: 801 ANYHVSAHID-------STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
N HV AH+ S ++ +T+LYKVEPG DQSFGIHVA+ ANFPE+VV LA+ KA
Sbjct: 759 KNLHVVAHVTQGDDEVASLNQDITLLYKVEPGVSDQSFGIHVAKLANFPENVVKLAKRKA 818
Query: 854 AELEDF 859
ELEDF
Sbjct: 819 DELEDF 824
>gi|367031938|ref|XP_003665252.1| hypothetical protein MYCTH_2308779 [Myceliophthora thermophila ATCC
42464]
gi|347012523|gb|AEO60007.1| hypothetical protein MYCTH_2308779 [Myceliophthora thermophila ATCC
42464]
Length = 873
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 348/780 (44%), Positives = 488/780 (62%), Gaps = 52/780 (6%)
Query: 110 NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLGYVDLTKRVLG 168
NW++VK +PGNL E+ L + +E P+I+A+ + + + ++G+ + D + R LG
Sbjct: 32 NWKIVKQASPGNLQDVEEDLGSLSEA--APIILAVKISTKASEARSVGVCFADASVRELG 89
Query: 169 LAEFLDDSHFTNVESALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKT 225
++EFLD+ ++N E+ L+ LG KECL+ E K E LR + CG+ ++ER
Sbjct: 90 VSEFLDNDLYSNFEALLIQLGVKECLIHMEKADKEKDPELAKLRQIIDNCGIAISERPAA 149
Query: 226 EFKTRDLVQDLDRLVR----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYY 281
+F T+D+ QDL RL++ ++ P DL ++A GA AL+ Y +L D SN+G Y
Sbjct: 150 DFGTKDIEQDLARLLKDERSATLLPQTDL----KLAMGAASALIKYLGVLHDPSNFGQYQ 205
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ ++ L +M+LD+AA++ALN++ S D K SLFGL+N C +G RLL WLKQPL
Sbjct: 206 LYQHDLAQFMKLDAAALKALNLMPSARDGAKTMSLFGLLNH-CRTPLGSRLLAQWLKQPL 264
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQS 400
+D +EI R +V+AFV+DT LRQ +++ HL+ I D+ RL ++++A L+ +V++YQ
Sbjct: 265 MDKSEIEKRQQLVEAFVNDTELRQTMQEEHLRAIPDLYRLAKRFQRKKANLEDVVRVYQV 324
Query: 401 SIRLPYIRSALQQYEGQFSSLIKERYLDPL-ESLTDD-----DHLNKFIALVETSVDLDQ 454
+IRLP + G ++ E Y DPL E+ T+ D L K +VET+VDLD
Sbjct: 325 AIRLP-------GFLGTLEGVMDETYRDPLDEAYTNQLRGLSDSLAKLQEMVETTVDLDA 377
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
L+N E++I +D L ++ + + L ++ ASDL DK + L+ G
Sbjct: 378 LDNHEFIIKPEFDDSLRIIRKKLDKLRTDMNREFADVASDLGQERDKKIFLENHKVHGWC 437
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
R+T+ E IR K ++++ T+K+GV FT L+ ++ ++ + Y Q LVN
Sbjct: 438 MRLTRTEAGCIRNK--SRYMECSTQKNGVYFTTKTLQGYRREFDQLSQTYNRTQSGLVNE 495
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
V+ A +++ + + LA +L+ LDV++SFA + P Y RP I+P G IL +RHP
Sbjct: 496 VVGVAASYTPVLERLAGILAHLDVIVSFAHCSVHAPISYVRPKIHPRGEGQTILTEARHP 555
Query: 635 CVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
C+E QD V FI ND +L R KS F +ITGPNMGGKST+IRQ+GV LMAQ+G FVPC A
Sbjct: 556 CLEMQDDVQFITNDVELTRDKSSFLVITGPNMGGKSTYIRQIGVIALMAQIGCFVPCSTA 615
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+++ D I ARVGA D QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGTSTYDGF
Sbjct: 616 ELTIFDSILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGF 675
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI---DS 811
GLAWAI EH+V+EI LFATHFHELTALA Q V N HV+AHI DS
Sbjct: 676 GLAWAISEHIVKEIGCFALFATHFHELTALA---------DQYPQVRNLHVTAHISGTDS 726
Query: 812 TS---------RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
+S R++T+LYKVEPG CDQSFGIHVAE FP+ VV +A+ KA ELEDFT +
Sbjct: 727 SSSKKKTGTEKREVTLLYKVEPGVCDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTSA 786
>gi|406604110|emb|CCH44419.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 929
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 370/939 (39%), Positives = 565/939 (60%), Gaps = 48/939 (5%)
Query: 9 PELKL-DAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D R F ++ LP + +R D+ DY+ A +NA FIA+ YHT + L+
Sbjct: 5 PELKFSDTTDERSFYRKFQNLPAQPEQTLRIVDKTDYFIAVSQNAKFIAEQIYHTNSVLK 64
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYE 126
++ + V++S + + LLE+ + +E+Y+ NW L K +PGN+ S E
Sbjct: 65 ----NNNGVEYVTMSHAVMSNLLSMALLEK-GYKIEIYD---KNWELTKFASPGNIESVE 116
Query: 127 DVLFAN--NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
D++ + N+ D V+V+L + G +IG +++ + +G++EFLD+ ++N+ES
Sbjct: 117 DLMNPSELNQSGDALVLVSLKIVNKNEGKSIGYCFINSNIKEIGISEFLDNDLYSNLESL 176
Query: 185 LVALGCKECLLPTEAVK-SSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
L+ + KE L+PT + + + L + RCG ++TE + +F +D+ QDL RL+
Sbjct: 177 LIQIDAKEVLIPTPSNELDPDYTKLIGVIDRCGAVVTEIRSNDFNNKDIEQDLIRLLGDE 236
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
+ +S + + A+L+Y LL+D+SN+G++ ++ ++L+ +M+LDSAA++ALN+
Sbjct: 237 LIFSTGDISNASLGLSSASAILNYLGLLTDDSNFGSFNLKNHTLNQFMKLDSAAVKALNL 296
Query: 304 LESK--TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDT 361
S T+ +KN ++F L+N C + G RLLH W+KQPL++++EI R +V V+DT
Sbjct: 297 FPSSKSTNGSKNSNVFDLLNH-CKSIGGTRLLHQWIKQPLIEIDEILQRHQLVGCLVEDT 355
Query: 362 ALRQDLRQHL-KRISDIERLMHNLEKR-RAGLQQIVKLYQSSIRLPYI----RSALQQYE 415
LR L L I DI +L L K A L+ +V++YQ I++P I S + + E
Sbjct: 356 QLRTSLHDDLMNSIPDIRKLNKKLNKSIYANLEDVVRIYQFLIKIPEILELLESKINETE 415
Query: 416 G-QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+ LI+ ++ PL+ L + L K LVET+VDL+ L+ E++I YD L +
Sbjct: 416 SLELKGLIELHWVSPLKELMNP--LLKLQELVETTVDLENLDRHEFVIKPDYDEILLKYR 473
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ +E I S+H A +L L +K LKL+ G R+T+ EE IR K ++FI
Sbjct: 474 ERLDEIESTIRSIHADVADELGLDPEKKLKLELHQNHGWCMRLTRTEERSIRGK--SKFI 531
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
L+T K GV FT ++K + + ++ +Y Q+ LV +I T+S + + L+ +LS
Sbjct: 532 ELQTVKAGVFFTTEEMKDISLESSEIQAKYNKQQRSLVKEIISITATYSPVLEKLSLILS 591
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDV--GDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
LDVL SFA ++S P PY +P + P + G I++ +RHPCVE QD V FI ND +L+
Sbjct: 592 HLDVLTSFAHVSSYAPVPYIKPKMYPLNSTEGKTIVKEARHPCVEMQDGVTFIANDVELV 651
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
+ ++ F IITGPNMGGKST+IRQ+G L+AQ+G FVP A + V D I ARVGAGD Q
Sbjct: 652 KNETEFLIITGPNMGGKSTYIRQIGTISLIAQIGCFVPATEAELCVFDAILARVGAGDSQ 711
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETASIL+ A+ SLIIIDELGRGTSTYDGFGLAWAI E + ++ T
Sbjct: 712 LKGVSTFMMEMLETASILQTASSNSLIIIDELGRGTSTYDGFGLAWAISEFIATKLNCFT 771
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS---TSRKLTMLYKVEPGACDQ 829
+FATHFHELT L+ ++ V N HV AH++S TS +T+LYKVEPG DQ
Sbjct: 772 IFATHFHELTKLS---------DKLNKVKNLHVVAHVESNSNTSSDITLLYKVEPGISDQ 822
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG 889
SFGIHVAE FP +V++A+ KAAELE++ + D +E KR + S +++S+G
Sbjct: 823 SFGIHVAEVVKFPGKIVSMAKRKAAELEEYNDN---KQDPYVE--DKRTKCSS-DEISQG 876
Query: 890 AARAHQFLKEF-SDMPLETMDLKEALERVKRMKDDLEKD 927
+ + LKE+ + + E + ++A+ ++K + +D KD
Sbjct: 877 SELLKKILKEWRNSIDFEKISSEDAVNKLKELVNDQYKD 915
>gi|167536501|ref|XP_001749922.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771637|gb|EDQ85301.1| predicted protein [Monosiga brevicollis MX1]
Length = 878
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 354/914 (38%), Positives = 539/914 (58%), Gaps = 65/914 (7%)
Query: 20 GFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV 78
GF + Y+ LP +RFFDR DYYT HG++A + AK + + L+ G + L S
Sbjct: 5 GFCAAYERLPAKPATCIRFFDRGDYYTLHGDDALYAAKNIFKSQGVLKYYG--AKKLPSC 62
Query: 79 SVSKNMFETIARDLLLERTDHTLELYEGSGSN--WRLVKSGTPGNLGSYEDVLFANNEMQ 136
S+++ +FET RDLLL+R + +E++ SG + W + K +PGN +++D+L+ N+++
Sbjct: 63 SMNQMLFETTIRDLLLQRR-YRVEVFSSSGKSHQWAVTKKASPGNTQAFQDILY-NSDLV 120
Query: 137 DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLP 196
+ +++A+ N +G+ + D + G+ +F D + F N E+ LV +G KE LLP
Sbjct: 121 QSSIVLAVTLQGSGNDQLVGVAFCDTAQASFGVCQFPDTAQFNNFEALLVQVGPKEVLLP 180
Query: 197 TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFE- 255
+E K L R G M+T R+K +++ +D+VQDL+RL++ + + + +
Sbjct: 181 SEQNNPLITK-LSQISERYGAMVTPRRKADYQAKDVVQDLERLLKLAQDQKAAALPQVDE 239
Query: 256 -IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
A AL ++ Y +LL+D++N + + ++ YMRLDSAAMRALNV + + K+
Sbjct: 240 KAAMAALCCVIHYLDLLADDANTNKFRLSTFNFTQYMRLDSAAMRALNVFPAGPHSTKSH 299
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SLFGL+N C G+RLL+ WLKQPLLDVN I R DL LK++
Sbjct: 300 SLFGLLNH-CKTLQGQRLLYQWLKQPLLDVNRIRER--------------HDLETALKKM 344
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
D+ RL ++RA LQ +V +Y + RLP + LQ +EG ++L+ +++L+ +L
Sbjct: 345 PDLSRLSKKFARQRARLQDVVSVYMAVKRLPDLIEHLQDFEGTHATLLHKQFLEDFTTLF 404
Query: 435 DDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
+D K++ LVE ++DL+Q ++ Y I +++ + + +++E +I S ++ A D
Sbjct: 405 ED--FEKYLELVERTIDLEQADHQNYFIKPTFNEDMQKTREAIDTIEEEITSACEEAAED 462
Query: 495 LDLPVDKALKLDKGTQFG-HVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
L+L K+LK ++ + ++FR+T+ + +R + +ET+K+G+KFTN +L +L
Sbjct: 463 LNLEYGKSLKCEQDAKSKQYLFRVTRAYDKLLRN--NKAYTTIETQKNGIKFTNKRLSRL 520
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
+ Q + Y Q E+ +VI A + E + L +++ LDV LS A + P PY
Sbjct: 521 NEARQAQHDRYAEIQAEVAAKVIGIASGYEEPMEELNAVIAVLDVFLSLATASLRAPVPY 580
Query: 614 TRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
RP ++ G+I L+ RHPC+E QD + FIPND L R FQIITGPNMGGKST+I
Sbjct: 581 VRPVMHAMGEGNITLKACRHPCLEVQDELAFIPNDVDLRREDGEFQIITGPNMGGKSTYI 640
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQ+G+ +LMAQ+G FVP + A I+V D + A RG+STFM EMLETASIL A
Sbjct: 641 RQIGMAVLMAQIGCFVPANTAEIAVVDAVLA---------RGISTFMAEMLETASILSAA 691
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFN 793
+ SLII+DELGRGTSTYDGFGLAWAI EH+ + I A LFATHFHELTALA E
Sbjct: 692 SRNSLIIVDELGRGTSTYDGFGLAWAISEHIAKTIGAFCLFATHFHELTALADE------ 745
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
+ V N HV A +++ +LT+LYKV+PG CDQSFGIHVAE +FP +V+ A+ KA
Sbjct: 746 ---LPSVVNLHVDAL--TSNNELTLLYKVKPGVCDQSFGIHVAEMVHFPAAVIEDAKRKA 800
Query: 854 AELEDFTPSAVISDDAKIEVGS---KRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDL 910
AELEDF + E+GS K+ ++ + G F+ + + E +
Sbjct: 801 AELEDFENTG--------ELGSTPDKKAKL----EQREGEQLLSTFVDQVRSIQAEGLTP 848
Query: 911 KEALERVKRMKDDL 924
++A E+V ++D L
Sbjct: 849 EQAFEKVAALRDKL 862
>gi|322785419|gb|EFZ12092.1| hypothetical protein SINV_12798 [Solenopsis invicta]
Length = 895
Score = 627 bits (1616), Expect = e-176, Method: Compositional matrix adjust.
Identities = 360/906 (39%), Positives = 527/906 (58%), Gaps = 48/906 (5%)
Query: 35 VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLL 94
+RFF+R DYYT HG +A F A+ + TT+ + +G V ++K+ FET RDLLL
Sbjct: 7 IRFFNRSDYYTVHGSDALFAAQEIFKTTSVCKMIGAEPHKTEGVILNKSHFETFVRDLLL 66
Query: 95 ERTDHTLELYEGSGS----NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRE 150
+ + +E+Y GS NW L G+PGNL +ED+LF NN++ ++A+
Sbjct: 67 VK-QYRVEVYVNQGSSKNQNWILEYKGSPGNLSHFEDILFGNNDVAVGVSVIAVKLGTEG 125
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GL VD+ ++ + EF D+ F+N+E+ +V L KECLL + S E +TL+
Sbjct: 126 KSRVVGLSCVDVVSTLISVTEFQDNESFSNLEALIVTLAPKECLL-IQGEGSYEFQTLKQ 184
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVR---GSVEPVRDLVS-GFEIAPGALGALLS 266
+ R VM+T RKKTEF + ++ DL+ L++ G + + L +A A AL+
Sbjct: 185 LIERSNVMVTLRKKTEFASDSIIDDLNTLIKFKKGQKQNAQSLPEVNLNLAMSATSALIK 244
Query: 267 YAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF------SLFGLM 320
Y +L SDE + + + + Y+RLDSAA+RALN+ E + DA N S+ L+
Sbjct: 245 YLDLTSDEGHLNQFKLNQIEQSRYIRLDSAAIRALNI-EPQADAISNLHGNPVSSILTLL 303
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIER 379
++ C G RL+ W++QPL D++ I R DIV+ V + LR L +LKRI D+++
Sbjct: 304 DK-CRTAQGHRLIAQWVRQPLRDLSLIKERHDIVELLVQNNELRSILSDDYLKRIPDLQQ 362
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L L ++++ LQ K+Y LP + L Q E + +K +DPL+ L +D +
Sbjct: 363 LAKKLARKKSVLQDCYKIYLCVSYLPKLLEQLSQEEN--VTALKTMIIDPLKELVND--M 418
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
+KF LVE ++DLD E GE+M++ + L LK+ E I + A+DL L
Sbjct: 419 DKFQQLVEQTIDLDAAEKGEFMVNPGFADDLKVLKDAMTETEETIQQQLNKAANDLCLEA 478
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
K +KL+ QFG+ FRIT KEE +R K + +L++ K G++F N +L +L D +
Sbjct: 479 GKVIKLENNQQFGYYFRITLKEEKILRNK--KHYTILDSNKAGIRFRNNRLNELNDDFTD 536
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+Y QK+++ ++ A +S +++ +L+ DVL SFA A S Y RP +
Sbjct: 537 ARNKYMERQKDVITEIVGIAAGYSGTVRAIGDVLACFDVLTSFASAAISANKMYVRPKMV 596
Query: 620 PPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
+ G++ L RHPC+E Q V++I ND R + F IITGPNMGGKST+IR VGV
Sbjct: 597 SSEEGELNLTQVRHPCLEMQQGVDYIANDIDFKRDQYRFCIITGPNMGGKSTYIRSVGVA 656
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
LMA +GSFVPCD+A+IS+ DCI RVGA D QL+G+STFM EM+E A+ILK AT SL+
Sbjct: 657 ALMAHIGSFVPCDKATISLLDCILTRVGADDSQLKGLSTFMMEMIEIAAILKTATCNSLV 716
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
IIDELGRGTSTY+G G+AW+I EHL +I++ LFATHFHE+T LA E +
Sbjct: 717 IIDELGRGTSTYEGCGIAWSIAEHLARDIKSYCLFATHFHEITKLAEE---------IPI 767
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
V N HV+A ++ KLT+LY+V+PG CDQSFG+HVA+ ANFP V+ A+ K AELE++
Sbjct: 768 VKNQHVTALVEDD--KLTLLYQVKPGICDQSFGLHVAKMANFPLDVIEFAKRKQAELENY 825
Query: 860 TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALE-RVK 918
A D K+++I + G QFL + D+ D ALE +V
Sbjct: 826 EGIAFEGSDNP----QKKRKI-----IQEGEILISQFLTKCKDLDQSLPD--TALESQVS 874
Query: 919 RMKDDL 924
+K+D+
Sbjct: 875 SLKEDI 880
>gi|307184088|gb|EFN70623.1| DNA mismatch repair protein Msh2 [Camponotus floridanus]
Length = 895
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 355/905 (39%), Positives = 534/905 (59%), Gaps = 45/905 (4%)
Query: 35 VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLL 94
+RFF+R DYYT HG +A F A+ + TT+ + +G V ++K FET RDLLL
Sbjct: 6 IRFFNRSDYYTLHGSDALFAAQEVFKTTSVCKMIGAEPHKTEGVILNKGHFETFVRDLLL 65
Query: 95 ERTDHTLELYEGSGS----NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRE 150
+ + +E+Y GS NW L G+PGNL +ED+LF NN++ ++A+
Sbjct: 66 VK-QYRVEVYVNQGSSKNQNWVLEHKGSPGNLSHFEDILFGNNDIAVGVSVIAVKLGTEG 124
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GL VD+ ++ + EF D+ F+N+ES +V L KECLL + S E +TL+
Sbjct: 125 KSRVVGLSCVDVVSTLILVGEFQDNESFSNLESLIVTLAPKECLL-IQGEGSYEFQTLKQ 183
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVR---GSVEPVRDLVS-GFEIAPGALGALLS 266
+ R VM+T RK+ EF + ++ DL+ L++ G + + L +A A AL+
Sbjct: 184 LIERNNVMVTLRKRNEFSSDSIIDDLNTLIKFKKGQKQNAQSLPEVNLNLAMSATSALIK 243
Query: 267 YAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF------SLFGLM 320
Y +L SDE + + +++ Y+RLDSAA++ALN+ E + D N S+ L+
Sbjct: 244 YLDLTSDEGHMNQFSLKQVEQSRYIRLDSAAIKALNI-EPQIDGVSNLHGNPAASVLTLL 302
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIER 379
++ C G RL+ W++QPL D++ I R DIV+ V++ LR L +LKRI D+++
Sbjct: 303 DK-CRTAQGHRLIAQWVRQPLRDLSLIKERHDIVELLVNNNELRSILNDDYLKRIPDLQQ 361
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L L ++++ LQ K+Y LP + L E ++L K +DPL+ L +D +
Sbjct: 362 LAKKLARKKSALQDCYKIYLCVSYLPKLLEQLLP-EANMTAL-KAMIIDPLKELIED--M 417
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
+KF LVE ++DLD E G++M++ + LK+ + E +I + A DL +
Sbjct: 418 DKFQQLVEQTIDLDAAEKGDFMVNPGFADDFKELKDAMDETEERIQRQLGKAADDLGMEA 477
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
K LKL+ Q G+ FRIT KEE +R ++ +L++ K GV+F N+KL +L D++
Sbjct: 478 GKTLKLESNQQLGYYFRITLKEEKILRN--NKRYTILDSNKAGVRFRNSKLSELNDEFIV 535
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+Y QK+++ ++ A +SE +++ +L+ LDVL +FA A S Y RP++
Sbjct: 536 ARNKYLERQKDVITEIMGIAAGYSETVRTIGGVLACLDVLTAFASAAISANKVYVRPEMV 595
Query: 620 PPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
P + G++ L RHPC+E Q V++I ND R + F IITGPNMGGKST+IR VGV
Sbjct: 596 PSEEGELNLIQVRHPCLEMQQGVDYIANDINFKRDQYHFCIITGPNMGGKSTYIRSVGVA 655
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
LMA +GSFVPCD+A+IS+ DCI AR+GA D QL+G+STFM EM+ETA+ILK AT SL+
Sbjct: 656 ALMAHIGSFVPCDKATISLLDCILARIGADDSQLKGLSTFMTEMIETAAILKTATCNSLV 715
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
IIDELGRGTSTY+G G+AW+I EHL ++IR+ LFATHFHE+T LA E +
Sbjct: 716 IIDELGRGTSTYEGCGIAWSIAEHLAKDIRSYCLFATHFHEITRLAEE---------VPT 766
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
+ N+HV+A ++ KLT+LY V+PG CDQSFG+HVA+ ANFP V+ A+ K AELED+
Sbjct: 767 IQNHHVTALVEDN--KLTLLYTVKPGICDQSFGLHVAKMANFPPDVIEFAKRKQAELEDY 824
Query: 860 TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKR 919
+V+ + + KRK I + + QF K+ + L ++ + +V
Sbjct: 825 --QSVVFEGSN-NSHKKRKIIQEAETL------ISQFFKKCKTLALTSLSDADLENKVLV 875
Query: 920 MKDDL 924
K+D+
Sbjct: 876 FKEDI 880
>gi|154309887|ref|XP_001554276.1| hypothetical protein BC1G_06864 [Botryotinia fuckeliana B05.10]
Length = 833
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 338/782 (43%), Positives = 488/782 (62%), Gaps = 45/782 (5%)
Query: 101 LELYEGSG-SNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGC-TIGLG 158
+E++ SG +NW++ K+ +PGNL E+ L P+I+A+ + + + IG+
Sbjct: 5 VEIFTTSGRNNWKVTKTASPGNLQDVEEEL--GGSFDAAPIILAVKVSAKASEARNIGVC 62
Query: 159 YVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTE-AVKSSECKTLRDALTRCGV 217
+ D + R LG++EFLD+ ++N ES L+ LG KECL+ + K E + L+ + CG
Sbjct: 63 FADASVRELGVSEFLDNDLYSNFESLLIQLGVKECLIQVDRTTKDVELQKLKQIIENCGC 122
Query: 218 MLTERKKTEFKTRDLVQDLDRLVRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
TER F T+D+ QDL RL++ V P DL ++A G+ AL++Y +L D
Sbjct: 123 AWTERAGGTFGTKDIEQDLARLLKDEKSTGVIPQTDL----KLAMGSAAALINYLGVLHD 178
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
SN+G Y + ++ L +M+LD++A++ALN++ D +K SL+GL+N C +G RLL
Sbjct: 179 NSNFGQYQLYQHDLSQFMKLDASALKALNLMPGPRDGSKTMSLYGLLNH-CKTPVGSRLL 237
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQ 392
WLKQPL+ + EI R +V+AFV+D L+Q +++ H++ I D+ RL +K+ A L+
Sbjct: 238 AQWLKQPLMSLEEIEKRQQLVEAFVEDQELKQTIQETHMRSIPDLYRLAKRFQKKLANLE 297
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL-ESLTD-----DDHLNKFIALV 446
+V+ YQ IR+P + L+ ++ E+Y D L E+ TD + L +V
Sbjct: 298 DVVRAYQVVIRIPDLIKTLE-------DVMDEKYRDALDEAYTDKLRGCNVSLGNLAEMV 350
Query: 447 ETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
ET+VDL+ ++N EY+I +D L+ ++ + + L+ ++ + A DL ++K + L+
Sbjct: 351 ETTVDLEAMDNHEYIIKPEFDDSLNIIRRKLDKLKYEMDQEFRIVAKDLGQEIEKKIFLE 410
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ E IR K +++ +T+K+GV FT +KL + ++ ++ E Y
Sbjct: 411 NNKVHGWCMRLTRTEASCIRNK--SKYQECQTQKNGVYFTTSKLLSIRREFDQLSENYNR 468
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI 626
Q LVN V+ TA ++ + + LA++L+ LDV++S A ++ PT Y RP ++P G
Sbjct: 469 TQSSLVNEVVATAASYCPVIEQLASVLAHLDVIVSLAHTSAHAPTSYVRPKMHPRGTGST 528
Query: 627 ILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
IL+ +RHPC+E QD V FI ND LIR +S F IITGPNMGGKST+IRQ+GV LMAQ+G
Sbjct: 529 ILKEARHPCMEMQDDVQFITNDVSLIRDESSFLIITGPNMGGKSTYIRQIGVIALMAQIG 588
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
FVPC A +++ DCI ARVGA D QL+GVSTFM EMLETA+ILK AT SLIIIDELGR
Sbjct: 589 CFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDELGR 648
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDGFGLAWAI E++V EI A ++FATHFHELTALA V N HV
Sbjct: 649 GTSTYDGFGLAWAISEYIVREIGAFSMFATHFHELTALA---------DTFPQVKNLHVV 699
Query: 807 AHIDST------SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
AHID+ R++T+LYKVE G CDQSFGIHVAE FPE V+ +AR KA ELEDF
Sbjct: 700 AHIDTEPSSQERKREVTLLYKVEEGICDQSFGIHVAELVKFPEKVIGMARRKAEELEDFG 759
Query: 861 PS 862
S
Sbjct: 760 TS 761
>gi|444315884|ref|XP_004178599.1| hypothetical protein TBLA_0B02380 [Tetrapisispora blattae CBS 6284]
gi|387511639|emb|CCH59080.1| hypothetical protein TBLA_0B02380 [Tetrapisispora blattae CBS 6284]
Length = 959
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 369/911 (40%), Positives = 535/911 (58%), Gaps = 70/911 (7%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + RGF + +LP T+ +R DR DYY+A GE+A FI++ YHT + L+
Sbjct: 6 PELKFSDISEERGFYRRFLSLPEKTQGTLRIVDRGDYYSAVGEDAVFISENIYHTQSVLK 65
Query: 67 QLGTGSDALSS-------VSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
+ L S V++S + T+ + LL+ + +E+Y+ S W+L+K+ +P
Sbjct: 66 NANLDPNTLKSFHEPTKYVTMSLQIVGTLLKTALLD-MGYKIEIYDKS---WKLIKNASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ D++ N + DT +I+A N +E CTIG ++D T +G+ + LD+
Sbjct: 122 GNIEQVSDLM---NIVVDTSIIIASIKFQFNSQEGNCTIGTSFIDTTNFKIGMLDILDNE 178
Query: 177 HFTNVESALVALGCKECLLP----TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDL 232
++N+ES L+ LG +ECL+P E V S+E K + + + RCG ++T K +E+ +D+
Sbjct: 179 VYSNLESFLIQLGVRECLVPDLTNNENV-SAELKKITNVIDRCGAVVTFIKNSEYSNKDI 237
Query: 233 VQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +LV G + +A GA AL+ Y +LLS+E+ G Y I ++SL +M+
Sbjct: 238 ESDLTKLV-GDELSLALPKKHSSLALGASRALIHYLQLLSEENQIGKYDILEHSLKEFMK 296
Query: 293 LDSAAMRALNVLES---------------KTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
LD++A++A+N+ ++ K SLF L+N C G RLL+ WL
Sbjct: 297 LDASAIKAMNLFSQGPVQPFGPSLGNQLRTANSGKVTSLFQLLNH-CKTNAGSRLLNEWL 355
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVK 396
KQPL D++EI R D+V +D LRQ L+ +L I DI RL L K L+ ++K
Sbjct: 356 KQPLTDLSEILKRHDLVDYLIDQLELRQILQTDYLLGIPDIRRLAKKLNKN-GTLEDVLK 414
Query: 397 LYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+YQ S ++P I A + + E + L+K +L PL + D L KF ++ET+V
Sbjct: 415 VYQFSRKIPEITQAFESFLEDDSVEPKIKDLVKSEWLQPLTAHIDP--LTKFQEMIETTV 472
Query: 451 DLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
DL+ E N EYMI ++ L+ ++ + + L+ IH++H + A DL +K LKL+
Sbjct: 473 DLEVYEENNEYMIRVEFNEELARIRQKLDELKNDIHTIHLEAAEDLGFDPEKKLKLENHH 532
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
G R+T+ + ++RK +++ L T K G+ F+ +L+++ + + +EY Q
Sbjct: 533 LHGWCMRLTRTDAKELRKH--KKYLELSTVKAGIYFSTKELREIAGETSTLQKEYDRQQA 590
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD-IIL 628
LV ++ +T+S + L+ +L+ +DVL +FA ++S P PY RP ++ D L
Sbjct: 591 VLVKEIVNITLTYSPVLDRLSMVLANIDVLSAFAHVSSYAPIPYIRPTMHGFDSERRTYL 650
Query: 629 EGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
+ SRHP +E QD + FI ND L G S F IITGPNMGGKST+IRQVGV LMAQ+G F
Sbjct: 651 KNSRHPVIEMQDDITFISNDVDLNNGSSDFLIITGPNMGGKSTYIRQVGVITLMAQIGCF 710
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPC+ A I+V D I RVGAGD QL+GVSTFM EMLET+SILK AT SLII+DELGRGT
Sbjct: 711 VPCEEADIAVVDAILCRVGAGDSQLKGVSTFMIEMLETSSILKNATSNSLIIVDELGRGT 770
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
STYDGFGLAWAI EH+ +I LFATHFHELT+LA N V N HV AH
Sbjct: 771 STYDGFGLAWAIAEHIASKIGCFALFATHFHELTSLADNLPN---------VKNMHVVAH 821
Query: 809 ID------STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
I+ S S +T+LYKVEPG DQSFGIHVAE NFP+ ++ +A+ KA ELE+ +
Sbjct: 822 IEQGDESHSNSDDITLLYKVEPGISDQSFGIHVAEVVNFPQKIIKMAKRKATELEELKEN 881
Query: 863 AVISDDAKIEV 873
I AK+ V
Sbjct: 882 NEIIKKAKLTV 892
>gi|164655966|ref|XP_001729111.1| hypothetical protein MGL_3578 [Malassezia globosa CBS 7966]
gi|159103001|gb|EDP41897.1| hypothetical protein MGL_3578 [Malassezia globosa CBS 7966]
Length = 947
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 336/866 (38%), Positives = 520/866 (60%), Gaps = 44/866 (5%)
Query: 20 GFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD---AL 75
GF+SF++ LP VR F+R+D+Y A+G++A ++A T + T + LR LG S L
Sbjct: 22 GFISFFRNLPATVPGTVRLFNRQDFYAAYGDDALYVADTVFKTKSVLRYLGGKSREDIGL 81
Query: 76 SSVSVSKNMFETIARDLLLERTDHTLELY-----EGSG---SNWRLVKSGTPGNLGSYED 127
S S+S ++ RD L + +E++ +GSG S W + K +PGNL ED
Sbjct: 82 PSCSLSLTAAKSFLRDALTTK-QLRVEIWASTSGDGSGKRGSTWAIAKQASPGNLQELED 140
Query: 128 VLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVA 187
+LF +++ +P+++AL + +G + D T R G+AE+ + F+N ES ++
Sbjct: 141 LLFLQSDVVSSPIVLALRIKVEDGLNQVGAAFADATNREFGIAEYAETDLFSNSESLIIQ 200
Query: 188 LGCKECLLPT-EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEP 246
LG KEC+LPT EA + LR + RCG ++TE ++ F + + +D+ RL+ S +
Sbjct: 201 LGVKECVLPTDEAGSDYNLQKLRSMIERCGCVITEVRRGLFVNKSVEEDILRLLPSSQQA 260
Query: 247 VRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE- 305
++A + AL+SY LL DESN+G + + + L Y+R+D+AA+RALN+
Sbjct: 261 TLTSNLNKKLAMTSASALISYLNLLGDESNFGKFTLCSHDLSEYLRMDNAALRALNLFPD 320
Query: 306 ---SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
+ NK SLFGL+N C G R+L+ WLKQPL++++ I R ++ +DD
Sbjct: 321 PHGQASGTNKGASLFGLLNH-CKTAQGIRMLNQWLKQPLVNLHAIQNRQSMLSILLDDPE 379
Query: 363 LRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ---YEGQF 418
R L+ LK + D+ R+ ++ A L+ +V+ YQ+ I++P + L+
Sbjct: 380 ARHRLQDDFLKYMPDMLRIGKRFQRGVATLEDVVRCYQAVIKIPDLTQVLRSIAIVSEAD 439
Query: 419 SSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQE 478
+L ++ PL+ L HL K + +VE ++DLD+L+ Y+I +D L ++ + +
Sbjct: 440 CALFHSTFVAPLDELYQ--HLVKLVEMVEMTLDLDELQYHNYVIKPEFDETLRLIRTKLD 497
Query: 479 SLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLET 538
+ Q+ H Q DL L +K L L+ + +G+ FR+T+ + ++ + ++ L T
Sbjct: 498 VIRDQLDEQHIQVGHDLRLDTEKKLHLENHSSYGYCFRVTRTDAGVVKNR--NGYLDLST 555
Query: 539 RKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDV 598
K G+ FT +++L D+++ + E+Y + Q LV VI A +++ + L +++ LDV
Sbjct: 556 VKGGLYFTTPSVRELNDEFRSLSEDYASTQSRLVKDVIDIASSYTPPLEHLNVVVAHLDV 615
Query: 599 LLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWF 658
++S A ++S+ P PYTRP++ ++L SRHPC+E QD ++FIPND ++ +S F
Sbjct: 616 IVSLAHVSSNAPIPYTRPELRERG-SSLVLRDSRHPCLEVQDDIHFIPNDVSMVPNESEF 674
Query: 659 QIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGAGDCQLRGVS 717
++TGPNMGGKST++RQ+GV LMAQ+G FVP A I + DCI ARVGAGD QLRG+S
Sbjct: 675 LVVTGPNMGGKSTYLRQIGVITLMAQIGCFVPAAAGAQIPICDCILARVGAGDSQLRGIS 734
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLETA+ILK AT SL++IDELGRGTSTYDGFGLAWAI E++V +I +FATH
Sbjct: 735 TFMAEMLETATILKSATRDSLVLIDELGRGTSTYDGFGLAWAISEYMVTQIHCKCVFATH 794
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHI------DSTSRKLTMLYKVEPGACDQSF 831
FHE+T+LA +++ GV N HV AH+ + +T+LYKVEPG+ DQS+
Sbjct: 795 FHEMTSLA---------RKLPGVENLHVVAHVTPRENGSQFDKDITLLYKVEPGSSDQSY 845
Query: 832 GIHVAEFANFPESVVTLAREKAAELE 857
GI +AE A+FPE V+ LA+ KA ELE
Sbjct: 846 GIQIAELADFPEDVIRLAKRKAEELE 871
>gi|50554795|ref|XP_504806.1| YALI0F00154p [Yarrowia lipolytica]
gi|49650676|emb|CAG77608.1| YALI0F00154p [Yarrowia lipolytica CLIB122]
Length = 887
Score = 617 bits (1591), Expect = e-173, Method: Compositional matrix adjust.
Identities = 346/856 (40%), Positives = 511/856 (59%), Gaps = 47/856 (5%)
Query: 9 PELKLDAKQARGFLSFYKTL-----PNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTT 62
PE +D + R +FYK L P D +R F+R D Y G +A ++A+ Y T
Sbjct: 4 PEFNIDKTEERSLTAFYKGLEEREEPCDNGGTIRVFERPDGYVLFGVDARYVAERVYRTL 63
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
TAL+ T V+++ + F+ RD LL +E+Y WR+ G+PGNL
Sbjct: 64 TALK---TTDLKQEYVTIATSGFQNFLRDALLNY-GLKVEIYGKVDGKWRMTSWGSPGNL 119
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVE 182
ED++ + ++ PV +A+ + G T+GL +VDL VLG++EF D+ +N+E
Sbjct: 120 SQVEDLM--SGQLNTNPVAIAV----KTQGDTVGLAFVDLNNHVLGVSEFEDNECMSNLE 173
Query: 183 SALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
S L+ L KEC+ + VK+ + R GV T+ K + F ++ +LD L+
Sbjct: 174 SLLIQLDVKECITSDDKVKA--------VIERAGVSRTDAKSSWFNANEVESNLDNLLAE 225
Query: 243 SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
++P +S + A G+L L+ Y L SD SN+G + I+ ++L YM+LD++A++AL+
Sbjct: 226 KLQPTSPELS-LKNALGSLACLIKYLSLTSDASNHGAFTIKTHTLSQYMKLDASALKALH 284
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
++ S D+ K+ SL+GL+N C G R L W+KQPL+D EI R +IV+ F +
Sbjct: 285 LMPSVKDSTKSSSLYGLLN-VCKTATGSRTLAQWVKQPLMDKQEIEKRHEIVEIFTS-SD 342
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
L + +RQ+L I D+ RL ++ A L+ +V++YQ LP+I S L+ + S L+
Sbjct: 343 LLESIRQNLSTIPDLNRLTRKFMRQAASLEDVVRVYQMVATLPHIASGLRAAQ---SELL 399
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
+E +L L+S+ L KF LVE+++DL+ +++ E+MI+ + GL+ K E+ +
Sbjct: 400 EETFLTQLDSIITG--LQKFEELVESTIDLNSIDSHEFMINPDMEEGLNDTKARLEACQD 457
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
++ + + +L + +DK LK + G FR+T+ + +R ++F L T K G
Sbjct: 458 RMKDIFASVSDELGMEMDKKLKFENHHVHGWSFRLTRTDASCLRG--LSKFKELATLKAG 515
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
+ FT +L+ L +++ + +EYK Q L +I+ A ++ + + + +L +LDVL SF
Sbjct: 516 IIFTTNELRSLSNEFTDLSQEYKKIQARLAKEIIEIACSYCPLLERCSAVLGQLDVLTSF 575
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
A +A Y RP + D IL SRHPC+EAQD FIPND L + F +IT
Sbjct: 576 ASVA--IERNYIRPTVVDSDDRKCILTASRHPCLEAQD--TFIPNDVHLGQDSKKFLVIT 631
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVGV +LM Q+G FVPCDRA IS+ DCI ARVGAGD QL+G+STFM E
Sbjct: 632 GPNMGGKSTFIRQVGVIVLMNQIGCFVPCDRAEISIFDCILARVGAGDSQLKGLSTFMSE 691
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLET++ILK ATD+SLIIIDELGRGTSTYDGFGLAWAI EH+V ++ ++FATHFHELT
Sbjct: 692 MLETSAILKSATDKSLIIIDELGRGTSTYDGFGLAWAISEHIV-KMNCFSMFATHFHELT 750
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
LA E+ + V N HV+AH+ +S +T+LYKV PG +S+G HVAE FP
Sbjct: 751 ELAKEHPDR--------VDNLHVAAHVGESSDDITLLYKVVPGVSSKSYGTHVAEVVKFP 802
Query: 843 ESVVTLAREKAAELED 858
VV +A+ KA EL+D
Sbjct: 803 TKVVNMAKRKAQELDD 818
>gi|366997713|ref|XP_003683593.1| hypothetical protein TPHA_0A00740 [Tetrapisispora phaffii CBS 4417]
gi|357521888|emb|CCE61159.1| hypothetical protein TPHA_0A00740 [Tetrapisispora phaffii CBS 4417]
Length = 970
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 377/949 (39%), Positives = 544/949 (57%), Gaps = 92/949 (9%)
Query: 9 PELKLDAKQ-ARGFLSFYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK A RGF + + +LP DT +R DR DYYT G +A F+A T YHT + L
Sbjct: 6 PELKFSAPNDERGFYNKFISLPEKPDT-TIRISDRGDYYTVVGFDAVFVADTVYHTQSVL 64
Query: 66 RQL----GT----GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSG 117
+ GT GS ++S + T+ ++ LLE + +ELY+ NW L+K
Sbjct: 65 KNCNLDHGTSKRFGSIPTQYATLSTQVVSTLLKNCLLE-LGYKVELYD---KNWNLLKCA 120
Query: 118 TPGNLGSYEDVLFANNEMQDTPVIVA---LFPNFRENGCTIGLGYVDLTKRVLGLAEFLD 174
+PGN+ ED++ N D+P+I+A L N + C +GL ++D + +G+ + +D
Sbjct: 121 SPGNIDQVEDLM---NIAVDSPIILASLKLQLNSNDGNCVVGLAFIDAGNQKIGMLDIVD 177
Query: 175 DSHFTNVESALVALGCKECLLP---TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRD 231
+ ++N+ES L+ LG +ECLLP +E K + L RC + T K +EF+ +D
Sbjct: 178 NEVYSNLESCLIQLGVRECLLPDLSKNEANINEIKKITSVLERCNCVATFIKNSEFQAKD 237
Query: 232 LVQDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSY 290
+ DL +L+ + L F +A GA ALL+Y E+L + + G + + +YS+++
Sbjct: 238 VEMDLMKLLGNDLS--LSLPKKFSNLALGACNALLNYLEILQGQDSLGKFELVEYSINNI 295
Query: 291 MRLDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRL 332
M+LD++A++ALN+ S ++ +K SLF L+N C G RL
Sbjct: 296 MKLDASAVKALNLFPNNNAQSYMQSNLAASNGYSNSNESKISSLFQLLNN-CKTKAGVRL 354
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGL 391
L+ WLKQPL D+ EIN R D+V+ +D LR+ L+ +L I D+ R+ L K L
Sbjct: 355 LNEWLKQPLTDLAEINKRHDLVEFLIDQLELRETLQTNYLPSIPDVRRITKKLHKN-GNL 413
Query: 392 QQIVKLYQSSIRLPYIRSALQQY--------EGQFSSLIKERYLDPLESLTDDDHLNKFI 443
+ I+K+Y S ++P I L+ + L+ + ++DP++ + L+KF
Sbjct: 414 EDILKIYLFSKKIPDILQLLESFLDGVDGTVNKNIQELVTDLWIDPIQKHIEP--LSKFE 471
Query: 444 ALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
+VET+VDL+ E + E+MI ++ L+ L+ E + L QI + H + A DL +K
Sbjct: 472 EMVETTVDLEMYESHNEFMIKVEFNEELAKLRMELDQLRNQITTAHLEAAEDLGFDTEKK 531
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
LKL+ G R+T+ + ++RK ++I L T K G+ F+ +LK++ + + +
Sbjct: 532 LKLENHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIYFSTRELKEVAKETAILQK 589
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP-P 621
EY+ Q LV ++ +T++ + + L+ +L+ DVL SFA +S P PY RP ++
Sbjct: 590 EYEKQQSALVREIVGITLTYTPVLEKLSLVLANQDVLCSFAHASSYAPIPYIRPTMHSLQ 649
Query: 622 DVG-DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
D G IL+GSRHP +E QD + FI ND L +G S F IITGPNMGGKST+IRQ+GV
Sbjct: 650 DTGRKTILKGSRHPVLEVQDDLTFISNDISLEKGSSDFLIITGPNMGGKSTYIRQIGVIS 709
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
LMAQ+G FVPCD A ISV D I RVGAGD QL+GVSTFM EMLET+SILK AT SLII
Sbjct: 710 LMAQIGCFVPCDEAEISVVDAILCRVGAGDSQLKGVSTFMVEMLETSSILKNATPNSLII 769
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
+DELGRGTSTYDGFGLAWAI EH+ +I TLFATHFHELT+L K++ V
Sbjct: 770 VDELGRGTSTYDGFGLAWAISEHVASKIGCFTLFATHFHELTSLE---------KKLDNV 820
Query: 801 ANYHVSAHIDSTSRKL---------TMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
N HV AHI S S L T+L+KVEPG DQSFGIHVAE FPE +V +A+
Sbjct: 821 KNLHVVAHIGSVSATLEGNNSTEDITLLFKVEPGISDQSFGIHVAEVVQFPEKIVKMAKR 880
Query: 852 KAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
KA ELED + EV K+ ++S P +M+ G + LK +
Sbjct: 881 KANELEDLK-------NTNKEV--KKLKLS-PQEMNEGNEKLRTLLKNW 919
>gi|255712741|ref|XP_002552653.1| KLTH0C09988p [Lachancea thermotolerans]
gi|238934032|emb|CAR22215.1| KLTH0C09988p [Lachancea thermotolerans CBS 6340]
Length = 955
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 357/894 (39%), Positives = 529/894 (59%), Gaps = 67/894 (7%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + RGF + TLP + +R D+ +YYT G +A F+A YHT + L+
Sbjct: 6 PELKFFDISEERGFYKRFSTLPEKPPKTIRIVDKGEYYTVVGNDALFVADNVYHTNSVLK 65
Query: 67 QL-------GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
+ + L V++S + + + LLE+ +E+Y+ S W+L+++G+P
Sbjct: 66 DCRIDPSTAKSIQEPLKYVTISSQVLSGLLKLCLLEQ-GMKVEIYDKS---WKLLRNGSP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVI---VALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +D++ N D+ ++ + + PN +E C +G+ ++D + +G+ + +D+
Sbjct: 122 GNIEQVDDLM---NISLDSSIVLTSIKIQPNAQEGNCVLGVSFIDSSSYKIGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECLLP---TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ +G KECLLP + ++E K + L RCG + T K ++F RD+
Sbjct: 179 VYSNLESFLIQMGVKECLLPDLRSNETVANELKKMVGVLDRCGCVSTFVKNSDFSHRDVD 238
Query: 234 QDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
QDL +LV E L+ +A G+ ALLSY +LL+DES G Y + ++SL +M+L
Sbjct: 239 QDLVKLVGD--ELSMSLMKFSNLALGSCNALLSYLQLLNDESQLGRYELVQHSLTEFMKL 296
Query: 294 DSAAMRALNVLESKTDA-------------NKNFSLFGLMNRTCTAGMGKRLLHMWLKQP 340
D++A++ALN+ + K S+F L+N+ C G RLL+ WLKQP
Sbjct: 297 DASALKALNIFPTGPSGASGVSVSHGGGSGGKVSSIFQLLNK-CKTNAGVRLLNQWLKQP 355
Query: 341 LLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQ 399
L D+ I R D+V+ +D LRQ L+ +L + D+ RL L K GL+ ++K+YQ
Sbjct: 356 LTDLQAIQNRHDLVEFLIDQLELRQVLQSDYLPLVPDVRRLTKKLNKN-GGLEDVLKIYQ 414
Query: 400 SSIRLPYIRSALQQYEGQFSS------LIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
+ ++P + L+ Y G L+ E +L PL + L+KF +VET+VDL+
Sbjct: 415 FARKIPEVSQVLEDYLGNMDGGDSIKPLVTETWLQPLNAHITP--LDKFQEMVETTVDLE 472
Query: 454 QLEN-GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFG 512
E+ E+MI ++ L+ ++ E ++L+ I S+H A DL +K LKL+ G
Sbjct: 473 AYEDTNEFMIKVDFNEDLAKIRGELDALKDNIKSIHLDAAEDLGFDPEKKLKLENHHMHG 532
Query: 513 HVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV 572
R+T+ + +R+ +++ L T K G+ F+ +LK++ +Q + +EY Q +LV
Sbjct: 533 WCMRLTRNDGKALRQH--RKYLELTTVKAGIYFSTRELKQIAEQTAILQKEYDRLQYDLV 590
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG-DIILEGS 631
++Q +T++ + + L+ +L+ LDVL +FA ++S P PY RP ++ L GS
Sbjct: 591 KEIVQITLTYTPVLEKLSIVLANLDVLSAFAHVSSYAPIPYVRPQMHGLGTQRKTELIGS 650
Query: 632 RHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
RHP +E D V FI ND +L GKS F IITGPNMGGKST+IRQVGV LMAQ+G FVPC
Sbjct: 651 RHPVLETLDDVTFISNDVRLESGKSEFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPC 710
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
D A I+V D + RVGAGD QL+GVSTFM EMLETASILK AT+ SLII+DELGRGTSTY
Sbjct: 711 DTAEIAVVDAVLCRVGAGDSQLKGVSTFMVEMLETASILKNATENSLIIVDELGRGTSTY 770
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DGFGLAW+I EH+ +R LFATHFHELT+LA Q+ V N HV AHI+
Sbjct: 771 DGFGLAWSISEHIARNVRCFALFATHFHELTSLA---------DQVPTVQNMHVIAHIED 821
Query: 812 ------TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
++ +T+LYKVEPG DQSFGIHVAE FP +V++A+ KAAELED
Sbjct: 822 ARASTHSADDITLLYKVEPGISDQSFGIHVAEVVQFPAKLVSMAKRKAAELEDL 875
>gi|66819479|ref|XP_643399.1| hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]
gi|74897320|sp|Q553L4.1|MSH2_DICDI RecName: Full=DNA mismatch repair protein Msh2; AltName: Full=MutS
protein homolog 2
gi|60471699|gb|EAL69655.1| hypothetical protein DDB_G0275809 [Dictyostelium discoideum AX4]
Length = 937
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 365/960 (38%), Positives = 560/960 (58%), Gaps = 89/960 (9%)
Query: 2 DDEQNKLPELKLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTY 58
D+EQ + ++ L K+ + F++F+++L + DT +R FDR+ YY+ HGE+A F+A +
Sbjct: 3 DNEQEESSQVVL--KEDKTFVTFFQSLVSSNEDTDTIRLFDRKGYYSIHGEDAVFVAMMH 60
Query: 59 YHTTTALR-----------QLGTGSDA-----------------LSSVSVSKNM-FETIA 89
+ + +L+ ++ +D L+ +++ + FE I
Sbjct: 61 FKSKKSLKYWSISDPNPKKKIKIDNDGSLTTTASSSQQQQQELGLAVLTIRQGYEFENIV 120
Query: 90 RDLLLERTDHTLELYE---GSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFP 146
++LL E+ +E++ S W L+K G+PGN +EDVL N + V++AL
Sbjct: 121 KELLDEK--KKIEIWSMKPNSKQQWELIKKGSPGNTQMFEDVLLNGN--CEGSVMMALKV 176
Query: 147 NFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECK 206
+ G+ + D T + +G+++F+D+ + +N+ S ++ + KECLL + K+ + +
Sbjct: 177 TREKGSIVFGISFGDATFKTIGVSQFMDNDNLSNLSSFIMQMSVKECLLCCDQ-KNYDYQ 235
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLS 266
+++ L+ G+ TE K++F +++ QDL RL+ + D+ E A + L+
Sbjct: 236 KVKEKLSDAGIPFTELPKSDFSSKNAEQDLTRLLGSVKNNLPDIEQ--EHAIQSASCLIK 293
Query: 267 YAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK-----------------TD 309
+ +LLS+ + +G + + KY LD YM+LDS++ + L++++ K +
Sbjct: 294 HLDLLSNPNYFGKFKLEKYDLDRYMKLDSSSFKGLHIIDLKDSSVSAAAGGGGAGGASSS 353
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
+NK+ SL+ L+N+ C MG RLL W+KQPLL+ EI ARL+ V+AF +D LRQ LR
Sbjct: 354 SNKDQSLYNLLNQ-CNTPMGSRLLLQWVKQPLLNAEEIEARLNFVEAFYNDLELRQSLRS 412
Query: 370 H-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLD 428
+ LK+I D++RL L ++A L+ V LY RLP + +L + LIK +++
Sbjct: 413 NDLKKIGDLDRLSKKLHGQKATLEDCVNLYGIVTRLPVVLQSLNNHSSIHQELIKVNFIE 472
Query: 429 PLESLTDDDHLNKFIALVETSVDLDQLENG-EYMISSSYDTGLSALKNEQESLERQIHSL 487
LES+ D KF A+VE ++DLD + EY+I SS+D L ++ +++ + +I
Sbjct: 473 SLESIISD--FAKFCAMVEKTIDLDLANDKHEYVIRSSFDETLRGIQLKKDQISNKIERF 530
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
A DL+L K +KL + + RI++K+E IR K ++IV T KDGV+F
Sbjct: 531 RVDIADDLNLDEAK-VKLHYSEKDMFLLRISRKDEVAIRDK--KKYIVHATAKDGVRFAT 587
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
++ L + Y+K EY + Q L R +Q A +F + + L+++++ LDV ++ + ++S
Sbjct: 588 REIDTLNEAYKKWSAEYLDKQDGLAKRTLQIAASFVPLIEDLSSLIATLDVFVTLSHVSS 647
Query: 608 SCPTPYTRPDINP-----PDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
P P+ RP+I P G +I+ G RHPCVE QD VNFI ND L RG+S FQIIT
Sbjct: 648 IAPIPFIRPEIIPLGSDENGAGTVII-GGRHPCVEIQDNVNFIANDIDLTRGQSQFQIIT 706
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVG+ +LMAQ+G FVP +A+I+V DCI +RVGAGD QLRGVSTFM E
Sbjct: 707 GPNMGGKSTFIRQVGLIVLMAQIGCFVPAQKATIAVVDCILSRVGAGDSQLRGVSTFMAE 766
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLET+ ILK AT SLIIIDELGRGTSTYDGFGLAW I E++ +I LFATHFHELT
Sbjct: 767 MLETSYILKVATKNSLIIIDELGRGTSTYDGFGLAWGIAEYICNQIGGFCLFATHFHELT 826
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L + + V N HVSA + + T+LYKVE G CDQSFGIHVA ANFP
Sbjct: 827 IL---------SDLLPMVKNLHVSASTQNNT--FTLLYKVEQGPCDQSFGIHVAILANFP 875
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS-DPNDMSRGAARAHQFLKEFS 901
V+ A++KA ELE F + + + K + K I+ + ND+ + + + L ++S
Sbjct: 876 SQVIENAKQKAKELESFESNTLKQNHNKFL--EEFKEINFNSNDVEKSLSLVNSLLNKYS 933
>gi|320588440|gb|EFX00909.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 862
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 342/807 (42%), Positives = 480/807 (59%), Gaps = 52/807 (6%)
Query: 84 MFETIARDLLLE---RTDHTLELYEGSGS--NWRLVKSGTPGNLGSYEDVLFANNEMQDT 138
M T+ R L E + +E++ SG NW++ K +PGNL ED L + +
Sbjct: 1 MTVTVFRQFLREALFKLGKRVEIWASSGGRMNWKIAKQASPGNLQDVEDEL---GQFDNA 57
Query: 139 PVIVALFPNFREN-GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT 197
P+I+A+ + + N G T+G+ + D T R LG++EFLD+ ++N E+ L+ LG +EC++ T
Sbjct: 58 PMILAVKISAKANEGRTVGVCFADATVRELGVSEFLDNDLYSNFEALLIQLGVRECIVQT 117
Query: 198 E------AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLV 251
E +VK E L+ + CGV + ER ++F +D+ QDL RL++ +
Sbjct: 118 ERLDQDGSVKDPELSKLKQIIDNCGVAVAERALSDFAIKDIEQDLARLLKDERATLVLPQ 177
Query: 252 SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDAN 311
S ++A G+ AL+ Y +L D SN+G Y + ++ L +M+LD+AA++ALN++ D +
Sbjct: 178 SDLKLALGSAAALIKYLGVLQDPSNFGQYQLYQHDLSQFMKLDAAAVKALNLMPGARDGS 237
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-H 370
K SLFGL+N C +G RLL WLKQPL++ +I R +V+AFV+DT LRQ +++ H
Sbjct: 238 KTMSLFGLLNH-CKTPLGGRLLSQWLKQPLMNKADIEQRQQLVEAFVNDTELRQTMQEDH 296
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L+ + D+ RL ++ +A L+ +V+ YQ IRLP + G ++ E Y PL
Sbjct: 297 LRSVPDLYRLAKRFQRNKANLEDVVRAYQVVIRLP-------GFLGTLEGVMDEAYRVPL 349
Query: 431 ESL------TDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
++ T D L K +VET+VDLD L+N E++I +D L ++ + + L +
Sbjct: 350 DAAYTTKLRTLSDSLAKLQEMVETTVDLDALDNHEFIIKPEFDDSLRIIRRKLDRLRLDM 409
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
+ A DL DK + L+ G R+T+ E IR + +Q+ T+K+GV
Sbjct: 410 DREFAEAARDLHQERDKKIFLENHKVHGWCMRLTRTEAGCIRNQ--SQYQECSTQKNGVY 467
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
FT L+ L ++ ++ Y Q LV+ V+ A ++S + + LA +L LDV++S A
Sbjct: 468 FTTKALQALRREFDQLSSNYNRTQSSLVSEVVGVAASYSPVLERLAGVLGHLDVIVSLAH 527
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGP 664
+ P Y RP I+ G +L +RHPC+E QD V FI ND L R S F IITGP
Sbjct: 528 CSVHAPIAYVRPRIHARGEGRTVLREARHPCLEMQDDVQFITNDVVLDRESSAFLIITGP 587
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NMGGKST+IRQ+GV LMAQ+G FVPC A +++ D I ARVGA D QL+GVSTFM EML
Sbjct: 588 NMGGKSTYIRQIGVIALMAQIGCFVPCAEAELTLFDSILARVGASDSQLKGVSTFMAEML 647
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
ETA+ILK AT SLIIIDELGRGTSTYDGFGLAWAI EH+V EI LFATHFHELTAL
Sbjct: 648 ETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVREIGCFALFATHFHELTAL 707
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTS-----------RKLTMLYKVEPGACDQSFGI 833
A V N HV+AHI T R++T+LYKVEPG CDQSFGI
Sbjct: 708 ADRYPQ---------VTNMHVTAHISGTGSSEDTAKKDEKREVTLLYKVEPGICDQSFGI 758
Query: 834 HVAEFANFPESVVTLAREKAAELEDFT 860
HVAE FP+ VV +A+ KA ELEDF+
Sbjct: 759 HVAELVRFPDKVVRMAKRKADELEDFS 785
>gi|242216709|ref|XP_002474160.1| predicted protein [Postia placenta Mad-698-R]
gi|220726705|gb|EED80646.1| predicted protein [Postia placenta Mad-698-R]
Length = 949
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 354/902 (39%), Positives = 529/902 (58%), Gaps = 102/902 (11%)
Query: 12 KLDAKQARGFLSFYKTLPN---DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
++D GF+SF+ LP +T +R F R ++Y+AHG +A ++A ++ T + ++ L
Sbjct: 14 EIDNASHPGFISFFAKLPPKSPETGTLRLFFRNEWYSAHGPDALYVAAHFFRTNSVIKYL 73
Query: 69 GTGSDA-LSSVSVSKNMFETIARDLLLERTDHTLELY---EGSG---SNWRLVKSGTPGN 121
G G + L SV++++++ +T+ R+ L + +E++ G G + ++L K +PGN
Sbjct: 74 GPGGKSGLPSVNLTESVAKTLLREALTAK-QLKVEIWVPEAGQGKKATRFKLDKEASPGN 132
Query: 122 LGSYEDVLFANNEMQDTPVIVAL---------FPNFRENGCTIGLGYVDLTKRVLGLAEF 172
L + ED+LF N ++ P+++A+ + + T+G+ + D R +G+A+F
Sbjct: 133 LQAVEDMLFVNTDILSAPIVMAIKIMSTPAAVAASSKAKTKTVGIAFADTNTREIGVADF 192
Query: 173 LDDSHFTNVESALVA----------LGCKECLLPTEAV-----KSSECKTLRDALTRCGV 217
+D+ F+NVE L L KE L+PT + E K +++ L RCGV
Sbjct: 193 VDNDLFSNVEVCLSLCESISTGKNDLSVKEALIPTGTTTGTTERDIELKKVKELLERCGV 252
Query: 218 MLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSG----------FEIAPGALGALLSY 267
++TERK +EF +++ D+ +L+ S P V +AP AL AL+SY
Sbjct: 253 VITERKPSEFTAKNIKDDMAQLLTPSSLPSSSNVDASLVVHAAELSLPVAPSALSALVSY 312
Query: 268 AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAG 327
LLSD SN G Y IR + L +M+LD++A+RALN+ E+
Sbjct: 313 LSLLSDPSNRGAYSIRTHDLSQFMKLDASALRALNLTEA-------------------PA 353
Query: 328 MGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEK 386
G RLL WLKQPL++++EI+ R ++V+ FV+DT+ R+ L+ ++LK + D+ R+ K
Sbjct: 354 QGSRLLGSWLKQPLVNLHEIHKRQNLVEIFVEDTSTRRTLQDEYLKMMPDMHRICKRFGK 413
Query: 387 RRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL----DPLESLTDDDHLNKF 442
A L+ +V++YQ+ I ++ E + +LI E YL P D L+K+
Sbjct: 414 SVASLEDVVRVYQA------ILKGVETVE-DYKALIDEAYLANHTHPGHDF--DISLSKY 464
Query: 443 IALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
+V+ ++DLD+LEN ++I YD+ L AL ++ + + + H++ DL +DK
Sbjct: 465 SEMVQQTLDLDELENHNFVIKPEYDSRLQALADKLKEIRDSLDEEHQEVGRDLGFELDKK 524
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
L L+ G+ FR++K + + + + ++I L T K G FT T LK+L D +++ +
Sbjct: 525 LHLENSPTHGYCFRVSKSDWNVVHR--SKKYIDLGTLKSGQFFTTTTLKELSDDHKETTQ 582
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
Y Q LV V+ A T++ + +S +L+ LDV++SFA +A + P Y +P +
Sbjct: 583 MYSKTQSGLVKEVVNIAATYTPVLESWNNVLAHLDVIVSFAHVAVNAPESYVKPKLMEKG 642
Query: 623 VGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
G +IL+ +RHPC+E QD ++FIPND ++I+ TGPNMGGKST+IRQ GV LM
Sbjct: 643 SGSLILKDARHPCLEVQDDMSFIPNDVEMIK--------TGPNMGGKSTYIRQTGVIALM 694
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQ GSFVPC ASI + D + RVGAGD QL+G+STFM EMLETA+IL+ A+ SLIIID
Sbjct: 695 AQTGSFVPCSEASIPIFDSVLCRVGAGDSQLKGISTFMAEMLETATILRSASKDSLIIID 754
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
ELGRGTSTYDGFGLAWAI EH+ EI A LFATHFHELTAL E + V N
Sbjct: 755 ELGRGTSTYDGFGLAWAISEHVASEIHAFCLFATHFHELTALDQE---------IPHVKN 805
Query: 803 YHVSAHIDST-----SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
HV AH+ + R +T+LYKVEPG CDQSFGIHVAE ANFPE+VV LA+ A ELE
Sbjct: 806 LHVVAHVSKSDDSARERDITLLYKVEPGVCDQSFGIHVAELANFPENVVKLAKRTADELE 865
Query: 858 DF 859
DF
Sbjct: 866 DF 867
>gi|50290307|ref|XP_447585.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526895|emb|CAG60522.1| unnamed protein product [Candida glabrata]
Length = 957
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 365/937 (38%), Positives = 551/937 (58%), Gaps = 79/937 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + RGF Y LP + VR D+ DYYTA G++A FIA+ YHT + L+
Sbjct: 6 PELKFSDISEERGFYKRYVKLPEKPSGTVRIVDKGDYYTAVGDDAVFIAENVYHTMSVLK 65
Query: 67 QLGTG-------SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
++ V++S + ++ + LL+ + +E+Y+ S W+L+KS +P
Sbjct: 66 DCHVDPAVAKQFNEPTKYVTMSLQIVASLLKLCLLD-VGNKVEIYDRS---WKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVA---LFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ D+L N D +++A + N ++ +GL ++D + +G+ + +D+
Sbjct: 122 GNIEQVSDLLNLN---IDASIVIASLKIQQNPKDAHVILGLTFIDTSNYKIGMMDIIDNE 178
Query: 177 HFTNVESALVALGCKECLLPTEAVKSS---ECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG +ECL+P + S E K + + + RCG ++T +EF +D+
Sbjct: 179 AYSNLESFLIQLGIRECLVPDLSQNGSTNPELKKITNVIDRCGSVVTIVPNSEFSNKDVE 238
Query: 234 QDLDRLVRGSVE-PVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + + VS ++A GA ALL+Y +LLS++ G Y + ++SL+S M+
Sbjct: 239 VDLAKLLGNDLTLTLPQNVS--QLALGACNALLNYLQLLSEQEMLGKYELIQHSLESIMK 296
Query: 293 LDSAAMRALNV-----------LESKT----DANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
LDS+A++ALN+ ++S T K SLF L+N C G RLL+ WL
Sbjct: 297 LDSSAIKALNLFPQNNATFFTPMQSGTVGSNGGTKVASLFQLLN-NCKTNSGVRLLNEWL 355
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVK 396
KQPL D + I R ++V+ +D LRQ L+ ++L + DI RL+ L K L+ ++K
Sbjct: 356 KQPLTDFSGIQVRHNLVEFLIDQLELRQILQTEYLPGVPDIRRLVKKLNKN-GTLEDVLK 414
Query: 397 LYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+YQ S+++P I + ++ + L+++ + DPL+ + L KF +V+T+V
Sbjct: 415 VYQFSLKVPDIINIIESFLEDDITTTDIKELVRKTWCDPLKEFMEP--LKKFDEMVQTTV 472
Query: 451 DLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
DLD E N E+MI ++ L+ ++ + ++ +I+++H + A DL +K LKL+
Sbjct: 473 DLDAYEENNEFMIRVEFNEELAKVREQLTAMRDEINAIHLEAAEDLGFDPNKKLKLENHH 532
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
G R+T+ + +R Q+I L T K G+ F+ K+K++ + + ++Y+ Q
Sbjct: 533 IHGWCMRLTRNDAKALRNH--KQYIELSTVKAGIFFSTRKMKEIAQETVVLQKDYERLQS 590
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD-IIL 628
LV ++ +T++ IF+ L+ +++ LDVL SFA +S P PY RP ++P L
Sbjct: 591 SLVKEIVSITLTYTPIFEKLSLVIAHLDVLCSFAHASSYAPIPYVRPTMHPLSSDRRTKL 650
Query: 629 EGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP +E QD V FI ND + + S FQIITGPNMGGKST+IRQVGV LMAQ+G F
Sbjct: 651 MNSRHPVLEVQDDVTFIANDVDMAKDVSEFQIITGPNMGGKSTYIRQVGVITLMAQIGCF 710
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A IS+ D I RVGAGD QL+GVSTFM EMLETASILK AT SLII+DELGRGT
Sbjct: 711 VPCDNAEISIVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNATSNSLIIVDELGRGT 770
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
STYDGFGLAWAI EH+ +EIR LFATHFHELT L ++Q+ V N HV AH
Sbjct: 771 STYDGFGLAWAIAEHIAKEIRCFALFATHFHELTNL---------SEQLPNVKNMHVIAH 821
Query: 809 IDSTSRKL-----TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
ID + + L T+LYKVEPG D+SFGIHVAE FP+ +V++A+ KA ELE+ +
Sbjct: 822 IDESEKALNSNDITLLYKVEPGISDRSFGIHVAEVVQFPKKIVSMAKRKANELEELKNT- 880
Query: 864 VISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
S+D KR ++ +P +++ G + LKE+
Sbjct: 881 --SNDL------KRAKL-NPQEIAEGNLKLKCMLKEW 908
>gi|307192503|gb|EFN75691.1| DNA mismatch repair protein Msh2 [Harpegnathos saltator]
Length = 857
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 336/807 (41%), Positives = 496/807 (61%), Gaps = 36/807 (4%)
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLG 123
+G V ++KN FET RDLLL + + +E+Y GS NW L G+PGNL
Sbjct: 2 IGAEPHKTEGVILNKNHFETFVRDLLLVK-QYRVEVYVNQGSAKNQNWILEYKGSPGNLS 60
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+ED+LF NN++ ++A+ +GL VD+ ++ +AEF D+ F+N+ES
Sbjct: 61 HFEDILFGNNDIAVGVSVIAVKLGTEGKSRVVGLSCVDVVSTLISVAEFQDNESFSNLES 120
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
+V L KECLL + S E + L+ + R V++T RKK+EF + +++DL+ L++
Sbjct: 121 LVVTLAPKECLL-IQGEGSYEFQNLKQMMERSNVLVTLRKKSEFSSDSVIEDLNTLIKFK 179
Query: 242 -GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
G + + L IA A AL+ Y +L SDE + + +++ Y+RLDSAA++
Sbjct: 180 KGQKQNAQSLPEVNLNIAMSATSALIKYLDLTSDEGHMNQFALKQVEQSRYLRLDSAAIK 239
Query: 300 ALNVLESKTDANKNF------SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
ALN+ E + D+ N S+ L+++ C G RL+ W++QPL D++ I R DI
Sbjct: 240 ALNI-EPRVDSASNLHGNPVASILTLLDK-CRTAQGHRLIAQWVRQPLRDLSLIKERHDI 297
Query: 354 VQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V+ V + LR L +L+RI D+++L L ++++ LQ K+Y LP + L
Sbjct: 298 VELLVKNNELRSALCEDYLRRIPDLQQLAKKLARKKSALQDCYKIYLCVSYLPKLLEQLA 357
Query: 413 QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
E ++L K +DPL+ L +D ++KF LVE ++DLD E G++MI+S + A
Sbjct: 358 P-EANLAAL-KAIIIDPLKELIED--MDKFQQLVEQTIDLDAAEKGDFMINSGFTDDFKA 413
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
LK+ + +E I + A DL L KA+KL+ QFG+ FRIT KEE +R K
Sbjct: 414 LKDTMDEMEEIIQQQLSKVADDLLLEAGKAIKLESNQQFGYYFRITLKEEKVLRNK--KH 471
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
+ +L++ K GV+F N+KL +L D + +Y + QK+++ ++ A +SE +++ ++
Sbjct: 472 YNILDSNKTGVRFRNSKLSELNDDFIAARNKYMDKQKDVIAEIMGIAAGYSETVRAIGSV 531
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
L+ LDVL +FA A S Y RPD+ P + G++ L RHPC+E Q +++I ND
Sbjct: 532 LACLDVLTAFASAAVSANKVYVRPDMVPSEEGELNLVQIRHPCLEMQQGIDYIANDVNFK 591
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
R + F+IITGPNMGGKST+IR VGV LMA +GSFVPCD+A+IS+ DCI ARVGA D Q
Sbjct: 592 RDQCHFRIITGPNMGGKSTYIRSVGVTALMAHIGSFVPCDKATISLLDCILARVGADDSQ 651
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+G+STFM EM+ETA+ILK AT SL+IIDELGRGTSTY+G G+AW+I EHL ++I++
Sbjct: 652 LKGLSTFMMEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLAKDIKSYC 711
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFG 832
LFATHFHE+T LA E + V N HV+A +++ KLT+LYKV+ G CDQSFG
Sbjct: 712 LFATHFHEITKLAEE---------ISTVKNEHVTALVENN--KLTLLYKVKSGICDQSFG 760
Query: 833 IHVAEFANFPESVVTLAREKAAELEDF 859
+HVA+ ANFP+ V+ A+ K AELED+
Sbjct: 761 LHVAKMANFPQDVIEFAKRKQAELEDY 787
>gi|50310365|ref|XP_455202.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644338|emb|CAG97910.1| KLLA0F02706p [Kluyveromyces lactis]
Length = 956
Score = 610 bits (1573), Expect = e-171, Method: Compositional matrix adjust.
Identities = 354/893 (39%), Positives = 522/893 (58%), Gaps = 66/893 (7%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDTR-AVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK D + RGF + LP ++ +R D+ DYY G++A F+A YHT++ L+
Sbjct: 5 PDLKFSDIAEERGFYKRFLQLPQRSQNTIRLVDKSDYYIVVGDDALFVADQVYHTSSVLK 64
Query: 67 QLGTG---------SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSG 117
+ L V++S + + + LLE +E+Y+ NW+L+K+
Sbjct: 65 DCKIDPSTLRQFDLQEPLKYVTMSIQIVGNLLKTSLLE-LGKKIEIYD---RNWKLLKTA 120
Query: 118 TPGNLGSYEDVLFANNEMQDTPVIVALFPNFR----ENGCTIGLGYVDLTKRVLGLAEFL 173
+PGNL +D++ + ++ V+ +L NF N CTIG+ +VD T +GL + L
Sbjct: 121 SPGNLEQVDDLIVGS--VETNIVLASLKLNFNGTAASNYCTIGVSFVDNTNYRIGLFDLL 178
Query: 174 DDSHFTNVESALVALGCKECLLPT---EAVKSSECKTLRDALTRCGVMLTERKKTEFKTR 230
D+ F+N+ES L+ LG KECL+P +++ K + + RC + + K ++F +
Sbjct: 179 DNEVFSNLESCLIQLGIKECLIPDLRDNPSMANDLKKILSVIDRCSCVASFVKPSDFNGK 238
Query: 231 DLVQDLDRLVRGSVEPVRDLVSGFEI-APGALGALLSYAELLSDESNYGNYYIRKYSLDS 289
D+ DL +L + VS F GA LL+Y ++++E+N GN+ + +SL
Sbjct: 239 DVEADLAKLCGDELSLS---VSKFSANCLGACSVLLNYLNIMNNEANVGNFEVVDHSLSQ 295
Query: 290 YMRLDSAAMRALNVLESKTDAN----------KNFSLFGLMNRTCTAGMGKRLLHMWLKQ 339
+++LD++A++ALNV + + N K SLF L+NR C G RLL+ WLKQ
Sbjct: 296 FVKLDASAIKALNVFPTGSQGNTALLSVGSPQKCSSLFQLLNR-CKTNSGVRLLNEWLKQ 354
Query: 340 PLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLY 398
PL D+++I R D+V+ F+D LR L++ L + DI RL L+K L+ ++K+Y
Sbjct: 355 PLTDIDQITKRHDLVEFFMDQLELRSSLQEECLPSVPDIRRLTKKLQKN-GNLEDVLKIY 413
Query: 399 QSSIRLPYIRSALQQYEGQFSS-----LIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
Q + +P I L+Q + S L+KE LDP+ L + + L K LVET+VDL+
Sbjct: 414 QFAQMVPVISDLLKQKTEEVDSNDLMILVKEVLLDPM--LENANPLEKLKELVETTVDLE 471
Query: 454 QLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFG 512
E E+MI ++ LS ++ + L+ I ++H TA DL +K LKL+ G
Sbjct: 472 AYEETNEFMIKVEFNEQLSIIRTHLDELKDAIRTIHLDTADDLGFDPEKKLKLENHHLHG 531
Query: 513 HVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV 572
R+T+ + +R+ ++I L T K G+ F+ +LK + ++ ++ ++Y+ Q LV
Sbjct: 532 WCMRLTRNDAKALRQH--KKYIELSTVKAGIFFSTKELKNIAEETSELQKKYEQQQASLV 589
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE--G 630
++ ++++ + + L+ + ++LD+L SFA ++S P PY RP + P + + E
Sbjct: 590 KEIVSITLSYTPVLEKLSVVTAQLDILCSFAQVSSYAPIPYVRPKMYPLNDQNRTTELIA 649
Query: 631 SRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
SRHP VE QD V FI ND KL++G S F +ITGPNMGGKST+IRQ+GV LMAQ+G FVP
Sbjct: 650 SRHPIVEMQDDVTFISNDVKLVQGDSEFIVITGPNMGGKSTYIRQIGVICLMAQIGCFVP 709
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
CD A I+ D I RVGAGD QL+GVSTFM EMLETASILK AT SL+I+DELGRGTST
Sbjct: 710 CDEAKIAAVDAILCRVGAGDSQLKGVSTFMMEMLETASILKNATHNSLVIVDELGRGTST 769
Query: 751 YDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID 810
YDGFGLAW+I EH+ I TLFATHFHELT LA + N V+N HV AHI+
Sbjct: 770 YDGFGLAWSISEHIATNINCFTLFATHFHELTTLADKLDN---------VSNMHVVAHIE 820
Query: 811 S----TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
S +T+LYKVE G+ DQSFGIHVAE FP +V +A+ KAAELED
Sbjct: 821 DNGSHNSDDITLLYKVEAGSSDQSFGIHVAEVVQFPSKIVNMAKRKAAELEDL 873
>gi|392576842|gb|EIW69972.1| hypothetical protein TREMEDRAFT_30126 [Tremella mesenterica DSM
1558]
Length = 948
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 349/898 (38%), Positives = 526/898 (58%), Gaps = 66/898 (7%)
Query: 11 LKLDAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
++LD F F +P +R FDR DY++AHG +A +A + TT ++ LG
Sbjct: 1 MRLDKAGEDQFCRFVDRMPEKPDGMIRLFDRGDYFSAHGSDALIVAHQVFKTTNVIKYLG 60
Query: 70 TGSD----------------ALSSVSVSKNMFETIARDLLLERTDHTLELY---EGSGS- 109
+ S L SV +S N+ + R+ L R +E+Y +G+G
Sbjct: 61 SSSLSSSIPSTSKNTSMTPRGLPSVDISTNLTKAFLRECLTTR-QMRVEIYIPEDGTGGR 119
Query: 110 ----NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKR 165
W L K +PGN+ ED++F N ++ V +AL + + T+G ++D+ ++
Sbjct: 120 KNHYKWILGKVASPGNIEQVEDLIFDNEDLDSNAVSMALKLHMVQGIRTVGCAFLDVQEK 179
Query: 166 VLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSS-ECKTLRDALTRCGVMLTERKK 224
LG++E++DD++F N ES L+ L KEC+LP++ ++ E LR + RCG+++TER+
Sbjct: 180 TLGVSEYVDDANFGNTESLLIQLQVKECILPSDEKRADVELTKLRTMIDRCGLVITERRS 239
Query: 225 TEFKTRDLVQDLDRLVRG----SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNY 280
++K ++ QD+ RL+ G + P DL ++A +L ALL Y L++ +
Sbjct: 240 ADYKAGNIEQDVSRLLDGGHTSTTLPEFDL----KLAMSSLAALLVYTNLVTSPQYEHQF 295
Query: 281 YIRKYSLDSYMRLDSAAMRALNVLESKTD--ANKNFSLFGLMNRTCTAGMGKRLLHMWLK 338
+ ++ L YM+LD++A++AL+++ + + +N SL+GL+N+ C G+RLL WLK
Sbjct: 296 RLYRHDLTQYMKLDASAVKALSLMPNPQELGGGRNMSLYGLLNQ-CKTSQGQRLLGRWLK 354
Query: 339 QPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKL 397
QPL++++EI R IV+AFVDD RQ L+ Q L R+ D R+ L + A L ++V++
Sbjct: 355 QPLVNLHEIRQRQGIVEAFVDDALARQTLQEQFLSRMPDFHRISKKLHRNVASLDEVVRV 414
Query: 398 YQSSIRL--PYIR--SALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
+ + I+L P I L E + LI Y+ L +D L + +VE +VDL+
Sbjct: 415 FYA-IQLIGPMIEVLETLNTSE-ENKQLIATIYVIALRD--HEDKLTTYSQMVEDTVDLN 470
Query: 454 QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGH 513
+ +++ +S+D L K + ++ + H + +L L + K L L++ + +
Sbjct: 471 DKTSHNHVLQASFDPKLEEYKTQLMAVRSALDEEHAKVGEELGLDIGKKLHLERHQVYNY 530
Query: 514 VFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVN 573
FRITK E IR K Q+ L T+K G FT LK L + Y +++++Y + Q+ LV
Sbjct: 531 SFRITKAEAGLIRNK--KQYRDLATQKSGTIFTTATLKGLSEDYDRLMDKYNDKQRTLVK 588
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI-NPPDVGDIILEGSR 632
V+ A +++ + ++L +++ +DV +S A ++++ TPY RP + +I+ G+R
Sbjct: 589 EVVSIAASYTPVLEALDNLIAAIDVTVSLARVSANANTPYVRPVLFEKGKPTHVIVRGAR 648
Query: 633 HPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
HPC+E QD V+FI ND ++ +GK F ++TGPNMGGKST+IRQ+GV LMAQ+G FVP D
Sbjct: 649 HPCLEVQDDVSFIANDHEMKKGKCEFVVLTGPNMGGKSTYIRQIGVIALMAQIGCFVPAD 708
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
A + V DCI ARVGAGD QL+GVSTFM EMLETA+IL+ AT SLIIIDELGRGTSTYD
Sbjct: 709 EAQLPVFDCILARVGAGDSQLKGVSTFMAEMLETATILRSATKDSLIIIDELGRGTSTYD 768
Query: 753 GFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
GFGLAWAI EH+ +IR LFATH+HELTAL + V N HV AH+
Sbjct: 769 GFGLAWAISEHIATKIRCFCLFATHYHELTALNQTQPH---------VKNLHVEAHVQPI 819
Query: 813 S-------RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
R +T+LYKV G CDQSFGIHVAE A FPES++ LA+ KA ELEDF A
Sbjct: 820 KGGKSKQDRDITLLYKVTEGICDQSFGIHVAELAQFPESIIKLAKRKAEELEDFGDGA 877
>gi|366988079|ref|XP_003673806.1| hypothetical protein NCAS_0A08670 [Naumovozyma castellii CBS 4309]
gi|342299669|emb|CCC67425.1| hypothetical protein NCAS_0A08670 [Naumovozyma castellii CBS 4309]
Length = 959
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 358/896 (39%), Positives = 521/896 (58%), Gaps = 69/896 (7%)
Query: 9 PELKL-DAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + RGF Y TLP + +R D+ DYYT G +A F+A+ YHT + L+
Sbjct: 6 PELKFSDLSEERGFYKRYITLPEKPSTTLRIVDKGDYYTVIGNDAIFVAENVYHTLSVLK 65
Query: 67 QLGTGS-------DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
S +AL V++S + T+ + LL+ + +E+Y+ W+L KS +P
Sbjct: 66 DCHLDSVTSKQFQEALKYVTISPQVVSTLLKTCLLD-LGYKIEIYDKL---WKLQKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVA---LFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ D++ N D+ +++A L N +E +G+ ++D + +G+ + +D+
Sbjct: 122 GNVEQVNDLM---NIAIDSSIVIASLKLQVNSKEGNSVLGVAFIDTSNYKIGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG +EC+ L S E K + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVRECIVQDLTNNENTSREFKKIIGVIDRCGSVVTLVKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ E L + +A GA ALL Y ELL+++ G + + ++SL +M+
Sbjct: 239 MDLTKLINN--ELSLSLPKKYSNLAMGACNALLGYLELLNEQDQLGKFELIEHSLQEFMK 296
Query: 293 LDSAAMRALNVLE---------------SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
LD++A++ALN+ K SLF L+N C G RLL+ WL
Sbjct: 297 LDASAIKALNLFPQGPVQPFGPTPTASFGTASGGKIASLFQLLN-NCKTNAGIRLLNEWL 355
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVK 396
KQPL D+ I R D+V +D LRQ L+ L I D+ RL L K L+ ++K
Sbjct: 356 KQPLTDLARIEQRHDLVDYLIDQLELRQMLQTDTLPMIPDLRRLTKKLNKN-GNLEDVLK 414
Query: 397 LYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
++Q S ++P + L+ + + SLIK +LDPL S D L+KF +VET+V
Sbjct: 415 IFQFSQKIPEVAQLLESFLEDDNSNSKVKSLIKMVWLDPLTSHLDP--LSKFQEMVETTV 472
Query: 451 DLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
DL+ E N ++MI ++ L+ ++ + +SL QI+++H A DL DK LKL+
Sbjct: 473 DLEAFETNNQFMIKVEFNEELAKIREQLDSLREQINAIHLNAADDLGFDPDKKLKLENHH 532
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
G R+T+ + ++RK ++ L T K G+ F+ +LK++ + K+ ++Y Q
Sbjct: 533 LHGWCMRLTRNDAKELRKH--RNYLELSTVKAGIFFSTKELKEIAQETIKLQKDYDRLQS 590
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD-VGDIIL 628
LV ++ VT++ + + L+ +L+ LDVL SFA ++S P PY RP ++P D L
Sbjct: 591 ALVKEIVGITVTYTPVLEKLSQVLAHLDVLCSFAHVSSYAPIPYVRPKMHPFDSTRRTHL 650
Query: 629 EGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
GSRHP +E QD + FI ND L+ G+ F IITGPNMGGKST+IRQVGV LMAQ+G F
Sbjct: 651 VGSRHPVLEMQDDLTFISNDVDLVDGEGDFLIITGPNMGGKSTYIRQVGVISLMAQIGCF 710
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPC+ A I++ D I RVGAGD QL+GVSTFM EMLETASILK AT SLII+DELGRGT
Sbjct: 711 VPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNATKNSLIIVDELGRGT 770
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
STYDGFGLAWAI EH+ +I LFATHFHELT+L+ + +N V N HV A+
Sbjct: 771 STYDGFGLAWAIAEHIASKIGCFALFATHFHELTSLSDKFSN---------VKNMHVVAY 821
Query: 809 IDSTSRKL-----TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
I+ + +L T+LYKVEPG DQSFGIHVAE FP+ +V +A+ KA+ELED
Sbjct: 822 IEKGTDQLESDDITLLYKVEPGISDQSFGIHVAEVVQFPDKIVKMAKRKASELEDL 877
>gi|238859677|ref|NP_001154964.1| mutS homolog 2 [Nasonia vitripennis]
Length = 919
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 339/865 (39%), Positives = 530/865 (61%), Gaps = 38/865 (4%)
Query: 10 ELKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+ +D+ +GF+ F+K+LP + +RFF+R DYYT HG +A F A+ + TT+ +++
Sbjct: 8 QFDMDSATQQGFVRFFKSLPEKPSSTIRFFNRSDYYTLHGSDALFAAQEVFKTTSVCKKI 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLGS 124
G + + V ++KN FET RDLLL + + +E+Y GS +W + G+PGNL
Sbjct: 68 GPEHNKIDGVILNKNNFETFVRDLLLVK-QYRVEVYVNRGSHKNQDWIVEYKGSPGNLAQ 126
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+ED+LF N+E+ ++A+ + + +G+ +D+ K + ++EF DD F ++E
Sbjct: 127 FEDMLFNNSEVAVEAGVIAVKFSAEASSKVVGICCIDVIKSSIAVSEFKDDESFMDLEGI 186
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR--- 241
+V+L KEC+L + + + K +++ + R V++T RKK EF T L+ DL+ ++R
Sbjct: 187 VVSLKPKECILQS-GESNPDFKAVKELMERNNVLVTPRKKAEFSTDSLITDLNVILRFDK 245
Query: 242 GSVEPVRDLV-SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
G + L + ++A A AL+ Y L+ D + + + + Y+RLD+AA++A
Sbjct: 246 GQQRNSQALSQTNMQLAMPATAALIRYLNLVEDRGSADQFTLEEIERSRYLRLDAAAIKA 305
Query: 301 LNVLESKTDA-----NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQ 355
LNV E + DA S+ GL+++ C G+RLL W++QPL D+ I R ++V
Sbjct: 306 LNV-EPRPDAPTFGNAATSSILGLLDK-CRTAQGRRLLAQWIRQPLKDLALIKERHEVVG 363
Query: 356 AFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
F+D++AL +L + L+R+ D+++L L K++AGL + K+YQ LP + L
Sbjct: 364 TFLDNSALSTELSEDFLRRVPDLQQLAKKLAKKKAGLYECYKIYQCMTNLPGLIEKLNSV 423
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
++ +K LDPL+ ++ ++KF + E ++DLD + G++++ +D L LK
Sbjct: 424 SD--NAAVKTMLLDPLKEYLEE--MDKFQQMAEQTIDLDAADKGDFLVKPEFDDELKELK 479
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ +S E ++ SL + A DL + K++KL+ Q+G+ FRIT KEE +R +
Sbjct: 480 SVMDSNEAKMKSLLSRAADDLGMEAGKSIKLETTPQYGYHFRITLKEEKSLRN--NKSYT 537
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
+L++ K GV+F N KL+ L D Y + Y + QK +V ++ TA + K +A +++
Sbjct: 538 ILDSIKGGVRFRNKKLEDLNDVYATAYDSYTSQQKNIVAEIVNTAGGYVPTIKMIAGVIA 597
Query: 595 ELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDVL SFA A++ T Y RP++ P + + L +RHPC+E Q+ VN+I ND +
Sbjct: 598 TLDVLNSFAMAAATALTTYVRPEMLPSEEQVLHLVQARHPCLEMQEGVNYIANDVHFTK- 656
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
F I+TGPNMGGKST+IR +GV LMA +GSFVPC +A+ISV D I AR+GA D Q++
Sbjct: 657 DDRFHIVTGPNMGGKSTYIRSIGVTALMAHIGSFVPCTKATISVLDSILARIGADDSQIK 716
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
G+STFM EM+ET++I++ AT SL+IIDELGRGTSTYDG G+AWAI EHL +E++A LF
Sbjct: 717 GLSTFMAEMVETSAIIRTATVNSLVIIDELGRGTSTYDGCGIAWAIAEHLAKEVKAYCLF 776
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATHFHE+T LA + + +NYHV+A + KLT+LYKV+PG CDQSFGIH
Sbjct: 777 ATHFHEITRLAEDVST---------ASNYHVTAMV---GDKLTLLYKVKPGICDQSFGIH 824
Query: 835 VAEFANFPESVVTLAREKAAELEDF 859
VA+ A+FPE V+ A++K ELED
Sbjct: 825 VAKMADFPEEVIEFAKQKQTELEDL 849
>gi|384500813|gb|EIE91304.1| hypothetical protein RO3G_16015 [Rhizopus delemar RA 99-880]
Length = 862
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 354/876 (40%), Positives = 511/876 (58%), Gaps = 96/876 (10%)
Query: 7 KLPELKLDAKQARGFLSFYKTLP-NDTRAVRFFDRR----DYYTAHGENATFIAKTYYHT 61
+LP+++ +Q F+ F+++L + +R F+R +YYT HG++A +IA+T Y T
Sbjct: 9 ELPDVEKPEQQT--FVKFFRSLDLVEEGTIRLFEREANGSNYYTFHGDDAIYIAETVYKT 66
Query: 62 TTALRQ-LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPG 120
T+ ++ LG + L S +S ET RD LL + +E+++ S W+ ++ +PG
Sbjct: 67 TSVIKYWLGDSTTGLPSTRLSNRAAETFLRDALLNK-QLRIEIWKQDRSEWKCIRKASPG 125
Query: 121 NLGSYEDVLFANNEMQDTPVIVAL-FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
NL ED LF+++ M PV++A+ + +N L YV
Sbjct: 126 NLQEVEDFLFSSSHMTIAPVVIAVKYSISGDNKVYEKLIYV------------------- 166
Query: 180 NVESALVALGCKECLLPTEA-VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
+S ++ LG KECLL T K E ++ L RC V++TERKK EF +++ QDL+R
Sbjct: 167 --KSFIIQLGVKECLLHTSGNEKDYEGIKIKGILARCNVVVTERKKGEFDAKNIAQDLNR 224
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAM 298
LV G++ E L D++N+G Y ++ + L YMRLD +A+
Sbjct: 225 LVEGNLS----------------------IETLQDDANFGKYVLKHHDLSQYMRLDGSAL 262
Query: 299 RALNVLESKTDA-NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
ALN++ + +A NK+ SL+GL+N+ C G RL WLKQPLL++ EI
Sbjct: 263 AALNLMPTSNEAVNKSTSLYGLLNK-CKTAQGSRLFAQWLKQPLLNLEEIK--------- 312
Query: 358 VDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-- 414
LRQ L++ HLK I D+ RL +K A LQ +V++YQ IRLP + + L+
Sbjct: 313 -----LRQSLQEDHLKNIPDLHRLAKRFQKGTASLQDVVRVYQVVIRLPGLLTCLENKVS 367
Query: 415 -EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+ + ++LI + Y + L+ L+K LVET++DLD LEN EY+I + ++ L L
Sbjct: 368 EDVEKANLIDDLYTSKIRHLSG--LLHKLEELVETTIDLDALENHEYIIKAQFNDELQEL 425
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE-PKIRKKLTTQ 532
+++ L+R++ +++ +L L +DK LK ++ + +GH FR+ + E +IR K ++
Sbjct: 426 RSQTNELDREMVEEYRRVGENLCLELDKKLKFERHSLYGHCFRVVGRSEYTRIRNK--SE 483
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
+I T+K G F LK+L ++ + ++Y Q+ L V++ T+ +SL +
Sbjct: 484 YIQYTTQKSGTLFATRTLKELSSKHADISKKYDVKQRGLAREVVEIVATYCPSLESLGVL 543
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
+ SFA + PTPY RP + P G++ LE +RHPC+E QD+V FIPND L
Sbjct: 544 KLKCS---SFAHASVMAPTPYVRPTMFPLGQGNVALEDARHPCLEVQDYVTFIPNDVNLT 600
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
R +S QI+TGPNMGGKST+IRQVGV +LMAQ+G FVPC AS+ V D I ARVGAGD Q
Sbjct: 601 RDESELQIVTGPNMGGKSTYIRQVGVIVLMAQIGCFVPCTSASLCVFDSILARVGAGDSQ 660
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+GVSTFM EMLETA+ILK AT SL+IIDELGRGTSTYDG GLAWAI E++ IR+
Sbjct: 661 LKGVSTFMAEMLETATILKAATRNSLVIIDELGRGTSTYDGLGLAWAISEYIGTHIRSFC 720
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFG 832
LFATHFHELT L + + V N HV+ HI S +T+LYKV G D+SFG
Sbjct: 721 LFATHFHELTTLC---------QTVKHVKNMHVAVHI-GNSHDVTLLYKVNEGVGDKSFG 770
Query: 833 IHVAEFANFPESVVTLAREKAAEL----EDFTPSAV 864
IHVAE ANFPESVV LA+ KA EL E+ PS +
Sbjct: 771 IHVAELANFPESVVELAKRKADELDEESEEHKPSKI 806
>gi|14348673|gb|AAK61336.1|AF332582_1 mismatch repair protein Msh2p [Kluyveromyces lactis]
Length = 956
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 346/875 (39%), Positives = 510/875 (58%), Gaps = 64/875 (7%)
Query: 25 YKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTG---------SDAL 75
+ T +R D+ DYY G++A F+A YHT++ L+ + L
Sbjct: 23 FTTSQRSQNTIRLVDKSDYYIVVGDDALFVADQVYHTSSVLKDCKIDPSTLRQFDLQEPL 82
Query: 76 SSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEM 135
V++S + + + LLE +E+Y+ NW+L+K+ +PGNL +D++ + +
Sbjct: 83 KYVTMSIQIVGNLLKTSLLE-LGKKIEIYD---RNWKLLKTASPGNLEQVDDLIVGS--V 136
Query: 136 QDTPVIVALFPNFR----ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCK 191
+ V+ +L NF N CTIG+ +VD T +GL + LD+ F+N+ES L+ LG K
Sbjct: 137 ETNIVLASLKLNFNGTAASNYCTIGVSFVDNTNYRIGLFDLLDNEVFSNLESCLIQLGIK 196
Query: 192 ECLLPT---EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVR 248
ECL+P +++ K + + RC + + K ++F +D+ DL +L +
Sbjct: 197 ECLIPDLRDNPSMANDLKKILSVIDRCSCVASFVKPSDFNGKDVEADLAKLCGDELSLS- 255
Query: 249 DLVSGFEI-APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK 307
VS F GA LL+Y ++++E+N GN+ + +SL +++LD++A++ALNV +
Sbjct: 256 --VSKFSANCLGACSVLLNYLNIMNNEANVGNFEVVDHSLSQFVKLDASAIKALNVFPTG 313
Query: 308 TDAN----------KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
+ N K SLF L+NR C G RLL+ WLKQPL D+++I R D+V+ F
Sbjct: 314 SQGNTALLSVGSPQKCSSLFQLLNR-CKTNSGVRLLNEWLKQPLTDIDQITKRHDLVEFF 372
Query: 358 VDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG 416
+D LR L++ L + DI RL L+K L+ ++K+YQ + +P I L+Q
Sbjct: 373 MDQLELRSSLQEECLPSVPDIRRLTKKLQKN-GNLEDVLKIYQFAQMVPVISDLLKQKSE 431
Query: 417 QFSS-----LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE-NGEYMISSSYDTGL 470
+ S L+KE LDP+ L + + L K LVET+VDL+ E E+MI ++ L
Sbjct: 432 EVDSNDLMILVKEVLLDPM--LENANPLEKLKELVETTVDLEAYEETNEFMIKVEFNEQL 489
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
S ++ + L+ I ++H TA DL +K LKL+ G R+T+ + +R+
Sbjct: 490 SIIRTHLDELKDAIRTIHLDTADDLGFDPEKKLKLENHHLHGWCMRLTRNDAKALRQH-- 547
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
++I L T K G+ F+ +LK + ++ ++ ++Y+ Q LV ++ ++++ + + L+
Sbjct: 548 KKYIELSTVKAGIFFSTKELKNIAEETSELQKKYEQQQASLVKEIVSITLSYTPVLEKLS 607
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE--GSRHPCVEAQDWVNFIPND 648
+ ++LD+L SFA ++S P PY RP + P + + E SRHP VE QD V FI ND
Sbjct: 608 VVTAQLDILCSFAQVSSYAPIPYVRPKMYPLNDQNRTTELIASRHPIVEMQDDVTFISND 667
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
KL++G S F +ITGPNMGGKST+IRQ+GV LMAQ+G FVPCD A I+ D I RVGA
Sbjct: 668 VKLVQGDSEFIVITGPNMGGKSTYIRQIGVICLMAQIGCFVPCDEAKIAAVDAILCRVGA 727
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
GD QL+GVSTFM EMLETASILK AT SL+I+DELGRGTSTYDGFGLAW+I EH+ I
Sbjct: 728 GDSQLKGVSTFMMEMLETASILKNATHNSLVIVDELGRGTSTYDGFGLAWSISEHIATNI 787
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS----TSRKLTMLYKVEP 824
TLFATHFHELT LA + N V+N HV AHI+ S +T+LYKVE
Sbjct: 788 NCFTLFATHFHELTTLADKLDN---------VSNMHVVAHIEDNGSHNSDDITLLYKVEA 838
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
G+ DQSFGIHVAE FP +V +A+ KAAELED
Sbjct: 839 GSSDQSFGIHVAEVVQFPSKIVNMAKRKAAELEDL 873
>gi|363750187|ref|XP_003645311.1| hypothetical protein Ecym_2796 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888944|gb|AET38494.1| Hypothetical protein Ecym_2796 [Eremothecium cymbalariae
DBVPG#7215]
Length = 954
Score = 600 bits (1547), Expect = e-168, Method: Compositional matrix adjust.
Identities = 367/951 (38%), Positives = 549/951 (57%), Gaps = 74/951 (7%)
Query: 9 PELKL-DAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + RGF + LP ++ +R D+ +YYTA G++A ++A+ YHT++ L+
Sbjct: 6 PELKFTDVSEERGFYRRFANLPPKPSQTLRIVDKGEYYTAVGQDAIYVAENIYHTSSVLK 65
Query: 67 QLGTGS-------DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
+ + + L V++S + + + LLE+ +E+Y+ S W+L+K+ +P
Sbjct: 66 DMIADASVSKQIKEPLKYVTMSPQIISGLLKTCLLEQ-GFRIEIYDKS---WKLLKTASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVA---LFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +D++ N D+ V++A L N +E C +G+ ++D +GL + +D+
Sbjct: 122 GNIEEVDDLM---NVSLDSSVVLASIKLRLNSQEGHCVLGVSFLDSNSHKVGLLDIVDNE 178
Query: 177 HFTNVESALVALGCKECLLPTEAVKSS---ECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES ++ +G KECLLP S E K + + RCG ++T K +EF +++
Sbjct: 179 VYSNLESFIIQVGVKECLLPDMRNNDSTKGELKKITGVIDRCGSVVTFVKISEFNSKNTE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
DL +L + V L E++ A GALL+Y +L D SN G Y + ++SL +M+L
Sbjct: 239 SDLAKLCGDDL--VTSLPKFSELSLSATGALLNYMQLTKDVSNEGKYELIEHSLSQFMKL 296
Query: 294 DSAAMRALNV-----------LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
D++A++ALN+ + + T K S+F L+N+ C G RLL+ WLKQPL
Sbjct: 297 DASAIKALNIFANGSTAKPGLMNTSTSGGKITSIFQLLNK-CKTNAGVRLLNEWLKQPLC 355
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
D+ EI R D+V +D LR LR +L + D+ RL L K L+ ++K+YQ S
Sbjct: 356 DLAEIEKRHDLVDYLIDQLELRSLLRDDYLPLVPDMRRLTKKLSKN-GTLEDVLKVYQFS 414
Query: 402 IRLPYIRSALQQYEGQF--SSLIKERYLD----PLESLTDDDHLNKFIALVETSVDLDQL 455
R+P I S L++ SS IK+ +D PLE L KF ++ET+VDL+
Sbjct: 415 HRIPEINSVLKENLDDLPESSRIKKLVMDIWYHPLEESVHP--LFKFQEMIETTVDLETY 472
Query: 456 E-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
E N E+MI + ++ L+ K++ L+ + ++H A DL DK LKL+ G
Sbjct: 473 EENNEFMIKAEFNEELTQTKSQLVRLKDDMKTIHLDAADDLGFDPDKKLKLENHHVHGWC 532
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
R+T+ + +R+ +++ L T K G+ F+ +LK++ ++ + EEY Q LV
Sbjct: 533 MRLTRNDAKALRQH--RKYLELSTVKAGIYFSTKELKQISEEIATLQEEYDRQQSTLVKE 590
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD--IILEGSR 632
++ +T++ + + L+ +L+ LDVL SFA +AS P PY RP + P D L SR
Sbjct: 591 IVNITITYAPVLEKLSIILATLDVLCSFAHVASYAPIPYVRPKMYPMDSDQRKTKLIESR 650
Query: 633 HPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
HP VE QD V FI N+ L R +S F IITGPNMGGKST+IRQVGV LM+Q+G FVPCD
Sbjct: 651 HPLVEVQDDVTFIANNVILERQESEFLIITGPNMGGKSTYIRQVGVITLMSQIGCFVPCD 710
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
A I+V D I RVGAGD Q++GVSTFM EMLETASILK AT+ SLIIIDELGRGTSTYD
Sbjct: 711 SAEIAVSDAILCRVGAGDSQVKGVSTFMVEMLETASILKNATENSLIIIDELGRGTSTYD 770
Query: 753 GFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS- 811
GFGLAW+I E++++EI+ LFATHFHELT+LA + V N +V AHI+
Sbjct: 771 GFGLAWSISEYIIKEIKCFALFATHFHELTSLADDCPT---------VKNMNVIAHIEDG 821
Query: 812 --TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDA 869
S +T+LYKVE G DQSFGIHVAE FP+ ++ +A+ KA EL D+
Sbjct: 822 THISDDITLLYKVEQGISDQSFGIHVAEVVQFPDKILKMAKRKATEL----------DEL 871
Query: 870 KIEVGSKRKRISDPNDMSRGAARAHQFLKEFS-DMPLETMDLKEALERVKR 919
K + +K P +++G Q L+++ ++ E +D + E V+R
Sbjct: 872 KTDSEEIKKLKCSPEQIAQGTEVVKQVLQDWVLELRSENLDKRLDNEDVQR 922
>gi|281211524|gb|EFA85686.1| DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 850
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 358/947 (37%), Positives = 517/947 (54%), Gaps = 159/947 (16%)
Query: 16 KQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR--------- 66
K+ +GFL+FYK+L +RFFDR+ YY+ H ENA +IA ++ + AL+
Sbjct: 12 KEDKGFLAFYKSLDKSDNVIRFFDRKGYYSLHCENAVYIAMLHFKSMKALKYWTESITST 71
Query: 67 ----------------------------QLGTGSDALSSVSVSKNM-FETIARDLLLERT 97
Q +D + +++ + + FET+ + LL E+
Sbjct: 72 PLKKARTDTNLKTKPNVSLLSSSSSSSSQDNDSNDGYACLTIREGIEFETVCQKLLAEKL 131
Query: 98 DHTLELYEGSGS---NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCT 154
+E++ + W + +PGN+ +ED+L ++ ++VAL
Sbjct: 132 --RIEVWTPKPNRLNQWECSRHCSPGNMQMFEDIL----SVKGQSLMVALRVATVRGNRV 185
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
IG + D T + LG+ +F+D+ H +N+ S L+ +G KECL+ + K+ + K + + L
Sbjct: 186 IGAAFGDATLKSLGVLQFVDNEHLSNLGSFLLQMGVKECLIHIDD-KNVDNKKVVEKLQD 244
Query: 215 CGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDE 274
C + T+ +F +++ QDL RL+ GSV V + + E A +L L+ + ELL ++
Sbjct: 245 CDIPFTDVPNADFNVKNIEQDLTRLL-GSVNNVLNELEQ-EYAMQSLSCLIKHLELLCND 302
Query: 275 SNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
+G + + ++LDSYMR+DSA R LN++ K ++N+ C MG R L
Sbjct: 303 RYFGKFKLETFNLDSYMRMDSATFRGLNIINEK-ESNQ-----------CNTPMGSRKLS 350
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQ 393
W+KQPL+D EI RLD V+ F + LRQ LR + LK+I D++RL +A L+
Sbjct: 351 QWIKQPLVDSEEIEKRLDFVEIFTNSLELRQSLRGNDLKKICDLDRLSKRFVGSKANLED 410
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
V LY R+P + S+LQ Y+GQ + LI +++PL+S+ + ++++A+VE ++DLD
Sbjct: 411 CVNLYDIVQRMPVLVSSLQAYDGQCAELISSTFVEPLQSIVAN--FSQYLAMVEQTIDLD 468
Query: 454 QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGH 513
+ NE L R+ D+ L + F H
Sbjct: 469 R-------------------ANESHELSRK----------------DEKLISNASKYFTH 493
Query: 514 VFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVN 573
T KDGV+F+ T L++L D+ K ++Y Q+ LV+
Sbjct: 494 A-----------------------TNKDGVRFSTTDLRRLSDECGKWSKQYAESQQALVD 530
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRH 633
+ +Q A +F I L+ +++ LDV ++ A ++S PTP+ RP I P GD ++ G RH
Sbjct: 531 QALQVASSFVPIIDDLSYLIALLDVYVNLAHISSVAPTPFVRPKIFPMGTGDTVIIGGRH 590
Query: 634 PCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
PCVE QD VNFIPND +L R +S F +ITGPNMGGKSTFIRQVGV IL+AQ+G FVP +
Sbjct: 591 PCVEVQDGVNFIPNDIELNRERSQFHVITGPNMGGKSTFIRQVGVIILLAQIGCFVPAEE 650
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
ASISV DCI R+GAGD QLRGVSTFM EMLET+ ILK AT SLIIIDELGRGTSTYDG
Sbjct: 651 ASISVVDCILTRIGAGDSQLRGVSTFMAEMLETSYILKTATKNSLIIIDELGRGTSTYDG 710
Query: 754 FGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
FGLAW I E++ +I A LFATHFHELT LA + + V N HVSA+I T
Sbjct: 711 FGLAWGIAEYICNQIGAYCLFATHFHELTVLA---------ELIPVVNNLHVSANI--TD 759
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV 873
+LT+LYK+E G+CDQSFGIHVA A FPE V+ +AR KA+ELE F E
Sbjct: 760 NRLTLLYKIENGSCDQSFGIHVAIMAGFPEEVIEIARSKASELESF------------ES 807
Query: 874 GSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRM 920
S +K I HQFL+EF + L+ + L+ V +
Sbjct: 808 NSLKKNI-------------HQFLEEFKSLNLDENSPDKGLDMVNNL 841
>gi|320581420|gb|EFW95641.1| DNA mismatch repair protein MSH2 [Ogataea parapolymorpha DL-1]
Length = 938
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 338/879 (38%), Positives = 506/879 (57%), Gaps = 48/879 (5%)
Query: 9 PELKL--DAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D Q+ + +++ P R +R D+ +YY E+A +A Y T + ++
Sbjct: 6 PELKFADDRDQSSFYSKYFRLPPKSARTLRVVDKGEYYIVLDEDAELVADLIYKTQSVVK 65
Query: 67 QLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYE 126
+ +++S +F + + L++ + H LE+Y NW +++ +PGNL E
Sbjct: 66 TATAEKRTVQYITLSPAVFANLLK-LVVVDSGHKLEIY---SKNWDNMRTASPGNLSEIE 121
Query: 127 DVLFANNEMQDTPVIVAL-FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESAL 185
+ L ++ ++ AL + G +GL + D ++LG+ EF D+ F+N+E+ L
Sbjct: 122 E-LINTADLNAVSILAALKLVSSSSEGKKLGLSFYDPNAKILGVTEFYDNDLFSNLEALL 180
Query: 186 VALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVE 245
+ G KECL+P A + ++ + RC ++++E + +F +++ QD+ RL +
Sbjct: 181 IQTGVKECLVPASASSDPDMDKIKQLIDRCDIVVSEGRSADFSDKNIEQDVARLTGNELT 240
Query: 246 PVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE 305
+ +S + A+L Y LL+D+SN+G+ + KY L+ +M+LD AA+RA N+
Sbjct: 241 LSANELSSLHVGLACCNAILVYLSLLADQSNFGSINVVKYDLEQFMKLDYAAVRATNLFP 300
Query: 306 S---KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
NK SLFGL+N T G G RLL WLKQPL+DV EI R IV +DD
Sbjct: 301 PPNYNNTMNKTSSLFGLLNNCKTVG-GTRLLSQWLKQPLVDVQEIQNRHSIVGHLIDDLN 359
Query: 363 LRQDLR-QHLKRISDIERLMHNLEKRRA--GLQQIVKLYQSSIRLP----YIRSALQQYE 415
LR+ L+ Q L + DI RL+ L R L +++LYQ IRLP ++ +++ E
Sbjct: 360 LRESLQTQFLNEVPDISRLVKRLANPRGTKSLDDVIRLYQLCIRLPDLLDFLGTSMDSLE 419
Query: 416 GQ--FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGE------YMISSSYD 467
+ L +E +++P+ L+KF +VET+VDL+ L+N I+ +D
Sbjct: 420 PENAVRKLFQEFWIEPIAQYAG--ALSKFQEMVETTVDLESLDNASSAQGSMVAINPEFD 477
Query: 468 TGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRK 527
L + ++ E ++ Q+ H+ DL + +DK LKL+ G FR+T+ + IR
Sbjct: 478 ASLMEISHKIEQVKSQMRHEHELAGEDLGMELDKKLKLEIHHVHGWCFRLTRNDSSCIRG 537
Query: 528 KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFK 587
K ++ L T K GV FT ++L +L + + + E+Y N Q E+V ++ T+S IF
Sbjct: 538 K--KKYRELSTVKAGVYFTTSELSQLNSEVKSLEEQYDNGQSEVVKEIVTITATYSSIFL 595
Query: 588 SLATMLSELDVLLSFADLASSCPTPYTRPD----INPPDVGDIILEGSRHPCVEAQDWVN 643
L+ LS+LDVL+SFA + P PYTRP+ + P+ + L +RHPC+E QD ++
Sbjct: 596 KLSIELSKLDVLVSFAHTCAFAPVPYTRPEKIHGLGSPE-RRVRLREARHPCLEQQDGLS 654
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC-DRASISVRDCI 702
FIPND R F IITGPNMGGKST+IR +GV LM Q+G +VP + A + + D +
Sbjct: 655 FIPNDINFCRDSEEFLIITGPNMGGKSTYIRTMGVIALMNQIGCYVPAGEGAELCIFDSV 714
Query: 703 FARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICE 762
ARVGA D QL+GVSTFM EMLE +SILK AT SLII+DELGRGTSTYDGFGLAWAI E
Sbjct: 715 LARVGASDSQLKGVSTFMAEMLEMSSILKTATSNSLIIVDELGRGTSTYDGFGLAWAISE 774
Query: 763 HLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS--RKLTMLY 820
H+ +EIRA TLFATHF+ELTALA + V N V AH D++S + +T+LY
Sbjct: 775 HICKEIRAFTLFATHFYELTALA---------DKYTAVKNLQVVAHTDTSSDAKNITLLY 825
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
KVEPG DQSFG+HVAE FP ++ +A+ KA++L+D
Sbjct: 826 KVEPGVSDQSFGVHVAEIVKFPRKIIEMAKRKASDLDDI 864
>gi|45199121|ref|NP_986150.1| AFR603Cp [Ashbya gossypii ATCC 10895]
gi|44985261|gb|AAS53974.1| AFR603Cp [Ashbya gossypii ATCC 10895]
gi|374109382|gb|AEY98288.1| FAFR603Cp [Ashbya gossypii FDAG1]
Length = 956
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 363/936 (38%), Positives = 529/936 (56%), Gaps = 75/936 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK DA + RGF + +LP ++ +R DR +YYT G++A F+A+ YHT L+
Sbjct: 6 PELKFSDASEERGFYRRFASLPPKPSQTIRIVDRGEYYTILGQDAIFVAENVYHTQAVLK 65
Query: 67 QLGTGS-------DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
+ + V++S + ++ + LLE+ +E+Y+ S W+L+KS +P
Sbjct: 66 DFRVDAAVAKQLAEPTKYVTMSPQVIASLLKMALLEQ-GFKVEIYDRS---WKLLKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +D++ N D+ V++A N + C +G+ YVD +G+ + +D+
Sbjct: 122 GNIDQVDDLM---NVSVDSSVVLASVKFQFNASDGFCVLGVSYVDSNSYKIGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECLLP---TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N ES L+ LG KECLLP S+E K + + RCG ++T K +EF +D+
Sbjct: 179 VYSNFESFLIQLGVKECLLPDLRNNESFSAELKKVTGVIERCGCVVTFVKNSEFNNKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
DL +L E L ++A + AL+ Y +LL++ N G+Y I +YSL +M+L
Sbjct: 239 ADLAKLCGD--ELATSLPRFSKLALASCNALIGYQQLLNNAGNEGSYQIVEYSLSEFMKL 296
Query: 294 DSAAMRALNVL------ESKTDANKNF-------SLFGLMNRTCTAGMGKRLLHMWLKQP 340
D++A++AL++ +S + F SL L+N+ C G RLL+ WLKQP
Sbjct: 297 DASAVKALSIFPQGPSTQSGMATSGKFGGNGKITSLLQLLNK-CKTNAGVRLLNEWLKQP 355
Query: 341 LLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQ 399
L D I R ++V VD LR LR +L + D+ RL L R L+ ++K+YQ
Sbjct: 356 LSDKGSIEKRHNLVDYLVDQLELRSILRDDYLPLVPDVRRLTKKL-NRNGSLEDVLKVYQ 414
Query: 400 SSIRLPYIRSALQQ-----YEG-QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
+ R+P I L++ EG L+ E + +PL + L+KF +VET+VDL+
Sbjct: 415 FAQRIPEINGVLKENLDALSEGSHVKDLVLETWYNPLNEHVEP--LHKFQEMVETTVDLE 472
Query: 454 QLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFG 512
E E+MI ++ L+ ++ E L+ +I ++H T+ DL +K LKL+ G
Sbjct: 473 AYEETNEFMIKVEFNDELARIRTELVDLKDKIRTIHLDTSDDLGFDPEKKLKLENHHVHG 532
Query: 513 HVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV 572
R+T+ + +R+ +++ L T K G+ F+ +LK L D+ + ++Y Q LV
Sbjct: 533 WCMRLTRNDAKALRQH--KKYLELSTVKAGIYFSTKELKLLSDEIGTLQQDYDRKQSALV 590
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE--G 630
++ +++S + + L+ +L+ LDVL SFA ++S P PY RP + G +E
Sbjct: 591 KEIVTITLSYSPVLEKLSLVLANLDVLCSFAHVSSYAPIPYVRPVMYDMHAGQRKMELLA 650
Query: 631 SRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
SRHP VEAQD V FI ND L S F IITGPNMGGKST+IRQVGV L+AQ+G FVP
Sbjct: 651 SRHPLVEAQDEVTFISNDVVLEADSSGFAIITGPNMGGKSTYIRQVGVICLLAQIGCFVP 710
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
CD A I++ D I RVGAGD QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTST
Sbjct: 711 CDAAEITIVDAILCRVGAGDSQLKGVSTFMAEMLETASILRNATKNSLIIIDELGRGTST 770
Query: 751 YDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID 810
YDGFGLAW+I EH+ + I LFATHFHELTALA + N V N HV AH++
Sbjct: 771 YDGFGLAWSISEHIAKNIGCFALFATHFHELTALADDCPN---------VTNLHVVAHVE 821
Query: 811 STSRK---LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
S K +T+LYKVEPG DQSFGIHVAE FP +V +A+ KA EL D
Sbjct: 822 EKSHKSDDITLLYKVEPGISDQSFGIHVAEVVQFPSKIVKMAKRKATEL----------D 871
Query: 868 DAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM 903
D K E +K P +++G+ L+E++ +
Sbjct: 872 DIKEETECLKKLKCSPEHIAKGSEVLKNLLQEWASI 907
>gi|172002|gb|AAA34802.1| homologue of bacterial MutS protein [Saccharomyces cerevisiae]
Length = 966
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 360/947 (38%), Positives = 536/947 (56%), Gaps = 94/947 (9%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 QLGTGSDALSSVSVSKNMFE-----TIARDLLLERTD-------HTLELYEGSGSNWRLV 114
L V+ +KN E T++ +L + +E+Y+ W+L+
Sbjct: 66 NC-----QLDPVT-AKNFHEPTKYVTVSLQVLATLLKLCLLDLGYKVEIYD---KGWKLI 116
Query: 115 KSGTPGNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAE 171
KS +PGN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ +
Sbjct: 117 KSASPGNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLD 173
Query: 172 FLDDSHFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFK 228
+D+ ++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF
Sbjct: 174 IVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFS 233
Query: 229 TRDLVQDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSL 287
+D+ DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L
Sbjct: 234 EKDVELDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKL 291
Query: 288 DSYMRLDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMG 329
+M+LD++A++ALN+ S ++ K SLF L+N C G
Sbjct: 292 KEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAG 350
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRR 388
RLL+ WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR
Sbjct: 351 VRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR- 409
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKF 442
L+ ++K+YQ S R+P I + + L++ +L PL + L+KF
Sbjct: 410 GNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVNELVRSVWLAPLSHHVEP--LSKF 467
Query: 443 IALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDK 501
+VET+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK
Sbjct: 468 EEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDTLRDEIHSIHLDSAEDLGFDPDK 527
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LKL+ G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ +
Sbjct: 528 KLKLENHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQ 585
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
+EY Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P
Sbjct: 586 KEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPM 645
Query: 622 DVGD-IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
D L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV
Sbjct: 646 DSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVIS 705
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
LMAQ+G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII
Sbjct: 706 LMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLII 765
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
+DELGRGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ V
Sbjct: 766 VDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNV 816
Query: 801 ANYHVSAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
N HV AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA
Sbjct: 817 KNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKA 876
Query: 854 AELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
EL+D + AK+ + +++ G R LKE+
Sbjct: 877 NELDDLKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|6324482|ref|NP_014551.1| mismatch repair ATPase MSH2 [Saccharomyces cerevisiae S288c]
gi|2506880|sp|P25847.2|MSH2_YEAST RecName: Full=DNA mismatch repair protein MSH2; AltName: Full=MutS
protein homolog 2
gi|600468|emb|CAA58189.1| orf 00935 [Saccharomyces cerevisiae]
gi|1419934|emb|CAA99102.1| MSH2 [Saccharomyces cerevisiae]
gi|285814801|tpg|DAA10694.1| TPA: mismatch repair ATPase MSH2 [Saccharomyces cerevisiae S288c]
gi|392296738|gb|EIW07840.1| Msh2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 964
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 360/942 (38%), Positives = 535/942 (56%), Gaps = 84/942 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + L L + +E+Y+ W+L+KS +P
Sbjct: 66 NCQLDPVTAKNFHEPTKYVTVSLQV-LATLLKLCLLDLGYKVEIYD---KGWKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR L+
Sbjct: 356 EWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR-GNLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S R+P I + + L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVNELVRSVWLAPLSHHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKVEFNEELGKIRSKLDTLRDEIHSIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD- 625
Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 591 QQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERR 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV LMAQ+
Sbjct: 651 THLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ V N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNVKNMHV 821
Query: 806 SAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ AK+ + +++ G R LKE+
Sbjct: 882 LKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|349581080|dbj|GAA26238.1| K7_Msh2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 964
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 360/942 (38%), Positives = 534/942 (56%), Gaps = 84/942 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + L L + +E+Y+ W+L+KS +P
Sbjct: 66 NCQLDPVTAKNFHEPTKYVTVSLQV-LATLLKLCLLDLGYKVEIYD---KGWKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR L+
Sbjct: 356 EWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR-GNLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S R+P I + L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVRSVWLAPLSHHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEIHSIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG-D 625
Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 591 QQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERK 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV LMAQ+
Sbjct: 651 THLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ V N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNVKNMHV 821
Query: 806 SAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ AK+ + +++ G R LKE+
Sbjct: 882 LKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|440803775|gb|ELR24658.1| DNA mismatch repair protein msh2, putative [Acanthamoeba
castellanii str. Neff]
Length = 961
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 364/949 (38%), Positives = 523/949 (55%), Gaps = 108/949 (11%)
Query: 43 YYTAHGENATFIAKTYYHTTTALRQLGT----GSDALSSVSVSKNMFETIARDLLLERTD 98
Y+TAHGE+A IA YYHTT A+ LG G + S ++S ++F I RDLL+ + +
Sbjct: 22 YHTAHGEDALLIANDYYHTTDAITYLGAEGPDGRGGIPSQAISPSLFVDIVRDLLVNKRN 81
Query: 99 HTLELY-------EGSGSNWRLVKSGTPGNLGSYEDVLFANN---EMQDTPVIVALFPNF 148
+E++ + + +NW+++K +PGN+ +ED++F ++ D P+ +AL F
Sbjct: 82 R-IEVWAVPTGGPKNTQNNWQIIKRASPGNIHDFEDLMFQDDVGAAGADNPITLALQFGF 140
Query: 149 RENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV--------------------------- 181
++ +G ++DL R L + EF+DD H +NV
Sbjct: 141 KDGQRMVGAAFIDLNTRTLNVCEFIDDDHLSNVYVSLYHAQDALERLWTDVGRHIYAPCH 200
Query: 182 ---ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKT------------- 225
ES +V +G ECLL E +E + L C V+ T ++K
Sbjct: 201 DRSESLVVQVGATECLLAQE--DEAETTRILTVLEACNVLDTPKRKGGDHATHQFSVRRG 258
Query: 226 EFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKY 285
EF L QDL L+ + A GA L+ + ELLSD +N ++++ +
Sbjct: 259 EFAIHTLEQDLTTLLALPPLQHNYDEMQKQFAMGAAACLIRHFELLSDSNNINKWHLKSH 318
Query: 286 SLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVN 345
+ YMRLD A L+++ + ++ SLF L+N C MG R L W+KQ
Sbjct: 319 NFGQYMRLDRTAFVTLHLIPEGKE-KRSMSLFSLLNH-CRTPMGSRRLVQWIKQ------ 370
Query: 346 EINARLDIVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+IV+ F DD LR L+++L KR+ D+ RLM + K AGLQ I++LYQ +L
Sbjct: 371 ------NIVELFFDDHELRGTLQENLLKRVPDVNRLMRKIVKGNAGLQDILRLYQFVEKL 424
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
I AL Y G+ LI +Y +PL L + +F A+VET VDL ++ EY I
Sbjct: 425 VGIHMALSFYAGEHKDLITAKYEEPLAELIES--FKQFEAMVETMVDLSLIDQHEYRIRP 482
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
+D L + ++++ L + A DL L K LKL+ G+ FR+T + E
Sbjct: 483 DFDDDLKEFYKGLQKSKQKMEDLRSRIADDLKLD-SKELKLESSKHVGYFFRLTARNEKL 541
Query: 525 IRKKLTTQFIVLE-TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
IR + FI +E +KDGVKF N+ L +L + Y+K Y+ Q ++V V+ T T+
Sbjct: 542 IRNR--KDFIRVEGQKKDGVKFRNSDLHRLNEDYKKFNRSYEQKQAQIVASVVTTTSTYQ 599
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN 643
+ + + ++++LD +S A ++++ YTRP + P VGDII++GSRHPC+E D +N
Sbjct: 600 QPMERASEIIADLDAFVSMAHVSANWR--YTRPQLTEPGVGDIIIKGSRHPCLETMDQIN 657
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
FI ND L R +S QIITGPNMGGKST+IRQV + +LMAQ+G FVP + ASIS+ D I
Sbjct: 658 FIANDVNLTR-ESRVQIITGPNMGGKSTYIRQVAMVVLMAQMGCFVPAESASISIVDAIL 716
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
RVGAGD QLRG+STFM EMLETA+IL+ AT +SLI IDELGRGTSTYDGFGLAWAI H
Sbjct: 717 VRVGAGDSQLRGISTFMAEMLETAAILRSATSKSLICIDELGRGTSTYDGFGLAWAISRH 776
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR--KLTMLYK 821
+ +EI+A LFATHFHELT+LA E + VAN HV+A + LT LY+
Sbjct: 777 IAKEIKAFCLFATHFHELTSLADE---------IPHVANLHVTAQTGDEDKLADLTFLYQ 827
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF----------TPSAVISDDAKI 871
+ PGACDQSFGIHVA+ NFPE +V +A KAAELE F +PS +++ K
Sbjct: 828 IRPGACDQSFGIHVAKMTNFPEEIVKVAEAKAAELESFDTVLVKEHQLSPSKRLANKGKQ 887
Query: 872 ---EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERV 917
E S + +D A A + L++ L+ + EA+E++
Sbjct: 888 KADEASSPAAQDQSSSDADELAGVAERLLQDMEVAGLDQLPRAEAMEKI 936
>gi|365758493|gb|EHN00331.1| Msh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 964
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 361/946 (38%), Positives = 538/946 (56%), Gaps = 92/946 (9%)
Query: 9 PELKL-DAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + ++ +R D+ +YYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYVGLPKEPSKTIRLVDKGEYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 QLGTGSDALSSVSVSK----NMFETIARDLLLERTD-------HTLELYEGSGSNWRLVK 115
L ++ K + + T++ +L + +E+Y+ S W+L+K
Sbjct: 66 NC-----QLDPITAKKFDEPSKYVTVSLQVLATLLKLCLLDLGYKVEIYDRS---WKLIK 117
Query: 116 SGTPGNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEF 172
S +PGN+ +++ N D+ +++A N ++ C IG+ ++D T +G+ +
Sbjct: 118 SASPGNIEQVSELMNMN---IDSSIVIASLKVQWNSQDGNCVIGIAFIDTTAYKVGMLDI 174
Query: 173 LDDSHFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKT 229
+D+ ++N+ES L+ LG KECL L + ++E + + + L RC ++T + TEF
Sbjct: 175 VDNEVYSNLESFLIQLGVKECLVQDLTSNPNSNTEIQKVINVLDRCECVITLLRNTEFSE 234
Query: 230 RDLVQDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLD 288
+D+ DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L
Sbjct: 235 KDVELDLIKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLK 292
Query: 289 SYMRLDSAAMRALNVLE--------SKTDANKNF----------SLFGLMNRTCTAGMGK 330
+M+LD++A++ALN+ S T A F SLF L+N C G
Sbjct: 293 EFMKLDASAIKALNLFPQGPQNPFGSNTLAVSGFTNAGNTGKITSLFHLLNH-CRTNAGV 351
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRA 389
RLL+ WLKQPL +++EI R D+V +D LRQ L L I DI RL L KR
Sbjct: 352 RLLNEWLKQPLTNIDEITKRHDLVDYLIDQIELRQMLTTDFLPMIPDIRRLTKKLNKR-G 410
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQY--EGQFSSLIKE----RYLDPLESLTDDDHLNKFI 443
L+ ++K+YQ S ++P I + + EG + +KE +L PL + L+KF
Sbjct: 411 SLEDVLKIYQFSKKIPEIVNLFNSFLEEGSLAESLKELVCSTWLAPLSHHVEP--LSKFE 468
Query: 444 ALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
+VET+VDLD E N E+MI ++ L+ ++N+ ++L +IHS+H +A DL DK
Sbjct: 469 EMVETTVDLDAYEENNEFMIKIEFNEELTKIRNKLDALREEIHSIHLDSAEDLGFDPDKK 528
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
LKL+ G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +
Sbjct: 529 LKLENHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQK 586
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
EY Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 587 EYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVISSFAHTSSYAPIPYIRPKLHPMD 646
Query: 623 VG-DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV L
Sbjct: 647 SERKTHLVNSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISL 706
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+
Sbjct: 707 MAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIV 766
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTSTYDGFGLAWAI EH+ ++I LFATHFHELT L ++++ V
Sbjct: 767 DELGRGTSTYDGFGLAWAIAEHIADKIGCFALFATHFHELTEL---------SEKLPNVK 817
Query: 802 NYHVSAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
N HV AHI+ S + +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA
Sbjct: 818 NMHVVAHIEKNSNEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKAN 877
Query: 855 ELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
EL+D + AK+ + +++ G R LKE+
Sbjct: 878 ELDDLKTTNENLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|323352314|gb|EGA84849.1| Msh2p [Saccharomyces cerevisiae VL3]
Length = 964
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 360/942 (38%), Positives = 534/942 (56%), Gaps = 84/942 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + L L + +E+Y+ W+L+KS +P
Sbjct: 66 NCQLDPVTAKNFHEPTKYVTVSLQV-LATLLKLCLLDLGYKVEIYD---KGWKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR L+
Sbjct: 356 EWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR-GNLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S R+P I + L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVRSVWLAPLSHHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEIHSIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD- 625
Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 591 QQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERR 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV LMAQ+
Sbjct: 651 THLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ V N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNVKNMHV 821
Query: 806 SAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ AK+ + +++ G R LKE+
Sbjct: 882 LKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|401840373|gb|EJT43216.1| MSH2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 964
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 361/946 (38%), Positives = 538/946 (56%), Gaps = 92/946 (9%)
Query: 9 PELKL-DAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + ++ +R D+ +YYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYVGLPKEPSKTIRLVDKGEYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 QLGTGSDALSSVSVSK----NMFETIARDLLLERTD-------HTLELYEGSGSNWRLVK 115
L ++ K + + T++ +L + +E+Y+ S W+L+K
Sbjct: 66 NC-----QLDPITAKKFDEPSKYVTVSLQVLATLLKLCLLDLGYKVEIYDRS---WKLIK 117
Query: 116 SGTPGNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEF 172
S +PGN+ +++ N D+ +++A N ++ C IG+ ++D T +G+ +
Sbjct: 118 SASPGNIEQVSELMNMN---IDSSIVIASLKVQWNSQDGNCVIGIAFIDTTAYKVGMLDI 174
Query: 173 LDDSHFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKT 229
+D+ ++N+ES L+ LG KECL L + ++E + + + L RC ++T + TEF
Sbjct: 175 VDNEVYSNLESFLIQLGVKECLVQDLTSNPNSNTEIQKVINVLDRCECVVTLLRNTEFSE 234
Query: 230 RDLVQDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLD 288
+D+ DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L
Sbjct: 235 KDVELDLIKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHRLK 292
Query: 289 SYMRLDSAAMRALNVLE--------SKTDANKNF----------SLFGLMNRTCTAGMGK 330
+M+LD++A++ALN+ S T A F SLF L+N C G
Sbjct: 293 EFMKLDASAIKALNLFPQGPQNPFGSNTLAVSGFTNAGNTGKITSLFHLLNH-CRTNAGV 351
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRA 389
RLL+ WLKQPL +++EI R D+V +D LRQ L L I DI RL L KR
Sbjct: 352 RLLNEWLKQPLTNIDEITKRHDLVDYLIDQIELRQMLTTDFLPMIPDIRRLTKKLNKR-G 410
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQY--EGQFSSLIKE----RYLDPLESLTDDDHLNKFI 443
L+ ++K+YQ S ++P I + + EG + +KE +L PL + L+KF
Sbjct: 411 SLEDVLKIYQFSKKIPEIVNLFNSFLEEGSLAESLKELVCSTWLAPLSHHVEP--LSKFE 468
Query: 444 ALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
+VET+VDLD E N E+MI ++ L+ ++N+ ++L +IHS+H +A DL DK
Sbjct: 469 EMVETTVDLDAYEENNEFMIKIEFNEELAKIRNKLDALREEIHSIHLDSAEDLGFDPDKK 528
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
LKL+ G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +
Sbjct: 529 LKLENHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQK 586
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
EY Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 587 EYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVISSFAHTSSYAPIPYIRPKLHPMD 646
Query: 623 VG-DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV L
Sbjct: 647 SERKTHLVNSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISL 706
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+
Sbjct: 707 MAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIV 766
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTSTYDGFGLAWAI EH+ ++I LFATHFHELT L ++++ V
Sbjct: 767 DELGRGTSTYDGFGLAWAIAEHIADKIGCFALFATHFHELTEL---------SEKLPNVK 817
Query: 802 NYHVSAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
N HV AHI+ S + +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA
Sbjct: 818 NMHVVAHIEKNSNEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKAN 877
Query: 855 ELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
EL+D + AK+ + +++ G R LKE+
Sbjct: 878 ELDDLKTTNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|190407259|gb|EDV10526.1| DNA mismatch repair protein MSH2 [Saccharomyces cerevisiae RM11-1a]
gi|323335633|gb|EGA76916.1| Msh2p [Saccharomyces cerevisiae Vin13]
Length = 964
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 360/942 (38%), Positives = 534/942 (56%), Gaps = 84/942 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + L L + +E+Y+ W+L+KS +P
Sbjct: 66 NCQLDPVTAKNFHEPTKYVTVSLQV-LATLLKLCLLDLGYKVEIYD---KGWKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR L+
Sbjct: 356 EWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR-GNLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S R+P I + L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVRSVWLAPLSHHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEIHSIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD- 625
Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 591 QQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERR 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV LMAQ+
Sbjct: 651 THLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ V N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNVKNMHV 821
Query: 806 SAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ AK+ + +++ G R LKE+
Sbjct: 882 LKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|151945544|gb|EDN63785.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
Length = 964
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 359/942 (38%), Positives = 535/942 (56%), Gaps = 84/942 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + T L L + +E+Y+ W+L+KS +P
Sbjct: 66 NCQLDPVTAKNFHEPTKYVTVSLQVLAT-LLKLCLLDLGYKVEIYD---KGWKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECLL---PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECLL + + ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLLQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR L+
Sbjct: 356 EWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR-GNLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S R+P I + L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVRSVWLAPLSHHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEIHSIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD- 625
Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 591 QQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERR 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQ+GV LMAQ+
Sbjct: 651 THLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQIGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ + N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNIKNMHV 821
Query: 806 SAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ AK+ + +++ G R LKE+
Sbjct: 882 LKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|156841571|ref|XP_001644158.1| hypothetical protein Kpol_1053p38 [Vanderwaltozyma polyspora DSM
70294]
gi|156114794|gb|EDO16300.1| hypothetical protein Kpol_1053p38 [Vanderwaltozyma polyspora DSM
70294]
Length = 959
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 370/977 (37%), Positives = 560/977 (57%), Gaps = 88/977 (9%)
Query: 9 PELKLDA-KQARGFLSFYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
PELK A + GF + +LP DT +R DR +YYT G +A F+A+ YHT + L
Sbjct: 6 PELKFAAVSEEHGFYRRFVSLPEKPDT-TLRIVDRGEYYTVVGSDAIFVAENVYHTQSVL 64
Query: 66 RQLGTG-------SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGT 118
+ + L V++S + ++ + L++ + +E+Y+ S W+++K+ +
Sbjct: 65 KNCNVDPSVAKRFNQPLQYVTMSPQVVSSLLKTCLVDLA-YKVEIYDKS---WKMLKTAS 120
Query: 119 PGNLGSYEDVLFANNEMQDTPVIVALFP--NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
PGN+ D++ N + + VI A+ P N ++ C +G+ ++D + +G+ + +D+
Sbjct: 121 PGNIEQVSDLMNIN--VDTSIVIAAIKPQLNSQDGNCLLGVTFIDTSNYKIGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECLLPTEAVKS----SECKTLRDALTRCGVMLTERKKTEFKTRDL 232
++N+ES L+ LG +ECLLP + KS +E K + + RCG + T + ++F +D
Sbjct: 179 VYSNLESFLIQLGVRECLLP-DLTKSEGNMNEIKKITGVIDRCGCVATFVRNSDFSDKDS 237
Query: 233 VQDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
DL +L+ E L F + A + AL+ Y ELL ++ G Y + ++SL M
Sbjct: 238 ESDLAKLIGD--ELSISLPQKFSKFALSSFNALVHYLELLQEQDQLGKYELIQHSLKELM 295
Query: 292 RLDSAAMRALNVLE---------------SKTDANKNFSLFGLMNRTCTAGMGKRLLHMW 336
+LD++AM+ALN+ S ++++K SLF L+N C G RLL+ W
Sbjct: 296 KLDASAMKALNLFPATSSQSIVPLLTAGYSNSNSSKVTSLFQLLNH-CKTNAGVRLLNEW 354
Query: 337 LKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIV 395
+KQPL + EI R D+V+ +D LRQ L+ L + DI R+ L K L+ I+
Sbjct: 355 IKQPLTSLAEITKRHDLVEYLIDQLELRQILQTDFLPVVPDIRRITKKLNKN-GNLEDIL 413
Query: 396 KLYQSSIRLPYIRSALQ------QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
KLYQ I++P I L+ Q + +L+KE +LDP+ S T L+K +VET+
Sbjct: 414 KLYQFCIKIPEISKTLESFLEDSQTDENIKTLVKESWLDPMLSYTSP--LSKLQEMVETT 471
Query: 450 VDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKG 508
VDLD E + E+MI ++ L+ ++ E + + QIH+ H Q + DL DK LKL+
Sbjct: 472 VDLDAYEEHNEFMIKVEFNEELAKIRQELDMMRDQIHTAHIQASEDLGFDPDKKLKLENH 531
Query: 509 TQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
G R+T+ + ++RK ++I L T K G+ F+ ++L+++ + + +EY Q
Sbjct: 532 HLHGWCMRLTRNDGKELRKH--EKYIELSTVKAGIYFSTSELREVARETSLLQKEYDRQQ 589
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD--- 625
LV ++ +T++ + + ++ +L+ LDV+ SFA +S PY RP + D+G
Sbjct: 590 SALVKEIVNITLTYTPVLEKISIILANLDVICSFAHASSYAVIPYIRPKMY--DIGSERK 647
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD + FI ND L +G S F IITGPNMGGKST+IRQVGV LMAQ+
Sbjct: 648 TRLISSRHPVLEMQDDLTFIANDVNLEKGTSDFLIITGPNMGGKSTYIRQVGVITLMAQI 707
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPCD A I++ D I RVGAGD QL+GVSTFM EMLETASILK A+ SLIIIDELG
Sbjct: 708 GCFVPCDEADIAIVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNASTNSLIIIDELG 767
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI E + +I+ LFATHFHELT+L+ + + N K M VA H+
Sbjct: 768 RGTSTYDGFGLAWAISEFIASQIKCFALFATHFHELTSLSDKLS---NVKNMQVVA--HI 822
Query: 806 SAHIDSTSRK--LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
+ DS K +T+LYKVEPG DQSFGIHVAE FP+ +V +A+ K ELED
Sbjct: 823 EQNADSNQDKDDITLLYKVEPGVSDQSFGIHVAEVVQFPDKIVKMAKRKVEELEDLK--- 879
Query: 864 VISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD-MPLETMDL---------KEA 913
DA ++ K+ R+S P +++ G + LKE+S+ + LE +++ +
Sbjct: 880 ----DANEKL--KKTRLS-PKEINEGNNELKKILKEWSEKIKLEGIEITKLTDQDCQQRI 932
Query: 914 LERVKRMKDDLEKDAGD 930
E +K + + EK+ G+
Sbjct: 933 TELLKNVTQESEKNHGE 949
>gi|259149396|emb|CAY86200.1| Msh2p [Saccharomyces cerevisiae EC1118]
Length = 964
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 360/942 (38%), Positives = 535/942 (56%), Gaps = 84/942 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + T L L + +E+Y+ W+L+KS +P
Sbjct: 66 NCQLDPVTAKNFHEPTKYVTVSLQVLAT-LLKLCLLDLGYKVEIYD---KGWKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR L+
Sbjct: 356 EWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR-GNLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S R+P I + L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVRSVWLAPLSHHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEIHSIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD- 625
Q LV +I +T++ +F+ ++ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 591 QQSALVREIINITLTYTPVFEKISLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERR 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV LMAQ+
Sbjct: 651 THLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ V N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNVKNMHV 821
Query: 806 SAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ AK+ + +++ G R LKE+
Sbjct: 882 LKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|296223913|ref|XP_002757838.1| PREDICTED: DNA mismatch repair protein Msh2 [Callithrix jacchus]
Length = 841
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 322/723 (44%), Positives = 457/723 (63%), Gaps = 34/723 (4%)
Query: 212 LTRCGVMLTERKKTEFKTRDLVQDLDRLVRG--------SVEPVRDLVSGFEIAPGALGA 263
+ R G+++TE+KK +F T+D+ QDL+RL++G +V P + ++A +L A
Sbjct: 124 IQRGGILITEKKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEME----NQVAVSSLSA 179
Query: 264 LLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE-SKTDANKNFSLFGLMNR 322
++ + ELLSD+SN+G + + + YM+LD AA+RALN+ + S D + SL L+N+
Sbjct: 180 VIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGSQSLAALLNK 239
Query: 323 TCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL-KRISDIERLM 381
C G+RL++ W+KQPLLD N I RL++V+AFV+D LRQ L++ L +R D+ RL
Sbjct: 240 -CKTPQGQRLVNQWIKQPLLDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLA 298
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNK 441
++ A LQ +LYQ +LP + AL++YEG+ L+ ++ PL L D +K
Sbjct: 299 KKFLRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQKLLLAVFVTPLTDLRSD--FSK 356
Query: 442 FIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDK 501
F ++ET++D+DQ+EN E+++ S+D LS L+ LE+++ S A DL L K
Sbjct: 357 FQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGK 416
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
+KLD QFG+ FR+T KEE +R F ++ +K+GVKFTN+KL L ++Y K
Sbjct: 417 QIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNK 474
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EY+ Q +V ++ + + E ++L +L++LD ++SFA +++ P PY RP I
Sbjct: 475 TEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPVILEK 534
Query: 622 DVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
G IIL+ SRH CVE QD V FIPND + K F IITGPNMGGKST+IRQ GV +L
Sbjct: 535 GQGRIILKASRHACVEVQDEVAFIPNDVYFEKNKQMFHIITGPNMGGKSTYIRQTGVIVL 594
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETASIL+ AT SLIII
Sbjct: 595 MAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIII 654
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTSTYDGFGLAWAI E++ +I A +FATHFHELTALA+ Q+ V
Sbjct: 655 DELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN---------QIPTVN 705
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP 861
N HV+A +T LTMLY+V+ G CDQSFGIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 706 NLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQY 763
Query: 862 SAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMK 921
+E +KR + + +G +FL + MP M + ++K++K
Sbjct: 764 IGESQGYDDMEPAAKRCFL----EREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLK 819
Query: 922 DDL 924
++
Sbjct: 820 AEV 822
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YT HGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTVHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN 110
G+ L SV +SK FE+ +DLLL R + +E+Y+ N
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGN 109
>gi|256271408|gb|EEU06469.1| Msh2p [Saccharomyces cerevisiae JAY291]
Length = 964
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 358/942 (38%), Positives = 535/942 (56%), Gaps = 84/942 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + T L L + +E+Y+ W+L+KS +P
Sbjct: 66 NCQLDPVTAKNFHEPTKYVTVSLQVLAT-LLKLCLLDLGYKVEIYD---KGWKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECLL---PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECLL + + ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLLQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL +++EIN R D+V +D +RQ L ++L I DI RL L KR L+
Sbjct: 356 EWLKQPLTNIDEINKRHDLVDYLIDQIEVRQMLTSEYLPMIPDIRRLTKKLNKR-GNLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S R+P I + L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVRSVWLAPLSHHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEIHSIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD- 625
Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 591 QQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERR 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQ+GV LMAQ+
Sbjct: 651 THLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQIGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ + N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNIKNMHV 821
Query: 806 SAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ AK+ + +++ G R LKE+
Sbjct: 882 LKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|410077361|ref|XP_003956262.1| hypothetical protein KAFR_0C01330 [Kazachstania africana CBS 2517]
gi|372462846|emb|CCF57127.1| hypothetical protein KAFR_0C01330 [Kazachstania africana CBS 2517]
Length = 960
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 356/907 (39%), Positives = 518/907 (57%), Gaps = 65/907 (7%)
Query: 9 PELKL-DAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + RGF + +LP + +R D+ +YYT G +A F+A+ YHT + L+
Sbjct: 6 PELKFSDVSEERGFYRRFNSLPEKPSTKIRIVDKGEYYTVVGSDAVFVAENIYHTQSVLK 65
Query: 67 QL--------GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGT 118
G ++ V++S+ + + + LL+ + + +E+Y+ NW+L+KS +
Sbjct: 66 NCNVDQITLKGFKNEPPQYVTISQQVLSNLLKVCLLD-SGYKVEIYD---KNWKLLKSAS 121
Query: 119 PGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHF 178
PGN+ +++ N E + L N ++ IG+ ++D + +G+ + +D+ +
Sbjct: 122 PGNIEQVSELMNLNIEQSIVIASLKLQQNSKDGNNVIGVAFIDTSNFKIGMLDIVDNEVY 181
Query: 179 TNVESALVALGCKECLLPTEAVKSS---ECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
+NVES L+ LG KECL+ + + E K L + RC + + K +EF +D+ D
Sbjct: 182 SNVESFLIQLGVKECLIQDQRSNENSAVEFKKLVSVIERCDCVASLLKNSEFSEKDVELD 241
Query: 236 LDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L +L+ E L + I+ GA ALL Y +L+++E G Y + ++SL +M+LD
Sbjct: 242 LVKLLGD--ELALSLPQKYSNISMGACNALLKYLQLVTEEEQIGKYELVEHSLKEFMKLD 299
Query: 295 SAAMRALNVL---------------ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQ 339
++A++ALN+ S + K SLF L+N C G RLL+ WLKQ
Sbjct: 300 ASAIKALNLFPQGPLQALGPSSIISMSPSSGGKIESLFQLLN-NCKTNAGIRLLNEWLKQ 358
Query: 340 PLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLY 398
PL D+N IN R D+V+ +D LR L+ L I D+ R+ L K+ GL+ ++K+Y
Sbjct: 359 PLTDLNLINQRHDLVEFLIDQLELRNMLQSDFLPLIPDVRRITKKLSKK-GGLEDVLKVY 417
Query: 399 QSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDL 452
Q S R+P I L+ + + +SLI +L PL+S D L+K +VET+VDL
Sbjct: 418 QFSKRVPEIAQLLESFVQDTDISEEMNSLINATWLTPLKSHLDP--LSKLQEMVETTVDL 475
Query: 453 DQL-ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF 511
+ E+ YMI ++ L++++N+ +SL +I ++H A DL ++ LKL+
Sbjct: 476 EAYDESNVYMIKVEFNEELASIRNKLDSLRDEIKTIHLDAAEDLGFDPERKLKLENHHLH 535
Query: 512 GHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKEL 571
G R+T+ + ++RK +I L T K G+ F+ +LK++ ++ + +EY Q L
Sbjct: 536 GWCMRLTRNDAKELRKH--KNYIELSTVKAGIFFSTRELKEIANETAILQKEYDKQQSTL 593
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI-NPPDVGDIILEG 630
V ++ +T++ + + L+ +L+ LDVL SFA +S P PY RP + L G
Sbjct: 594 VKEIVNITLTYTPVLEKLSLVLANLDVLSSFAHTSSYAPIPYVRPKMYGFGSTRKTKLLG 653
Query: 631 SRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
SRHP +E QD + FI ND L G F IITGPNMGGKST+IRQVGV LMAQ+G FVP
Sbjct: 654 SRHPVLEMQDELTFIANDVVLENGTGEFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVP 713
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
CD+A IS+ D I RVGAGD QL+GVSTFM EMLETASILK +T SLIIIDELGRGT T
Sbjct: 714 CDKAEISIVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNSTKNSLIIIDELGRGTGT 773
Query: 751 YDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID 810
YDGFGLAWAI EH+ I LFATHFHELT LA + AN V N HV AHI+
Sbjct: 774 YDGFGLAWAIAEHIAANIGCFALFATHFHELTTLADKLAN---------VKNMHVVAHIE 824
Query: 811 ST------SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
+ S +T+LYKVEPG DQSFGIHVAE FP+ ++ +A+ KA ELED S
Sbjct: 825 QSESSHHDSDDITLLYKVEPGISDQSFGIHVAEVVQFPDKIIRMAKRKADELEDLKKSNG 884
Query: 865 ISDDAKI 871
AKI
Sbjct: 885 ELKKAKI 891
>gi|367013624|ref|XP_003681312.1| hypothetical protein TDEL_0D05170 [Torulaspora delbrueckii]
gi|359748972|emb|CCE92101.1| hypothetical protein TDEL_0D05170 [Torulaspora delbrueckii]
Length = 962
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 356/899 (39%), Positives = 523/899 (58%), Gaps = 72/899 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK D + RGF + +LP + VR D+ DYYT GE+A F+A YHT + L+
Sbjct: 6 PDLKFSDISEERGFYKRFVSLPEKPSSTVRIVDKGDYYTVIGEDAHFVADNVYHTQSVLK 65
Query: 67 QLGTGS-------DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
+ V+VS + ++ + LL+ ++ +E+Y+ S W+L+KS +P
Sbjct: 66 DCKVDGVVAKEFKGPMKYVTVSPQVASSLLKTCLLD-LNYKVEIYDKS---WKLLKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVA---LFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +D++ N D+ +++A L N +E C IG+ +VD + +G+ + +D+
Sbjct: 122 GNIEQVQDIM---NVAVDSSIVMASLKLQFNSQEGFCVIGVSFVDTSDYKIGMLDIIDNE 178
Query: 177 HFTNVESALVALGCKECLLPTEAVK---SSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
F+N+ES L+ LG +ECLLP + +SE K + + RC + T K +F +++
Sbjct: 179 VFSNLESFLIQLGVRECLLPDLSKNENLNSEMKKICSVIERCNCVATFIKSQDFSEKNVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
DL +LV E L +A GA GALL Y +LLSD+ G Y + ++SL+ +++L
Sbjct: 239 IDLTKLVGD--ELSLSLSKYSNLALGACGALLGYLQLLSDQDQIGKYEVMQHSLEEFIKL 296
Query: 294 DSAAMRALNVLESK-------TDANKNF-----------SLFGLMNRTCTAGMGKRLLHM 335
D++A++ALN+ + N +F SLF L+N C G RLL+
Sbjct: 297 DASAIKALNLFPQNNSQSLTISGPNASFGSLGSNRSKITSLFQLLN-NCKTNAGVRLLNE 355
Query: 336 WLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQI 394
WLKQPL DV +I R +V+ +D LRQ L+ +L I D+ R+ L + L+ +
Sbjct: 356 WLKQPLTDVEKITKRHILVEYLIDQLELRQMLQSDYLPAIPDVRRITKKL-MGSSNLEGV 414
Query: 395 VKLYQSSIRLPYIRSALQ------QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET 448
+K+YQ ++P I L+ Q + + +LIK +LDPL L L +VET
Sbjct: 415 LKIYQFCKKIPEITQLLESFLSDDQVQNEVKNLIKAVWLDPL--LAQTGPLASLEEMVET 472
Query: 449 SVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDK 507
+VDL+ E + EYMI ++ L+ ++++ +SL QI+++H ++A DL +K LKL+
Sbjct: 473 TVDLEVFEQSNEYMIKVEFNEELARIRDQLDSLRDQINAIHMESAEDLGFDPEKKLKLEN 532
Query: 508 GTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNC 567
G R+T+ + ++RK+ +++ L T K G+ F+ KLK++ ++ + +EY+
Sbjct: 533 HHIHGWCMRLTRNDAKELRKR--KEYMELSTVKAGIYFSTKKLKEIANETATLQKEYEKQ 590
Query: 568 QKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG-DI 626
Q LV ++ +T+S + + L+ +L+ LDVL SFA +S P PY RP ++ +
Sbjct: 591 QSTLVKEIVSITLTYSPVLERLSLILANLDVLCSFAHASSYAPIPYIRPIMHGLNTQRKT 650
Query: 627 ILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
L SRHP +E QD V FI ND L + F IITGPNMGGKST+IRQVGV LMAQ+G
Sbjct: 651 RLTNSRHPVLEMQDDVAFISNDVLLEDDVANFLIITGPNMGGKSTYIRQVGVISLMAQIG 710
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
FVPC+ A I+V D I RVGAGD QL+GVSTFM EMLETASILK AT SLII+DELGR
Sbjct: 711 CFVPCEEAEIAVVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNATKNSLIIVDELGR 770
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDGFGLAWAI E + +I LFATHFHELTAL+ + +N V N HV
Sbjct: 771 GTSTYDGFGLAWAIAEFIAGKIGCFALFATHFHELTALSDKLSN---------VQNMHVV 821
Query: 807 AHID------STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
AHI+ + S +T+LYKVEPG DQSFGIHVAE FP+ ++ +A+ KA ELE
Sbjct: 822 AHIEKGDSNHNDSDDITLLYKVEPGISDQSFGIHVAEVVQFPQKIIKMAKRKAEELESL 880
>gi|365763167|gb|EHN04697.1| Msh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 964
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 359/942 (38%), Positives = 533/942 (56%), Gaps = 84/942 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + L L + +E+Y+ W+L+KS +P
Sbjct: 66 NCQLDPVTAKNFHEPTKYVTVSLQV-LATLLKLCLLDLGYKVEIYD---KGWKLIKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR L+
Sbjct: 356 EWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR-GNLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S R+P I + L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVRSVWLAPLSHHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEIHSIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD- 625
Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P D
Sbjct: 591 QQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPMDSERR 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV LMAQ+
Sbjct: 651 THLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+ VSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKXVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L ++++ V N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTEL---------SEKLPNVKNMHV 821
Query: 806 SAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ AK+ + +++ G R LKE+
Sbjct: 882 LKTNNEDLKKAKLSL----------QEVNEGNIRLKALLKEW 913
>gi|401623755|gb|EJS41843.1| msh2p [Saccharomyces arboricola H-6]
Length = 964
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 356/904 (39%), Positives = 520/904 (57%), Gaps = 74/904 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ +YYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYIALPKKLLKTIRLVDKGEYYTVIGSDAVFVADSVYHTQSVLK 65
Query: 67 --QLGTGS-----DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
QL + + V+VS + L L + +E+Y+ S W+L KS +P
Sbjct: 66 NCQLDPITAKNFDEPAKYVTVSLQV-LATLLKLCLLDLGYKVEIYDKS---WKLTKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +++ N D+ +++A N ++ C IG+ ++D T +G+ + +D+
Sbjct: 122 GNIEQVNELMNLN---IDSSIVIASLKVQWNSQDGNCVIGISFIDTTAYKVGMLDIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG KECL L ++E + + + + RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVKECLVQDLTLNPNSNTEVQKVINVIDRCGCVVTLLKNSEFSEKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L+ + L + +++ GA AL+SY +LLS++ G Y + ++ L +M+
Sbjct: 239 LDLTKLLGNDL--ALSLPQKYSKLSMGACNALISYLQLLSEQDQVGKYELVEHKLKEFMK 296
Query: 293 LDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
LD++A++ALN+ S ++ K SLF L+N C G RLL+
Sbjct: 297 LDASAIKALNLFPQGPQNPFGGNNLAVSGFTSGGNSGKITSLFQLLNH-CRTNAGVRLLN 355
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL ++++I R D+V +D LRQ L L I DI RL L KR GL+
Sbjct: 356 EWLKQPLTNIDQITKRHDLVDYLIDQIELRQMLTTDFLPMIPDIRRLTKKLNKR-GGLED 414
Query: 394 IVKLYQSSIRLPYIRSALQQY---EGQFSS---LIKERYLDPLESLTDDDHLNKFIALVE 447
++K+YQ S ++P I + EG S L++ +L PL + L+KF +VE
Sbjct: 415 VLKIYQFSKKIPEIVQIFNSFLEDEGPVESVKELVRSTWLAPLSQHVEP--LSKFEEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDLD E N E+MI ++ L+ ++ ++L +IH++H +A DL DK LKL+
Sbjct: 473 TTVDLDAYEENNEFMIKIEFNEELAKIRGNLDALREEIHTIHLDSAEDLGFDPDKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQKEYDK 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD- 625
Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P +
Sbjct: 591 QQAALVREIISITLTYTPVFEKLSLVLAHLDVISSFAHTSSYAPIPYIRPKLHPMNSERR 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV LMAQ+
Sbjct: 651 THLVSSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII+DELG
Sbjct: 711 GCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT L+ + N V N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIAGKIGCFALFATHFHELTELSEKLPN---------VKNMHV 821
Query: 806 SAHI--DSTSRK-----LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
AHI D+ +K +T+LYKVEPG DQSFGIHVAE FPE +V +A+ KA EL+D
Sbjct: 822 VAHIEKDTNEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELDD 881
Query: 859 FTPS 862
S
Sbjct: 882 LKTS 885
>gi|158299376|ref|XP_319476.4| AGAP010282-PA [Anopheles gambiae str. PEST]
gi|157014335|gb|EAA14192.4| AGAP010282-PA [Anopheles gambiae str. PEST]
Length = 881
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 340/867 (39%), Positives = 513/867 (59%), Gaps = 40/867 (4%)
Query: 11 LKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L LD Q R F+ FYK+L VR FDR DYY+ HG +A F+AKT + ++ A++ +
Sbjct: 10 LNLDKAQQRTFIEFYKSLGEKPATTVRIFDRTDYYSCHGVDAAFVAKTLFKSSNAIKIME 69
Query: 70 TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG-----SNWRLVKSGTPGNLGS 124
+ L VS+SKN FE + RDLLL R ++ +E+Y ++W + G+PGNL
Sbjct: 70 VDNQQLPYVSLSKNNFEGLIRDLLLVR-NYRIEVYSKESKRKHENDWSIQYKGSPGNLAH 128
Query: 125 YEDVLFANN-EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+EDVLF NN EM ++AL IGLG++++ +R + + EF+DD +T +E+
Sbjct: 129 FEDVLFNNNNEMVIGSALIALHIRHESKQRMIGLGFIEVNERRMAVIEFVDDDFYTELEA 188
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTR--DLVQDLDRLVR 241
+V G KECLLP+ A +E + + + R V++T RK EF D++ L++L+R
Sbjct: 189 LIVVTGPKECLLPSVA---AEYERVEQIMKRNNVIVTTRKVKEFMKDKVDVIDSLNKLLR 245
Query: 242 --GSVEPVRDLVSGFE--IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
P + + +A ALG +L+Y EL + N+G + + + ++ LD+AA
Sbjct: 246 FREGQHPNANTIPEVSKSLALSALGVILNYLELTQEPGNHGQFRLESLDANRFVHLDAAA 305
Query: 298 MRALNVLES-----KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
+ ALN+ + K++A + S+ G+++R C G RL+ W+KQPL D I R D
Sbjct: 306 VSALNLFPNPGTSVKSNAYRWQSVLGVLDR-CRTPQGHRLMAQWMKQPLQDYEIIKDRHD 364
Query: 353 IVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
IV+ FV++T +R +L HLK++ DI ++ L +R+A LQ I +LYQ +R+P + + L
Sbjct: 365 IVEYFVNNTIVRSELYDNHLKKLPDIMFVLKRLLRRKASLQDIFRLYQVILRVPRMLTLL 424
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+ + + +++ Y +SL D L F ++VE +DL +E+GEY++ + +D+ L
Sbjct: 425 ETNDLESIAVLNNIYNPIKDSLND---LKLFKSMVEQIIDLQAVEHGEYLVKADFDSQLK 481
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
K E + + ++ A D+ L ++KL+ +Q G+ FRIT K+E IRK
Sbjct: 482 KRKEEMDEVYSKMKHHLSTVAKDIGLDAGSSIKLEFVSQHGYHFRITLKDETLIRK--NN 539
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
+ +L+ K GV+F TKL+ + + + Y+ Q+ +V VI+ AV + E + L +
Sbjct: 540 SYRILDAVKGGVRFITTKLQDYSESFATLKIAYEEQQQTIVAEVIRVAVGYVEPWTMLNS 599
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
++ LD L+SFA AS+ P PY RP + + L RHPC+E Q+ VN+I ND
Sbjct: 600 QIAYLDCLVSFAVSASTAPIPYVRPKMYREGPSVLKLIQVRHPCLELQEDVNYIANDAMF 659
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
++ IITGPNMGGKST+IR VGV +LMA +GSFVPC+ A +S+ DCI RVGA D
Sbjct: 660 DAKETSTYIITGPNMGGKSTYIRSVGVTVLMAHIGSFVPCESAEMSIFDCILGRVGADDN 719
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
+G+STFM EM+ETA I++ ATDRSL+IIDELGRGTSTY+G G+AW+I E L +E +
Sbjct: 720 FTKGLSTFMVEMIETAGIIRRATDRSLVIIDELGRGTSTYEGCGIAWSIAEWLAKESKCF 779
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
TLFATHF E+T LA N V N H+ A +D LT+LY+V+PG ++SF
Sbjct: 780 TLFATHFQEITDLASYVEN---------VKNCHMQAIVDGEC--LTLLYQVKPGVMEKSF 828
Query: 832 GIHVAEFANFPESVVTLAREKAAELED 858
GI VA+ ANFP V+ LA++ E ED
Sbjct: 829 GIQVAKLANFPPGVIKLAQKFYNECED 855
>gi|254578468|ref|XP_002495220.1| ZYRO0B06160p [Zygosaccharomyces rouxii]
gi|238938110|emb|CAR26287.1| ZYRO0B06160p [Zygosaccharomyces rouxii]
Length = 957
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 365/940 (38%), Positives = 536/940 (57%), Gaps = 86/940 (9%)
Query: 9 PELKL-DAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ +YYT G +A F+A + YHT + L+
Sbjct: 7 PELKFSDISEERRFYKRYLGLPEKPSTTLRAIDKGEYYTIIGHDAIFVADSIYHTQSVLK 66
Query: 67 QLGT-------GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
++ L V+V +F T+ + LL+ + +E+Y+ + S L KS +P
Sbjct: 67 DCKVEPSVARQTNEPLKYVTVLPQVFSTLLKTCLLD-LGYKVEIYDKACS---LSKSASP 122
Query: 120 GNLGSYEDVLFANNEMQDTPVIVA---LFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ +D++ N D+ +++A L N +E C IG+ ++D + +G+ + +D+
Sbjct: 123 GNIEQIQDLM---NLAVDSSIVIAGLKLQFNTQEGHCVIGVAFIDTSNYKVGMLDIIDNE 179
Query: 177 HFTNVESALVALGCKECLLP----TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDL 232
++N+ES L+ LG +ECLLP +E++ SSE K + + RCG + T K ++F +D+
Sbjct: 180 VYSNLESFLIQLGVRECLLPDMSKSESI-SSELKKIIGVIERCGCVSTLIKSSDFTDKDV 238
Query: 233 VQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL LV E L + A + GALL+Y +LL+++ G Y + ++SL +M+
Sbjct: 239 ELDLANLVGD--ELSLSLPRYSKSALSSCGALLNYLQLLNEQDQVGKYELIQHSLQEFMK 296
Query: 293 LDSAAMRALNVLESKTDANKNF----------------SLFGLMNRTCTAGMGKRLLHMW 336
LD++A++ALN+ AN+ F SLF L+N C G RLL+ W
Sbjct: 297 LDASAIKALNLFPQT--ANQPFGPAAGISLGGAGTKVSSLFQLLNH-CRTNAGVRLLNEW 353
Query: 337 LKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIV 395
LKQPL DV +I R +V +D LRQ L+ HL + D+ R+ L R L+ ++
Sbjct: 354 LKQPLTDVEQIEKRHILVDYLIDQLELRQILQTDHLPSVLDVRRITKKL-NRNGNLEDVL 412
Query: 396 KLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
K+YQ ++P I L + + SL+K +L+PL S T+ L K + +VET+
Sbjct: 413 KIYQFGKKIPEIADLLSSFLDDDQGSAEAKSLVKSTWLEPLMSHTEP--LTKLLEMVETT 470
Query: 450 VDLDQLE--NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDK 507
VDLD E NG +MI + GL+ ++++ ++L+ +I+S+H +TA DL +K LKL+
Sbjct: 471 VDLDAYEQHNG-FMIKVELNEGLANIRDQLDALKDEINSIHLETAEDLGFDPEKKLKLEN 529
Query: 508 GTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNC 567
G R+T+ + ++R +++ L T K G+ F+ KLK++ + + +EY
Sbjct: 530 HHIHGWCMRLTRNDARELRNH--KEYLELSTVKAGIYFSTKKLKEIASETAVLQKEYDKQ 587
Query: 568 QKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII 627
Q LV ++ +T+S + + L+ +L+ LDVL SFA +S P PY RP ++ +
Sbjct: 588 QSALVKEIVSITLTYSPVLEKLSLVLANLDVLCSFAHASSYAPIPYIRPKMHGLETTRTT 647
Query: 628 -LEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
L SRHP +E QD V FI ND L G + F IITGPNMGGKST+IRQVGV LMAQ+G
Sbjct: 648 RLVASRHPVLEVQDDVTFIANDVNLESGVNDFLIITGPNMGGKSTYIRQVGVISLMAQIG 707
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
FVPC+ A I+V D + RVGAGD QL+GVSTFM EMLETASILK AT SLII+DELGR
Sbjct: 708 CFVPCEEADIAVVDAVLCRVGAGDSQLKGVSTFMVEMLETASILKNATKNSLIIVDELGR 767
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDGFGLAWAI EH+ +I LFATHFHELTALA + N V N V
Sbjct: 768 GTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTALADKLPN---------VKNMQVV 818
Query: 807 AHID------STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
AH++ + S +T+LYKVEPG DQSFGI+VAE FP+ +V +A+ KA ELE+
Sbjct: 819 AHLEKDQDGQNESDDITLLYKVEPGISDQSFGIYVAEVVQFPQKIVKMAKRKANELEELK 878
Query: 861 PSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
S AK+ V +++ G R LK++
Sbjct: 879 SHDQDSKRAKLSV----------EELNEGNQRLKTLLKDW 908
>gi|410730699|ref|XP_003980170.1| hypothetical protein NDAI_0G05110 [Naumovozyma dairenensis CBS 421]
gi|401780347|emb|CCK73494.1| hypothetical protein NDAI_0G05110 [Naumovozyma dairenensis CBS 421]
Length = 962
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 357/946 (37%), Positives = 536/946 (56%), Gaps = 91/946 (9%)
Query: 9 PELKL-DAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK D + R F + TLP + +R D+ +YYT G++A F+A+ YHT + L+
Sbjct: 6 PDLKFSDVSEERSFYKRFTTLPEKPSTTLRIVDKGEYYTIIGDDAVFVAENIYHTQSVLK 65
Query: 67 Q-------LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
+ L V+VS + T+ + LL+ + +E+Y+ W+L KS +P
Sbjct: 66 DCHLDPVTVKQFKQPLKYVTVSLQVVSTLLKTCLLD-LGYKVEIYDKL---WKLQKSASP 121
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
GN+ D++ N D+ +++A N ++ C IG+ +VD T +G+ +D+
Sbjct: 122 GNVEQVSDLM---NIAIDSSIVIAALKVQLNSKDGNCVIGVAFVDTTAYKIGMLNIVDNE 178
Query: 177 HFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
++N+ES L+ LG +EC+ + +S+ K + L RCG ++T K +EF +D+
Sbjct: 179 VYSNLESFLIQLGVRECIIQDMSNNDNTASDFKKITGVLDRCGCVVTTVKSSEFSDKDVE 238
Query: 234 QDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMR 292
DL +L++ E L + +A GA AL+ Y ELL+++ Y + ++SL +M+
Sbjct: 239 MDLTKLLKN--ELSLSLPEKYSNLAMGACNALIGYLELLNEQDQLDRYELIEHSLQEFMK 296
Query: 293 LDSAAMRALNVL----------------ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMW 336
LD++A++A+N+ + K SLF L+N C G RLL+ W
Sbjct: 297 LDASAIKAMNLFPQGPVQPFGPSISSSFSNSNGGGKIASLFQLLN-NCKTNAGTRLLNEW 355
Query: 337 LKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIV 395
LKQPL +++EI R D+V +D LRQ L+ + L + D+ RL L K+ L+ ++
Sbjct: 356 LKQPLTNLDEITKRHDLVGYLMDQLELRQMLQTETLPAVPDLRRLTKKL-KKSGNLEDVL 414
Query: 396 KLYQSSIRLPYIRSALQ--------QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
KLY+ S ++P I L+ Q E SSL++ ++DPL S D L+KF +VE
Sbjct: 415 KLYEFSKKIPEITQLLESFLEEGSSQSEEDVSSLVRSTWIDPLSSYLDP--LSKFDEMVE 472
Query: 448 TSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
T+VDL E N EYMI ++ L+ ++ + +S++ QI+ +H +A DL +K LKL+
Sbjct: 473 TTVDLQAYEENNEYMIKVEFNEELAKIREQLDSMKEQINIIHLDSAEDLGFDPEKKLKLE 532
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
G R+T+ + ++RK +++ L T K G+ F+ +LK+L + + +EY
Sbjct: 533 NHHLHGWCMRLTRNDAKELRKH--KKYLELSTVKAGIFFSTRELKELAQETAVLQKEYDR 590
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG-D 625
Q LV ++ ++S + + L+ +L+ LDVL SF+ +S P PY RP ++ D
Sbjct: 591 QQSSLVKEIVGITSSYSPVLEKLSQILAHLDVLCSFSHASSFAPIPYIRPTMHGIDSDRK 650
Query: 626 IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
L SRHP +E Q+ +NFI N+ L RG F IITGPNMGGKST+IRQV V LMAQ+
Sbjct: 651 THLIKSRHPVLEMQEDLNFIANNVTLERGVGDFIIITGPNMGGKSTYIRQVAVISLMAQI 710
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVPC++A I+V D I RVGAGD QL+GVSTFM EMLETASILK AT SLII+DELG
Sbjct: 711 GCFVPCEQADIAVVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNATKNSLIIVDELG 770
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTSTYDGFGLAWAI EH+ +I LFATHFHELT+L+ + N V N HV
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTSLSDKLPN---------VKNMHV 821
Query: 806 SAHIDSTSRK-----LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
+AH++ K +T+LY+VEPG DQSFGIHVAE FP+ +V +A+ KA EL+D
Sbjct: 822 AAHVEMNRSKFENEDITLLYRVEPGISDQSFGIHVAEVVQFPDKIVRMAKRKANELDDLK 881
Query: 861 PSAVISDDAKIEV-----GSKRKR--------------ISDPNDMS 887
+ AK+ + G+K+ + +SDPN +S
Sbjct: 882 RGNEDAKKAKLTIQEINEGNKKLKYILKDWVNKVREEGLSDPNKLS 927
>gi|170065385|ref|XP_001867917.1| DNA mismatch repair protein spellchecker 1 [Culex quinquefasciatus]
gi|167882495|gb|EDS45878.1| DNA mismatch repair protein spellchecker 1 [Culex quinquefasciatus]
Length = 901
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 342/867 (39%), Positives = 510/867 (58%), Gaps = 45/867 (5%)
Query: 21 FLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGS--DALSSV 78
FL F K+ + VRFFDR DYY+ HG +A F+AK + + ++ + D L V
Sbjct: 8 FLQFQKS----STTVRFFDRSDYYSCHGPDAEFVAKCVFKSINVVKIMAPAGLEDELPYV 63
Query: 79 SVSKNMFETIARDLLLERTDHTLELYEGSG-----SNWRLVKSGTPGNLGSYEDVLFANN 133
+SKN FE+ RDLLL R ++ E+Y G ++W+L G+PGNL +ED+LFANN
Sbjct: 64 VLSKNNFESFIRDLLLVR-NYRAEVYTNKGPTKTSNDWQLEFKGSPGNLTQFEDLLFANN 122
Query: 134 EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKEC 193
M ++AL IG+ V+ +R+ ++EF+DD ++ +E+ +V LG KEC
Sbjct: 123 GMVAGSALIALHVKLLGKQKIIGIACVENNERLFSVSEFVDDDFYSELEAVIVILGPKEC 182
Query: 194 LLPTEAVKSSECKTLRDALTRCGVMLTERKKTEF--KTRDLVQDLDRLVR---GSVEPVR 248
+LP+ + ++ ++ L R V++T +KK EF + +++ DL++L+ G E
Sbjct: 183 ILPSP--RDADYDRIKTLLERNNVVVTSKKKQEFSLEKNEVISDLNKLLHFAEGQQESAN 240
Query: 249 DLV-SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV---- 303
+ + A ALG + Y EL +D +N+G+Y ++ +L ++ LD+AA+ ALN+
Sbjct: 241 TMPETSKTTALAALGVAIRYLELTNDSANHGHYELKLLNLHRFVHLDAAAVSALNLFPKP 300
Query: 304 -LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
L + A K S+ G+++R C G RL++ WLKQPL ++ I R DIV++ VD T
Sbjct: 301 GLAMNSAAFKWHSVLGVLDR-CRTPQGHRLVNQWLKQPLRSIDIIKDRQDIVESLVDSTN 359
Query: 363 LRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSL 421
+R +L HLKRI DI L+ L +++A LQ I +LYQ +R+P + L+ E ++
Sbjct: 360 VRSELHDVHLKRIPDILILIKKLLRKKASLQDIYRLYQVVLRIPIVLRLLESIE---NTA 416
Query: 422 IKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLE 481
++ LDP++ D L F ++VE +DL +E GEY++ ++D L K E + +E
Sbjct: 417 MRSIVLDPMKDTLGD--LKMFKSMVEQILDLTAIERGEYLVKPTFDDQLKEFKQEMDEVE 474
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
++ L + A DL L ++KLD G FRI+ K+E IRK +T+F VL+ K
Sbjct: 475 SKMKRLLTKVADDLGLDAGSSIKLDFVGHHGFHFRISLKDETLIRK--STKFRVLDAVKG 532
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
G +FTN KL L + E Y+ QK +V+ VI+ A+ + E + L +++LD +S
Sbjct: 533 GARFTNDKLTDLNGDFASAKESYEAQQKSIVDEVIRIAIGYVEPWTMLNNQIAQLDCFVS 592
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQII 661
FA A S P PY RP I G + L RHPC+E Q+ V+FI ND + K+ II
Sbjct: 593 FAIAAVSAPEPYVRPKIFAMGEGRLKLTQLRHPCLELQEDVSFIANDAVFEKNKTTMYII 652
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKSTFIR VGV +LMA VG+FVPC A IS+ D I RVGA D +G+STFM
Sbjct: 653 TGPNMGGKSTFIRSVGVAVLMAHVGAFVPCAEAEISIVDSILGRVGADDNLSKGLSTFMV 712
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EM+ETA I++ AT+ SL+IIDELGRGTSTY+G G+AW+I E+L ++ + +LFATHFHE+
Sbjct: 713 EMVETAGIVRTATENSLVIIDELGRGTSTYEGCGIAWSIAEYLAKQTKCFSLFATHFHEI 772
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T + T+Q+ V + H+ A D T+LY+V+ G +SFGI VA+ ANF
Sbjct: 773 TEM---------TEQVKTVKSCHMDAIADKDG--FTLLYQVKEGVMPKSFGIKVAKLANF 821
Query: 842 PESVVTLAREKAAELEDFTPSAVISDD 868
P +VV LA++ + ED I +D
Sbjct: 822 PTAVVELAQKLYDDCEDHYSQMQIEND 848
>gi|57870611|gb|AAH89046.1| MSH2 protein, partial [Xenopus laevis]
Length = 676
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/672 (45%), Positives = 432/672 (64%), Gaps = 23/672 (3%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE-SKTDANKN 313
++A AL A++ Y ELLSDESN+G + + + L YM+LD+AA+ ALN+ S D +
Sbjct: 7 QVAMSALAAVMKYLELLSDESNFGQFVMTNFDLSQYMKLDNAAVGALNLFPGSAEDTSGT 66
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL-K 372
SL GL+N+ C G+RL++ W+KQPL+D N + RL++V+AFV D LRQ L++ L +
Sbjct: 67 QSLAGLLNK-CKTPQGQRLVNQWIKQPLMDKNRVEERLNLVEAFVMDVELRQCLQEDLLR 125
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLES 432
R D+ RL +++ A LQ +LYQ+ LP + A+++YEG L+ + PL
Sbjct: 126 RFPDLNRLAKKFQRQTANLQDCYRLYQAVNHLPTVVQAIEKYEGTHQMLLLAVFATPLSD 185
Query: 433 LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
L+ D +KF ++ET++D+DQ+EN E+++ +S+D L+ L+ + + LE+ + A
Sbjct: 186 LSSD--FSKFQEMIETTLDMDQVENHEFLVKASFDPNLTELREKMDELEKNMQGALGGAA 243
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+L L K++KL+ +Q GH FR+T KEE +R +F ++ +K+GV+FTN+KL
Sbjct: 244 RELGLDAGKSIKLESNSQIGHYFRVTCKEEKALRN--NKKFTTIDIQKNGVRFTNSKLSS 301
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
L ++Y + EEY+ Q +V +I + + + ++L ++++LD ++SFA +++S P P
Sbjct: 302 LSEEYMRNREEYEEAQNAIVKEIITISAGYVDPIQTLNDVIAQLDAVVSFAHVSNSAPVP 361
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
Y RP I G I+L +RHPC+E QD V FIPND + K FQIITGPNMGGKST+
Sbjct: 362 YVRPVILEKGQGRIVLHSARHPCIEMQDDVAFIPNDITFEKEKQMFQIITGPNMGGKSTY 421
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
IRQ GV +LMAQ+G FVPCD A +S+ DCI ARVGAGD QL+GVSTFM EMLETASIL+
Sbjct: 422 IRQTGVIVLMAQIGCFVPCDSAQVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRS 481
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT+ SLIIIDELGRGTSTYDGFGLAWAI E++ +I+A +FATHFHELTALA
Sbjct: 482 ATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIKAFCMFATHFHELTALA------- 534
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
Q+ V N HV+A +T LTMLY+++ G CDQSFGIHVAE ANFP+ V+ A+EK
Sbjct: 535 --DQVPTVNNLHVTAL--TTEDTLTMLYRIKKGVCDQSFGIHVAELANFPKHVIETAKEK 590
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKE 912
A ELE+F DD E KR+ + G FL +PL M +E
Sbjct: 591 ALELEEFQYVGN-PDDCDDEPARKRR----CEEKEEGEKIIQDFLSRVKALPLTEMSEEE 645
Query: 913 ALERVKRMKDDL 924
++K+ + D+
Sbjct: 646 IKIKLKQFRADV 657
>gi|207341422|gb|EDZ69483.1| YOL090Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 872
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 348/896 (38%), Positives = 512/896 (57%), Gaps = 84/896 (9%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PELK D + R F Y LP + +R D+ DYYT G +A F+A + YHT + L+
Sbjct: 6 PELKFSDVSEERNFYKKYTGLPKKPLKTIRLVDKGDYYTVIGSDAIFVADSVYHTQSVLK 65
Query: 67 QLGTGSDALSSVSVSKNMFE-----TIARDLLLERTD-------HTLELYEGSGSNWRLV 114
L V+ +KN E T++ +L + +E+Y+ W+L+
Sbjct: 66 NC-----QLDPVT-AKNFHEPTKYVTVSLQVLATLLKLCLLDLGYKVEIYD---KGWKLI 116
Query: 115 KSGTPGNLGSYEDVLFANNEMQDTPVIVALFP---NFRENGCTIGLGYVDLTKRVLGLAE 171
KS +PGN+ +++ N D+ +I+A N ++ C IG+ ++D T +G+ +
Sbjct: 117 KSASPGNIEQVNELMNMN---IDSSIIIASLKVQWNSQDGNCIIGVAFIDTTAYKVGMLD 173
Query: 172 FLDDSHFTNVESALVALGCKECL---LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFK 228
+D+ ++N+ES L+ LG KECL L + + ++E + + + + RCG ++T K +EF
Sbjct: 174 IVDNEVYSNLESFLIQLGVKECLVQDLTSNSNSNAEMQKVINVIDRCGCVVTLLKNSEFS 233
Query: 229 TRDLVQDLDRLVRGSVEPVRDLVSGF-EIAPGALGALLSYAELLSDESNYGNYYIRKYSL 287
+D+ DL +L+ + L + +++ GA AL+ Y +LLS++ G Y + ++ L
Sbjct: 234 EKDVELDLTKLLGDDL--ALSLPQKYSKLSMGACNALIGYLQLLSEQDQVGKYELVEHKL 291
Query: 288 DSYMRLDSAAMRALNVLE------------------SKTDANKNFSLFGLMNRTCTAGMG 329
+M+LD++A++ALN+ S ++ K SLF L+N C G
Sbjct: 292 KEFMKLDASAIKALNLFPQGPQNPFGSNNLAVSGFTSAGNSGKVTSLFQLLNH-CKTNAG 350
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRR 388
RLL+ WLKQPL +++EIN R D+V +D LRQ L ++L I DI RL L KR
Sbjct: 351 VRLLNEWLKQPLTNIDEINKRHDLVDYLIDQIELRQMLTSEYLPMIPDIRRLTKKLNKR- 409
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKF 442
L+ ++K+YQ S R+P I + L++ +L PL + L+KF
Sbjct: 410 GNLEDVLKIYQFSKRIPEIVQVFTSFLEDDSPTEPVKELVRSVWLAPLSHHVEP--LSKF 467
Query: 443 IALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDK 501
+VET+VDLD E N E+MI ++ L ++++ ++L +IHS+H +A DL DK
Sbjct: 468 EEMVETTVDLDAYEENNEFMIKVEFNEELGKIRSKLDALRDEIHSIHLDSAEDLGFDPDK 527
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LKL+ G R+T+ + ++RK ++I L T K G+ F+ +LK + ++ +
Sbjct: 528 KLKLENHHLHGWCMRLTRNDAKELRKH--KKYIELSTVKAGIFFSTKQLKSIANETNILQ 585
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
+EY Q LV +I +T++ +F+ L+ +L+ LDV+ SFA +S P PY RP ++P
Sbjct: 586 KEYDKQQSALVREIINITLTYTPVFEKLSLVLAHLDVIASFAHTSSYAPIPYIRPKLHPM 645
Query: 622 DVGD-IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
D L SRHP +E QD ++FI ND L GK F IITGPNMGGKST+IRQVGV
Sbjct: 646 DSERRTHLISSRHPVLEMQDDISFISNDVTLESGKGDFLIITGPNMGGKSTYIRQVGVIS 705
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
LMAQ+G FVPC+ A I++ D I RVGAGD QL+GVSTFM E+LETASILK A+ SLII
Sbjct: 706 LMAQIGCFVPCEEAEIAIVDAILCRVGAGDSQLKGVSTFMVEILETASILKNASKNSLII 765
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
+DELGRGTSTYDGFGLAWAI EH+ +I LFATHFHELT L+ + N V
Sbjct: 766 VDELGRGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPN---------V 816
Query: 801 ANYHVSAHIDSTSRK-------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
N HV AHI+ ++ +T+LYKVEPG DQSFGIHVAE FPE +V +
Sbjct: 817 KNMHVVAHIEKNLKEQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMG 872
>gi|332019050|gb|EGI59582.1| DNA mismatch repair protein Msh2 [Acromyrmex echinatior]
Length = 857
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 330/808 (40%), Positives = 484/808 (59%), Gaps = 38/808 (4%)
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLG 123
+G + V ++K+ FET RDLLL + + +E+Y GS NW L G+PGNL
Sbjct: 2 IGAEPHKMEGVILNKSHFETFVRDLLLVK-QYRVEVYINLGSSKNQNWILEYKGSPGNLS 60
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+ED+LF NN++ ++A+ +GL VD+ ++ + EF D+ F+N+ES
Sbjct: 61 HFEDILFGNNDIAVGVSVIAVKLGIEGKSRVVGLSCVDVVSTLISVIEFQDNESFSNLES 120
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
+V L KECLL + S E +TL+ + R VM+T RKK EF + ++ DL++L++
Sbjct: 121 LIVTLAPKECLL-IQGEGSFEFQTLKQLMERSNVMVTLRKKNEFVSDSIIDDLNKLIKFK 179
Query: 242 -GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
G + + L +A A AL+ Y +L SDE + + + + Y+RLDSAAM+
Sbjct: 180 KGQKQNAQSLPEVNLNLAMSATSALIKYLDLTSDEGHMNQFKLNQIEQSRYIRLDSAAMK 239
Query: 300 ALNVLESKTD------ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
ALN+ E TD N S+ L+++ C G RL+ W++QPL D++ I R DI
Sbjct: 240 ALNI-EPHTDTIPTLHGNSVASILTLLDK-CRTAQGHRLIAQWVRQPLKDLSLIKERHDI 297
Query: 354 VQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V+ V + LR L +LKRI D+++L L +++ LQ K+Y + + Y+ L+
Sbjct: 298 VELLVKNNELRSTLSDDYLKRIPDLQQLAKKLARKKLTLQDCYKIY---LCISYLPKLLE 354
Query: 413 QYEGQFS-SLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
Q + + + + ++PL+ L +D ++KF L+E ++DLD E G++M++ + L
Sbjct: 355 QLLLEKNVTTLNTMIIEPLKELIED--MDKFQQLIEQTIDLDAAEKGDFMVNPGFADDLK 412
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
LK+ + LE I + A+DL + K +KL+ Q G+ FRIT KEE +R K
Sbjct: 413 TLKDAMDELEETIQKQLSKAANDLCMEAGKMIKLECNQQLGYYFRITLKEEKILRNK--K 470
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
+ +L++ K GV+F N KL +L D + +Y QK+++ +++ A +SE +S+
Sbjct: 471 HYTILDSNKAGVRFRNNKLNELNDDFLDARNKYLERQKDVIVEIVEIAAGYSETVRSIGG 530
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
+L+ LDVL +F+ A S Y RP + P + G++ L RHPC+E Q V++I ND
Sbjct: 531 VLACLDVLTAFSSAAVSANKVYVRPKMVPSEEGELNLIQVRHPCLEMQQGVDYIANDIIF 590
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
R + F IITGPNMGGKST+IR VGV LMA +GSFVPCD A+IS+ DCI ARVGA D
Sbjct: 591 KRDQCHFYIITGPNMGGKSTYIRSVGVTALMAHIGSFVPCDEATISLLDCILARVGADDS 650
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
QL+G+STFM EM+ETA+ILK AT SL+IIDELGRGTSTY+G G+AW+I EHL I++
Sbjct: 651 QLKGLSTFMMEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLARNIKSY 710
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
LFATHFHE+T LA E + V N HV+A ++ KLT+LYKV PG CDQSF
Sbjct: 711 CLFATHFHEITKLAEE---------IPAVKNQHVTALVEDD--KLTLLYKVMPGICDQSF 759
Query: 832 GIHVAEFANFPESVVTLAREKAAELEDF 859
G+HVA+ ANFP V+ A+ K AELED+
Sbjct: 760 GLHVAKMANFPSDVIEFAKRKQAELEDY 787
>gi|242011403|ref|XP_002426440.1| DNA mismatch repair protein MsH2, putative [Pediculus humanus
corporis]
gi|212510545|gb|EEB13702.1| DNA mismatch repair protein MsH2, putative [Pediculus humanus
corporis]
Length = 894
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 329/849 (38%), Positives = 512/849 (60%), Gaps = 40/849 (4%)
Query: 20 GFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV 78
GF SF+K LP + +RFF+R ++YT HG +A F+AK + + ++++ LG G S+
Sbjct: 15 GFFSFFKKLPEKSSTTIRFFNRIEFYTVHGLDALFVAKEVFKSMSSVKYLGKGETKFESL 74
Query: 79 SVSKNMFETIARDLLLERTDHTLELYEGSG----SNWRLVKSGTPGNLGSYEDVLFANNE 134
++KN FET+ +DLL+ + +E+Y G ++W L G+PGNL ++ED+ N+E
Sbjct: 75 VLNKNQFETLVKDLLIIH-HYRVEVYSPKGGVKSNDWFLELKGSPGNLTAFEDIF--NSE 131
Query: 135 MQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
+ ++A+ T+G+ +DL+ +G+ +F DD FT++E +V KE +
Sbjct: 132 LDVGAAVLAVKVVDEAKVKTVGVSIIDLSTESMGICQFPDDDQFTDLEGFIVQQSPKEII 191
Query: 195 LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR---GSVEPVRDLV 251
+P SS K RC M+ + K++ F T +L QDL+ L+ G + L
Sbjct: 192 IPDLPEYSSILKIA----NRCCGMVVKLKQSNFNTENLAQDLNHLLEWKEGQSQNASALP 247
Query: 252 S-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
IA L AL+ Y EL N+ + ++ +D A+ +AL ++ ++ +
Sbjct: 248 EMKLNIATSCLSALIKYLEL---SGKNLNFKLETVEPKRFVHMDIASAKALGLIPQQSSS 304
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQ 369
+++ +L +N+ C G+RLL W+KQPL D+ I+ R DIV AF+DDT LR L +
Sbjct: 305 SQD-TLIHFLNK-CRTPQGRRLLTQWVKQPLKDIRTISERHDIVAAFIDDTELRMSLSEE 362
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
HL+ D + L L+ + A LQ K+Y++ +P + +L+ +S+ +KE +L P
Sbjct: 363 HLRWFPDGQLLCRKLKNKNASLQDCYKIYRAVEHIPSLLESLKT--ATYSASVKETFLSP 420
Query: 430 LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
LE +++D L+KF ++ +++D+DQ+ G ++I + + LS LK + L+ +I
Sbjct: 421 LEEVSED--LSKFQEMISSTLDMDQINKGLFLIKADFSEELSELKASLDYLDEEIQKELG 478
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRIT-KKEEPKIRKKLTTQFIVLETRKDGVKFTNT 548
A +L L K LKL+ Q+G+ FRI+ KKEE KIR +++F +L++ G++F ++
Sbjct: 479 NAARELHLESGKILKLETMPQYGYHFRISNKKEESKIRN--SSKFKILDSTNAGLRFQSS 536
Query: 549 KLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASS 608
LK+L + Y + + Y +CQK +V+ V+ A ++ +L +++ LDVL SFA +A++
Sbjct: 537 SLKELNEDYLEKRKSYDDCQKTVVDEVLDIAAGYTGPLMNLNNIIANLDVLTSFAVIAAN 596
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
TPY RP I P + G + L+ +RHP +EAQD ++ IPND L + F IITGPNMGG
Sbjct: 597 AVTPYVRPQIRPLEDGILRLKEARHPLLEAQDSISVIPNDILLEKNGKTFYIITGPNMGG 656
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST+IR VG+N+L+AQ+GSFVPC A IS++D I AR+G+ D Q GVSTFM EM+E ++
Sbjct: 657 KSTYIRTVGINVLLAQIGSFVPCLEAEISLKDSILARIGSSDRQSIGVSTFMNEMVEISA 716
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL+ AT+ SL++IDELGRGTSTY+G GLAWAI EHL I+A TLFATHF EL +L E
Sbjct: 717 ILQRATENSLVMIDELGRGTSTYEGCGLAWAIAEHLASTIKAFTLFATHFQELVSLEDE- 775
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
+ VAN HV+A D +LTMLYKV PG+ D+SFG+ +A+ A F + V+
Sbjct: 776 --------ISSVANVHVTAMTD--QYELTMLYKVCPGSSDRSFGLEIAKMAGFQKHVIEN 825
Query: 849 AREKAAELE 857
AREK +L+
Sbjct: 826 AREKLLKLD 834
>gi|403217955|emb|CCK72447.1| hypothetical protein KNAG_0K00810 [Kazachstania naganishii CBS
8797]
Length = 974
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 348/913 (38%), Positives = 524/913 (57%), Gaps = 84/913 (9%)
Query: 9 PELKLDA-KQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
P+LK + R F S + TL T +R DR +YYT +A F+A + YHT + L+
Sbjct: 8 PDLKFSGIAEERSFYSRFLTLEEKPTTTIRIVDRGEYYTVVSTDAVFVADSIYHTQSVLK 67
Query: 67 QLGT--------GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGT 118
G V++S + + + LLE + +E+Y+ + W+L++ +
Sbjct: 68 TCNLDPVTAKKFGQQPKQYVTLSPQILSNLLKKCLLE-LGYKVEIYDKA---WKLLRMAS 123
Query: 119 PGNLGSYEDVLFANNEMQDTPVIVALFPNF--RENGCTIGLGYVDLTKRVLGLAEFLDDS 176
PGN+ S D+L N + ++ VI +L F ++ C IG+ +VD + LG+ + LD+
Sbjct: 124 PGNIDSVADLL--NVSIDNSIVIASLKLQFNPKDGNCLIGVAFVDTSDYKLGMLDILDNE 181
Query: 177 HFTNVESALVALGCKECLLP--TEAVKSSECKTLRDALTRCGVMLTERKKTEFK--TRDL 232
F+N+ES L+ LG KECL+P + A + E + + + RCG T + ++F D+
Sbjct: 182 VFSNLESFLIQLGVKECLVPDLSHAENNQEWTKIVNVIDRCGTAATLIRSSQFNKGNEDV 241
Query: 233 VQDLDRLVRGSVEPVRDLVSGFE-IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
DL +L + + L F +A GA ALL Y LLS+ G + + ++SL ++
Sbjct: 242 ENDLIKLTNDKL--IMSLPQKFSPLALGACHALLDYLNLLSNSDVLGKFELVQHSLKEFI 299
Query: 292 RLDSAAMRALNV---------LESKTDANKNF---------SLFGLMNRTCTAGMGKRLL 333
+LD+++++ALN+ + S +N ++ SLF L+N C G RLL
Sbjct: 300 KLDASSIKALNLYPQGPSNPTMTSTQTSNFSYGFNSKGKVTSLFQLLNH-CKTNAGIRLL 358
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQ 392
+ W+KQPL D+ +IN R ++V+ +D LRQ L+ +L D+ RL L K L+
Sbjct: 359 NEWIKQPLTDMTKINTRHNLVEYLIDQLELRQLLQCDYLPLFPDLRRLTKRLIKN-GTLE 417
Query: 393 QIVKLYQSSIRLPYIRSALQQY-------------EGQFSSLIKERYLDPLESLTDDDHL 439
++K+YQ + R+P + L+ + E L+++ ++ PL+ D L
Sbjct: 418 DVLKVYQFTKRVPELVQLLESFTNPDEENLADSENESSLEKLVQDTWIVPLQDRLDP--L 475
Query: 440 NKFIALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
+K +VET++DLD E N ++MI ++ L +++++ ++L +I +H + A DL
Sbjct: 476 SKLEEMVETTIDLDAYEENNDFMIKVEFNQELGSIRDQLDNLREKIKQIHLEAAEDLGFD 535
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
+K LKL+ G R+T+ + ++RK ++I L T K G+ F+ KLK++ +
Sbjct: 536 PEKKLKLENHHMHGWCMRLTRNDAKELRKH--REYIELSTIKAGIFFSTKKLKEVASKTA 593
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
++ +EY+ Q LV ++ +T+S + + ++ +L+ LDVL SFA ++S P PY RP +
Sbjct: 594 ELEKEYEKQQSILVKEIVSITLTYSPVLEKISLVLAHLDVLTSFAHVSSYAPIPYVRPTM 653
Query: 619 NPPDVGD---IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
+ D G L SRHP +E QD + FI ND L + F IITGPNMGGKST+IRQ
Sbjct: 654 H--DFGSKRKTHLVASRHPVLEMQDDIVFIANDVDLEKDSKEFLIITGPNMGGKSTYIRQ 711
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
VGV LMAQ+G FVPC+ A I+V D I RVGAGD QL+GVSTFM EMLETASILK AT+
Sbjct: 712 VGVITLMAQIGCFVPCEEAEIAVVDAILCRVGAGDSQLKGVSTFMVEMLETASILKNATE 771
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
SLII+DELGRGTSTYDGFGLAWAI EH+ ++I+ TLFATHFHELT+LA + +N
Sbjct: 772 NSLIIVDELGRGTSTYDGFGLAWAIAEHIAKKIKCFTLFATHFHELTSLADKLSN----- 826
Query: 796 QMVGVANYHVSAHIDSTSRK------LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
V N HV AHI+ + + +T+LYKVE G DQSFGIHVAE FP+ +V +A
Sbjct: 827 ----VVNMHVVAHIEQSEKSQHDSDDITLLYKVELGISDQSFGIHVAEVVQFPQKIVKMA 882
Query: 850 REKAAELEDFTPS 862
+ KAAELED S
Sbjct: 883 KRKAAELEDLKQS 895
>gi|254567329|ref|XP_002490775.1| Protein that forms heterodimers with Msh3p and Msh6p [Komagataella
pastoris GS115]
gi|238030571|emb|CAY68495.1| Protein that forms heterodimers with Msh3p and Msh6p [Komagataella
pastoris GS115]
gi|328351159|emb|CCA37559.1| DNA mismatch repair protein mutS [Komagataella pastoris CBS 7435]
Length = 931
Score = 577 bits (1487), Expect = e-161, Method: Compositional matrix adjust.
Identities = 358/903 (39%), Positives = 517/903 (57%), Gaps = 64/903 (7%)
Query: 9 PELKL-DAKQARGFLSFYKTLPNDT-RAVRFFDRRDYYTAHGENATFIAKTYYHTTTALR 66
PEL+ D GF Y L R V DR DYYT ++A +A+ Y T + ++
Sbjct: 6 PELRFQDKSDETGFYRKYLKLGEKPDRTVWAVDRGDYYTVLDQDAILVAELIYKTNSVVK 65
Query: 67 Q----LGTGSDA-LSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGN 121
L +G + V++S +F + +L+ H +E+Y+ + W L K+ +PGN
Sbjct: 66 TSNATLASGQHKEIKYVTLSPQVFVNFLKMCVLD-IGHKIEIYDKT---WTLSKTASPGN 121
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L + ++ N+ +T AL + R +G IGL Y+D +++G+ EF+D+ F+NV
Sbjct: 122 LAEVDHLI--NSSDLNTQ---ALIASLRLSGKNIGLSYIDSVNKIIGVVEFVDNDLFSNV 176
Query: 182 ESALVALGCKECLLPTEAVKSSECK--TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
ESA++ LG KECLL K+++ L + RC V++T K +++ T+++ QDL RL
Sbjct: 177 ESAMIQLGIKECLLAGNTSKAADPDYVKLEQVMNRCDVVVTHVKNSDYSTKNIEQDLVRL 236
Query: 240 VRGSVEPVRDLVSGFEIAPGALGALLSYAELL-SDESNYGNYYIRKYSLDSYMRLDSAAM 298
+ + V + A G + +L+ Y LL SD+S + + Y+L Y+RLD +A+
Sbjct: 237 TGDDLVFSTNDVHSLDQALGCVNSLVLYLNLLNSDDSGWT---LELYNLSQYLRLDYSAV 293
Query: 299 RALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
++LN+ ++ NKN SLFGL+N T G G RLL WLKQPLLD+ I R +I
Sbjct: 294 KSLNLFPSVSNNNQNSMNKNNSLFGLLNHCKTVG-GSRLLSQWLKQPLLDIKAITERQEI 352
Query: 354 VQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL- 411
VQ VDD +R L+ Q L + DI +L L R+A L +V++YQ +LP + L
Sbjct: 353 VQLLVDDMTMRAGLQEQFLNSVPDISKLTKKLASRKAKLDDVVRIYQLCTKLPDLLGLLI 412
Query: 412 --QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS----- 464
+ + S LI E +++PL+ + L KF LVET++DLD LEN + SS
Sbjct: 413 AEDKENTRASELIDEWFINPLQKICSS--LLKFQELVETTIDLDALENATSISSSMVSVN 470
Query: 465 -SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
+D L + E E + Q+ H+ + DL++ + K LKL+ G FR+T+ +
Sbjct: 471 PQFDENLVRVSKELEEMNSQMQQEHEFASDDLNMEMVKKLKLENHHVHGWCFRLTRTDSS 530
Query: 524 KIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
IR ++ L+T K GV FT KL +L ++ EEY Q +V +I+ + T+S
Sbjct: 531 VIRG--NKRYRELQTVKAGVFFTTAKLSELASNVAELTEEYSKIQSGVVKEIIEISSTYS 588
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD--IILEGSRHPCVEAQDW 641
I L+ ++S+LDVL SFA ++S P PY RP + D + L G+RHPC+E QD
Sbjct: 589 PILVQLSAVISKLDVLTSFAHVSSFAPIPYQRPKLYGLDDSSRKLKLIGARHPCLETQDD 648
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
+ FI ND L + +S F IITGPNMGGKST+IRQVGV LMAQ+G F+PCD A I V D
Sbjct: 649 LTFIANDVVLTKDESEFAIITGPNMGGKSTYIRQVGVIALMAQIGCFLPCDEAEICVFDS 708
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
I ARVGA D QL+GVSTFM EMLE +SILK AT SL+IIDELGRGTSTYDGFGLA+ I
Sbjct: 709 ILARVGASDSQLKGVSTFMSEMLEMSSILKTATSNSLVIIDELGRGTSTYDGFGLAYGIS 768
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH--IDSTSRKLTML 819
E++ ++ + TLFATHFHELT L ++ + V N HV A D +T+L
Sbjct: 769 EYIANKLHSFTLFATHFHELTKL---------SELIPTVINLHVVAQTSTDGKDDDITLL 819
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR 879
YKV+PG D+SFGI+VAE FP+ ++ +A+ KA EL+ DDA E +K+ +
Sbjct: 820 YKVKPGISDKSFGINVAEIVKFPQKIINMAKRKAQELD---------DDAVYESAAKKIK 870
Query: 880 ISD 882
+D
Sbjct: 871 ATD 873
>gi|162312237|ref|XP_001713136.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|26396556|sp|O74773.2|MSH2_SCHPO RecName: Full=DNA mismatch repair protein msh2
gi|4151103|emb|CAA07342.1| Msh2 [Schizosaccharomyces pombe]
gi|157310425|emb|CAA21156.2| MutS protein homolog 2 [Schizosaccharomyces pombe]
Length = 982
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 345/941 (36%), Positives = 524/941 (55%), Gaps = 89/941 (9%)
Query: 17 QARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALS 76
+AR F +FY+ +P DT VR FDR ++Y A GE+A+F+A+ YHTT+ L+ + S
Sbjct: 15 EARMF-NFYEKMPKDTNTVRVFDRGEFYVAIGEDASFVAQNAYHTTSVLKHHNVSNT--S 71
Query: 77 SVSVSKNMFETIARDLLLERTDHTLELY--EGSGSNWRLVKSGTPGNLGSYEDVLFANNE 134
++S ++F A D+L +E++ + + + L+K +PGN+ ED+L + N
Sbjct: 72 YCNLSPSLFIKFAEDVL-SNLAKRVEIWGANSAKTGFELLKQASPGNMQMLEDLLVSENY 130
Query: 135 MQDTPVIV--------ALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALV 186
+ T + A+ +++ IG+ ++D + LG++EF+D +TN E+ +V
Sbjct: 131 QESTAISDSSVSSVLLAVTTRVKQDQRIIGVAFIDPILKKLGVSEFVDSDAYTNFEALIV 190
Query: 187 ALGCKECLLPTE-----------AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
+G KEC++ ++ ++E LR+ + CG ++T + +EF RD+ +
Sbjct: 191 QVGAKECIISQSGHESTNGNSAVSINTAEINRLRNIIEGCGALVTTIRSSEFSARDVELE 250
Query: 236 LDRLVRGSVEPVRDLVSGFEIAPGALGALLSY---AELLSD-----ESNYGNYYIRKYSL 287
L +++ V G ++A + ALL Y A L D E+ ++ ++L
Sbjct: 251 LSKVLDSPVTHALVPELGLQLAMASCNALLRYLGPALLNPDMEDDRENTSRKLHLYHHNL 310
Query: 288 DSYMRLDSAAMRALNVLESKT-DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNE 346
+ YMRLD AA+R+LN+L +A+K SL+GL+N C MG R L W+ QPLLD
Sbjct: 311 EQYMRLDIAAVRSLNLLPPPNGNAHKTMSLYGLLNH-CRTAMGARNLRRWIVQPLLDAKS 369
Query: 347 INARLDIVQAFVDDTALRQDLRQHL---KRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
I R D+V A V+D RQ L + I DI +L L + A L+ +V++YQ +
Sbjct: 370 IERRHDLVSALVEDAEARQLLLDDDHLLRSIPDIPKLCRRLTRGSASLEDVVRIYQMAKA 429
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMIS 463
LP I + L + L+ + Y + L + + L K I LVET++DL+ L++ +Y+I
Sbjct: 430 LPKIVTVLDSLTSEHKDLVDKVYTNVLNNHCKN--LEKLIELVETTIDLEALDSHQYIIR 487
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
+ +D L L+ + L+ I HK+ SDL +K L L++ +G R+T+ E
Sbjct: 488 AEFDEELLDLRQRLDELQHSIFEEHKRVGSDLHQDTEKKLHLEQHHLYGWCLRLTRTEAG 547
Query: 524 KIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
+R + ++ + L T+K+GV FT +L L + Y + Y+ Q L VI+ A T+
Sbjct: 548 CLRGR-SSHYTELSTQKNGVYFTTKRLHSLNNSYMDHQKSYRYHQNGLAREVIKIAATYG 606
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI-----------NPPDVGDII----- 627
+++ +++ LDV+LSFA ++ PY RP+I ++ DI+
Sbjct: 607 PPLEAIGQVIAHLDVILSFAHASTVAVIPYVRPNIVDSSIAQEKHGQSSNILDIVSLEDT 666
Query: 628 -------------------LEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
L+ +RHPC+EAQD V FIPND L G S IITGPNMGG
Sbjct: 667 PNFEEIRRTLENNHCARLYLKQARHPCLEAQDDVKFIPNDVNLEHGSSELLIITGPNMGG 726
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST+IRQVGV +MAQ+G VPC+ A + + D I ARVGA D QL+G+STFM EMLETA+
Sbjct: 727 KSTYIRQVGVITVMAQIGCPVPCEVADLDIIDAILARVGASDSQLKGISTFMAEMLETAT 786
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL+ AT RSLIIIDELGRGTST DGFGLAWAI EH+V +I LFATH+HE+T L+ E
Sbjct: 787 ILRAATPRSLIIIDELGRGTSTTDGFGLAWAITEHIVTQIGCFCLFATHYHEMTKLSEE- 845
Query: 789 ANEFNTKQMVGVANYHVSAHI-DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
+ V N HV+A++ DS S+ + +LY V GA D+SFGIHVA+ A+FP ++
Sbjct: 846 --------ITTVKNLHVTAYVGDSESKDVALLYNVCEGASDRSFGIHVAKLAHFPPKIIE 897
Query: 848 LAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSR 888
+A KAAELE A D + EV SK++ ++ D+ R
Sbjct: 898 MASNKAAELEAEDSGA--QGDTQ-EVKSKKEGMAIVRDIMR 935
>gi|403260988|ref|XP_003922924.1| PREDICTED: DNA mismatch repair protein Msh2 [Saimiri boliviensis
boliviensis]
Length = 825
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 341/915 (37%), Positives = 490/915 (53%), Gaps = 118/915 (12%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YT HGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTVHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVL 129
+ + RD + G + +PGNL +EDVL
Sbjct: 69 PAGEDRDGECWGGT--RGLWRDSIPASESGRRTASPAWGRDVGAPALASPGNLSQFEDVL 126
Query: 130 FANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALG 189
F NN+ + +V + + + +G+GYVD +R LGL EF D+ F+N+E+ L+ +G
Sbjct: 127 FGNNDTSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIG 186
Query: 190 CKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRD 249
KEC+LP + + LR + R G+++TE+KK +F T+D+ QDL+RL++G
Sbjct: 187 PKECVLPG-GETAGDMGKLRQIIQRGGILITEKKKADFSTKDIYQDLNRLLKGK------ 239
Query: 250 LVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+++SA + + S D
Sbjct: 240 ---------------------------------------KGEQMNSAVLPEMENQGSVED 260
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
+ SL L+N+ C G+RL++ W+KQPL+D N I R+ A D L +
Sbjct: 261 TTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERI----AHKDMGVLWK---- 311
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
EK+R G Q L+ ++ P
Sbjct: 312 ---------------EKKRKGKHQ--------------------------KLLLAVFVTP 330
Query: 430 LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
L L D +KF ++ET++D+DQ+EN E+++ S+D LS L+ LE+++ S
Sbjct: 331 LTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLI 388
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
A DL L K +KLD QFG+ FR+T KEE +R F ++ +K+GVKFTN+K
Sbjct: 389 SAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFTTVDIQKNGVKFTNSK 446
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
L L ++Y K EY+ Q +V ++ + + E ++L +L++LD ++SFA +++
Sbjct: 447 LTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGA 506
Query: 610 PTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
P PY RP I G IIL+ SRH CVE QD V FIPND + K F IITGPNMGGK
Sbjct: 507 PVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVYFEKNKQMFHIITGPNMGGK 566
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETASI
Sbjct: 567 STYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASI 626
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENA 789
L+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATHFHELTALA+
Sbjct: 627 LRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN--- 683
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHVAE ANFP+ V+ A
Sbjct: 684 ------QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECA 735
Query: 850 REKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMD 909
++KA ELE+F +E +KR + + +G +FL + MP M
Sbjct: 736 KQKALELEEFQYIGESQGYDNMEPATKRCYL----EREQGEKIIQEFLSKVKQMPFTEMS 791
Query: 910 LKEALERVKRMKDDL 924
+ ++K++K ++
Sbjct: 792 EENITIKLKQLKAEV 806
>gi|361131040|gb|EHL02770.1| putative DNA mismatch repair protein msh-2 [Glarea lozoyensis
74030]
Length = 783
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/679 (44%), Positives = 422/679 (62%), Gaps = 41/679 (6%)
Query: 215 CGVMLTERKKTEFKTRDLVQDLDRLVR----GSVEPVRDLVSGFEIAPGALGALLSYAEL 270
CG+ ++ER +F T+D+ QDL RL++ + P DL ++A G+ AL+ Y +
Sbjct: 78 CGIAISERPGGDFGTKDIDQDLARLLKDEKSAGILPQTDL----KLAMGSAAALIKYLGV 133
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ D SN+G Y + ++ L +M+LD++A++ALN++ D +K SL+GL+N C +G
Sbjct: 134 MHDNSNFGQYQLYQHDLSQFMKLDASALKALNLMPGPRDGSKTMSLYGLLNH-CKTPIGS 192
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRA 389
RL+ WLKQPL+ +EI R +V+AFV+DT LRQ +++ HL+ I D+ RL +++ A
Sbjct: 193 RLMAQWLKQPLMSKDEIEKRQQLVEAFVEDTELRQTMQEEHLRSIPDLYRLAKRFQRKMA 252
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE-----SLTD-DDHLNKFI 443
L+ +++ YQ +RLP I + L+ +I E+Y +PL+ L D D L K +
Sbjct: 253 NLEDVIRAYQVVLRLPNIIATLE-------GVIDEQYRNPLDEAYTIKLRDYSDSLAKLL 305
Query: 444 ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKAL 503
+VET+VDL+ +EN EY I +D GL ++ + E ++ H+ + DL +DK L
Sbjct: 306 EMVETTVDLEAMENHEYKIKPEFDDGLRIIQRKLEKSRHEMDVEHRAASKDLGQEIDKKL 365
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
L+ G R+T+ E IR ++ T+K+GV FT KL+ ++ ++ E
Sbjct: 366 FLENHKVHGWCMRLTRAEAGCIRN--NKKYQECSTQKNGVFFTTHKLQSCRREFDQLAEN 423
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
Y Q LVN V+ A ++ + + LA +++ LDV++SFA + PT Y RP ++P
Sbjct: 424 YNRTQSSLVNEVVSVAASYCPVIEFLAGVIAHLDVIVSFAHCSVHAPTSYVRPKMHPRGE 483
Query: 624 GDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
G IL+ +RHPC+E QD + FI ND L RG S F IITGPN GGKST+IRQ+GV LMA
Sbjct: 484 GSTILKEARHPCMEMQDDIQFITNDVTLERGSSQFLIITGPNCGGKSTYIRQIGVIALMA 543
Query: 684 QVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDE 743
Q+G FVPC A +++ DCI ARVGA D QL+GVSTFM EMLETA+ILK AT SLIIIDE
Sbjct: 544 QIGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANILKSATSESLIIIDE 603
Query: 744 LGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANY 803
LGRGTSTYDGFGLAWAI EH+++EI ++FATHFHELTAL V N
Sbjct: 604 LGRGTSTYDGFGLAWAISEHIIKEIGCFSMFATHFHELTALVDTYPQ---------VQNL 654
Query: 804 HVSAHID---STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
HV AHID R++T+LYKVE G CDQSFGIHVAE FPE VV +A+ KA ELEDFT
Sbjct: 655 HVVAHIDDNGKAKREVTLLYKVEDGICDQSFGIHVAELVRFPEKVVNMAKRKADELEDFT 714
Query: 861 P----SAVISDDAKIEVGS 875
+ V + +E GS
Sbjct: 715 SKHEGATVKYEKEDVETGS 733
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Query: 9 PELKLDAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQ 67
PELK+D + + F+ F+K LP D +R FDR D+YTAHG++A+FIA+T Y TT+ LRQ
Sbjct: 5 PELKVDDESS--FIKFFKNLPAKDDDTIRIFDRGDWYTAHGDDASFIARTVYKTTSVLRQ 62
Query: 68 LG 69
LG
Sbjct: 63 LG 64
>gi|194384482|dbj|BAG59401.1| unnamed protein product [Homo sapiens]
Length = 682
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 301/672 (44%), Positives = 428/672 (63%), Gaps = 22/672 (3%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE-SKTDANKN 313
++A +L A++ + ELLSD+SN+G + + + YM+LD AA+RALN+ + S D +
Sbjct: 12 QVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAAVRALNLFQGSVEDTTGS 71
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL-K 372
SL L+N+ C G+RL++ W+KQPL+D N I RL++V+AFV+D LRQ L++ L +
Sbjct: 72 QSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLR 130
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLES 432
R D+ RL +++ A LQ +LYQ +LP + AL+++EG+ L+ ++ PL
Sbjct: 131 RFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTD 190
Query: 433 LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
L D +KF ++ET++D+DQ+EN E+++ S+D LS L+ LE+++ S A
Sbjct: 191 LRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAA 248
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
DL L K +KLD QFG+ FR+T KEE +R F ++ +K+GVKFTN+KL
Sbjct: 249 RDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFSTVDIQKNGVKFTNSKLTS 306
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
L ++Y K EY+ Q +V ++ + + E ++L +L++LD ++SFA +++ P P
Sbjct: 307 LNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVP 366
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
Y RP I G IIL+ SRH CVE QD + FIPND + K F IITGPNMGGKST+
Sbjct: 367 YVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTY 426
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETASIL+
Sbjct: 427 IRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRS 486
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATHFHELTALA+
Sbjct: 487 ATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN------ 540
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHVAE ANFP+ V+ A++K
Sbjct: 541 ---QIPTVNNLHVTAL--TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQK 595
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKE 912
A ELE+F +E +K+ + + +G +FL + MP M +
Sbjct: 596 ALELEEFQYIGESQGYDIMEPAAKKCYL----EREQGEKIIQEFLSKVKQMPFTEMSEEN 651
Query: 913 ALERVKRMKDDL 924
++K++K ++
Sbjct: 652 ITIKLKQLKAEV 663
>gi|195474019|ref|XP_002089289.1| GE19033 [Drosophila yakuba]
gi|194175390|gb|EDW89001.1| GE19033 [Drosophila yakuba]
Length = 917
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 340/867 (39%), Positives = 495/867 (57%), Gaps = 44/867 (5%)
Query: 9 PELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHTTTA 64
P L +D R F+ F+ L P T VRFFD D YT HG ++ +AK Y +T
Sbjct: 12 PSLHMDTNARRNFIKFHAKLGEKPGTT--VRFFDHSDCYTVHGNDDCELVAKIVYKSTAY 69
Query: 65 LRQL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
+ L + L VS+SK FE R+LLL R ++ +E+Y S+W + G+PGNL
Sbjct: 70 IGALLPEDKKETLQFVSMSKGNFELAVRELLLVR-NYRVEVYVKKSSDWEIEYRGSPGNL 128
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+ED+LFAN E+ I++L G +G+ V+ L EFLDD FT +
Sbjct: 129 LQFEDILFANKEVLVGNSIISLLVKLEGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTEL 188
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ +V LG KECLLP+ + KTL L R GVM+T KK+ DL+QDL+RL+R
Sbjct: 189 EATVVLLGPKECLLPSVDGDYAAVKTL---LERNGVMITVPKKS--SANDLLQDLNRLLR 243
Query: 242 ---GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E L ++A AL + + Y +L++D N G+Y I++ L ++ LDSAA
Sbjct: 244 FAKGQQEDATGLKELQLQLASNALKSAIKYLDLVNDAGNLGHYEIKQLDLKRFVHLDSAA 303
Query: 298 MRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
+ ALN++ + + S+ G+++ C G RL+ W+KQPL + +N R +
Sbjct: 304 VAALNIMPKPGTHPSMPSYRWQSVMGVLDH-CRTPQGHRLMGQWVKQPLRSRDILNDRHN 362
Query: 353 IVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
IVQ ++ + L +LKRI DI L L +R+A LQ + ++YQ +R P I L
Sbjct: 363 IVQCLLESPDTMETLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKILKVL 422
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+ +S I+ P +S +D L +VE VD + +E GEY++ +S+D+ L
Sbjct: 423 LELG---NSTIESVICAPFKSFLED--LTGLKQMVEQVVDFEAIERGEYLVKASFDSRLM 477
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ L ++ +L + +LDL +KL+ + GH FRIT K++ +RK
Sbjct: 478 ELQQTMTELYSKMENLQVKCTQELDLDGKSQVKLENVAKLGHHFRITLKDDSVLRK--NK 535
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
+ +++ K GV+FT+ KL+ D++ Y+ Q +V +IQ AV ++ SL
Sbjct: 536 NYRIVDVIKGGVRFTSDKLEGYADEFASCRTRYEEQQLSIVEEIIQVAVGYAAPLTSLNN 595
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
L++LD L+SFA A S PTPY RP + +++L+ RHPC+E Q+ V+FI N
Sbjct: 596 ELAQLDCLVSFAIAARSAPTPYVRPQMLEEGARELVLQDVRHPCLELQEHVSFIANSVDF 655
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K IITGPNMGGKST+IR VG +LMA VG+FVPC A+IS+ D I RVGA D
Sbjct: 656 KKEKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSLATISMVDSILGRVGASDN 715
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
++G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E +
Sbjct: 716 IIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCF 775
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
TLFATHFHE+T LA + + V N H++A D+ + T+LY+V PG ++SF
Sbjct: 776 TLFATHFHEITKLA---------ETLPTVKNCHMAAVADADN--FTLLYQVRPGVMEKSF 824
Query: 832 GIHVAEFANFPESVVTLAREKAAELED 858
GI VA ANFP+ VV A+E E ED
Sbjct: 825 GIQVARLANFPDHVVQNAQEVYNEFED 851
>gi|213405331|ref|XP_002173437.1| DNA mismatch repair protein msh2 [Schizosaccharomyces japonicus
yFS275]
gi|212001484|gb|EEB07144.1| DNA mismatch repair protein msh2 [Schizosaccharomyces japonicus
yFS275]
Length = 995
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 352/1008 (34%), Positives = 536/1008 (53%), Gaps = 119/1008 (11%)
Query: 15 AKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDA 74
+++AR F +FY TL D + FDR + Y A G++A F+A T YHTT+ L+ G
Sbjct: 11 SEEARIF-AFYDTLEKDVNTLTLFDRGESYFALGQDAEFVANTAYHTTSVLKYYGV--KK 67
Query: 75 LSSVSVSKNMFETIARDLLLERTDHTLELY----EGSGSNWRLVKSGTPGNLGSYEDVLF 130
+ ++S ++F + AR +L + H ++ G LVK +PGNL S ED L
Sbjct: 68 IPYCTMSYSLFPSFARQVL---STHAKRVHIWAPTGKKRELTLVKQASPGNLQSLEDELS 124
Query: 131 ANN------EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+ E + +++A+ R++ +G+ ++D++ R +G+ EF+D + N ES
Sbjct: 125 NDTLNSVATEDSTSGILLAVTTRVRQDQRMVGVAFIDVSLRQIGVCEFVDSDSYANFESL 184
Query: 185 LVALGCKECLLPTEAVKSS--------ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
LV G +E LL + ++ E L + G ++T + ++F +RD+ L
Sbjct: 185 LVQTGAREILLASAGAQTESQSSAAKMELNRLHNIGESAGALVTGVRMSDFSSRDVEVLL 244
Query: 237 DRLVRGSVEPVRDLVSGFEIAPGALGALLSY---------------------AELLSDES 275
R++ V ++A + ALL Y E + S
Sbjct: 245 SRVLGKPVSHATTPELSLQLAMASCAALLKYVGPSLVGSMSSTTEEDEAEDSGEQEKETS 304
Query: 276 NYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT-DANKNFSLFGLMNRTCTAGMGKRLLH 334
++Y +++L+ YMRLD A+ ALN+ + + NK+ SLFGL+N C MG R L
Sbjct: 305 RTFSFY--EHNLEHYMRLDVPAVAALNLFPAAGGNNNKSMSLFGLLNH-CRTAMGMRQLR 361
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQ---DLRQHLKRISDIERLMHNLEKRRAGL 391
WL QPLLD + IN RLD+V+AFV+D +RQ D + L+ I D+ RL L + A L
Sbjct: 362 RWLSQPLLDADAINTRLDLVEAFVEDAEVRQLLMDDDRLLRCIPDVPRLSRRLIRGTASL 421
Query: 392 QQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD 451
+ +V++YQ ++ LPY L++ L+ + Y +E D L K I LV T++D
Sbjct: 422 EDVVRVYQMALALPYFVDVLKESSSPKKDLLNQLYTQRIEGYAGD--LAKLIELVNTTID 479
Query: 452 LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF 511
L L+ Y+I + +D L L+ + + L R I+ H++ DL L +K L L+ +
Sbjct: 480 LKALDAHRYVIKAEFDEELMELRQQLDELRRSIYKEHERAGDDLGLDTEKKLHLEHHHIY 539
Query: 512 GHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKEL 571
G R+T+ E +R K +++ L T+K+GV FT ++L Y + Y Q L
Sbjct: 540 GWCLRLTRTEAGCLRGK-GSRYTELATQKNGVYFTTSRLHGFNTTYTDLHRSYTYHQNGL 598
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP----DINPPDVGD-- 625
V++ A T+ + + +L+ LDV++SFA ++ P PY RP D+ V D
Sbjct: 599 AREVVKIAATYYAPLEDVGNLLAHLDVIVSFAHASTIAPIPYVRPNVHCDVTAASVADAA 658
Query: 626 -----------------------------------IILEGSRHPCVEAQDWVNFIPNDCK 650
++L+ SRHPC+E QD VNFIPND +
Sbjct: 659 SIEENEEGVPDSTISETKFQSVPFRKILSRTPCTKLVLKASRHPCLEVQDDVNFIPNDVR 718
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L GK IITGPNMGGKST+IRQVGV ++MAQ+G FVPC+ A + + D + ARVGAGD
Sbjct: 719 LEHGKRQLLIITGPNMGGKSTYIRQVGVIVVMAQIGCFVPCESADLDIVDSVLARVGAGD 778
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+GVSTFM EMLETA+IL+ A+ RSLII+DELGRGTST DGFGLAWAI E++V+ I
Sbjct: 779 SQLKGVSTFMAEMLETATILRSASPRSLIIVDELGRGTSTTDGFGLAWAIAEYIVKRIDC 838
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-DSTSRKLTMLYKVEPGACDQ 829
LFATHFHELT +A V N HV+A + + ++ ++ LY+V GA D+
Sbjct: 839 FCLFATHFHELTKMAETTPV---------VQNLHVTALVSEDNTKDISFLYQVCNGASDR 889
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG 889
SFGIHVAE A FP+ ++ +AR KA ELE+ T ++ ++ + ++++ + N + R
Sbjct: 890 SFGIHVAELAQFPQKIIQMARMKARELEE-TNTSNTENEGPEQKKARKEGMELINRVMRT 948
Query: 890 -AARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAGDCCWLQQ 936
AR + DMP + M +E K++ + + + W+QQ
Sbjct: 949 WKARVSR------DMPQDKM-----MEEFKKVLAEFQSEIDGNTWIQQ 985
>gi|194857041|ref|XP_001968883.1| GG25117 [Drosophila erecta]
gi|190660750|gb|EDV57942.1| GG25117 [Drosophila erecta]
Length = 917
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/867 (39%), Positives = 491/867 (56%), Gaps = 44/867 (5%)
Query: 9 PELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHTTTA 64
P L +D R F+ F+ L P T VRFFD D YT HG ++ +AK Y +T
Sbjct: 12 PTLHMDTNARRNFIKFHAKLGEKPGTT--VRFFDHSDCYTVHGNDDCELVAKIVYKSTAY 69
Query: 65 LRQL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
+ L + L VS+SK FE R+LLL R ++ +E+Y S+W + G+PGNL
Sbjct: 70 IGALLPEDKKETLQFVSMSKANFELAVRELLLVR-NYRVEVYVKKSSDWEIEYRGSPGNL 128
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+ED+LFAN E+ I++L G +G+ V+ L EFLDD FT +
Sbjct: 129 LQFEDILFANKEVLIGNSIISLLVKLEGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTEL 188
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ +V LG KECLLP+ + KTL L R GVM+T KK+ DL+QDL+RL+R
Sbjct: 189 EATVVLLGPKECLLPSLEGDYAAVKTL---LERNGVMVTVPKKS--SANDLLQDLNRLLR 243
Query: 242 ---GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E L ++A AL + Y +L++D N G+Y I++ L ++ LDSAA
Sbjct: 244 FAKGQQEDATGLKELQLQLASNALKTAIKYLDLVNDAGNLGHYEIKQLDLKRFVHLDSAA 303
Query: 298 MRALNVLES-----KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
+ ALN++ + + S+ G+++ C G RL+ W+KQPL + +N R +
Sbjct: 304 VAALNIMPKPGTYPSMPSYRWQSIMGVLDH-CRTPQGHRLMGQWVKQPLRSRDILNDRHN 362
Query: 353 IVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
IVQ ++ + L +LKRI DI L L +R+A LQ + ++YQ +R P I L
Sbjct: 363 IVQCLLESPDTMETLSLDYLKRIPDILMLTKKLMRRKASLQDLFRIYQVILRTPKILKVL 422
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+ +S I+ P +S +D L +VE VD + +E GEY++ +S+D+ L
Sbjct: 423 LELG---NSTIESVICAPFKSFLED--LTGLKEMVEQVVDFEAIERGEYLVKASFDSRLM 477
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ L ++ L + DLDL +KL+ + GH FRIT K++ +RK
Sbjct: 478 ELQQMMTELYSKMEKLLAKCTGDLDLDGKSQVKLETIAKLGHHFRITLKDDSVLRK--NK 535
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
+ +++ K GV+FT+ KL+ D++ Y+ Q +V +IQ AV ++ SL
Sbjct: 536 NYRIVDVIKGGVRFTSDKLEGYSDEFASCRTRYEEQQLSIVEEIIQVAVGYAAPLTSLNN 595
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
L++LD L+SFA A S PTPY RP + +++L+ RHPC+E Q+ V+FI N
Sbjct: 596 ELAQLDCLVSFAIAARSAPTPYVRPKMLEEGARELVLQDVRHPCLELQEHVSFIANSVDF 655
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ K IITGPNMGGKST+IR VG +LMA VG+FVPC A+IS+ D I RVGA D
Sbjct: 656 KKEKCNMFIITGPNMGGKSTYIRSVGAAVLMAHVGAFVPCSLATISMVDSILGRVGASDN 715
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
++G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E +
Sbjct: 716 IIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCF 775
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
TLFATHFHE+T LA + V N H++A D+ T+LY+V PG ++SF
Sbjct: 776 TLFATHFHEITKLA---------DTLPTVKNCHMAAVADAD--HFTLLYQVRPGVMEKSF 824
Query: 832 GIHVAEFANFPESVVTLAREKAAELED 858
GI VA ANFPE VV A+E E ED
Sbjct: 825 GIQVARLANFPEHVVQNAQEVYNEFED 851
>gi|24584320|ref|NP_523565.2| spellchecker1, isoform A [Drosophila melanogaster]
gi|386769639|ref|NP_001246031.1| spellchecker1, isoform D [Drosophila melanogaster]
gi|83304687|sp|P43248.4|MSH2_DROME RecName: Full=DNA mismatch repair protein spellchecker 1
gi|22946491|gb|AAF53392.2| spellchecker1, isoform A [Drosophila melanogaster]
gi|383291497|gb|AFH03705.1| spellchecker1, isoform D [Drosophila melanogaster]
Length = 917
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 336/865 (38%), Positives = 491/865 (56%), Gaps = 40/865 (4%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHTTTALR 66
P L +D R F+ F+ L VRFFD D YT HG ++ +AK Y +T +
Sbjct: 12 PTLNMDTNARRNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIG 71
Query: 67 QL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGS 124
L + L VS+SK FE R+LLL R ++ +E+Y + S+W + G+PGNL
Sbjct: 72 ALLPDDKKETLQFVSMSKGNFELAVRELLLVR-NYRVEVYVKNSSDWEIEYRGSPGNLLQ 130
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+ED+LF+N E+ I++L G +G+ V+ L EFLDD FT +E+
Sbjct: 131 FEDILFSNKEVLVGNSIISLLVKLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEA 190
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
+V LG KECLLP+ + S KTL D R GVM+T KK+ DL+QDL+RL+R
Sbjct: 191 TVVLLGPKECLLPSIEGEYSAVKTLLD---RNGVMITMPKKS--GDNDLLQDLNRLLRFA 245
Query: 242 -GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
G E L ++A AL + Y +L++D N G+Y I++ L+ ++ LDSAA+
Sbjct: 246 KGQQEDATGLKELQLQLASNALKTAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLDSAAVA 305
Query: 300 ALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
ALN++ + + S+ G+++ C G RL+ W+KQPL N +N R +IV
Sbjct: 306 ALNIMPKPGTHPSMPSYRWQSVLGVLDH-CRTPQGHRLMGQWVKQPLRSRNILNDRHNIV 364
Query: 355 QAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
Q ++ + L +LKRI DI L L +R+A LQ + ++YQ +R P I L +
Sbjct: 365 QCLLESPDTMETLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKILKVLHE 424
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+ +S I+ P +S D L +VE VD + +E GEY++ +S+D+ L L
Sbjct: 425 LD---NSTIESVICAPFKSFLKD--LTGLKQMVEQVVDFEAIERGEYLVKASFDSRLMEL 479
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ L ++ L + + +L+L +KL+ + GH FRIT K++ +RK +
Sbjct: 480 QQMMTELYSKMEELQFKCSQELNLDGKNQVKLESVAKLGHHFRITVKDDSVLRK--NKNY 537
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
+++ K GV+FT+ KL+ D++ Y+ Q +V +I AV ++ L L
Sbjct: 538 RIVDVIKGGVRFTSDKLEGYADEFASCRTRYEEQQLSIVEEIIHVAVGYAAPLTLLNNEL 597
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
++LD L+SFA A S PTPY RP + +++LE RHPC+E Q+ VNFI N +
Sbjct: 598 AQLDCLVSFAIAARSAPTPYVRPKMLEEGARELVLEDVRHPCLELQEHVNFIANSVDFKK 657
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
+ IITGPNMGGKST+IR VG +LMA +G+FVPC A+IS+ D I RVGA D +
Sbjct: 658 EECNMFIITGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILGRVGASDNII 717
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E + TL
Sbjct: 718 KGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTL 777
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHE+T LA + + V N H++A D+ T+LY+V G ++SFGI
Sbjct: 778 FATHFHEITKLA---------ETLSTVKNCHMAAVADADD--FTLLYQVRSGVMEKSFGI 826
Query: 834 HVAEFANFPESVVTLAREKAAELED 858
VA ANFPE VV A+E E ED
Sbjct: 827 QVARLANFPEHVVQNAQEVYNEFED 851
>gi|113204903|gb|ABI34185.1| RE64551p [Drosophila melanogaster]
Length = 917
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 335/865 (38%), Positives = 491/865 (56%), Gaps = 40/865 (4%)
Query: 9 PELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHTTTALR 66
P L +D R F+ F+ L VRFFD D YT HG ++ +AK Y +T +
Sbjct: 12 PTLNMDTNARRNFIRFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIG 71
Query: 67 QL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGS 124
L + L VS+SK FE R+LLL R ++ +E+Y + S+W + G+PGNL
Sbjct: 72 ALLPDDKKETLQFVSMSKGNFELAVRELLLVR-NYRVEVYVKNSSDWEIEYRGSPGNLLQ 130
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
+ED+LF+N E+ I++L G +G+ V+ L EFLDD FT +E+
Sbjct: 131 FEDILFSNKEVLVGNSIISLLVKLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEA 190
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR-- 241
+V LG KECLLP+ + S KTL D R GVM+T KK+ DL+QDL+RL+R
Sbjct: 191 TVVLLGPKECLLPSIEGEYSAVKTLLD---RNGVMITMPKKS--GDNDLLQDLNRLLRFA 245
Query: 242 -GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMR 299
G E L ++A AL + Y +L++D N G+Y I++ L+ ++ LDSAA+
Sbjct: 246 KGQQEDATGLKELQLQLASNALKTAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLDSAAVA 305
Query: 300 ALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
ALN++ + + S+ G+++ C G RL+ W+KQPL N +N R +IV
Sbjct: 306 ALNIMPKPGTHPSMPSYRWQSVLGVLDH-CRTPQGHRLMGQWVKQPLRSRNILNDRHNIV 364
Query: 355 QAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
Q ++ + L +LKRI DI L + +R+A LQ + ++YQ +R P I L +
Sbjct: 365 QCLLESPDTMETLSLDYLKRIPDILMLTKKIMRRKANLQDLFRIYQVILRTPKILKVLHE 424
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL 473
+ +S I+ P +S D L +VE VD + +E GEY++ +S+D+ L L
Sbjct: 425 LD---NSTIESVICAPFKSFLKD--LTGLKQMVEQVVDFEAIERGEYLVKASFDSRLMEL 479
Query: 474 KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQF 533
+ L ++ L + + +L+L +KL+ + GH FRIT K++ +RK +
Sbjct: 480 QQMMTELYSKMEELQFKCSQELNLDGKNQVKLESVAKLGHHFRITVKDDSVLRK--NKNY 537
Query: 534 IVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATML 593
+++ K GV+FT+ KL+ D++ Y+ Q +V +I AV ++ L L
Sbjct: 538 RIVDVIKGGVRFTSDKLEGYADEFASCRTRYEEQQLSIVEEIIHVAVGYAAPLTLLNNEL 597
Query: 594 SELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
++LD L+SFA A S PTPY RP + +++LE RHPC+E Q+ VNFI N +
Sbjct: 598 AQLDCLVSFAIAARSAPTPYVRPKMLEEGARELVLEDVRHPCLELQEHVNFIANSVDFKK 657
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
+ IITGPNMGGKST+IR VG +LMA +G+FVPC A+IS+ D I RVGA D +
Sbjct: 658 EECNMFIITGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILGRVGASDNII 717
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E + TL
Sbjct: 718 KGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTL 777
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHE+T LA + + V N H++A D+ T+LY+V G ++SFGI
Sbjct: 778 FATHFHEITKLA---------ETLSTVKNCHMAAVADADD--FTLLYQVRSGVMEKSFGI 826
Query: 834 HVAEFANFPESVVTLAREKAAELED 858
VA ANFPE VV A+E E ED
Sbjct: 827 QVARLANFPEHVVQNAQEVYNEFED 851
>gi|675456|gb|AAA62406.1| Spellchecker1, partial [Drosophila melanogaster]
Length = 913
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 335/858 (39%), Positives = 489/858 (56%), Gaps = 40/858 (4%)
Query: 16 KQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHTTTALRQL--GTG 71
K A F+ F+ L VRFFD D YT HG ++ +AK Y +T + L
Sbjct: 15 KCASNFIKFHAKLGEKPATTVRFFDHTDRYTVHGSDDCELVAKIVYKSTAFIGALLPDDK 74
Query: 72 SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFA 131
+ L VS+SK FE R+LLL R ++ +E+Y + S+W + G+PGNL +ED+LF+
Sbjct: 75 KETLQFVSMSKGNFELAVRELLLVR-NYRVEVYVKNSSDWEIEYRGSPGNLLQFEDILFS 133
Query: 132 NNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGC 190
N E+ I++L G +G+ V+ L EFLDD FT +E+ +V LG
Sbjct: 134 NKEVLVGNSIISLLVKLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEATVVLLGP 193
Query: 191 KECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR---GSVEPV 247
KECLLP+ + S KTL D R GVM+T KK+ DL+QDL+RL+R G E
Sbjct: 194 KECLLPSIEGEYSAVKTLLD---RNGVMITMPKKS--GDNDLLQDLNRLLRFAKGQQEDA 248
Query: 248 RDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL-- 304
L ++A AL + Y +L++D N G+Y I++ L+ ++ LDSAA+ ALN++
Sbjct: 249 TGLKELQLQLASNALKTAIKYLDLVNDAGNLGHYEIKQLDLNRFVHLDSAAVAALNIMPK 308
Query: 305 ---ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDT 361
+ + S+ G+++ C G RL+ W+KQPL N +N R +IVQ ++
Sbjct: 309 PGTHPSMPSYRWQSVLGVLDH-CRTPQGHRLMGQWVKQPLRSRNILNDRHNIVQCLLESP 367
Query: 362 ALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSS 420
+ L +LKRI DI L L +R+A LQ + ++YQ +R P I L + + +S
Sbjct: 368 DTMETLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKILKVLHELD---NS 424
Query: 421 LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESL 480
I+ P +S D L +VE VD + +E GEY++ +S+D+ L L+ L
Sbjct: 425 TIESVICAPFKSFLKD--LTGLKQMVEQVVDFEAIERGEYLVKASFDSRLMELQQMMTEL 482
Query: 481 ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK 540
++ L + + +L+L +KL+ + GH FRIT K++ +RK + +++ K
Sbjct: 483 YSKMEELQFKCSQELNLDGKNQVKLESVAKLGHHFRITVKDDSVLRK--NKNYRIVDVIK 540
Query: 541 DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLL 600
GV+FT+ KL+ D++ Y+ Q +V +I AV ++ L L++LD L+
Sbjct: 541 GGVRFTSDKLEGYADEFASCRTRYEEQQLSIVEEIIHVAVGYAAPLTLLNNELAQLDCLV 600
Query: 601 SFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQI 660
SFA A S PTPY RP + +++LE RHPC+E Q+ VNFI N + + I
Sbjct: 601 SFAIAARSAPTPYVRPKMLEEGARELVLEDVRHPCLELQEHVNFIANSVDFKKEECNMFI 660
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNMGGKST+IR VG +LMA +G+FVPC A+IS+ D I RVGA D ++G+STFM
Sbjct: 661 ITGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFM 720
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E + TLFATHFHE
Sbjct: 721 VEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHE 780
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN 840
+T LA + + V N H++A D+ T+LY+V PG ++SFGI VA AN
Sbjct: 781 ITKLA---------ETLSTVKNCHMAAVADADD--FTLLYQVRPGVMEKSFGIQVARLAN 829
Query: 841 FPESVVTLAREKAAELED 858
FPE VV A+E E ED
Sbjct: 830 FPEHVVQNAQEVYNEFED 847
>gi|194758569|ref|XP_001961534.1| GF14885 [Drosophila ananassae]
gi|190615231|gb|EDV30755.1| GF14885 [Drosophila ananassae]
Length = 917
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 334/873 (38%), Positives = 499/873 (57%), Gaps = 46/873 (5%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYY 59
E + P L +D R F+ + L P+ T VRFFD D YT HG ++ +AK Y
Sbjct: 7 ESRQEPTLHMDTNARRNFIKAHAKLGEKPSST--VRFFDHSDCYTVHGSDDCELVAKVVY 64
Query: 60 HTTTALRQL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSG 117
+T + L + L VS+SKN FE R+LLL R + +E++ ++W+L G
Sbjct: 65 KSTAYVGALIPDDKKETLQFVSLSKNNFELAVRELLLVR-NLRVEVFVKQATDWKLEYRG 123
Query: 118 TPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCT--IGLGYVDLTKRVLGLAEFLDD 175
+PGNL +ED+LFAN E+ I++L E G +G+ V+ L EFLDD
Sbjct: 124 SPGNLLQFEDILFANKEVLVGNSIISLLVKL-EGGAQRRVGVASVEQNDCQFQLLEFLDD 182
Query: 176 SHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
FT +E+ +V LG KECLLP+ + + KTL L R GVM+T KK+ DL+QD
Sbjct: 183 DFFTELEATVVLLGPKECLLPSLDGEYAAVKTL---LERNGVMITVPKKS--SANDLIQD 237
Query: 236 LDRLVR---GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
L+RL+R G E L ++A AL + Y +L++D N G+Y +++ L ++
Sbjct: 238 LNRLLRFAKGQQEDATGLKELQLQLASDALKVAIKYLDLVNDPGNLGHYELKQLDLKRFV 297
Query: 292 RLDSAAMRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNE 346
LDSAA+ ALN++ + + S+ G+++ C G RL+ W+KQPL
Sbjct: 298 HLDSAAVAALNIMPKPGTHPSMPSYRWQSILGVLDH-CRTPQGHRLMGQWVKQPLRRREI 356
Query: 347 INARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP 405
+ R ++V+ ++ + L +LKRI DI L L +R+A LQ + ++YQ +R P
Sbjct: 357 LTDRHNVVECLLEAPDTLETLSLDYLKRIPDILMLTKKLMRRKATLQDLFRIYQVILRTP 416
Query: 406 YIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSS 465
I L + E +S ++ P +S +D L +VE VD + +E GEY++ +S
Sbjct: 417 KILKVLFELE---NSTVESMICAPFKSFLED--LTGLKQMVEQVVDFEAIERGEYLVKAS 471
Query: 466 YDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
+D+ L L+ L ++ L + + +L+L + +KL+ + GH FRIT K++ +
Sbjct: 472 FDSRLMELQQTMTELYSKMERLQTKCSEELNLDGKQQVKLENVAKLGHHFRITLKDDSVL 531
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
RK + +++ K GV+FT+ KL+ +++ Y+ Q +V +IQ AV ++
Sbjct: 532 RK--NKNYRIVDVIKGGVRFTSDKLESYAEEFGSCRTRYEEQQLSIVEEIIQVAVGYAAP 589
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFI 645
SL L++LD L+SFA A S P PY RP + G ++LE RHPC+E Q+ V+FI
Sbjct: 590 LTSLNNELAQLDCLVSFAIAARSAPIPYVRPKMLEEGAGQLVLEDVRHPCLELQEHVSFI 649
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
N + + K IITGPNMGGKST+IR VG +LMA VG+FVPC A+I++ D I R
Sbjct: 650 ANSVEFKKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSSATITMVDSILGR 709
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D ++G+STFM EM+ET+ I++ AT++SL+IIDELGRGTSTY+G G+AW+I EHL
Sbjct: 710 VGASDNIIKGLSTFMVEMIETSGIIRTATEKSLVIIDELGRGTSTYEGCGIAWSIAEHLA 769
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+E + TLFATHFHE+T LA + + V N H++A D+ + T+LY+V PG
Sbjct: 770 KETKCFTLFATHFHEITKLA---------ESLATVKNCHMAAVADADN--FTLLYQVRPG 818
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
++SFGI VA A+FPE VV A+E E ED
Sbjct: 819 VMEKSFGIQVARLASFPEHVVQNAQEVYNEFED 851
>gi|47210390|emb|CAF91023.1| unnamed protein product [Tetraodon nigroviridis]
Length = 958
Score = 554 bits (1427), Expect = e-154, Method: Compositional matrix adjust.
Identities = 364/995 (36%), Positives = 528/995 (53%), Gaps = 140/995 (14%)
Query: 11 LKLDAKQARGFLSFYKTLPN--DTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQL 68
L +D+ GF++F ++P DT R FDR D+YT HG++A + AK + T ++ L
Sbjct: 9 LSMDSAAETGFVNFLLSMPEKPDT-TFRVFDRNDFYTVHGKDAIYAAKEVFKTNGVIKYL 67
Query: 69 GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSG-------SNWRLVKSGTPGN 121
G+GS L SV +SK FE +ARDLLL R + +E+Y+ +W+L +PGN
Sbjct: 68 GSGSRRLESVVLSKPNFEALARDLLLVR-QYRVEVYKNQNQSKSSKEQDWKLEFKASPGN 126
Query: 122 LGSYEDVLFANNEMQD--TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
L +E+VLF + + V+ + +GLGYVD +R++G+ EF D+ F+
Sbjct: 127 LTQFEEVLFGSGSGSEACAGVVAVRVAAGADGQRVVGLGYVDAAQRMMGVCEFPDNETFS 186
Query: 180 NVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
N+ES LV +G KECLL + S+E LR+ + R GV+++ERKK EF ++DLVQDL+RL
Sbjct: 187 NLESLLVQIGPKECLL-VQGEGSAEGSKLREVVQRGGVLVSERKKAEFNSKDLVQDLNRL 245
Query: 240 VR------GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
+R S + +L ++A L A + + ELLSDESN+G++ + L YMRL
Sbjct: 246 LRTRKGQAASSGTLPELEK--QVAVSCLAAAVRFLELLSDESNFGSFSLSSLDLAQYMRL 303
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D+AA+RALN+ + S DA SL GL+N+ C G+RLLH W+KQPLLD I RLD
Sbjct: 304 DNAAVRALNLFQGSPGDAAGTHSLAGLLNK-CRTPQGQRLLHQWIKQPLLDTTRIEERLD 362
Query: 353 IVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V++ V D+ LRQ ++ L+R D+ RL L ++ A LQ ++YQ+ +P + +AL
Sbjct: 363 LVESLVSDSELRQTCQEDLLRRFPDLHRLSKKLHRQSATLQDCYRVYQAVGHIPALVTAL 422
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD------------------ 453
++ G +L++ + PL L D K+ ++ET++D+
Sbjct: 423 DRHAGSHRTLLEAVFAAPLRDLQAD--FVKYQEMIETTLDMHQVTALWAPCPHAHGRRAV 480
Query: 454 ------QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDK 507
Q+E+ E++I +S+D LS L+ + + LE+ + ++ K A DL L K +KL+
Sbjct: 481 TVARCLQIEHHEFLIKASFDPVLSELRGKMDQLEKSMQAVLKSAARDLGLEAGKTVKLES 540
Query: 508 GTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN-------------------- 547
G R+T KEE +R +F +L+ +K+GV+FT+
Sbjct: 541 NAALGFYLRVTCKEEKALRN--NRKFTMLDVQKNGVRFTSRSVPLSCDPGGCGQLTVCSG 598
Query: 548 ----TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV--TFSEIFKSLATMLSELD---- 597
+KL + ++Y + EY+ Q +V +I A S D
Sbjct: 599 SRRCSKLSSVNEEYSRSRGEYEEAQDAIVKEIINIASGEPRRRRRPRPRLRGSAADAERR 658
Query: 598 -----VLLSFADLASSCPTPYTRPDINPPDVGD---IILEGSRHPCVEAQDWVNFIPNDC 649
++S A + S P PY RP + D +L+G RHPC+EA IPN+
Sbjct: 659 HGGWYAVVSLAVASVSAPVPYVRPRLLAKDQSPRRMQLLQG-RHPCMEADADTGLIPNEI 717
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
++G+ F IITG GV LMAQ+G FVPC++A +SV D I ARVGAG
Sbjct: 718 TFVQGEKSFYIITG-------------GVIALMAQIGCFVPCEKAELSVIDSILARVGAG 764
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D Q A+ SLIIIDELGRGTSTYDGFGLAWAI +H+ I
Sbjct: 765 DSQ-------------------SASAASLIIIDELGRGTSTYDGFGLAWAISQHVASRIG 805
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQ 829
LFATHFHELTALA Q V N HV+A ++ LTMLY+V PG CDQ
Sbjct: 806 CFCLFATHFHELTALA---------AQQPAVHNLHVTAL--TSQDALTMLYRVRPGVCDQ 854
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG 889
SFGIHVAE A FP +VV +A+EKA ELE+F A ++ +R+R D G
Sbjct: 855 SFGIHVAEMAGFPPAVVAMAKEKAEELEEFQEPAGETEQEDGPQAKRRRR-----DKQLG 909
Query: 890 AARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
FL + +P+ TM E ++R+K +L
Sbjct: 910 EKLIQDFLDQARALPVSTMSDDEVKAELRRLKQEL 944
>gi|195033817|ref|XP_001988769.1| GH11346 [Drosophila grimshawi]
gi|193904769|gb|EDW03636.1| GH11346 [Drosophila grimshawi]
Length = 918
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 340/870 (39%), Positives = 494/870 (56%), Gaps = 49/870 (5%)
Query: 9 PELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHTTTA 64
P L LD R F+ FY L P+ T VRF+D D YT HG ++ +AK Y +
Sbjct: 12 PVLHLDTNARRNFIKFYNKLGEKPSST--VRFYDHTDCYTVHGGDDCEQVAKIVYKSMAY 69
Query: 65 LRQL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
+ L + L V++SK+ FE RDLLL R + +E+Y W+L G+PGNL
Sbjct: 70 VHPLLKEDKKETLQYVAMSKSNFELAVRDLLLVR-NLRVEVYVKR-EEWQLEYRGSPGNL 127
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCT---IGLGYVDLTKRVLGLAEFLDDSHFT 179
+ED+LFAN E+ I++L + G T +G+ V+ L EF+DD FT
Sbjct: 128 LQFEDILFANKEVLVGNSIISL--QVKLEGGTMRRVGVAAVEQNDCTFQLLEFVDDDFFT 185
Query: 180 NVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTR-DLVQDLDR 238
+E+ +V LG KECLLP+ + + K L L R GVM+T K++ R DL+QDL+R
Sbjct: 186 ELEATVVLLGPKECLLPSADGEYTAVKAL---LERNGVMITLPKRSSAAERNDLLQDLNR 242
Query: 239 LVR---GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L+R G E L ++A AL + Y +L++D N G+Y +R+ L ++ LD
Sbjct: 243 LLRFAKGQQEDANGLKELQMQLAAEALRVAIKYLDLVNDAGNLGHYEMRQLDLKRFVHLD 302
Query: 295 SAAMRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
SAA+ ALN++ + + S+ G+++ C G RL+ W+KQPL ++ +N
Sbjct: 303 SAAVAALNIMPKPGTHPTMPSYRWQSILGVLDH-CRTPQGHRLMSQWVKQPLRSLDILND 361
Query: 350 RLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIR 408
R +IVQ ++ L LKRI DI L L +R+A LQ + ++YQ +R P I
Sbjct: 362 RHNIVQCLLEAPETLDTLSLDFLKRIPDILMLTKKLMRRKASLQDLFRVYQVILRTPKIL 421
Query: 409 SALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDT 468
L E S ++ P++S +D L +VE VD + +E GEY++ S+D+
Sbjct: 422 QLLLDLE---HSTVQSVLCAPIKSFLED--LTGLKQMVEQVVDFEAIEKGEYLVKGSFDS 476
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKK 528
L L+ L ++ L ++ +LDL K +KL+ + G+ FR T K++ +RK
Sbjct: 477 RLMELQQTMTELYSKMERLQRKCCDELDLD-SKLIKLENVAKLGYHFRTTLKDDSVLRK- 534
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+ +++ K GV+FT+ KL+ D++ Y+ Q+ +V+ +IQ AV ++ S
Sbjct: 535 -NKNYRIVDVIKGGVRFTSDKLESYADEFASCRTRYEEQQQSIVDEIIQVAVGYAAPLTS 593
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPND 648
L L++LD L+SFA A PTPY RP + P G ++LE RHPC+E Q+ V+FI N
Sbjct: 594 LNNELAQLDCLVSFATAARCAPTPYVRPKMLPEGAGQLLLEDVRHPCLELQEHVSFIANS 653
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
+ K IITGPNMGGKST+IR VG +LMA VG+FVPC A+IS+ D I RVGA
Sbjct: 654 VAFEKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSVATISMVDSILGRVGA 713
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
D ++G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E
Sbjct: 714 SDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKET 773
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACD 828
+ TLFATHFHE+T LA + + V N H++A D + T+LY+V G +
Sbjct: 774 KCFTLFATHFHEITKLA---------ETLPTVKNCHMAAVADKDN--FTLLYQVRAGVME 822
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELED 858
+SFGI VA ANFPE VV A+E E ED
Sbjct: 823 KSFGIQVARLANFPEHVVQNAQEVYNEFED 852
>gi|195436947|ref|XP_002066407.1| GK18274 [Drosophila willistoni]
gi|194162492|gb|EDW77393.1| GK18274 [Drosophila willistoni]
Length = 917
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 337/867 (38%), Positives = 494/867 (56%), Gaps = 45/867 (5%)
Query: 9 PELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHGENAT-FIAKTYYHTTTA 64
P L +D R F+ F+ L P+ T VRFFD+ D YT HG + T +AK Y +T
Sbjct: 12 PVLHMDTNARRNFIKFHAKLGEKPSTT--VRFFDQTDCYTVHGSDDTELVAKIVYKSTAY 69
Query: 65 LRQL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
+ L + L V++SK FE R+LLL R + +E+Y + W+L G+PGNL
Sbjct: 70 VHPLMPDDKKEGLQFVAMSKGNFELAVRELLLVR-NLRVEVYVKR-TEWQLEYRGSPGNL 127
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+ED+LFAN E+ I++L +G+ V+ + L EFLDD FT +
Sbjct: 128 LQFEDILFANKEVLVGNSIISLQVKLVAGQQRRVGVAAVEQNDCLFQLLEFLDDDFFTEL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ +V LG KECLLP E +++ L R GVM+T KK+ DL+QDL+RL+R
Sbjct: 188 EATIVLLGPKECLLPQ---LEGEYASVKTVLERNGVMVTVPKKS--SNDDLLQDLNRLLR 242
Query: 242 ---GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E L +A AL + Y +L++D N G+Y +++ L ++ LDSAA
Sbjct: 243 FAKGQQEEANGLKELQMVLAAEALRVAIKYLDLVNDAGNLGHYELKQLDLKRFVHLDSAA 302
Query: 298 MRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
+ ALN++ + + S+ G+++ C G RL+ W+KQPL ++ +N R +
Sbjct: 303 VAALNIMPKPGTHPSQPSYRWQSILGVLDH-CRTPQGHRLMAQWVKQPLRSLSLLNDRHN 361
Query: 353 IVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
IVQ ++ L +LKRI DI L L +R+A LQ + ++YQ +R P I AL
Sbjct: 362 IVQCLLESPDTLDLLSLDYLKRIPDILMLTKKLMRRKATLQDLFRIYQVILRTPKILKAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+ E + ++ DP +S +D L +VE VD + +E EY++ +S+D+ L
Sbjct: 422 LELE---HATVQSVLCDPFKSFLED--LTGLKQMVEQVVDFEGIERSEYLVKASFDSRLM 476
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ L ++ L + +LDL + KL+ + G+ FRIT K++ +RK
Sbjct: 477 ELQETMSELYSKMERLQSKCNEELDLDGKQQAKLENVAKLGYHFRITLKDDSILRK--NK 534
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
+ +++ K GV+FT+ KL+ +++ Y+ Q+ +V +IQ AV ++ SL
Sbjct: 535 NYRIVDVIKGGVRFTSDKLESYAEEFASCRTRYEEQQQSIVEEIIQVAVGYAAPLTSLNN 594
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKL 651
L++LD L+SFA A S PTPY RP + G ++LE RHPC+E Q+ V+FI N
Sbjct: 595 ELAQLDCLVSFAAAARSAPTPYIRPQMLEEGSGRLVLEDVRHPCLELQEHVSFIANSVDF 654
Query: 652 IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDC 711
+ IITGPNMGGKST+IR VG +LMA VG+FVPC +A IS+ D I RVGA D
Sbjct: 655 EKDVCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSKAIISMVDSILGRVGASDN 714
Query: 712 QLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP 771
++G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E +
Sbjct: 715 IIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCF 774
Query: 772 TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSF 831
TLFATHFHE+T LA + V N H++A D+T+ T+LY+V+PG ++SF
Sbjct: 775 TLFATHFHEITKLA---------DNLSTVKNCHMAAVADTTN--FTLLYQVKPGCMEKSF 823
Query: 832 GIHVAEFANFPESVVTLAREKAAELED 858
GI VA ANFPE VV A+E E ED
Sbjct: 824 GIQVARLANFPEHVVQNAQEVYHEFED 850
>gi|195115750|ref|XP_002002419.1| GI12901 [Drosophila mojavensis]
gi|193912994|gb|EDW11861.1| GI12901 [Drosophila mojavensis]
Length = 919
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 339/870 (38%), Positives = 495/870 (56%), Gaps = 49/870 (5%)
Query: 9 PELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHTTTA 64
P L+LD R F+ F+ L P+ T VRF+D+ D YT HG ++ +AK Y +T
Sbjct: 12 PVLRLDTNARRNFIKFHNKLGEKPSTT--VRFYDQTDCYTVHGSDDCEQVAKIVYKSTAY 69
Query: 65 LRQL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
+ +L + L V++SK FE R+LLL R + +E+Y +W+L G+PGNL
Sbjct: 70 VHKLLPDDKQETLQFVAMSKPNFELAVRELLLVR-NLRVEVYVKR-DDWQLEYRGSPGNL 127
Query: 123 GSYEDVLFANNEMQDTPVIVALFPNFRENGCT--IGLGYVDLTKRVLGLAEFLDDSHFTN 180
+ED+LFAN E+ I++L E G +G+ V+ L EF+DD FT
Sbjct: 128 LQFEDILFANKEVLVGNSIISLQIKL-EGGAQRRVGVAAVEQNDCQFQLFEFVDDDFFTE 186
Query: 181 VESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTR-DLVQDLDRL 239
+E+ +V LG KECLLPT E ++ L R GVM+T K+ R DL+QDL+RL
Sbjct: 187 LEATVVLLGPKECLLPT---ADGEYAAVKAMLERNGVMITVPKRGNAAERNDLLQDLNRL 243
Query: 240 VRGSVEPVRDLVSGF-----EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
+R + D SG ++A AL ++Y +L++D N G+Y +++ L ++ LD
Sbjct: 244 LRFAKGQQED-ASGLKELQMQLAAEALRVAINYLDLVNDAGNLGHYELKQLDLKRFVHLD 302
Query: 295 SAAMRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
SAA+ ALN++ + + S+ G+++ C G RL+ W+KQPL +N
Sbjct: 303 SAAVAALNIIPKPGTHPSMPSYRWQSILGVLDH-CRTPQGHRLMAQWVKQPLRSAEILND 361
Query: 350 RLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIR 408
R DIVQ ++ L +LKRI DI L L +R+A LQ + ++YQ +R P I
Sbjct: 362 RHDIVQCLLESPETLDTLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKI- 420
Query: 409 SALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDT 468
LQ S ++ P + +D L +VE VD + +E GEY++ S++D
Sbjct: 421 --LQLLLSLGHSTVQSVLCAPFKGFLED--LTGLKQMVEQVVDFEAIEKGEYLVKSTFDG 476
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKK 528
L L+ L ++ + + + +LDL K +KL+ + G+ R T K++ +RK
Sbjct: 477 RLMDLQQTMTELYNKMERIRDKCSEELDLD-GKLIKLENVAKLGYHLRTTIKDDSVLRK- 534
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
F +++ K GV+FT+ KL+ D++ + Y+ Q+ +V +IQ AV ++ S
Sbjct: 535 -NKNFRIVDVIKGGVRFTSDKLEGYADEFTSLRARYEEQQQSIVEEIIQVAVGYAAPLTS 593
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPND 648
L L++LD L+SFA A S PTPY RP + P G ++LE RHPC+E Q+ V+FI N
Sbjct: 594 LNNELAQLDCLVSFAIAARSAPTPYVRPKMLPEGAGQLLLEDVRHPCLELQEHVSFIANS 653
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
+ + K IITGPNMGGKST+IR VG +LMA VG+FVPC A IS+ D I RVGA
Sbjct: 654 VEFEKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSLAKISMVDSILGRVGA 713
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
D ++G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E
Sbjct: 714 SDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKET 773
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACD 828
+ TLFATHFHE+T LA + + V N H++A D + T+LY+V PG +
Sbjct: 774 KCFTLFATHFHEITKLA---------ETLSTVKNCHMAAVADEDN--FTLLYQVRPGVME 822
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELED 858
+SFGI VA ANFPE VV A+E E ED
Sbjct: 823 KSFGIQVARLANFPEQVVHNAQEVYNEFED 852
>gi|195397830|ref|XP_002057531.1| GJ18185 [Drosophila virilis]
gi|194141185|gb|EDW57604.1| GJ18185 [Drosophila virilis]
Length = 918
Score = 547 bits (1410), Expect = e-152, Method: Compositional matrix adjust.
Identities = 336/869 (38%), Positives = 491/869 (56%), Gaps = 47/869 (5%)
Query: 9 PELKLDAKQARGFLSFYKTLPNDTRA-VRFFDRRDYYTAHG-ENATFIAKTYYHTTTALR 66
P L LD R F+ FY L R+ VRF+D+ D YT HG ++ +AK Y +T +
Sbjct: 12 PVLHLDTNARRNFIKFYNKLGEKPRSTVRFYDQTDCYTVHGSDDCEQVAKIVYKSTAYVH 71
Query: 67 QL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGS 124
L + L V++SK FE RDLLL R + +E+Y + W+L G+PGNL
Sbjct: 72 PLLPDDKQETLQYVAMSKANFELAVRDLLLVR-NLRVEVY-VRRTEWQLEYRGSPGNLLQ 129
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCT---IGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+ED+LFAN E+ I++L + G T +G+ V+ L EF+DD FT +
Sbjct: 130 FEDILFANKEVLVGNTIISL--QVKLEGGTQRRVGVAAVEQNDCSFQLLEFVDDDFFTEL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTR-DLVQDLDRLV 240
E+ +V LG KECLLP+ + + KTL L R GVM+T K+ R DL+QDL+RL+
Sbjct: 188 EATVVLLGPKECLLPSADGEYTAVKTL---LERNGVMITVPKRGSAAERNDLLQDLNRLL 244
Query: 241 RGSVEPVRDLVSG-----FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
R + D +G ++A AL + Y +L++D N G+Y +++ L ++ LDS
Sbjct: 245 RFAKGQQED-ANGRKELQMQLAAEALRVAIRYLDLINDAGNLGHYELKQLDLKRFVHLDS 303
Query: 296 AAMRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
AA+ ALN++ + + S+ G+++ C G RL+ W+KQPL +N R
Sbjct: 304 AAVAALNIMPKPGTHPTMPSYRWQSILGVLDH-CRTPQGHRLMAQWVKQPLRSSEILNDR 362
Query: 351 LDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS 409
+IVQ ++ L +LKRI DI L L +R+A LQ + ++YQ +R P I
Sbjct: 363 HNIVQCLLESPETLDTLSMDYLKRIPDILMLTKKLMRRKASLQDLFRIYQVILRTPKILQ 422
Query: 410 ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
L E S ++ P +S +D L +VE VD + +E GEY++ S++D
Sbjct: 423 LLLSLE---HSTVQSVLCAPFKSFLED--LTGLKQMVEQVVDFESIEKGEYLVKSTFDNR 477
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L L+ L ++ L + +LDL K +KL+ + G+ R T K++ +RK
Sbjct: 478 LMELQQTMTELYNKMERLQNKCCEELDLD-GKMVKLENVAKLGYHLRTTIKDDSVLRK-- 534
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
+ +++ K GV+FT+ KL+ D++ Y+ Q+ +V +IQ AV ++ SL
Sbjct: 535 NKNYRIVDVIKGGVRFTSDKLESYADEFASCRTRYEEQQQSIVEEIIQVAVGYAAPLTSL 594
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
L++LD L+SFA A PTPY RP + G ++LE RHPC+E Q+ V+FI N
Sbjct: 595 NNELAQLDCLVSFAIAARCAPTPYVRPKMLAEGAGKLLLEDVRHPCLELQEHVSFIANSV 654
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
+ K IITGPNMGGKST+IR VG +LMA VG+FVPC A+IS+ D I RVGA
Sbjct: 655 AFEKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCSMATISMVDSILGRVGAS 714
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D ++G+STFM EM+ET+ I++ AT++SL+IIDELGRGTSTY+G G+AW+I EHL ++ +
Sbjct: 715 DNIIKGLSTFMVEMIETSGIIRTATEKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKQTK 774
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQ 829
TLFATHFHE+T LA + + V N H++A D + T+LY+V PG ++
Sbjct: 775 CFTLFATHFHEITKLA---------ETLPTVKNVHMAAVADEDN--FTLLYQVRPGVMEK 823
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELED 858
SFGI VA ANFPE VV A+E E ED
Sbjct: 824 SFGIQVARLANFPEHVVQNAQEVYNEFED 852
>gi|194389128|dbj|BAG61581.1| unnamed protein product [Homo sapiens]
Length = 720
Score = 540 bits (1392), Expect = e-150, Method: Compositional matrix adjust.
Identities = 300/718 (41%), Positives = 427/718 (59%), Gaps = 66/718 (9%)
Query: 208 LRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSY 267
LR + R G+++TERKK +F T+D+ QDL+RL++G
Sbjct: 49 LRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGK------------------------ 84
Query: 268 AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAG 327
+++SA + + S D + SL L+N+ C
Sbjct: 85 ---------------------KGEQMNSAVLPEMENQGSVEDTTGSQSLAALLNK-CKTP 122
Query: 328 MGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEK 386
G+RL++ W+KQPL+D N I RL++V+AFV+D LRQ L++ L +R D+ RL ++
Sbjct: 123 QGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQR 182
Query: 387 RRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALV 446
+ A LQ +LYQ +LP + AL+++EG+ L+ ++ PL L D +KF ++
Sbjct: 183 QAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMI 240
Query: 447 ETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
ET++D+DQ+EN E+++ S+D LS L+ LE+++ S A DL L K +KLD
Sbjct: 241 ETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLD 300
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
QFG+ FR+T KEE +R F ++ +K+GVKFTN+KL L ++Y K EY+
Sbjct: 301 SSAQFGYYFRVTCKEEKVLRN--NKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEE 358
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI 626
Q +V ++ + + E ++L +L++LD ++SFA +++ P PY RP I G I
Sbjct: 359 AQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRI 418
Query: 627 ILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
IL+ SRH CVE QD + FIPND + K F IITGPNMGGKST+IRQ GV +LMAQ+G
Sbjct: 419 ILKASRHACVEVQDEIAFIPNDVYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIG 478
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
FVPC+ A +S+ DCI ARVGAGD QL+GVSTFM EMLETASIL+ AT SLIIIDELGR
Sbjct: 479 CFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGR 538
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDGFGLAWAI E++ +I A +FATHFHELTALA+ Q+ V N HV+
Sbjct: 539 GTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALAN---------QIPTVNNLHVT 589
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVIS 866
A +T LTMLY+V+ G CDQSFGIHVAE ANFP+ V+ A++KA ELE+F
Sbjct: 590 AL--TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQ 647
Query: 867 DDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+E +K+ + + +G +FL + MP M + ++K++K ++
Sbjct: 648 GYDIMEPAAKKCYL----EREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 701
>gi|198473172|ref|XP_001356195.2| GA18039 [Drosophila pseudoobscura pseudoobscura]
gi|198139335|gb|EAL33255.2| GA18039 [Drosophila pseudoobscura pseudoobscura]
Length = 914
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 335/873 (38%), Positives = 496/873 (56%), Gaps = 49/873 (5%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYY 59
E + P L +D R F+ ++ L P+ T VRF+D D YT +G ++ +AK Y
Sbjct: 7 ESRREPTLHMDTNARRNFIKYHAKLGEKPSTT--VRFYDHSDCYTVNGSDDCELVAKIVY 64
Query: 60 HTTTALRQL-GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGT 118
+T + L + L V++SK FE R+LLL R + +E+Y + W+L G+
Sbjct: 65 KSTAFIGALLPDDKETLQFVALSKGNFEMAVRELLLVR-NLRVEVYVKR-NEWQLEYRGS 122
Query: 119 PGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCT--IGLGYVDLTKRVLGLAEFLDDS 176
PGNL +ED+LFAN E+ +++L E G +G+ V+ L EFLDD
Sbjct: 123 PGNLLQFEDILFANKEVLVGNNMISLQVKL-EGGAQRRVGVASVEQNDCQFQLLEFLDDD 181
Query: 177 HFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
FT +E+ +V LG KECLLP+ + K L L R GVM+T KK+ DL+QDL
Sbjct: 182 FFTELEATVVLLGPKECLLPSVEGEYVPVKAL---LERNGVMITVPKKS--SANDLLQDL 236
Query: 237 DRLVRGSVEPVRDLVSGFE-----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
+RL+R + D +G + +A +L + Y +L++D N G+Y I++ L ++
Sbjct: 237 NRLLRFAKGQQED-ATGLKELQMLLASESLKVAIKYLDLVNDAGNLGHYEIKQLDLKRFV 295
Query: 292 RLDSAAMRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNE 346
LDSAA+ ALN++ + + S+ G+++ C G RL+ W+KQPL
Sbjct: 296 HLDSAAVGALNIMPKPGTHPSMPSYRWQSILGVLDH-CRTPQGHRLMGKWVKQPLRSQEI 354
Query: 347 INARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP 405
+N R +IV+ ++ + + L +LKRI DI L L +R+A LQ + ++YQ +R P
Sbjct: 355 LNDRHNIVECLLESSDTLESLSLDYLKRIPDILMLTKKLMRRKATLQDLFRIYQVILRTP 414
Query: 406 YIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSS 465
I L E +S ++ P +S +D L +VE VD + +E GEY++ SS
Sbjct: 415 KIVQVLLSLE---NSTVESVICSPFKSFLED--LTGLKQMVEQVVDFEAIERGEYLVKSS 469
Query: 466 YDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
+D+ L L+ L ++ L + +LDL K +KL+ + G+ FR T K++ +
Sbjct: 470 FDSRLMELQQTMNELYDKMERLKSKCNDELDLD-SKQIKLENVAKLGYHFRTTLKDDSVL 528
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
RK + +++ K GV+FT+ KL+ D++ Y+ Q +V +IQ AV ++
Sbjct: 529 RK--NKNYRIVDVIKGGVRFTSDKLEGYADEFASCHSRYEEQQLSIVEEIIQVAVGYAAP 586
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFI 645
SL L++LD L+SFA A S PTPY RP++ G ++L RHPC+E Q+ V+FI
Sbjct: 587 LTSLNNELAQLDCLVSFAIAARSAPTPYVRPNMLAEGAGKLVLTDVRHPCLELQEHVSFI 646
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
N + K IITGPNMGGKST+IR VG +LMA VG+FVPC A+IS+ D I R
Sbjct: 647 ANSVYFKKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCGMATISMVDSILGR 706
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D ++G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL
Sbjct: 707 VGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLA 766
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+E + TLFATHFHE+T LA + + V N H++A D+ + T+LY+V PG
Sbjct: 767 KETKCFTLFATHFHEITKLA---------ETLPTVKNCHMAALADADN--FTLLYQVRPG 815
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
++SFGI VA ANFPE VV A+E E ED
Sbjct: 816 VMEKSFGIQVARLANFPEDVVQNAQEVYNEFED 848
>gi|344305584|gb|EGW35816.1| hypothetical protein SPAPADRAFT_48774 [Spathaspora passalidarum
NRRL Y-27907]
Length = 991
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 353/966 (36%), Positives = 525/966 (54%), Gaps = 99/966 (10%)
Query: 9 PELKL-DAKQARGFLSFYKTLP-NDTRAVRFFDR-RDYYTAHGENATFIAKTYYHTTTAL 65
P+LK D R + Y LP D+ +RF D +DY+TA E+A IA Y T + +
Sbjct: 6 PDLKFTDNGDERSYYRKYSQLPPKDSFVIRFIDHNKDYFTALDEDADLIADNIYKTQSVI 65
Query: 66 RQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSY 125
+ + V++S +F L +E+Y + ++L+ + T GNL +
Sbjct: 66 KYNQQNKNRY--VTISHQVFTNNVLKFCLIDKHLKVEIY--NNKTFKLITAATAGNLQAI 121
Query: 126 EDVLFANNE--MQD--TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+ N E QD P+ A+ G +G+ +D++ + L+EF D+ ++N+
Sbjct: 122 SEEYEVNLEGMFQDCSNPITAAVKFQSGATGKKVGVCLIDVSNSSILLSEFDDNELYSNL 181
Query: 182 ESALVALGCKECLLPT-----EAVKSSECKTLRDALTRCG-VMLTERKKTEFKTRDLVQD 235
ES ++ LG KE +LP+ E + E L L + G ++++ K + F +D+ QD
Sbjct: 182 ESLMLQLGVKEVILPSNYNPQEENSNPEIIKLFQVLDKIGNIVVSAAKSSSFNHKDIEQD 241
Query: 236 LDRLV------RGSVEPVRDLVS------GFEIAPGALGALLSYAELLSDESNYGNYYIR 283
L +LV ++E L S F ++ AL+ Y +LL + + + I
Sbjct: 242 LTKLVVDEDDNESTIELT--LTSKGINSLDFPLSLSCCNALIQYLDLLGELNTDKAFTIN 299
Query: 284 KYSLDSYMRLDSAAMRALNVLES------KTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
KY+L ++M+LDS+ M+ALN+ K+ + S+F L+N+ C G RLL WL
Sbjct: 300 KYNLSNFMKLDSSTMKALNIFPQAGSSTYKSSSGNITSIFELLNK-CKTTAGSRLLSQWL 358
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLE--------KRR 388
KQPL ++N I R +V+ +++T LR + Q L ++ DI+RL N+
Sbjct: 359 KQPLTNLNLIQERQALVELLIENTGLRVAVTQDILPQVPDIKRLTKNIALNIHKATGNEN 418
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQY------EGQFSSLIKERYLDPLESLTDDDHLNKF 442
L +VKLYQ + LP + L + + S IK+ +LDP+E L KF
Sbjct: 419 KKLDDVVKLYQMVLTLPNLIDTLTTTLSESSDQEELKSYIKKYWLDPIEKYYQS--LTKF 476
Query: 443 IALVETSVDLDQLENGEYM-----ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
LV+T++DL L++G+ + I +D+ L + N+ +S I LH A DL++
Sbjct: 477 AELVQTTIDLSPLDSGDLLHNDFNIRPEFDSSLVEINNKLQSSLANIKQLHADVADDLNM 536
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
VDK LKL+K Q G FR+T+ + +R K ++ L+T K GV FT +L L +Y
Sbjct: 537 EVDKKLKLEKHIQHGWCFRVTRIDSVVLRNK-GKKYNELQTVKAGVFFTTKELVGLSQEY 595
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
EY QKEL+ V++ A+T+S +F +L+ L+ LDVL SFA++A PT Y +P
Sbjct: 596 YDSYHEYNQKQKELIKEVLEIALTYSSVFLNLSLSLAHLDVLNSFANVAVIAPTAYVKPK 655
Query: 618 INP--PDVGDI-------ILEGSRHPCVEAQDWVNFIPNDCKL-----IRGKSWFQIITG 663
+ P +V + L+ +RHP +E QD +NFI ND L +GKS F IITG
Sbjct: 656 LQPLASEVESVEFTNRKLQLQEARHPLLEVQDDINFIANDVFLSNDSNAKGKS-FVIITG 714
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRA----SISVRDCIFARVGAGDCQLRGVSTF 719
PNMGGKST+IRQ+GV LM+Q+G F+P I + D I +RVGAGD QL+G+STF
Sbjct: 715 PNMGGKSTYIRQIGVIALMSQIGCFIPASDVDFIPEIPIFDAILSRVGAGDSQLKGLSTF 774
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M EMLET+SIL AT SLIIIDELGRGTSTYDGFGLAW+I EHL+ + +LFATHFH
Sbjct: 775 MIEMLETSSILATATHNSLIIIDELGRGTSTYDGFGLAWSISEHLISSKQCFSLFATHFH 834
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK----LTMLYKVEPGACDQSFGIHV 835
EL L+ + N+ V N HV AH++ T K +T++YKVEPG D+SFGIHV
Sbjct: 835 ELNQLSEKYPNK--------VDNLHVVAHLEKTDAKEDDDITLMYKVEPGISDKSFGIHV 886
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIE-VGSKRKRISDPNDMSRGAARAH 894
AE FP ++ +A+ KA+EL++ DDA E + SKR + S P +++ G +
Sbjct: 887 AELVKFPTKIINMAKRKASELQEEK-----QDDADNEYIQSKRTKCS-PEEVTTGVKKLK 940
Query: 895 QFLKEF 900
LK +
Sbjct: 941 SILKSW 946
>gi|294655493|ref|XP_002770136.1| DEHA2B15818p [Debaryomyces hansenii CBS767]
gi|199430000|emb|CAR65505.1| DEHA2B15818p [Debaryomyces hansenii CBS767]
Length = 999
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 362/1004 (36%), Positives = 559/1004 (55%), Gaps = 124/1004 (12%)
Query: 9 PELKL-DAKQARGFLSFYKTLP-NDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTA 64
P+LK D R + Y LP ++ +R D +DY+TA E+A IA Y T +
Sbjct: 6 PDLKFADTGDERQYYRKYSNLPPKESTTIRIIDHNNKDYFTALDEDADLIADNIYKTQSV 65
Query: 65 LRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGS 124
++ T + V++S +F L ++ +E+Y + +++V TPGNL +
Sbjct: 66 VKYNQTHKNKY--VTISPQVFTNNVLRFCLIDNNYKVEIY--NSKTFQIVTMATPGNLEN 121
Query: 125 YEDVLFAN--NEMQD--TPVIVALFPNFRENGCT--IGLGYVDLTKRVLGLAEFLDDSHF 178
+ N N ++D +P+I + +++ G + IG+ +DL+ + ++EF D+ F
Sbjct: 122 LSNEYGINLENMIKDFSSPMIAGI--KYQQVGSSKKIGICLIDLSNNNIQVSEFDDNDLF 179
Query: 179 TNVESALVALGCKECLLPTE---AVKSSECKTLRDALTRCG-VMLTERKKTEFKTRDLVQ 234
+N+ES L+ LG KE +LP+ +++E L L + G ++++ K + F +D+ Q
Sbjct: 180 SNLESLLLQLGVKEVILPSNYDPQDENNEVIKLYQVLDKIGGIVISSVKSSLFTNKDIEQ 239
Query: 235 DLDRLVRGSVEPVRDLVSGFEIAPGALG--------------ALLSYAELLSDESNYGNY 280
DL + + + E + E+ G+ G ALL Y +L + ES N+
Sbjct: 240 DLGKFITTTNE-----ANNIEVVLGSKGISSIEYSLSFSCCNALLHYLDLFTQES--PNF 292
Query: 281 YIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--------SLFGLMNRTCTAGMGKRL 332
I KY+L S+M+LDS+ M+ALN+ +++ ++ N S+F L+N+ C +G RL
Sbjct: 293 TIDKYNLSSFMKLDSSTMKALNIFPTQSSSSNNLITKSSNVTSIFELLNK-CKTSVGSRL 351
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLE---KRR 388
L WLKQPL ++ EIN R +V ++DT LR L Q L +I D++RL+ + K+
Sbjct: 352 LSQWLKQPLTNLVEINERHLLVNHLMEDTNLRVFLSQDWLPQIPDVKRLLKKISNGIKKT 411
Query: 389 AG-----LQQIVKLYQSSIRLPYIRSALQQYEGQFSS------LIKERYLDPLESLTDDD 437
G L+ +++LYQ + LP + L G+ ++ LIK+ +LDP+ + +
Sbjct: 412 VGNENKKLEDVIRLYQLVLVLPQLIDHLSNIVGEENNGDDVKLLIKKYWLDPVSK--NYE 469
Query: 438 HLNKFIALVETSVDLDQLE--------NGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
L K+ LVET++DL LE N ++ I +D L A+ + ++ I + H
Sbjct: 470 SLIKYQELVETTIDLSPLESSSAHDLLNTDFNIKPEFDESLIAINDNLQATLSNIKNCHI 529
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ + DL + ++K LKL+K Q G FR+T+ + +R +I L+T K GV FT+
Sbjct: 530 EVSEDLGIELEKKLKLEKHQQHGWCFRVTRNDSSVLRNT-GNNYIELQTVKAGVFFTSKS 588
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
L+ L ++YQ+ EY + Q+EL+ ++ T+ +F SL+ L LDVL SFA++A
Sbjct: 589 LRSLSEKYQEFSGEYNSKQRELIKEILSITSTYQSVFTSLSLTLGHLDVLASFANVAIFA 648
Query: 610 PTPYTRPDINPPDVG---------DIILEGSRHPCVEAQDWVNFIPNDCKLI-------- 652
P PY +P ++P I LE +RHP +E QD +NFI ND L
Sbjct: 649 PIPYVKPMLHPLSSSIESDEHKQRKIKLEEARHPVLEVQDDINFIANDVYLSTPNAEADS 708
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS----ISVRDCIFARVGA 708
+GK F IITGPNMGGKST+IRQVGV LM+QVGSFVP S I + D I +RVGA
Sbjct: 709 KGKP-FVIITGPNMGGKSTYIRQVGVIALMSQVGSFVPASEDSSAPEIPIFDAILSRVGA 767
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
GD QL+G+STFM EMLET+SIL AT SLII+DELGRGTSTYDGFGLAW+I EHL+ E
Sbjct: 768 GDSQLKGLSTFMIEMLETSSILATATHNSLIIVDELGRGTSTYDGFGLAWSISEHLISEK 827
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI-------DSTSRKLTMLYK 821
TLFATHFHELT L A ++N K V+N HV AH+ D +T++YK
Sbjct: 828 HCFTLFATHFHELTEL----ATKYNDK----VSNLHVVAHVEKNDEQNDENEDDITLMYK 879
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS 881
VEPG D+SFGIHVAE FP +V +A+ KA+EL++ S I +D I+ +KR + S
Sbjct: 880 VEPGISDKSFGIHVAELVKFPNKIVNMAKRKASELQN---SNSIDEDQYIQ--NKRTKCS 934
Query: 882 DPNDMSRGAARAHQFLKEFSDMPLE-----TMDLKEALERVKRM 920
++++ G + LK++ + + +++ +EA++ +K++
Sbjct: 935 G-DEITSGINNLKEILKKWKTICYDSDSKCSVESEEAVQILKKL 977
>gi|448118917|ref|XP_004203603.1| Piso0_000618 [Millerozyma farinosa CBS 7064]
gi|359384471|emb|CCE78006.1| Piso0_000618 [Millerozyma farinosa CBS 7064]
Length = 995
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 346/971 (35%), Positives = 536/971 (55%), Gaps = 98/971 (10%)
Query: 7 KLPELK-LDAKQARGFLSFYKTLP-NDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTT 62
K P+LK +D + R + Y+ LP + +R D +DY+TA E+A IA Y T
Sbjct: 4 KRPDLKFVDNGEERSYYKRYENLPEKEPSVIRIIDHNNKDYFTALDEDADLIADNIYKTQ 63
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
+ ++ + S V++S + L + +E+Y+ + L+ S TPGNL
Sbjct: 64 SIIKY--SQSKKHRYVTISPQVLLNNVLKFCLVDNSYKVEIYQNK--TFDLIISATPGNL 119
Query: 123 GSYEDVLFANNEMQ----DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHF 178
S N E +PVI A+ + +G+ +DL+ ++ L EF D+ F
Sbjct: 120 ESLSSEYGVNLEGMFSDCSSPVIAAVKYVQQSGQKKVGVCMIDLSNNLMQLCEFEDNELF 179
Query: 179 TNVESALVALGCKECLLPTEAVKS---SECKTLRDALTRCG-VMLTERKKTEFKTRDLVQ 234
+N+ES ++ G KE +LP+ S S+ L L + G ++L+ K + F ++D+ Q
Sbjct: 180 SNLESLILQTGIKEIVLPSNYEPSETGSDNIKLFQVLDKIGNLVLSTAKSSLFTSKDIEQ 239
Query: 235 DLDRLVRGSVE--PVRDLVSG-------FEIAPGALGALLSYAELLSDESNYGNYYIRKY 285
DL + + S E V +++ F + ALL+Y +L S +S ++ + KY
Sbjct: 240 DLSKFIATSNELNNVEAVLASKGINSVEFSTSLSCCNALLNYLDLFSSDS--ASFTVEKY 297
Query: 286 SLDSYMRLDSAAMRALNVLESK--------TDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
+L +YM+LDS+AM+ALN+ S+ T N S+F L+N+ C G RLL WL
Sbjct: 298 TLSAYMKLDSSAMKALNIFSSQLNNFGNAYTKGNSVNSIFDLLNK-CKTAAGSRLLSQWL 356
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEK---RRAG--- 390
KQPL + N+I R +V+ +D+T R L Q L+++ D++RL+ + + +G
Sbjct: 357 KQPLTNANDIQERHRLVELIIDNTDTRVFLIQDWLRQVPDVKRLLKKITNGVSKSSGNEN 416
Query: 391 --LQQIVKLYQSSIRLPYIRSALQQ-----YEGQFSSLIKERYLDPLESLTDDDHLNKFI 443
L+ +V+LYQ + LP + L++ + Q +++ + P+ + L KF
Sbjct: 417 KKLEDVVRLYQLILILPNLIEKLKETVDSNIDDQTRHNVEKHWFKPITERYES--LLKFQ 474
Query: 444 ALVETSVDLDQLE--------NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
LVET++DL L+ N ++ I S +D L+ + + + ++I + + DL
Sbjct: 475 ELVETTIDLSPLDSSNASDLLNADFNIKSEFDDSLTETNSNIQDISQKIKDCQYEVSEDL 534
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
++ V+K LKL+K Q G FR+T+ + +R ++I L+T K GV FT +L+ L
Sbjct: 535 EMEVEKKLKLEKHQQHGWCFRVTRNDSSVLRNT-GNKYIELQTVKAGVYFTTKELRSLAQ 593
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
+YQ++ ++Y + Q+EL+ ++ +T+ +F +LA L+ LDV+ SFA++A P PY +
Sbjct: 594 KYQELSDDYNSKQRELIREILSITLTYHSVFINLALSLAHLDVITSFANVAIFAPIPYAK 653
Query: 616 PDINP--PDVGD-------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKS------WFQI 660
P I+P DV + L+ +RHP +EAQD ++FI ND L S F I
Sbjct: 654 PIIHPLSSDVDSDEYRERRLRLKEARHPVLEAQDDISFISNDVNLSNNPSEAEEAKAFVI 713
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS----ISVRDCIFARVGAGDCQLRGV 716
ITGPNMGGKST+IRQ+G LM Q+GSF+P A + + D I +RVGAGD Q++G+
Sbjct: 714 ITGPNMGGKSTYIRQIGAIALMNQIGSFIPASDAEFTPEVPIFDAILSRVGAGDSQMKGL 773
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLET+SIL A+ SLIIIDELGRGTSTYDGFGLAW+I EHL+ E R LFAT
Sbjct: 774 STFMIEMLETSSILATASHNSLIIIDELGRGTSTYDGFGLAWSISEHLITEKRCFALFAT 833
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK----LTMLYKVEPGACDQSFG 832
HFHELT L+ TK V N HV+AH+++ ++ +T++YKVEPG D+SFG
Sbjct: 834 HFHELTDLS--------TKYNDRVENLHVAAHVENEEKEGNNDITLMYKVEPGISDKSFG 885
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAAR 892
IHVAE FPE +V +A+ KA+EL+ S D V SK+ + SD +++ G
Sbjct: 886 IHVAELVKFPEKIVNVAKRKASELQSSN-----SKDIDPYVQSKKTKCSD-SEVQNGLEN 939
Query: 893 AHQFLKEFSDM 903
+ LKE+ +
Sbjct: 940 LRKVLKEWKSL 950
>gi|91093785|ref|XP_967374.1| PREDICTED: similar to mismatch repair protein [Tribolium castaneum]
gi|270015917|gb|EFA12365.1| hypothetical protein TcasGA2_TC002071 [Tribolium castaneum]
Length = 913
Score = 534 bits (1375), Expect = e-148, Method: Compositional matrix adjust.
Identities = 335/925 (36%), Positives = 512/925 (55%), Gaps = 53/925 (5%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L LD KQ R F+ F+ LP + +RFF D+YT H +A+ A T+ T ++ +G
Sbjct: 10 LNLDFKQQRLFVDFFNNLPQKPSSTLRFFSHGDFYTLHSSDAS-SASTF--TGNIVKYMG 66
Query: 70 TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN----WRLVKSGTPGNLGSY 125
LS V + K+ FE R+LLL R + +E+Y S N W L G+PGNL +
Sbjct: 67 EDPQ-LSYVVLRKSQFEQYVRELLLVR-QYRVEVYVKSTPNKINDWTLKYKGSPGNLSQF 124
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESAL 185
EDVLF N + + ++ L G I V+ T+ + EF D+ FT +E+ +
Sbjct: 125 EDVLFENASITFSNDVLGLKVT---KGRIIAAASVNSTELKFQVCEFSDNECFTELEALI 181
Query: 186 VALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVE 245
+G +EC++P ++ + L+ L R V++ KK++F ++VQDL+RL+ +
Sbjct: 182 AQVGPRECVIPQG--EAPDLIELKKVLERNSVLVARAKKSDFGAENIVQDLNRLLYFAEG 239
Query: 246 PVRDLVSGFEI----APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRAL 301
R +S E A L A++ + L DE N+ + I + Y+RLD+AA+ +L
Sbjct: 240 HQRSCLSFPETHNSEALTCLNAVIKFLNLTGDEQNFNQFRISSLDVHRYVRLDNAALYSL 299
Query: 302 NVL--------ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
N+L ES +KNFSL G+++ C G+RLL W+KQPL D+N I R +I
Sbjct: 300 NILPKPGVNTLESTNQTSKNFSLKGILDH-CVTPQGRRLLETWIKQPLKDLNLIQERHEI 358
Query: 354 VQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRR-AGLQQIVKLYQSSIRLPYIRSALQ 412
V+ FV + LRQDL+ + L+ + A LQ K+YQ +P + L+
Sbjct: 359 VETFVKNPQLRQDLQTEVLARLPDLLLLSKKLSSQKATLQDCYKVYQVVAAVPLLLKNLK 418
Query: 413 QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
Q + + ++ + P+E L +D L+K+ ++E +DL+ ++ GE+++ SS+ L
Sbjct: 419 QVD---NPSLQSALIHPIEELRND--LDKYQDMIEELLDLELVDRGEFLVKSSFSPALEE 473
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
+ + +E ++ L + A+DL +K +KLD Q + FR+T KEEP +R ++
Sbjct: 474 ISARKLQIEERMQKLLRAAANDLGFEEEKTIKLDYTDQHRYFFRVTLKEEPVLRS--NSR 531
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
+ +L+ K GV+FTN+KL +L D Y + EY QK +++ + A + + ++L
Sbjct: 532 YQILDVVKGGVRFTNSKLAELNDDYAEAKAEYVEQQKTIISEMFAVAAGYGDCLRNLNMF 591
Query: 593 LSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLI 652
++ +DVL++FA++A PY RP + + L RHPC+E Q+ V+FIPN +
Sbjct: 592 IATVDVLVAFANVAVWARVPYIRPKMFEAGQSPLKLFKVRHPCIEQQEHVSFIPNSVEF- 650
Query: 653 RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
+ IITGPNM GKST+IR +GV +LMAQ+GSFVPC+ A I + D I ARVGA DC
Sbjct: 651 DSEHTLHIITGPNMCGKSTYIRSIGVCVLMAQIGSFVPCNYAEIPIVDAILARVGAEDCL 710
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
L+G+STFM EM+ETA+I+K AT SL+IIDELGRGTSTYDG GLA+AI E L +EI+ +
Sbjct: 711 LKGLSTFMVEMIETATIIKSATPNSLVIIDELGRGTSTYDGCGLAFAIAEFLAKEIKCFS 770
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFG 832
LFATHFHE+T LA + + V N HV+A +T +T LY++ G CD S+G
Sbjct: 771 LFATHFHEITRLAEMHPS---------VCNKHVTAV--TTDNTITPLYQIRDGECDNSYG 819
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAAR 892
IH A F + V+ A E +LE + D E +R+ +S+ + + +
Sbjct: 820 IHCARMVEFSDDVIQSAVEHQKKLEHTAGMQFLRD---FEPVLRRQVVSEGDKIIQDTLE 876
Query: 893 AHQFLKEFSDMPL--ETMDLKEALE 915
+ L + SD L E LKE LE
Sbjct: 877 KVKGLDKLSDEDLVKEIAKLKEELE 901
>gi|260945917|ref|XP_002617256.1| hypothetical protein CLUG_02700 [Clavispora lusitaniae ATCC 42720]
gi|238849110|gb|EEQ38574.1| hypothetical protein CLUG_02700 [Clavispora lusitaniae ATCC 42720]
Length = 989
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 345/962 (35%), Positives = 531/962 (55%), Gaps = 99/962 (10%)
Query: 9 PELKL-DAKQARGFLSFYKTLP--NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAL 65
P+LK DA R F + LP + VR D ++Y++A GE+A IA++ Y T + L
Sbjct: 6 PDLKFSDAVDERSFYRKFTQLPAKESAQVVRLVDHKEYFSAFGEDAEMIAESIYKTQSVL 65
Query: 66 RQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSY 125
++ + V++S +F ++ R L+E + + +E+Y +L+ + TPGNL
Sbjct: 66 KK----ASGTVYVTISPQVFASVVRHCLVENS-YKVEVY---NKPLQLLVTATPGNLEGL 117
Query: 126 EDVLFANNEMQ----DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
+ + E TP++ A+ + + +G+ VDL+ + L ++EF D+ F+N+
Sbjct: 118 AEEYGVDLEAMLRDGSTPMVAAVKFSASGSAKKVGVCLVDLSNKALYVSEFDDNDLFSNL 177
Query: 182 ESALVALGCKECLLPTEA------VKSSECKTLRDALTRCG-VMLTERKKTEFKTRDLVQ 234
ES L+ + KE +LP+ S + L L + G +++ K + F +L Q
Sbjct: 178 ESLLLQVNVKEVVLPSTYNPDPTDASSGDVIKLFQVLNKIGSIVVGSVKSSLFSAANLDQ 237
Query: 235 DLDRLVRGS---VEPVRDL-----VSGFEIAPGALG-----ALLSYAELLSDESNYGNYY 281
DL +++ E ++ G + A +L AL+ Y LLSD+ + ++
Sbjct: 238 DLGKIITAQNIDTEAANNIELILASKGIDSAEHSLSFACCNALVQYLGLLSDDDS-PSFS 296
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESK-----TDANKNFSLFGLMNRTCTAGMGKRLLHMW 336
I KY+L S+M+LDS+ +RALN+ + ++++ S+F L+N+ C G RLL W
Sbjct: 297 IDKYNLASFMKLDSSTLRALNIFPQQQAGGLSNSSAVSSIFDLLNK-CKTAAGTRLLSQW 355
Query: 337 LKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLE---KRRAG-- 390
LKQPL D I R +V ++DT LR + Q L ++ D++RL+ + K+ A
Sbjct: 356 LKQPLTDAEAIENRHSLVGHMINDTNLRVFVSQEWLPQVPDVKRLLKKMATGLKKPAASE 415
Query: 391 ---LQQIVKLYQSSIRLPYIRSALQQ-----YEGQFSSLIKERYLDPLESLTDDDHLNKF 442
L+++V+LYQ LP + + LQ + L KE +L+P+ + L KF
Sbjct: 416 NKKLEEVVRLYQLITSLPNLLNMLQMSIDDCTDESVKKLCKESWLEPISK--NHQALLKF 473
Query: 443 IALVETSVDLDQLE--------NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
LVET++DL L+ N E+ I +D L A+ + ++ ++I H++ D
Sbjct: 474 QELVETTIDLSPLDSSSAHDLLNAEFNIKPEFDESLIAINDNLQATSKKIKQTHEEVGED 533
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLG 554
L++ +K LKL+K Q G FR+T+ + +R ++I L+T K GV FT +L+ L
Sbjct: 534 LNIDTEKKLKLEKHQQHGWCFRVTRIDSAILRNT-GDKYIELQTVKAGVFFTTKRLRTLS 592
Query: 555 DQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYT 614
QY EY Q+EL+ ++ +T+ +F L+ +LS +DVL +FA++A PT +
Sbjct: 593 QQYLDYFAEYNAKQRELIKEILSITLTYQTVFLRLSLVLSNIDVLSAFANVAIFAPTSFV 652
Query: 615 RP-------DINPPDVGD--IILEGSRHPCVEAQDWVNFIPNDCKLIR-GKSWFQIITGP 664
+P ++ P+ + L +RHP +E QD VNFI ND +L G S F IITGP
Sbjct: 653 KPKLHGLASSVDSPEFAQRRVKLSDARHPVLEVQDDVNFIANDVELANTGGSSFAIITGP 712
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS---VRDCIFARVGAGDCQLRGVSTFMQ 721
NMGGKST+IRQVGV LM+QVGS++P ++ + D I +RVGAGD QL+G+STFM
Sbjct: 713 NMGGKSTYIRQVGVIALMSQVGSYIPASDENVPELPIFDAILSRVGAGDSQLKGLSTFMI 772
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EMLET+SIL AT SLIIIDELGRGTSTYDGFGLAWAI EHL+ + + TLFATHFHEL
Sbjct: 773 EMLETSSILATATINSLIIIDELGRGTSTYDGFGLAWAISEHLITQKQCFTLFATHFHEL 832
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHI---DSTSRK---LTMLYKVEPGACDQSFGIHV 835
T L+ ++ + V N HV AHI DS + K +T++Y+VEPG D+SFGIHV
Sbjct: 833 TKLSEKHEGK--------VQNLHVVAHIEKNDSEAEKEDDITLMYRVEPGISDKSFGIHV 884
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
AE FP +V +A+ KA+EL+ + D V SKR + ++ ++S G +
Sbjct: 885 AELVKFPTKIVNMAKRKASELQHIN----VGGDTDPYVNSKRTKCTN-EEISVGVEKLKD 939
Query: 896 FL 897
L
Sbjct: 940 LL 941
>gi|150866717|ref|XP_001386399.2| hypothetical protein PICST_68406 [Scheffersomyces stipitis CBS
6054]
gi|149387973|gb|ABN68370.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 999
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 348/975 (35%), Positives = 531/975 (54%), Gaps = 108/975 (11%)
Query: 9 PELKL-DAKQARGFLSFYKTLPN-DTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTA 64
P+L+ D R F Y L D +RF D +DY+TA E+A +A+ Y T +
Sbjct: 6 PDLRFTDTVDERSFYRKYAGLSTKDASTIRFIDHNNKDYFTALDEDADLVAENIYKTQSV 65
Query: 65 LRQLGTGSDALSSVSVSKNMF-ETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLG 123
L+ S+ V++S +F + + +++R +E+Y ++L+ + TPGNL
Sbjct: 66 LKY--NNSNKNRYVTISPQVFLNNVLKFCIIDR-HMKVEIYHNK--TFQLLSTATPGNLE 120
Query: 124 SYEDVLFANNE--MQD--TPVIVALFPNFRENGCT--IGLGYVDLTKRVLGLAEFLDDSH 177
+ + N E QD TP++ ++ F++ G +G+ +D + + ++EF D+
Sbjct: 121 ALANEYGVNLEGMFQDCSTPMVASI--KFQQTGSARKVGVCVIDTSNSTIQVSEFEDNDL 178
Query: 178 FTNVESALVALGCKECLLPTEAV---KSSECKTLRDALTRCGVMLTERKKTEF-KTRDLV 233
F+N+ES L+ LG KE +LP+ +++E L L + G ++ K+ F T+D+
Sbjct: 179 FSNLESLLLQLGVKEVVLPSNYSAKDENTESIKLFQVLDKIGYLVVSSVKSSFFTTKDIE 238
Query: 234 QDLDRLVRGSVEPVRDL-------------VSGFEIAPGALGALLSYAELLSDESNYGNY 280
QDL +LV + D + F + AL++Y +LLSD+ ++
Sbjct: 239 QDLRKLVSSENQKDDDDVNVDLLLASKGINTADFAHSLACCNALIAYLQLLSDDVQ-NSF 297
Query: 281 YIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--------SLFGLMNRTCTAGMGKRL 332
I +Y+L SYM+LDS+ M+ALN+ S N S+F L+N+ C G RL
Sbjct: 298 TIEQYNLSSYMKLDSSTMKALNIFPSSNSGVSNALVKSSNISSIFELLNK-CRTAAGSRL 356
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEK----- 386
L WLKQPL ++ I RLD+V VD T R Q L ++ DI RL+ +
Sbjct: 357 LSQWLKQPLTSLSMIEERLDLVNYLVDGTNFRVYANQEFLSQVPDIRRLLKKISNGLSKS 416
Query: 387 ---RRAGLQQIVKLYQSSIRLP--------YIRSALQQYEGQFSSLIKERYLDPLESLTD 435
L+ IV LYQ + LP I ++ ++LIK+ +L+P+E +
Sbjct: 417 TGNENKKLEDIVVLYQLVLALPAFIDMSKMVIADIEEKDSLPVANLIKKHWLEPVEKSLE 476
Query: 436 DDHLNKFIALVETSVDLDQLE--------NGEYMISSSYDTGLSALKNEQESLERQIHSL 487
L+KF ++ET++DL LE + ++ + +D L + ++ ++ +I L
Sbjct: 477 S--LSKFQEMIETTIDLSPLESSSAYDQLHSDFNVRPEFDESLIEINDKLQASLAEIKQL 534
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
H + A DL++ +DK LKL+K Q G FR+T+ + +R ++ L+T K GV FT
Sbjct: 535 HIEVADDLNMELDKKLKLEKHIQHGWCFRVTRNDSTVLRNT-GNKYSQLQTVKAGVFFTT 593
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+L L +Y + L+EY Q+EL+ ++ ++++ +F +L+ L+ LDVL+SFA++A
Sbjct: 594 KRLTLLSQEYAEALQEYNTKQRELIKEILSISLSYQSVFMNLSLTLAHLDVLVSFANVAI 653
Query: 608 SCPTPYTRPDINP--PDVGD-------IILEGSRHPCVEAQDWVNFIPNDCKLI-----R 653
PT + RP ++P D+ I L +RHP +E QD +NFI ND L +
Sbjct: 654 VAPTVFARPKLHPLSNDIDSDQFKNRKIKLREARHPVLEVQDDINFIANDVFLSNDACDK 713
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC---DRASISVRDCIFARVGAGD 710
GK F IITGPNMGGKST+IRQ+GV LMAQ+GSF+P D + + D I +RVGAGD
Sbjct: 714 GKP-FVIITGPNMGGKSTYIRQIGVIALMAQIGSFIPANEDDFPELPIFDAILSRVGAGD 772
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QL+G+STFM EMLET+SIL AT SLIIIDELGRGTSTYDGFGLAW+I EHL++E
Sbjct: 773 SQLKGLSTFMIEMLETSSILATATQNSLIIIDELGRGTSTYDGFGLAWSISEHLIKEKSC 832
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI---DSTSRKLTMLYKVEPGAC 827
TLFATHFHELT L+ + ++ V N HV AH+ D +T++Y+VEPG
Sbjct: 833 FTLFATHFHELTQLSSKYEDK--------VDNLHVVAHVENKDENDDDITLMYRVEPGVS 884
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMS 887
D+SFGIHVAE FP ++ +A+ KA+EL+D V +D I+ +K ++
Sbjct: 885 DKSFGIHVAELVKFPSKIINMAKRKASELQDMN---VTEEDKFIQ---NKKTKCSAEEID 938
Query: 888 RGAARAHQFLKEFSD 902
RG LK++ D
Sbjct: 939 RGVDTLKTILKKWKD 953
>gi|190346184|gb|EDK38208.2| hypothetical protein PGUG_02306 [Meyerozyma guilliermondii ATCC
6260]
Length = 921
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 344/887 (38%), Positives = 504/887 (56%), Gaps = 79/887 (8%)
Query: 9 PELKL-DAKQARGFL-SFYKTLPNDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTA 64
P+L+ DA R + F + P D +R D RDY+T E+A IA Y T +
Sbjct: 6 PDLRFSDAGDERSYYRKFAQLPPKDASTIRVMDHNNRDYFTVLDEDADMIADNIYKTRSV 65
Query: 65 LRQLGTGSDALSSVSVSKNMF-ETIARDLLLERTDH-TLELYEGSGSNWRLVKSGTPGNL 122
++ S+A V++S +F T+ R L+E +H +E+Y + LV TPGNL
Sbjct: 66 IK----ASNAHRYVTISPQVFYNTVLRFCLIE--NHLKVEVYHSK--TFELVTMATPGNL 117
Query: 123 GSYEDVLFANNEMQD--TPVIVAL-FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
S + N E D +P++ A+ F ++ IG+G VDL+ + L EF D+ F+
Sbjct: 118 ESIANEYGINLESADFSSPMVAAVKFTPAKK----IGVGLVDLSNSSIQLCEFEDNDLFS 173
Query: 180 NVESALVALGCKECLLPTE---AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
N+E+ L+ LG KE ++P+ ++ + L L R G ++ K+ +++ DL
Sbjct: 174 NLETLLLQLGVKEIIVPSNYDPHEETGDAVKLFQVLDRIGNIVVTSVKSSLFNKEVEHDL 233
Query: 237 DRLVRG-SVEPVRDLVS------GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDS 289
R+V G ++E V L S F ++ ALL Y EL S G + I KY+L
Sbjct: 234 ARIVEGENIELV--LASKGINAIDFPLSLACCSALLHYLELSS-----GEFSIDKYNLSD 286
Query: 290 YMRLDSAAMRALNVLESKTDANKN--FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
YM+LD++ +ALN+ + + K S+F L+N+ C + G RLL WLKQPL V++I
Sbjct: 287 YMKLDTSTTKALNIFPASNNYTKPNVSSIFDLLNK-CKSSAGSRLLSQWLKQPLTSVSDI 345
Query: 348 NARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLE---KRRAG-----LQQIVKLY 398
R ++V+ V+DT+LR L Q L R+ D++RL+ + K+ +G L +V+LY
Sbjct: 346 TDRHELVELLVNDTSLRVFLTQDWLPRVPDVKRLLKKIANGVKKSSGNENKKLDDVVRLY 405
Query: 399 QSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE-- 456
Q I +P + S L + LI + + +P++ L KF LVET++DL L+
Sbjct: 406 QLVIVVPELLSMLND-----NPLILKYWTEPIQKA--HKSLIKFQELVETTIDLSPLDSS 458
Query: 457 ---NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGH 513
+ ++ I +D L + N+ E+ I + DL+L VDK LKL+K G
Sbjct: 459 DLLHNDFNIKPEFDESLVKINNQLEATLSDIKQCQVDASDDLNLEVDKKLKLEKHQNHGW 518
Query: 514 VFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVN 573
FR+T+ + +R +++ +T K G F+ +L+ L QYQK +EY + Q+EL+
Sbjct: 519 CFRVTRNDSNVLRN--NSKYQQFQTVKAGTYFSTKELRTLALQYQKYSDEYNSKQRELIR 576
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI---NPPDVGDIILEG 630
++ ++T+S +F A L+ +DV++SFA+ + PTPY RP I N + + L+
Sbjct: 577 EILSISLTYSSVFMPFALTLAHIDVIVSFANSSVFAPTPYVRPIIHGLNDKESRTLKLKD 636
Query: 631 SRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
+RHP +E QD +NFI ND + GK F IITGPNMGGKST+IRQVGV LM Q+G FVP
Sbjct: 637 ARHPVLEVQDDINFIANDVAMSPGKQ-FSIITGPNMGGKSTYIRQVGVIALMNQIGCFVP 695
Query: 691 C-DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
+ A + V D I +RVGAGD QL+G+STFM EMLET+SIL A+ SLIIIDELGRGTS
Sbjct: 696 AREGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATASANSLIIIDELGRGTS 755
Query: 750 TYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI 809
TYDGFGLAWAI EH+++E TLFATHFHELT LA + V N HV AH+
Sbjct: 756 TYDGFGLAWAISEHIIKEKECFTLFATHFHELTQLA---------DKYPSVQNLHVVAHV 806
Query: 810 DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + +T++Y+VEPG D+SFGIHVAE FP +V +A+ KA EL
Sbjct: 807 EQ-ADDITLMYRVEPGVSDKSFGIHVAELVKFPAKIVNMAKRKADEL 852
>gi|448116378|ref|XP_004203022.1| Piso0_000618 [Millerozyma farinosa CBS 7064]
gi|359383890|emb|CCE78594.1| Piso0_000618 [Millerozyma farinosa CBS 7064]
Length = 995
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 349/979 (35%), Positives = 534/979 (54%), Gaps = 114/979 (11%)
Query: 7 KLPELK-LDAKQARGFLSFYKTLP-NDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTT 62
K P+LK +D + R + Y++L + +R D +DY+T E+A IA Y T
Sbjct: 4 KRPDLKFVDNGEERSYYRKYESLSEKEPSVIRIIDHNNKDYFTVLDEDADLIADNIYKTQ 63
Query: 63 TALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNL 122
+ ++ + S V++S + L + +E+Y+ + ++ S TPGNL
Sbjct: 64 SIIKY--SQSKKHRYVTISPQVLLNNVLKFCLVDNSYKVEIYQNK--TFDMIVSATPGNL 119
Query: 123 GSYEDVLFANNEMQ----DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHF 178
S N E +PVI A+ + +G+ +DL+ ++ L EF D+ F
Sbjct: 120 ESLSSEYGVNLEGMFSDCSSPVIAAVKYIQQSGQKKVGVCMIDLSNNLMQLCEFEDNELF 179
Query: 179 TNVESALVALGCKECLLPTEAVKS---SECKTLRDALTRCG-VMLTERKKTEFKTRDLVQ 234
+N+ES ++ G KE +LP+ S S+ L L + G ++L+ K + F ++D+ Q
Sbjct: 180 SNLESLILQTGIKEIVLPSNYEPSETGSDNIKLFQVLNKIGNLVLSTAKSSLFTSKDIEQ 239
Query: 235 DLDRLVRGSVE--PVRDLVSG-------FEIAPGALGALLSYAELLSDESNYGNYYIRKY 285
DL + + S E V +++ F + ALL+Y +L S +S ++ + KY
Sbjct: 240 DLSKFIATSNELNNVEAVLASKGINSVEFSTSLSCCNALLNYLDLFSSDS--ASFTVEKY 297
Query: 286 SLDSYMRLDSAAMRALNVLESK--------TDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
+L +YM+LDS+AM+ALN+ S+ T N S+F L+N+ C G RLL WL
Sbjct: 298 TLSAYMKLDSSAMKALNIFSSQLNNFGNAYTKGNSVNSIFDLLNK-CKTAAGSRLLSQWL 356
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEK---RRAG--- 390
KQPL + N+I R +V+ +D+T +R L Q L+++ D++RL+ + + +G
Sbjct: 357 KQPLTNANDIQERHRLVELIIDNTDIRVFLIQDWLRQVPDVKRLLKKITNGVNKSSGNEN 416
Query: 391 --LQQIVKLYQSSIRLPYIRSAL-------------QQYEGQFSSLIKERYLDPLESLTD 435
L+ +V+LYQ + LP + + Q E + I ERY
Sbjct: 417 KKLEDVVRLYQLVLVLPNLIEKVKETMDSNIDEDTRQNVEKHWFKPISERY--------- 467
Query: 436 DDHLNKFIALVETSVDLDQLE--------NGEYMISSSYDTGLSALKNEQESLERQIHSL 487
+ L KF LVET++DL L+ N ++ I S +D L+ + + + + I
Sbjct: 468 -EALLKFQELVETTIDLSPLDSSNTSDLLNADFNIKSEFDDSLTETNSNIQDISQTIKDC 526
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
+ + DL + V+K LKL+K Q G FR+T+ + +R ++I L+T K GV FT
Sbjct: 527 QYEVSEDLGMEVEKKLKLEKHQQHGWCFRVTRNDSSVLRNT-GNKYIELQTVKAGVYFTT 585
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
L+ L +YQ + ++Y + Q+EL+ ++ +T+ +F +LA L+ LDV+ SFA++A
Sbjct: 586 KDLRSLAQKYQVLSDDYNSKQRELIREILSITLTYHSVFINLALSLAHLDVITSFANVAI 645
Query: 608 SCPTPYTRPDINP--PDVGD-------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKS-- 656
P PY +P I+P DV + L+ +RHP +EAQD ++FI ND L S
Sbjct: 646 FAPIPYAKPVIHPLSSDVDSDEYRERRLKLKEARHPVLEAQDDISFISNDVNLANNSSEA 705
Query: 657 ----WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA----SISVRDCIFARVGA 708
F IITGPNMGGKST+IRQ+GV LM Q+GSFVP A + V D I +RVGA
Sbjct: 706 ENGKAFVIITGPNMGGKSTYIRQIGVIALMNQIGSFVPASDADFTPEVPVFDAILSRVGA 765
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
GD Q++G+STFM EMLET+SIL A+ SLIIIDELGRGTSTYDGFGLAW+I EHL+ E
Sbjct: 766 GDSQMKGLSTFMIEMLETSSILATASHNSLIIIDELGRGTSTYDGFGLAWSISEHLITEK 825
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK----LTMLYKVEP 824
R TLFATHFHELT L+ ++N + V N HV+AH+++ ++ +T++YKVEP
Sbjct: 826 RCFTLFATHFHELTDLSA----KYNDR----VENLHVAAHVENEDKEGNNDITLMYKVEP 877
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPN 884
G D+SFGIHVAE FPE +V +A+ KA+EL+ + S D V SK+ + SD +
Sbjct: 878 GISDKSFGIHVAELVKFPEKIVNVAKRKASELQ-----STNSKDIDPYVQSKKTKCSD-D 931
Query: 885 DMSRGAARAHQFLKEFSDM 903
++ G + LKE+ +
Sbjct: 932 EVQIGLENLRKILKEWKSL 950
>gi|379995940|gb|AFD23453.1| mismatch repair protein, partial [Solanum cheesmaniae]
gi|379995944|gb|AFD23455.1| mismatch repair protein, partial [Solanum lycopersicum var.
cerasiforme]
gi|379995948|gb|AFD23457.1| mismatch repair protein, partial [Solanum lycopersicum]
Length = 317
Score = 530 bits (1366), Expect = e-147, Method: Compositional matrix adjust.
Identities = 251/317 (79%), Positives = 290/317 (91%)
Query: 175 DSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQ 234
DSHFTN+ESALVALGC+ECL+PTE KSSE + L DA++RCGVM+TERKKTEFK RDLVQ
Sbjct: 1 DSHFTNLESALVALGCRECLVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQ 60
Query: 235 DLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
DL RLV+GSVEPVRDLVS FE A GALG +LSYAELL+D+SNYGNY +++Y+LDSYMRLD
Sbjct: 61 DLGRLVKGSVEPVRDLVSSFECAAGALGCILSYAELLADDSNYGNYTVKQYNLDSYMRLD 120
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
SAAMRALNV+ESK+DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV+EIN RLD+V
Sbjct: 121 SAAMRALNVMESKSDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLV 180
Query: 355 QAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
QAFV+D ALRQDLRQHLKRISDIERL HNLE++RA L +VKLYQS IR+PYI+S L++Y
Sbjct: 181 QAFVEDAALRQDLRQHLKRISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERY 240
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+GQF+ LI+ERY+D LE +DD+HLNKFIALVET+VDLDQLENGEYMI S+YD LSALK
Sbjct: 241 DGQFAPLIRERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEYMIFSAYDPNLSALK 300
Query: 475 NEQESLERQIHSLHKQT 491
+EQE+LE+QIH+LHKQT
Sbjct: 301 DEQETLEQQIHNLHKQT 317
>gi|367461156|gb|AEX14534.1| mismatch repair protein [Solanum habrochaites]
Length = 317
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 251/317 (79%), Positives = 289/317 (91%)
Query: 175 DSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQ 234
DSHFTN+ESALVALGC+EC++PTE KSSE + L DA++RCGVM+TERKKTEFK RDLVQ
Sbjct: 1 DSHFTNLESALVALGCRECVVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKDRDLVQ 60
Query: 235 DLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
DL RLV+GSVEPVRDLVS FE A GALG +LSYAELL+DESNYGNY +++Y+L+SYMRLD
Sbjct: 61 DLGRLVKGSVEPVRDLVSSFECAAGALGCILSYAELLADESNYGNYTVKQYNLNSYMRLD 120
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
SAAMRALNV+ESK+DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV+EIN RLD+V
Sbjct: 121 SAAMRALNVMESKSDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLV 180
Query: 355 QAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
QAFV+D ALRQDLRQHLKRISDIERL HNLE++RA L +VKLYQS IR+PYI+S L++Y
Sbjct: 181 QAFVEDAALRQDLRQHLKRISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERY 240
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+GQF LIKERY+D LE +DD+HLNKFIALVET+VDLDQLENGEYMI S+YD LSALK
Sbjct: 241 DGQFVPLIKERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEYMIFSAYDPNLSALK 300
Query: 475 NEQESLERQIHSLHKQT 491
+EQE+LE+QIH+LHKQT
Sbjct: 301 DEQETLEQQIHNLHKQT 317
>gi|340730331|gb|AEK64794.1| Msh2 [Schmidtea mediterranea]
Length = 884
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 305/858 (35%), Positives = 494/858 (57%), Gaps = 42/858 (4%)
Query: 20 GFLSFYKTL---PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALS 76
F F+ +L PN T +RFFDR+DYYT H E+A +A++YY + L+ S +
Sbjct: 7 SFSLFWNSLGDKPNST--IRFFDRQDYYTVHFEDAEMLARSYYKSMEILKYFRRDSVSSP 64
Query: 77 SVSVSKNMFETIARDLLLERTDHTLELYEGSGSN--WRLVKSGTPGNLGSYEDVLFANNE 134
+++SK+ + + + LL+ + +E+Y + S+ W L TPGNL Y+D+LF + E
Sbjct: 65 YINISKSNSDGVFKYLLIA-NQYKVEVYSNNKSHDSWDLDFVATPGNLEKYQDILFKDVE 123
Query: 135 MQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDD----SHFTNVESALVALGC 190
+ + ++ L + I LG+ DL + + F + N+ SAL L C
Sbjct: 124 LVSSNSLLGLNIKRINDDYRIFLGFCDLDNGIFMIGGFEESFTGYEQLANLSSALFQLNC 183
Query: 191 KECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV----RGSVEP 246
+ECL+P + E +++A+ G+++TE KK+ F + +++ + +L+ +
Sbjct: 184 RECLIPNDT--RPELLAVKNAVQSAGLLVTEVKKSFFSSENVMNSILKLICKTKLNNENT 241
Query: 247 VRDLV--SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL 304
V LV G E G LG++++Y +L +DES + + ++ + LD+YMR+ RALN+L
Sbjct: 242 VLKLVDTEGAE-TIGCLGSVITYLDLANDESFFNFFDVQTFKLDNYMRVGEQCSRALNIL 300
Query: 305 ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALR 364
S D K+ SL+GL+N C G+RLL W+KQPL+DVN IN RLDIV++ ++D LR
Sbjct: 301 PSPNDLRKHDSLYGLLN-CCRTASGERLLLQWIKQPLMDVNLINNRLDIVESLINDNKLR 359
Query: 365 QDL-RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
L ++L+RI D++R+ L++ + LQ I KLY + + + + L ++ G + +I+
Sbjct: 360 GCLYEENLRRIPDLQRITRRLQRNKGNLQDIYKLYVALRQASDMLNLLNEHNGPYKCIIQ 419
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
++ + D FI + + D + ++N E+ + D L +N +L+ Q
Sbjct: 420 SELSSVIQEILKDTE--NFIQMFTSFFDFEAVKNHEFKVKCDVDESLKECENSMITLKSQ 477
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI-VLETRKDG 542
+ + + + L + K LK + G+ R+++K+E +R K FI ++ET KDG
Sbjct: 478 METESSRVSDKLGIESTKQLKFESSNSLGYYMRVSRKDENVLRNK---SFISIIETLKDG 534
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
VKF +T++ + + Y + +Y+ ++ ++ +++ + L++++++LDVL S
Sbjct: 535 VKFHSTQMTLMNESYLQHRRDYEEYERSIIEEIMKITNKYVGSLHQLSSIIAKLDVLCSL 594
Query: 603 ADLASSCPTPYTRPDINPPDVGDII-LEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQII 661
A + P Y RP + + ++ RHP VE Q+ +++I ND ++ FQII
Sbjct: 595 ATMVCGAPGTYARPKVVDDCKTRVFKVKNCRHPLVEMQNNMSYIANDISFDESRT-FQII 653
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKST+IR +G+ +MAQ+GSFVPCD A IS+ D I R+GAGDCQL GVSTFM
Sbjct: 654 TGPNMGGKSTYIRSIGLISVMAQIGSFVPCDGAEISIFDRIMTRIGAGDCQLTGVSTFMA 713
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EML+ + ILK AT +SLIIIDELGRGTST+DGFGLAW+I EH+ E++A + FATHFHEL
Sbjct: 714 EMLDISWILKTATSKSLIIIDELGRGTSTFDGFGLAWSISEHIATELKAFSAFATHFHEL 773
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T L+ + N V N HV+A + +L +YKVE G +S+GI VA+ +
Sbjct: 774 TDLSKIHCN---------VNNLHVTAQ--TIGNELIFMYKVEEGPAVRSYGIEVAKASGL 822
Query: 842 PESVVTLAREKAAELEDF 859
P+ + LA+ K +E E+
Sbjct: 823 PDESIKLAKLKLSEYENL 840
>gi|379995942|gb|AFD23454.1| mismatch repair protein, partial [Solanum chilense]
Length = 317
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/317 (78%), Positives = 290/317 (91%)
Query: 175 DSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQ 234
DSHFTN+ESALVALGC+ECL+PTE KSSE + L DA++RCGVM+TERKKTEFK RDLVQ
Sbjct: 1 DSHFTNLESALVALGCRECLVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQ 60
Query: 235 DLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
DL RLV+GSVEPVRDLVS FE A GALG +LSYAELL+D+SNYGNY +++Y+L+SYMRLD
Sbjct: 61 DLGRLVKGSVEPVRDLVSSFECAAGALGCILSYAELLADDSNYGNYTVKQYNLNSYMRLD 120
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
SAAMRALNV+ESK+DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV+EIN RLD+V
Sbjct: 121 SAAMRALNVMESKSDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLV 180
Query: 355 QAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
QAFV+D ALRQDLRQHLKRISDIERL HNLE++RA L +VKLYQS IR+PYI+S L++Y
Sbjct: 181 QAFVEDAALRQDLRQHLKRISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERY 240
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+GQF+ LI+ERY+D LE +DD+HLNKFIALVET+VDLDQLENGEYMI S+YD LSALK
Sbjct: 241 DGQFAPLIRERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEYMIFSAYDPNLSALK 300
Query: 475 NEQESLERQIHSLHKQT 491
+EQE+LE+QIH+LHKQT
Sbjct: 301 DEQETLEQQIHNLHKQT 317
>gi|379995946|gb|AFD23456.1| mismatch repair protein, partial [Solanum corneliomuelleri]
Length = 317
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 249/317 (78%), Positives = 289/317 (91%)
Query: 175 DSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQ 234
DSHFTN+ESALVALGC+ECL+PTE KSSE + L DA++RCGVM+TERKKTEFK RDLVQ
Sbjct: 1 DSHFTNLESALVALGCRECLVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQ 60
Query: 235 DLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
DL RLV+GSVEPVRDLVS FE A GALG +LSYAELL+D+SNYGNY +++Y+L+SYMRLD
Sbjct: 61 DLGRLVKGSVEPVRDLVSSFECAAGALGCILSYAELLADDSNYGNYTVKQYNLNSYMRLD 120
Query: 295 SAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
SAAMRALNV+ESK+DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV+EIN RLD+V
Sbjct: 121 SAAMRALNVMESKSDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLV 180
Query: 355 QAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
QAFV+D ALRQDLRQHLKRISDIERL HNLE++RA L +VKLYQS IR+PYI+S L++Y
Sbjct: 181 QAFVEDAALRQDLRQHLKRISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERY 240
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+GQF+ LI+ERY+D LE +DD+HLNKFIALVET+VDLDQLENGEYMI S+YD L ALK
Sbjct: 241 DGQFAPLIRERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEYMIFSAYDPNLFALK 300
Query: 475 NEQESLERQIHSLHKQT 491
+EQE+LE+QIH+LHKQT
Sbjct: 301 DEQETLEQQIHNLHKQT 317
>gi|167966182|gb|ACA13172.1| mismatch repair MutS-like protein [Vermamoeba vermiformis]
Length = 677
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/678 (42%), Positives = 423/678 (62%), Gaps = 14/678 (2%)
Query: 101 LELYE-GSGSNWRLVKSGTPGNLGSYEDVLFA-NNEMQDTPVIVALFPNFRENGCTIGLG 158
+E+Y G W L K G+PGN+ EDVLFA NNEMQ+T ++A+ + IG
Sbjct: 9 VEIYACGEDRKWCLKKKGSPGNMAELEDVLFAGNNEMQETNTLIAVKLAYDGGQRVIGAA 68
Query: 159 YVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVM 218
++D+ + +G+A+ LD+ TN+ES ++ +G KEC K +C+ ++ +C ++
Sbjct: 69 FIDVILKKIGVAQLLDNDQLTNLESLIMQVGAKECYSMPLDEKDLDCQKMKTVYEKCDLV 128
Query: 219 LTERKKTEFKTRDLVQDLDRLV-RGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNY 277
+TE K+ +F ++D+ QDL RL+ ++ + + A A+ LL+ L+ DE+N+
Sbjct: 129 VTEMKRNDFASQDIEQDLRRLLGEKRFNTIKMSLIDDKHAMSAVSCLLNGLALMGDETNF 188
Query: 278 GNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
G Y + ++ LD YMRLD+AA+ ALNVL + + N+ +L+GL+NR C MG R L WL
Sbjct: 189 GAYKMYRFDLDQYMRLDTAAIYALNVLPNPKEPNQGQNLYGLLNR-CKTPMGSRKLLQWL 247
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVK 396
KQPLLD+ IN R D+VQ F +D L ++LR + L+RI D+ERL +++ RA LQ V
Sbjct: 248 KQPLLDLEMINNRHDVVQIFYEDENLCKELRTKCLRRIPDLERLSKKVQRNRASLQDCVV 307
Query: 397 LYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE 456
+YQ RLP I L+ G LI E+++ PLE L+ + L+E ++DL+ ++
Sbjct: 308 IYQFIQRLPEISDTLKNSLGD-QKLINEKFIAPLER-----DLSGYENLIEETIDLEMVD 361
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
GEY+IS+S+D L + ++++ + + I + + P + K+D G +R
Sbjct: 362 EGEYVISASFDDELKEISDKKKKVVKNIKGREDEVKIQIGSP--SSFKIDNDKTHGWFYR 419
Query: 517 ITKKEEPKIR-KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
I++K+E I KK F +L+ +KF + ++K L ++Y ++ Y +LV +
Sbjct: 420 ISRKDEKSIGGKKNEKIFTILQPISKVLKFQDAEMKALSEKYTELSASYNKKSADLVREI 479
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ ++ +F+ +++ELDV SFAD+A + P Y RPD+ G+++L+ +RHP
Sbjct: 480 MLIVSSYLPVFEEAHELIAELDVYTSFADVAYTAPYSYIRPDMKELGTGNVVLKKARHPV 539
Query: 636 VEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
+E Q + FIPND L+RG+S FQIITGPNMGGKSTFIRQVGV +LMAQ+GSFVPCD A
Sbjct: 540 LEIQPDMTFIPNDTDLVRGESSFQIITGPNMGGKSTFIRQVGVIVLMAQIGSFVPCDSAE 599
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
IS+ D I ARVGAGD QLRGVSTFM EMLET++IL AT SLIIIDELGRGTSTYDGFG
Sbjct: 600 ISICDAILARVGAGDSQLRGVSTFMAEMLETSTILHTATPNSLIIIDELGRGTSTYDGFG 659
Query: 756 LAWAICEHLVEEIRAPTL 773
LAWAI E + +I A L
Sbjct: 660 LAWAISEFISTKINALCL 677
>gi|146417216|ref|XP_001484577.1| hypothetical protein PGUG_02306 [Meyerozyma guilliermondii ATCC
6260]
Length = 921
Score = 524 bits (1349), Expect = e-145, Method: Compositional matrix adjust.
Identities = 344/887 (38%), Positives = 502/887 (56%), Gaps = 79/887 (8%)
Query: 9 PELKL-DAKQARGFL-SFYKTLPNDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTA 64
P+L+ DA R + F + P D +R D RDY+T E+A IA Y T
Sbjct: 6 PDLRFSDAGDERLYYRKFAQLPPKDASTIRVMDHNNRDYFTVLDEDADMIADNIYKTRLV 65
Query: 65 LRQLGTGSDALSSVSVSKNMF-ETIARDLLLERTDH-TLELYEGSGSNWRLVKSGTPGNL 122
++ S+A V++S +F T+ R L+E +H +E+Y + LV TPGNL
Sbjct: 66 IK----ASNAHRYVTISPQVFYNTVLRFCLIE--NHLKVEVYHSK--TFELVTMATPGNL 117
Query: 123 GSYEDVLFANNEMQD--TPVIVAL-FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
S + N E D +P++ A+ F ++ IG+G VDL + L EF D+ F+
Sbjct: 118 ESIANEYGINLESADFLSPMVAAVKFTPAKK----IGVGLVDLLNSSIQLCEFEDNDLFS 173
Query: 180 NVESALVALGCKECLLPTE---AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
N+E+ L+ LG KE ++P+ ++ + L L R G ++ K+ +++ DL
Sbjct: 174 NLETLLLQLGVKEIIVPSNYDPHEETGDAVKLFQVLDRIGNIVVTSVKSSLFNKEVEHDL 233
Query: 237 DRLVRG-SVEPVRDLVS------GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDS 289
R+V G ++E V L S F ++ ALL Y EL S G + I KY+L
Sbjct: 234 ARIVEGENIELV--LASKGINAIDFPLSLACCSALLHYLELSS-----GEFSIDKYNLSD 286
Query: 290 YMRLDSAAMRALNVLESKTDANKN--FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
YM+LD++ +ALN+ + + K S+F L+N+ C + G RLL WLKQPL V++I
Sbjct: 287 YMKLDTSTTKALNIFPASNNYTKPNVSSIFDLLNK-CKSLAGSRLLSQWLKQPLTSVSDI 345
Query: 348 NARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLE---KRRAG-----LQQIVKLY 398
R ++V+ V+DT+LR L Q L R+ D++RL+ + K+ +G L +V+LY
Sbjct: 346 TDRHELVELLVNDTSLRVFLTQDWLPRVPDVKRLLKKIANGVKKSSGNENKKLDDVVRLY 405
Query: 399 QSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE-- 456
Q I +P + S L + LI + + +P++ L KF LVET++DL L+
Sbjct: 406 QLVIVVPELLSMLND-----NPLILKYWTEPIQKA--HKSLIKFQELVETTIDLSPLDSS 458
Query: 457 ---NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGH 513
+ ++ I +D L + N+ E+ I + DL+L VDK LKL+K G
Sbjct: 459 DLLHNDFNIKPEFDESLVKINNQLEATLSDIKQCQVDASDDLNLEVDKKLKLEKHQNHGW 518
Query: 514 VFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVN 573
FR+T+ + +R +++ +T K G F+ +L+ L QYQK +EY + Q+EL+
Sbjct: 519 CFRVTRNDSNVLRN--NSKYQQFQTVKAGTYFSTKELRTLALQYQKYSDEYNSKQRELIR 576
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI---NPPDVGDIILEG 630
++ ++T+ +F A L+ +DV++SFA+L+ PTPY RP I N + + L+
Sbjct: 577 EILSISLTYLLVFMPFALTLAHIDVIVSFANLSVFAPTPYVRPIIHGLNDKESRTLKLKD 636
Query: 631 SRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
+RHP +E QD +NFI ND + GK F IITGPNMGGKST+IRQVGV LM Q+G FVP
Sbjct: 637 ARHPVLEVQDDINFIANDVAMSPGKQ-FSIITGPNMGGKSTYIRQVGVIALMNQIGCFVP 695
Query: 691 C-DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
+ A + V D I +RVGAGD QL+G+STFM EMLET+SIL A+ SLIIIDELGRGTS
Sbjct: 696 AREGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATASANSLIIIDELGRGTS 755
Query: 750 TYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI 809
TYDGFGLAWAI EH+++E TLFATHFHELT LA + V N HV AH+
Sbjct: 756 TYDGFGLAWAILEHIIKEKECFTLFATHFHELTQLA---------DKYPLVQNLHVVAHV 806
Query: 810 DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + +T++Y+VEPG D+SFGIHVAE FP +V +A+ KA EL
Sbjct: 807 EQ-ADDITLMYRVEPGVSDKSFGIHVAELVKFPAKIVNMAKRKADEL 852
>gi|328713533|ref|XP_001949991.2| PREDICTED: DNA mismatch repair protein Msh2 [Acyrthosiphon pisum]
Length = 697
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 291/674 (43%), Positives = 423/674 (62%), Gaps = 31/674 (4%)
Query: 204 ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV---RGSVEPVRDLVS-GFEIAPG 259
+ + L+ + RCGV++T RKK++F L+QDL++L+ G L EIA
Sbjct: 8 DVEQLKKVVERCGVLVTMRKKSDFGIDTLIQDLNKLIMFEEGQQPNAHTLPQLQLEIASA 67
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+ A++ Y EL SD N Y + D ++ LDSA ++ALN+ + +KN S+ G+
Sbjct: 68 AVAAVIKYLELSSDSDNLNQYSVDDLGYDKFVHLDSAGVQALNLFSNSGTMSKNDSILGI 127
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIE 378
N+ C + G+RLL W++QPL D+N+IN RLDIV+ V DT +RQ L QHL+ I D++
Sbjct: 128 FNK-CRSPHGQRLLTQWIRQPLRDLNKINERLDIVETLVTDTDIRQQLHDQHLRTIPDLQ 186
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ-FSSLIKERYLDPLESLTDDD 437
LM +++++A LQ ++YQ+ +LP + L + + +S+I PL+ L +D
Sbjct: 187 ALMRKIQRKKANLQDCYRIYQAIQKLPDLVQTLSNSDDKTLNSVITT----PLKELVND- 241
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
+NK+ A++E ++DL +E GE++I S +D L ++N+ + E ++ S +T+ L +
Sbjct: 242 -MNKYQAMIEETIDLKLVERGEFLIQSGFDDELQEMRNQMDDYESKMESNLTKTSGALGI 300
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG-VKFTNTKLKKLGDQ 556
V KLD +Q+G F++ K+ + + VL+T K G ++F ++KL +L
Sbjct: 301 SV----KLDSNSQYGFFFKVLLKDAKTVSN--NKSYEVLDTTKGGGMRFRSSKLTELNTD 354
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
YQ + + Y QK +V VIQTA ++S +L+ L++LDVL SF+ LA+S PY RP
Sbjct: 355 YQSIHKNYLEHQKSIVVEVIQTASSYSATILNLSRTLAQLDVLTSFSMLAASSLRPYVRP 414
Query: 617 DINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
+++P G + L+ RHPCVE QD V++IPND +GK F +ITGPNMGGKST+IR V
Sbjct: 415 NLHPQGTGLLDLKQVRHPCVEVQDSVSYIPNDAYFNQGKCTFNVITGPNMGGKSTYIRSV 474
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
V + MA +GSFVPCD A ISV D I ARVGA D Q++G+STFM EM+ET SILK AT
Sbjct: 475 AVAVFMAHMGSFVPCDAAEISVVDAILARVGANDSQIKGLSTFMVEMIETVSILKRATSE 534
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SL+IIDELGRGTSTY+G G+A AI E L E +A TLFATHFHELT L HE
Sbjct: 535 SLVIIDELGRGTSTYEGCGIACAIAERLAVETKAFTLFATHFHELTKL-HET-------- 585
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HVSA +T LT+LY+V+PG+CD+SFGIHVA A FP++V+ A +K A L
Sbjct: 586 IPTITNKHVSAV--TTDDSLTLLYQVQPGSCDKSFGIHVAAMAKFPKNVIQNAAKKLALL 643
Query: 857 EDFTPSAVISDDAK 870
E F + ++ D+ K
Sbjct: 644 ESFQNNQILEDNQK 657
>gi|344231602|gb|EGV63484.1| DNA mismatch repair protein [Candida tenuis ATCC 10573]
Length = 969
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 329/907 (36%), Positives = 505/907 (55%), Gaps = 79/907 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLP-NDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTA 64
P+LK D + R + S + LP + +RF D +DY+TA ++AT IA + T +
Sbjct: 6 PDLKFGDNLEERRYYSRFSDLPAKNPNLIRFTDHNNKDYFTAIDDDATLIADAIFKTQSV 65
Query: 65 LRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGS 124
++ + V+++ +F L ++ +E+Y+ + L+ GTPGNL +
Sbjct: 66 IKTNQNNKNKY--VTIAPQVFLNNVLKYCLIENNYKVEIYDHK--TFSLIAMGTPGNLEA 121
Query: 125 YEDVLFANNEMQ----DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
+ + E +PV A+ + G +G+ VDL+ + ++EF D+ F+N
Sbjct: 122 ISNEYNIDLESMVADASSPVTAAVKFQQQGTGKKVGVCLVDLSNTSIRVSEFEDNDLFSN 181
Query: 181 VESALVALGCKECLLPT----EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
+ES L+ LG KE ++P+ E + + L L + GV+++ K + F +DL QDL
Sbjct: 182 LESLLIQLGVKEVIVPSNYDPENKQLGDVNKLFQTLDKVGVVMSTLKASFFSPKDLEQDL 241
Query: 237 DRLVRGSVEPVRDLVSG--------FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLD 288
+++ V +L+ G ++++ L AL+ Y LL D + I KY L+
Sbjct: 242 VKILSNEDTNV-ELILGAKGIASNDYQLSFACLNALIGYLGLLGDGEETKTFSIDKYDLE 300
Query: 289 SYMRLDSAAMRALNVLESKTDANKNF--------SLFGLMNRTCTAGMGKRLLHMWLKQP 340
SYM+LDS+ + ALN+ K N S+F L+N+ C G RLL WLKQP
Sbjct: 301 SYMKLDSSTLNALNIFPIKQSGGYNMNIKSNQISSIFELLNK-CKTNSGSRLLSQWLKQP 359
Query: 341 LLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMH----NLEKR---RAGLQ 392
L D I+ R +V+ ++DT LR + Q + ++ DI+RL+ NL+K L+
Sbjct: 360 LTDHIAISERQMLVEKLINDTNLRVFIDQEFMSQVPDIKRLIKRINSNLKKNGQDNKKLE 419
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFS----SLIKERYLDPLESLTDDDHLNKFIALVET 448
+V+LYQ + LP + L+ S +LI++ +L+P+ + L +F LVET
Sbjct: 420 DVVRLYQLFLNLPNLIEILKMSSDDESDSLRTLIEKNWLEPVTEKFE--KLRQFQGLVET 477
Query: 449 SVDLDQLE--------NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD 500
++DL L N ++ I+ ++ L + E +I H+ A DL++ +D
Sbjct: 478 AIDLSPLTSANTVSDLNTDFNINPDFEKSLKDVNRRLLQKEGEIKQQHELVADDLNIDID 537
Query: 501 KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKV 560
K LKL+ FR+T+ + +R T + L+T K GV FTN +L L ++ +
Sbjct: 538 KKLKLENHQIHNWCFRVTRNDSVVLR---GTNYTELQTVKAGVFFTNKELSALSKEHASI 594
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
L+EY + QKE++ ++ +TF IF L+T LS++DVLL+FA+ + P Y +P++ P
Sbjct: 595 LQEYNDKQKEIIQEILLITLTFETIFLELSTSLSQIDVLLAFANTSILSPIQYIKPNLVP 654
Query: 621 PD--VGD-------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKST 671
+ D + L+ SRHP +EAQD +NFIPND KL F IITGPNMGGKST
Sbjct: 655 LSERIDDETFGQRLVDLKNSRHPILEAQDDLNFIPNDVKLSNKDKSFAIITGPNMGGKST 714
Query: 672 FIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
+IRQVGV LM+Q+G F+PCD ++ + D I +RVGAGD QL+G+STFM EMLET+SIL
Sbjct: 715 YIRQVGVIALMSQIGCFIPCDEPGTLPIFDSILSRVGAGDSQLKGLSTFMIEMLETSSIL 774
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
AT SLIIIDELGRGTSTYDGFGLA++I E++++ + TLFATHFHELT
Sbjct: 775 SNATHNSLIIIDELGRGTSTYDGFGLAYSISEYIIKSKQCFTLFATHFHELT-------- 826
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
E NTK + N V A I ++T++YKVEPG +SFGI+VAE FP+ ++ +A+
Sbjct: 827 ELNTK-YDKIQNLQVKALI-GNGEEITLVYKVEPGISSKSFGINVAELVKFPQKIINMAK 884
Query: 851 EKAAELE 857
K++EL+
Sbjct: 885 RKSSELQ 891
>gi|344231603|gb|EGV63485.1| hypothetical protein CANTEDRAFT_123827 [Candida tenuis ATCC 10573]
Length = 952
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 329/907 (36%), Positives = 505/907 (55%), Gaps = 79/907 (8%)
Query: 9 PELKL-DAKQARGFLSFYKTLP-NDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTA 64
P+LK D + R + S + LP + +RF D +DY+TA ++AT IA + T +
Sbjct: 19 PDLKFGDNLEERRYYSRFSDLPAKNPNLIRFTDHNNKDYFTAIDDDATLIADAIFKTQSV 78
Query: 65 LRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGS 124
++ + V+++ +F L ++ +E+Y+ + L+ GTPGNL +
Sbjct: 79 IKTNQNNKNKY--VTIAPQVFLNNVLKYCLIENNYKVEIYDHK--TFSLIAMGTPGNLEA 134
Query: 125 YEDVLFANNEMQ----DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTN 180
+ + E +PV A+ + G +G+ VDL+ + ++EF D+ F+N
Sbjct: 135 ISNEYNIDLESMVADASSPVTAAVKFQQQGTGKKVGVCLVDLSNTSIRVSEFEDNDLFSN 194
Query: 181 VESALVALGCKECLLPT----EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
+ES L+ LG KE ++P+ E + + L L + GV+++ K + F +DL QDL
Sbjct: 195 LESLLIQLGVKEVIVPSNYDPENKQLGDVNKLFQTLDKVGVVMSTLKASFFSPKDLEQDL 254
Query: 237 DRLVRGSVEPVRDLVSG--------FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLD 288
+++ V +L+ G ++++ L AL+ Y LL D + I KY L+
Sbjct: 255 VKILSNEDTNV-ELILGAKGIASNDYQLSFACLNALIGYLGLLGDGEETKTFSIDKYDLE 313
Query: 289 SYMRLDSAAMRALNVLESKTDANKNF--------SLFGLMNRTCTAGMGKRLLHMWLKQP 340
SYM+LDS+ + ALN+ K N S+F L+N+ C G RLL WLKQP
Sbjct: 314 SYMKLDSSTLNALNIFPIKQSGGYNMNIKSNQISSIFELLNK-CKTNSGSRLLSQWLKQP 372
Query: 341 LLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMH----NLEKR---RAGLQ 392
L D I+ R +V+ ++DT LR + Q + ++ DI+RL+ NL+K L+
Sbjct: 373 LTDHIAISERQMLVEKLINDTNLRVFIDQEFMSQVPDIKRLIKRINSNLKKNGQDNKKLE 432
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFS----SLIKERYLDPLESLTDDDHLNKFIALVET 448
+V+LYQ + LP + L+ S +LI++ +L+P+ + L +F LVET
Sbjct: 433 DVVRLYQLFLNLPNLIEILKMSSDDESDSLRTLIEKNWLEPVTEKFE--KLRQFQGLVET 490
Query: 449 SVDLDQLE--------NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD 500
++DL L N ++ I+ ++ L + E +I H+ A DL++ +D
Sbjct: 491 AIDLSPLTSANTVSDLNTDFNINPDFEKSLKDVNRRLLQKEGEIKQQHELVADDLNIDID 550
Query: 501 KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKV 560
K LKL+ FR+T+ + +R T + L+T K GV FTN +L L ++ +
Sbjct: 551 KKLKLENHQIHNWCFRVTRNDSVVLR---GTNYTELQTVKAGVFFTNKELSALSKEHASI 607
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
L+EY + QKE++ ++ +TF IF L+T LS++DVLL+FA+ + P Y +P++ P
Sbjct: 608 LQEYNDKQKEIIQEILLITLTFETIFLELSTSLSQIDVLLAFANTSILSPIQYIKPNLVP 667
Query: 621 PD--VGD-------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKST 671
+ D + L+ SRHP +EAQD +NFIPND KL F IITGPNMGGKST
Sbjct: 668 LSERIDDETFGQRLVDLKNSRHPILEAQDDLNFIPNDVKLSNKDKSFAIITGPNMGGKST 727
Query: 672 FIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
+IRQVGV LM+Q+G F+PCD ++ + D I +RVGAGD QL+G+STFM EMLET+SIL
Sbjct: 728 YIRQVGVIALMSQIGCFIPCDEPGTLPIFDSILSRVGAGDSQLKGLSTFMIEMLETSSIL 787
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
AT SLIIIDELGRGTSTYDGFGLA++I E++++ + TLFATHFHELT
Sbjct: 788 SNATHNSLIIIDELGRGTSTYDGFGLAYSISEYIIKSKQCFTLFATHFHELT-------- 839
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
E NTK + N V A I ++T++YKVEPG +SFGI+VAE FP+ ++ +A+
Sbjct: 840 ELNTK-YDKIQNLQVKALI-GNGEEITLVYKVEPGISSKSFGINVAELVKFPQKIINMAK 897
Query: 851 EKAAELE 857
K++EL+
Sbjct: 898 RKSSELQ 904
>gi|406700021|gb|EKD03208.1| DNA mismatch repair protein MSH2 [Trichosporon asahii var. asahii
CBS 8904]
Length = 672
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/654 (42%), Positives = 410/654 (62%), Gaps = 37/654 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL-ESKTDANKNFSLFG 318
AL AL+SY EL+ D +G +++R++ L +M+LD++A++ALN++ + + NKN SL+G
Sbjct: 3 ALAALISYLELMMDTPMHGQFHLRRHDLSQFMKLDASAVKALNLMPQPELGGNKNMSLYG 62
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDI 377
L+N C G+RLL WLKQPL++ + I R D+V+ FV+D+ R+ L+ ++LKR+ D
Sbjct: 63 LLNH-CKTSQGQRLLGRWLKQPLVNRHAIQRRQDMVEMFVNDSVRRRTLQDEYLKRMPDF 121
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ---QYEGQFSSLIKERYLDPLESLT 434
R+ + AGL+ +V++YQ+ LP I +L + EG +++E ++ PL
Sbjct: 122 HRICKRFHRGGAGLEDLVRVYQAVAVLPKIIDSLDDLAKEEGMHGQVLEEDFIVPLREKA 181
Query: 435 DDDHLNKFIALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
L ++ AL+E S+DL++LE N Y + + D L ++ + + H++
Sbjct: 182 T--QLEQYSALIEESIDLEELEHNHHYHLQPTLDPELQQFRDSLLATRDGLDEEHRRVGR 239
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
L L ++K L L+ + + FR+TK E IR+ I L +K G FT KLK+L
Sbjct: 240 KLGLDIEKKLHLENNQVYNYSFRVTKAEANAIRQ--NPWCIELAVQKAGTIFTTEKLKEL 297
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
+Y ++ EEY+ QK L+ V+ A +++ + + L ++ LDVL+SFA ++++ P PY
Sbjct: 298 SAEYLRLQEEYEKKQKYLIKEVVGVASSYAPLLEELDGTIAALDVLVSFAHVSANAPIPY 357
Query: 614 TRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
+P + D+I+ G+RHPC+E QD +NFI ND ++ RG S F I+TGPNMGGKST+I
Sbjct: 358 VKPTVAEKGGSDVIVRGARHPCLEVQDDINFIANDHEMRRGNSEFAILTGPNMGGKSTYI 417
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQ+GV L+AQ+G FVP D A + + DC+ ARVGAGD QL+GVSTFM EMLETA+IL+ A
Sbjct: 418 RQLGVIALLAQLGCFVPADSAKLPIFDCVLARVGAGDSQLKGVSTFMAEMLETATILRSA 477
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFN 793
T SLIIIDELGRGTSTYDGFGLAWAI EH+ + IRA LFATHFHELTA+A+
Sbjct: 478 TRDSLIIIDELGRGTSTYDGFGLAWAISEHIAKNIRAFCLFATHFHELTAMAN------- 530
Query: 794 TKQMVGVANYHVSAHIDS-------TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
QM V N V A + + R++T+LY+V G DQSFGIHVAE A FP++VV
Sbjct: 531 --QMEWVKNLQVRAEVQPAPAGKSISDRQITLLYQVIEGHSDQSFGIHVAELARFPDAVV 588
Query: 847 TLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
LA+ KA ELEDF DDA +K ++ D ++ +G +FL E+
Sbjct: 589 KLAKRKADELEDFG----TEDDA-----AKMPKL-DEGEVEQGTQIVKEFLAEW 632
>gi|195164888|ref|XP_002023278.1| GL21272 [Drosophila persimilis]
gi|194105363|gb|EDW27406.1| GL21272 [Drosophila persimilis]
Length = 887
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 328/873 (37%), Positives = 483/873 (55%), Gaps = 76/873 (8%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTL---PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYY 59
E + P L +D R F+ ++ L P+ T VRF+D D YT +G ++ +AK Y
Sbjct: 7 ESRREPTLHMDTNARRNFIKYHAKLGEKPSTT--VRFYDHSDCYTVNGSDDCELVAKIVY 64
Query: 60 HTTTALRQL-GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGT 118
+T + L + L V++SK FE R+LLL R + +E+Y + W+L G+
Sbjct: 65 KSTAFIGALLPDDKETLQFVALSKGNFEMAVRELLLVR-NLRVEVYVKR-NEWQLEYRGS 122
Query: 119 PGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCT--IGLGYVDLTKRVLGLAEFLDDS 176
PGNL +ED+LFAN E+ +++L E G +G+ V+ L EFLDD
Sbjct: 123 PGNLLQFEDILFANKEVLVGNNMISLQVKL-EGGAQRRVGVASVEQNDCQFQLLEFLDDD 181
Query: 177 HFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL 236
FT +E+ +V LG KECLLP+ + K L L R GVM+T KK+ DL+QDL
Sbjct: 182 FFTELEATVVLLGPKECLLPSVEGEYVPVKAL---LERNGVMITVPKKS--SANDLLQDL 236
Query: 237 DRLVRGSVEPVRDLVSGFE-----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
+RL+R + D +G + +A +L + Y +L++D N G+Y I++ L ++
Sbjct: 237 NRLLRFAKGQQED-ATGLKELQMLLASESLKVAIKYLDLVNDAGNLGHYEIKQLDLKRFV 295
Query: 292 RLDSAAMRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNE 346
LDSAA+ ALN++ + + S+ G+++ C G RL+ W+KQPL
Sbjct: 296 HLDSAAVGALNIMPKPGTHPSMPSYRWQSILGVLDH-CRTPQGHRLMGKWVKQPLRSQEI 354
Query: 347 INARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP 405
+N R +IV+ ++ + + L +LKRI DI L L +R+A LQ + ++YQ +R P
Sbjct: 355 LNDRHNIVECLLESSDTLESLSLDYLKRIPDILMLTKKLMRRKATLQDLFRIYQVILRTP 414
Query: 406 YIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSS 465
I L E +S ++ P +S +D L +VE VD + +E GEY++ SS
Sbjct: 415 KIVQVLLSLE---NSTVESVICSPFKSFLED--LTGLKQMVEQVVDFEAIERGEYLVKSS 469
Query: 466 YDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
+D+ L L+ L ++ L + +LDL K +KL
Sbjct: 470 FDSRLMELQQTMNELYDKMERLKSKCNDELDLD-SKQIKLG------------------- 509
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
++++ K GV+FT+ KL+ D++ Y+ Q +V +IQ AV ++
Sbjct: 510 ------EYVI----KGGVRFTSDKLEGYADEFASCHSRYEEQQLSIVEEIIQVAVGYAAP 559
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFI 645
SL L++LD L+SFA A S PTPY RP++ G ++L RHPC+E Q+ V+FI
Sbjct: 560 LTSLNNELAQLDCLVSFAIAARSAPTPYVRPNMLAEGAGKLVLTDVRHPCLELQEHVSFI 619
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
N + K IITGPNMGGKST+IR VG +LMA VG+FVPC A+IS+ D I R
Sbjct: 620 ANSVSFKKDKCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCGMATISMVDSILGR 679
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D ++G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL
Sbjct: 680 VGASDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLA 739
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+E + TLFATHFHE+T LA + + V N H++A D+ + T+LY+V PG
Sbjct: 740 KETKCFTLFATHFHEITKLA---------ETLPTVKNCHMAALADADN--FTLLYQVRPG 788
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
++SFGI VA ANFPE VV A+E E ED
Sbjct: 789 VMEKSFGIQVARLANFPEDVVQNAQEVYNEFED 821
>gi|401883696|gb|EJT47891.1| DNA mismatch repair protein MSH2 [Trichosporon asahii var. asahii
CBS 2479]
Length = 672
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/654 (42%), Positives = 410/654 (62%), Gaps = 37/654 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL-ESKTDANKNFSLFG 318
AL AL+SY EL+ D +G +++R++ L +M+LD++A++ALN++ + + NKN SL+G
Sbjct: 3 ALAALISYLELMMDTPMHGQFHLRRHDLSQFMKLDASAVKALNLMPQPELGGNKNMSLYG 62
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDI 377
L+N C G+RLL WLKQPL++ + I R D+V+ FV+D+ R+ L+ ++LKR+ D
Sbjct: 63 LLNH-CKTSQGQRLLGRWLKQPLVNRHAIQRRQDMVEMFVNDSVRRRTLQDEYLKRMPDF 121
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ---QYEGQFSSLIKERYLDPLESLT 434
R+ + AGL+ +V++YQ+ LP I +L + EG +++E ++ PL
Sbjct: 122 HRICKRFHRGGAGLEDLVRVYQAVAVLPKIIDSLDDLAKEEGMQGQVLEEDFIVPLREKA 181
Query: 435 DDDHLNKFIALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
L ++ AL+E S+DL++LE N Y + + D L ++ + + H++
Sbjct: 182 T--QLEQYSALIEESIDLEELEHNHHYHLQPTLDPELQQFRDSLLATRDGLDEEHRRVGR 239
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
L L ++K L L+ + + FR+TK E IR+ I L +K G FT KLK+L
Sbjct: 240 KLGLDIEKKLHLENNQVYNYSFRVTKAEANAIRQ--NQWCIELAVQKAGTIFTTEKLKEL 297
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
+Y ++ EEY+ QK L+ V+ A +++ + + L ++ LDVL+SFA ++++ P PY
Sbjct: 298 SAEYLRLQEEYEKKQKYLIKEVVGVASSYAPLLEELDGTIAALDVLVSFAHVSANAPIPY 357
Query: 614 TRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
+P + D+I+ G+RHPC+E QD +NFI ND ++ RG S F I+TGPNMGGKST+I
Sbjct: 358 VKPTVAEKGGSDVIVRGARHPCLEVQDDINFIANDHEMRRGNSEFAILTGPNMGGKSTYI 417
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQ+GV L+AQ+G FVP D A + + DC+ ARVGAGD QL+GVSTFM EMLETA+IL+ A
Sbjct: 418 RQLGVIALLAQLGCFVPADSAKLPIFDCVLARVGAGDSQLKGVSTFMAEMLETATILRSA 477
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFN 793
T SLIIIDELGRGTSTYDGFGLAWAI EH+ + IRA LFATHFHELTA+A+
Sbjct: 478 TRDSLIIIDELGRGTSTYDGFGLAWAISEHIAKNIRAFCLFATHFHELTAMAN------- 530
Query: 794 TKQMVGVANYHVSAHIDS-------TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
QM V N V A + + R++T+LY+V G DQSFGIHVAE A FP++VV
Sbjct: 531 --QMEWVKNLQVRAEVQPAPAGKSISDRQITLLYQVIEGHSDQSFGIHVAELARFPDAVV 588
Query: 847 TLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEF 900
LA+ KA ELEDF DDA +K ++ D ++ +G +FL E+
Sbjct: 589 KLAKRKADELEDFG----TEDDA-----AKMPKL-DEGEVEQGTQIVKEFLAEW 632
>gi|448514859|ref|XP_003867187.1| Msh2 DNA mismatch repair factor [Candida orthopsilosis Co 90-125]
gi|380351526|emb|CCG21749.1| Msh2 DNA mismatch repair factor [Candida orthopsilosis]
Length = 894
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 321/849 (37%), Positives = 486/849 (57%), Gaps = 63/849 (7%)
Query: 31 DTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETI 88
D +RF D +DY+T ++A IA Y T + ++ SD V++S +F+T+
Sbjct: 26 DASTIRFIDHNNKDYFTCLEDDAELIADEIYKTRSVIKT----SDKTKYVTISPQVFQTV 81
Query: 89 ARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTP--VIVALFP 146
+ LLE+ +E+Y + ++L+ SGT GNL N E QD I A+
Sbjct: 82 LKFCLLEK-QFRVEIY--NNRTYQLLVSGTAGNLEGISKEYGINFEFQDCSGSSIAAI-- 136
Query: 147 NFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECK 206
+ G ++G+ ++ +K + L EF D+ ++N+E L+ G KE +LP SE K
Sbjct: 137 --KLQGNSVGVCIIEDSK--IYLCEFEDNELYSNLEGLLLQFGIKEVVLPN----LSEKK 188
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL----- 261
L+ + + G ++ + F T+++ QDL +L+ + G ++ +L
Sbjct: 189 LLQ-VINKIGNVVVSTI-SAFNTKNIEQDLVKLLEEDNIQMMFSSKGMKLTEYSLSLSCC 246
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMN 321
AL++Y ELL ++S + + + KY L +YM+LDS+ ++ALNV + N S+F L+N
Sbjct: 247 NALVAYLELLENDSKH--FSVDKYDLSAYMKLDSSTIKALNVFPEFKSTSIN-SIFELLN 303
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
+ T+G G RLL WLKQPL +V I R +VQ ++D +LR ++ L ++ DI+RL+
Sbjct: 304 KCKTSG-GSRLLSQWLKQPLTNVEAIEERQSLVQLLMEDASLRVAVQNVLTQVPDIKRLL 362
Query: 382 HNLE-------KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
+ L+ +V+LYQ + LP + L+ L+ + +LDP+
Sbjct: 363 KKMTIAIGKIGNENKKLEDLVRLYQLVLVLPDLIEVLKDQ----GDLVIKYWLDPISK-- 416
Query: 435 DDDHLNKFIALVETSVDLDQLE--NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
L KF LVET+VDL L N + I +D L ++ ++S QI LH Q A
Sbjct: 417 HHQALLKFQELVETTVDLKGLSDLNSNFDIRPEFDASLVSINERKQSSLEQIKQLHLQVA 476
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
DL++ +K LKL++ Q G+ R+T+ + +R +I L+T K GV FT +L+K
Sbjct: 477 DDLNMDSEKKLKLEQHQQHGYCLRLTRNDSVVLRN--NKNYIELQTVKAGVYFTTAQLRK 534
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
L Y +EY Q+EL+ V+ ++T+ +F L+ LS LDV+ SFA++A PT
Sbjct: 535 LSQVYSNSCDEYNIKQRELIREVLSISLTYQGVFSVLSLDLSHLDVITSFANVALLAPTS 594
Query: 613 YTRPDINPPDVGD--IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
+T+P + P D + I L SRHP +E QD V+FIPND + G +F IITGPNMGGKS
Sbjct: 595 FTKPKLIPMDSKERRISLHDSRHPLLEVQDHVDFIPNDVSM--GNKFFNIITGPNMGGKS 652
Query: 671 TFIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
T+++Q+ LMAQVGSF+P + A + V D I +RVGAGD QL+G+STFM EMLET+SI
Sbjct: 653 TYLKQIATTGLMAQVGSFIPAESGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSI 712
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENA 789
L AT SL+IIDELGRGTSTYDGFGLAW+I EHL++ + LFATHFHEL LA +
Sbjct: 713 LATATSNSLLIIDELGRGTSTYDGFGLAWSISEHLIQTKKCFALFATHFHELNKLAEKYP 772
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
+ V N HV A++++ +T++YK+EPG +SFGI+VAE FP ++ +A
Sbjct: 773 H--------SVENLHVVAYVENKD-DITLMYKIEPGISSKSFGINVAEMVKFPPKIINMA 823
Query: 850 REKAAELED 858
+ KA EL++
Sbjct: 824 KRKADELQN 832
>gi|443898651|dbj|GAC75985.1| mismatch repair ATPase MSH2 [Pseudozyma antarctica T-34]
Length = 726
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 284/650 (43%), Positives = 403/650 (62%), Gaps = 36/650 (5%)
Query: 221 ERKKTEFKTRDLVQDLDRLVR----GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESN 276
+ ++ +F +++ QDL RL++ G P DL ++A A AL+SY LL+DE N
Sbjct: 3 DNRRADFSGKNIEQDLRRLLKDESAGITIPELDL----KVAMAAAAALVSYLALLTDEHN 58
Query: 277 YGNYYIRKYSLDSYMRLDSAAMRALNVLE--SKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
+G Y IR + L Y+RLD++A+RALN+ +T ++KN S+FGL+NR C G G+RLL
Sbjct: 59 FGQYTIRTHDLSQYLRLDNSALRALNLFPEPGQTGSSKNTSVFGLLNR-CRTGQGQRLLG 117
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQ 393
WLKQPL++V+ I R D+V+ FV D + RQ+++ LK + D+ R+ +K A L+
Sbjct: 118 QWLKQPLVNVHAIQQRQDLVEVFVRDNSSRQNVQSDFLKLMPDMHRISKRFQKGVATLED 177
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSS---LIKERYLDPLESLTDDDHLNKFIALVETSV 450
+V++YQ+ +RLP + L + + L+ Y++PL+ + L KFI LVE ++
Sbjct: 178 VVRVYQAVLRLPGLIQTLADIDTPSEAHQLLLDSTYIEPLK--LHEAALAKFIELVEATL 235
Query: 451 DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQ 510
DL++L + ++I +D L +K + ++ H+ +L + +K L L+
Sbjct: 236 DLNELTHHNFVIKPDFDDNLRQIKEALDDTRDKLDEQHRAAGKELRMDTEKKLHLENHHV 295
Query: 511 FGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKE 570
+G+ R+T+ + +R K + + T K G+ FTN L+ L ++ + E Y Q
Sbjct: 296 YGYCLRVTRTDASLVRNK--KGYSDIATVKGGLYFTNEALRDLSTDFKDLSERYNRSQSG 353
Query: 571 LVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV-GDIILE 629
LV VIQ A ++ + L +L+ LDV++SFA ++ S P PY +P ++ D+ L
Sbjct: 354 LVKEVIQIASSYCPPLEKLNVVLAHLDVIVSFAHVSESAPVPYVKPIVSEKGTNADVELR 413
Query: 630 GSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
+RHPC+E D VNFIPND +++RG S F +ITGPNMGGKST+IRQVG+ LMAQVG FV
Sbjct: 414 EARHPCLEVMDDVNFIPNDTEMVRGASEFLVITGPNMGGKSTYIRQVGIMALMAQVGCFV 473
Query: 690 PC-DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
P + A + V DCI ARVGAGD QL+GVSTFM EMLETA+ILK AT SLIIIDELGRGT
Sbjct: 474 PAAEGARLPVFDCILARVGAGDSQLKGVSTFMAEMLETATILKTATADSLIIIDELGRGT 533
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
STYDGFGLAWAI E + +R LFATHFHELT LA + A+ V N HV AH
Sbjct: 534 STYDGFGLAWAISEWIATNVRCKCLFATHFHELTNLASQQAH---------VRNLHVVAH 584
Query: 809 IDS------TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
++ R +T+LYKVEPG DQS GI+VAE ANFP SV+ LA+ K
Sbjct: 585 VEQRKGGSRQDRDITLLYKVEPGISDQSLGINVAELANFPPSVIALAKRK 634
>gi|195579202|ref|XP_002079451.1| GD23963 [Drosophila simulans]
gi|194191460|gb|EDX05036.1| GD23963 [Drosophila simulans]
Length = 879
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 321/870 (36%), Positives = 472/870 (54%), Gaps = 78/870 (8%)
Query: 4 EQNKLPELKLDAKQARGFLSFYKTL-PNDTRAVRFFDRRDYYTAHG-ENATFIAKTYYHT 61
E + P L +D R F+ F+ L VRFFD D YT HG ++ +AK Y +
Sbjct: 7 ESRQEPTLNMDTNARRNFIKFHAKLGEKPATTVRFFDHSDRYTVHGSDDCELVAKIVYKS 66
Query: 62 TTALRQL--GTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTP 119
T + L + L VS+SK FE R+LLL R ++ +E+Y + S+W + G+P
Sbjct: 67 TAFIGALLPDDKKETLQFVSMSKGNFERAVRELLLVR-NYRVEVYVKNSSDWEIEYRGSP 125
Query: 120 GNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCT-IGLGYVDLTKRVLGLAEFLDDSHF 178
GNL +ED+LF+N E+ I++L G +G+ V+ L EFLDD F
Sbjct: 126 GNLLQFEDILFSNKEVLVGNSIISLLVKLDAGGQRRVGVASVEQNDCKFQLLEFLDDDLF 185
Query: 179 TNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDR 238
T +E+ +V LG KECLLP+ S KTL D R GVM+T KK+ DL+QDL+R
Sbjct: 186 TELEATVVLLGPKECLLPSIEGDYSAVKTLLD---RNGVMITVPKKS--GANDLLQDLNR 240
Query: 239 LVR---GSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
L+R G E L ++A AL + Y +L++D N G+Y I++ L ++ LD
Sbjct: 241 LLRFAKGQQEDATGLKELQLQLASNALKTAIKYLDLVNDPGNLGHYEIKQLDLKRFVHLD 300
Query: 295 SAAMRALNVL-----ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
SAA+ ALN++ + + S+ G+++ C G RL+ W+KQPL + +N
Sbjct: 301 SAAVAALNIMPKPGTHPSMPSYRWQSVLGVLDH-CRTPQGHRLMGQWVKQPLRSRDILND 359
Query: 350 RLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIR 408
R +IVQ ++ + L +LKRI DI L L +R+A LQ + ++YQ +R P I
Sbjct: 360 RHNIVQCLLESPDTLETLSLDYLKRIPDILMLTKKLMRRKANLQDLFRIYQVILRTPKIL 419
Query: 409 SALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDT 468
L + + +S I+ +P ++ D L +VE VD + +E GEY++ +S+D+
Sbjct: 420 KVLLELD---NSTIESVICEPFKNFLMD--LTGLKQMVEQVVDFEAIERGEYLVKASFDS 474
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKK 528
L L+ L ++ L + +L+L +KL+ + GH FRIT K++ +RK
Sbjct: 475 RLMELQQTMTELYSKMEELQFKCTQELNLDGKNQVKLESVAKLGHHFRITVKDDSVLRK- 533
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+ +++ K GV+FT+ KL+ D++ Y+ Q+ +V +IQ AV ++
Sbjct: 534 -NKNYRIVDVIKGGVRFTSDKLQGYADEFASCRTRYEEQQQSIVEEIIQVAVGYASPLTL 592
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPND 648
L L++LD L+SFA A S PT Y RP++
Sbjct: 593 LNNELAQLDCLVSFAIAARSAPTLYVRPEVQ----------------------------- 623
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
I GPNMGGKST+IR VG +LMA +G+FVPC A+IS+ D I RVGA
Sbjct: 624 ---------HVYIMGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILGRVGA 674
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
D ++G+STFM EM+ET+ I++ ATD+SL+IIDELGRGTSTY+G G+AW+I EHL +E
Sbjct: 675 SDNIIKGLSTFMVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKET 734
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACD 828
+ TLFATHFHE+T LA + + V N H++A D+ T+LY+V PG +
Sbjct: 735 KCFTLFATHFHEITKLA---------ETLPTVKNCHMAAVADADD--FTLLYQVRPGVME 783
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELED 858
+SFGI VA ANFPE VV A+E E ED
Sbjct: 784 KSFGIQVARLANFPEHVVQNAQEVYNEFED 813
>gi|354547057|emb|CCE43790.1| hypothetical protein CPAR2_500160 [Candida parapsilosis]
Length = 890
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 316/848 (37%), Positives = 485/848 (57%), Gaps = 62/848 (7%)
Query: 31 DTRAVRFFDR-RDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIA 89
D +RF D +DY+T +A IA Y T + ++ SD V++S +F+ +
Sbjct: 26 DASTIRFIDHNKDYFTCLESDAELIADEIYKTRSVIK----TSDKTKYVTISPQVFQNVL 81
Query: 90 RDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQD--TPVIVALFPN 147
+ LLE+ +E+Y ++L+ SGT GNL S N E D I A+
Sbjct: 82 KFCLLEK-QFRVEIYHNR--TYQLLVSGTAGNLESISKEYGINFEFHDCSNSSIAAI--- 135
Query: 148 FRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKT 207
+ +G ++G+ ++ K + L EF D+ ++N+E L+ G KE +LP + K
Sbjct: 136 -KIHGNSVGVCIIEDNK--VDLCEFEDNELYSNLEGLLLQFGIKEVVLPNLS-----DKK 187
Query: 208 LRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS----VEPVRDL-VSGFEIAPGALG 262
L + + ++ + F T+++ QDL +L+ V + + ++ + ++ +
Sbjct: 188 LLQVINKISNIVVS-TISAFNTKNIEQDLVKLLEEDNLQMVFSSKGMKLTEYSLSLSSCN 246
Query: 263 ALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNR 322
AL+ Y ELL ++S N+ I KY L +YMRLDS+ ++ALNV + N S+F L+N+
Sbjct: 247 ALIVYLELLENDSK--NFTINKYDLSAYMRLDSSTIKALNVFPEFKSTSIN-SIFELLNK 303
Query: 323 TCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMH 382
+ T G G RLL WLKQPL +V+ I R +VQ ++D +LR ++ L ++ DI+RL+
Sbjct: 304 SKTPG-GSRLLSQWLKQPLTNVDAIEERQALVQLLMEDASLRVAVQNVLTQVPDIKRLLK 362
Query: 383 NLE-------KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD 435
+ L+ +V+LYQ + LP + L+ + L+ + +LDP+
Sbjct: 363 KMSISIGKIGNENKKLEDLVRLYQLVLVLPELVDVLKGRD----DLVTKYWLDPISK--H 416
Query: 436 DDHLNKFIALVETSVDLDQLEN--GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
L KF LVET+VDL L + + I +D L ++ ++S +QI LH Q A
Sbjct: 417 HQLLLKFQELVETTVDLKGLNDLHSNFDIRPEFDASLVSINERKQSSLKQIKQLHLQIAD 476
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+L++ +K LKL++ Q G+ R+T+ + +R +I L+T K GV FT +++KL
Sbjct: 477 NLNMDSEKKLKLEQHQQHGYCLRLTRNDSVVLRN--NKNYIELQTVKAGVYFTTAQMRKL 534
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
Y +EY Q+EL+ V+ ++T+ +F +L+ LS LDV+ SFA++A PT +
Sbjct: 535 SQVYANSCDEYNIKQRELIREVLSISLTYQGVFSALSLDLSHLDVIASFANVALLAPTTF 594
Query: 614 TRPDINPPDVGD--IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKST 671
T+P + P + I L SRHP +E QD V+FIPND + G +F IITGPNMGGKST
Sbjct: 595 TKPKLIPMHAKERRIKLNDSRHPLLEVQDDVDFIPNDVSM--GDKFFNIITGPNMGGKST 652
Query: 672 FIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
+++Q+ LMAQVGSF+P + A + V D I +RVGAGD QL+G+STFM EMLET+SIL
Sbjct: 653 YLKQIATTGLMAQVGSFIPAEPGAELPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSIL 712
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
AT SL+IIDELGRGTSTYDGFGLAW+I EHL++ + LFATHFHEL LA + N
Sbjct: 713 ATATSNSLLIIDELGRGTSTYDGFGLAWSISEHLIQHKKCFALFATHFHELNKLAEKYPN 772
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
V N HV A++++ +T++YK+EPG +SFGI+VAE FP ++ +A+
Sbjct: 773 --------SVENLHVVAYVENKD-DITLMYKIEPGISSKSFGINVAEMVKFPTKIINMAK 823
Query: 851 EKAAELED 858
KA EL++
Sbjct: 824 RKADELQN 831
>gi|358338323|dbj|GAA56654.1| DNA mismatch repair protein MSH2 [Clonorchis sinensis]
Length = 764
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 291/706 (41%), Positives = 426/706 (60%), Gaps = 44/706 (6%)
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSG-------FEIAPG--ALGAL 264
R G + TE +K+ F +D+ QDL+ L+R P +G FE G LGA+
Sbjct: 15 RTGFLATEVEKSNFALQDVTQDLNYLLR---RPRGIQTTGISQDNKAFEHKQGLACLGAI 71
Query: 265 LSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTC 324
+ Y +L SD+SN G + + +SLD+++RLDSAA RAL++L D N+ S++G++N C
Sbjct: 72 IKYLDLKSDDSNAGVFSLEPFSLDNFVRLDSAATRALHLLPGPDDKNRYQSVYGVLN-NC 130
Query: 325 TAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHN 383
G+RLL WL+QPL D+N+IN RLD+V+A V++T +RQ L L+R+ D +R+
Sbjct: 131 RTQQGQRLLAQWLRQPLTDINKINERLDMVEALVEETGVRQSLHDDFLRRMPDFQRIGRK 190
Query: 384 LEKRRA-GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKF 442
L++++ GLQ + ++YQ+ RL S L+Q GQ S +++ ++PL+ ++ +KF
Sbjct: 191 LQRKQGCGLQDVYRIYQAVARLQNAISLLRQCGGQTSLAVQKCLIEPLQVAAEN--FSKF 248
Query: 443 IALVETSVDLDQLEN-GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDK 501
+V++++DL+ ++ EY+I S +D L LK++ + LE I +++A L+L K
Sbjct: 249 QEMVQSTIDLEMIQRRNEYIIRSDFDDELGELKSKLDKLEESIEDEFRRSARKLNLEPGK 308
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
++KLD Q G+ R+T KEE +R F VL+ +K GV+F N+ + +L + ++
Sbjct: 309 SVKLDSNEQLGYFMRVTLKEEKTLRD--FKSFEVLDAQKGGVRFRNSSMSQLNTSHLEMK 366
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA-SSCPTPYTRPDINP 620
+EY Q+ +V+ V++ + E L + LDV++S A A S+ Y RP + P
Sbjct: 367 QEYAAAQQTIVDEVLRITAGYLEPIHELNACTALLDVIVSLAVTACSATGGQYVRPRLLP 426
Query: 621 PDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+ G ++ + RHPC+E QD + IPND L RGK F +ITGPNMGGKST+IR VGV
Sbjct: 427 RESGRMVFKEMRHPCLELQDTASVIPNDVHLERGKQIFLVITGPNMGGKSTYIRSVGVIT 486
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
MAQ+GSFVPC A + D + ARVGA DCQ+RGVSTFM EMLET+S+L+ AT SL+I
Sbjct: 487 AMAQIGSFVPCSFAELFPVDAVMARVGAADCQIRGVSTFMAEMLETSSVLRAATPNSLVI 546
Query: 741 IDELGRGTSTYDGFGLAWAICEHLV-EEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
IDELGRGTST+DGFGLAWA+ HL ++ +LFATHFHELT LA + M G
Sbjct: 547 IDELGRGTSTFDGFGLAWAVASHLAGPQLGCFSLFATHFHELTTLA---------RHMPG 597
Query: 800 -VANYHVSAHIDSTS-------RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
VAN V+AH+ S + MLYKVEPG C +S+G+ VA+ P+ V+T A
Sbjct: 598 RVANLRVTAHVSPESSADSINGSSVVMLYKVEPGICTRSYGLDVAKLVGLPDKVLTEAEH 657
Query: 852 KAAELEDFTPSAVISDDAKIEVGSKR----KRISDPNDMSRGAARA 893
KAA E S ++ D K + S KRI +D+S A A
Sbjct: 658 KAARDEQLE-SLWLTLDGKYRMDSDGDPACKRIRLDSDVSEVHASA 702
>gi|67972282|dbj|BAE02483.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/581 (45%), Positives = 370/581 (63%), Gaps = 21/581 (3%)
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
N I RL++V+AFV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +
Sbjct: 39 NRIEERLNLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQ 98
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMIS 463
LP + AL+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++
Sbjct: 99 LPNVIQALEKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVK 156
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
S+D LS L+ LE+++ S A DL L K +KLD TQFG+ FR+T KEE
Sbjct: 157 PSFDPNLSELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEK 216
Query: 524 KIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
+R F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ + +
Sbjct: 217 VLRN--NKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYV 274
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN 643
E ++L +L++LD ++SFA +++ P PY RP I G IIL+ SRH CVE QD +
Sbjct: 275 EPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIT 334
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
FIPND + K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI
Sbjct: 335 FIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCIL 394
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
ARVGAGD QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E+
Sbjct: 395 ARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEY 454
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
+ +I A +FATHFHELTALA+ Q+ V N HV+A +T LTMLY+V+
Sbjct: 455 IATKIGAFCMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTMLYQVK 503
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
G CDQSFGIHVAE ANFP+ V+ A++KA ELE+F S +E +K+ +
Sbjct: 504 KGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGE-SQGYDMEPAAKKCYL--- 559
Query: 884 NDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+ +G +FL + MP M + ++K++K ++
Sbjct: 560 -EREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEV 599
>gi|256087125|ref|XP_002579727.1| hypothetical protein [Schistosoma mansoni]
Length = 895
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 316/865 (36%), Positives = 463/865 (53%), Gaps = 94/865 (10%)
Query: 20 GFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV 78
GF SF+K+L P +R F+R + T H +A +A YY + +++ G +LS V
Sbjct: 10 GFYSFWKSLGPKPPTTLRCFERGEMMTLHDSDAILVATDYYKNLSLVKRFSRGKSSLSYV 69
Query: 79 SVSKNMFETIARDLLLERTDHTLELYE-----GSGSNWRLVKSGTPGNLGSYEDVLFANN 133
+V K + + R LL+R + +E+Y G + W L +PG+L S ED+L + +
Sbjct: 70 TVKKQNTDFL-RHFLLKR-QYRIEIYCSTTKCGRDNEWSLKLKASPGDLSSIEDLLTSTS 127
Query: 134 EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKEC 193
E + + A+ + L + D + + EF+D H N+E+ALV L +EC
Sbjct: 128 ESVEACGLSAVNIKQLNEQIHVCLAFCDTESQKFLVGEFMDSVHLANLETALVQLKTREC 187
Query: 194 LLPT-----EAVKSSECKTLRDALT--------RCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+PT + S+ L +A++ R GV+ TE KK+EF QD
Sbjct: 188 LVPTGLLSHPDISKSDVTLLDNAISEHVSLVFERTGVLPTEVKKSEFSHIIKPQD----- 242
Query: 241 RGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
LSY E+ G+ K
Sbjct: 243 ------------------------LSYFLRFEKENPNGSLLYEK---------------- 262
Query: 301 LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
NK S++G +N C G+RLL WL+QPL+D ++I RLD+V++FV++
Sbjct: 263 ---------ENKFHSVYGTLN-NCRTAQGQRLLAQWLRQPLIDKSKIEERLDLVESFVEE 312
Query: 361 TALRQDLRQ-HLKRISDIERLMHNLEK-RRAGLQQIVKLYQSSIRLPYIRSALQQYEGQF 418
T +R+ L + L+RI D++RL L+K + +GLQ + ++YQ+ +RLPY S L QY G
Sbjct: 313 TGIRRGLHEDFLRRIPDLQRLGRRLKKIKGSGLQDVYRIYQAVLRLPYAVSLLNQYTGSK 372
Query: 419 SSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQL-ENGEYMISSSYDTGLSALKNEQ 477
S + E D F LVE+++DLD + + E+++ + D L ++N+
Sbjct: 373 QSTVYESM----------DSFILFKDLVESNIDLDYVNQRNEFIVRADKDPLLQEIRNKL 422
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
++LE +I ++ A L+L +K++KL+ G+ R+T K+E +R T F +L+
Sbjct: 423 DNLEERIRDEFRRCAKILNLEQNKSIKLESNELHGYFMRVTLKDEKCLRGLKT--FEILD 480
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
T+K GV+F N ++ L + Y +V +EY Q+ +V++V+ A T+ E L + LD
Sbjct: 481 TQKGGVRFRNKQMTSLTETYAEVKQEYNGLQEVVVHQVVCAAATYLEPINQLNETTAFLD 540
Query: 598 VLLSFADLA-SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
V++S A A SS Y RP I D G IIL+ +RHPC+E QD V+ IPND L RGK
Sbjct: 541 VIVSLAIAAISSSGVSYIRPKILSEDNGRIILKEARHPCLEMQDRVSVIPNDIHLERGKQ 600
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F IITGPNMGGKST+I V V + MAQ+GSFVPC A I D I ARVGA D Q RGV
Sbjct: 601 IFLIITGPNMGGKSTYIHSVAVIVAMAQIGSFVPCSYAEIMPVDAIMARVGAADYQCRGV 660
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE-EIRAPTLFA 775
STF+ EMLET+S+L+ T SL+IIDELGRGTSTYDGFGLAWA+ L E+ LFA
Sbjct: 661 STFLAEMLETSSVLRSVTRNSLVIIDELGRGTSTYDGFGLAWAVASFLASPEVGCFGLFA 720
Query: 776 THFHELTALAHENANEF-NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
THFHELT+LA+ N + + V+N + K+TMLYKVE G C +S+G+
Sbjct: 721 THFHELTSLAYYMPKRVANLRVLCNVSNDKEIVENKESETKVTMLYKVEAGVCSRSYGLD 780
Query: 835 VAEFANFPESVVTLAREKAAELEDF 859
VA A P V+ A + ++ E+
Sbjct: 781 VARLAGLPIEVIKQAEHQTSKDEEL 805
>gi|299115252|emb|CBN74093.1| MutS protein homolog 2A [Ectocarpus siliculosus]
Length = 828
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 311/838 (37%), Positives = 458/838 (54%), Gaps = 70/838 (8%)
Query: 128 VLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVA 187
V + + Q T + A P RE G D + L + EFLD+ F+N+++ ++
Sbjct: 25 VKYKVSRHQRTVGVAARMPRQRE-------GMDDKVQWTLVVYEFLDNDQFSNLDTLMLQ 77
Query: 188 LGCKECLLPTEAVKSSECKTLRD------ALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
L +CLL +A ++E K D A+ R V + + K +FKT D+ + L+
Sbjct: 78 LAPGQCLLTLDA-GAAEGKPRGDMAKVLAAMERLDVAVEDVKGGQFKTDDIAGRMKALLG 136
Query: 242 GSVEPVRDLVSGFEIAPGALGALLSYAE----------LLSDESNYGNYYIRKYSLDSYM 291
+ L + + L AL+ E + +Y + + +L ++
Sbjct: 137 DASLAQHSLANEQPLGSACLAALMGRLEREDKGYENEEGEGESPEMPSYALVQGTLQKHL 196
Query: 292 RLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARL 351
RLDSAA A+ +L T ++ SLF ++NR C MG RLL WL+QPL D EI R
Sbjct: 197 RLDSAAAAAVTLLPDPTAPHQYGSLFDVLNR-CKTKMGSRLLERWLRQPLTDKEEIERRH 255
Query: 352 DIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
D+V D+ LR L+ LK D++ L +++++AGL ++ KLY S +
Sbjct: 256 DMVGLLKDEAGLRGSLQDGPLKACPDLDTLKTKMQRKKAGLMEVFKLYVFSRSVHTFGDV 315
Query: 411 LQQYEGQFSS-----------LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGE 459
L G F LI ++++ L D ++F+ LVE +D+D L +
Sbjct: 316 LS---GHFGEDEGEEETETETLINDKFVKGFAKLADG--FSRFLQLVEHVLDMDALPD-- 368
Query: 460 YMISSSYDTGLSALKNEQESLERQIHSLHKQTASD--LDLPVDKALKLDKGTQFGHVFRI 517
+++SSY L L+ E + ++ ++ LH Q A D D LD+ Q G FR+
Sbjct: 369 LVVNSSYSPELGELREEMDQIKEEVEDLH-QEARDGWCDFGEKDKCLLDEDKQRGFFFRL 427
Query: 518 TK---KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
TK ++E K R+K VL K+GV FT ++LKKLG +Y+ EY+ Q LV +
Sbjct: 428 TKANLEQELKRRRKGVETLAVL---KNGVHFTTSELKKLGSRYKSCRLEYEEKQSGLVEK 484
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
++TA T+ + +S + ++SELD+L+SFAD+A+ PT RP + G + + G RHP
Sbjct: 485 AVETAATYLPLVESASALVSELDILVSFADVAALAPTELVRPTMKDKGTGVLKVMGCRHP 544
Query: 635 CVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
C+E QD +NFIPND + + F ++TGPNMGGKST+IR +G +MAQVGSFVPC+ A
Sbjct: 545 CLEWQDEMNFIPNDYDMSSDGASFVVVTGPNMGGKSTYIRTLGAVTVMAQVGSFVPCESA 604
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+SVRD +FARVGAGD Q RGVSTFM EMLE ++I+ A+ SLIIIDELGRGTST+DGF
Sbjct: 605 EMSVRDAVFARVGAGDAQQRGVSTFMAEMLEASAIISAASKDSLIIIDELGRGTSTFDGF 664
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
GLAW+I EH+V+ +AP LFATHFHE+T +A + V N HV+A +
Sbjct: 665 GLAWSISEHIVKTTQAPCLFATHFHEMTTMAEHDKR---------VKNMHVTAQ--AKED 713
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVG 874
K+TMLY+V G C +SFGIHVA A FP +V+ A+ KAA LE+F + + E G
Sbjct: 714 KITMLYEVREGPCLESFGIHVATMAGFPRAVIREAKRKAATLENFEEAM---ERTGGETG 770
Query: 875 SKRKRISDPNDMSRGA---ARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAG 929
+RK+ + S G + H+ L F +P++ M EAL +++ D L +G
Sbjct: 771 EQRKKTKTDGEGSGGGHNTTKLHRLLDMFKGLPIDVMSPNEALAATRQLVDKLYVGSG 828
>gi|391347199|ref|XP_003747852.1| PREDICTED: DNA mismatch repair protein Msh2-like [Metaseiulus
occidentalis]
Length = 908
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 305/854 (35%), Positives = 477/854 (55%), Gaps = 53/854 (6%)
Query: 14 DAKQARGFLSFYKTLP-NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGS 72
D + + FL F K P + VRF+DR+ Y++ H ++AT +K + Q
Sbjct: 12 DVTRDKTFLRFLKDGPAKSSTTVRFYDRKTYFSVHFDDATLASKCLLKVSIKNIQ----- 66
Query: 73 DALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFAN 132
+ S + + +E ++LLL + + +E+Y + W +VKS +PGNL EDVLFA
Sbjct: 67 -GIPSAWIGQGNYERFLKELLLVKA-YRVEIYAETPDGWEMVKSASPGNLVEVEDVLFAT 124
Query: 133 NEMQDTPVIVALFPNF--------RENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESA 184
+ Q +IV+ N + IG+ + D + L + + LD++ T ++
Sbjct: 125 DSPQ---LIVSSHRNGIASLQFTPQNESVLIGVAFCDPVLQRLKVTQILDNTMLTKLQVL 181
Query: 185 LVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSV 244
L+ + KE ++PT+ L L R + E F ++L QDL+++ +
Sbjct: 182 LIQISPKEMVIPTKM-----DDKLHKLLRRNNITFYEVAADHFNDKNLEQDLEKIYKFGK 236
Query: 245 EPVRDLVSGFEI----APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRA 300
+ +++ E+ A L ALL + L S S++ + +++ D+ MRLD+AA+ A
Sbjct: 237 KQAKNIQILPELLVQQARKPLAALLKFLNLASSPSSFSQFSLQELKPDTLMRLDAAAVHA 296
Query: 301 LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
L++L A ++ +++G++ R T G G+RLL W+KQPL+D +I RLDIV+ FV+
Sbjct: 297 LHLLPVNELAKED-TIYGILCRARTPG-GQRLLSEWIKQPLIDPAKIEERLDIVEFFVNS 354
Query: 361 TALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFS 419
+R L + L+R D+ + L +++ L + KLY L + S L Q G+ +
Sbjct: 355 NEVRHSLHEDFLRRFPDLHIMAKKLHQKKVRLSDLYKLYTIVRSLSPVLSTLPQ--GECA 412
Query: 420 SLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENG-EYMISSSYDTGLSALKNEQE 478
SL + + L+ +T D K++ ++E +D+++ E+ E+++ S+D L + +
Sbjct: 413 SL-DDLIVKSLQGMTKD--FEKYVEMIEQVIDIERAESKMEFLVMPSFDEALKEINDRIV 469
Query: 479 SLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLET 538
E+Q L + A L + K +KLD T G VFR++KKE +I+ + F + +
Sbjct: 470 DCEKQAEKLLTKAAQTLSVEKGKVIKLDYATDGGFVFRVSKKEYNRIKTQ--RAFDIADV 527
Query: 539 RKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDV 598
+ +GV F+N +L+ L +Y +YK Q+ LV+ ++ A +S+ LA +S+LD
Sbjct: 528 KNNGVSFSNGELRDLNSEYVAAKSDYKTMQETLVSDIVDVASGYSDPLYQLADNISQLDA 587
Query: 599 LLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWF 658
L+ A ++ Y RP I G+I LE RHP V A+ ++P+D + + F
Sbjct: 588 LVGLA--VAAVDGNYVRPKILQMSGGEIKLENVRHPIV-AKKQSQYVPSDAHFTKDERRF 644
Query: 659 QIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVST 718
QI+TGPNMGGKSTF+R V +++MAQ+GSFVPCD A+ISVRD I RVGAGD +RGVST
Sbjct: 645 QILTGPNMGGKSTFMRAVATSVVMAQIGSFVPCDEATISVRDAILTRVGAGDEIVRGVST 704
Query: 719 FMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHF 778
FM EMLETA I+K AT+ SLI+IDELGRGTSTYDG GLAWAI + E R+ +FATH+
Sbjct: 705 FMAEMLETAFIMKSATENSLIVIDELGRGTSTYDGLGLAWAISNEISTEQRSFCIFATHY 764
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HEL AL Q+ GV N HVSA + + ++ +LYKV PG C QSFG+ AE
Sbjct: 765 HELAAL---------EAQIPGVVNVHVSALAEDS--RIVLLYKVVPGPCSQSFGVQAAEL 813
Query: 839 ANFPESVVTLAREK 852
A P+SVV+ AR++
Sbjct: 814 AELPKSVVSEARQR 827
>gi|357626320|gb|EHJ76450.1| putative mutS-like protein 2 [Danaus plexippus]
Length = 877
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 310/903 (34%), Positives = 494/903 (54%), Gaps = 86/903 (9%)
Query: 68 LGTGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGS----NWRLVKSGTPGNLG 123
+G + L + +SK FE + R LLL R + +E++ GS +W L G+PG L
Sbjct: 1 MGIEPNKLDYLVLSKGNFEILIRKLLLVRR-YRVEIFVSEGSVKSCDWSLRYKGSPGYLS 59
Query: 124 SYEDV----LFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFT 179
E++ L + NE + V + + G +G+ V L ++EF DD FT
Sbjct: 60 QLEEIVGDGLGSANEQSTCLMAVNVKSDAISKGRLVGIACVYQNDYTLSVSEFTDDVDFT 119
Query: 180 NVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRL 239
+ES +V + EC+ A ++ K L+ + R V +T+ KK+EF T L+QDL+RL
Sbjct: 120 QLESIVVQVAPSECV---AAPADNDYKALKKVMDRASVTVTKVKKSEFTTEGLIQDLNRL 176
Query: 240 VRGSVEPVRDLVSGFE-----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLD 294
++ + +D +GF+ +A AL A + Y LL+D++N+G + I D Y++LD
Sbjct: 177 LKFKEDQQKD-ANGFQETKLPVAMSALAAAVRYTSLLNDDTNFGRFRISSVKAD-YLQLD 234
Query: 295 SAAMRALNVLESKTDANKN--FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
S+A+ ALNV D N + S++GL++R C GKRLL L+QPL D+N IN RLD
Sbjct: 235 SSALSALNVFPELGDTNTSPTRSIYGLLDR-CRTQHGKRLLCQLLRQPLRDINLINERLD 293
Query: 353 IVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
I+Q V + +R L + HL+R+ D++ L L +++AGLQ ++YQ+ R+P + L
Sbjct: 294 IIQLLVSSSQMRLQLHEDHLRRMPDLQALARRLARKKAGLQDCYRIYQAINRIPVLLKCL 353
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE--------------- 456
++ I +P+ L +D L KF ++ET++DL+ ++
Sbjct: 354 SEFN---DPTIHSVLCEPIAELNND--LEKFQQMIETTIDLEAVDRDRALNLHLGCKSQA 408
Query: 457 --------------NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
NG++++ S+D L L N+ E L+ + A DLD+ K
Sbjct: 409 LLELLSLQRWTRRPNGDFLVKPSFDEELQVLANDLEKLQNSAEKELNKAARDLDMEAGKT 468
Query: 503 LKLDKGTQFGHVFRI-TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
+KL+ Q G VFR E ++K L ++ +++ K GV+F N+ L + + Y +
Sbjct: 469 IKLENNPQHGFVFRYYILGVEGFLKKDL--KYTIVDAIKGGVRFRNSCLGDITENYLQAK 526
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
Y+ Q ++V +I A T+SE L+ ++S+LDVL+S + +AS+ + YTRP +
Sbjct: 527 AAYEKEQDKVVAEIINIASTYSECLYCLSNIISKLDVLVSLSVVASTSSSKYTRP-VLTT 585
Query: 622 DVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
+ D++L+ RHPC+E Q+ V++IPND L R S I+TG NMGGKST++R GV ++
Sbjct: 586 SIQDLVLKDVRHPCLELQEGVSYIPNDVVLERDSSLMHIVTGANMGGKSTWMRSCGVAVI 645
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
+A VGSFVP + A I + + AR+GA D + +G STFM EMLETA IL+ AT SL++I
Sbjct: 646 LAHVGSFVPAEYAKIPILRSLCARIGASDREEKGQSTFMLEMLETAGILRNATADSLVLI 705
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTSTY+G G+AWAI E L +EI+ LFATH+HELT LA + N++ + V
Sbjct: 706 DELGRGTSTYEGCGIAWAIAEKLSKEIQCFCLFATHYHELTRLASCGSRVVNSQALADVV 765
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP 861
+ +L +L++V G +S G+HVA+ A+ PE ++ A EK AELE
Sbjct: 766 D-----------GRLVLLHRVVQGPAAKSLGLHVAKIADLPEDILQFAEEKQAELE---- 810
Query: 862 SAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMK 921
+D ++E + + D S G A +FL + + + ++ + +K++K
Sbjct: 811 ----TDLCEVESEVRSE------DTSEGQAFIKEFLIKCKQIQEKNESDEKMMAEIKKLK 860
Query: 922 DDL 924
++
Sbjct: 861 QEM 863
>gi|301119939|ref|XP_002907697.1| DNA mismatch repair protein Msh2, putative [Phytophthora infestans
T30-4]
gi|262106209|gb|EEY64261.1| DNA mismatch repair protein Msh2, putative [Phytophthora infestans
T30-4]
Length = 816
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 315/808 (38%), Positives = 450/808 (55%), Gaps = 45/808 (5%)
Query: 133 NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE 192
NE V VA+ C G D + L L F D S N+ES LV L
Sbjct: 27 NEKHLKQVGVAVRRPRARTSCVKGQADEDTKQWELLLFSFSDSSELANLESLLVQLAPST 86
Query: 193 CLLPTEAVKS---SECKTLRDALTRCGVMLTERKKTEFKTRDLVQ-DLDRLVRGSVEPVR 248
C L E +S + K L L V KK F V+ ++ RL+ S
Sbjct: 87 CYLSAELEQSQGVGDSKKLHALLQTHEVAAVYMKKQLFYDVSGVETNVARLLGASTMAEY 146
Query: 249 DLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT 308
V +I G+L L+ +++D ++G Y +++ +L S M+LDSAA+ +LN+L +
Sbjct: 147 KDVLASKITAGSLACLIEALGVMTDAQSFGCYTLKEGNLSSAMQLDSAAVWSLNLLPEPS 206
Query: 309 DANKNFSLFG-----LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
FG ++NR T MG+RLL W++QPLLDV +I R +VQ FVDD++L
Sbjct: 207 STTTGVVSFGGSVLEILNRGKTP-MGRRLLERWIRQPLLDVKQIETRQSLVQLFVDDSSL 265
Query: 364 RQDL-RQHLKRISDIERLMHNLE-KRRAGLQQIVKLYQSSI-RLPYIRSALQQYEG---- 416
R +L + +K + D+ RL +LE K+ A + +V +Y +++ +P + L+ E
Sbjct: 266 RMELLDECMKALPDLGRLAISLERKKHAKITDLVSVYDAAVGAMPRVLKLLKATEAGGDN 325
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
++L+KE++ PLE + D L + LV+ VDLD ++++ +D L AL++E
Sbjct: 326 DLATLVKEKFATPLEKVLAD--LEGYTDLVKEVVDLDSRPT--LVVNAKHDENLQALRDE 381
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ + I H+ LD + +K +K G FR+ K+E KL+ I
Sbjct: 382 WDGILADIEEEHRNA---LD-TIGGDIKCEKDKVRGFAFRVVNKKEEARLSKLSYVHIC- 436
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
+ GV+FT TKLK L Y +V EY+ Q L++ I A T+ + ++ L+EL
Sbjct: 437 QVLVSGVQFTTTKLKALATDYHRVRGEYEERQSHLLSAAIDVASTYVPVLEAATATLAEL 496
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DVLL FA A + Y RP + D I+L +RHPCVE QD V+FIPND +R +S
Sbjct: 497 DVLLGFAHAACHAGSGYCRPTLEQ-DGECIVLTSARHPCVELQDGVDFIPNDYNFVRERS 555
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
FQ++TGPNMGGKST+IRQ+G +MAQ+GSFVP + A + V D + RVGAGD Q RGV
Sbjct: 556 RFQLVTGPNMGGKSTYIRQLGTIAVMAQIGSFVPAEVARLPVFDKLLVRVGAGDLQQRGV 615
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EMLE ++IL AT+RSL+IIDELGRGTSTYDGFGLAWAI E+L+ + R+ LFAT
Sbjct: 616 STFMLEMLEASAILHKATERSLVIIDELGRGTSTYDGFGLAWAISEYLLTKARSMCLFAT 675
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
HFHELTAL E+ + G AN HV+A ++ R++TM+Y+V G C QSFG+HVA
Sbjct: 676 HFHELTALKLEHPH--------GFANKHVTAV--ASDREITMVYQVRDGPCMQSFGVHVA 725
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR----ISDPNDMSRGAAR 892
A FP+SV+ AR K+ ELE F AV S + G+KR ++D S+
Sbjct: 726 SMAGFPKSVIECARLKSQELEGF-ERAVGSQET---TGAKRSAADALLTDSESPSKVFVS 781
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRM 920
FL F+ +PL+ M+ EA V+++
Sbjct: 782 EKGFLTAFAALPLDKMEPAEAFAAVRKL 809
>gi|255729080|ref|XP_002549465.1| hypothetical protein CTRG_03762 [Candida tropicalis MYA-3404]
gi|240132534|gb|EER32091.1| hypothetical protein CTRG_03762 [Candida tropicalis MYA-3404]
Length = 876
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 321/908 (35%), Positives = 484/908 (53%), Gaps = 86/908 (9%)
Query: 24 FYKTLPNDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVS 81
F + P D +RF +DY+T E+A ++A +Y T + + + G S+
Sbjct: 23 FSQLPPKDVPTIRFIHHTTQDYFTVLNEDAEYLADNFYKTRSVIEESRKGKRFAVSL--- 79
Query: 82 KNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQD--TP 139
+N E++ L + +ELY+ +++L+ SG+ GNL + + + E D
Sbjct: 80 QNFKESVK---LCVKNRIKIELYDNK--SFKLIGSGSAGNLEALSEEFGIDFEFDDGSNS 134
Query: 140 VIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEA 199
I A+ + G +G+ V+ + AEF D+ F+N+ES L+ LG KE L+P+
Sbjct: 135 SIAAI-----KLGKKVGVCVVE--NSTIYFAEFEDNDAFSNLESLLIQLGVKEALIPSNI 187
Query: 200 VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLV-RGSVE---PVRDLVSG-F 254
+ A+ + + K+ +D+ QDL++L+ +VE + L S F
Sbjct: 188 ----DNNKFLQAINKVNDLQIGAIKS--FPKDVEQDLEKLLDTDNVELTLASKGLNSSDF 241
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
++ GAL+ Y +LLS + I KY+L S+M+LDS+ ++ALNV +
Sbjct: 242 ALSLSCCGALIDYLDLLSSSKAFT---IEKYNLSSFMKLDSSTIKALNVFPAGNQKTVT- 297
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
S++ L C G +LL WLKQPL++++ I R +V+ +DDT+LR D++ L ++
Sbjct: 298 SIYELFK--CKTTAGSKLLSQWLKQPLIELSTIEERQKLVELMIDDTSLRVDVQDFLSKV 355
Query: 375 SDIERLMHNLEKRRAG-----LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
DI R++ + ++ G L +V LY LP + L + YL P
Sbjct: 356 PDIMRILKKIGSKKPGSDSKKLNDVVGLYNVVQLLPNL----------LDVLTVDYYLTP 405
Query: 430 LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
L+ L KF LVE S+ LD + + I ++ L L+N+ SL I+ +H
Sbjct: 406 LKQ--SAASLAKFCELVEVSIVLDVAQYEDNRIKPEFNPKLVELENQMSSLIDAINQIHL 463
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
DL++ V+K LKL+ +G R+T+ E IR K Q+ L+T+K GV FT T+
Sbjct: 464 NVGDDLNIDVNKKLKLENHQTYGWCLRLTRAESVVIRNK--RQYEQLQTQKMGVFFTTTE 521
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
LK+L +Y +Y Q + ++ +++ +F SLA L+ LDV+ + A S+
Sbjct: 522 LKRLSAEYSDARAQYDKEQSAITREILSLVLSYENVFGSLAGTLAHLDVIATLA--TSAM 579
Query: 610 PTPYTRPDINPPDVG-DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y +P ++P I LE SRHP +E QD +NFI ND + + F +ITGPNMGG
Sbjct: 580 LNSYVKPKLHPFGTDRKIKLEESRHPLLEVQDDINFISNDVSMDENR--FVVITGPNMGG 637
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
KST+IRQ+GV L+AQ+GSF+P + A + + D I +RVGAGD QL+G+STFM EMLET+
Sbjct: 638 KSTYIRQIGVVALLAQIGSFIPANEGAELPIFDAILSRVGAGDSQLKGLSTFMIEMLETS 697
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHE 787
SIL AT+ SLIIIDELGRGTSTYDGFGLAWAI HL+ + + +LFATHFHEL LA +
Sbjct: 698 SILATATENSLIIIDELGRGTSTYDGFGLAWAISGHLINDKKCFSLFATHFHELNNLAEK 757
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
+ V N HV A ++ +T++YKVEPG D+SFGIHVAE FP+ +V
Sbjct: 758 YPGK--------VQNLHVVAQ-ENEENDITLMYKVEPGISDKSFGIHVAELVKFPQKIVN 808
Query: 848 LAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMP-LE 906
+A+ KA EL + P K+ P + G R LK++ + L
Sbjct: 809 MAKRKAEELSEEPP---------------LKKKCSPEETKEGMDRLRTILKQWRENDNLS 853
Query: 907 TMDLKEAL 914
T LK AL
Sbjct: 854 TNSLKTAL 861
>gi|348689982|gb|EGZ29796.1| hypothetical protein PHYSODRAFT_261139 [Phytophthora sojae]
Length = 814
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 309/811 (38%), Positives = 446/811 (54%), Gaps = 37/811 (4%)
Query: 126 EDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESAL 185
E L NE V VA+ C G D + L L F D S N+ES L
Sbjct: 22 EVALQIRNEKHLKQVGVAVRRPRARASCVKGCAGEDTRQWELLLFSFSDSSELANLESLL 81
Query: 186 VALGCKECLLPTEAVKS---SECKTLRDALTRCGVMLTERKKTEFKTRDLVQ-DLDRLVR 241
V L C L E +S + K L L V KK F+ V+ ++ RL+
Sbjct: 82 VQLAPSTCYLSAELEQSQAVGDSKKLHALLQTHEVACVYMKKQLFQDVSGVETNVARLLG 141
Query: 242 GSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRAL 301
S V ++A G+L L+ +++D +G Y +++ +L S M+LDSAA+ +L
Sbjct: 142 ASTMAEYKDVLASKLAAGSLACLIDALGVMADADAFGCYTLQEGNLSSAMQLDSAAVWSL 201
Query: 302 NVLESKTDANKNFSLFG-----LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
N+L + + FG ++NR T MG+RLL W++QPLLDVN+I R +VQ
Sbjct: 202 NLLPEPSATTAGATRFGGSVLEILNRGKTP-MGRRLLERWIRQPLLDVNQIETRQSLVQL 260
Query: 357 FVDDTALRQDL-RQHLKRISDIERLMHNLE-KRRAGLQQIVKLYQSSI-RLPYIRSALQQ 413
FVDD++LR +L + +K + D+ RL +LE K+ A + +V +Y +++ +P ++ L++
Sbjct: 261 FVDDSSLRMELLDECMKALPDLGRLAVSLERKKHAKITDLVSVYDAAVGAIPRVQKLLKE 320
Query: 414 YEG----QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
+SL+KE++ PLE + D L + LV+ VDLD N ++++ +D
Sbjct: 321 TTAGGDEALASLVKEKFAAPLEKVLAD--LQGYTELVKEVVDLDSRPN--LVVNAKHDKD 376
Query: 470 LSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL 529
L AL+ E + + I H+ LD + +K +K G FR+ K+E KL
Sbjct: 377 LQALREEWDGILADIEDEHRNA---LD-TIGGEIKCEKDKVRGFAFRVVNKKEESRLSKL 432
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
I + GV+FT TKLK L Y++V EY+ Q ++N I A T+ + ++
Sbjct: 433 PYVHIC-QVLVSGVQFTTTKLKALAADYRRVRGEYEERQAHVLNAAIDVASTYVPVLEAA 491
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
+ L+ELDVLL FA A + Y RP + D I+L +RHPCVE QD V+FIPND
Sbjct: 492 TSTLAELDVLLGFAHAACHAGSGYCRPTLEQ-DGDCIVLTSARHPCVELQDSVDFIPNDY 550
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
R KS FQ++TGPNMGGKST+IRQ+G +MAQ+GSFVP + A + V D + RVGAG
Sbjct: 551 NFEREKSRFQLVTGPNMGGKSTYIRQLGTIAVMAQIGSFVPAEVARLPVFDKLLVRVGAG 610
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D Q RGVSTFM EMLE ++IL AT+RSL+IIDELGRGTSTYDGFGLAWAI E+L+ + R
Sbjct: 611 DLQQRGVSTFMLEMLEASAILHKATERSLVIIDELGRGTSTYDGFGLAWAISEYLLSKAR 670
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQ 829
+ LFATHFHELTAL E+ G AN HV+A ++ R++TM+Y+V G C +
Sbjct: 671 SMCLFATHFHELTALKQEHPQ--------GFANKHVTAV--ASDREITMVYQVRDGPCME 720
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG 889
SFG+HVA A FP SV+ AR K+ ELE F + + + + ++
Sbjct: 721 SFGVHVASMAGFPASVIECARRKSQELEGFERAVGSQGTSSKRSAADASLPENGQSPTKK 780
Query: 890 AARAHQFLKEFSDMPLETMDLKEALERVKRM 920
A FL F +PL+ + + + V+++
Sbjct: 781 TALTKVFLSSFVALPLDKLAPAKVIAAVRKL 811
>gi|325192358|emb|CCA26800.1| AlNc14C417G11489 [Albugo laibachii Nc14]
Length = 778
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 294/766 (38%), Positives = 438/766 (57%), Gaps = 51/766 (6%)
Query: 167 LGLAEFLDDSHFTNVESALVALGCKECLLPTEA----VKSSECKTLRDALTRCGVMLTER 222
L L F D TN+E+ V L +C LP + + K L + V +
Sbjct: 50 LLLYAFSDTVALTNLETLFVQLCPTKCYLPIDLNIANASDRDSKKLHAITSAHQVETSHV 109
Query: 223 KKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYI 282
KK F ++D+ +L L+ + +IA G+L L+ +L+++ S +G Y +
Sbjct: 110 KKHSFSSKDIESNLKHLLGVTSLATYKTELDMDIAIGSLSCLIDSMKLMTEVSVFGCYVL 169
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
S+ S M+LD +A+ +LN+L N S+ ++NR T+ +G+RLL W++QPLL
Sbjct: 170 GSCSISSAMQLDGSAIWSLNLLPISGSKQSNGSVLEILNRGKTS-IGRRLLEQWIRQPLL 228
Query: 343 DVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLE-KRRAGLQQIVKLYQ- 399
I R +IVQ FVD+ +LR +L + ++ I D++RL LE K++ ++ ++ +Y
Sbjct: 229 QYEAITERQEIVQTFVDNPSLRIELLEESMRAIPDLDRLCTKLERKKKVKIEHLISVYDV 288
Query: 400 SSIRLPYIRSALQQYEGQFSS----LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQL 455
S + LP + + L ++ + ERY++PLE++ D L ++ LVE VDLD
Sbjct: 289 SKVVLPQLITTLNTNVQLMATDNVRHLTERYINPLETIQSD--LKGYLNLVEEVVDLDT- 345
Query: 456 ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
++I++ +D L+ ++ E + L +I H++ + +K +K G VF
Sbjct: 346 -RPTFIINAKHDPELARIREEWDQLTLEIEQEHQKARET----IGGDIKCEKDKTRGFVF 400
Query: 516 RI-TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
RI KKEE +I K + + +GV FT TKLK L +Y++V EY+ Q ++
Sbjct: 401 RIINKKEEARISKLPYVH--ICQVLVNGVHFTTTKLKALATEYKRVQMEYEKRQAHVLEA 458
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
++ A T+ + + +L+ELD LL FA A + + Y RP I D I L +RHP
Sbjct: 459 AVEVASTYVPVLERTTFLLAELDCLLGFAHAACNAGSGYCRP-IMSRDTECIQLINARHP 517
Query: 635 CVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
CVE QD V+FIPN+ L R KS FQIITGPNMGGKST+IRQ+G +MAQVGSFVP D A
Sbjct: 518 CVELQDDVDFIPNNFDLARNKSHFQIITGPNMGGKSTYIRQLGTIAVMAQVGSFVPADAA 577
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+ + D + RVGAGD Q +GVSTFM EMLE +SIL AT+RSL+IIDELGRGTSTYDGF
Sbjct: 578 QLPIFDKLLVRVGAGDSQQQGVSTFMMEMLEASSILHNATERSLVIIDELGRGTSTYDGF 637
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
GLAWAI E+L+ RA TLFATHFHELTAL+ E N G N H SA +
Sbjct: 638 GLAWAISEYLITNTRAMTLFATHFHELTALSDEYPN--------GTVNRHTSAF--AAKE 687
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVG 874
+TM+Y+++ G C +SFG+HVAE A FP V+ A+ K+ +LE + +
Sbjct: 688 NVTMMYQIKKGPCMESFGVHVAELAGFPSDVIKSAKRKSQQLE-YAEHTI---------- 736
Query: 875 SKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRM 920
SK K ++ N R+++F+++F+ +P++TM ++AL+ VK +
Sbjct: 737 SKTKSLTCKNQ------RSNEFVQQFAALPMDTMSPQDALQAVKEL 776
>gi|241955156|ref|XP_002420299.1| DNA mismatch repair protein MSH2, putative [Candida dubliniensis
CD36]
gi|223643640|emb|CAX42523.1| DNA mismatch repair protein MSH2, putative [Candida dubliniensis
CD36]
Length = 873
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 322/923 (34%), Positives = 499/923 (54%), Gaps = 94/923 (10%)
Query: 14 DAKQARGFLSFYKTLP-NDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTALRQLGT 70
D R + Y LP ++ +RF D DY+TA G +A IA+ Y T + ++
Sbjct: 12 DLADERSYFKKYAQLPPKESTTIRFIDHNNHDYFTALGSDADLIAEKIYRTQSVIKH--- 68
Query: 71 GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLF 130
+ V++S F+ L + +E+Y ++L+ SGT GNL S +
Sbjct: 69 -HNQTKYVTISPQNFKESLNYCL--QNHLKVEVYHSK--TFQLISSGTAGNLDSLSEEFD 123
Query: 131 ANNEMQD--TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVAL 188
+ + +D + I A+ + C I ++ L+EF D+ ++N+ES L+ L
Sbjct: 124 IDFDFKDGSSSSIAAIKLGSKVGVCVIA-------DSIVHLSEFEDNELYSNLESLLIQL 176
Query: 189 GCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVR 248
G KE ++P + K L + ++ K+ +D QD+ +L+ +
Sbjct: 177 GVKEVVIPANV----DNKKFFQMLEKINDLVVSAAKS--FPKDNEQDISKLLDTENLELT 230
Query: 249 DLVSG-----FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
G + A GAL++Y +LL+ + + I KY+L ++M+LDS+ M+ALN+
Sbjct: 231 LAAKGINSLDYSSALSCCGALIAYLDLLNGDKTFE---INKYNLSTFMKLDSSTMKALNI 287
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
L + T S+F L C G RLL WLKQPL+D+ I R ++V++ +DDT+L
Sbjct: 288 LPNGTQRAIT-SIFELFK--CKTLAGSRLLAQWLKQPLIDLPLIEERQELVKSMIDDTSL 344
Query: 364 RQDLRQHLKRISDIERLMH--NLEKRRAG-----LQQIVKLYQSSIRLPYIRSALQQYEG 416
R + ++ L ++ DI RL+ +L +R+G L ++V LYQ LP + L
Sbjct: 345 RVETQEFLSKVPDINRLLKKVSLGVKRSGAENKKLNEVVNLYQLVSLLPNLTEILTV--- 401
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
+ Y PL+ D+ L+KF LVET++DLD + +Y I +D LS + N
Sbjct: 402 -------DYYAKPLKK--DEQALSKFCELVETTIDLDTSFDKDYKIKPDFDPSLSEISNT 452
Query: 477 QESLERQIHSLHKQTASDLDL-PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
E+ + I+ L+ + DL+L LKL++ G R+T+ + +R K +Q+
Sbjct: 453 MEAAFKAINDLYLEAGDDLNLDTASNKLKLEQHQTHGWCMRVTRNDSRVLRGK--SQYKE 510
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
L+T K GV FT ++K+L +Y K +EY Q E++ ++ +T+ + +SL++ L+
Sbjct: 511 LQTVKSGVFFTTIEMKRLSQEYAKAYDEYNVKQSEVIKEILSLTLTYEPVLQSLSSTLAH 570
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVG-DIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDV+ SFA ++ YT+P + P + I L SRHP +E QD VNFI ND K+ G
Sbjct: 571 LDVITSFA--TTAMLNSYTQPKLFPFESARKINLIESRHPLLEVQDDVNFISNDVKM--G 626
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR-ASISVRDCIFARVGAGDCQL 713
F IITGPNMGGKST+IRQ+G LMAQVGSFVP + A + + D I +RVGAGD QL
Sbjct: 627 DKHFAIITGPNMGGKSTYIRQIGTIALMAQVGSFVPANEGAELPIFDAILSRVGAGDSQL 686
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EMLET+SIL AT SLIIIDELGRGTSTYDGFGLAWAI E L++ + +
Sbjct: 687 KGLSTFMIEMLETSSILATATANSLIIIDELGRGTSTYDGFGLAWAISEELIKR-KCFAV 745
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHEL+ L +++ GV N ++ A + T+ +T++YKV PG + SFGI
Sbjct: 746 FATHFHELSQL---------SEKYDGVENLNLMA--EQTNEDITLIYKVGPGISNTSFGI 794
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
VAE + PE ++ +A+ K EL + P +K+ S+ ++ G +R
Sbjct: 795 SVAEKLHMPEKIINMAKRKVEELSEEPPI--------------KKQCSEI-EIREGMSRL 839
Query: 894 HQFLKEFSDMPLETMDLKEALER 916
+ LKE+ + P +++ E+L +
Sbjct: 840 REILKEWRNNP--EINIAESLSK 860
>gi|68481114|ref|XP_715472.1| hypothetical protein CaO19.10605 [Candida albicans SC5314]
gi|68481255|ref|XP_715402.1| hypothetical protein CaO19.3093 [Candida albicans SC5314]
gi|46437024|gb|EAK96377.1| hypothetical protein CaO19.3093 [Candida albicans SC5314]
gi|46437096|gb|EAK96448.1| hypothetical protein CaO19.10605 [Candida albicans SC5314]
Length = 873
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 320/911 (35%), Positives = 491/911 (53%), Gaps = 92/911 (10%)
Query: 14 DAKQARGFLSFYKTLP-NDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTALRQLGT 70
D R + Y LP ++ +RF D DY+TA G +A IA+ Y T + ++
Sbjct: 12 DLADERSYFKKYSQLPPKESTTIRFIDHNNHDYFTALGSDADLIAEKIYRTQSVIKH--- 68
Query: 71 GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLF 130
+ V++S F+ L + +E+Y ++L+ SGT GNL S +
Sbjct: 69 -HNQTKYVTISPQNFKESLNYCL--QNHFKVEVYHSK--TFQLISSGTAGNLDSLSEEFD 123
Query: 131 ANNEMQD--TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVAL 188
+ + +D + I A+ + C I ++ L+EF D+ ++N+ES L+ L
Sbjct: 124 IDFDFRDGSSSSIAAIKLGNKVGVCVIA-------DSIVHLSEFEDNELYSNLESLLIQL 176
Query: 189 GCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVR 248
G KE ++P + K L + ++ K+ +D QD+ +L+ +
Sbjct: 177 GVKEVVIPANV----DNKKFFQMLEKLNDLVVSAAKS--FPKDNEQDISKLLDTENLELS 230
Query: 249 DLVSG-----FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
G + +A GAL+ Y +LL+ + + I KY+L ++M+LDS+ M+ALN+
Sbjct: 231 LAAKGINSLDYALALSCCGALIDYLDLLNGDKTFE---INKYNLSTFMKLDSSTMKALNI 287
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
L + T S+F L C G RLL WLKQPL+D++ I R ++V+A +DDT+L
Sbjct: 288 LPNGTQKAIT-SIFELFK--CKTLGGSRLLSQWLKQPLIDLSLIEERQELVKAMIDDTSL 344
Query: 364 RQDLRQHLKRISDIERLMHN--LEKRRAG-----LQQIVKLYQSSIRLPYIRSALQQYEG 416
R ++++ L ++ DI RL+ L +R+G L ++V LYQ LP + L
Sbjct: 345 RVEIQEFLSKVPDINRLLKKIGLGVKRSGAENKKLNEVVNLYQLVSLLPNLTEILTI--- 401
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
+ Y PL+ D+ L+KF LVET++DLD + +Y I +D LS + N
Sbjct: 402 -------DYYAKPLKK--DEQALSKFCELVETTIDLDTSFDKDYKIKPDFDPSLSEISNN 452
Query: 477 QESLERQIHSLHKQTASDLDL-PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
ES + I+ L+ + DL+L LKL++ G R+T+ + +R K +Q+
Sbjct: 453 MESAFKAINDLYLEAGDDLNLDTASNKLKLEQHQTHGWCMRVTRNDSRVLRGK--SQYKE 510
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
L+T K GV FT ++K+L +Y K +EY Q E++ ++ +T+ + +SL++ L+
Sbjct: 511 LQTVKSGVFFTTIEMKRLSQEYTKAYDEYNVKQSEVIKEILSLTLTYEPVLQSLSSTLAH 570
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVG-DIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDV+ FA ++ YT+P + P + I L SRHP +E QD +NFI ND K+
Sbjct: 571 LDVITCFA--TTAMLNSYTQPKLFPFESSRKINLIESRHPLLEVQDDINFISNDVKM--D 626
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC-DRASISVRDCIFARVGAGDCQL 713
F IITGPNMGGKST+IRQ+G LMAQVGSF+P D A + + D I +RVGAGD QL
Sbjct: 627 DKHFAIITGPNMGGKSTYIRQIGTIALMAQVGSFIPANDGAELPIFDAILSRVGAGDSQL 686
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EMLET+SIL AT SLIIIDELGRGTSTYDGFGLAWAI E L++ + +
Sbjct: 687 KGLSTFMIEMLETSSILATATANSLIIIDELGRGTSTYDGFGLAWAISEELIKR-KCFAV 745
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHEL+ L+ ++ GV N ++ A + T+ +T++YKV PG + SFGI
Sbjct: 746 FATHFHELSQLS---------EKYDGVENLNLMA--EQTNEDITLIYKVGPGISNTSFGI 794
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
VAE + PE +V +A+ K EL + P +K+ S+ ++ G +R
Sbjct: 795 SVAEKLHMPEKIVNMAKRKVEELSEEPPI--------------KKQCSE-TEVREGMSRL 839
Query: 894 HQFLKEFSDMP 904
+ LKE+ + P
Sbjct: 840 REILKEWRNNP 850
>gi|238881184|gb|EEQ44822.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 873
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 320/911 (35%), Positives = 491/911 (53%), Gaps = 92/911 (10%)
Query: 14 DAKQARGFLSFYKTLP-NDTRAVRFFDR--RDYYTAHGENATFIAKTYYHTTTALRQLGT 70
D R + Y LP ++ +RF D DY+TA G +A IA+ Y T + ++
Sbjct: 12 DLADERSYFKKYSQLPPKESTTIRFIDHNNHDYFTALGSDADLIAEKIYRTQSVIKH--- 68
Query: 71 GSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLF 130
+ V++S F+ L + +E+Y ++L+ SGT GNL S +
Sbjct: 69 -HNQTKYVNISPQNFKESLNYCL--QNHFKVEVYHSK--TFQLISSGTAGNLDSLSEEFD 123
Query: 131 ANNEMQD--TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVAL 188
+ + +D + I A+ + C I ++ L+EF D+ ++N+ES L+ L
Sbjct: 124 IDFDFRDGSSSSIAAIKLGNKVGVCVIA-------DSIVHLSEFEDNELYSNLESLLIQL 176
Query: 189 GCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVR 248
G KE ++P + K L + ++ K+ +D QD+ +L+ +
Sbjct: 177 GVKEVVIPANV----DNKKFFQMLEKLNDLVVSAAKS--FPKDNEQDISKLLDTENLELS 230
Query: 249 DLVSG-----FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
G + +A GAL+ Y +LL+ + + I KY+L ++M+LDS+ M+ALN+
Sbjct: 231 LAAKGINSLDYALALSCCGALIDYLDLLNGDKTFE---INKYNLSTFMKLDSSTMKALNI 287
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
L + T S+F L C G RLL WLKQPL+D++ I R ++V+A +DDT+L
Sbjct: 288 LPNGTQKAIT-SIFELFK--CKTLGGSRLLSQWLKQPLIDLSLIEERQELVKAMIDDTSL 344
Query: 364 RQDLRQHLKRISDIERLMHN--LEKRRAG-----LQQIVKLYQSSIRLPYIRSALQQYEG 416
R ++++ L ++ DI RL+ L +R+G L ++V LYQ LP + L
Sbjct: 345 RVEIQEFLSKVPDINRLLKKIGLGVKRSGAENKKLNEVVNLYQLVSLLPNLTEILTI--- 401
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNE 476
+ Y PL+ D+ L+KF LVET++DLD + +Y I +D LS + N
Sbjct: 402 -------DYYAKPLKK--DEQALSKFCELVETTIDLDTSFDKDYKIKPDFDPSLSEISNN 452
Query: 477 QESLERQIHSLHKQTASDLDL-PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
ES + I+ L+ + DL+L LKL++ G R+T+ + +R K +Q+
Sbjct: 453 MESAFKAINDLYLEAGDDLNLDTASNKLKLEQHQTHGWCMRVTRNDSRVLRGK--SQYKE 510
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
L+T K GV FT ++K+L +Y K +EY Q E++ ++ +T+ + +SL++ L+
Sbjct: 511 LQTVKSGVFFTTIEMKRLSQEYTKAYDEYNVKQSEVIKEILSLTLTYEPVLQSLSSTLAH 570
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVG-DIILEGSRHPCVEAQDWVNFIPNDCKLIRG 654
LDV+ FA ++ YT+P + P + I L SRHP +E QD +NFI ND K+
Sbjct: 571 LDVITCFA--TTAMLNSYTQPKLFPFESSRKINLIESRHPLLEVQDDINFISNDVKM--D 626
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC-DRASISVRDCIFARVGAGDCQL 713
F IITGPNMGGKST+IRQ+G LMAQVGSF+P D A + + D I +RVGAGD QL
Sbjct: 627 DKHFAIITGPNMGGKSTYIRQIGTIALMAQVGSFIPANDGAELPIFDAILSRVGAGDSQL 686
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
+G+STFM EMLET+SIL AT SLIIIDELGRGTSTYDGFGLAWAI E L++ + +
Sbjct: 687 KGLSTFMIEMLETSSILATATANSLIIIDELGRGTSTYDGFGLAWAISEELIKR-KCFAV 745
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHEL+ L+ ++ GV N ++ A + T+ +T++YKV PG + SFGI
Sbjct: 746 FATHFHELSQLS---------EKYDGVENLNLMA--EQTNEDITLIYKVGPGISNTSFGI 794
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA 893
VAE + PE +V +A+ K EL + P +K+ S+ ++ G +R
Sbjct: 795 SVAEKLHMPEKIVNMAKRKVEELSEEPPI--------------KKQCSE-TEVREGMSRL 839
Query: 894 HQFLKEFSDMP 904
+ LKE+ + P
Sbjct: 840 REILKEWRNNP 850
>gi|290999727|ref|XP_002682431.1| DNA mismatch repair protein muts [Naegleria gruberi]
gi|284096058|gb|EFC49687.1| DNA mismatch repair protein muts [Naegleria gruberi]
Length = 909
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 317/898 (35%), Positives = 481/898 (53%), Gaps = 67/898 (7%)
Query: 44 YTAHGENATFI----AKTYY-----------HTTTALRQLGTGSDALSSVSVSKNMFETI 88
Y HG +A FI KT Y T + G + L +++ ++ F
Sbjct: 36 YDVHGHDAWFIDRHFCKTGYFKLFTHKGVIDRTNPYKTEDGKKYNGLPFITLKQSHFHQY 95
Query: 89 ARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNF 148
R LLL +H + S + +KS +PGNL +E++L N+ Q T V+ A++
Sbjct: 96 VRGLLL---NHGKRVEIWSEDKYECLKSASPGNLQEFEELL--ENDSQ-TGVVCAIYIKK 149
Query: 149 RENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTL 208
N IGL + D T R +G F D N++S L + KE L+ + + + L
Sbjct: 150 ELNERKIGLAFADTTLRTIGFCSFTDSDQLANLDSTLSQIETKEALVFYQK-NDPDSERL 208
Query: 209 RDALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSY 267
+D L R ++ TERKK++F K L D+ RL E V +L E + ALL Y
Sbjct: 209 KDVLRRSNILETERKKSDFVKKSTLEADICRLT--GEERVMNLEFNEEHVANSTQALLDY 266
Query: 268 AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAG 327
ELL D +NY +Y + + +M+LDS + +LN+L D +KN SLFGL+N+ C
Sbjct: 267 LELLDDINNYSHYKTKSQQISLFMKLDSTCVSSLNILPPPNDRSKNTSLFGLLNQ-CVTR 325
Query: 328 MGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKR 387
G RLL W++QPL +EI RLD+VQ F ++ LR+++++ LK++ D+++++ + K+
Sbjct: 326 PGARLLREWIRQPLTSHSEIEKRLDMVQIFAEENELREEIKELLKKVPDLDKILIRVVKQ 385
Query: 388 RAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH--LNKFIAL 445
R ++ IVKLY ++P ++ + + + S + Y+D + L D ++ L F+ +
Sbjct: 386 RVTIEDIVKLYICVQQVPAVKEVMNRVRNEKSFVKDNLYMDLMVHL-DSNYADLQSFLQM 444
Query: 446 VETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKL 505
V + +D++ E EY I+ D L L N+ + Q K +DL++ L L
Sbjct: 445 VISIIDMEATEKHEYRINCKIDAELEKLMNDLNEIISQCDEECKSVENDLNV---NELFL 501
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
+ T+ F++ K + + I +++ D VKFTN LK+L Y +LE+Y+
Sbjct: 502 EM-TKKSVCFKVKKAQANALTGATNYTLIGPQSKSD-VKFTNDTLKELAKSYIDILEQYE 559
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +E + ++ + TF+ F L L+ +D+ +SFA ++ + PYTRP I P D +
Sbjct: 560 SKSQETLQKIREVVTTFAPAFTQLRETLASIDIFISFASVSVNAAIPYTRPIIRPIDYEE 619
Query: 626 --IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
IIL RHP VE QD V+F N C L R + +ITGPNMGGKSTFIRQV +N++MA
Sbjct: 620 EEIILYDCRHPVVEIQDSVDFKENTCILDRSQHQLHLITGPNMGGKSTFIRQVAINVIMA 679
Query: 684 QVGSFVPCDRASI-SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
Q+G F+P SI +VRD I +RVGA D RG+STFM EMLETA++L AT +SLII+D
Sbjct: 680 QIGCFIPAREGSIVTVRDAILSRVGASDSTQRGISTFMAEMLETAALLSTATSKSLIIVD 739
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
ELGRGTSTYDGFGLA+AI EHL++ A TLFATHFHEL AL ++ + N
Sbjct: 740 ELGRGTSTYDGFGLAYAIIEHLMDSTNAFTLFATHFHELRAL---------IEKFPAICN 790
Query: 803 YHVSAHIDSTSRKLTMLYKV----EPGACD--QSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + I +L MLY++ E + SFGI VA+ A+FP V+ +A KA E+
Sbjct: 791 ERMDSKI--IDNRLVMLYQIVTDNEEAITENSNSFGIEVAKLADFPIDVIRVAESKAEEI 848
Query: 857 EDF--TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKE 912
+ T I + + EV ++R A+ H L +F + L+E
Sbjct: 849 KQLMNTTQLQILEPSTKEVADSQRR-----------AKIHSALSKFYNFNFSDRTLQE 895
>gi|430812726|emb|CCJ29847.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 711
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 267/652 (40%), Positives = 396/652 (60%), Gaps = 31/652 (4%)
Query: 149 RENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLP-TEAVKSSECKT 207
+EN +G+ ++D + LG+ EF+D+ + N E LV L KE ++P E K+ E
Sbjct: 10 KENQHFVGIAFLDGLTKKLGVTEFIDNELYNNFEFLLVQLNTKEVIIPLNEENKNLELSK 69
Query: 208 LRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFE--IAPGALGALL 265
++ G+++TE + +FK +L D E L+S E IA ++ AL+
Sbjct: 70 VKTVSENAGMIVTEISEQDFKIDNLNYDFPCFFN---EESLKLLSHIESKIAKSSIAALI 126
Query: 266 SYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT-DANKNFSLFGLMNRTC 324
Y ++ ++ + KY+L YM+LD A++AL++ T ++NK+ SLFGL+NR C
Sbjct: 127 KYLLYTNNLTDSEKLQLYKYNLSQYMKLDIPALKALSLFPDPTFESNKSMSLFGLLNR-C 185
Query: 325 TAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNL 384
+G RLL W+KQPL+D+ EIN R +V+AF + Q +++ LK D+ +L
Sbjct: 186 KTAIGSRLLSQWIKQPLMDLIEINKRQLLVEAFSKNLHALQSVQEFLKSFPDVYKLNRKF 245
Query: 385 EKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLTDDDHLNKFI 443
+K++A L+++V++YQ I++P + +AL+ + +S LI+E YL L+ + +L K+I
Sbjct: 246 QKKKATLEEVVRVYQMIIKIPDLINALEGVNDHNYSVLIQELYLSKLKEF--NGNLKKYI 303
Query: 444 ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKAL 503
L+ET++D + + N E++I S +D L+ L NE L+ +I+ H + +L K L
Sbjct: 304 KLIETTIDFEAMSNHEWIIKSEFDESLTRLLNELNELKDKIYQEHLRVGEELQQDTMKKL 363
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
KL++ G R+T+ IR K +I L T K GV FT +++ +Y +L +
Sbjct: 364 KLEQSEIHGWCLRLTRSHAYSIRDK---NYIELSTLKSGVYFTTLMMRQYSKEYNDILAQ 420
Query: 564 YKNCQKELVNRVIQTA---------------VTFSEIFKSLATMLSELDVLLSFADLASS 608
YK+ Q EL V++ A +F I + L ++ LDV++SF+DL+SS
Sbjct: 421 YKHQQTELAKEVVEIAGILIYYFRFKSMVILASFCPIMEELGMVIGHLDVIISFSDLSSS 480
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
PY RP I+ IIL+ SRHPC+E Q + FI ND L RG S F IITGPNMGG
Sbjct: 481 SVLPYVRPIISKD--SKIILKESRHPCLEIQTDITFISNDVYLERGVSEFLIITGPNMGG 538
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST+IRQ+G+ +LMAQ+G FVPC++A IS+ DCI ARVGA D QL+G+STFM EMLETA+
Sbjct: 539 KSTYIRQIGIIVLMAQIGCFVPCEKAEISIFDCILARVGANDTQLKGISTFMAEMLETAT 598
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
IL+ A+ SLIIIDELGRGTST DGFGLAWAI E+L+ +I A +LFATHFHE
Sbjct: 599 ILETASSNSLIIIDELGRGTSTADGFGLAWAISEYLISKINAFSLFATHFHE 650
>gi|149234545|ref|XP_001523152.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453261|gb|EDK47517.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 968
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 328/964 (34%), Positives = 498/964 (51%), Gaps = 120/964 (12%)
Query: 35 VRFFDR-RDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLL 93
+RF D ++YY+ +A IA Y T + L+ + ++ +++S +F R L
Sbjct: 30 IRFIDHNKEYYSCLDSDAELIADEIYKTRSVLKT----QNGVTYITMSTQVFFNALRLTL 85
Query: 94 LERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQD--TPVIVALFPNFREN 151
LE+ +E+Y + + L+ GT GNL + + E +D P I A+ +
Sbjct: 86 LEK-QLRVEVY--NSRTYELICKGTAGNLDALVLEYGVDFEFRDCSNPSIAAV----KIV 138
Query: 152 GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDA 211
G + +G + + ++ L EF D+ +N+E LV G KE ++P K L
Sbjct: 139 GESNKVGVCLIEEDIIRLCEFEDNDLLSNLEGLLVQFGVKEVVVPNLGEKR-----LMLV 193
Query: 212 LTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSG------------------ 253
+ + ++ T+F T+ + QDL +L+ E G
Sbjct: 194 INKISNIVVS-TSTQFNTKYIEQDLVKLLAHGDEAGEAGEVGNDAISNNDNNSSNNNNNN 252
Query: 254 -FEIAPGALG--------------ALLSYAELLSDESNYGN---YYIRKYSLDSYMRLDS 295
E+A A G AL+SY LL ++++ Y++ KY L S+M+LDS
Sbjct: 253 NLEMAFSAKGIKMTEHPISLSCCNALISYLGLLEEQTDLSTSRAYHLEKYDLLSFMKLDS 312
Query: 296 AAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQ 355
+ ++ALNV + S+F L+N+ TAG G RLL WLKQPL V+EI R +V
Sbjct: 313 STLKALNVFPEFKSTTIS-SIFELLNKCKTAG-GSRLLSQWLKQPLTLVDEIEERQTLVA 370
Query: 356 AFVDDTALRQDLRQHLKRISDIERLMHNLE-------KRRAGLQQIVKLYQSSIRLPYIR 408
++D+ LR ++ L +I DI+RL+ L L+ +V+LYQ + LP +
Sbjct: 371 LLINDSTLRVSIQNALTQIPDIKRLLKKLTIAMMKNGNENKKLEDLVRLYQIVLVLPELI 430
Query: 409 SALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLEN--GEYMISSSY 466
AL + ++ + +L+P++ L L KF L+ET+VDL L + + I +
Sbjct: 431 EALTDKD----KIVDKFWLEPIKKLYS--ALLKFQELIETTVDLKGLHDLHSNFDIRPEF 484
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
D L + ++ +I LH A DL++ VDK LKL+ G+ R+T+ + +R
Sbjct: 485 DASLVEINEKKTEAMDRIKQLHLDAADDLNMDVDKKLKLEMHQIHGYCMRLTRNDSVVLR 544
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
++I ++T K GV FT ++ +K Y EEY + Q+EL+ VI ++T+ +F
Sbjct: 545 N--NRKYIEIQTVKAGVYFTTSEFRKQAQVYTHSCEEYNHKQRELIREVISISLTYLSVF 602
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD--IILEGSRHPCVEAQDWVNF 644
L+ LS LDV+ SFA+ A PT Y RP + P D + ++ SRHP +E Q+ V F
Sbjct: 603 TKLSLDLSHLDVINSFANAALLAPTTYVRPKMIPLDSEKRVVNVKNSRHPLLEVQEDVEF 662
Query: 645 IPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD------------ 692
IPND + G +F IITGPNMGGKST+++Q+ LMAQVGSF+P D
Sbjct: 663 IPNDISI--GSKFFNIITGPNMGGKSTYLKQIATLALMAQVGSFIPADDLREEEEEEEKE 720
Query: 693 ----------------RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
++ V D I +RVGAGD QL+G+STFM EMLET+SIL AT
Sbjct: 721 EAAAAAAAKSGENKNGAPTLPVFDAILSRVGAGDSQLKGLSTFMIEMLETSSILATATRN 780
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLIIIDELGRGTSTYDGFGLAW+I +HL++ + TLFATHFHEL LA K
Sbjct: 781 SLIIIDELGRGTSTYDGFGLAWSISDHLIQVKKCITLFATHFHELNQLAK--------KY 832
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ V N HV A++++ +T++YK+EPG ++SFGI+VAE NFPE ++ +A+ KA EL
Sbjct: 833 PLEVENLHVVAYVENQD-DITLMYKIEPGVSNKSFGINVAEMVNFPEKIIKMAKRKAEEL 891
Query: 857 EDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLET----MDLKE 912
ED + + G+ +K + +++ + LKE+ L +LK
Sbjct: 892 EDMKGDGNGNVSGNEDGGNGKKLRGNRDELWLEVENLKKVLKEWRGKDLNAEEAPAELKR 951
Query: 913 ALER 916
LER
Sbjct: 952 LLER 955
>gi|431912703|gb|ELK14721.1| DNA mismatch repair protein Msh2 [Pteropus alecto]
Length = 672
Score = 461 bits (1185), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/666 (37%), Positives = 399/666 (59%), Gaps = 22/666 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAH E+A A+ + T ++ +G
Sbjct: 9 LQLESAAEFGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKTQGVVKYIG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKTLESVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKAFKENDWYLAFKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD ++ LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQKKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERK+ +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPA-GETTGDMGKLRQVIQRGGILITERKRADFSTKDVYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E V +V ++A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQVNSVVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RA N+ + S D + + SL L+N+ C G+RL++ W+KQPL+D + I RL++V+A
Sbjct: 307 VRACNLFQGSVEDTSGSQSLTALLNK-CKTPQGQRLVNQWIKQPLMDKSRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ L++ L +R D+ RL +++ A LQ +LYQ +LP + SAL +YE
Sbjct: 366 FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPSVISALGKYE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ +L+ ++ P L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQTLLLAVFVTPFVDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
+ LE+++ S TA DL L K +KLD +QFG+ FR+T KEE +R F
Sbjct: 484 IMDDLEKKMQSTLISTARDLGLDSGKQIKLDSNSQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
++ +K+GVKFTN+ L L ++Y K EY+ Q +V ++ + + E ++L +L++
Sbjct: 542 VDIQKNGVKFTNSTLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQ 601
Query: 596 LDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
LD ++SFA +++ P PY RP I G I L+ SRH CVE QD V FIPND + K
Sbjct: 602 LDAVVSFAHVSNGAPIPYVRPVILEKGQGRIKLKASRHACVEVQDEVAFIPNDVHFEKDK 661
Query: 656 SWFQII 661
F II
Sbjct: 662 QMFHII 667
>gi|452822720|gb|EME29737.1| DNA mismatch repair protein MutS [Galdieria sulphuraria]
Length = 956
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 270/728 (37%), Positives = 411/728 (56%), Gaps = 37/728 (5%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
+G+ + ++ EF +D F ES LV+L KE ++ E + RD R
Sbjct: 177 LGVAFYEIGDSSFLTGEFCEDETFALCESILVSLQAKEIFYCPADLQEKELRKFRDMTAR 236
Query: 215 CGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL-----VSGFEIAPGALGALLSYAE 269
++T + + EF++ +V+DL +++ + P L + + G + E
Sbjct: 237 LNFLMTPQDRKEFESSLVVRDLTKVLGDASIPPSTLEQTLVLQALAVLLKCCGLVPDLIE 296
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL--------ESKTDANKNFSLFGLMN 321
+ + + ++ + Y+RLD+A +R L++L + + SL+G++N
Sbjct: 297 SNDEHLSKPRFLLKPLEMSQYLRLDAACIRGLDLLPLNNRELERVASSVKRKDSLYGILN 356
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERL 380
+T T MG RLL WL PL ++ EI R ++V+ F+++ R + R +HLK + D+ RL
Sbjct: 357 KTKTV-MGSRLLKKWLLMPLQNIEEIEKRQNVVETFIENAIFRTEFRDRHLKFVPDLARL 415
Query: 381 MHNLEK-RRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
+K + L+ ++ LYQ SIRLP + QY S + Y L SL + L
Sbjct: 416 CRRFQKLKNVTLRHVICLYQLSIRLPLLLDCFSQYTMADDSSPLKPYWQRLISLHTE--L 473
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
++F L+E ++DLD ++N EY++S+ D LS + ++ + +I +H+ S L+L
Sbjct: 474 DRFEELIEATIDLDLVQNNEYVVSARIDENLSEMMRVKDEILAEIAVVHEDVCSHLNLKT 533
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
DK LKL++ G FR+++K+E +R +++LETRKDG++F L +L ++Y
Sbjct: 534 DK-LKLERKESAGFFFRLSRKDERLVRG--NPHYVILETRKDGIRFVTKALNRLSERYFC 590
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ EY Q+E+ N++IQ ++ +F+ + +L+ELDVL +FA +A P PY RP I+
Sbjct: 591 ICTEYDKKQEEMENKIIQVVASYISVFEEASLVLAELDVLSTFAIVAVDAPEPYCRPSID 650
Query: 620 PPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLI-------RGKSWFQIITGPNMGGKST 671
P G I L +RHP VE + FI NDC L R F ++TGPNMGGKST
Sbjct: 651 QPRTG-ICLIQARHPIVEENLEGKQFIANDCFLENVSDSDDRLGQVFIVVTGPNMGGKST 709
Query: 672 FIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 731
+IR VGV LMA +G FVP A I++ D I R+G+ D Q+ GVSTFM EMLET+SIL+
Sbjct: 710 YIRTVGVITLMAHIGCFVPAKSARIALTDRILCRIGSTDYQMFGVSTFMAEMLETSSILR 769
Query: 732 GATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANE 791
A+ SLII+DELGRGT T +GFGLA++I E++V+ I P +FATHFHEL LA
Sbjct: 770 LASPSSLIIVDELGRGTCTEEGFGLAYSIAEYIVQHIGCPCMFATHFHELAFLA------ 823
Query: 792 FNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
+T V N H+SA D ++KL LYKVE G CD+SFGIHVAE A FP SV+ A++
Sbjct: 824 -DTFPQGVVQNVHMSAEPDPETQKLQFLYKVEAGICDKSFGIHVAELARFPASVLQDAKD 882
Query: 852 KAAELEDF 859
LE +
Sbjct: 883 TVDRLEKY 890
>gi|345309198|ref|XP_003428802.1| PREDICTED: DNA mismatch repair protein Msh2-like, partial
[Ornithorhynchus anatinus]
Length = 607
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/617 (41%), Positives = 363/617 (58%), Gaps = 44/617 (7%)
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
S D + + SL L+NR C G+RL++ W+KQPLLD N I RL++V+AFV+D LRQ
Sbjct: 2 SVEDTSGSQSLAALLNR-CKTPQGQRLVNQWIKQPLLDKNRIEERLNLVEAFVEDGELRQ 60
Query: 366 DLRQHL-KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE 424
L++ L +R D+ RL +++ A LQ ++YQ+ +LP + AL++YEG L+
Sbjct: 61 TLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRIYQTINQLPGVIQALEKYEGAHQMLLLA 120
Query: 425 RYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
+ PL L D +KF ++ET++DL+Q+EN E+++ +S+D L+ L+ SLE ++
Sbjct: 121 IFATPLSDLRSD--FSKFQEMIETTLDLNQVENHEFLVKASFDPNLTELRETMNSLEEKM 178
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
S A +L L K++KL+ Q G FR+T KEE +R +F L+ +K+GVK
Sbjct: 179 QSALASAARELGLEAGKSVKLESNAQMGFYFRVTCKEEKSLRN--NKKFNTLDIQKNGVK 236
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
F N+KL L ++Y K EEY+ Q +V ++ + + E ++L +L++LD ++SFA
Sbjct: 237 FNNSKLSSLNEEYTKSREEYEEAQNAIVKEIVNISSGYVEPMQALNDVLAQLDAMVSFAH 296
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGP 664
+A+S P PY RP I G + L G RH CVE QD V FIPND RG+ F I+TGP
Sbjct: 297 VATSAPVPYVRPTILDKGHGRLALRGCRHACVEVQDEVAFIPNDVVFERGRQTFHIVTGP 356
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ D I ARVGAGD QL+GVSTFM EML
Sbjct: 357 NMGGKSTYIRQTGVVVLMAQIGCFVPCEAAEVSIVDRILARVGAGDSQLKGVSTFMAEML 416
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
ETASIL+ FG E++ + LFATHFHELTAL
Sbjct: 417 ETASILR----------------------FG-CLGHSEYIATRVGTFCLFATHFHELTAL 453
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
A Q+ V N HV+A +++ LTMLY+V PG CDQSFGIHVAE A+FP+
Sbjct: 454 A---------DQLPAVNNLHVTAL--TSNDTLTMLYRVRPGVCDQSFGIHVAELASFPKH 502
Query: 845 VVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMP 904
V+ A+EKA ELE+F + + E +KR + +G L + +P
Sbjct: 503 VIESAKEKALELEEFQNIGKPRESDESEPAAKRCY----REREQGEKIIQDLLSKVKALP 558
Query: 905 LETMDLKEALERVKRMK 921
M ++ ++K++K
Sbjct: 559 FPEMSEEDIRTKLKQLK 575
>gi|299117067|emb|CBN73838.1| MutS protein homolog 2B [Ectocarpus siliculosus]
Length = 909
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 321/935 (34%), Positives = 486/935 (51%), Gaps = 108/935 (11%)
Query: 21 FLSFYKTLPNDTRAVRFFDRRD---YYTAHGENATFIAKTYYHTTTALRQLGTGSDALSS 77
F +F++ L + VRFF R Y+TAHG +A +++ + T+ + S L S
Sbjct: 5 FATFFRRLESIGGLVRFFRRSKEWVYFTAHGLDADLVSREAFKNTSVV---SFQSGGLPS 61
Query: 78 VSVSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGS-YEDVLFANNE 134
+++S +F ++ LL + + +E++E G S W S +PGN+ + D+ E
Sbjct: 62 ITISVKVFSSLVPALLAK--NFRIEVWEQLGGSSTWTRRLSASPGNVEAIMADIASGEGE 119
Query: 135 -MQD------TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVA 187
QD T V+++ + N +G+ Y + R++GL D +++E +V
Sbjct: 120 GRQDEDAASGTAVMMSAYANAAGG---VGVAYANPAFRIVGLL----DCALSDLEGVVVQ 172
Query: 188 LGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTR--DLVQDLDRLV----- 240
+G +EC+L + +++ L + + RCGV+ T + FK+ ++DL LV
Sbjct: 173 VGARECILEEQGPQAA---GLEEIMARCGVLCTPKSLQAFKSAKDGTIKDLATLVRVGGV 229
Query: 241 -----------RGSVEPVRDLVSGFEIAPGALGALLSY--AELLSDESNYGNYYIRKYSL 287
G V + + E+ + +L+ D SN+G + + L
Sbjct: 230 GGGAAATGSVPSGESADVSHVAAAREMTLALAALQALFRHLDLMEDSSNHGTFSLTMDEL 289
Query: 288 DSYMRLDSAAMRALNVLESKT-----------DANK-NFSLFGLMNRTCTAGMGKRLLHM 335
YM D+AA +A+ V S T D+ + +FSLF ++N+TCT+ MG RLL
Sbjct: 290 RKYMHYDAAASKAMGVFPSPTRFQLASALGQGDSGRLDFSLFSILNQTCTS-MGSRLLRE 348
Query: 336 WLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ---HLKRISDIERLMHNLEKR---RA 389
WL+ PL+DV EI +R +++ + AL LR+ L+ I D+ER+M ++ R
Sbjct: 349 WLQHPLVDVQEITSRHCMIETICSEKALIDTLRKGSGMLRGIPDLERIMQRFLRKPPQRV 408
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEG---------QFSSLIKERYLDPLESLTDDDHLN 440
L ++ +Y++ +RL I AL G +L +ER + PL+ + L+
Sbjct: 409 TLATLLGVYRAVMRLSSIVGALDDAFGDDAAGDAAESGPTLFRERIVSPLQKAVSN--LS 466
Query: 441 KFIALVETSVDLDQL---ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
KF +L E +DLD L + + + S+ L L E ++ + K +
Sbjct: 467 KFQSLCEEVIDLDHLRESDGKQVRVRPSFHAELQRLGQELAGTSEEMAGVLKDVETASKA 526
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
P + +KL+ H R+TKK++ + K + L +K GV FT +L+ + +
Sbjct: 527 PAGR-IKLEFNAVHSHHLRVTKKDQAFVGK--CKAALTLSVQKAGVIFTTDRLRSVDARA 583
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
++ E+Y++ Q ++V + I A T++ + S A ++++LDVLLS + RP
Sbjct: 584 TRLKEQYEDVQSKIVLQAITVAGTYTPVLSSAAKIVAKLDVLLSLCVCVHLWD--WVRPR 641
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
+ P I ++G RHP VEA FIPND KL S I+TGPNM GKSTFIR V
Sbjct: 642 LLPVGSQTIDIKGLRHPSVEAARGAGLFIPNDIKL-GSNSRMTIVTGPNMAGKSTFIRSV 700
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
G+ L+AQ+GSFVP + A ++V D I ARVGA D QLRGVSTFM EMLET +IL+ A +
Sbjct: 701 GIACLLAQIGSFVPAEEAVMTVIDRICARVGASDNQLRGVSTFMAEMLETTAILRKANRQ 760
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SL+I+DELGRGTST DGFG+AWA+ + L+ A LFATHFHELTA+ E +
Sbjct: 761 SLVIVDELGRGTSTCDGFGIAWAVADRLISS-GALCLFATHFHELTAIEQEKGGK----- 814
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
GV N HV+A D+ S KLTMLYKV G+CD+SFGIHVA ANFP VV+ A A L
Sbjct: 815 --GVQNLHVTAEADTASNKLTMLYKVTQGSCDRSFGIHVARIANFPGHVVSEAETLAQCL 872
Query: 857 EDFTP---SAVISDDAKIEV---------GSKRKR 879
E+ P A SD+ V GSKRKR
Sbjct: 873 ENGEPLVRRANSSDNGGPGVGGEGELTPNGSKRKR 907
>gi|398021407|ref|XP_003863866.1| DNA mismatch repair protein, putative [Leishmania donovani]
gi|322502100|emb|CBZ37183.1| DNA mismatch repair protein, putative [Leishmania donovani]
Length = 939
Score = 447 bits (1151), Expect = e-122, Method: Compositional matrix adjust.
Identities = 296/885 (33%), Positives = 458/885 (51%), Gaps = 71/885 (8%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH--GENATFIAKTYYHTTTALRQLGTG---SDALSS 77
+F + ++ R F R + G AT +AK Y +T L++ +G S +
Sbjct: 12 AFLALGADSSQCFRMFSRGSNPGCYVLGWWATLVAKEYIKSTAVLKKWSSGNSSSAMVDV 71
Query: 78 VSVSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLFA--NN 133
V V+ + + I RD LL R ++E YE +G ++ + G+PGN+ +E LF
Sbjct: 72 VVVNDALCKEIIRDCLLRR-GVSVEYYERETAGGSYVCRQRGSPGNITDFEASLFEVEEA 130
Query: 134 EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE- 192
E+Q +F ++ G IG ++ T R L AE+ D T++++ + KE
Sbjct: 131 EIQLLASGSLVFGATQDTGTAIGFAALNNTLRQLTFAEYTDTPQLTSLDALVAQTNLKEL 190
Query: 193 --CLLPTEAVKSSECK--------TLRDALTRCGVMLTERKKTEF----KTRDLVQDLDR 238
C++ A +E +R RCGV L+ R E K + L+
Sbjct: 191 LLCVMSPAASAGAEATFNDDDRITAVRRICERCGVQLSVRSLREIQQLQKEEAAAKGLEA 250
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGA---LLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
L P L E+ P A A +L +++ D SN +Y+R+ +YM+LDS
Sbjct: 251 LAEILRVPEERL--SLELCPIARQAVENILGRIDVM-DPSNRRAFYLRRTVPSTYMKLDS 307
Query: 296 AAMRALNVLESKTDANKNF--SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
AA+ ALN++ K + S+F +NR C GMG R + WL QPL ++IN RL +
Sbjct: 308 AAIEALNLVSKKPEPRGTLPTSVFSWLNR-CHTGMGARAMRQWLLQPLRCADDINQRLTM 366
Query: 354 VQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V+ FV++ LR Q LKR D++RL L++R L+ + +P L
Sbjct: 367 VELFVENPILRDMFTTQVLKRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPAALQVLG 426
Query: 413 QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
Y G S L+K+ Y+ P+E + +DH+ L+E +VD + +++++D L A
Sbjct: 427 TYTGPQSKLLKDEYIAPMEDI--NDHMANLKTLIEATVDFS--DRNAVRMNAAFDDELQA 482
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
L + S +RQI + + S +K LK + +G+VFR+++KE+ ++R T +
Sbjct: 483 LHEQLTSTQRQIDKEYGRVLSKYGWN-EKQLKHEYHGTYGYVFRVSRKEDRQLRS--TKE 539
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
I + T KDGV+F + K+ L +QY+++ ++Y+ Q +L +++ T ++ + +
Sbjct: 540 LITVSTSKDGVRFVSEKMAALSEQYRRISDDYETRQMDLKRKLVDTIASYLPVLDDAKEL 599
Query: 593 LSELDVLLSFADLASSCPTPYTRPDIN--PPDVGDIILEGS----------------RHP 634
++ LDV +++A + CP P RP + P V + EG+ RHP
Sbjct: 600 IATLDVFVAWALVVKDCPRPMVRPAVREAPGTVALVKQEGTSARGADAAPVLSFKRLRHP 659
Query: 635 CVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE + + N L + +ITGPNMGGKST++R VGV +++AQ G FVP D A
Sbjct: 660 LVELRQ-PGYKANPLHLTTQTNGL-LITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAA 717
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+ VRD + RVGA D +GVSTFM EMLE+ASIL GAT +L IIDELGRGTSTYDGF
Sbjct: 718 EVQVRDAVMCRVGATDHLAQGVSTFMVEMLESASILTGATQDTLAIIDELGRGTSTYDGF 777
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
GLAWAI + + +RA LF+THFHELT L +Q + N H A +D ++
Sbjct: 778 GLAWAIAQDVAVRVRATLLFSTHFHELTQLP---------QQCSALQNMHFGAEVDESAG 828
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
L Y ++PG C +S+G++VA A+ PESV+ A+ K AE E F
Sbjct: 829 TLRFSYTLQPGPCGRSYGLYVASLAHLPESVIACAKVKVAEWETF 873
>gi|146097510|ref|XP_001468124.1| MSH2 [Leishmania infantum JPCM5]
gi|134072491|emb|CAM71203.1| MSH2 [Leishmania infantum JPCM5]
Length = 939
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 296/885 (33%), Positives = 457/885 (51%), Gaps = 71/885 (8%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH--GENATFIAKTYYHTTTALRQLGTG---SDALSS 77
+F + ++ R F R + G AT +AK Y +T L++ +G S +
Sbjct: 12 AFLALGADSSQCFRMFSRGSNPGCYVLGWWATLVAKEYIKSTAVLKKWSSGNSSSAMVDV 71
Query: 78 VSVSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLFA--NN 133
V V+ + + I RD LL R ++E YE +G ++ + G+PGN+ +E LF
Sbjct: 72 VVVNDALCKEIIRDCLLRR-GVSVEYYERETAGGSYVCRQRGSPGNITDFEASLFEVEEA 130
Query: 134 EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE- 192
E+Q +F ++ G IG ++ T R L AE+ D T++++ + KE
Sbjct: 131 EIQLLASGSLVFGATQDTGTAIGFAALNNTLRQLTFAEYTDTPQLTSLDALVAQTNLKEL 190
Query: 193 --CLLPTEAVKSSECK--------TLRDALTRCGVMLTERKKTEF----KTRDLVQDLDR 238
C++ A +E +R RCGV L+ R E K + L+
Sbjct: 191 LLCVMSPAASAGAEATFSDDDRITAVRRICERCGVQLSVRSLREIQQLQKEEAAAKGLEA 250
Query: 239 LVRGSVEPVRDLVSGFEIAPGALGA---LLSYAELLSDESNYGNYYIRKYSLDSYMRLDS 295
L P L E+ P A A +L +++ D SN +Y+R+ +YM+LDS
Sbjct: 251 LAEILRVPEERL--SLELCPIARQAVENILGRIDVM-DPSNRRAFYLRRTVPSTYMKLDS 307
Query: 296 AAMRALNVLESKTDANKNF--SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
AA+ ALN++ K + S+F +NR C GMG R + WL QPL +IN RL +
Sbjct: 308 AAIEALNLVSKKPEPRGTLPTSVFSWLNR-CHTGMGARAMRQWLLQPLRCAEDINQRLTM 366
Query: 354 VQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ 412
V+ FV++ LR Q LKR D++RL L++R L+ + +P L
Sbjct: 367 VELFVENPILRDMFTTQVLKRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPAALQVLG 426
Query: 413 QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSA 472
Y G S L+K+ Y+ P+E + +DH+ L+E +VD + +++++D L A
Sbjct: 427 TYTGPQSKLLKDEYIAPMEDI--NDHMANLKTLIEATVDFS--DRNAVRMNAAFDDELQA 482
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ 532
L + S +RQI + + S +K LK + +G+VFR+++KE+ ++R T +
Sbjct: 483 LHEQLTSTQRQIDKEYGRVLSKYGWN-EKQLKHEYHGTYGYVFRVSRKEDRQLRS--TKE 539
Query: 533 FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATM 592
I + T KDGV+F + K+ L +QY+++ ++Y+ Q +L +++ T ++ + +
Sbjct: 540 LITVSTSKDGVRFVSEKMAALSEQYRRISDDYETRQMDLKRKLVDTIASYLPVLDDAKEL 599
Query: 593 LSELDVLLSFADLASSCPTPYTRPDIN--PPDVGDIILEGS----------------RHP 634
++ LDV +++A + CP P RP + P V + EG+ RHP
Sbjct: 600 IATLDVFVAWALVVKDCPRPMVRPAVREAPGTVALVKQEGTSARGADAAPLLSFKRLRHP 659
Query: 635 CVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE + + N L + +ITGPNMGGKST++R VGV +++AQ G FVP D A
Sbjct: 660 LVELRQ-PGYKANPLHLTTQTNGL-LITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAA 717
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+ VRD + RVGA D +GVSTFM EMLE+ASIL GAT +L IIDELGRGTSTYDGF
Sbjct: 718 EVQVRDAVMCRVGATDHLAQGVSTFMVEMLESASILTGATQDTLAIIDELGRGTSTYDGF 777
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
GLAWAI + + +RA LF+THFHELT L +Q + N H A +D ++
Sbjct: 778 GLAWAIAQDVAVRVRATLLFSTHFHELTQLP---------QQCSALQNMHFGAEVDESAG 828
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
L Y ++PG C +S+G++VA A+ PESV+ A+ K AE E F
Sbjct: 829 TLRFSYTLQPGPCGRSYGLYVASLAHLPESVIACAKVKVAEWETF 873
>gi|71748512|ref|XP_823311.1| DNA mismatch repair protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832979|gb|EAN78483.1| DNA mismatch repair protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 951
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 296/896 (33%), Positives = 475/896 (53%), Gaps = 96/896 (10%)
Query: 30 NDTRAVRFFDRRDYYT-AHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETI 88
+DT +R F R G A+ +A+ Y +T L+ +G DA V+V+ ++ +
Sbjct: 19 DDTSCLRLFSRASAGCFILGSWASLVAREYVKSTAVLKNW-SGVDA---VAVNDSITREV 74
Query: 89 ARDLLLERTDHTLELY--EGSGSNWRLVKSGTPGNLGSYEDVLFA--NNEMQDTPV--IV 142
RD LL R ++E Y + SG + ++ G+PG++ +E +LFA + E+Q + +V
Sbjct: 75 IRDCLLRR-GVSVEQYDRQTSGGRYVCMRRGSPGHIADFEAMLFAFEDAEIQLMAIGSVV 133
Query: 143 ALFPNFRENG-----CTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT 197
R NG +G ++ T R L AE+ D TN++ + K+ L
Sbjct: 134 IDDKANRVNGPGGQHVRVGYAALNTTLRTLTYAEYHDTPQLTNLDVLMAQCNLKQLLYSN 193
Query: 198 ----------EAVKSSECKTLRDAL-------TRCGVMLTERKKTEF-----KTR----- 230
+A S E + D L R + L ER ++ K+R
Sbjct: 194 TDFSMNNTGEKAADSDESREQSDLLRALKQLCERANITLQERGQSNLPHGKQKSRATKRN 253
Query: 231 ------DLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRK 284
+L+ L+ ++R V R ++ F +A AL +LL A D +N +Y++
Sbjct: 254 STGPNGELLSTLEGILR--VPEDRHGLNSFPLASRALESLLESAIDPFDSTNQHTFYLKH 311
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
++M++D+AA+ AL+++ K +A + S++ +NR CT GMG RL+ WL QPL
Sbjct: 312 VVPSTFMKMDAAAIEALHIIHRKPEARGSMPTSIYSWLNR-CTTGMGSRLMQQWLLQPLR 370
Query: 343 DVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +IN RL +VQ V+ LR L Q L+R +D++RL L++R L+ + + +
Sbjct: 371 SIEDINQRLSLVQIMVESPILRDALITQVLRRCTDMDRLNRKLQRRTVALKDLQSILVFA 430
Query: 402 IRLPYIRSALQQYEGQF-SSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
+P L+ Y G SSL+ + Y+ PLE +++ HL+ L+ +VDL +
Sbjct: 431 NTVPLAVDVLRTYHGGHDSSLLLKGYVTPLEDISE--HLSNLRTLINATVDLS--DENTV 486
Query: 461 MISSSYDTGLSALKNEQESL----ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
I+ +D LS L+ ++++L E++ H + KQ +K +K + +G+VFR
Sbjct: 487 RINPEFDDDLSFLERQRQNLVKAIEKENHRVLKQCGW-----TEKQMKCEYHASYGYVFR 541
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
+ +K++ ++R + +FI + T KDGV+F + +L L +QY+ + E+YK Q+ L +++
Sbjct: 542 VPRKDDHQVRT--SKEFITVSTAKDGVRFVSGQLSSLSEQYKGITEDYKTRQQVLKKKLV 599
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI---------- 626
T T+ + +L+ LDV ++A + P RP + P ++
Sbjct: 600 DTVATYLPVLDDAKELLAALDVFAAWALVVKDSSRPMVRPTVRAPQSEEVKGNVDNNSNG 659
Query: 627 ---ILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
+ +RHP VE + F PN +L + IITGPNMGGKSTF+R +GV + +A
Sbjct: 660 AILTIVNARHPLVELRQPA-FTPNTVQLTNEANAL-IITGPNMGGKSTFMRSIGVCVALA 717
Query: 684 QVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDE 743
Q G FVP D A I VRD I RVGA D +GVSTFM EMLE+A++L AT ++L I+DE
Sbjct: 718 QAGCFVPADSADIVVRDAIMCRVGATDHLAQGVSTFMVEMLESAAMLNSATQQTLAIVDE 777
Query: 744 LGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANY 803
LGRGTSTYDGFGLAWAI + + ++ LF+THFHE+T LA + N V N
Sbjct: 778 LGRGTSTYDGFGLAWAIAQEVAVNAKSALLFSTHFHEMTQLAARHTN---------VRNV 828
Query: 804 HVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
H A +D+ +R L Y+++PG C +S+G++VA+ A+ P+ V+ AR+KA ELEDF
Sbjct: 829 HFGADVDTAARTLRFSYQLQPGPCGRSYGLYVAQLAHIPDDVLDSARQKAVELEDF 884
>gi|13027779|gb|AAK08648.1| putative mismatch repair protein MSH2 [Trypanosoma brucei]
Length = 951
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 297/896 (33%), Positives = 475/896 (53%), Gaps = 96/896 (10%)
Query: 30 NDTRAVRFFDRRDYYT-AHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETI 88
+DT +R F R G A+ +A+ Y +T L+ +G DA V+V+ ++ +
Sbjct: 19 DDTSCLRLFSRASAGCFILGSWASLVAREYVKSTAVLKNW-SGVDA---VAVNDSITREV 74
Query: 89 ARDLLLERTDHTLELY--EGSGSNWRLVKSGTPGNLGSYEDVLFA--NNEMQDTPV--IV 142
RD LL R ++E Y + SG + ++ G+PG++ +E +LFA + E+Q + +V
Sbjct: 75 IRDCLLRR-GVSVEQYDRQTSGGRYVCMRRGSPGHIADFEAMLFAFEDAEIQLMAIGSVV 133
Query: 143 ALFPNFRENG-----CTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT 197
R NG +G ++ T R L AE+ D TN++ + K+ L
Sbjct: 134 IDDKANRVNGPGGQHVRVGYAALNTTLRTLTYAEYHDTPQLTNLDVLMAQCNLKQLLYSN 193
Query: 198 ----------EAVKSSECKTLRDAL-------TRCGVMLTERKKTEF-----KTR----- 230
+A S E + D L R + L ER ++ K+R
Sbjct: 194 TDFSMNNTGEKAADSDESREQSDLLRALKQLCERANITLQERGQSNLPHGKQKSRATKRN 253
Query: 231 ------DLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRK 284
+L+ L+ ++R V R ++ F +A AL +LL A D +N +Y++
Sbjct: 254 STGPNGELLSTLEGILR--VPEDRHGLNSFPLASRALESLLESAIDPFDSTNQHTFYLKH 311
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
++M++D+AA+ AL+++ K +A + S++ +NR CT GMG RL+ WL QPL
Sbjct: 312 VIPSTFMKMDAAAIEALHIIHRKPEARGSMPTSIYSWLNR-CTTGMGSRLMQQWLLQPLR 370
Query: 343 DVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +IN RL +VQ V+ LR L Q L+R +D++RL L++R L+ + + +
Sbjct: 371 SIEDINQRLSLVQIMVESPILRDALITQVLRRCTDMDRLNRKLQRRTVALKDLQSILVFA 430
Query: 402 IRLPYIRSALQQYEGQF-SSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
+P L+ Y G SSL+ + Y+ PLE +++ HL+ L+ +VDL +
Sbjct: 431 NTVPLAVDVLRTYHGGHDSSLLLKGYVTPLEDISE--HLSNLRTLINATVDLS--DENTV 486
Query: 461 MISSSYDTGLSALKNEQESL----ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
I+ +D LS L+ ++++L E++ H + KQ +K +K + +G+VFR
Sbjct: 487 RINPEFDDDLSFLERQRQNLVKAIEKENHRVLKQCGW-----TEKQMKCEYHASYGYVFR 541
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
+ +K++ ++R + +FI + T KDGV+F + +L L +QY+ + E+YK Q+ L +++
Sbjct: 542 VPRKDDHQVRT--SKEFITVSTAKDGVRFVSGQLSSLSEQYKGITEDYKTRQQVLKKKLV 599
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI-------------NPPDV 623
T T+ + +L+ LDV ++A + P RP + N D
Sbjct: 600 DTVATYLPVLDDAKELLAALDVFAAWALVVKDSSRPMVRPTVRATQSEEVKGNVDNNSDG 659
Query: 624 GDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
+ + +RHP VE + F PN +L + IITGPNMGGKSTF+R +GV + +A
Sbjct: 660 AILTIVNARHPLVELRQPA-FTPNTVQLTNEANAL-IITGPNMGGKSTFMRSIGVCVALA 717
Query: 684 QVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDE 743
Q G FVP D A I VRD I RVGA D +GVSTFM EMLE+A++L AT ++L I+DE
Sbjct: 718 QAGCFVPADSADIVVRDAIMCRVGATDHLAQGVSTFMVEMLESAAMLNSATQQTLAIVDE 777
Query: 744 LGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANY 803
LGRGTSTYDGFGLAWAI + + ++ LF+THFHE+T LA + N V N
Sbjct: 778 LGRGTSTYDGFGLAWAIAQEVAVNAKSALLFSTHFHEMTQLAARHTN---------VRNV 828
Query: 804 HVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
H A +D+ +R L Y+++PG C +S+G++VA+ A+ P+ V+ AR+KA ELEDF
Sbjct: 829 HFGADVDTAARTLRFSYQLQPGPCGRSYGLYVAQLAHIPDDVLDFARQKAVELEDF 884
>gi|261333241|emb|CBH16236.1| DNA mismatch repair protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 951
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 297/896 (33%), Positives = 475/896 (53%), Gaps = 96/896 (10%)
Query: 30 NDTRAVRFFDRRDYYT-AHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETI 88
+DT +R F R G A+ +A+ Y +T L+ +G DA V+V+ ++ +
Sbjct: 19 DDTSCLRLFSRASAGCFILGSWASLVAREYVKSTAVLKNW-SGVDA---VAVNDSITREV 74
Query: 89 ARDLLLERTDHTLELY--EGSGSNWRLVKSGTPGNLGSYEDVLFA--NNEMQDTPV--IV 142
RD LL R ++E Y + SG + ++ G+PG++ +E +LFA + E+Q + +V
Sbjct: 75 IRDCLLRR-GVSVEQYDRQTSGGRYVCMRRGSPGHIADFEAMLFAFEDAEIQLMAIGSVV 133
Query: 143 ALFPNFRENG-----CTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT 197
R NG +G ++ T R L AE+ D TN++ + K+ L
Sbjct: 134 IDDKANRVNGPGGQHVRVGYAALNTTLRTLTYAEYHDTPQLTNLDVLMAQCNLKQLLYSN 193
Query: 198 ----------EAVKSSECKTLRDAL-------TRCGVMLTERKKTEF-----KTR----- 230
+A S E + D L R + L ER ++ K+R
Sbjct: 194 TDFSMNNTGEKAADSDESREQSDLLRALKQLCERANITLQERGQSNLPHGKQKSRATKRN 253
Query: 231 ------DLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRK 284
+L+ L+ ++R V R ++ F +A AL +LL A D +N +Y++
Sbjct: 254 STGPNGELLSTLEGILR--VPEDRHGLNSFPLASRALESLLESAIDPFDSTNQHTFYLKH 311
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
++M++D+AA+ AL+++ K +A + S++ +NR CT GMG RL+ WL QPL
Sbjct: 312 VIPSTFMKMDAAAIEALHIIHRKPEARGSMPTSIYSWLNR-CTTGMGSRLMQQWLLQPLR 370
Query: 343 DVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +IN RL +VQ V+ LR L Q L+R +D++RL L++R L+ + + +
Sbjct: 371 SIEDINQRLSLVQIMVESPILRDALITQVLRRCTDMDRLNRKLQRRTVALKDLQSILVFA 430
Query: 402 IRLPYIRSALQQYEGQF-SSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
+P L+ Y G SSL+ + Y+ PLE +++ HL+ L+ +VDL +
Sbjct: 431 NTVPLAVDVLRTYHGGHDSSLLLKGYVTPLEDISE--HLSNLRTLINATVDLS--DENTV 486
Query: 461 MISSSYDTGLSALKNEQESL----ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
I+ +D LS L+ ++++L E++ H + KQ +K +K + +G+VFR
Sbjct: 487 RINPEFDDDLSFLERQRQNLVKAIEKENHRVLKQCGW-----TEKQMKCEYHASYGYVFR 541
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
+ +K++ ++R + +FI + T KDGV+F + +L L +QY+ + E+YK Q+ L +++
Sbjct: 542 VPRKDDHQVRT--SKEFITVSTAKDGVRFVSGQLSSLSEQYKGITEDYKTRQQVLKKKLV 599
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI-------------NPPDV 623
T T+ + +L+ LDV ++A + P RP + N D
Sbjct: 600 DTVATYLPVLDDAKELLAALDVFAAWALVVKDSSRPMVRPTVRATQSEEVKGNVDNNSDG 659
Query: 624 GDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
+ + +RHP VE + F PN +L + IITGPNMGGKSTF+R +GV + +A
Sbjct: 660 AILTIVNARHPLVELRQPA-FTPNTVQLTNEANAL-IITGPNMGGKSTFMRSIGVCVALA 717
Query: 684 QVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDE 743
Q G FVP D A I VRD I RVGA D +GVSTFM EMLE+A++L AT ++L I+DE
Sbjct: 718 QAGCFVPADSADIVVRDAIMCRVGATDHLAQGVSTFMVEMLESAAMLNSATQQTLAIVDE 777
Query: 744 LGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANY 803
LGRGTSTYDGFGLAWAI + + ++ LF+THFHE+T LA + N V N
Sbjct: 778 LGRGTSTYDGFGLAWAIAQEVAVNAKSALLFSTHFHEMTQLAARHTN---------VRNV 828
Query: 804 HVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
H A +D+ +R L Y+++PG C +S+G++VA+ A+ P+ V+ AR+KA ELEDF
Sbjct: 829 HFGADVDTAARTLRFSYQLQPGPCGRSYGLYVAQLAHIPDDVLDSARQKAVELEDF 884
>gi|154343732|ref|XP_001567810.1| putative DNA mismatch repair protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065144|emb|CAM40570.1| putative DNA mismatch repair protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 940
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 287/859 (33%), Positives = 451/859 (52%), Gaps = 70/859 (8%)
Query: 48 GENATFIAKTYYHTTTALRQLGTG----SDALSSVSVSKNMFETIARDLLLERTDHTLEL 103
G ATF+AK Y +T L+Q G S + V V+ + + + RD LL R ++E
Sbjct: 39 GWWATFVAKEYIKSTAVLKQWPAGGSSSSGTIDVVVVNDALCKEVIRDCLLRR-GVSVEY 97
Query: 104 YE--GSGSNWRLVKSGTPGNLGSYEDVLFA--NNEMQDTPVIVALFPNFRENGCTIGLGY 159
YE G + + G+PGN+ +E LF E+Q +F ++ IG
Sbjct: 98 YERETPGGPYVCRQRGSPGNITDFEASLFEFEETEIQLLASGSLVFGAKQDTQPKIGFAA 157
Query: 160 VDLTKRVLGLAEFLDDSHFTNVESALVALGCKE---CLLPTEAVKSSECK--------TL 208
++ T R L AE+ D T++++ + KE C++ A E +
Sbjct: 158 LNNTLRQLSFAEYTDTPQLTSLDALVAQTNLKELLLCVMSPTASAGGEANLDDDDRITAV 217
Query: 209 RDALTRCGVML---TERKKTEFKTRDL----VQDLDRLVRGSVEPVRDLVSGFEIAPGAL 261
R RCGV L T R+ + +TR+ ++ L ++R V R + IA A+
Sbjct: 218 RRICERCGVQLSVRTLREVQQLQTREASAKGIEALAEILR--VPEERLPLELCPIARHAV 275
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFGL 319
+LS +++ D SN +Y+R+ +Y++LDSAA+ ALN++ K + + S+F
Sbjct: 276 ENILSRIDVM-DSSNQRAFYLRRIVPSTYVKLDSAAIEALNLVSKKPEPRGSLPTSVFSW 334
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIE 378
+NR C GMG R + WL QPL V++IN RL +V+ FV++ LR Q LKR D++
Sbjct: 335 LNR-CHTGMGARAMRQWLLQPLRCVDDINQRLTMVELFVENPILRDMFTAQVLKRCGDMD 393
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL L++R L++ + +P L Y G S L+K+ ++ P+E + ++H
Sbjct: 394 RLNRKLQRRSLALKETQAFLEFVAVVPAALQTLSTYTGPQSKLLKDEFIAPMEDI--NEH 451
Query: 439 LNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
+ L+E +VD + +++++D L L + + +RQI + S
Sbjct: 452 MKNLKTLIEATVDFS--DRNAVRMNATFDDELQDLHEQLTATQRQIEKEYNHVLSKYGWN 509
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
+K LK + +G+VFR+++KE+ ++R + I L T KDGV+F + K+ L +QY+
Sbjct: 510 -EKQLKYEYHGTYGYVFRVSRKEDRQLRS--AKELITLSTSKDGVRFVSEKMAVLSEQYR 566
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
+V +Y+ Q +L +++ T ++ + +++ LDV +++A + CP P RP +
Sbjct: 567 RVSADYETRQMDLKRKLVDTIASYLPVLDDAKELIATLDVYVAWALVVRDCPRPMVRPVL 626
Query: 619 N--PPDVGDIILEGS----------------RHPCVEAQDWVNFIPNDCKLIRGKSWFQI 660
P V + EG+ RHP VE + + N L + +
Sbjct: 627 REAPEPVTLVKQEGAVVRSADSAPLLSFKGLRHPLVELR-LPGYKANSLHLTTHTNGL-L 684
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNMGGKST++R VGV +++AQ G FVP D A + VRD + RVGA D +GVSTFM
Sbjct: 685 ITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQVRDAVMCRVGATDHLAQGVSTFM 744
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
EMLE+A+I+ GAT +L I+DELGRGTSTYDGFGLAWAI + + +RA LF++HFHE
Sbjct: 745 VEMLESAAIISGATSETLAIVDELGRGTSTYDGFGLAWAIAQDVAARVRATLLFSSHFHE 804
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN 840
LT L +Q + N H A +D + L Y ++PG C +S+G++VA A+
Sbjct: 805 LTQLP---------QQCGALQNVHFGAEVDEAAGTLRFSYTLQPGPCGRSYGLYVASLAH 855
Query: 841 FPESVVTLAREKAAELEDF 859
PESV+ A+ KAAE E F
Sbjct: 856 LPESVIECAKVKAAEWETF 874
>gi|157874726|ref|XP_001685780.1| putative DNA mismatch repair protein [Leishmania major strain
Friedlin]
gi|68128853|emb|CAJ05982.1| putative DNA mismatch repair protein [Leishmania major strain
Friedlin]
Length = 939
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 291/883 (32%), Positives = 461/883 (52%), Gaps = 67/883 (7%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH--GENATFIAKTYYHTTTALRQLGTGSDALSSVSV 80
+F + ++ R F R + G ATF+A Y +T L++ + S + ++V V
Sbjct: 12 AFLALGADSSQCFRMFSRGSNSGCYVLGWWATFVANEYIKSTAVLKKWSSASSSSATVDV 71
Query: 81 ---SKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLFA--NN 133
+ + + I RD LL R ++E +E +G ++ + G+PGN+ +E LF
Sbjct: 72 VVVNDALCKEIIRDCLLRR-GVSVEYFERETAGGSYVCRQRGSPGNITDFEASLFEFEEA 130
Query: 134 EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE- 192
E+Q +F + G TIG ++ T R L AE+ D FT++++ + KE
Sbjct: 131 EIQLLASGSLVFGAKQATGTTIGFAALNNTLRQLSFAEYTDTPQFTSLDALVAQTNLKEL 190
Query: 193 --CLLPTEAVKSSECK--------TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRG 242
C++ A +E +R RCGV L+ R E + V+ + +
Sbjct: 191 LLCVMTPAASAGAEATFSDDDRITAVRRICERCGVQLSVRTLREVQQLQKVEATAKGLEA 250
Query: 243 SVEPVR--DLVSGFEIAPGALGA---LLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
E +R + E+ P A A +L +++ D SN +Y+R+ +Y++LDSAA
Sbjct: 251 LAEILRVPEERLSLELCPIARQAVENILGRIDVM-DPSNQRAFYLRRTVPSTYVKLDSAA 309
Query: 298 MRALNVLESKTDANKNF--SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQ 355
+ ALN++ K + S+F +NR C GMG R + WL QPL ++IN RL +V+
Sbjct: 310 IEALNLVSKKPEPRGTLPTSVFSWLNR-CHTGMGARAMRQWLLQPLRCADDINQRLTMVE 368
Query: 356 AFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY 414
FV++ LR Q LKR SD++RL L++R L+ + +P L Y
Sbjct: 369 LFVENPILRDMFTAQVLKRCSDMDRLNRKLQRRSLALKDTQAFLEFVNVVPAALQVLGTY 428
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
G S L+K+ Y+ P+E + +DH+ L+E +VD + +++++D L L
Sbjct: 429 TGPQSKLLKDEYIAPMEDI--NDHMANLKTLIEATVDFG--DRNAVRMNATFDDELQDLH 484
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI 534
+ S +RQI + + S +K LK + +G+VFR+++KE+ ++R T + I
Sbjct: 485 EQLTSTQRQIDKEYSRVLSKYGWN-EKQLKHEYHGTYGYVFRVSRKEDRQLRS--TKELI 541
Query: 535 VLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLS 594
+ T KDGV+F + K+ L +QY+++ ++Y+ Q +L +++ T ++ + +++
Sbjct: 542 TVSTSKDGVRFVSEKMAALSEQYRRISDDYETRQMDLKRKLVDTIASYLPVLDDAKELIA 601
Query: 595 ELDVLLSFADLASSCPTPYTRPDIN--PPDVGDIILEGS----------------RHPCV 636
LDV +++A + CP P RP + P V + EG+ RHP V
Sbjct: 602 TLDVYVAWALVVKDCPRPMVRPVVREAPGTVTLVKQEGTSARGADAAPLLSFKGLRHPLV 661
Query: 637 EAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
E + + N L + +ITGPNMGGKST++R VGV +++AQ G FVP D A +
Sbjct: 662 ELRQ-PGYKANPLHLTTHTNGL-LITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEV 719
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
VRD + RVGA D +GVSTFM EMLE+ASIL GAT +L I+DELGRGTSTYDGFGL
Sbjct: 720 QVRDAVMCRVGATDHLAQGVSTFMVEMLESASILTGATQDTLAIVDELGRGTSTYDGFGL 779
Query: 757 AWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
AWAI + + +RA LF+THFHELT L +Q + N H A +D ++ L
Sbjct: 780 AWAIAQDVAVRVRATLLFSTHFHELTQLP---------QQCSALQNMHFGAEVDESAGTL 830
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
Y ++PG C +S+G++VA A+ PE V+ A+ K AE E F
Sbjct: 831 RFSYTLQPGPCGRSYGLYVASLAHLPEPVIACAKVKVAEWETF 873
>gi|401427606|ref|XP_003878286.1| MSH2 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322494534|emb|CBZ29836.1| MSH2 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 939
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 289/858 (33%), Positives = 448/858 (52%), Gaps = 69/858 (8%)
Query: 48 GENATFIAKTYYHTTTALRQLGTGSD---ALSSVSVSKNMFETIARDLLLERTDHTLELY 104
G ATF+A Y +T L++ +GS + +V V+ + + I RD LL R ++E Y
Sbjct: 39 GWWATFVANEYIKSTAVLKKWSSGSSSSGTVDAVVVNDALCKEIIRDCLLRR-GVSVEYY 97
Query: 105 E--GSGSNWRLVKSGTPGNLGSYEDVLFA--NNEMQDTPVIVALFPNFRENGCTIGLGYV 160
E +G ++ + G+PGN+ +E LF E+Q +F ++ G IG +
Sbjct: 98 ERETAGGSYVCRQRGSPGNITDFEASLFEFEEAEIQLLASGSLVFGARQDTGTAIGFAAL 157
Query: 161 DLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSS-----------ECKTLR 209
+ T R L AE+ D T++++ + KE LL + +S +R
Sbjct: 158 NNTLRQLSFAEYTDTLQLTSLDALVAQTNLKELLLCVMSSAASAGAEATFNDDDRITAVR 217
Query: 210 DALTRCGVMLTERKKTEF----KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGA-- 263
RCGV L+ R E K + L+ L P L E+ P A A
Sbjct: 218 RICERCGVQLSVRTLREVQQLQKAEAAAKGLEALAEILRVPEERL--SLELCPIARQAVE 275
Query: 264 -LLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFGLM 320
+L +++ D SN +Y+R+ +YM+LDSAA+ AL+++ K + S+F +
Sbjct: 276 NILGRIDVM-DPSNQRAFYLRRTVPSTYMKLDSAAIEALDLVSKKPEPRGTLPTSVFSWL 334
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIER 379
NR C GMG R + WL QPL ++IN RL +V+ FV++ LR Q LKR D++R
Sbjct: 335 NR-CHTGMGARAMRQWLLQPLRCADDINQRLTMVELFVENPILRDMFTAQVLKRCGDMDR 393
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L L++R L+ + +P L Y G S L+K+ Y+ PLE + +DH+
Sbjct: 394 LNRKLQRRSLALKDTQAFLEFVNVVPAALQVLGTYTGPQSKLLKDEYVAPLEDI--NDHM 451
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
L+E +VD + +++++D L L + S +RQI + + S
Sbjct: 452 ANLKTLIEATVDFS--DRNAVRMNATFDDELQDLHEQLTSTQRQIDKEYGRVLSKYGWN- 508
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+K LK + +G+VFR+++KE+ ++R T + I + T KDGV+F + K+ L +QY++
Sbjct: 509 EKQLKHEYHGTYGYVFRVSRKEDRQLRS--TKELITVSTSKDGVRFVSEKMAALSEQYRR 566
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ ++Y+ Q +L +++ T ++ + +++ LDV +++A + CP P RP +
Sbjct: 567 ISDDYETRQMDLKRKLVDTIASYLPVLDDAKELIATLDVYVAWALVVKDCPRPMVRPVVR 626
Query: 620 --PPDVGDIILEGS----------------RHPCVEAQDWVNFIPNDCKLIRGKSWFQII 661
P V + EG+ RHP VE + + N L + +I
Sbjct: 627 EAPGTVTLVKQEGTGARSADAAPLLSFKGLRHPLVELRQ-PAYKANPLHLTTQTNGL-LI 684
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKST++R VGV +++AQ G FVP D A + VRD + RVGA D +GVSTFM
Sbjct: 685 TGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQVRDAVMCRVGATDHLAQGVSTFMV 744
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EMLE+ASIL GAT +L I+DELGRGTSTYDGFGLAWAI + + +RA LF+TH+HEL
Sbjct: 745 EMLESASILTGATQDTLAIVDELGRGTSTYDGFGLAWAIAQDVAVRVRATLLFSTHYHEL 804
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T L +Q + N H A +D ++ L Y ++PG C +S+G++VA A+
Sbjct: 805 TQLP---------QQCSALQNMHFGAEVDESAGTLRFSYTLQPGPCGRSYGLYVASLAHL 855
Query: 842 PESVVTLAREKAAELEDF 859
PESV+ A+ K AE E F
Sbjct: 856 PESVIACAKVKVAEWETF 873
>gi|71665822|ref|XP_819877.1| DNA mismatch repair protein MSH2 [Trypanosoma cruzi strain CL
Brener]
gi|70885197|gb|EAN98026.1| DNA mismatch repair protein MSH2, putative [Trypanosoma cruzi]
Length = 960
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 290/911 (31%), Positives = 460/911 (50%), Gaps = 100/911 (10%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH---GENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
+F +D VR F R G A FIA+ Y +T L+ G + + S
Sbjct: 12 AFTAVGGDDKACVRLFSRGGSTPGCYVLGSWAGFIAREYIRSTAVLKNWGGVDVVVVNDS 71
Query: 80 VSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLF----ANN 133
++K + RD LL R ++E YE G + V+ G+PGN+ +E LF A
Sbjct: 72 IAKE----VIRDCLLRR-GASVEYYERPPGGGTYACVQRGSPGNITDFEATLFSFEEAEI 126
Query: 134 EMQDTPVIVALFPNFREN----------GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
++ T IV N N G +G ++ T R L AE+LD T++++
Sbjct: 127 QLMATGAIVLEKNNTSGNAGKCMISGGQGIRVGFAALNTTLRTLIYAEYLDTLQLTSLDA 186
Query: 184 ALVALGCKE--------CLLPTEAVKSS--------------ECKTLRDALTRCGVMLTE 221
+ KE C + + + K + ++ R + E
Sbjct: 187 LMAQCNLKELIYLDRSRCRISSNSNKGGGAAGVAGGSGREEESLRAVKQLCERANITYRE 246
Query: 222 ---------------------RKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGA 260
R++ D + L+ ++R V R +S +A A
Sbjct: 247 LGHNGAAPSHDSPQKPLQPQGRREGNVTKGDFLSALEDILR--VPEDRLALSNCPLASRA 304
Query: 261 LGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFG 318
+ L+S D +N+ +Y++ ++M+LD+AA++AL+++ K +A + S++
Sbjct: 305 IEYLVSNIIDNFDATNHRAFYLKHTISSTFMKLDTAAIQALHIIHQKPEARGSLPTSVYS 364
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDI 377
+NR C GMG R++ WL QPL + EIN RL +V+ V+D+ LR L Q L+ D+
Sbjct: 365 WLNR-CVTGMGSRMMRQWLLQPLRNAEEINQRLSLVELMVEDSILRDALLSQVLRCCGDM 423
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG-QFSSLIKERYLDPLESLTDD 436
+RL L++R L+ + + +P L+ ++G + L+ + Y+ PLE + +
Sbjct: 424 DRLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDI--N 481
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
+H + L+ +VDL + I+ +D L L+ +++S+ + I S H++
Sbjct: 482 EHFSNLRILITATVDLS--DENTTRINPEFDDELMELEEQRKSVVKAIESEHQRVMKVYG 539
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+K LK + T +G+VFR+T+KE+ ++R + + I + T KDGV+F + +L L +Q
Sbjct: 540 W-TEKQLKCEYHTTYGYVFRVTRKEDQQVRT--SKELITVSTSKDGVRFVSERLSSLSEQ 596
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
Y+ + + Y Q++L +++ T VT+ + +++ LDV +++A + P P RP
Sbjct: 597 YKGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRP 656
Query: 617 DINPPDVGD--------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
I P+ + I L RHP VE + V + PN L + IITGPNMGG
Sbjct: 657 TIRTPETEEEQEGNKSLITLLNVRHPLVELRQPV-YTPNTLHLTDDANAL-IITGPNMGG 714
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KSTF+R VG+ +++AQ G FVP D A + RD + RVGA D +GVSTFM EMLE+A+
Sbjct: 715 KSTFMRSVGICVVLAQAGCFVPADSADMVTRDAVMCRVGATDHLAQGVSTFMVEMLESAA 774
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL AT SL IIDELGRGTSTYDGFGLAWAI + + + R+ LF+THFHE+T LA +
Sbjct: 775 ILNAATRDSLAIIDELGRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLAEHH 834
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
N V N H A +++ L Y++EPG C +S+G++VA+ AN PE VV
Sbjct: 835 TN---------VRNAHFGAEVNTVEGTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQS 885
Query: 849 AREKAAELEDF 859
A+ KAA LE F
Sbjct: 886 AKCKAAGLETF 896
>gi|71421366|ref|XP_811786.1| DNA mismatch repair protein MSH2 [Trypanosoma cruzi strain CL
Brener]
gi|70876490|gb|EAN89935.1| DNA mismatch repair protein MSH2, putative [Trypanosoma cruzi]
Length = 989
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 291/915 (31%), Positives = 461/915 (50%), Gaps = 108/915 (11%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH---GENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
+F +D VR F R G A FIA+ Y +T L+ G + + S
Sbjct: 41 AFTAVGGDDKACVRLFSRGGSTPGCYVLGSWAGFIAREYIRSTAVLKNWGGVDVVVVNDS 100
Query: 80 VSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLF----ANN 133
++K + RD LL R ++E YE G + V+ G+PGN+ +E LF A
Sbjct: 101 IAKE----VIRDCLLRR-GASVEYYERPPGGGTYACVQRGSPGNITDFEATLFSFEEAEI 155
Query: 134 EMQDTPVIVALFPNFREN----------GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
++ T IV N N G +G ++ T R L AE+LD T++++
Sbjct: 156 QLMATGAIVLENNNKGGNAGKCMISGGQGIRVGFAALNTTLRTLTYAEYLDTLQLTSLDA 215
Query: 184 ALVALGCKECLLPTEAVKSSECK-----------------------TLRDALTRC----- 215
+ KE + + S C+ +LR C
Sbjct: 216 LMAQCNLKELIY----LDKSRCRGGSNSDRGGGAAGVAGGSGREEESLRAVKQLCERAKI 271
Query: 216 -------------------GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI 256
+ L R++ D + L+ ++R V R +S +
Sbjct: 272 TYRELGHNGAAPSHDSPQKPLQLQGRREGNVTKGDFLSALEDILR--VPEDRLALSNCPL 329
Query: 257 APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF-- 314
A A+ L+S D +N+ +Y++ ++M+LD+AA++AL+++ K +A +
Sbjct: 330 ASRAIEYLVSNIIDNFDATNHRAFYLKHTIPSTFMKLDTAAIQALHIIHQKPEARGSLPT 389
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKR 373
S++ +NR C GMG R++ WL QPL + +IN RL +V+ V+D+ LR L Q L+
Sbjct: 390 SVYSWLNR-CVTGMGSRMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRC 448
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG-QFSSLIKERYLDPLES 432
D++RL L++R L+ + + +P L+ ++G + L+ + Y+ PLE
Sbjct: 449 CGDMDRLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLED 508
Query: 433 LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
+ ++H + L+ +VDL + I+ +D L L+ +++S+ + I S H++
Sbjct: 509 I--NEHFSNLRILITATVDLS--DENTTRINPEFDDELMELEEQRKSVVKAIESEHQRVM 564
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+K LK + T +G+VFR+T+KE+ ++R + + I + T KDGV+F + +L
Sbjct: 565 KVYGW-TEKQLKCEYHTTYGYVFRVTRKEDQQVRT--SKELITVSTSKDGVRFVSERLSS 621
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
L +QY+ + + Y Q++L +++ T VT+ + +++ LDV +++A + P P
Sbjct: 622 LSEQYKGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHP 681
Query: 613 YTRPDINPPDVGD--------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGP 664
RP I P+ + I L RHP VE + V + PN +L + IITGP
Sbjct: 682 MVRPTIRTPETEEEQEGNKSLITLLNVRHPLVELRQPV-YTPNTLRLTDDANAL-IITGP 739
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NMGGKSTF+R VG+ +++AQ G FVP D A + RD + RVGA D +GVSTFM EML
Sbjct: 740 NMGGKSTFMRSVGICVVLAQAGCFVPADSADVVTRDAVMCRVGATDHLAQGVSTFMVEML 799
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
E+A+IL AT SL IIDELGRGTSTYDGFGLAWAI + + + R+ LF+THFHE+T L
Sbjct: 800 ESAAILNAATRDSLAIIDELGRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQL 859
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
A + N V N H A +++ L Y++EPG C +S+G++VA+ AN PE
Sbjct: 860 AEHHTN---------VRNAHFGAEVNTVEGTLRFSYRLEPGPCGRSYGLYVAQLANLPEE 910
Query: 845 VVTLAREKAAELEDF 859
VV A+ KAA LE F
Sbjct: 911 VVQSAKCKAAGLETF 925
>gi|260081895|gb|ACX31303.1| MSH2 [Trypanosoma cruzi]
Length = 960
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 289/911 (31%), Positives = 460/911 (50%), Gaps = 100/911 (10%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH---GENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
+F +D VR F R G A FIA+ Y +T L+ G + + S
Sbjct: 12 AFTAVGGDDKACVRLFSRGGSTPGCYVLGSWAGFIAREYIRSTAVLKNWGGVDVVVVNDS 71
Query: 80 VSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLF----ANN 133
++K + RD LL R ++E YE G + V+ G+PGN+ +E LF A
Sbjct: 72 IAKE----VIRDCLLRR-GASVEYYERPPGGGAYACVQRGSPGNITDFEATLFSFEEAEI 126
Query: 134 EMQDTPVIVALFPNFREN----------GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
++ T IV N N G +G ++ T R L AE+LD T++++
Sbjct: 127 QLMATGAIVLENNNTSGNAGKCMVSGGQGIRVGFAALNTTLRTLTYAEYLDTLQLTSLDA 186
Query: 184 ALVALGCKECLL-------------------PTEAVKSSECKTLRDALTRC--------- 215
+ KE + E ++LR C
Sbjct: 187 LMAQCNLKELIYLDRSRCRSSSNSDKAGRAAGVAGGSGREEESLRAVKQLCERANITYRE 246
Query: 216 ---------------GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGA 260
+ L R++ D + L+ ++R V R +S +A A
Sbjct: 247 LGHNGAAPSHDSPQKPLQLQGRREGNVTKGDFLSALEDILR--VPEDRLALSNSPLASRA 304
Query: 261 LGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFG 318
+ L+S D +N+ +Y++ ++M+LD+AA++AL+++ K +A + S++
Sbjct: 305 IEYLVSNIIDNFDATNHRAFYLKHTIPSTFMKLDTAAIQALHIIHQKPEARGSLPTSVYS 364
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDI 377
+NR C GMG R++ WL QPL + +IN RL +V+ V+D+ LR L Q L+ D+
Sbjct: 365 WLNR-CVTGMGSRMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRCCGDM 423
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG-QFSSLIKERYLDPLESLTDD 436
+RL L++R L+ + + +P L+ ++G + L+ + Y+ PLE + +
Sbjct: 424 DRLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDI--N 481
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
+H + L+ +VDL + I+ +D L L+ +++S+ + I S H++
Sbjct: 482 EHFSNLRILITATVDLS--DENTTRINPEFDDELMELEEQRKSVVKTIESEHQRLMKVYG 539
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+K LK + T +G+VFR+T+KE+ ++R + + I + T KDGV+F + +L L +Q
Sbjct: 540 W-TEKQLKCEYHTTYGYVFRVTRKEDQQVRT--SKELITVSTSKDGVRFVSERLSSLSEQ 596
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
Y+ + + Y Q++L +++ T VT+ + +++ LDV +++A + P P RP
Sbjct: 597 YKGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRP 656
Query: 617 DINPPDVGD--------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
I P+ + I L RHP VE + V + PN +L + IITGPNMGG
Sbjct: 657 TIRTPETEEEQEGNKSLITLINVRHPLVELRQPV-YTPNTLRLTDDANAL-IITGPNMGG 714
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KSTF+R VG+++++AQ G FVP D A + RD + RVGA D +GVSTFM EMLE+A+
Sbjct: 715 KSTFMRSVGISVVLAQAGCFVPADSADMVTRDAVMCRVGATDHLAQGVSTFMVEMLESAA 774
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL AT SL +IDELGRGTSTYDGFGLAWAI + + + R+ LF+THFHE+T LA +
Sbjct: 775 ILNAATRDSLAVIDELGRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLAEHH 834
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
N V N H A +++ L Y++EPG C +S+G++VA+ AN PE VV
Sbjct: 835 TN---------VRNAHFGAEVNTVEGTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQS 885
Query: 849 AREKAAELEDF 859
A+ KAA LE F
Sbjct: 886 AKCKAAGLETF 896
>gi|407409912|gb|EKF32562.1| DNA mismatch repair protein MSH2, putative [Trypanosoma cruzi
marinkellei]
Length = 960
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 292/911 (32%), Positives = 461/911 (50%), Gaps = 100/911 (10%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH---GENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
+F +D VR F R G A FIA+ Y +T L+ G + + S
Sbjct: 12 AFTAVGGDDKACVRLFSRGGSTPGCYVLGSWAGFIAREYIRSTAVLKNWGGVDVVVVNDS 71
Query: 80 VSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLF----ANN 133
++K + RD LL R ++E YE G + V+ G+PGN+ +E LF A
Sbjct: 72 IAKE----VIRDCLLRR-GVSVEYYERPPGGGTYACVQRGSPGNITDFEATLFSFEEAEI 126
Query: 134 EMQDTPVIVALFPNFREN----------GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
++ T IV N N G +G ++ T R L AE+LD T++++
Sbjct: 127 QLMATGAIVLENNNKSGNAGKCMVSGGQGIRVGFAALNTTLRTLTYAEYLDTLQLTSLDA 186
Query: 184 ALVALGCKECLLPTEAVKSS-------------------ECKTLRDALTRC--------- 215
+ KE + SS E ++LR C
Sbjct: 187 LMAQCNLKELIYLDRGRGSSSINSNKGGGAAGVAGGSGREEESLRAVKQLCERANINYRE 246
Query: 216 ---------------GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGA 260
+ L ++ D + L+ ++R V R +S +A A
Sbjct: 247 LGQNGTVPSHDSPQKPLQLQGGREGNLTKGDFLSALEDILR--VPEDRLALSSCPLASRA 304
Query: 261 LGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFG 318
+ L+S D +N+ +Y++ ++M+LD+AA++AL+++ K +A + S++
Sbjct: 305 IEYLVSNIIDNFDATNHRAFYLKHTIPSTFMKLDTAAIQALHIIHQKPEARGSLPTSVYS 364
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDI 377
+NR C GMG R++ WL QPL + +IN RL +V+ V+D+ LR L Q L+ D+
Sbjct: 365 WLNR-CVTGMGSRMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRCCGDM 423
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG-QFSSLIKERYLDPLESLTDD 436
+RL L++R L+ + + +P L+ ++G + L+ + Y+ PLE + +
Sbjct: 424 DRLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLRSHQGGRNDKLLMDEYIAPLEDI--N 481
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
+H + L+ +VDL + I+ +D L L+ +++S+ + I S H Q L
Sbjct: 482 EHFSNLRILITATVDLS--DENTTRINPEFDDELMELEEQRKSVVKAIESEH-QRVMKLY 538
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+K LK + T +G+VFR+T+KE+ ++R + + I + T KDGV+F + +L L +Q
Sbjct: 539 GWTEKQLKCEYHTTYGYVFRVTRKEDQQVRT--SKELITVSTSKDGVRFVSERLSSLSEQ 596
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
Y+ + + Y Q++L +++ T VT+ + +++ LDV +++A + P P RP
Sbjct: 597 YKGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRP 656
Query: 617 DINPPDVGD--------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
I P+ + I L RHP VE + V + PN +L + IITGPNMGG
Sbjct: 657 TIRSPETKEEQEGNKSLITLINVRHPLVELRQPV-YTPNTLRLTDDANAL-IITGPNMGG 714
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KSTF+R VG+ +++AQ G FVP D A + RD + RVGA D +GVSTFM EMLE+A+
Sbjct: 715 KSTFMRSVGICVVLAQAGCFVPADSADMVTRDAVMCRVGATDHLAQGVSTFMVEMLESAA 774
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL AT SL IIDELGRGTSTYDGFGLAWAI + + + R+ LF+THFHE+T L+ +
Sbjct: 775 ILNAATRDSLAIIDELGRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLSEHH 834
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
+N V N H A +++ L Y++EPG C +S+G++VA+ AN PE VV
Sbjct: 835 SN---------VRNAHFGADVNTVEGTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQS 885
Query: 849 AREKAAELEDF 859
A+ KAA LE F
Sbjct: 886 AKCKAAGLETF 896
>gi|407849323|gb|EKG04099.1| DNA mismatch repair protein MSH2, putative [Trypanosoma cruzi]
Length = 959
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 288/910 (31%), Positives = 460/910 (50%), Gaps = 99/910 (10%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH---GENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
+F +D VR F R G A FIA+ Y +T L+ G + + S
Sbjct: 12 AFTAVGGDDKACVRLFSRGGSTPGCYVLGSWAGFIAREYIRSTAVLKNWGGVDVVVVNDS 71
Query: 80 VSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLF----ANN 133
++K + RD LL R ++E YE G + V+ G+PGN+ +E LF A
Sbjct: 72 IAKE----VIRDCLLRR-GASVEYYERPPGGGAYACVQRGSPGNITDFEATLFSFEEAEI 126
Query: 134 EMQDTPVIVALFPNFREN----------GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
++ T IV N N G +G ++ T R L AE+LD T++++
Sbjct: 127 QLMATGAIVLENNNTSGNAGKCMVSGGQGIRVGFAALNTTLRTLTYAEYLDTLQLTSLDA 186
Query: 184 ALVALGCKECLL-------------------PTEAVKSSECKTLRDALTRC--------- 215
+ KE + E ++LR C
Sbjct: 187 LMAQCNLKELIYLDRSRCRSSSNSDKAGRAAGVAGGSGREEESLRAVKQLCERANITYRE 246
Query: 216 --------------GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL 261
+ L R++ D + L+ ++R V R +S +A A+
Sbjct: 247 LGHNGAAPYDSPQKPLQLQGRREGNVTKGDFLSALEDILR--VPEDRLALSNSPLASRAI 304
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--SLFGL 319
L+S D +N+ +Y++ ++M+LD+AA++AL+++ K +A + S++
Sbjct: 305 EYLVSNIIDNFDATNHRAFYLKHTIPSTFMKLDTAAIQALHIIHQKPEARGSLPTSVYSW 364
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIE 378
+NR C GMG R++ WL QPL + +IN RL +V+ V+D+ LR L Q L+ D++
Sbjct: 365 LNR-CVTGMGSRMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRCCGDMD 423
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG-QFSSLIKERYLDPLESLTDDD 437
RL L++R L+ + + +P L+ ++G + L+ + Y+ PLE + ++
Sbjct: 424 RLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDI--NE 481
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
H + L+ +VDL + I+ +D L L+ +++S+ + I S H++
Sbjct: 482 HFSNLRILITATVDLS--DENTTRINPEFDDELMELEEQRKSVVKAIESEHQRLMKVYGW 539
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
+K LK + T +G+VFR+T+KE+ ++R + + I + T KDGV+F + +L L +Q+
Sbjct: 540 -TEKQLKCEYHTTYGYVFRVTRKEDQQVRT--SKELITVSTSKDGVRFVSERLSSLSEQH 596
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ + + Y Q++L +++ T VT+ + +++ LDV +++A + P P RP
Sbjct: 597 KGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVRPT 656
Query: 618 INPPDVGD--------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
I P+ + I L RHP VE + V + PN +L + IITGPNMGGK
Sbjct: 657 IRTPETEEEQEGNKSLITLINVRHPLVELRQPV-YTPNTLRLTDDANAL-IITGPNMGGK 714
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
STF+R VG+++++AQ G FVP D A + RD + RVGA D +GVSTFM EMLE+A+I
Sbjct: 715 STFMRSVGISVVLAQAGCFVPADSADMVTRDAVMCRVGATDHLAQGVSTFMVEMLESAAI 774
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENA 789
L AT SL +IDELGRGTSTYDGFGLAWAI + + + R+ LF+THFHE+T LA +
Sbjct: 775 LNAATRDSLAVIDELGRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLAEHHT 834
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
N V N H A +++ L Y++EPG C +S+G++VA+ AN PE VV A
Sbjct: 835 N---------VRNAHFGAEVNTVEGTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVVQSA 885
Query: 850 REKAAELEDF 859
+ KAA LE F
Sbjct: 886 KCKAAGLETF 895
>gi|401406844|ref|XP_003882871.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
gi|325117287|emb|CBZ52839.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
Length = 922
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 269/735 (36%), Positives = 399/735 (54%), Gaps = 87/735 (11%)
Query: 193 CLLPTEAVKSSEC-----KTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPV 247
C++ TEA SSE K L D + C K+ T L +DL L+ + +
Sbjct: 97 CVISTEAGGSSEAGDGWRKKLEDLVASCDADFVRVKRNTADTASLHEDLATLLIED-DSI 155
Query: 248 RDLVS---GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL 304
++ +S + A GA ALLS+A LLSD+ + Y LDSY+R+D+AA AL +
Sbjct: 156 KNHISRELQLKTACGACAALLSHARLLSDDMYIRQCTLEMYPLDSYLRIDNAAAAALYLF 215
Query: 305 ESKTDANKNFSL-------------------------------FGLMNRTCTAGMGKRLL 333
S + +L F LM+R CT+ +G R L
Sbjct: 216 PSAQQKAQQLTLLPVSAKAGGSGASRASSLACALSAGGGISSVFALMSRWCTSQLGSRRL 275
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTAL-RQDLRQHLKRISDIERL---MHNLEK--- 386
+ QPL+D +I R DIV+ F D A RQ H K + D++RL H L
Sbjct: 276 FTCMSQPLVDREKIERRYDIVELFQTDEAFRRQVFCSHFKHVFDLDRLAGRFHRLASSTK 335
Query: 387 --------RRAG---------LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
R+ G L+ +VKLY ++ + +AL+ Y G + + + +P
Sbjct: 336 DLDANEAPRKKGSIFARVKLTLEDLVKLYDCAVECTSLEAALRGYSGVHRDALAKAFSEP 395
Query: 430 LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
L + FI LVE ++D+D+ + G ++IS ++ L+AL +++E L R++ +
Sbjct: 396 LAEIVKS--FATFINLVEFTIDMDEAKRGVFVISRRFEPELAALLDKKEDLRRRMER-ER 452
Query: 490 QTASDLDLPVD------KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
Q A D ++P + +KL + G V R+TKK++P + ++ + K
Sbjct: 453 QKAED-EIPFSGRKRDAEIVKLIEDNTMGFVLRVTKKDQPAVLGA-RGRYHQVRLNKSEF 510
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
FT +L+ L +++ V E Y+ QK LV + + A ++ + + LA +L LDVL +FA
Sbjct: 511 IFTTAELRGLCREFKDVSEAYEEMQKSLVEKALLVAASYWPLVERLAELLGMLDVLGAFA 570
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW-VNFIPNDCKLIRGKSWFQIIT 662
A++ P PY RP I + G ++L+ SRHP +E Q +FI ND L + IIT
Sbjct: 571 AAANAAPIPYVRPKIVEDESG-LVLKASRHPLLEIQPGSSSFISNDVHLDPTQRLI-IIT 628
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKST+IRQV + +L+AQ+GSFVPCD + + + RVGA D QLRGVSTF+ E
Sbjct: 629 GPNMGGKSTYIRQVALAVLLAQMGSFVPCDSCQLPIFKQVICRVGASDIQLRGVSTFLAE 688
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
M+E ++IL+ A +SL++IDELGRGTSTY+GFGLAWAI +HL E++ LFATHFHE+
Sbjct: 689 MVEASAILRNADTKSLVVIDELGRGTSTYEGFGLAWAIAKHLASEVKCLCLFATHFHEMG 748
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L+ E + GV+N HVSA ++ +++L LY++EPG DQS+G+HVA FA P
Sbjct: 749 QLSEE---------VHGVSNVHVSAAVNKETQQLAFLYRLEPGCIDQSYGVHVASFAGLP 799
Query: 843 ESVVTLAREKAAELE 857
SVV AR+K+AELE
Sbjct: 800 ASVVERARKKSAELE 814
>gi|340057676|emb|CCC52022.1| putative DNA mismatch repair protein, fragment [Trypanosoma vivax
Y486]
Length = 963
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 300/955 (31%), Positives = 494/955 (51%), Gaps = 122/955 (12%)
Query: 30 NDTRAVRFFDRRDY-YTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETI 88
+DT +R F R G A+ +A+ Y +T L+ G G DA V+V+ + +
Sbjct: 67 DDTSCLRLFSRAATGCCVVGRWASVVAREYVKSTAVLKNWG-GVDA---VTVNDTIAREV 122
Query: 89 ARDLLLERTDHTLELYEG--SGSNWRLVKSGTPGNLGSYEDVLFANNE-----MQDTPVI 141
RD LL R ++E YE SG + V+ G+PG++ +E LFA E M V+
Sbjct: 123 IRDCLLRR-GVSVEHYERQVSGGPYVCVQRGSPGHIADFEATLFAFEEAEIQLMATGSVV 181
Query: 142 VALFPN--FRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEA 199
+ + F +G ++ T R + A + ++E ++ AL
Sbjct: 182 IGHVSSGVFAGQSLRVGFAALNTTLRTVSQAS----ASSVDMEESMRAL----------- 226
Query: 200 VKSSECKTLRDALTRCG-----------VMLTERKKTEFKTRDLVQDLDRLVRGSVEPV- 247
C+ +L CG V ++++K K + +D+D L ++E +
Sbjct: 227 --KQICERSNISLRPCGRGSAFPSQENFVQHSQQQKVPMKNEAMQRDMDLL--ATLENIL 282
Query: 248 -----RDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
R ++ F +A AL L++ D +N YYI+ ++M+LD+AA+ AL+
Sbjct: 283 RVPEDRFALTQFPLASRALEQLITSMIDPFDLTNRCAYYIKHTVPSTFMKLDAAAIDALH 342
Query: 303 VLESKTDANKNF--SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
++ K +A + S++ +NR CT GMG R++ WL QPL +V++IN RL +V+ +
Sbjct: 343 IINHKQEARGSLPTSVYSWLNR-CTTGMGARMMRQWLLQPLRNVDDINERLSLVEMMNES 401
Query: 361 TALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQF 418
LR L H L+R +D++RL L++R L+ + + +P+ L+ Y G+
Sbjct: 402 PILRDSLVSHVLRRCNDMDRLNRKLQRRTLSLKDVQCILVFVDTIPHAIEVLRTYSRGRN 461
Query: 419 SSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQE 478
+ L+ + Y+ PLE + ++H + L+ +++LD + I+ +D+ L L+ +++
Sbjct: 462 TKLLLDEYVAPLEDI--NEHFSNLRTLINATINLD--DENVARINPEFDSDLGELEKQRQ 517
Query: 479 SLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLET 538
S+ I H++ + +K +K + +G+VFR+++K++ ++R + + I + T
Sbjct: 518 SVVEAIDKEHRRVMREHKW-TEKTVKCEYHATYGYVFRVSRKDDQQVRT--SDKLITVST 574
Query: 539 RKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDV 598
KDGV+F + L L +QY+ + +Y Q++L ++I T T+ + +++ L
Sbjct: 575 AKDGVRFLSGALSSLNEQYKGICRDYDMRQQDLKQKLIDTVATYLPVLDDAKELIAALGR 634
Query: 599 LLSFADLASSCPTPYTRPDINPPDVGD-------------------IILEGSRHPCVEAQ 639
+ P P RP + + + + +RHP VE +
Sbjct: 635 V-------RDSPLPMVRPTVRQVRSEEEAQSNSNGGGSPGSSENSVLTIVNARHPLVELR 687
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
N++PN +L + +ITGPNMGGKSTF+R +G+ +++AQ G FVP + A I VR
Sbjct: 688 Q-PNYVPNTLQLTADSNAI-VITGPNMGGKSTFMRSIGICVVLAQAGCFVPAEAADIVVR 745
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D I RVGA D +GVSTFM EMLE+A+IL AT +L IIDELGRGTSTYDGFGLAWA
Sbjct: 746 DAIMCRVGAMDHLAQGVSTFMVEMLESAAILNCATQNTLAIIDELGRGTSTYDGFGLAWA 805
Query: 760 ICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTML 819
I + + I++ LF+THFHE+T LA++++N V N H A +D+ S L
Sbjct: 806 IAQEVAVGIKSTLLFSTHFHEMTRLANQHSN---------VRNAHFGADVDTKSGTLRFS 856
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR 879
Y+++PGAC++S G++VA+ A+ PE VV AR KAAELEDF D+A+ +R R
Sbjct: 857 YQLQPGACERSCGLYVAQLAHIPEEVVNAARRKAAELEDFE-----EDEAR-----RRTR 906
Query: 880 I----SDPNDMSRGA--ARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDA 928
+ P M R A AR Q L+ ++ +E KEAL KR++ ++ DA
Sbjct: 907 TLLASATPEMMQRVAQYARRVQALESGAESGVE----KEALR--KRLRAEIRDDA 955
>gi|9864530|gb|AAG00261.1| MSH2 [Trypanosoma cruzi]
Length = 962
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 294/913 (32%), Positives = 462/913 (50%), Gaps = 102/913 (11%)
Query: 23 SFYKTLPNDTRAVRFFDRRDYYTAH---GENATFIAKTYYHTTTALRQLGTGSDALSSVS 79
+F +D VR F R G A FIA+ Y +T L+ G + + S
Sbjct: 12 AFTAVGGDDKACVRLFSRGGSTPGCYVLGSWAGFIAREYIRSTAVLKNWGGVDVVVVNDS 71
Query: 80 VSKNMFETIARDLLLERTDHTLELYE--GSGSNWRLVKSGTPGNLGSYEDVLF----ANN 133
++K + RD LL R ++E YE G + V+ G+PGN+ +E LF A
Sbjct: 72 IAKE----VIRDCLLRR-GASVEYYERPPGGGTYACVQRGSPGNITDFEATLFSFEEAEI 126
Query: 134 EMQDTPVIVALFPNFREN----------GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
++ T IV N N G +G ++ T R L AE+LD T++++
Sbjct: 127 QLMATGAIVLENNNKGGNAGKCMISGGQGIRVGFAALNTTLRTLTYAEYLDTLQLTSLDA 186
Query: 184 ALVALGCKECLL---------------------------PTEAVKSSE--CKTLRDALTR 214
+ KE + V E C +++ LTR
Sbjct: 187 LMAQCNLKELIYLDKSRCRGGSNSDRGGGAAGVCRRKRARRRVVTGGETSCVSVQRLLTR 246
Query: 215 ---------------CGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPG 259
+ L R++ D + L+ ++R V R +S +A
Sbjct: 247 ELGHNGAAPSHDSPQKPLQLQGRREGNVTKGDFLSALEDILR--VPEDRLALSNCPLASR 304
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF--SLF 317
A+ L+S D +N+ +Y++ ++M+LD+AA++AL+++ K +A + S++
Sbjct: 305 AIEYLVSNIIDNFDATNHRAFYLKHTIPSTFMKLDTAAIQALHIIHQKPEARGSLPTSVY 364
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISD 376
+NR C GMG R++ WL QPL + +IN RL +V+ V+D+ LR L Q L+ D
Sbjct: 365 SWLNR-CVTGMGSRMMRQWLLQPLRNAEDINQRLSLVELMVEDSILRDALLSQVLRCCGD 423
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG-QFSSLIKERYLDPLESLTD 435
++RL L++R L+ + + +P L+ ++G + L+ + Y+ PLE +
Sbjct: 424 MDRLNRKLQRRSIALKDLQSILTFVNTIPRAVQVLRTHQGGRNDKLLMDEYIAPLEDI-- 481
Query: 436 DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
++H + L+ +VDL + I+ +D L L+ +++S+ + I S H++
Sbjct: 482 NEHFSNLRILITATVDLS--DENTTRINPEFDDELMELEEQRKSVVKAIESEHQRVMKVY 539
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+K LK + T +G+VFR+T+KE+ ++R + + I + T KDGV+F + +L L +
Sbjct: 540 GW-TEKQLKCEYHTTYGYVFRVTRKEDQQVRT--SKELITVSTSKDGVRFVSERLSSLSE 596
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
QY+ + + Y Q++L +++ T VT+ + +++ LDV +++A + P P R
Sbjct: 597 QYKGIRKVYDVRQQDLKQKLVSTVVTYLPVLDDAKELIAALDVFVAWATVVRDSPHPMVR 656
Query: 616 PDINPPDVGD--------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMG 667
P I P+ + I L RHP VE + V + PN +L + IITGPNMG
Sbjct: 657 PTIRTPETEEEQEGNKSLITLLNVRHPLVELRQPV-YTPNTLRLTDDANAL-IITGPNMG 714
Query: 668 GKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
GKSTF+R VG+ +++AQ G FVP D A + RD + RVGA D +GVSTFM EMLE+A
Sbjct: 715 GKSTFMRSVGICVVLAQAGCFVPADSADVVTRDAVMCRVGATDHLAQGVSTFMVEMLESA 774
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHE 787
+IL AT SL IIDELGRGTSTYDGFGLAWAI + + + R+ LF+THFHE+T LA
Sbjct: 775 AILNAATRDSLAIIDELGRGTSTYDGFGLAWAIAQEVAVKARSALLFSTHFHEMTQLA-- 832
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSR-KLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
E +TK A A + SR L Y++EPG C +S+G++VA+ AN PE VV
Sbjct: 833 ---EHHTK----CAGMRTLAPKSTQSRGTLRFSYRLEPGPCGRSYGLYVAQLANLPEEVV 885
Query: 847 TLAREKAAELEDF 859
A+ KAA LE F
Sbjct: 886 QSAKCKAAGLETF 898
>gi|312072119|ref|XP_003138920.1| MutS domain III family protein [Loa loa]
gi|307765917|gb|EFO25151.1| MutS domain III family protein [Loa loa]
Length = 879
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 277/845 (32%), Positives = 443/845 (52%), Gaps = 46/845 (5%)
Query: 35 VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLL 94
V F+R ++Y + ++A FIA + + + LR+ G L ++ + + D++L
Sbjct: 20 VVIFERNEFYACYEDDAIFIANSIFCSEVGLRRCRIGETELMYHVLNNAQYLRVVHDVIL 79
Query: 95 ERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALF--PNFRENG 152
+ + +E+Y + W L G+ G L +E+++ + E+ + + AL +
Sbjct: 80 VQ-HYRVEVYAANDGQWELKAKGSLGCLNDFEEIVGDSAELYELTTVAALTVTEGHDSSE 138
Query: 153 CTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSS------ECK 206
C + + ++ + L +AEFLD HF N+E L AL +ECLL ++ + S E
Sbjct: 139 CLVSVVSCNVREMQLTIAEFLDTEHFVNLEKCLAALVPRECLLVSDKMGISSVSLCGENN 198
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLS 266
L AL + G+ RK+ + L L + ++P + L L+
Sbjct: 199 QLNTALKKAGI----RKELFQFSEQLPTTLSNHITEMIDPKYKDIRLSRAQKNCLVGLIQ 254
Query: 267 YAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL----ESKTDANKNFSLFGLMNR 322
+ L D G + +R Y YM L+SAA++AL + E + + SL+ L+N+
Sbjct: 255 HLHLNDDGVMSGKFQLRNYKSAGYMYLNSAAVKALELFAACQEDEDLLDDVGSLYELLNK 314
Query: 323 TCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLM 381
C G+RLL W+++PL D+ +IN RLD+V+A V+++ R L L+RI DI +
Sbjct: 315 -CRTPQGQRLLRDWIRRPLHDIRKINERLDVVEALVNNSLCRAILHDDILRRIPDITTIT 373
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE---GQFSSLIKERYLDPLESLTDDDH 438
L +++AGLQ+ +LYQ L L + G +S + + L+PL
Sbjct: 374 RKLLQKKAGLQECYRLYQIIRLLKRFHQVLDELHASCGSLASSVNDLCLEPLA--LAQLQ 431
Query: 439 LNKFIALVETSVDLDQL-ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
KF+AL+E++VD+ ENG Y I + D L A+ + +E + ++L K+ S
Sbjct: 432 FEKFMALIESTVDVAYFKENGLYRILPNIDENLLAVAERMDEIETKCNALLKKVCS---- 487
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK-DGVKFTNTKLKKLGDQ 556
+ +A+KL+ G FR+T K E IR+ + +LET K GV FT L L +
Sbjct: 488 GITEAVKLENTEHHGFHFRVTLKAEKSIRQ---SDMRILETSKGSGVHFTCDDLDILNRE 544
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
Y K+ Y+ Q ++ V++T + F L+ ++ +D L++ + LAS P + RP
Sbjct: 545 YLKLSSHYEAIQSSFIDMVVETCSGYVSTFCELSETVAIIDTLVALSILASGSPFCFVRP 604
Query: 617 DINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGK---SWFQIITGPNMGGKSTF 672
I D + L RHP +EA + FI ND L R + + F ++TG NMGGKST+
Sbjct: 605 QILDEDKQILELRKCRHPVMEANPNSSQFICNDVILGREQGDGAMFLVLTGANMGGKSTY 664
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+R +++L+AQ+GSFVPC+ A S+ D I R+G+ D Q +GVSTFM EM + ASIL+
Sbjct: 665 LRCCALSVLLAQIGSFVPCESARFSLIDGIHTRIGSCDYQCKGVSTFMAEMNDCASILES 724
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT SL+I+DELGRGTSTYDGFGLAWAI E +V ++ ++ATH+HELT L+
Sbjct: 725 ATCHSLVIVDELGRGTSTYDGFGLAWAIAEDIVSRVKCFCIYATHYHELTRLS-----RV 779
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
KQ+ V ++ ID +L +LYK+ PG +SFG+++ + P SV+ A +
Sbjct: 780 YPKQLKNVCT---ASQIDENG-QLILLYKIIPGVAGRSFGLNIGKMIGLPNSVLQTASDM 835
Query: 853 AAELE 857
LE
Sbjct: 836 LERLE 840
>gi|124808862|ref|XP_001348428.1| DNA mismatch repair protein Msh2p, putative [Plasmodium falciparum
3D7]
gi|23497322|gb|AAN36867.1|AE014820_17 DNA mismatch repair protein Msh2p, putative [Plasmodium falciparum
3D7]
gi|29650348|gb|AAO86764.1| DNA mismatch repair enzyme [Plasmodium falciparum]
Length = 811
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 257/755 (34%), Positives = 414/755 (54%), Gaps = 61/755 (8%)
Query: 141 IVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLL-PTEA 199
I+ L+ + ++ ++G+ + + K + EF+D+ HFT +ES + +C T
Sbjct: 14 ILCLYIDTKKYQKSLGVCFYNYLKYEFLMTEFIDNGHFTALESLFIQKRPHKCFFNSTND 73
Query: 200 VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI--A 257
+ E L + C V +K ++ +L +L +L+ + VR+ E+ A
Sbjct: 74 LVDDE--RLLNLFKICNVQAIPLEKKKYDATNLKDEL-KLIISHNDDVRNYDKHLELENA 130
Query: 258 PGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA---NKNF 314
L L++Y +L ++ + I +++D YMRLD AA+ ALN+L +K + N N
Sbjct: 131 CKCLMVLINYLKLKENQDIHNQCKINIHNMDLYMRLDKAAISALNILPNKKNIHSYNNNT 190
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFV-DDTALRQDLRQHLKR 373
SL +++ C +G + L WL QPL +V EIN RL+IV+ F+ +D A +LKR
Sbjct: 191 SLLKFLDK-CNTTIGSKKLVSWLTQPLTNVAEINKRLNIVEFFIKEDDARNVIFCNYLKR 249
Query: 374 ISDIERLMHNLEKRRAG--------------LQQIVKLYQSSIRLPYIRSALQQYEGQFS 419
I ++++L H L++ L+ IVK+Y S + I L+ +G+
Sbjct: 250 IPELDKLNHYLKEINQNNEIRVNSKYNEEMILKDIVKMYYSILDFKQIYFTLKPIQGKNK 309
Query: 420 SLIKERYLDPLESLTDDDHLNKF---IALVETSVDLDQL-ENGEYMISSSYDTGLSALKN 475
I E ++PL D LNKF + ++E ++DL+++ EN Y+IS+S+D L + N
Sbjct: 310 ETIDEIIINPLR-----DILNKFSKLLDMIEITIDLEEVQENKVYLISTSFDNELEIIAN 364
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKA-----------LKLDKGTQFGHVFRITKKEEPK 524
E+ +L ++I HK D+ DK ++L +FR+TKK+
Sbjct: 365 EKNALMKKIKK-HKDDVEK-DIFADKYDRTYKRANREDIRLVDCNTNVFLFRVTKKDCGL 422
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
+++ +++ + K+ FT LK L QY L Y Q E++N+ I T++
Sbjct: 423 VQQD-KKKYMTVRMNKNEFLFTTNTLKNLCKQYDHCLNIYNTLQSEIINKTICAVSTYTP 481
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG-DIILEGSRHPCVEAQ-DWV 642
+ + ++S LDVL+SF+ + + P PY RP I D G ++I+ SRHP +E Q +
Sbjct: 482 VIEKFIDLVSTLDVLISFSVVCHNSPFPYVRPVI--VDHGENVIMRKSRHPLLELQYNLN 539
Query: 643 NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCI 702
NFIPND + + S I+TGPNMGGKST+IRQ + ++AQ+G FVPCD + + I
Sbjct: 540 NFIPNDIHMNKKNSRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDFCEVPIFTQI 599
Query: 703 FARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICE 762
RVGA D QL+G+STF+ EM+E A+I+K A S II+DELGRGTSTY+G G++W+I +
Sbjct: 600 MCRVGASDFQLKGISTFLSEMIEAAAIVKNADQNSFIIVDELGRGTSTYEGLGISWSIGK 659
Query: 763 HLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKV 822
++++ I+ LFATHFHE++ +A+ Q GV N HV ID +K+ LY++
Sbjct: 660 YILDNIKCFCLFATHFHEMSNIAY---------QCEGVINRHVETTIDKEKKKICFLYEI 710
Query: 823 EPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ GA ++S+G++VAE A P+ V+ A EK ELE
Sbjct: 711 KDGASNKSYGVNVAEIAKLPKEVIQKAYEKVEELE 745
>gi|82913509|ref|XP_728672.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485142|gb|EAA20237.1| MutS homolog 2-related [Plasmodium yoelii yoelii]
Length = 853
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 257/802 (32%), Positives = 422/802 (52%), Gaps = 101/802 (12%)
Query: 135 MQD-TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKEC 193
M+D T ++V+L FR N +G+ + T L+E++++ HFT +ES L+
Sbjct: 1 MEDGTKLLVSLISEFRNNIRYVGICIYNNTTNEFSLSEYIENDHFTTLESILIQTNPDSL 60
Query: 194 L-LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS 252
+ LP + + K + C + L E K F+ + DL++L+ + + V++ VS
Sbjct: 61 IYLPCNNILDN--KRINLICNLCEIKLCELNKDIFQIMSIETDLEKLINVN-DDVKNYVS 117
Query: 253 GFEIAPG--ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+ G AL +++ Y LL+++S ++ Y++ Y++LD AA+ +LN+ +
Sbjct: 118 FLNLTLGCKALSSIIKYLNLLNEDSAINKCTLKWYNISKYVKLDKAAICSLNINTYISKE 177
Query: 311 NKN-----------------FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
KN +L+ +N+ C +G+R L W+ P+ D +IN RLD+
Sbjct: 178 QKNGIGGSQQTLSQNHGGNTMTLYKFLNK-CKTKIGERKLLKWIMHPIRDEKKINQRLDM 236
Query: 354 VQAFVDDTALRQDLR-QHLKRISDIERLMHNLE--------------------------K 386
V+ DD ALR ++ ++L+++ D++ ++ L+
Sbjct: 237 VEIMNDDQALRSMIQGEYLRKVCDLDLIIKKLKIANNIVKNNNMSDNHGAKQNRSFGNSN 296
Query: 387 RRAGLQQIVKLYQSSIRLPYIRSALQQYEG-----QFSSLIKERYLDPLESLTDDDHLNK 441
+ ++ +VKLY + I I AL +Y ++E ++ PL+S+ L
Sbjct: 297 NKCTIEDLVKLYDTVIASKNIYHALDEYNNGTQKKNTKKTLEENFIIPLKSIIIS--LTS 354
Query: 442 FIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDK 501
F+ L+E +VD DQ+ +++IS ++D L AL E+E + +QI LH ++ + D+ K
Sbjct: 355 FLKLIELTVDFDQIIKNQFLISPNFDDNLMALSKEKEEIYKQI--LHHRSEVEEDINYLK 412
Query: 502 A---------------------LKLDKGTQFGHVFRITKKEEPKI--RKKLTTQFIVLET 538
+KL +FR KK+ I RKK Q +
Sbjct: 413 KGDKQSKNNKNISSNNSGMKEDVKLIDCNTNVFLFRAVKKDIIFIQQRKKTYNQ---VRV 469
Query: 539 RKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDV 598
K+ + F KL+ L QYQ VL Y Q+ L N+ I+ A ++ E F L+ ++S++D+
Sbjct: 470 NKNEILFNTNKLRDLCKQYQYVLHSYNTSQEHLANKAIEVASSYWEPFNKLSKIISQIDI 529
Query: 599 LLSFADLASSCPTPYTRPDINPPDVGDII-LEGSRHPCVEAQ--DWVNFIPNDCKLIRGK 655
SFA + S C + Y RP + G ++ ++ SRHP VEA NFIPND + +
Sbjct: 530 FCSFAYVISQCISTYVRPIVEQN--GKVLEIKNSRHPLVEANYLQIKNFIPNDIHMDKEN 587
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
+ IITGPNMGGKST+IRQ+ + LMA +G FVP A I + I R+G+ D QL+G
Sbjct: 588 NRLNIITGPNMGGKSTYIRQIAIISLMAHIGCFVPSTYAKIPIFSQIMCRIGSSDIQLKG 647
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
+STF EM+E ++I+K A +L+IIDELGRGTSTY+GFG++W++ +L+ I+ LFA
Sbjct: 648 ISTFFSEMIEVSAIIKNADSDTLVIIDELGRGTSTYEGFGISWSVANYLLNNIKCLCLFA 707
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
THFHE++ L E+A V+N HVSA ID +K++ LY+++ G D+S+G+HV
Sbjct: 708 THFHEISNLEDEHA---------AVSNNHVSAKIDEAKKKISFLYEIKKGFADKSYGVHV 758
Query: 836 AEFANFPESVVTLAREKAAELE 857
A+ A P+ V+ + EK+ ELE
Sbjct: 759 AQIAKLPQKVIDKSFEKSKELE 780
>gi|68076057|ref|XP_679948.1| DNA mismatch repair protein [Plasmodium berghei strain ANKA]
gi|56500800|emb|CAH96197.1| DNA mismatch repair protein Msh2p, putative [Plasmodium berghei]
Length = 852
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 255/799 (31%), Positives = 421/799 (52%), Gaps = 101/799 (12%)
Query: 137 DTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL-L 195
DT ++V+L R N +G+ + T L+E++++ HFT +ES L+ + L
Sbjct: 4 DTKLLVSLISELRNNIRYVGICIYNSTTNEFSLSEYIENDHFTTLESILIQTDPDSLIYL 63
Query: 196 PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS--G 253
P + + K ++ C + L E K F+ + DL++L++ + + V++ VS
Sbjct: 64 PCNNILDN--KRIKLICNLCEIKLCELNKDIFQIMSIETDLEKLIKVN-DDVKNYVSFLN 120
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV---------- 303
+A AL +++ Y LL+++S ++ Y++ Y++LD AA+ +LN+
Sbjct: 121 LTLACKALSSIIKYLNLLNEDSAINKCTLKWYNISKYVKLDKAAICSLNINTYISKEQKN 180
Query: 304 -------LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+ S++ +L+ +N+ C +G+R L W+ P+ D +IN RLD+V+
Sbjct: 181 GIGGSQQMLSQSHGGNTMTLYKFLNK-CKTKIGERKLLKWIMHPIRDEKKINQRLDMVEI 239
Query: 357 FVDDTALRQDLR-QHLKRISDIERLMHNLE--------------------------KRRA 389
DD ALR ++ +L+++ D++ ++ L+ +
Sbjct: 240 MNDDQALRSMIQADYLRKVCDLDLIIKKLKIANNIIKNSNMSDNHGAIQNRSLGNSNNKC 299
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEG-----QFSSLIKERYLDPLESLTDDDHLNKFIA 444
++ +VKLY + + I AL +Y ++E ++ PL+S+ L F+
Sbjct: 300 TIEDLVKLYDTVVASKNIYHALDEYNNGTQKKNNKKTLEENFIIPLKSIIIS--LTSFLK 357
Query: 445 LVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA-- 502
L+E +VD DQ+ +++IS ++D L AL E+E + +QI LH + + D+ K
Sbjct: 358 LIELTVDFDQIIKNQFLISPNFDDNLMALSKEKEEIYKQI--LHHRAEVEEDINYLKKGD 415
Query: 503 -------------------LKLDKGTQFGHVFRITKKEEPKI--RKKLTTQFIVLETRKD 541
+KL +FR KK+ I RKK Q + K+
Sbjct: 416 KQSKNNKNISSNNSGMKEDVKLIDCNTNVFLFRAVKKDIIFIQQRKKTYNQ---VRVNKN 472
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
+ F KL+ L QYQ VL Y Q++L N+ I+ A ++ E F L+ ++S++D+ S
Sbjct: 473 EILFNTNKLRDLCKQYQYVLHSYNTSQEQLANKAIEVASSYWEPFNKLSKIISQIDIFCS 532
Query: 602 FADLASSCPTPYTRPDINPPDVGDII-LEGSRHPCVEAQ--DWVNFIPNDCKLIRGKSWF 658
FA + S C + Y RP + G I+ ++ SRHP VEA NFIPND + + +
Sbjct: 533 FAYVISQCISTYVRPIVEQH--GKILEIKNSRHPLVEANYLQTKNFIPNDIHMDKENNRL 590
Query: 659 QIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVST 718
IITGPNMGGKST+IRQ+ + LMA +G FVP A I + I R+G+ D QL+G+ST
Sbjct: 591 NIITGPNMGGKSTYIRQIAIISLMAHIGCFVPSTYAKIPIFSQIMCRIGSSDIQLKGIST 650
Query: 719 FMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHF 778
F EM+E ++I+K A D SL+IIDELGRGTSTY+GFG++W++ +L+ I+ LFATHF
Sbjct: 651 FFSEMIEVSAIIKNA-DSSLVIIDELGRGTSTYEGFGISWSVANYLLNNIKCLCLFATHF 709
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HE++ L E+ V+N HVSA ID +K++ LY+++ G D+S+G+HVA+
Sbjct: 710 HEISNLEDEHT---------AVSNNHVSAKIDEAKKKISFLYEIKKGFADKSYGVHVAQI 760
Query: 839 ANFPESVVTLAREKAAELE 857
A P+ V+ + EK+ ELE
Sbjct: 761 AKLPQKVIDKSFEKSKELE 779
>gi|156102010|ref|XP_001616698.1| DNA mismatch repair enzyme [Plasmodium vivax Sal-1]
gi|148805572|gb|EDL46971.1| DNA mismatch repair enzyme, putative [Plasmodium vivax]
Length = 810
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 251/768 (32%), Positives = 423/768 (55%), Gaps = 52/768 (6%)
Query: 141 IVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAV 200
I+ L+ + ++ T+G+ + + K + EF+D+ +FT +ES + +C +
Sbjct: 14 ILCLYIDTKKYQKTLGVCFYNYLKYEFLMTEFIDNGYFTALESLFIQKRPYKCFFNSMND 73
Query: 201 KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI--AP 258
+ + L + C + ++ ++ +L ++L +L+ + VR+ E+ A
Sbjct: 74 LVDD-ERLLNLFKMCNIEAVALERKKYDVSNLKEEL-KLIIPQNDDVRNYDKHLELENAC 131
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDAN---KNFS 315
L L+++ ++ ++ + I +++D YMRLD AA+ ALN+L +K + N N S
Sbjct: 132 KCLMVLINHLKVKENKDIHYQCSINIHNMDLYMRLDKAAISALNILPNKKNTNSYSNNTS 191
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRI 374
L +N+ C +G + L WL QPL V+EIN RL+IV+ F+++ LR + +LKRI
Sbjct: 192 LLKFLNK-CNTTIGCKKLMSWLTQPLTSVSEINKRLNIVETFIEEDDLRNSVYCNYLKRI 250
Query: 375 SDIERLMHNLEKRRAG--------------LQQIVKLYQSSIRLPYIRSALQQYEGQFSS 420
++++L H L++ L+ IVKLY + + I +L EG+
Sbjct: 251 PELDKLNHYLKEINQNNEIKGNSKYNEEMILKDIVKLYYAILDFKQIYFSLVSIEGKHKQ 310
Query: 421 LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQES 479
+ E ++PL + ++ +K + ++E ++DL ++E N Y+IS ++D L + NE+ +
Sbjct: 311 TVIEMVVNPLHEILNN--FSKLLDMIEMTIDLKEIEENKVYLISKNFDEELEEISNEKNA 368
Query: 480 LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV-----------FRITKKEEPKIRKK 528
L ++I HK+ + DL DK + K T + FR++KK+ I+ +
Sbjct: 369 LMKKIKR-HKEDV-ERDLFSDKCDRRYKRTNREDIRLVDCNTNVFLFRVSKKDSTLIQHQ 426
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+ I + K+ FT + LK L QY+ L Y Q E+V + I T++ + +
Sbjct: 427 --KKCISVRMNKNEFLFTTSTLKGLCKQYEHCLNIYNTLQLEIVKKTICAVSTYTPVIEK 484
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPN 647
++S LDVL+SFA + + P PY RP + D ++I++ SRHP +E Q + NFIPN
Sbjct: 485 FIDVVSTLDVLVSFAVVCYNSPFPYVRPTV-VEDGENVIMKKSRHPLLELQHNLSNFIPN 543
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
D + + +S I+TGPNMGGKST+IRQ + ++AQ+G FVPCD I V + RVG
Sbjct: 544 DIHMNKKESRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDFCEIPVFSQVMCRVG 603
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
A D QL+G+STF+ EM+E ++I+K A S II+DELGRGTSTY+G G++W+I +++++
Sbjct: 604 ASDFQLKGISTFLSEMIEASAIVKNADKNSFIIVDELGRGTSTYEGLGISWSIGKYILDH 663
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGAC 827
I+ LFATHFHE++ +A+ Q GV N HV ID +K+ LY+++ GA
Sbjct: 664 IKCFCLFATHFHEISNIAY---------QCEGVINRHVETTIDQKQKKICFLYEIKDGAS 714
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
++S+G++VAE A P+ V+ A EK ELE + + I+ S
Sbjct: 715 NKSYGVNVAEIAKLPKDVIQRAYEKVEELESAENKYYLKEKLNIDTSS 762
>gi|221060208|ref|XP_002260749.1| DNA mismatch repair protein, Msh2p homologue [Plasmodium knowlesi
strain H]
gi|193810823|emb|CAQ42721.1| DNA mismatch repair protein, Msh2p homologue,putative [Plasmodium
knowlesi strain H]
Length = 810
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 251/768 (32%), Positives = 424/768 (55%), Gaps = 52/768 (6%)
Query: 141 IVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT-EA 199
I+ L+ + ++ T+G+ + + K + EF+D+ +FT +ES L+ +C +
Sbjct: 14 ILCLYIDTKKYQKTVGVCFYNYLKYEFLMTEFIDNGYFTALESLLIQKRPYKCFFNSMND 73
Query: 200 VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI--A 257
V E L + C + + ++ ++ +L ++L +L+ + VR+ E+ A
Sbjct: 74 VVDDE--RLLNLFKMCNIEASTLERKKYDVSNLQEEL-KLIIPQNDDVRNYDKHLELQNA 130
Query: 258 PGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDAN---KNF 314
L L+++ ++ ++ + I +++D YMRLD AA+ ALN+L +K + N N
Sbjct: 131 CRCLMVLINHLKVKENKDIHNQCRINIHNMDLYMRLDKAAISALNILPNKKNTNSYSNNT 190
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKR 373
SL +N+ C +G + L WL QPL V EIN RL+IV+ F++D LR ++ +LKR
Sbjct: 191 SLLKFLNK-CNTTIGYKKLVSWLTQPLTSVAEINKRLNIVETFIEDDDLRNNVYCNYLKR 249
Query: 374 ISDIERLMHNLEKRRAG--------------LQQIVKLYQSSIRLPYIRSALQQYEGQFS 419
I ++++L H L++ L+ IVKLY + + I +L +G+
Sbjct: 250 IPELDKLNHYLKEINQNNELKGNSKYNEEMILKDIVKLYYAILDFKEIYFSLVSIQGKHK 309
Query: 420 SLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQE 478
I E ++PL + ++ +K + ++E ++DL ++E N Y+IS ++D L + NE+
Sbjct: 310 QTIIEMVVNPLHEVLNN--FSKLLDMIEMTIDLKEIEENKVYLISKNFDEELEQISNEKN 367
Query: 479 SLERQIHSLHKQTASDLDLPV-DKALK---------LDKGTQFGHVFRITKKEEPKIRKK 528
+L ++I ++ DL V D+ K +D T +FR++KK+ I+ +
Sbjct: 368 ALMKKIKRHKEEVEEDLFSDVCDRRYKRTNREDIRLVDCNTNV-FLFRVSKKDFSLIQHQ 426
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+ I + K+ + FT LK L +Y+ L Y Q E+V + I T++ + +
Sbjct: 427 --KKCISVRMNKNELLFTTKTLKGLCKEYEHCLNIYNTLQLEIVKKTICAVSTYTPVIEK 484
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPN 647
++S LDVL+SFA + + P PY RP + ++I++ SRHP +E Q + NFIPN
Sbjct: 485 FIDIVSTLDVLVSFAVVCYNSPFPYVRPTV-VEGGENVIMKKSRHPLLELQHNLSNFIPN 543
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
D + + +S I+TGPNMGGKST+IRQ + ++AQ+G FVPCD + V + RVG
Sbjct: 544 DIHMNKKESRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDVCEVPVFSQVMCRVG 603
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
A D QL+G+STF+ EM+E ++I+K A S II+DELGRGTSTY+G G++W+I +++++
Sbjct: 604 ASDFQLKGISTFLSEMIEASAIVKNADQNSFIIVDELGRGTSTYEGLGISWSIGKYILDH 663
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGAC 827
I+ LFATHFHE++ +A+ Q GV N HV ID +K+ LY+++ GA
Sbjct: 664 IKCFCLFATHFHEISNIAY---------QCEGVINRHVETTIDQKQKKICFLYEIKDGAS 714
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
++S+G++VAE A P+ V+ A EK ELE + + I+ S
Sbjct: 715 NKSYGVNVAEIAKLPKDVIEKAYEKVEELESAENKYYLKEKLNIDTSS 762
>gi|403372692|gb|EJY86250.1| Putative mismatch repair protein [Oxytricha trifallax]
Length = 740
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 264/738 (35%), Positives = 417/738 (56%), Gaps = 54/738 (7%)
Query: 147 NFR--ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE--------CLLP 196
NFR ++ +G ++++ +R L + EF+D+ HF+ +ES ++ L +P
Sbjct: 23 NFRITQSERLVGGSFINMNERSLLITEFMDNEHFSGLESLIIQLNNSSPDSKFKILVNMP 82
Query: 197 TEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI 256
T+ +K ++D L C V K +F + + L+ L++ S + S ++
Sbjct: 83 TDILKDK----VQDILGMCEVEYVMGNKKDFSSNGIENTLNNLLKESYNYKLE-ESEMDL 137
Query: 257 APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD--ANKNF 314
A AL A + Y L + + + ++KY+L Y+RLD AA++ALNV ++ + +
Sbjct: 138 ALAALSAAIEYMHLKTGKQK--QFSLKKYTLSQYLRLDVAALKALNVFPQSSEGVSGQGS 195
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKR 373
SL+ L+N+T T+ +G RLL WLKQP + +EIN RL IV + +R+D+ HLK
Sbjct: 196 SLYSLLNQTKTS-IGSRLLKKWLKQPTTNRDEINQRLAIVDYLYMNDHVRKDISAIHLKA 254
Query: 374 ISDIERLMHNLEK------RRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
D+E+L + A L VK+Y L + L + + ++ L
Sbjct: 255 FPDLEKLYAKFYRVQMKLRNNAQLVDCVKVYNMIFTLEGLCKYLDESIMDENHPLRTVIL 314
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
D L+ +D K ++E +D+ + + +Y+I+ + L + + ++++I L
Sbjct: 315 DQLKGTLED--FFKLKEMLEQCIDIGKAKQNDYIINPQFSPDLKQIDTDINKVKKKIEDL 372
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-EPKIR---KKLTTQFIVLETRKDGV 543
++ DL +K + L + +F KKE + +R KK + I ++ + +
Sbjct: 373 RRRVEDDLQ--CNKPVNLIESQMHTFIFECDKKEGDAGMRNSHKKFNYKIISIKNKI--M 428
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
F+ T+LK L +Y ++ + Y+ Q ELV +V++ A T+ + + +++++S+LDVL +FA
Sbjct: 429 SFSVTELKDLVREYNELEDNYRALQNELVMKVLEIASTYYPLLEQVSSLISQLDVLSAFA 488
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
++S+ Y +P I P I L S+HP + D + I NDC++ + +S QIITG
Sbjct: 489 SVSST--HQYCKPIICPEGKEQIYLIESKHPLIHYIDPASCINNDCRMQKNQSNLQIITG 546
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNMGGKST+IRQV + +L+A +G FVPC +A I + DCI ARVGA D QLRG+STFM EM
Sbjct: 547 PNMGGKSTYIRQVAICVLLAHIGCFVPCAKAEIPIVDCIIARVGASDHQLRGISTFMAEM 606
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
LE + +LK AT+RSLII+DELGRGTST +GFGLAWAI E++ EI LFATHFHE+TA
Sbjct: 607 LEASCMLKTATNRSLIIMDELGRGTSTNEGFGLAWAIAEYIATEINCFCLFATHFHEMTA 666
Query: 784 LAHENANEFNTKQMVGVANYHVS--AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
+ K++ V N +VS AH D +LTMLYKV+ G D+S+GIHVAE F
Sbjct: 667 ME---------KELPNVKNRYVSALAHGD----QLTMLYKVKDGVIDRSYGIHVAEMLKF 713
Query: 842 PESVVTLAREKAAELEDF 859
PE V+ A+ A+ELE+F
Sbjct: 714 PEEVLREAKALASELENF 731
>gi|146164189|ref|XP_001013224.2| MutS domain III family protein [Tetrahymena thermophila]
gi|117556983|gb|ABK35677.1| putative mismatch repair protein [Tetrahymena thermophila]
gi|146145776|gb|EAR92979.2| MutS domain III family protein [Tetrahymena thermophila SB210]
Length = 813
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 259/788 (32%), Positives = 431/788 (54%), Gaps = 60/788 (7%)
Query: 140 VIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE-----CL 194
+++A++ + N + +D +R + EF D +++N ES ++ + L
Sbjct: 14 MVLAVYFTYPNNTRQVNAAILDSDQRKFQVTEFQDTEYYSNFESLILQTNPQNQHTQFLL 73
Query: 195 LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGF 254
L ++E + + D + +C + + E+ K F + DL++L++ +P+ +
Sbjct: 74 LIQYPDLTTEKEKVNDIVQQCDINVKEKDKKSFLEKGYEDDLNKLLK---KPLAQYIQES 130
Query: 255 EI--APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANK 312
++ A +L ++ +L + +N + + L+++M+LD AA+ AL + + D +
Sbjct: 131 QLTHALSSLACIVGDLQLSKEPTNQNQFTVETLILNNFMKLDLAAINALLIFPKEKDIQR 190
Query: 313 ---------NFS-LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
NFS L L+++ C +G R L W+KQPL + EIN RLDIV+ FV++
Sbjct: 191 RNLMGGQENNFSTLVDLLDK-CKTQIGSRTLKRWIKQPLKNEAEINRRLDIVEYFVNNQD 249
Query: 363 LRQDLR-QHLKRISDIERLMHNL------EKRRAGLQQIVKLYQSSIRLPYIRSALQQY- 414
LR ++ + L++I+D+++L +K A L +K+YQ L S L QY
Sbjct: 250 LRNYIQNEFLRKIADLDKLYAKFYKVASKKKHNASLADCIKVYQLVTNL----STLAQYI 305
Query: 415 EGQFSS--LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE-NGEYMISSSYDTGLS 471
E S+ L + +L PL + ++ K ++++ S+D+++ + EY +SS + L+
Sbjct: 306 ENNHSADELAQREFLIPLGEILEN--FEKLSSMIDQSIDMEKARRDNEYQVSSKFSPTLA 363
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKL-T 530
L + + + +QI SL + A +L + KL + T ++F KKE + ++L +
Sbjct: 364 ELAKQMKQIMKQIESLRNEYAQELGVEP----KLVESTTHTYLFESKKKETDEAFRRLHS 419
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
++ + +K + FT +L+ +Y + + Y+ QK +V +++ T+ + +
Sbjct: 420 RKYKSISVKKGCISFTTDELQACVAEYNSLKDNYQEEQKSVVQKILDVVSTYYPAMERAS 479
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
++SELDVL +FA L +S PY +P+I+ + I L SRHPC+E D N + NDC
Sbjct: 480 FVISELDVLANFASLVNSATRPYVKPNIHASN-KQINLVESRHPCLEVMDN-NCVANDCF 537
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
+ KS F IITGPNMGGKSTFIRQV + +L+A +G F+PC + + D I RVGA D
Sbjct: 538 MDNDKSRFHIITGPNMGGKSTFIRQVAICVLLAHIGCFIPCKSGEMPIIDAIITRVGASD 597
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
QLRG+STFM EMLE +++L AT+ SLIIIDELGRGTST +GFG+AWAI EH+ +I+
Sbjct: 598 MQLRGISTFMSEMLEASNMLMTATENSLIIIDELGRGTSTSEGFGIAWAISEHIANKIKC 657
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVS-AHIDSTSRKLTMLYKVEPGACDQ 829
LFATHFHE+T + E + GV NY+VS ID+ KLTM YK++ G ++
Sbjct: 658 YCLFATHFHEMTKMEQE---------VKGVINYYVSCVTIDN---KLTMQYKLKRGFAER 705
Query: 830 SFGIHVAEFANFPESVVTLAREKAAELEDFTP--SAVISDDAKIEVGSKRKRISDPNDMS 887
S+G+ VAE +FP ++ A K ELE ++ S S D E +K + D +S
Sbjct: 706 SYGLFVAETLDFPREILEHASNKLLELESYSKGISENQSSDQNFENFNKNSQTDDIFLLS 765
Query: 888 RGAARAHQ 895
+ + A +
Sbjct: 766 KNSTIAQK 773
>gi|221051944|ref|XP_002257548.1| DNA mismatch-repair protein [Plasmodium knowlesi strain H]
gi|193807378|emb|CAQ37883.1| DNA mismatch-repair protein, putative [Plasmodium knowlesi strain
H]
Length = 855
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 248/769 (32%), Positives = 422/769 (54%), Gaps = 66/769 (8%)
Query: 138 TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCK-ECLLP 196
+P +++ R N G+ ++ L E++++ HFT +ES L+ C+ C L
Sbjct: 41 SPTVMSFNMETRNNIKYAGICIYNMNTNEFSLCEYIENEHFTILESLLIQ--CRPTCFLY 98
Query: 197 TEAVKSSECKTLRDALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFE 255
+ K ++ L+ C V E + +F T + DL +L++ + E V++ +S F+
Sbjct: 99 LSNNDKLDDKRIKLILSLCEVKYRELGRADFYNTCSMENDLSKLLKPT-EDVKNCISFFK 157
Query: 256 I--APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE------SK 307
+ A + +++ + LL+D S + Y+++ Y++LD AA ALNV E K
Sbjct: 158 LKLACRSFTSIVKHMNLLNDYSATNKCLLTNYNINRYLKLDRAATIALNVHEEHMLGEKK 217
Query: 308 TDANK--NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
T + N +L+ +N+ C +G+R L W+ P+ D +IN RLD+V +D +R
Sbjct: 218 TSCKRGTNNTLYTFLNK-CKTKIGERKLLQWVMHPIRDEAKINERLDMVSILKEDGVMRS 276
Query: 366 DLRQ-HLKRISDIERLMHNLE--------------KRR------------AGLQQIVKLY 398
++ +L++ISD++ ++ L+ RR ++ +VK+Y
Sbjct: 277 MIQSDYLRKISDLDVIIKKLKIVNSTTGEGKEENVARRIGGGKVKGGKNMCTIEDLVKMY 336
Query: 399 QSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENG 458
S + I L Y G++ + +++ +L PL+ + L+ F+ L+E +VD D+L N
Sbjct: 337 DSVVVSKRIYYCLNDYAGKYRNTLEKNFLTPLKEVLIS--LDSFVKLIELTVDFDELSNN 394
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL--------PVDKALKLDKGTQ 510
++IS +D L L +E++ R I ++ D++ + +KL
Sbjct: 395 NFLISRKFDEQLEKLASEKDETLRMIKEHRQEVEDDINNLKGISKKNNAKEDIKLVDCNI 454
Query: 511 FGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKE 570
+FR KK+ I+++ T F V K + FT KLK+L +Y+ +L++Y Q++
Sbjct: 455 NTFLFRAVKKDISSIQQRKKTYFQV-RMNKSEILFTTNKLKELCKRYEYILQDYNMAQEQ 513
Query: 571 LVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEG 630
L ++ IQ A ++ + L+ +++++DVL +FA +++S + Y RP I + + L
Sbjct: 514 LASKAIQVASSYWDPTTKLSKLIAQIDVLSAFAFVSASSISVYVRP-IAETNGQVLQLIE 572
Query: 631 SRHPCVEAQDWV--NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE+ + NFIPND + + IITGPNMGGKST+IRQ+ + LMAQ+G F
Sbjct: 573 SRHPLVESNFLLMNNFIPNDVHMNKTDKRLNIITGPNMGGKSTYIRQIALICLMAQIGCF 632
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPC A I + I RVG+ D QL+G+STF EM+E ++I+K A + +L+IIDELGRGT
Sbjct: 633 VPCTYARIPIFSQIMCRVGSSDIQLKGISTFFSEMIEISAIIKNADENTLVIIDELGRGT 692
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
STY+GFG++WA+ ++++++I+ LFATHFHE++ L E G N HV A
Sbjct: 693 STYEGFGISWAVAQYILKKIKCFCLFATHFHEMSNLEDEYQ---------GATNNHVGAK 743
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
ID +K++ LY+++ G D+S+G+HVA+ A P++V+ A EK+ ELE
Sbjct: 744 IDPEKKKISFLYEIKKGYADKSYGVHVAQIAKLPQNVIDKAFEKSKELE 792
>gi|350582428|ref|XP_003481267.1| PREDICTED: DNA mismatch repair protein Msh2-like [Sus scrofa]
Length = 450
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 285/445 (64%), Gaps = 17/445 (3%)
Query: 480 LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR 539
LE+++ S A DL L K +KLD QFG+ FR+T KEE +R F ++ +
Sbjct: 4 LEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFSTVDIQ 61
Query: 540 KDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVL 599
K+GVKFTN+KL L ++Y K EY+ Q +V ++ + + E ++L +L++LD +
Sbjct: 62 KNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLAQLDAV 121
Query: 600 LSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQ 659
+SFA +++ P PY RP I G I L+ SRH CVE QD V FIPND + K F
Sbjct: 122 VSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKDKQMFH 181
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +S+ DCI ARVGAGD QL+GVSTF
Sbjct: 182 IITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTF 241
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAWAI E++ +I A +FATHFH
Sbjct: 242 MAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFH 301
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
ELTALA+ Q+ V N HV+A +T LTMLY+V+ G CDQSFGIHVAE A
Sbjct: 302 ELTALAN---------QIPTVNNLHVTA--LTTEETLTMLYQVKKGVCDQSFGIHVAELA 350
Query: 840 NFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKE 899
NFP V+ A++KA ELE+F + ++E +KR + + +G +F+ +
Sbjct: 351 NFPRHVIECAKQKALELEEFQNIGAPQEHDEMEPAAKRCYL----EREQGEKIIQEFVSK 406
Query: 900 FSDMPLETMDLKEALERVKRMKDDL 924
+P M + ++K++K ++
Sbjct: 407 VKQVPFTEMSEENITMKLKQLKAEV 431
>gi|170589733|ref|XP_001899628.1| MutS domain III family protein [Brugia malayi]
gi|158593841|gb|EDP32436.1| MutS domain III family protein [Brugia malayi]
Length = 877
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 284/860 (33%), Positives = 444/860 (51%), Gaps = 59/860 (6%)
Query: 26 KTLPNDTRA-VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNM 84
K L N R V F+R ++Y+ + ++A FIA + + LR+ G + ++S ++ M
Sbjct: 10 KILQNKARGTVAIFERSEFYSCYDDDALFIANDVFCSEVGLRRCKIG-EHIASQGETELM 68
Query: 85 FETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVAL 144
+ + L R H L + ++R+ G+ G L +ED++ + E+ + + AL
Sbjct: 69 YHVLNNTQYL-RVVHDAILVK----HYRV--EGSLGCLNDFEDIVGNSAELCELTTVAAL 121
Query: 145 FPNFRENGCTIGLGYV------DLTKRVLGLAEFLDDSHFTNVESALVALGCKECLL-PT 197
R + + YV ++ + L +AEFLD HF N+E L AL +ECLL P
Sbjct: 122 TVTERHDSTEVPSFYVVSVVSCNVREMQLTIAEFLDTDHFVNLEKCLAALVPRECLLVPI 181
Query: 198 E------AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLV 251
+ + S L L + G+ +++ +F R L L + ++P V
Sbjct: 182 KMGISCVTLSSENSGQLHAVLKKAGI---KKELFQFSER-LPTALSDQIAEMIDPKYKDV 237
Query: 252 SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL----ESK 307
L+ + L + G + +R Y YM L+SA ++AL + E +
Sbjct: 238 HLSRAQKACFMGLIQHLNLNNIGMKSGKFQLRNYKSAGYMYLNSATIKALELFAAFQEDE 297
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
N SL+ L+N+ C G+RLL W+++PL D+ +IN RLD+V+AFV++ + R L
Sbjct: 298 DLMNDVGSLYDLLNK-CRTPQGQRLLRDWIRRPLHDIRKINERLDVVEAFVNNFSCRTIL 356
Query: 368 RQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE---GQFSSLIK 423
L+RI DI + L +++AGLQ+ +LYQ L L + G + +
Sbjct: 357 HDDILRRIPDITIITRKLVQKKAGLQECYRLYQVVRLLKRFHQVLDELHASCGPLAPSVN 416
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQL-ENGEYMISSSYDTGLSALKNEQESLER 482
+ L+PL KF+AL+E +VDL L E G Y I S D L A +E+
Sbjct: 417 DLCLEPLA--LAQLQFEKFMALIENTVDLAYLKEKGSYRILPSIDENLLANAERIHKIEK 474
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK-D 541
+ ++ KQ S + + +KLDK G FR+T K E IR+ +LET K
Sbjct: 475 KCKAVLKQLCSG----ITETVKLDKTEHHGFHFRVTLKAERSIRQ---LGMKILETSKGS 527
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
GV+FT L L +Y K+ Y+ Q VN V+ + ++ F L+ ++ +D L++
Sbjct: 528 GVRFTCKDLDTLNREYLKLASCYEAIQSSFVNMVVDISSGYASTFCELSGAVATIDTLVA 587
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIR---GKSW 657
+ LAS P+ Y RP I D + L+ RHP +EA + FI ND L G +
Sbjct: 588 LSILASRSPSGYVRPQILDEDKQVLELKKCRHPVMEANPNSPQFISNDVILGSEQGGDAM 647
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
F ++TG NMGGKST++R +++L+AQ+GSFVPC+ A S+ D I R+G+ D Q +GVS
Sbjct: 648 FLMLTGANMGGKSTYLRCCAISVLLAQMGSFVPCESARFSLIDGIHTRIGSCDYQCKGVS 707
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EM + ASIL+ AT SL+I+DELGRGTSTYDGFGLAWAI E +V ++ ++ATH
Sbjct: 708 TFMAEMNDCASILESATCHSLVIVDELGRGTSTYDGFGLAWAIAEDIVSRVKCFCIYATH 767
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
+H+L L+ KQ+ V ++ +D +L +LYK+ PG +SFG+++ +
Sbjct: 768 YHDLAGLS-----RVYPKQLKSVCT---ASQVDENG-QLILLYKIIPGVAGRSFGLNIGK 818
Query: 838 FANFPESVVTLAREKAAELE 857
PE+V+ A + LE
Sbjct: 819 MVGLPENVLQTASDMLESLE 838
>gi|84784028|gb|ABC61979.1| Msh2-like protein [Trichomonas vaginalis]
Length = 851
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 287/867 (33%), Positives = 444/867 (51%), Gaps = 80/867 (9%)
Query: 26 KTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMF 85
K P + VRFF + Y A +A IA + H+ AL+ + VS+S N++
Sbjct: 10 KLPPKPEKTVRFFRKGGSYFAIDSDAEMIATKHIHSFGALKD--SNDKKYKYVSISDNLY 67
Query: 86 ETIARDLLLERTDHT-LELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVAL 144
++ RDLLL +HT +E++E +++ +PGN+ D++ A+ ++ ++++
Sbjct: 68 SSLLRDLLL--YNHTSIEVWEFESNHYTKTTEASPGNVMPVIDIINADFDISQQTSLLSI 125
Query: 145 FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSE 204
G +I D T + EF + F + E+ + E L+ V
Sbjct: 126 CVKEVPEGISIDACVCDPTLYTIATTEFFETPSFCHFETLMTQTMPSEVLI--AGVPDFC 183
Query: 205 CKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGAL 264
K + D + + G+ KTE ++ V ++ L + + +V+ I P
Sbjct: 184 KKKVFDIIDKFGI----NYKTE-TSKSKVHEIGTL--PNTNSCKAMVAT--IKP------ 228
Query: 265 LSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN---FSLFGLMN 321
N Y I+K++L +M +D +A ALN+ +AN+ S+F L+N
Sbjct: 229 -----------NLPEYTIKKFTLSEFMTVDYSAAAALNIFPDG-EANRTGLPTSIFALLN 276
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
C+ MG RLL + QPLL+ EIN RLDIV+AF+ + +R Q +K++ D+ER+M
Sbjct: 277 -ICSTPMGSRLLQQMMLQPLLNPAEINKRLDIVEAFIRENEIRNQTHQIMKQLPDVERIM 335
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD-DDHLN 440
++ +A L VKLY + S +++++ SS + E + D L+ +T+ +++N
Sbjct: 336 RKFKRGKATLPDCVKLYD-------VASVVEKFDFFTSSNVAE-FKDFLDEITECSENIN 387
Query: 441 KFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD 500
K L+E ++D + Y I S+D GLS + + ++ + ++ A + + D
Sbjct: 388 KAKTLIEATIDFSLIPEHIYRIKPSFDPGLSESAEKIDEIKAAMEKKRQKIAKNCCIEDD 447
Query: 501 KALKLDKGT-QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
K LK+++ Q RI + E KIR T +LETRKDGV F +KK+ D+
Sbjct: 448 K-LKIERAANQKSFYLRIPRNMESKIRSDSTVT--ILETRKDGVHFITPSIKKMADEIIT 504
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ EY Q+E+ +++T FS +F+ L+ + +++D+ + A A++ Y RP ++
Sbjct: 505 LESEYSVKQREIQKTLLETLTEFSPVFEKLSEVFAKIDLFCALAQSAAA--NQYVRPKLS 562
Query: 620 PPDVG--DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
DVG +I L +RHP +E VNFI ND K+ +G S F II+GPN GKSTF++ VG
Sbjct: 563 --DVGSPEINLVQARHPILEKH--VNFIANDIKMQKGTSSFIIISGPNSAGKSTFLKTVG 618
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ MA +GSFVPC A+I + I ARVGA D +STF EM E ASIL+ A+ S
Sbjct: 619 CCVYMAHIGSFVPCSEATIPIIPSIHARVGASDS--LNMSTFTFEMTEMASILESASANS 676
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQM 797
L+IIDELGR TS DGFGLAWAI + L I A TLFATHFHEL L E +
Sbjct: 677 LVIIDELGRSTSCSDGFGLAWAISKKLANGIGAFTLFATHFHELCNLEQE---------I 727
Query: 798 VGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V N+H+ A + R M+Y G SFGI AE A FP V+ AREK +LE
Sbjct: 728 SCVKNFHMKADSEDCLR---MMYTFAEGPFGDSFGIDAAERAGFPSEVMKAAREKVEQLE 784
Query: 858 DFTPSAVISDDAKIEVGSKRKRISDPN 884
I D + R ++ DPN
Sbjct: 785 -------IIDKSNDGKPVARAKVFDPN 804
>gi|302766323|ref|XP_002966582.1| hypothetical protein SELMODRAFT_407609 [Selaginella moellendorffii]
gi|300166002|gb|EFJ32609.1| hypothetical protein SELMODRAFT_407609 [Selaginella moellendorffii]
Length = 868
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/365 (55%), Positives = 269/365 (73%), Gaps = 24/365 (6%)
Query: 166 VLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKT 225
V G EFLDD +TN+ESAL+ALGC+EC+LP E KS + + LRD L RC V LTE+KK
Sbjct: 287 VAGTLEFLDDDQYTNLESALLALGCRECVLPAEHAKSVDGRRLRDVLARCNVRLTEKKKA 346
Query: 226 EFKTRDLVQDLDRLVRG-SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRK 284
EFK+RD+ QDL RL++ SV +R+LV +E+A AL ALL+Y ++ +D+SN+G Y +++
Sbjct: 347 EFKSRDIEQDLSRLIKSTSVGELRELVVKYEVASAALAALLAYTDIFADDSNHGKYRLQQ 406
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
YSLD YMRLD+AA+RAL+VLESK D NKN +LFGLMNRT TAGMGKRLL+ WLKQPLLDV
Sbjct: 407 YSLDRYMRLDAAALRALHVLESKNDPNKNSTLFGLMNRTSTAGMGKRLLNRWLKQPLLDV 466
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+E R D+V FV+D LR+ L+ LKR+ D+ERL LE+ RA LQ +VKLYQ S+RL
Sbjct: 467 DETKHRHDVVHMFVEDAELRESLKNCLKRVPDVERLTRKLERSRATLQDLVKLYQVSVRL 526
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
++ AL++YEG+F+S I+ER ++DLDQ++NGEY+IS+
Sbjct: 527 SVVKDALERYEGEFASAIEER-----------------------AIDLDQIKNGEYIISA 563
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
SYD+ L +K +++++E +I H+Q +DLDLP DK+LKLDK TQ+GHVFR TK+EEPK
Sbjct: 564 SYDSSLKTIKADRDAVEEEIREAHEQATNDLDLPADKSLKLDKTTQWGHVFRSTKEEEPK 623
Query: 525 IRKKL 529
+RKKL
Sbjct: 624 VRKKL 628
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 121/249 (48%), Gaps = 71/249 (28%)
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
+GVNI+MAQVG F+PCDR A + C V + E+ T
Sbjct: 630 IGVNIMMAQVGCFLPCDR----------AEISIRSCIFARVGRRLPELFAT--------- 670
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHE---NANEF 792
LFATHFHELT+++H +A+
Sbjct: 671 -------------------------------------LFATHFHELTSISHRQGPSAHGP 693
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+ VG++N+HVSAHID SRKLTMLYKVE G CDQSFGIHVAEF +F ++
Sbjct: 694 SKGPPVGISNFHVSAHIDPNSRKLTMLYKVEDGPCDQSFGIHVAEFLDFQNAL------- 746
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKE 912
+AELEDF+P A++ D G + + S + +FLK F+ PL+ M K
Sbjct: 747 SAELEDFSPQAILEDK-----GDAGSKRKRSSSSSSSRDKGWKFLKGFAAWPLDQMRHKH 801
Query: 913 ALERVKRMK 921
AL++ +++K
Sbjct: 802 ALKKGQKVK 810
>gi|340503635|gb|EGR30181.1| hypothetical protein IMG5_138850 [Ichthyophthirius multifiliis]
Length = 705
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 247/723 (34%), Positives = 412/723 (56%), Gaps = 58/723 (8%)
Query: 134 EMQDTPVIVALFPNF-RENGC-TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALG-- 189
E QD I+ L NF +NG + ++ +R + EF D HF+N ES LV
Sbjct: 8 EYQDEKNIIILCTNFDYQNGIRQVSAAIINYDQRKFQITEFQDSEHFSNFESLLVQTNPQ 67
Query: 190 ---CKECLLPTEAVKSSECKTLRDALTRCGVM-LTERKKTEFKTRDLVQDLDRLVRGSVE 245
K L +E + ++D + +C + + ER+K F ++ +D+++L++ S++
Sbjct: 68 DQQTKFVLYINYPDLQTEKEKIQDIIGQCDIQSIQEREKKYFLEKNYTEDINKLLKKSLQ 127
Query: 246 P-VRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL 304
+++ S A L + +L D+SN+ + + K+ L+ +M+LD AA+ AL +
Sbjct: 128 QHIQE--STLTSALQCLNCAVLDQQLSKDQSNFKQFTLEKFVLNKFMKLDLAAINALLIF 185
Query: 305 ESKTD---------ANKNF-SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIV 354
+ D A ++F +L L+++ C +G RLL W++QPL D EIN RLDIV
Sbjct: 186 PKQQDQYRKSLMGGAEQSFQTLVDLLDK-CKTQIGSRLLRRWIRQPLQDEEEINKRLDIV 244
Query: 355 QAFVDDTALRQDLR-QHLKRISDIERLMHNL------EKRRAGLQQIVKLYQ--SSIRLP 405
+ + LR L+ L++I+D+++L +K L +K+Y ++ L
Sbjct: 245 EYLIQKNDLRNYLQTDFLRKIADLDKLYVKFYKVASNKKHNCNLSDCIKVYSLVENMNLL 304
Query: 406 YIRSALQQYEGQFSSLIKE-RYLDPLESLTDDDHLNKFIALVETSVDLDQLEN-GEYMIS 463
Y Q E Q ++ I E + L+PL L + NK ++++ S+DL++ ++ EYM++
Sbjct: 305 Y-----QYLENQENTQISENQLLNPLFEL--QNQFNKLQSMIKQSIDLEKAKSQNEYMVN 357
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-E 522
+ L+ + + ++++ +I+SL ++ A +L + + K+ ++F KKE +
Sbjct: 358 PMFSPALTEISKKMKTIQSEINSLKQEYARELGVEI----KIVDSNTHTYLFEGKKKETD 413
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTF 582
R+K ++ ++ +K + +T L+ L +Y + +EY QK++V++++ ++
Sbjct: 414 DAFRRKNHQKYKIISMKKTTILYTTEDLQSLVAEYNCISDEYTQEQKQVVDKILAVVSSY 473
Query: 583 SEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV 642
++ ++ +S+LDVL +FA L + PT YT+PDI + I L RHPC+E D
Sbjct: 474 YPAMENASSYISQLDVLSTFAQLVVNSPTKYTKPDIQVQN-NRINLVQCRHPCLEVVDN- 531
Query: 643 NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCI 702
N +PNDC + + KS F IITGPNMGGKST+IRQV + +L+A VG ++P ++A + V D I
Sbjct: 532 NCVPNDCYMDKEKSRFHIITGPNMGGKSTYIRQVALCVLLAHVGCYIPAEKAEMPVIDAI 591
Query: 703 FARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICE 762
RVGA D Q+RG+STFM EMLE + +LK A+++SLIIIDELGRGT+T +GFGLAWAI E
Sbjct: 592 ITRVGASDMQIRGISTFMSEMLEASCMLKTASEKSLIIIDELGRGTATNEGFGLAWAISE 651
Query: 763 HLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKV 822
++VE+I+ LFATHFHE+T + K+M GV NY+V + + KLTM Y+V
Sbjct: 652 YIVEKIQGFCLFATHFHEMTKMG---------KEMKGVVNYYVDCV--AVNNKLTMQYRV 700
Query: 823 EPG 825
+ G
Sbjct: 701 KEG 703
>gi|123469203|ref|XP_001317815.1| MutS domain III family protein [Trichomonas vaginalis G3]
gi|121900558|gb|EAY05592.1| MutS domain III family protein [Trichomonas vaginalis G3]
Length = 851
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 285/867 (32%), Positives = 443/867 (51%), Gaps = 80/867 (9%)
Query: 26 KTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMF 85
K P + VRFF + Y A +A IA + H+ AL+ + VS+S N++
Sbjct: 10 KLPPKPEKTVRFFRKGGSYFAIDSDAEMIATKHIHSFGALKD--SNDKKYKYVSISDNLY 67
Query: 86 ETIARDLLLERTDHT-LELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVAL 144
++ RDLLL +HT +E++E +++ +PGN+ D++ A+ ++ ++++
Sbjct: 68 SSLLRDLLL--YNHTSIEVWEFESNHYTKTTEASPGNVMPVIDIINADFDISQQTSLLSI 125
Query: 145 FPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSE 204
G +I D T + EF + F + E+ + E L+ V
Sbjct: 126 CVKEVPEGISIDACVCDPTLYTIATTEFFETPSFCHFETLMTQTMPSEVLI--AGVPDFC 183
Query: 205 CKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGAL 264
K + D + + G+ KTE ++ V ++ L + + +V+ I P
Sbjct: 184 KKKVFDIIDKFGI----NYKTE-TSKSKVHEIGTL--PNTNSCKAIVAT--IKP------ 228
Query: 265 LSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN---FSLFGLMN 321
N Y I+K++L +M +D +A ALN+ +AN+ S+F L+N
Sbjct: 229 -----------NLPEYTIKKFTLSEFMTVDYSAAAALNIFPDG-EANRTGLPTSIFALLN 276
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
C+ MG RLL + QPLL+ EIN RLDIV+AF+ + +R Q +K++ D+ER+M
Sbjct: 277 -ICSTPMGSRLLQQMMLQPLLNPAEINKRLDIVEAFIRENEIRNQTHQIMKQLPDVERIM 335
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD-DDHLN 440
++ +A L VKLY + S +++++ F+S + D L+ +T+ +++N
Sbjct: 336 RKFKRGKATLPDCVKLYD-------VASVVEKFDF-FTSPNVAEFKDFLDEITECSENIN 387
Query: 441 KFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD 500
K L+E ++D + Y I S+D GLS + + ++ + ++ A + + D
Sbjct: 388 KAKTLIEATIDFSLIPEHIYRIKPSFDPGLSESAEKVDEIKAAMEKKRQKIAKNCCIEDD 447
Query: 501 KALKLDKGT-QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
K LK+++ Q RI + E KIR T +LETRKDGV F +KK+ D+
Sbjct: 448 K-LKIERAANQKSFYLRIPRNMESKIRSDSTVT--ILETRKDGVHFITPSIKKMADEIIT 504
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ EY Q+E+ +++T FS +F++L+ + +++D+ + A A++ Y RP ++
Sbjct: 505 LESEYSVKQREIQKTLLETLTEFSPVFENLSEVFAKIDLFCALAQSAAA--NQYVRPKLS 562
Query: 620 PPDVG--DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
DVG +I L +RHP +E VNFI ND K+ +G S F II+GPN GKST ++ VG
Sbjct: 563 --DVGSPEINLVQARHPILEKH--VNFIANDIKMQKGTSSFIIISGPNSAGKSTLLKTVG 618
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ MA +GSFVPC A+I + I ARVGA D +STF EM E ASIL+ A+ S
Sbjct: 619 CCVYMAHIGSFVPCSEATIPIIPSIHARVGASDS--LNMSTFTFEMTEMASILESASANS 676
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQM 797
L+IIDELGR TS DGFGLAWAI + L I A TLFATHFHEL L E +
Sbjct: 677 LVIIDELGRSTSCSDGFGLAWAISKKLANGIGAFTLFATHFHELCNLEQE---------I 727
Query: 798 VGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V N+H+ A + R M+Y G SFGI AE A FP V+ AREK +LE
Sbjct: 728 SCVKNFHMKADSEDCLR---MMYTFAEGPFGDSFGIDAAERAGFPSEVMKAAREKVEQLE 784
Query: 858 DFTPSAVISDDAKIEVGSKRKRISDPN 884
I D + R ++ DPN
Sbjct: 785 -------IIDKSNDGKPVARAKVFDPN 804
>gi|62822548|gb|AAY15096.1| unknown [Homo sapiens]
Length = 586
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/584 (37%), Positives = 349/584 (59%), Gaps = 22/584 (3%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 GSV-EPVRDLV---SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAA 297
G E + V ++A +L A++ + ELLSD+SN+G + + + YM+LD AA
Sbjct: 247 GKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKLDIAA 306
Query: 298 MRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL++V+A
Sbjct: 307 VRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEA 365
Query: 357 FVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
FV+D LRQ L++ L+R D+ RL +++ A LQ +LYQ +LP + AL+++E
Sbjct: 366 FVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHE 425
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN 475
G+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS L+
Sbjct: 426 GKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE 483
Query: 476 EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIV 535
LE+++ S A DL L K +KLD QFG+ FR+T KEE +R F
Sbjct: 484 IMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRN--NKNFST 541
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++ +
Sbjct: 542 VDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNIS 585
>gi|389582008|dbj|GAB64408.1| DNA mismatch repair enzyme [Plasmodium cynomolgi strain B]
Length = 843
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/778 (31%), Positives = 418/778 (53%), Gaps = 87/778 (11%)
Query: 138 TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCK-ECLLP 196
+P +++ + N G+ ++ L E++++ HFT +ES L+ C+ C L
Sbjct: 32 SPTVMSFNMETKNNIKYAGICIYNMNTNEFSLCEYIENEHFTILESMLIQ--CRPTCFLY 89
Query: 197 TEAVKSSECKTLRDALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGF- 254
+ + K ++ L+ C + E K +F T + DL +L++ + E V++ +S F
Sbjct: 90 LSSNDKLDDKRIKLILSLCEIKYRELGKNDFYNTYSMENDLSKLLKPT-EDVKNCISFFK 148
Query: 255 -EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL------ESK 307
++A + +++ Y +LL+D S + Y+++ Y++LD AA ALNV E K
Sbjct: 149 LQLACRSFNSIVKYMKLLNDYSATNKCVLTNYNINRYLKLDMAATIALNVHAEHMLGEKK 208
Query: 308 TDANK--NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
T ++ N +LF +N+ C +G+R L W+ P+ D +IN RLD+V +D +R
Sbjct: 209 TKCSRGSNLTLFTFLNK-CKTKIGERKLLQWVMHPIRDEAKINERLDMVSILKEDGVMRS 267
Query: 366 DLRQ-HLKRISDIERLMHNLE-------------------------------KRRAGLQQ 393
++ +L++ISD++ ++ L+ K L+
Sbjct: 268 MIQSDYLRKISDLDVIIKKLKIVNSATVEGEEVDGARKMGGGQMGGSKIGGGKNACSLED 327
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
+VK+Y S + I L YEG++ + +++++L PL+ + L+ F+ L+E +VD D
Sbjct: 328 LVKMYDSVVVSKRIYYCLNDYEGKYRNTLEKKFLMPLKEVLIS--LDSFVKLIELTVDFD 385
Query: 454 QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL-----------PVDKA 502
+L N ++IS +D L L +E++ + + I ++ D++ +
Sbjct: 386 ELCNNNFLISRKFDEQLEKLASEKDQILQMIKHHRQEVEDDINYLKGVTKKNNAKNAKED 445
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
+KL +FR KK+ I+++ T F + K + FT KLK L +Y +L+
Sbjct: 446 IKLVDCNVNTFLFRAVKKDMSSIQQRKKTYF-QMRMNKSEILFTTNKLKDLCKRYDYILQ 504
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
+Y Q++L ++ IQ A ++ E LA +++++DVL +FA +++S + Y RP +
Sbjct: 505 DYNLSQEQLASKAIQVASSYWEPTTKLAKLIAQIDVLCAFAFISASSLSVYVRPIVETN- 563
Query: 623 VGDII-LEGSRHPCVEAQDWV--NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
G ++ L SRHP VE+ + NFIPND + + IITGPNMGGKST+IRQ+ +
Sbjct: 564 -GQVLHLIESRHPLVESNFLLMNNFIPNDVHMNKTDKRLNIITGPNMGGKSTYIRQIALI 622
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
LMAQ+G FVPC A + + I RVG+ D QL+G+STF EM+E ++I+K A + +L+
Sbjct: 623 CLMAQIGCFVPCTYAKMPIFSQIMCRVGSSDIQLKGISTFFSEMIEISAIIKNADENTLV 682
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
IIDELGRGTSTY+GFG++WA+ ++++ +I+ LFATHFHE++ L E G
Sbjct: 683 IIDELGRGTSTYEGFGISWAVAQYILNKIKCFCLFATHFHEMSNLEEEYQ---------G 733
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N H+S LY++ G D+S+G+HVA+ A P++V+ A EK+ ELE
Sbjct: 734 ATNNHIS-----------FLYEIRKGYADKSYGVHVAQIAKLPQNVIDKAFEKSKELE 780
>gi|124088618|ref|XP_001347169.1| DNA mismatch repair protein Msh2 [Paramecium tetraurelia strain
d4-2]
gi|145474183|ref|XP_001423114.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057558|emb|CAH03542.1| DNA mismatch repair protein Msh2, putative [Paramecium tetraurelia]
gi|124390174|emb|CAK55716.1| unnamed protein product [Paramecium tetraurelia]
Length = 794
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/742 (33%), Positives = 406/742 (54%), Gaps = 50/742 (6%)
Query: 138 TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALG-----CKE 192
T V+ ++ N N + ++D +R++ + EF D+ HF+ E ++ + K
Sbjct: 9 TLVVQIIYTN---NERHLNCAFLDQDRRMIEVCEFQDNEHFSVFECLVLQVNPNGQDAKL 65
Query: 193 CLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS 252
+L SE + +RD L +C + E+ K +F +L +L+++++ + R
Sbjct: 66 TVLIQMPELESENRKVRDILEQCEFEVIEKNKKDFSEINL-SNLNKVLKKNFNTCR---V 121
Query: 253 GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT---- 308
+I + LL + L D++N + I +L +MRLD AA+ AL + +
Sbjct: 122 EEQICTQCIQCLLEHTRLYKDDTNTQKFNIGLLNLHKFMRLDLAAINALMIFPKQGIKQF 181
Query: 309 DANKNFS-LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
D+ N S L ++R C MGKR L W+K PL + EIN RL+IV+ +++ RQ L
Sbjct: 182 DSGNNASTLVDYLDR-CITQMGKRCLRRWIKMPLQSIQEINQRLNIVEYLYQNSSFRQFL 240
Query: 368 RQ-HLKRISDIERLMHNL------EKRRAGLQQIVKLYQSSIRLPYIRSALQQ--YEGQF 418
+ LKRI D+++L ++ A L VK+YQ ++ I + Q Y+ Q
Sbjct: 241 NEDFLKRIPDLDKLYAKFYKVASDKRNNANLSDCVKVYQLIQKIKDIIKRVNQEMYQSQ- 299
Query: 419 SSLIKERYLDPLE-SLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQ 477
+S+++E +L P E +L+D + L + ++E S+DL + GE++++ + L L
Sbjct: 300 NSILQEIFLKPFEENLSDFEKLEE---MIEKSIDLSKAYTGEFIVNPRFSEKLMQLSKNI 356
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
I ++ T ++L + V ++ GT + ++F K+ + +K ++ +
Sbjct: 357 TQCMNDIENVRLDTETELGITVTL---IESGT-YTYIFEAKKQSADEAFRKNPKKYKTIS 412
Query: 538 TRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
+ + FT KL+ Y + Y+ Q+E V +++ ++ + + + ++SE+D
Sbjct: 413 VKNRALTFTVEKLQSTVADYVHFRDLYQEVQQEKVQEILKIVCSYYPVMEQASRLISEID 472
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSW 657
VL +FA +A + P + RP + +I+L+ SRHP +EA D I ND ++ R S
Sbjct: 473 VLSAFASVARNAPRAFVRPIFT--EKKEILLKESRHPLLEAIDST-CIVNDLEMDRKSSR 529
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
IITGPNMGGKST+IRQ+ + +L+A +G FVPC A + V D I RVGA D Q +G+S
Sbjct: 530 LHIITGPNMGGKSTYIRQIAICVLLAHIGCFVPCTTAVVPVIDAIITRVGASDVQTKGIS 589
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EMLE + +LK A SLIIIDELGRGTST +GFG+AWAI EH+ ++I++ LFATH
Sbjct: 590 TFMSEMLEASCMLKTAKPDSLIIIDELGRGTSTSEGFGIAWAIAEHIAKQIQSYCLFATH 649
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
FHE+T + HE + GV NY+VS + K+TM Y+V GA D+S+G+ VA+
Sbjct: 650 FHEMTLMEHE---------ITGVKNYYVSCVTEDD--KITMEYRVRYGAVDRSYGLLVAQ 698
Query: 838 FANFPESVVTLAREKAAELEDF 859
FP+ V+ A++KA ELE F
Sbjct: 699 MLKFPKEVIDDAKQKAIELETF 720
>gi|237831911|ref|XP_002365253.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
gi|211962917|gb|EEA98112.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
Length = 936
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/716 (35%), Positives = 384/716 (53%), Gaps = 80/716 (11%)
Query: 206 KTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS---GFEIAPGALG 262
K L D C KK T L QDL L+ + +++ +S + A A
Sbjct: 108 KKLADLAAACECEFVPVKKNSADTASLHQDLATLLVAE-DSIKNHISRELQLKTAAAACA 166
Query: 263 ALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV---------------LESK 307
ALLS A LLSD+ + Y L +Y+R+D+AA AL + L +K
Sbjct: 167 ALLSQARLLSDDMYIRQCTLETYPLGNYLRIDNAAAAALYLFPSSLQQSQQQALLPLSAK 226
Query: 308 TDANKNFS--------------LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
+ S ++ LM+R C+ +G R L + QPL+D +I R DI
Sbjct: 227 SSGASRASSLACALSAGGGISSVYALMSRWCSTQLGARRLFTCMSQPLVDKKKIEERYDI 286
Query: 354 VQAFVDDTALR-QDLRQHLKRISDIERLMHNLEK----------------RRAG------ 390
V+ F D A R Q H K + D++RL + ++ G
Sbjct: 287 VELFQTDEAFRRQVFCSHFKHVFDLDRLAGRFHRLASAAKDLDADAAPRGKKGGIFSRVK 346
Query: 391 --LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET 448
L+ +VKLY ++ + + L+ Y G +++ + +PL + FI LVE
Sbjct: 347 LTLEDLVKLYDCAVECTSLETTLRGYAGIHRESLEKAFTEPLSEAVKS--FSTFINLVEF 404
Query: 449 SVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV------DKA 502
++D+++ ++G ++IS +D+ L++L +++E L +++ +Q A D D+P +
Sbjct: 405 TIDMEEAKHGSFVISRRFDSELASLLDKKEELRSRMNR-ERQKAED-DIPFASRKRDTEI 462
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
+KL + G V R+TKK++ + ++ + K + FT ++L+ L +++ V E
Sbjct: 463 VKLIEDNTMGFVLRVTKKDQSAVLSS-RGRYHQVRLNKSELIFTTSELRGLCREFKDVAE 521
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
Y Q LV + + A ++ + LA +L LDVL +FA A++ P PY RP I D
Sbjct: 522 AYAAMQNSLVEKALLVAASYWPAVEKLAELLGMLDVLGAFAAAANAAPMPYVRPQIVEGD 581
Query: 623 VGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
G ++L+ SRHP +E Q + FI ND L R + IITGPNMGGKST+IRQV + +L
Sbjct: 582 AGGLVLKASRHPLLEIQPGTSSFIANDVHLDRERR-LAIITGPNMGGKSTYIRQVALTVL 640
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
+AQ+GSFVPC + + + RVGA D QLRGVSTF+ EM+E A+IL+ A +SL++I
Sbjct: 641 LAQIGSFVPCASCQLPIFTQVICRVGASDIQLRGVSTFLAEMVEAAAILRNANTQSLVVI 700
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTSTY+GFGLAWAI +HL E + +LFATHFHE+ L E + GV+
Sbjct: 701 DELGRGTSTYEGFGLAWAIAKHLAAEAKCLSLFATHFHEMGQLCEE---------VPGVS 751
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HVSA ++ +++L LY+++ G DQSFG+HVA FA P +VV AR+K+AELE
Sbjct: 752 NLHVSAAVNRETQQLAFLYRLQSGCVDQSFGVHVAGFAGLPATVVERARQKSAELE 807
>gi|221506587|gb|EEE32204.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG]
Length = 936
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/716 (35%), Positives = 384/716 (53%), Gaps = 80/716 (11%)
Query: 206 KTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS---GFEIAPGALG 262
K L D C KK T L QDL L+ + +++ +S + A A
Sbjct: 108 KKLADLAAACECEFVPVKKNSADTASLHQDLATLLVAE-DSIKNHISRELQLKTAAAACA 166
Query: 263 ALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV---------------LESK 307
ALLS A LLSD+ + Y L +Y+R+D+AA AL + L +K
Sbjct: 167 ALLSQARLLSDDMYIRQCTLETYPLGNYLRIDNAAAAALYLFPSSLQQSQQQALLPLSAK 226
Query: 308 TDANKNFS--------------LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
+ S ++ LM+R C+ +G R L + QPL+D +I R DI
Sbjct: 227 SSGASRASSLACALSAGGGISSVYALMSRWCSTQLGARRLFTCMSQPLVDKKKIEERYDI 286
Query: 354 VQAFVDDTALR-QDLRQHLKRISDIERLMHNLEK----------------RRAG------ 390
V+ F D A R Q H K + D++RL + ++ G
Sbjct: 287 VELFQTDEAFRRQVFCSHFKHVFDLDRLAGRFHRLASAAKDLDADAAPRGKKGGIFSRVK 346
Query: 391 --LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET 448
L+ +VKLY ++ + + L+ Y G +++ + +PL + FI LVE
Sbjct: 347 LTLEDLVKLYDCAVECTSLETTLRGYAGIHRESLEKAFTEPLSEAVKS--FSTFINLVEF 404
Query: 449 SVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD------KA 502
++D+++ ++G ++IS +D+ L++L +++E L +++ +Q A D D+P +
Sbjct: 405 TIDMEEAKHGSFVISRRFDSELASLLDKKEELRSRMNR-ERQKAED-DIPFASRKRDAEI 462
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
+KL + G V R+TKK++ + ++ + K + FT ++L+ L +++ V E
Sbjct: 463 VKLIEDNTMGFVLRVTKKDQSAVLSS-RGRYHQVRLNKSELIFTTSELRGLCREFKDVAE 521
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
Y Q LV + + A ++ + LA +L LDVL +FA A++ P PY RP I D
Sbjct: 522 AYAAMQNSLVEKALLVAASYWPAVEKLAELLGMLDVLGAFAAAANAAPVPYVRPQIVEGD 581
Query: 623 VGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
G ++L+ SRHP +E Q + FI ND L R + IITGPNMGGKST+IRQV + +L
Sbjct: 582 AGGLVLKASRHPLLEIQPGTSSFIANDVHLDRERR-LAIITGPNMGGKSTYIRQVALTVL 640
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
+AQ+GSFVPC + + + RVGA D QLRGVSTF+ EM+E A+IL+ A +SL++I
Sbjct: 641 LAQIGSFVPCASCQLPIFTQVICRVGASDIQLRGVSTFLAEMVEAAAILRNANKQSLVVI 700
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTSTY+GFGLAWAI +HL E + +LFATHFHE+ L E + GV+
Sbjct: 701 DELGRGTSTYEGFGLAWAIAKHLAAEAKCLSLFATHFHEMGQLCEE---------VPGVS 751
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HVSA ++ +++L LY+++ G DQSFG+HVA FA P +VV AR+K+AELE
Sbjct: 752 NLHVSAAVNRETQQLAFLYRLQSGCVDQSFGVHVAGFAGLPATVVERARQKSAELE 807
>gi|221486897|gb|EEE25143.1| DNA mismatch repair protein, putative [Toxoplasma gondii GT1]
Length = 936
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 254/716 (35%), Positives = 384/716 (53%), Gaps = 80/716 (11%)
Query: 206 KTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS---GFEIAPGALG 262
K L D C KK T L QDL L+ + +++ +S + A A
Sbjct: 108 KKLADLAAACECEFVPVKKNSADTASLHQDLATLLVAE-DSIKNHISRELQLKTAAAACA 166
Query: 263 ALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV---------------LESK 307
ALLS A LLSD+ + Y L +Y+R+D+AA AL + L +K
Sbjct: 167 ALLSQARLLSDDMYIRQCTLETYPLGNYLRIDNAAAAALYLFPSSLQQSQQQALLPLSAK 226
Query: 308 TDANKNFS--------------LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
+ S ++ LM+R C+ +G R L + QPL+D +I R DI
Sbjct: 227 SSGASRASSLACALSAGGGISSVYALMSRWCSTQLGARRLFTCMSQPLVDKKKIEERYDI 286
Query: 354 VQAFVDDTALR-QDLRQHLKRISDIERL---MHNL---------------------EKRR 388
V+ F D A R Q H K + D++RL H L + +
Sbjct: 287 VELFQTDEAFRRQVFCNHFKHVFDLDRLAGRFHRLASAANDLDADAAPRGKKGGIFSRVK 346
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET 448
L+ +VKLY ++ + + L+ Y G +++ + +PL + FI LVE
Sbjct: 347 LSLEDLVKLYDCAVECTSLETTLRGYAGIHRESLEKAFTEPLSEAVKS--FSTFINLVEF 404
Query: 449 SVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV------DKA 502
++D+++ ++G ++IS +D+ L++L +++E L +++ +Q A D D+P +
Sbjct: 405 TIDMEEAKHGSFVISRRFDSELASLLDKKEELRSRMNR-ERQKAED-DIPFASRKRDTEI 462
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
+KL + G V R+TKK++ + ++ + K + FT ++L+ L +++ V E
Sbjct: 463 VKLIEDNTMGFVLRVTKKDQSAVLSS-RGRYHQVRLNKSELIFTTSELRGLCREFKDVAE 521
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
Y Q LV + + A ++ + LA +L LDVL +FA A++ P PY RP I D
Sbjct: 522 AYAAMQNSLVEKALLVAASYWPAVEKLAELLGMLDVLGAFAAAANAAPMPYVRPQIVEGD 581
Query: 623 VGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
G ++L+ SRHP +E Q + FI ND L R + IITGPNMGGKST+IRQV + +L
Sbjct: 582 TGGLVLKASRHPLLEIQPGTSSFIANDVHLDRERR-LAIITGPNMGGKSTYIRQVALTVL 640
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
+AQ+GSFVPC + + + RVGA D QLRGVSTF+ EM+E A+IL+ A +SL++I
Sbjct: 641 LAQIGSFVPCASCQLPIFTQVICRVGASDIQLRGVSTFLAEMVEAAAILRNANKQSLVVI 700
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTSTY+GFGLAWAI +HL E + +LFATHFHE+ L E + GV+
Sbjct: 701 DELGRGTSTYEGFGLAWAIAKHLAAEAKCLSLFATHFHEMGQLCEE---------VPGVS 751
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HVSA ++ +++L LY+++ G DQSFG+HVA FA P +VV AR+K+AELE
Sbjct: 752 NLHVSAAVNRETQQLAFLYRLQSGCVDQSFGVHVAGFAGLPATVVERARQKSAELE 807
>gi|17508445|ref|NP_491202.1| Protein MSH-2 [Caenorhabditis elegans]
gi|351060640|emb|CCD68358.1| Protein MSH-2 [Caenorhabditis elegans]
Length = 849
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 264/874 (30%), Positives = 451/874 (51%), Gaps = 66/874 (7%)
Query: 14 DAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD 73
D + L K+ +T A+ F R +Y++ +G++ATF+A + + ++ +D
Sbjct: 6 DEASDKALLKILKSKSPNTIAI--FSRGEYFSVYGDDATFVATNIFKSDVCVKTFTLSTD 63
Query: 74 ---ALSSVSVSKNMFETIARD-LLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVL 129
+ +SV++ +E + R+ ++L R ++ELY W++ K G+PGN +E +
Sbjct: 64 NSQQMKYISVNRGQYEKVVRETIVLLRC--SVELYSSEQGEWKMTKRGSPGNTVDFEQEI 121
Query: 130 FANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALG 189
+ D I+A++ + ++ + L D + ++E++D F+ E + L
Sbjct: 122 ----GVSDQAPILAIYIHPGDDDNRVTLCAWDAGNVRIVISEYIDTPSFSQTEQCIFGLC 177
Query: 190 CKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRD 249
E +L E + + K + TR V ++ K + + D+++ + + E +
Sbjct: 178 PTEYILVNEGSVAPKAKKIASMFTRMEVHNKQQLKPKSQWSDVIESVHLDYKDEAEKQNE 237
Query: 250 LVSGFEIAPGALGALLSYAELLSDESNYG-NYYIRKYSLDSYMRLDSAAMRALNVLE--- 305
+ L L S A +DE + Y I Y M +DS A+ AL + +
Sbjct: 238 NIKE------CLQILHSNA---ADEYSISEKYSIFNYGTHGNMLIDSCAVEALELFQLNY 288
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ + + N +L+ ++N+ C G++LL WL +PL ++ IN RLDIV+A ++ +RQ
Sbjct: 289 NYLEKSNNLTLYNVLNK-CKTLPGEKLLRDWLSRPLCQIDHINERLDIVEALFENQTIRQ 347
Query: 366 DLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL------QQYEGQF 418
LR L R+ D +L L R+ LQ + + YQ++ L + L +Q+
Sbjct: 348 KLRDSILARMPDCSQLARRL-MRKCTLQDLNRFYQAATLLETVEMQLIQLSEAEQFAPSI 406
Query: 419 SSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD-QLENGEYMISSSYDTGLSALKNEQ 477
+ L+K + L+ + +F L + D D + EN E + + + + +
Sbjct: 407 NRLLKSEITEILK------KVERFQVLCDEFFDFDYEKENKEIRVRVDFVPEIQEISEKL 460
Query: 478 ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE 537
E +ER L K+ ++ + LKLDK +Q+G FR+T KEE IRKK +LE
Sbjct: 461 EQMERVAEKLRKKYSAKFEC---DNLKLDKNSQYGFYFRVTLKEEKSIRKK---DVHILE 514
Query: 538 TRK-DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
T K GVKF+ +L + D++ + +Y ++E+++ + + A F + ++A +++ L
Sbjct: 515 TTKGSGVKFSVGELSDINDEFLEFHLKYTRAEEEVISMLCKKAEEFIPLIPAMAQLIATL 574
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKS 656
DV +S + A++ YTRP++ P + L+ RHP +E FIPND ++ K
Sbjct: 575 DVFVSLSTFAATSSGIYTRPNLLPLGSKRLELKQCRHPVIEGNSEKPFIPND--VVLDKC 632
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
I+TG NMGGKST++R ++IL+AQ+GSFVPC A+ISV D IF RVGA D Q +G+
Sbjct: 633 RLIILTGANMGGKSTYLRSAALSILLAQIGSFVPCSSATISVVDGIFTRVGASDKQSQGI 692
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EML+ ++IL+ AT S ++IDELGRGTST+DGFG+A AI + ++ I+ ++FAT
Sbjct: 693 STFMAEMLDCSAILQRATKNSFVVIDELGRGTSTFDGFGIASAIAQDILNRIQCLSIFAT 752
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
HFHE+ LA + G + I++ ++ MLYKV G SFG+ VA
Sbjct: 753 HFHEMGKLAEQP----------GAVALQMGVQIENN--EIHMLYKVFEGVAQCSFGLQVA 800
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAK 870
+ E+V+ KAA+L + ++ D K
Sbjct: 801 KMVGIDENVIN----KAAQLLEGLEKKLVIDSKK 830
>gi|308485160|ref|XP_003104779.1| CRE-MSH-2 protein [Caenorhabditis remanei]
gi|308257477|gb|EFP01430.1| CRE-MSH-2 protein [Caenorhabditis remanei]
Length = 856
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 266/863 (30%), Positives = 443/863 (51%), Gaps = 61/863 (7%)
Query: 29 PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG---TGSDALSSVSVSKNMF 85
PN + F R +Y+T +GE+A F+A + + ++ T S + +SV++ +
Sbjct: 22 PN---TIAIFSRGEYFTVYGEDANFVATNIFKSDVCVKTFTLCTTESQQMKYISVNRGQY 78
Query: 86 ETIARD-LLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVAL 144
E + R+ ++L R ++ELY W+++K G+PGN +E + ++ PV+
Sbjct: 79 EKVVRETVVLLRC--SVELYASEQGEWKMIKRGSPGNTVEFEQEIGVADQ---APVLAVY 133
Query: 145 FPNFRENGCT------IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTE 198
++ C + L D L +EF+D F+ +E + L E L
Sbjct: 134 IHPGEDDVCKKICSNRVTLCAWDSGNVRLVTSEFIDTPSFSQIEQCIFGLCPTEYYLING 193
Query: 199 AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAP 258
A+ S K L + T+ V + K + + ++++ + + R E + V
Sbjct: 194 ALASPRIKKLSNMFTKMDVHCKQALKPKSEWQNMLDCIHQEYREEAEKQSNSVKE----- 248
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE---SKTDANKNFS 315
L L +A + + N Y I Y M++DS A+ AL + + + + + N +
Sbjct: 249 -CLQTL--HANVADEYRNSEKYSIFNYGTHGNMQIDSCAVDALELFQLNYNYLEKSNNLT 305
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRI 374
L+ ++N+ C G++LL WL +PL ++ IN RLD+V++ + + +RQ LR L R+
Sbjct: 306 LYNVLNK-CKTLPGEKLLRDWLSRPLCSIDHINERLDVVESLLGNQNVRQKLRDSFLARM 364
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY--EGQFSSLIKERYLDPLES 432
D +L L R+ LQ + + YQ++ L + L Q + +FS+ I +R L E
Sbjct: 365 PDCSQLARRL-MRKCTLQDLNRFYQAATLLESVEMQLIQLSEDKRFSASI-DRLLKS-EV 421
Query: 433 LTDDDHLNKFIALVETSVDLD-QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
+ +F L + D D + E+ E + + + + + + + + L K+
Sbjct: 422 TAILKKVERFQVLCDEFFDFDYEKEHKEIRVRVDFVPEIQEISEKLDQVNKIAEKLRKKY 481
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK-DGVKFTNTKL 550
++ + ++KLDK +Q+G+ FR+T KEE IRKK +LET K GVKFT +L
Sbjct: 482 SAKFEC---DSMKLDKNSQYGYYFRVTLKEEKSIRKK---DVHILETTKGSGVKFTVGEL 535
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
+ D++ + +Y ++E++ + A F + ++A +++ LDV +S A +S
Sbjct: 536 SDINDEFLEFHLKYTRAEQEVITMLCNKAEEFIPLIPAMAQLIATLDVFVSLATFSSMSS 595
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
Y+RP++ P + L+ RHP +E+ FIPND +I K+ I+TG NMGGKS
Sbjct: 596 GIYSRPELLPLGSKLLELKQCRHPVIESISEKPFIPND--VILEKNRLIILTGANMGGKS 653
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++R ++IL+AQ+G FVPC A ISV D IF RVGA D Q +G+STFM EML+ ++IL
Sbjct: 654 TYLRSAALSILLAQIGCFVPCSSAKISVVDGIFTRVGASDKQSQGISTFMAEMLDCSAIL 713
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
+ AT+ S ++IDELGRGTST+DGFG+A AI + ++ IR ++FATHFHE+ LA +
Sbjct: 714 QRATENSFVVIDELGRGTSTFDGFGIASAIAQDILNRIRCLSVFATHFHEMGKLAEQP-- 771
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
G + I+ ++ MLYKV G SFG+ VA+ ESV+ A
Sbjct: 772 --------GAVALQMGVQIEKN--QIHMLYKVSEGVAQCSFGLKVAKMVGLDESVINKAS 821
Query: 851 EKAAELEDFTPSAVISDDAKIEV 873
E LE +I +D K E+
Sbjct: 822 EL---LEGLEKKVIIDNDKKKEL 841
>gi|389585707|dbj|GAB68437.1| DNA mismatch repair enzyme [Plasmodium cynomolgi strain B]
Length = 793
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/768 (31%), Positives = 410/768 (53%), Gaps = 69/768 (8%)
Query: 141 IVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAV 200
I+ L+ + ++ T+G+ + + K + EF+D+ +FT +ES + +C +
Sbjct: 14 ILCLYIDTKKYQKTLGVCFYNYLKYEFLMTEFIDNGYFTALESLFIQKRPYKCFFNSMND 73
Query: 201 KSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI--AP 258
+ + L + C + ++ ++ +L ++L +L+ + VR+ E+ A
Sbjct: 74 LVDD-ERLLNLFKMCNIEAVALERKKYDVSNLKEEL-KLIIPQNDDVRNYDKHLELENAC 131
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK---TDANKNFS 315
L L+++ ++ ++ + I +++D YMRLD AA+ ALN+L +K + N +
Sbjct: 132 KCLMVLINHLKVKENKDIHNQCSINIHNMDLYMRLDKAAINALNILPNKKNTNSYSNNTN 191
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRI 374
L +N+ C +G + L WL QPL V EIN RL+IV+ F+++ LR + +LKRI
Sbjct: 192 LLKFLNK-CNTTIGCKKLMSWLTQPLTSVAEINKRLNIVETFIEEDDLRNSVYCNYLKRI 250
Query: 375 SDIERLMHNLEKRRAG--------------LQQIVKLYQSSIRLPYIRSALQQYEGQFSS 420
++++L H L++ L+ IVKLY + + I AL EG+
Sbjct: 251 PELDKLNHYLKEINQNNELKGNSKYNEEMILKDIVKLYYAILDFKEIYFALVSIEGKHKQ 310
Query: 421 LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQES 479
+ E ++PL + ++ +K + ++E ++DL ++E N Y+IS ++D L + NE+ +
Sbjct: 311 TVIEMIVNPLHEILNN--FSKLLDMIEMTIDLKEIEENKVYLISKNFDEELEEISNEKNA 368
Query: 480 LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV-----------FRITKKEEPKIRKK 528
L ++I HK+ + DL DK + K T + FR++KK+ I+ +
Sbjct: 369 LMKKIKR-HKEDV-ERDLFSDKCDRRYKRTNREDIRLVDCNTNVFLFRVSKKDSTLIQHQ 426
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+FI + K FT + LK L QY+ L Y Q E+V + I T++ + +
Sbjct: 427 --KKFISVRMNKSEFLFTTSTLKGLCKQYEHCLNIYNTLQLEIVKKTICAVSTYTPVIEK 484
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPN 647
++S LDV PT D ++I++ SRHP +E Q + NFIPN
Sbjct: 485 FIDIVSTLDV-----------PTV-------VEDGENVIMKKSRHPLLELQHNLSNFIPN 526
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
D + + +S I+TGPNMGGKST+IRQ + ++AQ+G FVPCD I V + RVG
Sbjct: 527 DIHMNKKESRLIIVTGPNMGGKSTYIRQTAIICILAQIGMFVPCDFCEIPVFSQVMCRVG 586
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
A D QL+G+STF+ EM+E ++I+K A S II+DELGRGTSTY+G G++W+I +++++
Sbjct: 587 ASDFQLKGISTFLSEMIEASAIVKNADKNSFIIVDELGRGTSTYEGLGISWSIGKYILDH 646
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGAC 827
I+ LFATHFHE++ +A+ Q GV N HV ID +K+ LY+++ GA
Sbjct: 647 IKCFCLFATHFHEISNIAY---------QCEGVINRHVETTIDQKQKKICFLYEIKDGAS 697
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
++S+G++VAE A P+ V+ A EK ELE + + I+ S
Sbjct: 698 NKSYGVNVAEIAKLPKDVIRKAYEKVEELESAENKYYLKEKLNIDTSS 745
>gi|341876712|gb|EGT32647.1| hypothetical protein CAEBREN_29612 [Caenorhabditis brenneri]
Length = 867
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 268/890 (30%), Positives = 458/890 (51%), Gaps = 80/890 (8%)
Query: 14 DAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG---T 70
D + L K+ +T A+ F R +Y+T +G++A F+A + + ++
Sbjct: 6 DEGSDKALLKILKSKSPNTIAI--FSRGEYFTVYGDDAVFVATNIFKSDVCVKTFTLCTN 63
Query: 71 GSDALSSVSVSKNMFETIARD-LLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVL 129
S + +SV++ +E + R+ ++L R ++EL+ W+++K G+PGN +E +
Sbjct: 64 DSQQMKFISVNRGQYEKVVRETIVLLRC--SVELFTSEQGEWKMIKRGSPGNTVEFEQEI 121
Query: 130 FANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALG 189
+ D ++A++ + +N + L D + +EF+D F+ +E + L
Sbjct: 122 ----GVADQAPVLAVYIHPGDNDNRVTLCAWDAGNVRIVTSEFIDTPSFSQIEQCIFGLC 177
Query: 190 CKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVR 248
E +L + + K L T+ V ++ KT + D+++ + +G +E
Sbjct: 178 PTEYILVNSLSSATPNAKKLSSMFTKMEVHNKQQLKTPSEWEDVLKCIHEDYKGEIEKQS 237
Query: 249 DLVSGFEIAPGALGALLSYAELLSDESNYG---NYYIRKYSLDSYMRLDSAAMRALNVLE 305
+ V L L S A +DE YG Y I Y M++DS A+ AL + +
Sbjct: 238 ESVKT------CLQLLHSNA---ADE--YGPSEKYSIFSYGAHGIMQIDSCAVDALELFQ 286
Query: 306 SK--------------------TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVN 345
T+ + N +L+ ++N+ C G++LL WL +PL +++
Sbjct: 287 LNYNYLGKAVVIKTTFIIFFLFTEKSNNLTLYNVINK-CKTLPGEKLLRDWLSRPLCNID 345
Query: 346 EINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
IN RLDIV+A +++ +RQ LR L R+ D +L L R++ LQ + + YQ++ L
Sbjct: 346 HINERLDIVEALIENQTVRQKLRDSFLARMPDCSQLARRL-IRKSTLQDLNRFYQAATLL 404
Query: 405 PYIRSALQQY--EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD-QLENGEYM 461
+ L Q +FS+ I ER L E + +F L + D D + EN E
Sbjct: 405 ESVEMQLIQLCENEKFSASI-ERLLKS-EVTAILKKVERFQILCDEFFDFDYEKENKEIR 462
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
+ + + + + + +E+ L K+ A+ + ++KLDK Q+G+ FR+T KE
Sbjct: 463 VKVDFVPEIQEISEKLDKVEKIAEKLRKKYATKFEC---DSMKLDKNAQYGYYFRVTLKE 519
Query: 522 EPKIRKKLTTQFIVLETRK-DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
E IRKK +LET K GVKFT +L + D++ +Y ++E+++ + + A
Sbjct: 520 EKSIRKK---DVHILETTKGSGVKFTVGELSDINDEFLDFHLKYIRAEEEVISMLCKKAE 576
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQD 640
F + +++ +++ LDV +S + A+S Y RP++ P + L+ RHP +E
Sbjct: 577 EFIPLIPAMSQLIATLDVFVSLSTFAASSSGIYCRPNLLPLGSKQLNLKQCRHPVIEGNS 636
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
FIPND ++ ++ ++TG NMGGKST++R ++IL++Q+GSFVPC A+ISV D
Sbjct: 637 DKPFIPND--VVLDENRLIVLTGANMGGKSTYLRSAALSILLSQIGSFVPCTSATISVVD 694
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
IF RVGA D Q +G+STFM EML+ ++IL+ AT+ S ++IDELGRGTST+DGFG+A AI
Sbjct: 695 GIFTRVGASDKQSQGISTFMAEMLDCSAILQRATENSFVVIDELGRGTSTFDGFGIASAI 754
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
+ ++ I+ ++FATHFHE+ LA + G + +++ ++ MLY
Sbjct: 755 AQDILNRIKCLSIFATHFHEMGKLAEQE----------GAVALQMGVQVENN--EINMLY 802
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAK 870
KV G SFG+ VA+ ESV+ KA++L + V+ D+ K
Sbjct: 803 KVFDGVAQCSFGLQVAKMVGIDESVIN----KASKLLEGLEKKVVFDNEK 848
>gi|296004826|ref|XP_002808765.1| DNA mismatch repair protein, putative [Plasmodium falciparum 3D7]
gi|23499288|emb|CAD51365.1| PF00_0002 [Plasmodium falciparum 3D7]
gi|29650350|gb|AAO86765.1| DNA mismatch repair enzyme [Plasmodium falciparum]
gi|225632149|emb|CAX64038.1| DNA mismatch repair protein, putative [Plasmodium falciparum 3D7]
Length = 873
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 241/821 (29%), Positives = 417/821 (50%), Gaps = 113/821 (13%)
Query: 133 NEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKE 192
+E +D +++ + R N +G+ D+ L E++++ HFT +ES L+
Sbjct: 5 DECEDKSRVISFNLDVRNNIRYVGICIYDIYSNEFSLCEYIENEHFTVLESILLQTRPSS 64
Query: 193 CLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS-VEPVRDLV 251
CL + K E K + L C + E K +++ + DL +L++GS ++ +
Sbjct: 65 CLYLSHNEKIDE-KRINLILNLCDIKSKELPKIYYESCSIENDLMKLLKGSDIKQCVHFL 123
Query: 252 SGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV---LESKT 308
+ ++A L +++ + +LL+D + ++ Y ++ Y++LD AAM ALN+ +
Sbjct: 124 TDLQLACKCLCSIVKHLDLLNDNGSINKCILKNYHINKYLKLDKAAMVALNIYDDIHIDY 183
Query: 309 DANKN-----------FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF 357
+NKN +L+ +N+ C +G+R L W+ P+ D +IN RLD+V+ F
Sbjct: 184 GSNKNTTKINSSSANTLTLYKFLNK-CKTKIGQRKLLNWIIHPIRDEKKINERLDMVEIF 242
Query: 358 VDDTALRQDLRQ-HLKRISDIERLM----------------------------HN----- 383
+++ +R ++ +L+++ D++ ++ HN
Sbjct: 243 KEESVIRSIIQSDYLRKVCDLQIIIKKFKTTSSYLNDTKDNIKGSNNNDNIYDHNNNNTM 302
Query: 384 -----------LEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL-E 431
K L+ +VKLY + + I L Y+G + ++ L PL E
Sbjct: 303 IMKKKNYNIIFKSKHSCNLEDLVKLYDTIVVSKKIYYLLNDYKGTNQDTLNKKILKPLGE 362
Query: 432 SLTDDDHLNKFIALVETSVDLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
L L ++ L+E ++D +++E Y+IS ++D L L +++++ I +
Sbjct: 363 CLIK---LEPYLKLIELTIDFEEIEKQNNYLISRTFDDDLDLLATQKDNIYNLIKEHRLE 419
Query: 491 TASDLDL-------------------------------PVDKALKLDKGTQFGHVFRITK 519
D+ + + +KL + +FR K
Sbjct: 420 VEEDIQYLKGKEKIKKKATTSKLIGGTINNSNNNYNNNNIKEDIKLVECNINIFLFRAVK 479
Query: 520 KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
K+ I+++ +I + K+ + F KLK L QY+ +L +Y Q+ L ++ IQ A
Sbjct: 480 KDINYIQERKNI-YIQVRMNKNEILFHTNKLKNLCRQYEHILNQYNIAQESLAHKAIQVA 538
Query: 580 VTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII-LEGSRHPCVEA 638
++ E L+ ++S++D+ SF + S + Y RP+I + G I+ ++ SRHP VE+
Sbjct: 539 CSYWEPIIILSKIISDIDIFCSFGFICCSSISTYVRPEI--EENGHILHMKNSRHPLVES 596
Query: 639 QDWV--NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
+ NFIPND + + + IITGPNMGGKST+IRQ+ + +MA +G FVPC A I
Sbjct: 597 NLLLINNFIPNDVYMNKDITRLNIITGPNMGGKSTYIRQIALICVMAHIGCFVPCTYAKI 656
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
+ I RVG+ D QL+G+STF EM+E A+I+K A SLIIIDELGRGTSTY+GFG+
Sbjct: 657 PIFTQIMCRVGSSDIQLKGISTFFSEMIEIAAIIKNADQNSLIIIDELGRGTSTYEGFGI 716
Query: 757 AWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
+W++ +++ I+ LFATHFHE++ L E GV N HV A ID+ +K+
Sbjct: 717 SWSVAHYILNTIKCFCLFATHFHEMSNLEDEYK---------GVINNHVGAKIDTEKKKI 767
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ LY+++ G D+S+G++VA+ A P+SV+ A +K+ ELE
Sbjct: 768 SFLYEIKKGYADKSYGVYVAQIAQLPKSVIHKAFQKSKELE 808
>gi|397576511|gb|EJK50299.1| hypothetical protein THAOC_30749 [Thalassiosira oceanica]
Length = 874
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 251/680 (36%), Positives = 370/680 (54%), Gaps = 70/680 (10%)
Query: 278 GNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA--------NKNFSLFGLMNRTCTAGMG 329
G+ I + +LDS++ +D A A+++L ++ + N SL+G++N+ C MG
Sbjct: 204 GSVRIVRGTLDSHLAIDRTAAEAIHLLPPRSSGAALLQGGNDANNSLYGVLNQ-CKTKMG 262
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH---LKRISDIERLMHNLEK 386
R L +WL+QPL D+ I R + V D++ R LR+ R D+++L L
Sbjct: 263 SRTLEVWLRQPLTDLEAIMRRQNAVAKLFDESIGRDRLREEGLASLRGMDLDKLARRLTA 322
Query: 387 RRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH-------- 438
L +S L +L Q Q ++ L+ LE LT +D
Sbjct: 323 YGRAKANGTPLGSTSKAL----ESLYQVH-QLANTCLPPLLEVLEELTGNDEQQDEENDC 377
Query: 439 ---------------LNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
L K L E +D D+ ++++S+ ++ L LK + + ++ +
Sbjct: 378 ILNLAYQGLNKKCFELEKASDLAEKVIDFDEAPR-NFLVNSTLNSELCDLKADLDGVQEE 436
Query: 484 IHSLHKQTASDLDLPVDKA--LKLDKGTQFGHV-----FRITKKEEPKI-RKKLTTQFIV 535
+ +LH S + K+ +KL+ + G+ FR+ K+ +L V
Sbjct: 437 LEALHADMNSQWEEIKGKSDQVKLEDVAEKGNTSCVWQFRLADSNAIKLLSTELNQDVKV 496
Query: 536 LETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSE 595
+ K+GV FT +L +LG + + ++E+Y++ Q+ +V + A TF + + + +L++
Sbjct: 497 SKILKNGVWFTTKELDQLGSKKKGLMEDYQDKQRAIVVNCMSVAATFVPVIERCSVLLAQ 556
Query: 596 LDVLLSFADLASSCPTPYTRPDI-NPPDVG-DIILEGSRHPCVEAQDWVNFIPNDCKLIR 653
LDV+ S A +A+ Y RP + + +VG I L+ +RHPCVE QD +NFI ND L+
Sbjct: 557 LDVIASLAHVAAYSSNGYCRPQLTDGEEVGLGIELKEARHPCVELQDDMNFIANDFNLVF 616
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
G S FQ++TGPNMGGKST+IR + + MAQ+GSFVPC A I++ + ARVGAGD Q
Sbjct: 617 GSSSFQLVTGPNMGGKSTYIRSLAAIVTMAQIGSFVPCSAAKINIIHHLLARVGAGDAQD 676
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
RG+STFM EMLE++SIL+ AT RSLIIIDELGRGTST+DG+GLA AI EH+V++I T+
Sbjct: 677 RGISTFMAEMLESSSILRTATKRSLIIIDELGRGTSTFDGYGLAKAISEHIVQKIGCITV 736
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATHFHELTAL + A+ V N HVSAH D LT LY+V PG C +SFGI
Sbjct: 737 FATHFHELTALEGQEAS---------VVNCHVSAHSDRQD-GLTFLYEVRPGPCLESFGI 786
Query: 834 HVAEFANFPESVVTLAREKAAELEDFT-PSAVISDDAKIEVGSKRKRISDPNDMSRGAAR 892
VAE AN P SVV A+ KA LE+F V S D + E G N+ S +
Sbjct: 787 AVAEMANMPPSVVNEAKRKARMLENFDYRKRVKSSDEENECGD--------NESSETVSA 838
Query: 893 AHQFLKEFSDMPLETMDLKE 912
A + L +F MP+ M+ E
Sbjct: 839 AMECLHKFRKMPVGEMNEDE 858
>gi|414866817|tpg|DAA45374.1| TPA: hypothetical protein ZEAMMB73_164133 [Zea mays]
Length = 855
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/342 (57%), Positives = 246/342 (71%), Gaps = 31/342 (9%)
Query: 34 AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLL 93
AV+ RDYYT HGE A FIA+TYYHT +ALR LG+ S +SSV VSK MFETI R +L
Sbjct: 90 AVQKESDRDYYTVHGEKAMFIARTYYHTISALRHLGSNSGGISSVGVSKAMFETIVRKIL 149
Query: 94 LERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGC 153
L+RTD TLELYEGSGS+WRL KSG PGN+G +ED+LF NN+MQ++PV
Sbjct: 150 LDRTDCTLELYEGSGSDWRLTKSGKPGNIGGFEDILFINNDMQESPV------------- 196
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
+T R LGLAEF +D+ FTNV SAL+AL L + KS +L+DA+T
Sbjct: 197 --------MTNRKLGLAEFREDNRFTNVGSALLAL-----CLTADCEKSINSHSLQDAIT 243
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
+C ++LTERKK+ FK++DLVQDL+ ++GSV+ V DL+S F+ + GALGALLSYAELL++
Sbjct: 244 KCSILLTERKKSNFKSKDLVQDLEE-IKGSVKLVCDLISQFDYSLGALGALLSYAELLAN 302
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
++NYGNY I KY+LD YMRLDSA + AL + E KTD NKNF LFGL+NRTCT MGKRLL
Sbjct: 303 DTNYGNYTIEKYNLDCYMRLDSAVVLALTIHEEKTDVNKNFYLFGLVNRTCTVEMGKRLL 362
Query: 334 HMWLKQPLLDVNEINARLDIVQA----FVDDTALRQDLRQHL 371
+ WLKQPLLDVNEI +RL +VQA F T +R ++ H+
Sbjct: 363 NQWLKQPLLDVNEITSRLYMVQAAISTFDTKTTIRTVVQIHM 404
>gi|71032669|ref|XP_765976.1| DNA mismatch repair protein MSH2 [Theileria parva strain Muguga]
gi|68352933|gb|EAN33693.1| DNA mismatch repair protein MSH2, putative [Theileria parva]
Length = 790
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 240/732 (32%), Positives = 392/732 (53%), Gaps = 45/732 (6%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
+G+ ++ ++ + ++E D+ +FTN+ES ++ + C+L S + K + +
Sbjct: 50 VGISLINFSENAIKVSEISDNEYFTNLESLILQINPSNCVLAIPK-DSLDYKRINHVIAV 108
Query: 215 CGVMLTERKKTEFKTRDLVQDLDRLVRGSVE-------PVRDLVSGFEIAPGALGALLSY 267
C + T K K DL+ D V S+E V++ + + L+
Sbjct: 109 CN-LKTTFKFINNKEIDLLDDFK--VTNSLEYLLMDDDSVKNHMKEISLKLAMKAFCLTA 165
Query: 268 AELLSDESNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTA 326
+ + NY +++ + Y++D+Y+ LD AA AL++L SL+ L+N+ C
Sbjct: 166 DFINYKDRNYKSHFTLSIYTMDNYLCLDRAAFNALSILPHNNQQCVKMSLYDLLNK-CRT 224
Query: 327 GMGKRLLHMWLKQPLLDVNEINARLDIVQAF------VDDTALR--QDLRQHLKRISDIE 378
+G +LL MW+ QPL+ V +I R D V+AF + LR Q+L Q L + + +
Sbjct: 225 SIGSQLLKMWITQPLVSVVDIKKRQDCVEAFKSMYRTIQSECLRKVQNLDQILTKFKNFD 284
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS-ALQQYEGQFSSLIKERYLDPLESLTDDD 437
+ ++ + +V LY I + ++Y+G S I+E + +PL ++
Sbjct: 285 MGVETKCTKQPSFEDLVVLYDCIISANRLNQFTFKRYDGVHSHTIRELFAEPLSKISS-- 342
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
++ LVE +VDL + EN Y+ + ++D L + ++ + + I + ++L
Sbjct: 343 KFESYLRLVEKTVDLKEAENRVYVFNRNFDESLKKISSKLDQIRYDIEMQRQAIQNELPY 402
Query: 498 PVDKA---LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR--KDGVKFTNTKLKK 552
K +K+ + G +FR+ KK+ P + K + + R K+ FT KL++
Sbjct: 403 SSGKKGNQVKIVECNTLGFLFRVAKKDHPSLMKAQIPGVSIEKVRLNKNEFLFTTAKLRR 462
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
Y+ LE Y+ Q +V R + A T+ + + +++ LDVL +FA++A+
Sbjct: 463 QCTLYKNTLELYEESQDLMVKRTFKVACTYWTLLERFIKIIATLDVLTAFAEVAT--LFN 520
Query: 613 YTRPDINPPDVGDII-LEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKS 670
Y RP I+ + G + L +RHP VE N FIPND + R +S QIITGPNMGGKS
Sbjct: 521 YVRPTID--ETGKTVNLTEARHPLVEYVLSSNSFIPNDLYMERDRSRVQIITGPNMGGKS 578
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T+I+Q+G+ ++ Q+GSFVPC +A + + I R+GA D Q RGVSTF+ EM+E+A+IL
Sbjct: 579 TYIKQIGLIAILNQIGSFVPCKKAKLPIFKHILCRIGASDIQQRGVSTFLAEMVESAAIL 638
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
+ A + SL+IIDELGRGTST+DGFGL+WAI L+E + L ATHFHE+ +LA E+
Sbjct: 639 RIANEHSLVIIDELGRGTSTHDGFGLSWAIVVDLIERAKCFCLCATHFHEMGSLALEH-- 696
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
GV N H++A + +T LYKV+ G C +SFGI+VA A FP+ V+ A+
Sbjct: 697 -------FGVVNKHLTAQFYDSINSMTFLYKVKDGVCKKSFGINVAIIAKFPQDVIESAQ 749
Query: 851 EKAAELE-DFTP 861
K ELE ++P
Sbjct: 750 NKLKELERKYSP 761
>gi|414586663|tpg|DAA37234.1| TPA: hypothetical protein ZEAMMB73_988752 [Zea mays]
Length = 679
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/335 (58%), Positives = 245/335 (73%), Gaps = 31/335 (9%)
Query: 41 RDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLLERTDHT 100
RDYYTAHGENA FIA+TYYHT +ALR LG+ S +SSV VS+ MFETI R +LL+RTD T
Sbjct: 313 RDYYTAHGENAMFIARTYYHTISALRHLGSNSGGISSVGVSEAMFETIVRKILLDRTDCT 372
Query: 101 LELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYV 160
L+ YEGS S+WRL KSG PGN+G +ED+LF NN+MQ++PV
Sbjct: 373 LDFYEGSSSDWRLSKSGKPGNIGGFEDILFINNDMQESPV-------------------- 412
Query: 161 DLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLT 220
+T R LGLAEF +DS FTNV SAL+AL CL + KS +L+DA+T+C ++LT
Sbjct: 413 -MTNRKLGLAEFREDSRFTNVGSALLAL----CLT-ADCEKSINSHSLQDAITKCSILLT 466
Query: 221 ERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNY 280
ERKK+ FK++DLVQDL++ +R SV+ V DL+S F+ + GALGALLSYAELL++++NYGNY
Sbjct: 467 ERKKSNFKSKDLVQDLEK-IRSSVKLVHDLISQFDYSLGALGALLSYAELLANDTNYGNY 525
Query: 281 YIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQP 340
I KY+LD YMRLDSAA+RAL + E KTD NKNF LFGL+NRTCT MGK LL+ WLKQP
Sbjct: 526 TIEKYNLDCYMRLDSAAVRALTIHEEKTDVNKNFYLFGLVNRTCTVEMGKILLNQWLKQP 585
Query: 341 LLDVNEINARLDIVQA----FVDDTALRQDLRQHL 371
LLDVNEI +RL +VQA F T +R ++ H+
Sbjct: 586 LLDVNEITSRLYMVQAAISTFDTKTTIRTVVQIHM 620
>gi|403220803|dbj|BAM38936.1| DNA mismatch repair protein Msh2 [Theileria orientalis strain
Shintoku]
Length = 795
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 249/782 (31%), Positives = 411/782 (52%), Gaps = 74/782 (9%)
Query: 118 TPGNLGS-YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDS 176
T GN GS Y+ + + + +P++ +G+ ++++ L E D+
Sbjct: 23 TEGNRGSDYDLKILSVVVLSSSPIVKQ-----------VGIFLFNISEFTLKACEIADNE 71
Query: 177 HFTNVESALVA---LGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLV 233
+FTN+ES ++ + C+L S + K L T C + + + +T +D+
Sbjct: 72 YFTNLESLILQVSEINPSNCVLGINK-DSLDYKRLNHVFTVCNLPCSYKFQT---VKDIT 127
Query: 234 QDLDRLVRGSVEPVRDLVS------------GFEIAPGALGALLSYAELLSDESNYGNYY 281
+L + L+S +A A + Y + + +
Sbjct: 128 SVDGKLHFKVTNSLEFLLSKDDELKNHTKEVSMRLAMKAFCLVTDYVKY-QERGFKARFT 186
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ Y++DSY+ +D AA +L++L T AN+ S++ L+N+ C +G +LL MW+ QPL
Sbjct: 187 LSTYTMDSYLCMDRAAFGSLSILPLNT-ANQKVSVYDLLNK-CRTSIGSQLLKMWISQPL 244
Query: 342 LDVNEINARLDIVQAF------VDDTALR--QDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
+D +I R D V+ F + LR Q++ L + + E + ++ +
Sbjct: 245 VDPEQIRKRHDCVEVFRSMYRTIQAECLRKVQNMDLILLKFKNFEMGIDARNSKQPTFED 304
Query: 394 IVKLYQSSIRLPYIRS-ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDL 452
+V LY I + + L++Y G + IK+ +++PL ++ ++ LVE ++DL
Sbjct: 305 LVTLYDCIISVNRLNQFTLKKYTGAHADTIKQTFIEPLSKISSK--FESYLRLVERTIDL 362
Query: 453 DQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA-----LKLDK 507
+ EN Y+ + ++D L L + + + ++ + +Q D +LP +KL +
Sbjct: 363 KEAENRNYLFNRNFDENLKELSAKLDKIRSEMEA-QRQAIQD-ELPYSSMKKGNLVKLVE 420
Query: 508 GTQFGHVFRITKKEEPKIRKKLTTQFIVLETR--KDGVKFTNTKLKKLGDQYQKVLEEYK 565
+ R+ KKE+ +++ + + R K+ FT KL+K QY+ + EY+
Sbjct: 421 CNTMVFLLRVPKKEQNNVQRCNLPGITIEKVRLNKNEFLFTTQKLRKQCTQYKNTMAEYE 480
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
CQK +VNR + A T+ + + +++ LDVL +FA++++ Y RP+I+ +
Sbjct: 481 ECQKLMVNRTFKVACTYWALLERFIKVVATLDVLTAFAEVST--IFNYVRPEIDESG-EN 537
Query: 626 IILEGSRHPCVEAQDWV----NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
+ L +RHP VE +V +FIPND + R S I TGPNMGGKST+I+QVG+ +
Sbjct: 538 VHLVEARHPLVE---YVLADHSFIPNDLHMNRHTSRVHITTGPNMGGKSTYIKQVGIIAV 594
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
M Q+GSFVPC A + + + R+GA D QLRGVSTF+ EM+E+++IL+ A + SL+II
Sbjct: 595 MNQIGSFVPCKAAKLPIFRHVLCRIGASDIQLRGVSTFLAEMVESSAILRMANEHSLVII 654
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DELGRGTST+DGFGL+WAI L+E + L ATHFHE+ ALA E+A GV
Sbjct: 655 DELGRGTSTHDGFGLSWAILVDLIERAKCFCLCATHFHEMGALAQEHA---------GVV 705
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE-DFT 860
N H++A + +T LYKV+ G C +SFGI+VA ANFP+ VV AR++ ELE +
Sbjct: 706 NKHLTAQFFGDTNTMTFLYKVKDGVCKKSFGINVALIANFPKDVVESARKRLDELERKYQ 765
Query: 861 PS 862
PS
Sbjct: 766 PS 767
>gi|407043328|gb|EKE41884.1| DNA mismatch repair protein Msh2, putative [Entamoeba nuttalli P19]
Length = 630
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 214/625 (34%), Positives = 359/625 (57%), Gaps = 39/625 (6%)
Query: 288 DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
D+ M ++ A+ L++ K K +LF +NRT T +G++++ W+KQPL+D ++I
Sbjct: 7 DNAMIIEEDAIEGLHLFGDK----KEMTLFKHLNRTHTK-IGEKMIKEWIKQPLIDKDKI 61
Query: 348 NARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPY 406
N RL++V+ F D++ +R ++ + L I D+E+L+ + K + L+ IVKLY++
Sbjct: 62 NKRLELVEGFYDNSGIRLKIKNEELAIIPDLEKLIKGINK--SDLESIVKLYEAVRISKN 119
Query: 407 IRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSY 466
I+ L++ + I++ ++PLE +T++ + KF +V T +D+++ +N + I +
Sbjct: 120 IKEELKEMNNKS---IEKEIIEPLEKITEE--MEKFEEMVVTLIDIEETQNHVFKIREDF 174
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
D GL ++ + +E +Q A+DL++ DK ++ + R++K E
Sbjct: 175 DEGLQKIRESHKKVEELFEKCLEQAANDLNIKTDKIKIVEHNNNL--ILRVSKSNEK--E 230
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K ++ +++T K KFT +++ L + K+ + + K+ + + + + E F
Sbjct: 231 VKKNKKYTIIQTLKGECKFTFKEMQTLNVKRDKLKLKEEEINKKFIEEINKVVEGYKEKF 290
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIP 646
+ L M+ +D + SFA ++ Y++P I + G I + +RHP +E +FI
Sbjct: 291 QELENMIGYIDCIQSFATVSIDNNQGYSKPTIYESEKGIIKIIKARHPLIENNSINSFIE 350
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND + R ++ FQIITGPNMGGKST++R +G+ ++MAQ+G F+PC A IS+ D I R+
Sbjct: 351 NDIDIDRKETRFQIITGPNMGGKSTYLRMIGLCVIMAQIGMFIPCSEAHISICDKIMCRI 410
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GAGD + G+STFM EM +T+ I+K +T SL++IDELGRGTSTYDGFG+AWAI E+L
Sbjct: 411 GAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLIDELGRGTSTYDGFGIAWAISEYLAI 470
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGA 826
+I +FATHFHE+T L K++ GV N HV A D ++L + YK+ G+
Sbjct: 471 DIGCYCVFATHFHEITGLE---------KRVTGVINKHVEA--DIIDKQLVLKYKINNGS 519
Query: 827 CDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISD---- 882
DQS I+VAE+A+FP VV A+ KA EL+ P + KIE+ + + + D
Sbjct: 520 TDQSLAIYVAEWADFPHEVVESAKRKAKELDLDQPDS----KRKIELFTNKIPLLDDEIP 575
Query: 883 ---PNDMSRGAARAHQFLKEFSDMP 904
P D+ G + QF+ ++ P
Sbjct: 576 QITPEDILNGKSIISQFIHDYKSTP 600
>gi|183234797|ref|XP_652571.2| DNA mismatch repair protein Msh2 [Entamoeba histolytica HM-1:IMSS]
gi|169800906|gb|EAL47185.2| DNA mismatch repair protein Msh2, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 630
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/625 (34%), Positives = 358/625 (57%), Gaps = 39/625 (6%)
Query: 288 DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
D+ M ++ A+ L++ K K +LF +NRT T +G++++ W+KQPL+D ++I
Sbjct: 7 DNAMIIEEDAIEGLHLFGDK----KEMTLFKHLNRTHTK-IGEKMIKEWIKQPLIDKDKI 61
Query: 348 NARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPY 406
N RL++V+ F D++ +R ++ + L I D+E+L+ + K + L+ IVKLY++
Sbjct: 62 NKRLELVEGFYDNSGIRLKIKNEELAIIPDLEKLIKGINK--SDLESIVKLYEAVRISKN 119
Query: 407 IRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSY 466
I+ L++ + I++ ++PLE +T++ + KF +V T +D+++ +N + I +
Sbjct: 120 IKEELKEMNNKS---IEKEIIEPLEKITEE--MEKFEEMVVTLIDIEETQNHVFKIREDF 174
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
D GL ++ + +E +Q A+DL++ DK ++ + R++K E
Sbjct: 175 DEGLQKIRESHKKVEELFEKCLEQAANDLNIKTDKIKIVEHNNNL--ILRVSKSNEK--E 230
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K ++ +++T K KFT +++ L + K+ + + K+ + + + + E F
Sbjct: 231 VKKNKKYTIIQTLKGECKFTFKEMQTLNVKRDKLKLKEEEINKKFIEEINKVVEGYKEKF 290
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIP 646
+ L M+ +D + SFA ++ Y++P I + G I + +RHP +E +FI
Sbjct: 291 QELENMIGYIDCIQSFATVSIDNNQGYSKPTIYESEKGIIKIIKARHPLIENNSINSFIE 350
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND + R ++ FQIITGPNMGGKST++R +G+ ++MAQ+G FVPC A IS+ D I R+
Sbjct: 351 NDIDIDRKETRFQIITGPNMGGKSTYLRMIGLCVIMAQIGMFVPCSEAHISICDKIMCRI 410
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GAGD + G+STFM EM +T+ I+K +T SL++IDELGRGTSTYDGFG+AWAI E+L
Sbjct: 411 GAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLIDELGRGTSTYDGFGIAWAISEYLAI 470
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGA 826
+I +FATHFHE+T L K++ GV N HV A D ++L + YK+ G+
Sbjct: 471 DIGCYCVFATHFHEITGLE---------KRVTGVINKHVEA--DIIDKQLVLKYKINNGS 519
Query: 827 CDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISD---- 882
DQS I+VAE+A+FP VV A+ KA EL+ P + KIE+ + + + D
Sbjct: 520 TDQSLAIYVAEWADFPHEVVESAKRKAKELDLDQPDS----KRKIELFTNKIPLLDDEIP 575
Query: 883 ---PNDMSRGAARAHQFLKEFSDMP 904
D+ G + QF+ ++ P
Sbjct: 576 QITSEDILNGKSIISQFIHDYKSTP 600
>gi|1000883|gb|AAB59571.1| Insertion mutation results in premature stop [Homo sapiens]
Length = 534
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 319/531 (60%), Gaps = 28/531 (5%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L+R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
L+ LE+++ S A DL L K +KLD QFG+ FR+T KEE
Sbjct: 480 ELREIMNDLEKKMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEE 530
>gi|440300090|gb|ELP92583.1| DNA mismatch repair protein MsH2, putative [Entamoeba invadens IP1]
Length = 629
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 325/551 (58%), Gaps = 25/551 (4%)
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALR-QD 366
T K SLF L+N+T TA GK+LL ++ PL + +IN RLD+VQ+FVD++ R +
Sbjct: 25 TSETKELSLFSLLNKTKTAN-GKKLLENYILHPLTNKTQINFRLDLVQSFVDNSPARLRI 83
Query: 367 LRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY 426
+ + L I DI R+ +EK L+ +V LY I L +G + I +
Sbjct: 84 MEEGLVLIPDITRITKTIEK--ITLENVVILYNVIQSTKKICEFLDDIKG---TQIGLQI 138
Query: 427 LDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
PL+ D L + LV T +DLD NG Y I +D L ++ + + +++ +
Sbjct: 139 TFPLKKCLAD--LVNYEELVNTLIDLDAAHNGVYRIRDDFDETLRDIREKLDEIDKLFTA 196
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
QTASDL + DK ++ + V R+ K E + K ++F VL++ K KFT
Sbjct: 197 AQLQTASDLGVKADKVKLVEYNS--NTVLRVAKGIEKTV--KADSRFKVLQSLKGECKFT 252
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
L++L + +++++ + V+ +++ V + F+ +++++S +DV+ SFA A
Sbjct: 253 FKTLQELNVKKAELVKKQDKVSQTFVDEIVKVVVGYKSSFEEISSVVSLIDVIQSFATTA 312
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNM 666
+ Y RP I D G+IIL +RHP E F+ ND + R S FQI+TGPNM
Sbjct: 313 VNSEESYVRPVITE-DAGNIILMKARHPLAETLSSSGFVENDVYINRETSRFQIVTGPNM 371
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GGKST++R +G+ ++MAQ+G +VPCD A +++ D + R+GAGD ++GVSTFM EM ++
Sbjct: 372 GGKSTYLRMIGMCVIMAQIGMYVPCDSAEVAICDNVMCRIGAGDDIVQGVSTFMAEMKDS 431
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
A IL+ AT ++L++IDELGRGTST+DGFG+AW I E+L+ EI +FATHFHE+TAL
Sbjct: 432 AQILRKATSKTLVLIDELGRGTSTFDGFGIAWGISEYLINEIGCFCVFATHFHEVTALEK 491
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
NA GV N HV A I +R+L + YKV G+ DQS ++VAE+A+FP+ VV
Sbjct: 492 RNA---------GVKNVHVVASI--VNRQLVLKYKVNDGSTDQSLAVYVAEWADFPKEVV 540
Query: 847 TLAREKAAELE 857
A++KA +LE
Sbjct: 541 DEAKKKAHDLE 551
>gi|183234999|ref|XP_001914132.1| DNA mismatch repair protein Msh2 [Entamoeba histolytica HM-1:IMSS]
gi|169800793|gb|EDS89090.1| DNA mismatch repair protein Msh2, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705398|gb|EMD45450.1| DNA mismatch repair protein MSH2, putative [Entamoeba histolytica
KU27]
Length = 630
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 213/625 (34%), Positives = 358/625 (57%), Gaps = 39/625 (6%)
Query: 288 DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
D+ M ++ A+ L++ K K +LF +NRT T +G++++ W+KQPL+D ++I
Sbjct: 7 DNAMIIEEDAIEGLHLFGDK----KEMTLFKHLNRTHTK-IGEKMIKEWIKQPLIDKDKI 61
Query: 348 NARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPY 406
N RL++V+ F D++ +R ++ + L I D+E+L+ + K + L+ IVKLY++
Sbjct: 62 NKRLELVEGFYDNSGIRLKIKNEELAIIPDLEKLIKGINK--SDLESIVKLYEAVRISKN 119
Query: 407 IRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSY 466
I+ L++ + I++ ++PLE +T++ + KF +V T +D+++ +N + I +
Sbjct: 120 IKEELKEMNNKS---IEKEIIEPLEKITEE--MEKFEEMVVTLIDIEETQNHVFKIREDF 174
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
D GL ++ + +E +Q A+DL++ DK ++ + R++K E
Sbjct: 175 DEGLQKIRESHKKVEELFEKCLEQAANDLNIKTDKIKIVEHNNNL--ILRVSKSNEK--E 230
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K ++ +++T K KFT +++ L + K+ + + K+ + + + + E F
Sbjct: 231 VKKNKKYTIIQTLKGECKFTFKEMQTLNVKRDKLKLKEEEINKKFIEEINKVVEGYKEKF 290
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIP 646
+ L M+ +D + SFA ++ Y++P I + G I + +RHP +E +FI
Sbjct: 291 QELENMIGYIDCIQSFATVSIDNNQGYSKPTIYESEKGIIKIIKARHPLIENNSINSFIE 350
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND + R ++ FQIITGPNMGGKST++R +G+ ++MAQ+G F+PC A IS+ D I R+
Sbjct: 351 NDIDIDRKETRFQIITGPNMGGKSTYLRMIGLCVIMAQIGMFIPCSEAHISICDKIMCRI 410
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GAGD + G+STFM EM +T+ I+K +T SL++IDELGRGTSTYDGFG+AWAI E+L
Sbjct: 411 GAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLIDELGRGTSTYDGFGIAWAISEYLAI 470
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGA 826
+I +FATHFHE+T L K++ GV N HV A D ++L + YK+ G+
Sbjct: 471 DIGCYCVFATHFHEITGLE---------KRVTGVINKHVEA--DIIDKQLVLKYKINNGS 519
Query: 827 CDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISD---- 882
DQS I+VAE+A+FP VV A+ KA EL+ P + KIE+ + + + D
Sbjct: 520 TDQSLAIYVAEWADFPHEVVESAKRKAKELDLDQPDS----KRKIELFTNKIPLLDDEIP 575
Query: 883 ---PNDMSRGAARAHQFLKEFSDMP 904
D+ G + QF+ ++ P
Sbjct: 576 QITSEDILNGKSIISQFIHDYKSTP 600
>gi|84999170|ref|XP_954306.1| DNA mismatch repair protein msh2 [Theileria annulata]
gi|65305304|emb|CAI73629.1| DNA mismatch repair protein msh2, putative [Theileria annulata]
Length = 651
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 349/621 (56%), Gaps = 35/621 (5%)
Query: 260 ALGALLSYAELLS-DESNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKT-DANKNFSL 316
A+ A A+ ++ + NY +++ + Y++D+Y+ LD AA +L++L T N SL
Sbjct: 18 AMKAFCLTADFINYKDRNYKSHFTLSIYTMDNYLCLDRAAFTSLSILPFNTHQQNVKMSL 77
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAF------VDDTALR--QDLR 368
+ L+N+ C +G +LL MW+ QPL+ V +I R D V+AF + LR Q+L
Sbjct: 78 YDLLNK-CRTSIGSQLLKMWITQPLVSVVDIKKRQDCVEAFKSMYRTIQSECLRKVQNLD 136
Query: 369 QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS-ALQQYEGQFSSLIKERYL 427
Q L + + + + ++ + +V LY I + ++Y+G S I+E +
Sbjct: 137 QILTKFKNFDMGIEAKSTKQPSFEDLVVLYDCIISANRLNQFTFKRYDGIHSHTIRELFA 196
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
+PL ++ ++ LVE +VDL + EN Y+ + ++D L + ++ + + I
Sbjct: 197 EPLSKISSK--FESYLRLVEKTVDLKEAENRVYVFNRNFDESLKKISSKLDQIRYDIEGQ 254
Query: 488 HKQTASDLDLPVDKA--LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR--KDGV 543
+ ++L K +K+ + G +FRI KK++P + K + + R K+
Sbjct: 255 RQTIQNELPYSGKKGNQVKIVECNTLGFLFRIPKKDQPSLLKAQIPGVNIEKVRLNKNEF 314
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
FT KL++ Y+ L +Y+ Q +V R + A T+ + + +++ LDVL +FA
Sbjct: 315 LFTTPKLRRQCTLYKSTLAQYEESQDLMVKRTFKVACTYWSLLERFIKIIATLDVLTAFA 374
Query: 604 DLASSCPTPYTRPDINPPDVGDII-LEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQII 661
++A+ Y RP I+ + G + L +RHP VE N FIPND + R +S I
Sbjct: 375 EVATL--FNYVRPTID--ETGKTVNLVDARHPLVEYVLTSNSFIPNDLYMERDRSRVHIT 430
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNMGGKST+I+QVG+ +M Q+GSFVPC +A + + I R+GA D QLRGVSTF+
Sbjct: 431 TGPNMGGKSTYIKQVGLIAIMNQIGSFVPCKKAKLPIFKHILCRIGASDIQLRGVSTFLA 490
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EM+E+A+IL+ A + SL+IIDELGRGTST+DGFGL+WAI L+E + L ATHFHE+
Sbjct: 491 EMVESAAILRMANEHSLVIIDELGRGTSTHDGFGLSWAIVVDLIERAKCFCLCATHFHEM 550
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
+LA E+ GV N H++A ++ +T LYKV+ G C +SFGI+VA A F
Sbjct: 551 GSLALEH---------FGVVNKHLTAQFYDSNNSMTFLYKVKDGVCKKSFGINVAIIAKF 601
Query: 842 PESVVTLAREKAAELE-DFTP 861
P V+ AR K ELE ++P
Sbjct: 602 PPDVIESARNKLKELEHKYSP 622
>gi|167385347|ref|XP_001737309.1| DNA mismatch repair protein MsH2 [Entamoeba dispar SAW760]
gi|165899926|gb|EDR26406.1| DNA mismatch repair protein MsH2, putative [Entamoeba dispar
SAW760]
Length = 630
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/623 (33%), Positives = 365/623 (58%), Gaps = 39/623 (6%)
Query: 286 SLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVN 345
++D+ M ++ A+ L++ K K +LF +NRT T +G++++ W++QPL+D +
Sbjct: 5 TIDNGMIIEEEAIEGLHLFGDK----KEMTLFKHLNRTHTK-IGEKMIKEWIRQPLIDKD 59
Query: 346 EINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+IN RL++V+ F +++ +R ++ + L + D+E+L+ + K + L+ IVKLY++ +R+
Sbjct: 60 KINKRLELVEGFYENSEIRLKIKNEELAIMPDLEKLIKGINK--SDLESIVKLYEA-VRI 116
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
+S ++ + + I++ ++PLE ++++ + KF +V T +D+++ +N + I
Sbjct: 117 S--KSIKEELKEMNNKEIEKEIIEPLERISEE--MEKFEEMVVTLIDIEETKNHVFKIRE 172
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
+D GL ++ + +E +Q A+DL++ DK ++ + R++K E
Sbjct: 173 DFDEGLQKIRENHKKVEELFEKCLEQAANDLNIKTDKIKIIEHNNNL--ILRVSKSNEK- 229
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
K ++ +++T K KFT +++ L + K+ + + K+ + + + + E
Sbjct: 230 -EVKKNKKYTIIQTLKGECKFTFKEMQTLNVKRDKLNLKEEEINKKFIEEINKVIEGYKE 288
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF 644
FK L ++ +D + SFA +++ Y +P I + G I ++ +RHP +E F
Sbjct: 289 TFKELENIIGYIDCIQSFATVSNDNNQGYAKPRIYESEKGIIKIKKARHPLIENNSINTF 348
Query: 645 IPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFA 704
I ND + R ++ FQIITGPNMGGKST++R +G+ ++MAQ+G F+PC A IS+ D I
Sbjct: 349 IENDIDINRKETRFQIITGPNMGGKSTYLRMIGLCVIMAQIGMFIPCSEADISICDKIMC 408
Query: 705 RVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL 764
R+GAGD + G+STFM EM +T+ I+K +T SL++IDELGRGTSTYDGFG+AW I E+L
Sbjct: 409 RIGAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLIDELGRGTSTYDGFGIAWGISEYL 468
Query: 765 VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEP 824
+I +FATHFHE+T L K++ GV N HV A D ++L + YK++
Sbjct: 469 AIDIGCYCVFATHFHEITGLE---------KRVNGVINKHVEA--DIIDKQLVLKYKIKN 517
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISD-- 882
G+ DQS I+VAE+A+FP VV A+ KA EL+ P + KIE+ + + + +
Sbjct: 518 GSTDQSLAIYVAEWADFPHEVVESAKRKAKELDLDQPDS----KKKIEIFTNKIPLLNDE 573
Query: 883 -----PNDMSRGAARAHQFLKEF 900
P+D+ +G + + F+ E+
Sbjct: 574 IPQITPDDIVKGKSIINNFIHEY 596
>gi|342184662|emb|CCC94144.1| putative DNA mismatch repair protein [Trypanosoma congolense
IL3000]
Length = 607
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 324/561 (57%), Gaps = 50/561 (8%)
Query: 328 MGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHLKRISDIERLMHNLEK 386
MG RL+ WL QPL + EIN RL +V+ V++ LR L Q L+R SD+++L L++
Sbjct: 1 MGSRLMRQWLLQPLQNTEEINQRLSLVEIMVENPILRDSLISQVLRRCSDMDKLNRKLQR 60
Query: 387 RRAGLQ--QIVKLYQSSIRLPYIRSALQQYEG-QFSSLIKERYLDPLESLTDDDHLNKFI 443
R L+ Q V L+ +++ P L++Y G + + L+ E ++ PLE + + H
Sbjct: 61 RTVALKDLQSVLLFANTV--PQAVEVLRKYHGGRDNKLLLEEFVAPLEDIAE--HFVNLR 116
Query: 444 ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKAL 503
L+ +V+L N I+ +D L AL+ +++S+ + I H++ +K +
Sbjct: 117 TLIGATVNLSDENNAR--INPEFDDDLHALEQQRQSVIKSIEREHQRVLKQFRW-TEKQM 173
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
K + T G+VFR+++K++ ++R +FI L T KDGV+F + +L L +QY+ + ++
Sbjct: 174 KCEYHTLHGYVFRVSRKDDAQVRAD--KEFITLGTTKDGVRFVSGQLSSLSEQYRGISKD 231
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
Y+ Q+ L ++I T T+ + +++ LDV +++A + P RP + P +
Sbjct: 232 YEERQQALKQKLIDTVATYLPVLDDAKELIAALDVFVAWALVVKDSSRPMVRPTVRTP-L 290
Query: 624 GDIILE-------------------------GSRHPCVEAQDWVNFIPNDCKLIRGKSWF 658
+ L+ +RHP VE + FIPN L +
Sbjct: 291 NEASLQECNNNNNNNNGSNNDSNNNNIVTIVNARHPLVELRQPA-FIPNTVHLTNDANAL 349
Query: 659 QIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVST 718
IITGPNMGGKSTF+R +G+ +++AQ G FVP + A I VRD + RVGA D +GVST
Sbjct: 350 -IITGPNMGGKSTFMRSIGICVVLAQAGCFVPAESADIVVRDAVMCRVGATDHLAQGVST 408
Query: 719 FMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHF 778
FM EMLE+A++L AT ++L I+DELGRGTSTYDGFGLAWAI + + ++ + LF+THF
Sbjct: 409 FMVEMLESAAMLNSATRQTLAIVDELGRGTSTYDGFGLAWAIAQEVAVKLNSTLLFSTHF 468
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HE+T LA ++AN V N+H AH D T+ L Y+++PG C +S+G++VA+
Sbjct: 469 HEMTQLAEKHAN---------VKNFHFGAHEDVTTGTLRFSYQLQPGPCGRSYGLYVAQL 519
Query: 839 ANFPESVVTLAREKAAELEDF 859
AN P+ V+ AREKA+ELEDF
Sbjct: 520 ANIPDDVLGAAREKASELEDF 540
>gi|300175778|emb|CBK21321.2| unnamed protein product [Blastocystis hominis]
Length = 591
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 225/602 (37%), Positives = 332/602 (55%), Gaps = 67/602 (11%)
Query: 291 MRLDSAAMRALNV--LESKTDANKNF--------SLFGLMNRTCTAGMGKRLLHMWLKQP 340
MRLDS+A+ LN+ ++ D+ F SLFGL+N T TAGMG+RLL WL QP
Sbjct: 1 MRLDSSALSTLNIFPVDKTRDSTSRFPRCFAFTRSLFGLLNHTLTAGMGERLLRRWLCQP 60
Query: 341 LLDVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKR-RAGLQQIVKLY 398
L+ ++ IN RLD+V+ F+ D +LR +LR LK + DIE+L LE+R R LQ + L
Sbjct: 61 LISIDRINTRLDLVELFLHDVSLRNELRTGCLKGLVDIEKLAQRLERRVRFRLQDLYVLS 120
Query: 399 QSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE-- 456
Q +L I + ++ E + ++ ++DP+ L F L + +D D L
Sbjct: 121 QGVSKLNRILNTMENSEHASNPTLQSVFIDPIRDLIQS--FEPFRELCDHVIDPDALAMT 178
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLH---KQTASDLDLPVDKALKLDKGTQFGH 513
E+++ +YD L ++ + L +I ++ ++ S +D+ K ++ +FG
Sbjct: 179 PPEFLVRPTYDATLESVAQRKNQLFAEITAVFDSVREQYSTMDV------KCERNARFGF 232
Query: 514 VFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT-------------NTKLKKLGDQYQKV 560
FR++ + ++ VL+ K+G+ FT + + L +++
Sbjct: 233 CFRVSSRFHNEVES--IPDVSVLQVLKNGIYFTLDGSTFPLGRFVMYSDFRGLSSDFEEC 290
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
EY Q+ LV +I A T+ F A++ ++LDVLLSFA+ +S PYTRP P
Sbjct: 291 RAEYAKAQERLVASIIDVARTYVPRFHVFASLAAQLDVLLSFAEASSIASIPYTRPQFLP 350
Query: 621 --PDVG-------DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQ---IITGPNMGG 668
P VG DI +E RH +E Q + FIPND L + Q IITGPNMGG
Sbjct: 351 STPIVGFGIAGPIDIRIEEGRHAILEVQTGLQFIPNDLDLTPRNNIPQNVCIITGPNMGG 410
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQ+G+ ++MAQ+G FVP A ++ RVGA D Q RGVSTFM EM++ ++
Sbjct: 411 KSTYMRQLGLIVMMAQIGCFVPAKTAVFPAFSALYTRVGASDNQSRGVSTFMSEMIDMSN 470
Query: 729 ILKGATD---RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI-RAPTLFATHFHELTAL 784
IL G ++ +SLI+IDELGRGTSTYDG GL+W I E ++ +I LF THF+ELTA+
Sbjct: 471 ILSGCSEDKGKSLILIDELGRGTSTYDGLGLSWGILEFILRKIPNCFCLFTTHFYELTAI 530
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
A KQ V N HV+A + +TM+Y V G D+SFGI+VA+ NFP+
Sbjct: 531 A---------KQFPAVKNVHVTAL--NGENYITMMYGVREGPSDKSFGINVAQLCNFPKE 579
Query: 845 VV 846
V+
Sbjct: 580 VI 581
>gi|156083094|ref|XP_001609031.1| DNA mismatch repair enzyme [Babesia bovis T2Bo]
gi|154796281|gb|EDO05463.1| DNA mismatch repair enzyme, putative [Babesia bovis]
Length = 791
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 237/740 (32%), Positives = 398/740 (53%), Gaps = 59/740 (7%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
+G+ ++ L + E D+ FT +ES L+ + C++ T S + K ++ L+
Sbjct: 36 LGVAICNVLDSNLNIVEINDNEFFTVLESILLQVAPTVCIMSTTK-DSIDIKRIKHILSL 94
Query: 215 CGV-MLTERKKTEFKTRDLVQDLDRLVRGSVE-------PVRDLVSGFEIAPGALGALLS 266
C + L + + V+++ ++G++E +R+ S F +P + ALL
Sbjct: 95 CNIDCLKHITTSITDSITTVEEMR--IKGNLEFLLGQEDHLRNY-SKFFASPLGMRALLD 151
Query: 267 YA---ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD---ANKNFSLFGLM 320
ELL + ++ + Y L++Y+ +D AA +L++L S ++ + SLFGL+
Sbjct: 152 IFDTFELLKQPTCKQSFRLGYYKLNNYLSMDRAAFASLSILPSTSNYFNESTGTSLFGLL 211
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERL 380
N+ C +G R L MW+ QPL D +EI+ R D V+AF+ A + + L+++ D++ +
Sbjct: 212 NK-CRTAIGARRLRMWVSQPLTDADEISKRHDCVEAFMGG-AYKTMQAECLRKVPDLDSI 269
Query: 381 MHNL------------EKRRAGLQQIVKLYQSSIRLP-YIRSALQQYEGQFSSLIKERYL 427
+ +K + +V LY+ I + ++ L Y G + +K +
Sbjct: 270 IMKFKSLEGVSELSSTQKNVMTFEDVVHLYECVIAVNRMVQFLLIPYNGIHADTVKLMFS 329
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
PL ++ F+ LVE +VDL + E Y+I+ ++D LS + N+ +++ ++ L
Sbjct: 330 GPLFKISS--LFEPFLRLVEKTVDLKEAEKRNYVINRNFDKNLSLMGNKLDTIRDEMEHL 387
Query: 488 HKQTASDLDLPVDKA-----LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR--K 540
+ ++ + K LKL + G +FR++KK+ +++ V + R K
Sbjct: 388 RESIEDEIYYGLKKTKKGGNLKLIECNHMGFLFRVSKKDHALLQECEGISKYVEKVRLNK 447
Query: 541 DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLL 600
FT +KL+ L ++ +EY+ Q L+ + ++ A T+ + + +++ LD+L+
Sbjct: 448 TEFLFTTSKLRHLCAKFANAQKEYEIAQSRLMKKALKVAATYWPLVERFTNIIATLDILV 507
Query: 601 SFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN---FIPNDCKLIRGKSW 657
+FA+ A++ Y RP+I+ + +I L +RHP VE +N F+PN + R S
Sbjct: 508 AFAEAAAT--LQYVRPEIDLEN-KEISLVNARHPLVEC--GINTRLFVPNSLYMTRETSL 562
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
I TGPNMGGKST+IRQVG+ ++M Q+GSFVPC A I + + RVGA D QLRGVS
Sbjct: 563 VHITTGPNMGGKSTYIRQVGIIVVMNQIGSFVPCTSAKIPIFKHVLCRVGASDIQLRGVS 622
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TF+ EM+E A+ILK A + SL+IIDELGRGTSTYDGF LAWAI L+ + L ATH
Sbjct: 623 TFLAEMIEAAAILKTANEHSLVIIDELGRGTSTYDGFALAWAIIVDLLNNAKCFCLCATH 682
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
FHE+ L + V N +V+A ++K+ +LY+++ G C +S+ I+VA+
Sbjct: 683 FHEMGELKDDYP---------CVENKYVAAKYFEETKKMVLLYEIKDGVCKESYAINVAD 733
Query: 838 FANFPESVVTLAREKAAELE 857
A FP+ V+ A+ K AELE
Sbjct: 734 IALFPQEVIANAQVKLAELE 753
>gi|66361202|ref|XP_627287.1| MutS like ABC ATpase involved in DNA repair [Cryptosporidium parvum
Iowa II]
gi|46228852|gb|EAK89722.1| MutS like ABC ATpase involved in DNA repair [Cryptosporidium parvum
Iowa II]
Length = 848
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 257/781 (32%), Positives = 410/781 (52%), Gaps = 110/781 (14%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKS--SEC---KTLR 209
+G+ D+ ++ +A D+ + +ES LV P+ V S +C K LR
Sbjct: 29 LGISLFDVNSGLISVANIEDNEQLSELESLLVRTQ------PSNVVYSVQKDCLSLKRLR 82
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDLDRLV-----RGSVEPVRDLVSGFEIAPGALGAL 264
+ L E + EF V+D + ++ R ++L S E+ +L L
Sbjct: 83 NLLDMNNNWTCE--EIEFPKSSTVEDFEVIISPLLRRSCSSYGKELES--ELIRHSLLNL 138
Query: 265 LSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANK-NFSLFGLMNRT 323
+ + +L+ + N I+ ++MR+DSA +++L + SK +++K + +LFGL+N+T
Sbjct: 139 IRHFQLVQSKENNSQCEIKFLVTKTFMRMDSACVQSLRIFPSKGESSKASTNLFGLLNKT 198
Query: 324 CTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIER--- 379
T +G R L WL+QPL+D +I +R D+V+ F + LRQ L H++++ D+++
Sbjct: 199 RTK-VGARRLEQWLRQPLIDEKQIISRQDVVEFFCKNDFLRQKLYGIHMRKVCDLDQIAV 257
Query: 380 -------LMHNLEKR-----RAGLQQIVKLYQSSIR----LPYIRSALQQYEGQFSS--L 421
LM + + + GL+ +VKLY S ++ I+ AL++ + SS
Sbjct: 258 RFRTFASLMASESSKSEREPKFGLEDMVKLYDSVMQSGNIFSDIKDALEENKNSDSSPSF 317
Query: 422 IKERY---LDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQE 478
++ Y L PLES + +I LVE ++DL++ + G Y+I + L L E+
Sbjct: 318 VQSVYDLILVPLESTLN--RFKDYIRLVEKTIDLEEADKGNYLIIPYFTPELEKLSEEKN 375
Query: 479 SLERQIHSLHKQTASDLDLPVDKALKLDKGTQ------------FGHVFRITKKEEPKIR 526
++R+I + K DLD + + ++G++ FR+T+++ +
Sbjct: 376 RIQRKIEAHRK----DLDAYLCRERGYNEGSREAVRVIRGEGADTSLCFRVTRRDIEYFQ 431
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K +F + K+ F +L L D+ +KV++EY N Q++++ + + A T+ +
Sbjct: 432 DK--KRFKQVRINKNDYIFRTNELMDLSDREEKVIKEYNNEQEQVLVKALSVASTYWSLV 489
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDI-----NPPDVGDIILEGS---------- 631
LA +L +DVLLSF+ + P+ RP + N I +GS
Sbjct: 490 SRLAGILGSIDVLLSFSMTSLCAQIPFVRPKMVNGKCNLATEMKISEDGSTNCNCRFYCK 549
Query: 632 --RHPCVEAQDWVN----FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
RHP +EAQ V+ F+ ND +L R + IITGPNMGGKST+IRQ+ + L+AQ+
Sbjct: 550 ELRHPLIEAQGTVSTTGQFVANDVELHRHGNLLSIITGPNMGGKSTYIRQIAICSLLAQI 609
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVP A I + D + RVGA D Q+ G+STF EM+E ++IL+ AT+R+L+I+DELG
Sbjct: 610 GCFVPAQEAQIPIMDQLMCRVGASDAQILGISTFFAEMIEASAILRSATERTLVIVDELG 669
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTST+DGFGLAW+I +LV E + TLFATHFHEL++LA N V N V
Sbjct: 670 RGTSTFDGFGLAWSIASYLVSEKKCYTLFATHFHELSSLASSTPN---------VTNLRV 720
Query: 806 SAHIDSTSRKLTM----------LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+A STS+ L++ LYKVE G D+S G+ VAE + P V +REKA E
Sbjct: 721 TA---STSKALSLSKQGSGVLKFLYKVEKGFTDKSLGVDVAELSGLPSETVKRSREKAEE 777
Query: 856 L 856
L
Sbjct: 778 L 778
>gi|209881111|ref|XP_002141994.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
gi|209557600|gb|EEA07645.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
Length = 845
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 264/852 (30%), Positives = 427/852 (50%), Gaps = 102/852 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSE-----C 205
+G GL + + + E D+ F+ +ES LV P V S +
Sbjct: 24 SGPVAGLSFFNNRSGTFSVCEISDNDQFSEIESLLVRNK------PNMLVYSIQNDQLGL 77
Query: 206 KTLRDALTRCGVMLTERKKTEFKTRDLVQD-LDRLVRGSVEPVRDLVSGFEIAPGALGAL 264
+T ++ + TE +++ T D + D L L+R S R + +I +L L
Sbjct: 78 RTFKNIIEMQNST-TEEIRSKTCTMDSIIDILSPLLRRSHRSYRKELES-DIIRESLYNL 135
Query: 265 LSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANK-NFSLFGLMNRT 323
++Y L N G I+ +D YMR+DSA + +L + K ++++ + SL+GL+N+T
Sbjct: 136 INYFRLNQSSENDGKCEIKFLLVDGYMRMDSACIHSLKIFPVKGESSRVSTSLYGLLNKT 195
Query: 324 CTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMH 382
TA +G R L WL+QPL D+ I+ R DIV+ F ++ LRQ + +L+++ D++++
Sbjct: 196 RTA-IGSRKLESWLRQPLTDLEIISKRQDIVEFFSENDILRQKIYGVYLRKVCDLDKISS 254
Query: 383 NLEK-----------------------RRAGLQQIVKLY----QSSIRLPYIRSALQQYE 415
+ + L+ +VK+Y QS++ I ++ +
Sbjct: 255 KFRRVASINFEDIKSLKQSYRNSENLLLKCTLEDVVKVYDSISQSTLMFKDITESISEMG 314
Query: 416 GQFSSLIKERYLDPLESLTD---DDHLNKF---IALVETSVDLDQLENGEYMISSSYDTG 469
S + ++ +D + SL ++ L+KF I LVE +VDLD+ NG Y + S +
Sbjct: 315 A--SETLSKKIIDSIYSLILFPLEEILSKFKGYIQLVECTVDLDEANNGNYFVVSHFTPE 372
Query: 470 LSALKNEQESLERQIHSLHKQTAS---------DLDLPVDKALKLDKGTQFGHVFRITKK 520
L AL E+E +++ I S K+ + D + L++GT FR+T+K
Sbjct: 373 LEALSKEKERIKKNIESHRKEIEDFLYEERGQVNFDSNREAVRVLNEGTDNMLCFRVTRK 432
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ + K +F + K+ F +L KL ++ + + Y Q ++ + I A
Sbjct: 433 DIEFFQDK---RFKKVRINKNDYIFRTQELCKLSEEQDEAISRYNKAQTLVLTKTISVAS 489
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD----------IILEG 630
T+ + + L+ +L +DVLLSF + P + RP I + + +I +
Sbjct: 490 TYWSLIEKLSNILGTIDVLLSFTLTSLCAPKRFVRPKITDGNCNNKEEPHKCGCRLICKN 549
Query: 631 SRHPCVEAQD--WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
RHP VEAQ F+ N+ + R + +ITGPNMGGKST+IRQ+ + L++Q+G F
Sbjct: 550 LRHPLVEAQGNLGTTFVANNVDMHRHGNLLTVITGPNMGGKSTYIRQIAICTLLSQIGCF 609
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VP + A + + + R+GA D QL G+STF EM+E A+IL+ AT ++L+I+DELGRGT
Sbjct: 610 VPAEEAQLPIMHQLMCRIGASDAQLLGISTFFAEMIEAAAILRSATPQTLVIVDELGRGT 669
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSA- 807
STYDGFGLAW+I LV+E ++ TLFATHFHEL+ L EF M V N V+A
Sbjct: 670 STYDGFGLAWSIASCLVKEKQSYTLFATHFHELSIL------EF---AMENVTNLKVTAA 720
Query: 808 ----HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
++ LT YKVE G+ D+S G+ VAE + PE + AR+KA+ELED
Sbjct: 721 TKKRALEKNENILTFFYKVEKGSADESLGVDVAELSGLPEVTIKRARQKASELEDI--ER 778
Query: 864 VISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD---MPLETMDLKEALERVKRM 920
+ D + ++ KRI D+S ++ + L++ D + M+ KE + +
Sbjct: 779 IYMDTS----ATREKRIRTLTDIS---SKLYSGLRKILDSFIISSTPMEFKENVSGLWEN 831
Query: 921 KDDLEKDAGDCC 932
DL K C
Sbjct: 832 LRDLSKGTAGIC 843
>gi|67623531|ref|XP_668048.1| MutS 2-related [Cryptosporidium hominis TU502]
gi|54659240|gb|EAL37827.1| MutS 2-related [Cryptosporidium hominis]
Length = 847
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 252/771 (32%), Positives = 404/771 (52%), Gaps = 90/771 (11%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKS--SEC---KTLR 209
+G+ D+ ++ +A D+ + +ES LV P+ V S +C K LR
Sbjct: 28 LGISLFDVNSGLISVANIEDNEQLSELESLLVRTQ------PSNVVYSVQKDCLSLKRLR 81
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDLDRLV-----RGSVEPVRDLVSGFEIAPGALGAL 264
+ L E + EF V+D + ++ R ++L S E+ +L L
Sbjct: 82 NVLDMNNNWTCE--EIEFPKSSTVEDFEVIISPLLRRPCSNYGKELES--ELIRQSLLNL 137
Query: 265 LSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANK-NFSLFGLMNRT 323
+ + +L+ + N I+ ++MR+DSA +++L + SK +++K + +LFGL+N+T
Sbjct: 138 IRHFQLVQSKENNSQCEIKFLVTKTFMRMDSACVQSLRIFPSKGESSKASTNLFGLLNKT 197
Query: 324 CTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMH 382
T +G R L WL+QPL+D +I +R D+V+ F + LRQ L H++++ D++++
Sbjct: 198 RTK-VGARRLEQWLRQPLIDEKQIISRQDVVEFFCKNDFLRQKLYGIHMRKVCDLDQIAV 256
Query: 383 NL-------------EKRRA--GLQQIVKLYQSSIR----LPYIRSALQQYEGQFSS--L 421
+R A GL+ +VKLY S ++ I+ AL++ + SS
Sbjct: 257 RFRTFASLMASESSKSEREAKFGLEDMVKLYDSVMQSGNIFSDIKDALEENKNSDSSPSF 316
Query: 422 IKERY---LDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQE 478
++ Y L PLES + +I LVE ++DL++ + G Y+I + L L E+
Sbjct: 317 VQSVYDLILVPLESTLN--RFKDYIRLVEKTIDLEEADKGNYLIIPYFTPELEKLSEEKN 374
Query: 479 SLERQIHSLHKQTASDLDLPVDKALKLDKGTQ------------FGHVFRITKKEEPKIR 526
++ +I + K DLD + + ++G++ FR+T+++ +
Sbjct: 375 RIQCKIEAHRK----DLDAYLCRERGYNEGSREAVRVIRGEGADTSLCFRVTRRDIEYFQ 430
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
K +F + K+ F +L L D+ ++V++EY N Q++++ + + A T+ +
Sbjct: 431 DK--KRFKQVRINKNDYIFRTNELMDLSDREERVIKEYNNEQEQVLVKALSVASTYWSLV 488
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRP-----DINPPDVGDIILEGS---------- 631
LA +L +DVLLSF+ + P+ RP + N I +GS
Sbjct: 489 SRLAGILGSIDVLLSFSMTSLCAQIPFVRPKMVNGECNLATEMKISEDGSTNCNCRFYCK 548
Query: 632 --RHPCVEAQDWVN----FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
RHP +EAQ V+ F+ ND +L R + IITGPNMGGKST+IRQ+ + L+AQ+
Sbjct: 549 ELRHPLIEAQGTVSTTGQFVANDVELHRHGNLLSIITGPNMGGKSTYIRQIAICSLLAQI 608
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G FVP A I + D + RVGA D Q+ G+STF EM+E ++IL+ AT+R+L+I+DELG
Sbjct: 609 GCFVPAQEAQIPIMDQLMCRVGASDAQILGISTFFAEMIEASAILRSATERTLVIVDELG 668
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGTST+DGFGLAW+I +LV E + TLFATHFHEL++LA N N + V + V
Sbjct: 669 RGTSTFDGFGLAWSIASYLVSEKKCYTLFATHFHELSSLASSTPNVTNLR--VTASTSKV 726
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ S L LYKVE G D+S G+ VAE + P V +REKA EL
Sbjct: 727 PSLSKQGSGVLKFLYKVEKGFTDKSLGVDVAELSGLPSETVKRSREKAEEL 777
>gi|349603513|gb|AEP99332.1| DNA mismatch repair protein Msh2-like protein, partial [Equus
caballus]
Length = 352
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/365 (50%), Positives = 242/365 (66%), Gaps = 13/365 (3%)
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
E+++ S+D LS L+ + LE+++ S A DL L K +KLD TQFG+ FR+T
Sbjct: 1 EFLVKPSFDPNLSQLREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVT 60
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
KEE +R F ++ +K+GVKFTN+KL L ++Y K EY+ Q +V ++
Sbjct: 61 CKEEKVLRNN--KNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNI 118
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ + E ++L +L++LD ++SFA +++ P PY RP I G I L SRH CVE
Sbjct: 119 SSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLRASRHACVEV 178
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
QD V FIPND + K F IITGPNMGGKST+IRQ GV +LMAQ+G FVPC+ A +++
Sbjct: 179 QDEVAFIPNDVHFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVTI 238
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
DCI ARVGAGD QL+GVSTFM EMLETASIL+ AT SLIIIDELGRGTSTYDGFGLAW
Sbjct: 239 VDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAW 298
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
AI E++ +I A +FATHFHELTALA+ Q+ V N HV+A +T LTM
Sbjct: 299 AISEYIATKIGAFCMFATHFHELTALAN---------QIPTVNNLHVTAL--TTEETLTM 347
Query: 819 LYKVE 823
LY+V+
Sbjct: 348 LYQVK 352
>gi|82793333|ref|XP_727998.1| DNA mismatch repair protein Msh2 [Plasmodium yoelii yoelii 17XNL]
gi|23484124|gb|EAA19563.1| DNA mismatch repair protein msh2 [Plasmodium yoelii yoelii]
Length = 593
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 320/556 (57%), Gaps = 39/556 (7%)
Query: 346 EINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAG-------------- 390
EIN RL+IV+ F+D+ +R + +LKRI ++++L H L++
Sbjct: 3 EINQRLNIVETFIDEDDIRNSVFCNYLKRIPELDKLNHYLKEINKNNDIRVNSKYNEEMI 62
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
L+ IVKLY + + I L G+ + E + PL + + +KF+ ++E ++
Sbjct: 63 LKDIVKLYYAILDFKQIYFLLVSINGKHKETLNEILIKPLHDILNK--FSKFLDMIEMTI 120
Query: 451 DLDQLE-NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL-----DLPVDKALK 504
DL ++E N Y+IS +D+ L + NE+ +L ++I + + DL D KA++
Sbjct: 121 DLKEIEENKVYLISKHFDSELEQIYNEKSALMKKIKNHKEDVEKDLFSDKHDRRNKKAMR 180
Query: 505 LD----KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKV 560
D + G +FR+ KK+ P ++++ +++ + K+ FT LK L +Y+
Sbjct: 181 EDIRLIECNTNGFLFRVCKKDCPLVQQQ-KKKYLPIRMNKNEFLFTTNTLKNLCREYEHC 239
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
L Y Q E+V + I T++ + + ++S LDVL+SF+ + + P Y RP +
Sbjct: 240 LSIYNTLQSEIVKKTICAVSTYTPVIEKFIDVVSTLDVLVSFSVVCYNSPFTYVRPAL-V 298
Query: 621 PDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
+ ++I++ SRHP +E Q + NFIPND + + KS I+TGPNMGGKST+IRQ+ +
Sbjct: 299 KNGENVIMKKSRHPLLELQHNISNFIPNDIHMNKNKSRLIIVTGPNMGGKSTYIRQIAII 358
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
++AQ+G FVPCD I + I RVGA D QL+G+STF+ EM+E ++I+K A + SLI
Sbjct: 359 CILAQIGMFVPCDFCEIPIFTQIMCRVGASDFQLKGISTFLSEMIEASAIIKNADNNSLI 418
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
I+DELGRGTSTY+G G++W+I +++++ I+ LFATHFHE++ +A+ Q G
Sbjct: 419 IVDELGRGTSTYEGLGISWSIGKYILDNIKCFCLFATHFHEMSNIAY---------QCEG 469
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
V N H+ ID ++K+ LY+++ GA ++S+G++VAE A P+ V+ A EK ELE
Sbjct: 470 VINRHIETIIDQKNKKICFLYEIKDGASNKSYGVNVAEIAKLPKDVIQKAYEKVEELESA 529
Query: 860 TPSAVISDDAKIEVGS 875
+ + I+ S
Sbjct: 530 ENKYYLKEKLNIDTSS 545
>gi|350644504|emb|CCD60770.1| hypothetical protein Smp_199070 [Schistosoma mansoni]
Length = 779
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/461 (42%), Positives = 278/461 (60%), Gaps = 18/461 (3%)
Query: 415 EGQFSSLIKERYL---------DPLESLTDDDHLNKFIA---LVETSVDLDQL-ENGEYM 461
+ +FS +IK + L +P SL + ++ FI LVE+++DLD + + E++
Sbjct: 231 KSEFSHIIKPQDLSYFLRFEKENPNGSLLYEKAMDSFILFKDLVESNIDLDYVNQRNEFI 290
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
+ + D L ++N+ ++LE +I ++ A L+L +K++KL+ G+ R+T K+
Sbjct: 291 VRADKDPLLQEIRNKLDNLEERIRDEFRRCAKILNLEQNKSIKLESNELHGYFMRVTLKD 350
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
E +R T F +L+T+K GV+F N ++ L + Y +V +EY Q+ +V++V+ A T
Sbjct: 351 EKCLRGLKT--FEILDTQKGGVRFRNKQMTSLTETYAEVKQEYNGLQEVVVHQVVCAAAT 408
Query: 582 FSEIFKSLATMLSELDVLLSFADLA-SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQD 640
+ E L + LDV++S A A SS Y RP I D G IIL+ +RHPC+E QD
Sbjct: 409 YLEPINQLNETTAFLDVIVSLAIAAISSSGVSYIRPKILSEDNGRIILKEARHPCLEMQD 468
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
V+ IPND L RGK F IITGPNMGGKST+I V V + MAQ+GSFVPC A I D
Sbjct: 469 RVSVIPNDIHLERGKQIFLIITGPNMGGKSTYIHSVAVIVAMAQIGSFVPCSYAEIMPVD 528
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
I ARVGA D Q RGVSTF+ EMLET+S+L+ T SL+IIDELGRGTSTYDGFGLAWA+
Sbjct: 529 AIMARVGAADYQCRGVSTFLAEMLETSSVLRSVTRNSLVIIDELGRGTSTYDGFGLAWAV 588
Query: 761 CEHLVE-EIRAPTLFATHFHELTALAHENANEF-NTKQMVGVANYHVSAHIDSTSRKLTM 818
L E+ LFATHFHELT+LA+ N + + V+N + K+TM
Sbjct: 589 ASFLASPEVGCFGLFATHFHELTSLAYYMPKRVANLRVLCNVSNDKEIVENKESETKVTM 648
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
LYKVE G C +S+G+ VA A P V+ A + ++ E+
Sbjct: 649 LYKVEAGVCSRSYGLDVARLAGLPIEVIKQAEHQTSKDEEL 689
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 21/241 (8%)
Query: 20 GFLSFYKTL-PNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV 78
GF SF+K+L P +R F+R + T H +A +A YY + +++ G +LS V
Sbjct: 10 GFYSFWKSLGPKPPTTLRCFERGEMMTLHDSDAILVATDYYKNLSLVKRFSRGKSSLSYV 69
Query: 79 SVSKNMFETIARDLLLERTDHTLELYE-----GSGSNWRLVKSGTPGNLGSYEDVLFANN 133
+V K + + R LL+R + +E+Y G + W L +PG+L S ED+L + +
Sbjct: 70 TVKKQNTDFL-RHFLLKR-QYRIEIYCSTTKCGRDNEWSLKLKASPGDLSSIEDLLTSTS 127
Query: 134 EMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKEC 193
E + + A+ + L + D + + EF+D H N+E+ALV L +EC
Sbjct: 128 ESVEACGLSAVNIKQLNEQIHVCLAFCDTESQKFLVGEFMDSVHLANLETALVQLKTREC 187
Query: 194 LLPT-----EAVKSSECKTLRDALT--------RCGVMLTERKKTEFKTRDLVQDLDRLV 240
L+PT + S+ L +A++ R GV+ TE KK+EF QDL +
Sbjct: 188 LVPTGLLSHPDISKSDVTLLDNAISEHVSLVFERTGVLPTEVKKSEFSHIIKPQDLSYFL 247
Query: 241 R 241
R
Sbjct: 248 R 248
>gi|337743315|gb|AEI73154.1| MSH2 [Kryptolebias marmoratus]
Length = 545
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 194/547 (35%), Positives = 315/547 (57%), Gaps = 14/547 (2%)
Query: 110 NWRLVKSGTPGNLGSYEDVLFANNEMQDT--PVIVALFPNFRENGCTIGLGYVDLTKRVL 167
+WR+ +PGNL +E++LF + V+ + +G+GYVD +R +
Sbjct: 5 DWRIDYKASPGNLTQFEEILFGGGTGAEVCAGVVAVRLATGADGQRVVGVGYVDAAQRKM 64
Query: 168 GLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEF 227
G+ EF D F+N+ES LV +G KECLL + ++ LR+ + R G+++++RKK EF
Sbjct: 65 GVCEFPDSEIFSNLESLLVQIGPKECLL-AQGESGADGNKLREVVQRGGMLVSDRKKAEF 123
Query: 228 KTRDLVQDLDRLV---RGSVEPVRDLVS-GFEIAPGALGALLSYAELLSDESNYGNYYIR 283
++D+VQDL+RL+ RG L ++A L A++ + ELLSDESN+ ++ +
Sbjct: 124 NSKDIVQDLNRLLLSKRGETAASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLT 183
Query: 284 KYSLDSYMRLDSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
L YMRLD AA+RALN+ + S D + SL GL+N+ C G+RL++ W+KQPL+
Sbjct: 184 TLQLGQYMRLDHAAVRALNLFQGSPDDTSGAHSLAGLLNK-CRTPQGQRLVNQWIKQPLM 242
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
D +I RLD+V FV D+ LRQ ++ L+R D+ RL + A LQ +++Q+
Sbjct: 243 DKTKIEERLDLVDGFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHTATLQDCYRVHQAV 302
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
+LP + +AL +Y G + L++ + PL L D K+ ++ET++D++Q+E+ E++
Sbjct: 303 SQLPGLVAALDRYSGSYQVLLQAVFTSPLRDLQTD--FTKYQEMIETTLDMNQIEHHEFL 360
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
+ +S+D LS L+ + ++LE+ + + A +L L K +KL+ G R+T KE
Sbjct: 361 VKASFDPVLSELREKMDALEKSMQAALSSAARELGLEAGKTVKLESNAVLGFYLRVTCKE 420
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
E +R +F L+ +K+GV+FTN+KL L ++Y K EEY+ Q +V +I A
Sbjct: 421 EKSLRN--NKKFTTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIINIASG 478
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ + ++L ++++LD + SFA A S P PY RP I + L +RHPC+E
Sbjct: 479 YVDPLQALNDVVAQLDAVASFAVAAVSAPVPYVRPRILDGGCRRLELLQARHPCMETDAD 538
Query: 642 VNFIPND 648
FIPND
Sbjct: 539 TAFIPND 545
>gi|307105803|gb|EFN54051.1| hypothetical protein CHLNCDRAFT_36258 [Chlorella variabilis]
Length = 358
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/375 (49%), Positives = 240/375 (64%), Gaps = 27/375 (7%)
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
+KF N LK + Q++ +Y+ Q EL+ +V+ A +F +++ ++ L+ELD+L +F
Sbjct: 1 MKFVNKALKAAAQRLQQLSADYERRQAELLAQVVGVAASFVGVWRLVSATLAELDLLAAF 60
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
++A++ P Y RP + P + G+I L G RHPC+E Q+ V+FIPNDC + G+SWF IIT
Sbjct: 61 GEVAAAAPASYVRPTMLPSEEGEISLRGCRHPCLEVQEGVDFIPNDCLMRTGQSWFHIIT 120
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNMGGKSTFIRQVG+ +LMAQ+GSFVP D A ISVRD IFARVGAGDCQ RG+STFM E
Sbjct: 121 GPNMGGKSTFIRQVGLAVLMAQIGSFVPADSARISVRDAIFARVGAGDCQQRGLSTFMAE 180
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLETA+ILKGAT SL+IIDELGRGTST++G GLAWAI EHL ++ TLFATHFH+L
Sbjct: 181 MLETAAILKGATSSSLVIIDELGRGTSTWEGMGLAWAISEHLCTQVGCATLFATHFHDLA 240
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
AL + GVAN HV A + LTMLY+V GA QS+G+ VA FA P
Sbjct: 241 ALQ-------SALPGAGVANLHVKA--AESDSGLTMLYQVHEGASAQSYGLAVARFARLP 291
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSD 902
V+ A + AELE A A E G + + +A + L +F+
Sbjct: 292 PEVIEAAAARLAELEPAPAGA-----AATEQGGEEQ-------------QARELLAKFAQ 333
Query: 903 MPLETMDLKEALERV 917
+PLE E L V
Sbjct: 334 LPLEQGMQPEQLAAV 348
>gi|449018355|dbj|BAM81757.1| mutS family DNA mismatch repair protein MSH2 [Cyanidioschyzon
merolae strain 10D]
Length = 980
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 252/731 (34%), Positives = 378/731 (51%), Gaps = 63/731 (8%)
Query: 181 VESALVALGCKECLLPTEAVKSSECKTLRDALTRCG----VMLTERKK------------ 224
+E ALV G +E +L + E L AL R G ML ++
Sbjct: 257 IERALVRSGARELVLQDGDLAEYELHQLDAALERIGGIARAMLRPVRRGGLGAEHDLRWL 316
Query: 225 -TEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIR 283
E +T D Q D R + ++ S ++A + + +L G Y I
Sbjct: 317 VAESETPDSCQRDDDAWRPEALTLDEMFS-MKLATDCAHMCVRFLDLGQRVGERGRYRIE 375
Query: 284 KYSLDSYMRLDSAAMRALNVL------ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
+ + ++LD+AA++AL+VL + + SL+ L++R C MG RLL L
Sbjct: 376 QLAWRQNLQLDAAALKALHVLWGDETGPASPSSPPPGSLWCLLDR-CRTPMGSRLLRTAL 434
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLEKRRAGLQQIVK 396
+PL + I RLD+V+ V D RQ L HLK +D+ + L + + L+Q+V+
Sbjct: 435 IEPLGNREAIERRLDLVELLVHDVIARQRLADYHLKGFADLITIARRLARDKTSLRQLVR 494
Query: 397 LYQSSIRLPYIRSALQ-------QYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
LYQS +RLP +RS L+ + + +++ D L ++ +FI VE
Sbjct: 495 LYQSLVRLPALRSELEDLLLAHTETRPRCCQVLRSDIADRLAAVAPAA--QEFIEDVERF 552
Query: 450 VDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL--DLPVDKA----L 503
+DL+++ N EY++ S T ++ ++ E ++ +++ ++QT + L D V + L
Sbjct: 553 IDLERITNHEYLLRPSMSTEMTQIRGEMDTCLEEMNRTYQQTIAALQQDDGVRGSGGDWL 612
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
KL++ G FR+T+K+E IR K VLETRKDGV+FT + L++ Y +
Sbjct: 613 KLERKDGLGFCFRVTRKDEVCIRGK--ESITVLETRKDGVRFTTSALRRWSSAYTAAEQR 670
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD- 622
Y Q+ + +V ++ + + L +L+ LD+L++FA + S + RP + D
Sbjct: 671 YVAVQRSTLAQVFGHFAKYASMLEVLGHVLALLDMLVAFAMI--SAERQFCRPRLVESDE 728
Query: 623 -----VGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
+IL G RHP VE Q F+ ND L + +ITGPNMGGKS +R
Sbjct: 729 FEAHESSGVILRGLRHPLVELALQGEHTFVANDVVLTHPRR-LLLITGPNMGGKSVTLRS 787
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
VG+ +LMA G FV D AS+ V D I RVGAGD Q RG+STFM EML+ ++IL+ AT
Sbjct: 788 VGLAVLMAHCGCFVAADAASLPVVDRILVRVGAGDMQTRGISTFMAEMLDMSTILRHATS 847
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
SL+++DELGRGTST +GFGLA A+CE L + TLFATHFHELT LA +
Sbjct: 848 SSLVLVDELGRGTSTAEGFGLAAALCEALASRA-SWTLFATHFHELTKLAQGAWSHRMLN 906
Query: 796 QMVGVANYHV---SAHIDSTSR-----KLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
V VA H + I+ R L LY++ PG ++SFGIH+AE A FP V+
Sbjct: 907 AHVAVAQVHRDNDDSEINDRGRGTPAASLVFLYELRPGPSERSFGIHIAEMAGFPHPVID 966
Query: 848 LAREKAAELED 858
+AR K + LE+
Sbjct: 967 MARAKVSALEN 977
>gi|1000879|gb|AAB59570.1| The base insertion results in premature stop [Homo sapiens]
Length = 486
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/487 (37%), Positives = 294/487 (60%), Gaps = 28/487 (5%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L+R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+EN E+++ S+D LS
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS 479
Query: 472 ALKNEQE 478
LK E
Sbjct: 480 ELKRNNE 486
>gi|70950501|ref|XP_744569.1| DNA mismatch repair protein Msh2p [Plasmodium chabaudi chabaudi]
gi|56524575|emb|CAH75216.1| DNA mismatch repair protein Msh2p, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 313/576 (54%), Gaps = 78/576 (13%)
Query: 340 PLLDVNEINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLE------------- 385
P+ D +IN RLD+V+ DD ALR ++ +L++I D++ ++ L+
Sbjct: 1 PIRDEKKINQRLDMVEIMNDDQALRSMIQADYLRKICDLDLIIKKLKIANNIVKNSNMSD 60
Query: 386 -------------KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSL-----IKERYL 427
+ ++ +VKLY + + I AL +Y+ ++E ++
Sbjct: 61 NYGAIHNRSYGNSNNKCTIEDLVKLYDTVVASKNIYYALNEYKNNTHKKNNKKTLEEHFI 120
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
PLES+ L F+ L+E +VD DQ+ +++IS ++D L AL E+E + +QI L
Sbjct: 121 IPLESIIIS--LTSFLKLIELTVDFDQVIKNQFLISPNFDDNLMALSKEKEEIYKQI--L 176
Query: 488 HKQTASDLDLP---------------------VDKALKLDKGTQFGHVFRITKKEEPKI- 525
H + + D+ + + +KL +FR KK+ I
Sbjct: 177 HHRAEVEEDINYLKRGDSKSKNNKNYSSNNSGMKEDVKLIDCNTNVFLFRSVKKDIVFIQ 236
Query: 526 -RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
RKK Q + K+ + F KL++L QYQ VL Y Q++L N+ I+ A ++ E
Sbjct: 237 QRKKTYNQ---VRVNKNEILFNTNKLRELCKQYQYVLHSYNISQEQLANKAIEVASSYWE 293
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII-LEGSRHPCVEAQ--DW 641
F L+ ++S++D+ SFA + S C + Y RP + G I+ + SRHP VEA
Sbjct: 294 PFNKLSKIISQIDIFCSFAYVISQCLSTYVRPIVEQN--GKILEIRNSRHPLVEANYLQT 351
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
NFIPND + + + IITGPNMGGKST+IRQ+ + LMA G FVP A I +
Sbjct: 352 KNFIPNDIYMDKENNRLNIITGPNMGGKSTYIRQIAIISLMAH-GCFVPSTYAKIPIFSQ 410
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
I R+G+ D QL+G+STF EM+E ++I+K A +L+IIDELGRGTSTY+GFG++W++
Sbjct: 411 IMCRIGSSDIQLKGISTFFSEMIEVSAIIKNADSDTLVIIDELGRGTSTYEGFGISWSVA 470
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
+L+ I+ LFATHFHE++ L E A V+N HVSA ID +K++ LY+
Sbjct: 471 NYLLNNIKCLCLFATHFHEISNLEDEYA---------AVSNNHVSAKIDEVKKKISFLYE 521
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ G D+S+G+HVA+ A P+ V+ + EK+ ELE
Sbjct: 522 IKKGFADKSYGVHVAQIA-LPQKVIDKSFEKSKELE 556
>gi|297544629|ref|YP_003676931.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842404|gb|ADH60920.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 866
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 207/579 (35%), Positives = 320/579 (55%), Gaps = 38/579 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +SYM LDS A++ L +LES + +K SL G++++T T MG RLL WL++PLL+
Sbjct: 260 YEDNSYMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTP-MGGRLLKKWLEEPLLNK 318
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I+ARL V+ +D RQDL+Q L +I D+ERL + + + + + S L
Sbjct: 319 EHIDARLQAVEELFNDYKNRQDLKQLLNKIYDLERLSSKIVYQSINPKDFISIKLSLQNL 378
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
PYI+ LQ++ + I E++ D L L++ S+ D QL+ G +
Sbjct: 379 PYIKEILQRFSSRLLKDIYEKF----------DTLQDIYELIDKSIKDDPSTQLKEGN-I 427
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y+ + L+ + I +L + + K L++ FG+ +TK
Sbjct: 428 IKDGYNETVDKLRKASVEGKNWIANLEAEEREKTGI---KNLRIGYNKVFGYYIEVTKSN 484
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P++ +K +I +T + ++ +LK++ + E+ + +L N + +
Sbjct: 485 IPQVPEK----YIRKQTLANAERYVTPELKEIEEAILGAEEKLIELEYQLFNEIREKIEL 540
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ A ++ +DVL+SFA++A + YT+P ++ D I+++ RHP +E
Sbjct: 541 QIVRIQDTAKYIATIDVLISFAEVAET--NRYTKPIVDYSD--RIVIKEGRHPVIETISD 596
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
+F+ ND + I ++ IITGPNM GKST++RQV + +LMAQ+GSFVP A I + D
Sbjct: 597 ESFVANDIE-IGPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDK 655
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF RVGA D G STFM EM E A+ILK AT +SLII+DE+GRGTSTYDG +A A+
Sbjct: 656 IFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVI 715
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
E++ E+I+A TLFATH+HELT L +M GV NY+VS ++ + L K
Sbjct: 716 EYIHEKIKAKTLFATHYHELTKLEG---------KMKGVRNYNVS--VEEREDDIIFLRK 764
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
+ PG D+S+GI V++ A P S+V A+E LE+ T
Sbjct: 765 IVPGGADKSYGIQVSKLAGLPYSIVERAKEILKSLENDT 803
>gi|313238586|emb|CBY13632.1| unnamed protein product [Oikopleura dioica]
Length = 890
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 266/882 (30%), Positives = 431/882 (48%), Gaps = 78/882 (8%)
Query: 12 KLDAKQARGFLSFYKTLP-NDTRAVRFF--DRRDYYTAHGENATFIAKTYYHTTTALRQL 68
+L F F+ +LP +R F D ++T H ++ + + + ++
Sbjct: 8 QLKGVNGANFKEFWASLPEKQANCIRVFRMDSMGHFTVHDDDTRHMVEILQNENCIVKA- 66
Query: 69 GTGSDALSSVSVSKNMFET--IARDLLLERTDHTLELYEGS---GSNWRLVKSGTPGNLG 123
T ++ + N+ + + R+L+ + +E+YE + W V G+PGNL
Sbjct: 67 RTEANTTNMPWAMINLIQVRRLLRELVFIQ-GFRVEIYEPAEHDSEEWE-VNYGSPGNLS 124
Query: 124 SYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVES 183
E ++F + P + + G L V+ R + +A F DD T++ES
Sbjct: 125 CVEHLVFDPSGDSYVPCTKIMGLKLLK-GDRFSLAIVNAEDREVHVATFGDDPRLTDLES 183
Query: 184 ALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGS 243
+ +E L V ++ K R A RC VM+T+ K+ F+ +GS
Sbjct: 184 VFIQSQVREVL-----VTATNDKLARIA-ERCSVMITKVSKSTFEAPSAESCKTLFAKGS 237
Query: 244 VEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
+ D + F A + L + G + + ++ + MRLDS+ L++
Sbjct: 238 MIEDADQIGCFHAA----------VQFLKIATGIGLFKVFPMNMANTMRLDSSIFENLHL 287
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
+D K SLF ++ C G R + W+ QPL+ I R +IV A +++ +
Sbjct: 288 C---SDTEK--SLFSILAMHCATPHGVRRVRQWITQPLMLEQSILERQNIVAALIENGDI 342
Query: 364 RQDLRQ-HLKRISDIERLMHNLEKRRAG--------LQQIVKLYQSSIRLPYIRSALQQY 414
R+ L LK + DI R+ L++ G L+ +++ R+P I L +
Sbjct: 343 RERLSSVALKGLPDIARIAFKLKQLDTGKAINYKLALRSFGRIHDLCKRVPTIMETLNET 402
Query: 415 EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
+ I E PL + D + K I L E+ +D+ + + I D L
Sbjct: 403 DDP----IFEPISSPLSIV--DGKIQKLILLFESHIDMTR----NFSIKRGIDNDLDEQV 452
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKG--TQFGHVFRITKKEEPKI---RKKL 529
+ E + ++ L A LDLPV + +KLD T G VFR+T K + + K+
Sbjct: 453 EKAEEVVARMAELSHDAADALDLPVSE-VKLDDAPVTIGGKVFRVTNKNDKAVLAAEKRG 511
Query: 530 TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSL 589
T F + T K + FT+ +L+ L D++ + +N + +V R++ + +++ +
Sbjct: 512 T--FTRVSTTKGAITFTSNRLQLLSDEFNEFNIHVQNLTRVIVERMLGIVLGYTKYLLQI 569
Query: 590 ATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDC 649
+ S LD LL+ + A + P+T+P + +I +E RHP +E+Q V +PND
Sbjct: 570 GDITSSLDALLALSHAALASSEPWTKPMFT--EKKEIEVEELRHPILESQ-LVECVPNDV 626
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
K+ + I+TGPNMGGKSTF+R VG+ L+AQ+GSFVP A I + D I AR+GAG
Sbjct: 627 KMSEDRR-LMILTGPNMGGKSTFLRSVGLCSLLAQIGSFVPAASAQIPIVDTIIARIGAG 685
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D RG+STF EM+ET +I + AT+RSL++IDELGRGTST+DGFGLA+AI EH+V +I+
Sbjct: 686 DNLQRGISTFQHEMIETETIFRCATERSLLLIDELGRGTSTWDGFGLAYAISEHIVTKIK 745
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQ 829
+ T FATH+HE+ +LA + GV N H S + ++T LYKV G C Q
Sbjct: 746 SLTFFATHYHEMASLA---------SRCKGVFNMHTSVFV--RDERITHLYKVSDGPCAQ 794
Query: 830 SFGIHVAEFANFPESVVTLA---REKAAELEDFTPSAVISDD 868
S+GI +A+ A F V+ A E+ AE+E +A + D+
Sbjct: 795 SYGIEIAKLAGFEHGVIKRANELNEEKAEVEMALATAQLDDE 836
>gi|289578351|ref|YP_003476978.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
gi|289528064|gb|ADD02416.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
Length = 866
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 206/579 (35%), Positives = 320/579 (55%), Gaps = 38/579 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +SYM LDS A++ L +LES + +K SL G++++T T MG RLL WL++PLL+
Sbjct: 260 YEDNSYMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTP-MGGRLLKKWLEEPLLNK 318
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I+ARL V+ +D RQDL+Q L +I D+ERL + + + + + S L
Sbjct: 319 EHIDARLQAVEELFNDYKNRQDLKQLLNKIYDLERLSSKIVYQSINPKDFISIKLSLQNL 378
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
PYI+ LQ++ + I E++ D L L++ S+ D QL+ G +
Sbjct: 379 PYIKEILQRFSSRLLKDIYEKF----------DTLQDIYELIDKSIKDDPSTQLKEGN-I 427
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y+ + L+ + I +L + + K L++ FG+ +TK
Sbjct: 428 IKDGYNETVDKLRKASVEGKNWIANLEAEEREKTGI---KNLRIGYNKVFGYYIEVTKSN 484
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P++ ++ +I +T + ++ +LK++ + E+ + +L N + +
Sbjct: 485 IPQVPER----YIRKQTLANAERYVTPELKEIEEAILGAEEKLIELEYQLFNEIREKIEL 540
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ A ++ +DVL+SFA++A + YT+P ++ D I+++ RHP +E
Sbjct: 541 QIVRIQDTAKYIATIDVLISFAEVAET--NRYTKPIVDYSD--RIVIKEGRHPVIETISD 596
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
+F+ ND + I ++ IITGPNM GKST++RQV + +LMAQ+GSFVP A I + D
Sbjct: 597 ESFVANDIE-IGPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDK 655
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF RVGA D G STFM EM E A+ILK AT +SLII+DE+GRGTSTYDG +A A+
Sbjct: 656 IFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVI 715
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
E++ E+I+A TLFATH+HELT L +M GV NY+VS ++ + L K
Sbjct: 716 EYIHEKIKAKTLFATHYHELTKLEG---------KMKGVRNYNVS--VEEREDDIIFLRK 764
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
+ PG D+S+GI V++ A P S+V A+E LE+ T
Sbjct: 765 IVPGGADKSYGIQVSKLAGLPYSIVERAKEILKSLENDT 803
>gi|167382192|ref|XP_001736005.1| DNA mismatch repair protein MSH2 [Entamoeba dispar SAW760]
gi|165901736|gb|EDR27769.1| DNA mismatch repair protein MSH2, putative [Entamoeba dispar
SAW760]
Length = 594
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 203/623 (32%), Positives = 344/623 (55%), Gaps = 75/623 (12%)
Query: 286 SLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVN 345
++D+ M ++ A+ L++ K K +LF +NRT T +G++++ W++QPL+D +
Sbjct: 5 AIDNGMIIEEEAIEGLHLFGDK----KEMTLFKHLNRTHTK-IGEKMIKEWIRQPLIDKD 59
Query: 346 EINARLDIVQAFVDDTALRQDLR-QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+IN RL++V+ F +++ + ++ + L ++D+E+L+ + K + L+ IVKLY++ +R+
Sbjct: 60 KINKRLELVEGFYENSEIGLKIKNEELAIMADLEKLIKGINK--SDLESIVKLYEA-VRI 116
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
K+R + +E KF +V T +D+++ +N + I
Sbjct: 117 S-----------------KKRISEEME---------KFEEMVVTLIDIEETKNHVFKIRE 150
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
+D GL ++ + +E +Q A+DL + DK ++ + R++K E
Sbjct: 151 DFDEGLQKIRENHKKVEELFEKCLEQAANDLSIKTDKIKIIEYNNNL--ILRVSKSNEK- 207
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
K ++ V++T K KFT +++ L + K+ + + K+ + + + + E
Sbjct: 208 -EVKKNKKYTVIQTLKGECKFTFKEMQTLNVKRDKLNLKEEEINKKFIEEINKVIEGYKE 266
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF 644
FK L ++ +D + SFA N + G I ++ +RHP +E F
Sbjct: 267 TFKELENIIGYIDCIQSFAT--------------NESEKGIIKIKKARHPLIENNSINTF 312
Query: 645 IPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFA 704
I ND + R ++ FQIITGPNMGGKST++R +G+ ++MAQ+G F+PC IS+ D I
Sbjct: 313 IENDIDINRKETRFQIITGPNMGGKSTYLRMIGLCVIMAQIGMFIPCSEVDISICDKIMC 372
Query: 705 RVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL 764
R+GAGD + G+STFM EM +T+ I+K +T SL++IDELGRGTSTYDGFG+AW I E+L
Sbjct: 373 RIGAGDNIVEGMSTFMSEMKDTSEIIKKSTKNSLVLIDELGRGTSTYDGFGIAWGISEYL 432
Query: 765 VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEP 824
+I +FATHFHE+T L K++ GV N HV A D ++L + YK++
Sbjct: 433 AIDIGCYCVFATHFHEITGLE---------KRVNGVINKHVEA--DIIDKQLVLKYKIKN 481
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV-GSKRKRISD- 882
G+ +QS I+VAE+A+FP VV A+ KA EL+ P + KIE+ +K + D
Sbjct: 482 GSTEQSLAIYVAEWADFPHEVVESAKRKAKELDLDQPDS----KKKIEIFTNKIPLLKDE 537
Query: 883 -----PNDMSRGAARAHQFLKEF 900
P+D+ +G + + F+ E+
Sbjct: 538 IPQITPDDIVKGKSIINNFIHEY 560
>gi|167040248|ref|YP_001663233.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750830|ref|ZP_05491715.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914332|ref|ZP_07131648.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307724432|ref|YP_003904183.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
gi|166854488|gb|ABY92897.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750413|gb|EEU63432.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889267|gb|EFK84413.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307581493|gb|ADN54892.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
Length = 867
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 328/603 (54%), Gaps = 38/603 (6%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
+L AL SY + L + + Y +SYM LDS A++ L +LES + +K SL G
Sbjct: 234 NSLAALFSYLQELQKTALKHINKLLIYEDNSYMGLDSNAIKNLEILESNKNKSKKGSLLG 293
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
++++T T MG RLL WL++PLL+ I+ARL V+ +D RQDL+Q L +I D+E
Sbjct: 294 VLDKTVTP-MGGRLLKKWLEEPLLNKEHIDARLQAVEELFNDYKNRQDLKQLLNKIYDLE 352
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL + + + + + S LPYI+ L+++ + I E++ D
Sbjct: 353 RLASKIVYQSINPKDFISIKLSLQNLPYIKEILEKFNSRLLKEICEKF----------DI 402
Query: 439 LNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L L++ S+ D QL+ G +I Y+ + L+ + I +L +
Sbjct: 403 LQDIYELIDKSIKDDPSTQLKEGN-IIKDGYNETVDKLRKASTEGKNWIANLEAEEREKT 461
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K L++ FG+ +TK P++ ++ FI +T + ++ +LK++ +
Sbjct: 462 GI---KNLRIGYNKVFGYYIEVTKSNIPQVPER----FIRKQTLANAERYVTPELKEIEE 514
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
E+ + +L N + + ++ A ++ +DVL+SFA++A + Y +
Sbjct: 515 TILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAET--NRYIK 572
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
P ++ D I+++ RHP +E +F+ ND I ++ IITGPNM GKST++RQ
Sbjct: 573 PIVDYSD--RIVIKEGRHPVIETISDESFVANDID-IGSENPIMIITGPNMAGKSTYMRQ 629
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +LMAQ+GSFVP A I + D IF RVGA D G STFM EM E A+ILK AT
Sbjct: 630 VALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATS 689
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SLII+DE+GRGTSTYDG +A A+ E++ E+I+A TLFATH+HELT L
Sbjct: 690 KSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTKLEG--------- 740
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+M GV NY+VS ++ + L K+ PG D+S+GI V++ A P S+V A+E
Sbjct: 741 KMKGVRNYNVS--VEEREDDIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNS 798
Query: 856 LED 858
LE+
Sbjct: 799 LEN 801
>gi|326389401|ref|ZP_08210968.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
gi|325994406|gb|EGD52831.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
Length = 867
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/602 (34%), Positives = 328/602 (54%), Gaps = 38/602 (6%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
+L AL SY + L + + Y +SYM LDS A++ L +LES + +K SL G
Sbjct: 234 NSLAALFSYLQELQKTALKHINKLLIYEDNSYMGLDSNAIKNLEILESNRNKSKKGSLLG 293
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
++++T T MG RLL WL++PLL+ I+ARL+ V+ +D RQDL+Q L +I D+E
Sbjct: 294 VLDKTVTP-MGGRLLKKWLEEPLLNKEHIDARLEAVEELFNDYKNRQDLKQFLNKIYDLE 352
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL + + + + + S LPYI+ L+++ + I E++ D
Sbjct: 353 RLASKIVYQSINPKDFISIKLSLQNLPYIKEILEKFNSRLLKEICEKF----------DT 402
Query: 439 LNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L L++ S+ D QL+ G +I Y+ + L+ + I +L +
Sbjct: 403 LQDIYELIDKSIKDDPSTQLKEGN-IIKDGYNETVDKLRKASTEGKNWIANLEAEEREKT 461
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K L++ FG+ +TK P++ ++ +I +T + ++ +LK++ +
Sbjct: 462 GI---KNLRIGYNKVFGYYIEVTKSNIPQVPER----YIRKQTLANAERYVTPELKEIEE 514
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
E+ + +L N + + ++ A ++ +DVL+SFA++A + Y +
Sbjct: 515 TILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISFAEVAET--NRYIK 572
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
P ++ D I+++ RHP +E +F+ ND I ++ IITGPNM GKST++RQ
Sbjct: 573 PIVDYSD--RIVIKEGRHPVIETISDESFVANDID-IGPENPIMIITGPNMAGKSTYMRQ 629
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +LMAQ+GSFVP A I + D IF RVGA D G STFM EM E A+ILK AT
Sbjct: 630 VALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATS 689
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SLII+DE+GRGTSTYDG +A A+ E++ E+I+A TLFATH+HELT L
Sbjct: 690 KSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTKLEG--------- 740
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+M GV NY+VS ++ + L K+ PG D+S+GI V++ A P S+V A+E
Sbjct: 741 KMRGVRNYNVS--VEEREDDIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNS 798
Query: 856 LE 857
LE
Sbjct: 799 LE 800
>gi|156094800|ref|XP_001613436.1| DNA mismatch repair enzyme [Plasmodium vivax Sal-1]
gi|148802310|gb|EDL43709.1| DNA mismatch repair enzyme, putative [Plasmodium vivax]
Length = 905
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/483 (37%), Positives = 283/483 (58%), Gaps = 25/483 (5%)
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIAL 445
K ++ +VK+Y + + I L YEG+ + ++ +L PL+ + L+ F+ L
Sbjct: 359 KNTCSIEDLVKMYDTVVVSKRIYYCLNDYEGKHRNTLERNFLTPLKEVLI--CLDSFVKL 416
Query: 446 VETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL-------- 497
+E +VD D+L N ++IS +D L L +E++ I ++ D++
Sbjct: 417 IELTVDFDELCNNNFLISRKFDEQLEKLASEKDETLGMIKEHRQEVEDDINHLKGVSKKN 476
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
+ +KL +FR KK+ I+++ T F V K + FT KLK+L +Y
Sbjct: 477 NAKEDIKLVDCNVNTFLFRAVKKDMSSIQQRKKTYFQV-RMNKSEILFTTNKLKELCKRY 535
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ +L++Y Q++L N+ IQ A ++ E LA +++++DVL +FA +++S + Y RP
Sbjct: 536 EYILQDYNLSQEQLANKAIQVASSYWEPTTKLAKLIAQIDVLCAFAFVSASSLSVYVRPI 595
Query: 618 INPPDVGDII-LEGSRHPCVEAQDWV--NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
+ G ++ L SRHP VE+ + NFIPND + + IITGPNMGGKST+IR
Sbjct: 596 VETN--GQVLHLIESRHPLVESNFLLMNNFIPNDVHMNKTDKRLNIITGPNMGGKSTYIR 653
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q+ + LMAQ+G FVPC A + + I RVG+ D QL+G+STF EM+E ++I+K A
Sbjct: 654 QIALICLMAQIGCFVPCTYAKMPIFSQIMCRVGSSDIQLKGISTFFSEMIEISAIIKNAD 713
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNT 794
D +L+IIDELGRGTSTY+GFG++WA+ ++++ +I+ LFATHFHE++ L E
Sbjct: 714 DNTLVIIDELGRGTSTYEGFGISWAVAQYILNKIKCFCLFATHFHEMSNLEDEYQ----- 768
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
G N HV A ID +K++ LY+++ G D+S+G+HVA+ A P+ V+ A EK+
Sbjct: 769 ----GATNNHVGAKIDPEKKKISFLYEIKKGYADKSYGVHVAQIAKLPQKVIDKAFEKSK 824
Query: 855 ELE 857
ELE
Sbjct: 825 ELE 827
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 152/286 (53%), Gaps = 21/286 (7%)
Query: 115 KSGTP--GNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEF 172
+SG+P G G+ + A++ + +P +++ + N G+ ++ L E+
Sbjct: 13 QSGSPAVGTAGADSPAMDADSVV--SPTVMSFNMETKNNIKYSGICIYNMNTNEFSLCEY 70
Query: 173 LDDSHFTNVESALVALGCK-ECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEF-KTR 230
+++ HFT +ES L+ C+ C L + + K ++ L+ C + E K++F +
Sbjct: 71 IENEHFTILESLLIQ--CRPTCFLYLSSNDKLDDKRVKLILSLCEIKHRELGKSDFYNSC 128
Query: 231 DLVQDLDRLVRGSVEPVRDLVSGF--EIAPGALGALLSYAELLSDESNYGNYYIRKYSLD 288
+ DL++L++ + E V++ +S F ++A + +++ + LL+D S + Y+++
Sbjct: 129 SMENDLNKLLKPT-EDVKNCISFFKMQLACRSFTSIVKHLNLLNDYSATNKCLLTNYNIN 187
Query: 289 SYMRLDSAAMRALNV------LESKTDANK--NFSLFGLMNRTCTAGMGKRLLHMWLKQP 340
Y++LD AA ALNV +E K ++ N +LF +N+ C +G+R L W+ P
Sbjct: 188 RYLKLDMAATIALNVHAEHMLVEKKASGSRGGNLTLFTFLNK-CKTKIGERKLLQWVMHP 246
Query: 341 LLDVNEINARLDIVQAFVDDTALRQDLRQ-HLKRISDIERLMHNLE 385
+ D +IN RLD+V +D +R ++ +L+++SD++ ++ L+
Sbjct: 247 IRDEAKINERLDMVSILKEDGVMRSMIQSDYLRKVSDLDVIIKKLK 292
>gi|345017667|ref|YP_004820020.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033010|gb|AEM78736.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 867
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 327/603 (54%), Gaps = 38/603 (6%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
+L AL SY + L + + Y +SYM LDS A++ L +LES + +K SL G
Sbjct: 234 NSLAALFSYLQELQKTALKHINKLLIYEDNSYMGLDSNAIKNLEILESNKNKSKKGSLLG 293
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
++++T T MG RLL WL++PLL+ I+ARL V+ +D RQDL+Q L +I D+E
Sbjct: 294 VLDKTVTP-MGGRLLKKWLEEPLLNKEHIDARLQAVEELFNDYKNRQDLKQLLNKIYDLE 352
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL + + + + + S LPYI+ L+++ + I E++ D
Sbjct: 353 RLASKIVYQSINPKDFISIKLSLQNLPYIKEILEKFNSRLLKEICEKF----------DI 402
Query: 439 LNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L L++ S+ D QL+ G +I Y+ + L+ + I +L +
Sbjct: 403 LQDIYELIDKSIKDDPSTQLKEGN-IIKDGYNETVDKLRKASTEGKNWIANLEAEEREKT 461
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K L++ FG+ +TK P++ ++ FI +T + ++ +LK++ +
Sbjct: 462 GI---KNLRIGYNKVFGYYIEVTKSNIPQVPER----FIRKQTLANAERYVTPELKEIEE 514
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
E+ + +L N + + ++ A ++ +DVL+SFA++A + Y +
Sbjct: 515 TILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAET--NRYIK 572
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
P ++ D I++ RHP +E +F+ ND I ++ IITGPNM GKST++RQ
Sbjct: 573 PIVDYSD--RIVITEGRHPVIETISDESFVANDID-IGSENPIMIITGPNMAGKSTYMRQ 629
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +LMAQ+GSFVP A I + D IF RVGA D G STFM EM E A+ILK AT
Sbjct: 630 VALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATS 689
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SLII+DE+GRGTSTYDG +A A+ E++ E+I+A TLFATH+HELT L
Sbjct: 690 KSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTKLEG--------- 740
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+M GV NY+VS ++ + L K+ PG D+S+GI V++ A P S+V A+E
Sbjct: 741 KMKGVRNYNVS--VEEREDDIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNS 798
Query: 856 LED 858
LE+
Sbjct: 799 LEN 801
>gi|167037586|ref|YP_001665164.1| DNA mismatch repair protein MutS [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116001|ref|YP_004186160.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856420|gb|ABY94828.1| DNA mismatch repair protein MutS [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929092|gb|ADV79777.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 867
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 209/603 (34%), Positives = 328/603 (54%), Gaps = 38/603 (6%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
+L AL SY + L + + Y +SYM LDS A++ L +LES + +K SL G
Sbjct: 234 NSLAALFSYLQELQKTALKHINKLLIYEDNSYMGLDSNAIKNLEILESNRNKSKKGSLLG 293
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
++++T T MG RLL WL++PLL I+ARL+ V+ +D RQDL+Q L +I D+E
Sbjct: 294 VLDKTVTP-MGGRLLKKWLEEPLLSKEHIDARLEAVEELFNDYKNRQDLKQFLNKIYDLE 352
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL + + + + + S LPYI+ L+++ + I E++ D
Sbjct: 353 RLASKIVYQSINPKDFISIKLSLQNLPYIKEILEKFNSRLLKEICEKF----------DT 402
Query: 439 LNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L L++ S+ D QL+ G +I Y+ + L+ + I +L +
Sbjct: 403 LQDIYELIDKSIKDDPSTQLKEGN-IIKGGYNEIVDKLRKASTEGKNWIANLEAEEREKT 461
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K L++ FG+ +TK P++ ++ +I +T + ++ +LK++ +
Sbjct: 462 GI---KNLRIGYNKVFGYYIEVTKSNIPQVPER----YIRKQTLANAERYVTPELKEIEE 514
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
E+ + +L N + + ++ A ++ +DVL+SFA++A + Y +
Sbjct: 515 TILGAEEKLIELEYQLFNEIREKVELQIVRIQNTAKYIATIDVLISFAEVAET--NRYIK 572
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
P ++ D I+++ RHP +E +F+ ND I ++ IITGPNM GKST++RQ
Sbjct: 573 PIVDYSD--RIVIKEGRHPVIETISDESFVANDID-IGPENPIMIITGPNMAGKSTYMRQ 629
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +LMAQ+GSFVP A I + D IF RVGA D G STFM EM E A+ILK AT
Sbjct: 630 VALIVLMAQIGSFVPASYAKIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILKSATS 689
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SLII+DE+GRGTSTYDG +A A+ E++ E+I+A TLFATH+HELT L
Sbjct: 690 KSLIILDEVGRGTSTYDGMSIAHAVIEYIHEKIKAKTLFATHYHELTKLEG--------- 740
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+M GV NY+VS ++ + L K+ PG D+S+GI V++ A P S+V A+E
Sbjct: 741 KMKGVRNYNVS--VEEREDDIIFLRKIVPGGADKSYGIQVSKLAGLPYSIVERAKEILNS 798
Query: 856 LED 858
LE+
Sbjct: 799 LEN 801
>gi|392940989|ref|ZP_10306633.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
gi|392292739|gb|EIW01183.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
Length = 867
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 318/576 (55%), Gaps = 38/576 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +SYM LDS A++ L +LES + +K SL G++++T T MG RLL WL++PLL+
Sbjct: 260 YEDNSYMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTP-MGGRLLKKWLEEPLLNK 318
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I+ARL+ V+ +D RQDL+Q L +I D+ERL + + + + + S L
Sbjct: 319 EHIDARLEAVEELFNDYKNRQDLKQFLNKIYDLERLASKIVYQSINPKDFISIKLSLQNL 378
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
PYI+ L+++ + I E++ D L L++ S+ D QL+ G +
Sbjct: 379 PYIKEILEKFNSRLLKEICEKF----------DTLQDIYELIDKSIKDDPSTQLKEGN-I 427
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y+ + L+ + I +L + + K L++ FG+ +TK
Sbjct: 428 IKDGYNETVDKLRKASTEGKNWIANLEAEEREKTGI---KNLRIGYNKVFGYYIEVTKSN 484
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P++ ++ +I +T + ++ +LK++ + E+ + +L N + +
Sbjct: 485 IPQVPER----YIRKQTLANAERYVTPELKEIEETILGAEEKLIELEYQLFNEIREKVEL 540
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
++ A ++ +DVL+SFA++A + Y +P ++ D I+++ RHP +E
Sbjct: 541 QIVRIQNTAKYIATIDVLISFAEVAET--NRYIKPIVDYSD--RIVIKEGRHPVIETISD 596
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
+++ ND I ++ IITGPNM GKST++RQV + +LMAQ+GSFVP A I + D
Sbjct: 597 ESYVANDID-IGPENPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAKIGIVDK 655
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF RVGA D G STFM EM E A+ILK AT +SLII+DE+GRGTSTYDG +A A+
Sbjct: 656 IFTRVGASDDIFAGQSTFMVEMSEVANILKSATSKSLIILDEVGRGTSTYDGMSIAHAVI 715
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
E++ E+I+A TLFATH+HELT L +M GV NY+VS ++ + L K
Sbjct: 716 EYIHEKIKAKTLFATHYHELTKLEG---------KMRGVRNYNVS--VEEREDDIIFLRK 764
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ PG D+S+GI V++ A P S+V A+E LE
Sbjct: 765 IVPGGADKSYGIQVSKLAGLPYSIVERAKEILNSLE 800
>gi|156039323|ref|XP_001586769.1| hypothetical protein SS1G_11798 [Sclerotinia sclerotiorum 1980]
gi|154697535|gb|EDN97273.1| hypothetical protein SS1G_11798 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 402
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 172/378 (45%), Positives = 224/378 (59%), Gaps = 52/378 (13%)
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
A DL ++K + L+ G R+T+ E IR K +++ +T K GV FT +KL
Sbjct: 8 VAKDLGQEIEKKIFLENNKIHGWCMRLTRTEASCIRNK--SKYQECQTLKSGVFFTTSKL 65
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
L ++ ++ E Y Q LV+ V+ A ++ + ++LA++L+ LDV++S A ++ P
Sbjct: 66 LSLRREFDQLSENYNRTQTSLVHEVVAVAASYCPVIETLASILAHLDVIVSLAHTSAHAP 125
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
T Y RP ++P G IL+ +RHPC+E QD V FI ND L+R +S F IITGPNMGGKS
Sbjct: 126 TSYVRPKMHPRGTGSTILKEARHPCMEMQDDVQFITNDVSLVRDESSFLIITGPNMGGKS 185
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T+IRQ+GV LMAQ+G FVPC A +++ DCI ARVGA D QL+GVSTFM EMLETA+IL
Sbjct: 186 TYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQLKGVSTFMAEMLETANIL 245
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
K AT SLIIIDELGRGTSTYDGFGLAWAI E++V+EI A
Sbjct: 246 KSATSESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAF------------------- 286
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+E G CDQSFGIHVAE FP+ V+ +AR
Sbjct: 287 -------------------------------IEEGICDQSFGIHVAELVKFPKKVINMAR 315
Query: 851 EKAAELEDFTPSAVISDD 868
KA ELEDF S + D
Sbjct: 316 RKAEELEDFGTSTKVDVD 333
>gi|406967699|gb|EKD92716.1| hypothetical protein ACD_28C00354G0004, partial [uncultured
bacterium]
Length = 776
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 258/826 (31%), Positives = 402/826 (48%), Gaps = 74/826 (8%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEF 172
+V+ TPG ++ +VL + + +VA+ P GL +D+T G+ E
Sbjct: 12 VVRVVTPGT--TFSEVLL---DQKTNNYVVAILPQRNR----FGLATIDITTGSFGVTEV 62
Query: 173 LDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVML--TERKKTEFKTR 230
+ + L L +ECLLP +SS+ KTL +AL V T + + T
Sbjct: 63 ---EGYDQLALELQRLKPRECLLPLLHGESSDLKTLCEALDDVHVYFHSTPQNPEKILTH 119
Query: 231 DLVQDLDRLVRGSVEPVRDLVSG-FEIAPGALGALLSYAELLSDESNYGNYYIRK---YS 286
L + V L G + IA A G L+ Y L + G ++++ Y
Sbjct: 120 QL----------KISTVEALGLGQWPIAVNAAGFLVEY---LRETQKNGLIHLKRPKPYL 166
Query: 287 LDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNE 346
+M LD A +R L +L + D K SL G+++RT TA MG RLL W +PL + N
Sbjct: 167 PGEFMLLDEATLRNLELLSTFHDHKKEGSLLGVLDRTQTA-MGGRLLKQWTVRPLTEKNR 225
Query: 347 INARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPY 406
I RLD V+ F+ + ++ + L + + I D+ER + L R + + L S RLP
Sbjct: 226 IQVRLDAVENFIKEGSIFETLWEEMGHILDLERSVARLSLERGTPRDAMALKSSLQRLPL 285
Query: 407 IRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLENGEYMI 462
++S L + ++++ L PL L ++L++ S+ L+ E G I
Sbjct: 286 VKSLLSALNAPLLAELQKK-LQPLPDL---------VSLIDASIVEEPPLNLKEGG--FI 333
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
+ L L++ + I +L +Q + +LK+ FG+ I+K
Sbjct: 334 REGFHEELDELRSLSREGKGFIKNLQQQEIQRTGI---SSLKVKYNRVFGYYIEISKSNL 390
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTF 582
+ + T + +T + ++ +LK ++ ++ K + EL + +T +
Sbjct: 391 GNVPENYTRK----QTLVNAERYITPELKTYEEKVLTAEDKSKALEAELFRELRETIMES 446
Query: 583 SEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV 642
+ + A ++ELDVLLSF +A Y +P + D + ++G RHP VE +
Sbjct: 447 IGLIQQNAEAIAELDVLLSFTSVA--LKNRYVKPQLR--DDFTLTIQGGRHPVVETMNPS 502
Query: 643 -NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
+FIPND +ITGPNM GKSTF+RQV + LMAQ+GS+VP A I+V D
Sbjct: 503 GDFIPNDTHFNAENQQILLITGPNMSGKSTFLRQVALISLMAQIGSYVPAQSAEIAVVDR 562
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF RVGA D +G STFM EM E A+IL AT RSLII+DE+GRGTSTYDG +AWAI
Sbjct: 563 IFTRVGASDNLSKGQSTFMVEMQEAANILNNATARSLIILDEIGRGTSTYDGLSIAWAIL 622
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
E+L ++I A TLFATH+HEL A+ T+++ NY V H D T + L+K
Sbjct: 623 EYLHQQIGAKTLFATHYHELIAV---------TERLERAQNYCVLVHED-TQNGVVFLHK 672
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS 881
++ G D+S+GI VA+ A P +V+ A+ +LE+ V+ E+ + S
Sbjct: 673 IQAGGIDKSYGIEVAKLAGLPRAVIEKAQHILKDLEE----GVVEKGIPAELQAHHVDRS 728
Query: 882 DPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
S+G H ++ + + + EAL+ + +K D E D
Sbjct: 729 HSGLSSQGLHSPHPIAEKLKKVDVNHLTPMEALQLLVELKRDSEMD 774
>gi|395731848|ref|XP_002812098.2| PREDICTED: DNA mismatch repair protein Msh2-like [Pongo abelii]
Length = 486
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 177/475 (37%), Positives = 288/475 (60%), Gaps = 28/475 (5%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L+R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSY 466
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ++ + ++SSS+
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQVKKPKKVVSSSH 474
>gi|397904383|ref|ZP_10505299.1| DNA mismatch repair protein MutS [Caloramator australicus RC3]
gi|397162603|emb|CCJ32633.1| DNA mismatch repair protein MutS [Caloramator australicus RC3]
Length = 858
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/645 (33%), Positives = 349/645 (54%), Gaps = 35/645 (5%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I+KY++ +M LDS + L + E+ +K +L ++++T TA MG RLL W+++PL
Sbjct: 247 IKKYNISDFMILDSFTRKNLELTETLRTRSKKGTLIDVLDKTLTA-MGGRLLRKWIEEPL 305
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+++ EIN RL+ V+ F+D+ + DLR+ L+ I DIER++ + A + + L QS
Sbjct: 306 MNIKEINKRLEAVEEFIDNIYISSDLREFLRNIYDIERILSKISCESANARDLNALKQSI 365
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
LP I++AL++ S LI+E D ++L DD N A + + + E G +
Sbjct: 366 SMLPDIKAALKECR---SDLIREIEND-FDTL--DDIYNLINAAIIENPPVSVKEGG--I 417
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I S Y+ + L++ + + I L ++ + + K+LK+ FG+ ITK
Sbjct: 418 IKSGYNQEVDKLRDAMLNGKNWIAELEQREKEETGI---KSLKVGYNKVFGYYIEITKAN 474
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
I K ++I +T + +F +LK++ + + + EL V +
Sbjct: 475 LSLIPKD---RYIRKQTLANAERFITPELKEIEENILGAESKIVELEYELFVDVRNKVYS 531
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
E K +A L+ +DVLLSFA + S Y +P+I + +II RHP VE
Sbjct: 532 QVERIKKIAQYLAIIDVLLSFARV--SFENNYVKPEITNDGIIEII--DGRHPVVEKVIS 587
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
F+PND L ++ IITGPNM GKST++RQV + L++QVG FVP +A IS+ D
Sbjct: 588 SPFVPNDTILDNKENMIIIITGPNMAGKSTYLRQVALITLLSQVGCFVPAKKAKISIVDR 647
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF R+GA D G STFM EM E ++ILK AT SLII+DE+GRGTSTYDG +AW++
Sbjct: 648 IFTRIGASDDLSLGQSTFMVEMTEVSNILKNATKNSLIILDEVGRGTSTYDGLSIAWSVI 707
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
E++ + I A TLFATH+HELT L ++ GV NY +S + + L K
Sbjct: 708 EYINKSIGAKTLFATHYHELTELEG---------KIKGVKNYCIS--VKEHGDDIIFLRK 756
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS 881
+ G DQS+GI VA+ A P+ V+ A+E A+LE+ + + D+ EV + +
Sbjct: 757 IVRGGADQSYGIQVAKLAGLPDEVIKKAKEILAKLEENDINKIKKDEVIKEVAT-----T 811
Query: 882 DPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEK 926
+++ + ++ ++E ++ + + EAL R+ + + +K
Sbjct: 812 SSFEINLFNYQENEIIEELKNIDILNITPIEALNRLYSLTNKAKK 856
>gi|254479232|ref|ZP_05092577.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
gi|214034833|gb|EEB75562.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
Length = 866
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 212/601 (35%), Positives = 328/601 (54%), Gaps = 38/601 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
+LGALLSY + L S + Y +SYM LDS A+R L +LES + +K SL G+
Sbjct: 234 SLGALLSYLKELQKTSLKHINKLTLYQDNSYMGLDSNAIRNLEILESNRNKSKKGSLLGV 293
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT T MG RLL WL++PL+D +EI RLD V+ ++ R +L++ L ++ D+ER
Sbjct: 294 LDRTVTP-MGGRLLKKWLEEPLIDKDEIEKRLDAVEELFNNYRERIELKELLNKVYDLER 352
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + + + + + S LP I++ L ++ S L+KE Y E L D L
Sbjct: 353 LASKIVYQSVTPKDFISIKLSLQNLPKIKNILSKFS---SRLLKEIY----EKL---DVL 402
Query: 440 NKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
L++ S+ D QL+ G +I Y+ + L+ + I +L +
Sbjct: 403 QDVYELIDKSIKDDPSNQLKEGN-IIKDGYNEMVDKLRKASTEGKNWIANLEAEEREKTG 461
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+ K L++ FG+ +TK P++ ++I +T + ++ +LK++ +
Sbjct: 462 I---KNLRIGYNKVFGYYIEVTKSNIPQV----PDRYIRKQTLANAERYVTPELKEIEET 514
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
E+ + EL N + + ++ A ++ +DVL+SFA++A + Y +P
Sbjct: 515 ILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAET--NKYVKP 572
Query: 617 DINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
++ D I+++ RHP VE F+ ND I ++ IITGPNM GKST++RQV
Sbjct: 573 IVDYED--RIVIKEGRHPVVETISDEGFVANDID-IGPENPIMIITGPNMAGKSTYMRQV 629
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ +LMAQVG FVP A I + D IF RVGA D G STFM EM E A+IL AT +
Sbjct: 630 ALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSK 689
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLII+DE+GRGTSTYDG +A A+ E++ E+I+A TLFATH+HELT L +
Sbjct: 690 SLIILDEVGRGTSTYDGMSIAQAVIEYIHEKIKAKTLFATHYHELTKLEG---------K 740
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ GV N++VS ++ + L+K+ PG D+S+GI V++ A P S++ A+E L
Sbjct: 741 LRGVRNFNVS--VEEREDDIIFLHKIVPGGSDRSYGIQVSKLAGLPYSIIERAKEILEAL 798
Query: 857 E 857
E
Sbjct: 799 E 799
>gi|20807804|ref|NP_622975.1| DNA mismatch repair protein MutS [Thermoanaerobacter tengcongensis
MB4]
gi|44888228|sp|Q8RA71.1|MUTS_THETN RecName: Full=DNA mismatch repair protein MutS
gi|20516362|gb|AAM24579.1| MutS-like ATPases involved in mismatch repair, family 2
[Thermoanaerobacter tengcongensis MB4]
Length = 869
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 213/601 (35%), Positives = 329/601 (54%), Gaps = 38/601 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
+LGALLSY + L S + Y +SYM LDS A+R L +LES + +K SL G+
Sbjct: 237 SLGALLSYLKELQKTSLKHINKLTLYQDNSYMGLDSNAIRNLEILESNRNKSKKGSLLGV 296
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT T MG RLL WL++PL+D +EI RLD V+ ++ R +L++ L ++ D+ER
Sbjct: 297 LDRTVTP-MGGRLLKKWLEEPLIDKDEIEKRLDAVEELFNNYRERIELKELLNKVYDLER 355
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + + + + + S LP I++ L ++ S L+KE Y E L D L
Sbjct: 356 LASKIVYQSVTPKDFISIKLSLQNLPKIKNILSKFS---SRLLKEIY----EKL---DVL 405
Query: 440 NKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
L++ S+ D QL+ G +I Y+ + L+ + I +L A + +
Sbjct: 406 QDVYELIDKSIKDDPSNQLKEGN-IIKDGYNEMVDKLRKASTEGKNWIANLE---ADERE 461
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
K L++ FG+ +TK P++ ++I +T + ++ +LK++ +
Sbjct: 462 KTGIKNLRIGYNKVFGYYIEVTKSNIPQV----PDRYIRKQTLANAERYVTPELKEIEET 517
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
E+ + EL N + + ++ A ++ +DVL+SFA++A + Y +P
Sbjct: 518 ILGAEEKLIELEYELFNEIREKVELQIVRIQNTAKYIAIIDVLISFAEVAET--NKYVKP 575
Query: 617 DINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
++ D I+++ RHP VE F+ ND I ++ IITGPNM GKST++RQV
Sbjct: 576 IVDYED--RIVIKEGRHPVVETISDEGFVANDID-IGPENPIMIITGPNMAGKSTYMRQV 632
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ +LMAQVG FVP A I + D IF RVGA D G STFM EM E A+IL AT +
Sbjct: 633 ALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSEVANILHSATSK 692
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLII+DE+GRGTSTYDG +A A+ E++ E+I+A TLFATH+HELT L +
Sbjct: 693 SLIILDEVGRGTSTYDGMSIAQAVIEYIHEKIKAKTLFATHYHELTKLEG---------K 743
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ GV N++VS ++ + L+K+ PG D+S+GI V++ A P S++ A+E L
Sbjct: 744 LRGVRNFNVS--VEEREDDIIFLHKIVPGGSDRSYGIQVSKLAGLPYSIIERAKEILEAL 801
Query: 857 E 857
E
Sbjct: 802 E 802
>gi|294496664|ref|YP_003543157.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
gi|292667663|gb|ADE37512.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
Length = 881
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 233/690 (33%), Positives = 358/690 (51%), Gaps = 55/690 (7%)
Query: 252 SGFEIAPGALGALLSYA-ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+G A A L YA E E N+ + + YS +M LDS +R L V+++
Sbjct: 231 AGLPFAKMAASCALEYALETQMRELNHVQF-LHTYSSSEFMILDSITLRNLEVVKNVRGE 289
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
++ ++ +++ T T MG RLL W+ +PLL+V+ IN RLD V+ D+T LR D+R H
Sbjct: 290 GRDTTILQVLDETKTP-MGSRLLQKWILKPLLNVSHINKRLDAVEELSDNTLLRFDVRSH 348
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L + D+ERL+ + + + +V L +S L I S L+ EG+ +++ R + +
Sbjct: 349 LSYVKDVERLVGRVVYGNSNARDLVALKKS---LQAIPSLLETLEGEHKAMLA-RIVQGM 404
Query: 431 ESLTDDDHLNKFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
+ + D L I A+VE L E G +I Y L LK + + I S
Sbjct: 405 KDFREIDTLTDLIERAIVEEP-PLSVREGG--LIKPGYSEELDELKEISSNAKSWIASFQ 461
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNT 548
++ + D K+LK+ G+ +TK P I ++ +I +T + +F
Sbjct: 462 QK---ERDRTGIKSLKVGYNKVIGYYLEVTK---PNI-SQVPDDYIRKQTMTNAERFYTP 514
Query: 549 KLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASS 608
+LK + E+ + EL N VI S+ + +A +L ELDVL S A++A +
Sbjct: 515 QLKDWEGKILSADEKRVALEYELFNEVISVVANHSKQLQEMAVLLGELDVLASLAEVAVN 574
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y RP I D I++ RHP VE FIPND ++ F +ITGPNM G
Sbjct: 575 --NNYVRPSIT--DDCRILIRQGRHPVVENSVDGGFIPNDVEMDCSDEQFLLITGPNMAG 630
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQV + ++MAQ GSFVP AS+ + D IF RVGA D G STFM EM+E A+
Sbjct: 631 KSTYMRQVALIVIMAQAGSFVPASHASVGIVDRIFTRVGAFDDLASGQSTFMVEMVELAN 690
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHFHELTALAH 786
IL +T +SL+++DE+GRGTSTYDG+ +A A+ E++ + R +LFATH+H+LT +A
Sbjct: 691 ILNNSTAKSLVLLDEIGRGTSTYDGYSIAKAVVEYIHNKGRQGVRSLFATHYHQLTEIA- 749
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
+ + V NYH++ D L L K+ PGA D+S+GIHVA A P V
Sbjct: 750 --------ESLKRVKNYHIAVKEDGDD--LVFLRKIVPGATDKSYGIHVARLAGVPHKVT 799
Query: 847 TLAREKAAELEDFTPSAVISDDAKIEVGSKRKR---------ISDPNDMSRGAARAHQ-F 896
A+ + LED +VIS +++ GS+++R + DP +G +
Sbjct: 800 KRAQ---SILEDIESESVISRESE---GSRKRRSGAKYTQLLLVDPE---KGDEKDFDPV 850
Query: 897 LKEFSDMPLETMDLKEALERVKRMKDDLEK 926
+E D+ L + EAL R+ ++ L++
Sbjct: 851 AEEIRDLDLNNLTPMEALNRLHAIQQKLKE 880
>gi|119620620|gb|EAX00215.1| mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli),
isoform CRA_c [Homo sapiens]
Length = 491
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/467 (37%), Positives = 282/467 (60%), Gaps = 29/467 (6%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L+R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENG 458
+++EG+ L+ ++ PL L D +KF ++ET++D+DQ+ NG
Sbjct: 422 EKHEGKHQKLLLAVFVTPLTDLRSD--FSKFQEMIETTLDMDQI-NG 465
>gi|374852923|dbj|BAL55844.1| DNA mismatch repair protein MutS [uncultured candidate division OP1
bacterium]
gi|374855989|dbj|BAL58844.1| DNA mismatch repair protein MutS [uncultured candidate division OP1
bacterium]
Length = 858
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 254/796 (31%), Positives = 389/796 (48%), Gaps = 74/796 (9%)
Query: 141 IVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAV 200
I A++P G G+ Y D++ E +D+ +++ L+ + E +LPT
Sbjct: 124 IAAIYPE----GERCGVAYADISTGEFRATELNNDA----LKNELLRIRPAELILPTGVT 175
Query: 201 KSSEC-KTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPG 259
C + LR AL+ + F T+ L++ L D + E+A
Sbjct: 176 LEGLCGEGLRIALSYV-------EPFRFHTKGLLEHFGILSL-------DGLGLSELAGR 221
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
+ LLSY ES + Y L M LD R L +LE + + +LF +
Sbjct: 222 SAAGLLSYITETQKESLAHLRPPKCYELSRQMGLDPFTQRNLEILEELRGSGTSATLFSV 281
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+N T T GMG+RLL WL PL+D EI RLD V+ F+ + RQ +RQ ++RI D+ER
Sbjct: 282 LNHTVT-GMGERLLRQWLLAPLVDRVEIERRLDAVEFFLIHSIERQTVRQIVERIYDLER 340
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH- 438
L L R + ++ L QS RLP + L Q+ G E + + L + H
Sbjct: 341 LAGRLGAGRITPRDLLSLRQSLERLPELNDLLTQWAG------AEGFPEKLRGFAQELHA 394
Query: 439 --LNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
L++ AL+ ++ D +L+ G +I+ + L LK +Q +R+I L +
Sbjct: 395 LALDELRALLRRAIRDDAPLELKEGN-IITEGFSQELDELKAQQRIYKRKIVELEARERE 453
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ + LK+ T FG+ ++K K++ ++ +T + +F +LK+
Sbjct: 454 RTGI---QTLKVGFNTVFGYYIEVSKAAA----KRVPPEYHRKQTLANAERFITPELKEY 506
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
++ E K + EL V A +IF+ ++ L A + Y
Sbjct: 507 EEKILSAEERSKRLEYELFCGVRDEAA--KKIFEIQQLGRIVAELDLLAALAEVAHRLHY 564
Query: 614 TRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
TRP D +I + RHP VE F+PND + R + ++TGPNM GKS +
Sbjct: 565 TRPRFT--DKHEIFIAEGRHPIVETLLPSGAFVPNDL-VFREGEYLIVLTGPNMSGKSVY 621
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQV + L+AQ+GSFVP A++ + D IFARVGA D G STFM EMLETA+IL
Sbjct: 622 LRQVALICLLAQIGSFVPAREATLPIVDRIFARVGASDMLAAGYSTFMVEMLETANILNN 681
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT+RSLII+DE+GRGTST+DG +AWA+ EHL +IRA TLFATH+HELT LA
Sbjct: 682 ATERSLIILDEMGRGTSTFDGVSIAWAVAEHLATKIRAKTLFATHYHELTKLA------- 734
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+++ G+ N HV + ++ L+KV GA + S+G+HVA A P+ + A
Sbjct: 735 --ERVPGIKNCHV--QVKEYGNQVIFLHKVADGATEGSYGVHVARMAGLPQEITRKA--- 787
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRKRISDP---NDMSRGAARAHQFLKEFSDMPLETMD 909
D ++ ++ +G R+R DP ++ AA H +KE + + +
Sbjct: 788 -----DEILQRILQNNPLDAMGELRRR--DPRFVKQLAIFAAEEHPVVKELKKIDINALT 840
Query: 910 LKEALERVKRMKDDLE 925
EALE V ++K +E
Sbjct: 841 PLEALELVAQLKRKIE 856
>gi|328950999|ref|YP_004368334.1| DNA mismatch repair protein mutS [Marinithermus hydrothermalis DSM
14884]
gi|328451323|gb|AEB12224.1| DNA mismatch repair protein mutS [Marinithermus hydrothermalis DSM
14884]
Length = 846
Score = 315 bits (808), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 213/600 (35%), Positives = 323/600 (53%), Gaps = 38/600 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIR--KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
A GA+L+YA L + R +Y +YM+LD A+ L V E++ + +LF
Sbjct: 237 AAGAVLAYA--LETQQGRLAQVTRFLRYDPGAYMQLDGVALATLEVFEAQFGGGEERTLF 294
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
G++N+T TA G+RLL WL+ PLLD N I ARL+ V+AFV D LR+ +R+ L ++ D+
Sbjct: 295 GVLNQTRTA-PGRRLLREWLRHPLLDRNLIEARLEAVEAFVRDAVLRRAVRRALYKVHDL 353
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL L RA + + L +S +P +R+ L+ E + ER LD + + +
Sbjct: 354 ERLAGRLASHRASARDLAALARSLRLVPALRAELEGCEEDALLALAER-LDGMAEVRERI 412
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
ALVE D Q +I YD L L+ E+ I +L + +
Sbjct: 413 E----AALVE---DPPQKLTEGGLIKDGYDAELDRLRGAAEAGRAWIAALEAKERERTGI 465
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
P LK+ FG+ +T+ ++ + ++T KD ++T L++ +
Sbjct: 466 PT---LKVGFNGVFGYYLEVTRP----YYAQVPEDYRAVQTLKDRQRYTRPDLREKEREI 518
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ E + + + + + + V ++E + LA L+ELDV + A++A+ YTRP
Sbjct: 519 LRAEEAARKREYAVFSELREALVPYAERVRDLAAALAELDVYAALAEVAAQYN--YTRPR 576
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
+ + G + RH VE FIPND +L + I+TGPNM GKST++RQ
Sbjct: 577 FS--EDGVFRVRQGRHAVVERHG--AFIPNDLEL-SPQQRLVILTGPNMSGKSTYLRQNA 631
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ +L+AQ+GSFVP + A + V D I+ R+GA D G STFM EM E A IL+GAT+RS
Sbjct: 632 LIVLLAQIGSFVPAEEAVLPVVDRIYTRIGAADDIAGGRSTFMVEMEELARILQGATERS 691
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQM 797
L+++DE+GRGTSTYDG LAWA E+L + +RA TLFATH+ ELTAL +++
Sbjct: 692 LVLLDEVGRGTSTYDGLSLAWAAAEYLHDTVRAYTLFATHYFELTAL---------PQRL 742
Query: 798 VGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N+HV+A ++ L ++V PG +S+G+ VA A P VVT A++ A LE
Sbjct: 743 PAARNFHVAAKEEAGG--LVFYHQVLPGPASKSYGLEVARLAGVPPEVVTRAQQLLAGLE 800
>gi|336477855|ref|YP_004616996.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
gi|335931236|gb|AEH61777.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
Length = 881
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 344/652 (52%), Gaps = 41/652 (6%)
Query: 280 YYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQ 339
+ +R YS +M LDS +R L V+ + K+ ++ G+++ T T MG R+L W+ +
Sbjct: 259 HTLRTYSDSDFMILDSITLRNLEVVRNVRGEGKSATILGVLDDTMTP-MGSRILQKWILK 317
Query: 340 PLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQ 399
PL+ ++IN RLD V+ F +T LR D+R HL R+ DIERL + + + +V L +
Sbjct: 318 PLISTSDINKRLDAVEEFTHNTLLRYDIRSHLSRVRDIERLTGRIVYGNSNARDLVALKK 377
Query: 400 SSIRLPYIRSALQQYEGQ-FSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ---- 454
S +P IRS ++ + + SL + Y D L I L++ + +D+
Sbjct: 378 SLEAVPEIRSLQKEMDSEMIVSLTGQLY--------DFSQLESLIDLIDCGI-VDEPPVS 428
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+ +G +I S Y T L ++ + I S K+ + K+LK+ FG+
Sbjct: 429 VRDGG-LIKSGYSTELDEIRGMSRHGKEWIASFQKRERERTGI---KSLKVGYNKVFGYY 484
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
+TK ++ + +I+ +T + +F +LKK + E+ + EL +
Sbjct: 485 IEVTKANSSQVPE----DYIIKQTMANSERFYTPELKKWEEAIISADEKITTLEYELFSE 540
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
+ +S+ + A ++ ++DVL + A++A + YTRP + I++ RHP
Sbjct: 541 INSKISDYSKQLQKTADVIGKMDVLSNLAEIAVN--RNYTRPAVTAD--CRILVRDGRHP 596
Query: 635 CVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE+ F+PND ++ K+ F +ITGPNM GKST++RQV + ++MAQ GSFVP A
Sbjct: 597 VVESSVPGGFVPNDTEMDCSKNQFALITGPNMAGKSTYMRQVALIVIMAQAGSFVPASHA 656
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
SI + D IF RVGA D G STFM EM+E A+IL AT +SLI++DE+GRGTSTYDG+
Sbjct: 657 SIGLVDRIFTRVGAFDDLASGQSTFMVEMVELANILNNATPKSLILLDEIGRGTSTYDGY 716
Query: 755 GLAWAICEHLVEEIRAP--TLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
+A A+ E++ + RA ++FATH+H+LT L ++++ V NYH++ +
Sbjct: 717 SIAKAVVEYIHNKDRAGVRSMFATHYHQLTDL---------SERLERVNNYHIA--VREE 765
Query: 813 SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIE 872
L L K+ PGA D+S+GIHVA A P V A+E +E+ + S D+A +
Sbjct: 766 GDDLVFLRKIIPGATDKSYGIHVARLAGVPRRVTQRAKEILEGIENES-SLGEKDNATRK 824
Query: 873 VGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+ I D + SR +M L+ M EAL + +K++L
Sbjct: 825 RSGYTQLIFDIDRSSRKPQMYDPVADRIRNMNLDEMTPLEALNTLNEIKNEL 876
>gi|294868772|ref|XP_002765687.1| DNA mismatch repair protein MSH2, putative [Perkinsus marinus ATCC
50983]
gi|239865766|gb|EEQ98404.1| DNA mismatch repair protein MSH2, putative [Perkinsus marinus ATCC
50983]
Length = 792
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 212/644 (32%), Positives = 330/644 (51%), Gaps = 57/644 (8%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA--NK 312
++A A+ L S +L + S Y + + D+++RLD AA+ AL+VL S T
Sbjct: 137 DLASLAMMTLASALKLACESSFYRKCSLSQLKCDAFLRLDQAALTALHVLPSTTSGVGQS 196
Query: 313 NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL-RQHL 371
SL GL+ + + G+R + W + PL+++ EI R DIV + ALR L R+HL
Sbjct: 197 GKSLVGLLGASIRSKGGQRRILQWARNPLVEIKEIRKRHDIVGYLLHCDALRNSLLRRHL 256
Query: 372 KRISDIERL---MHNLEKRRA------GLQQIVKLYQSSIRLPYIRSALQQYEG---QFS 419
K I D++RL M + R+ L+++V+LY+ I +Q +
Sbjct: 257 KTIPDLDRLRMKMVQVASRQGWGHEKISLEELVRLYECLASAQDIAFEIQNTPAPTPEAQ 316
Query: 420 SLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQL-ENGEYMISSSYDTGLSALKNEQE 478
++E+++ P+ + ++F+ L+E VD + + + E+ I S L L ++
Sbjct: 317 EAVEEQFVKPMNACVHS--CDRFMDLMEKCVDFEAIARDREFRIRSGITPQLEELAGHRD 374
Query: 479 SLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLET 538
+ ++ + ++ + + +A + R+ KK++ + K T + ++
Sbjct: 375 AAREEMEVIKQEVSRKIK---TEARLAEAAAPHYWCLRVPKKQQASVEK--TRAYKKVQI 429
Query: 539 RKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDV 598
K FT L+ ++ Y +++ R ++ A T+ LA +L+ LDV
Sbjct: 430 NKAEFLFTCGPLELAVSRFMDAQSRYNEAARDIQKRTVEVAATYHPAVARLADVLASLDV 489
Query: 599 LLSFADLASSCPTPYTRPDIN---PPDVGDIILEGSRHPCVEAQDWVN-----------F 644
L SFA A + R +I+ PP DI EG+RH VE + +N F
Sbjct: 490 LCSFACCALT--HRMVRAEIDDATPPVCIDI--EGARHVLVE-EARINGDIKMDDAMGEF 544
Query: 645 IPNDCKLIR--------GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
+PND K+ R +ITGPNMGGKST+IR + + + Q+GSFVP RA +
Sbjct: 545 VPNDVKMQREGTGHMNGNDGRVMVITGPNMGGKSTYIRTAALCVFLNQIGSFVPAQRARL 604
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
+ I RVGA D Q+RGVSTFM EML+ ASI++ A + SL+IIDELGRGTST DGFGL
Sbjct: 605 GIFRSIMCRVGASDYQIRGVSTFMAEMLDAASIIQSADEYSLVIIDELGRGTSTEDGFGL 664
Query: 757 AWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
AW I +++ E ++ LFATHFHEL LA + V+N HV+A +D + K+
Sbjct: 665 AWHITKYIAAESKSFVLFATHFHELATLASTFPDGV-------VSNAHVAAAVDEHTGKI 717
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
T LY + PG QS+G++VA A FPE VV A +A+ L T
Sbjct: 718 TFLYSIRPGPTTQSYGMNVARLAGFPEDVVMSAEARASGLSTVT 761
>gi|319789352|ref|YP_004150985.1| DNA mismatch repair protein MutS [Thermovibrio ammonificans HB-1]
gi|317113854|gb|ADU96344.1| DNA mismatch repair protein MutS [Thermovibrio ammonificans HB-1]
Length = 860
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 230/663 (34%), Positives = 341/663 (51%), Gaps = 63/663 (9%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
R+Y+ + Y+ +D R L + E + +LF +NRT T GMG+RLL W+ PL
Sbjct: 236 RRYTGERYVYIDPYTQRNLELTEPLVENLSRDTLFSTLNRTKT-GMGRRLLKFWILHPLR 294
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGL---QQIVKLYQ 399
V+EIN RLD V + L +L + L + D+ERL+ K AG+ +++ L
Sbjct: 295 SVSEINRRLDAVGELKESFLLADELSELLSGVYDVERLVT---KATAGIINPKEMASLRA 351
Query: 400 SSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGE 459
S LP I+ L+ + + S + + T DD + + L VD L E
Sbjct: 352 SLKALPKIKKLLESFSSELLSQL---------ASTFDDLYDIYCELERVLVDSPPLSPKE 402
Query: 460 Y-MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I L L+ +E+ E+ I + ++ + ++LK+ FG+ ++
Sbjct: 403 GGLIRKGVHPELDELRRIKENAEQIIREIEERERKRTGI---QSLKVGFNNVFGYYIEVS 459
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K P + + + +I +T + +F +LK+ ++ E + + EL + +
Sbjct: 460 K---PNLHL-VPSDYIRRQTLVNAERFITPELKEFEEKVLSAQERIEKIEYELFKELRRF 515
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ A L+ +DVLLSFA +A YTRP++ D ++ + RHP +E
Sbjct: 516 ISDRASRIVETAEKLATIDVLLSFAKVARDFN--YTRPEVG--DFYEVEIVQGRHPVLER 571
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
FIPND L R + +F +ITGPNMGGKS F+RQ + + MAQ+GSFVP + A I V
Sbjct: 572 SLQEEFIPNDTTLNR-EQFFLLITGPNMGGKSVFLRQTALIVAMAQMGSFVPAESARIGV 630
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF RVGA D RG+STFM EM+ETA+ILK AT++SLII+DE+GRGTSTYDG +A
Sbjct: 631 VDRIFTRVGASDSLSRGLSTFMMEMVETANILKNATEKSLIILDEIGRGTSTYDGMSIAR 690
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
A+ E++ I A TLFATH+HELT L Q+ GV NYHV + K+
Sbjct: 691 AVVEYICNRIGAKTLFATHYHELTELEG---------QVRGVKNYHVC--VKEVDGKVVF 739
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--------DFTPSAVISDDAK 870
++V+PG ++S+GIHVAE A PE VV ARE LE T SA S+
Sbjct: 740 THRVKPGPSEKSYGIHVAELAGLPEEVVERAREILKSLESGGRKGSKSLTYSAGSSELPL 799
Query: 871 IEVGSKRKRI-SDPNDMSRGAARAHQFLKEFSDM------PLETM----DLKEALERVKR 919
++V KR S PN + L+E + + PLE + LKEA++ +K
Sbjct: 800 LQVAQKRVEYGSGPNL----EPEVEKILREIAQVEISTTTPLEALMLLAKLKEAVKSLKT 855
Query: 920 MKD 922
K+
Sbjct: 856 FKE 858
>gi|410671188|ref|YP_006923559.1| DNA mismatch repair protein [Methanolobus psychrophilus R15]
gi|409170316|gb|AFV24191.1| DNA mismatch repair protein [Methanolobus psychrophilus R15]
Length = 887
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 240/807 (29%), Positives = 403/807 (49%), Gaps = 60/807 (7%)
Query: 143 ALFPNFREN--------GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECL 194
++FP+ N G G+ ++D++ + D S + + S +G EC+
Sbjct: 118 SMFPDASNNYLMALYGEGKDFGIAFLDISTGEFLTTQLADSSPYDRIASEAARMGPSECI 177
Query: 195 LPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQD-LDRLVRG--SVEPVRDL- 250
+P + + L + + +++ + ++ F V D D+++R V + +
Sbjct: 178 MPAAMLADEK---LVERIRELKIIIHKYEEDAF-----VHDSADKVLREHFKVSTLEGMG 229
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
SG A + GA L YA +++ Y +M LD+ +R L ++++
Sbjct: 230 CSGLPFAVSSAGAALQYAIDTQMRELSQVQHLKTYFDSEFMVLDAITLRNLEIVKNVRGE 289
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+ +L +++ T T MG RLL WL +PL+ V++IN RLD V + +T +R DLR H
Sbjct: 290 GSDSTLLNVLDETRTP-MGGRLLQKWLLKPLVSVDDINYRLDAVSQLLGNTLVRFDLRSH 348
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L + D+ERL+ + + + +V L +S +P I +++ G S + + + L
Sbjct: 349 LSYVKDMERLVGRVLYGNSNARDLVALRRSMEAVPQIVDSMR---GCGKSELLDDIVSQL 405
Query: 431 ESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
S T+ + L + I + +G MI S Y+ L L+ +S + I ++
Sbjct: 406 SSFTELEELTELIGRAIVDEPPVSVRDGG-MIKSGYNERLDELRGLSKSGKHWIAEFQQK 464
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+ D K+LK+ FG+ ITK ++ +I +T + +F +L
Sbjct: 465 ---ERDRTGIKSLKVGYNKVFGYYLEITKANISQV----PDDYIRKQTMTNAERFYTPQL 517
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
K+ E+ + EL+ V + S+ + A + LDVL +FA++A++
Sbjct: 518 KERESDILSADEKMVALEYELLCEVNAVVASHSKQLQDTAATIGMLDVLANFAEVAAN-- 575
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
Y RP I D +I +G RHP VE+ F+PND + + F +ITGPNM GKS
Sbjct: 576 NNYIRPGITN-DCKLLIRDG-RHPVVESAVRGGFVPNDTDMDCQNNQFMLITGPNMAGKS 633
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQ+ + ++MAQ GSFVP ASI + D +F RVGA D G STFM EM+E A+IL
Sbjct: 634 TYMRQIAMIVIMAQAGSFVPVSHASIGIVDRVFTRVGAFDDLASGQSTFMVEMVELANIL 693
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP--TLFATHFHELTALAHEN 788
AT RSL+++DE+GRGTSTYDG+ +A A+ E++ + R +LFATH+H+LT +A
Sbjct: 694 NNATPRSLVLLDEIGRGTSTYDGYSIAKAVVEYIHSKGRVGVRSLFATHYHQLTEIAG-- 751
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
N K+ V N+H++ + L L K+ PGA D+S+GIHVA A P SV
Sbjct: 752 ----NLKR---VKNFHIA--VKEEGDDLVFLRKIVPGATDKSYGIHVARIAGVPLSVTKR 802
Query: 849 AREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDM-------SRGAARAHQFLKEFS 901
ARE ++E+ SA+ +D K G K + + + S ++ H ++E
Sbjct: 803 AREILEDIEN--ESAISMNDTK--AGKKHRNNAKYTQLILFDQATSEKESKPHPVVEELR 858
Query: 902 DMPLETMDLKEALERVKRMKDDLEKDA 928
+M + ++ EAL ++ ++K L ++
Sbjct: 859 EMDVNSLTPLEALNKLSQIKSRLSGES 885
>gi|420155624|ref|ZP_14662482.1| DNA mismatch repair protein MutS [Clostridium sp. MSTE9]
gi|394758853|gb|EJF41689.1| DNA mismatch repair protein MutS [Clostridium sp. MSTE9]
Length = 871
Score = 311 bits (798), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 218/620 (35%), Positives = 325/620 (52%), Gaps = 46/620 (7%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
VS + + A+G LL Y + I YS +M LD +A R L +LE+
Sbjct: 231 VSAYPLTAQAVGCLLLYLKKTQRTGLERMDTIEMYSGSQFMGLDLSARRNLELLETMRGK 290
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+K SL ++++T TA MGKRL+ +W+++PLL+ +I R + V+ D+ R + +
Sbjct: 291 SKRGSLLWVLDKTKTA-MGKRLIRVWIERPLLNPAQILRRQNAVEELSMDSMFRDAVAEQ 349
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE--RYLD 428
L I D+ERLM + A +++ L + RLP ++ L G S+L++E +D
Sbjct: 350 LSGIHDLERLMTRIVYGSANARELRSLCAALSRLPELKQLLG---GVSSALLREIREKID 406
Query: 429 PLESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
PLE + AL+E+++ E G MI Y L L+ + S + I
Sbjct: 407 PLEDVA---------ALIESAIVDEPPFSIREGG--MIRPGYHEELDELRTDMGSGKEII 455
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
L +P LK+ FG+ ++ R K+ ++I +T + +
Sbjct: 456 AQLEAGEREKTGIP---KLKVGYNRVFGYYIEVSNS----YRDKVPDEYIRKQTLTNCER 508
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
F LK+L + E+ + +L +V A + E ++ A+ +++LDVL SFA
Sbjct: 509 FITPDLKQLEGRILGAHEKSVQLETQLFEQVRAEAASQLERVQATASAVAQLDVLTSFA- 567
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITG 663
A S Y RP++N G IIL+ SRHP VE D F+PND +L + ++ IITG
Sbjct: 568 -AVSVANSYQRPEVNLS--GKIILKESRHPVVEQMLDGAPFVPNDVELDQEENRVAIITG 624
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST++RQ+ + +LMAQ+G FVP A I V D IF RVGA D G STFM EM
Sbjct: 625 PNMAGKSTYMRQIALIVLMAQIGCFVPAQSAEIGVVDAIFTRVGASDDMASGQSTFMVEM 684
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHEL 781
E A ILK AT RSL+I+DE+GRGTST+DG +A A+ EH+ ++ + A LFATH+HEL
Sbjct: 685 TEVADILKNATSRSLLILDEIGRGTSTFDGMSIARAVLEHVADKHSLGAKALFATHYHEL 744
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T L + + GV N++++ + +T L ++ G D SFGI VA+ A
Sbjct: 745 TVL---------EELVSGVKNFNIA--VKKRGDDITFLRRIVRGGADDSFGIEVAKLAGV 793
Query: 842 PESVVTLAREKAAELEDFTP 861
P SVV A++ ELE P
Sbjct: 794 PNSVVNRAKQVLRELESGRP 813
>gi|91773655|ref|YP_566347.1| DNA mismatch repair protein MutS [Methanococcoides burtonii DSM
6242]
gi|121691668|sp|Q12VC9.1|MUTS_METBU RecName: Full=DNA mismatch repair protein MutS
gi|91712670|gb|ABE52597.1| DNA mismatch repair protein MutS [Methanococcoides burtonii DSM
6242]
Length = 887
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 240/789 (30%), Positives = 393/789 (49%), Gaps = 59/789 (7%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
G+ ++D++ +F D S + + S + EC++ + + S E L + L
Sbjct: 139 GVSFLDVSTGEFLTTQFADKSPYDRIASEAARMRPSECII-SRTMFSDE--RLVERLKEL 195
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL-VSGFEIAPGALGALLSYAELLSDE 274
V++ K F + L+R +V + + +G A + GA L YA L +
Sbjct: 196 NVLVQGFKDEAFDVDSSRKLLER--HFNVSTLEGMGCAGLPYATSSAGAALDYA-LTTQM 252
Query: 275 SNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
G+ + YS +M LDS +R L ++++ + S+ +++ T T MG RLL
Sbjct: 253 RELGHVSELSTYSDSEFMMLDSITLRNLEIVKNVRGEGNDTSILKVLDDTNTP-MGGRLL 311
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
WL +PL++V+ I+ RLD ++ +DT LR D+R HL + DIERL+ + + +
Sbjct: 312 QKWLLKPLINVDSIDHRLDALECLANDTMLRFDVRSHLSFVKDIERLIGRVVYGNSNARD 371
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV--- 450
++ L +S +P I ++ G E ++ + L + L + L++ ++
Sbjct: 372 LIALKRSLGSVPQIVESMGDDPGC------EMLINIRDGLLGFEQLENIVKLIDDAIVDE 425
Query: 451 -DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
+ E G MI S Y+ L LK + I S ++ + D K+LK+
Sbjct: 426 PPVSVREGG--MIRSGYNEKLDELKGMSTGGKTWIASFQQK---ERDRTGIKSLKVGYNR 480
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
FG+ ITK +I +I +T ++ +F +LK+ D E+ +
Sbjct: 481 VFGYYIEITKSNIAQI----PDDYIRKQTMRNAERFYTPELKEWEDVILSADEKITALEN 536
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL + + + + +A ++ +LD S A++A + + RP+I D +I E
Sbjct: 537 ELFTEITSRIASHASDLQRIAVLIGQLDCTASLAEVAVN--NNFVRPNITS-DCKILIRE 593
Query: 630 GSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
G RHP VE F+PND ++ F +ITGPNM GKST++RQV + ++MAQ GSFV
Sbjct: 594 G-RHPVVEKTVRGGFVPNDTEMDCVDEQFLLITGPNMAGKSTYMRQVSLIVIMAQAGSFV 652
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
P ASI + D +F RVGA D G STFM EM+E A+IL AT +SL+++DE+GRGTS
Sbjct: 653 PASHASIGIVDRVFTRVGAFDDLASGQSTFMVEMVELANILNNATPKSLVLLDEIGRGTS 712
Query: 750 TYDGFGLAWAICEHLVEEIRAP--TLFATHFHELTALAHENANEFNTKQMVGVANYHVSA 807
TYDG+ +A A+ E++ + R +LFATH+H+LT + + + V NYH++
Sbjct: 713 TYDGYSIAKAVVEYIHNKGRVGVRSLFATHYHQLTNI---------SSSLKRVKNYHIAV 763
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
D L L K+ PGA D+S+GIHVA A P V A+E ++ED +VIS
Sbjct: 764 KEDGDD--LVFLRKIVPGATDKSYGIHVARLAGVPHKVTQRAKEVLQDIED---ESVISK 818
Query: 868 DAKIEVGSKRKR-------ISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRM 920
++ + G K+K + DP S A ++E ++ + +M EAL ++
Sbjct: 819 ESDSKRGRKKKSAQYTQLMLFDPEGSSAPVAEPDPVVEELKELDVNSMTPIEALNKLS-- 876
Query: 921 KDDLEKDAG 929
+L+K AG
Sbjct: 877 --ELQKKAG 883
>gi|442804336|ref|YP_007372485.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740186|gb|AGC67875.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 870
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 219/638 (34%), Positives = 331/638 (51%), Gaps = 51/638 (7%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E A A GAL+ Y ++ I+KY +++YM +DS++ R L + E+ D K
Sbjct: 230 EFALCASGALIGYLKVTQKVDLNHIKEIQKYKIENYMIIDSSSRRNLELTETLRDRKKRG 289
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
+L +++RT TA MG RLL W++QPLLDV+EIN RLD V+ D +R +LR+ LK++
Sbjct: 290 TLLWVLDRTMTA-MGGRLLRKWIEQPLLDVDEINRRLDAVEELKDKFMIRSELRELLKKV 348
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
D+ERL L + ++ L S ++P I + + + I++
Sbjct: 349 YDMERLASKLVVGNVNARDLLALKASMGQIPSILDLMSDLKTELCVGIRDEI-------- 400
Query: 435 DDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
DH+N L++ S+ D +++G +I Y + + ++ I L
Sbjct: 401 --DHMNDIYELIDKSIAEDPPVTIKDGG-IIRDGYSEDVDTYRKAFTEGKQWIADLE--- 454
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
A + +L K LK+ FG+ +TK ++ ++I +T +G +F +LK
Sbjct: 455 AKERELTGIKNLKVRYNKVFGYYIEVTKANLSQV----PDRYIRKQTLVNGERFITEELK 510
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
KL D E+ KN + EL + + + A L++LDVL S A++A
Sbjct: 511 KLEDTILGAEEKVKNLEYELFCEIREKIAAEVHRIQRTADRLAQLDVLCSLAEVADR--E 568
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
Y +P ++ + +I ++ RHP VE F+PND L IITGPNM GKS
Sbjct: 569 NYVKPVVH--EGSEIDIKDGRHPVVEKVLGSSPFVPNDAYLNDDTDRVIIITGPNMAGKS 626
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQV + +LMAQ+GSFVP +A+I + D IF RVGA D G STFM EM E A+IL
Sbjct: 627 TYLRQVALIVLMAQMGSFVPASKATIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANIL 686
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHFHELTALAHEN 788
AT RSL+I+DE+GRGTST+DG +AW++ E++ ++ R TLFATH+HELT L
Sbjct: 687 NNATPRSLLILDEIGRGTSTHDGLAIAWSVIEYINDKSRLGCRTLFATHYHELTELED-- 744
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
++ G+ N + + ++ L K+ PG DQS+GI VA A PE V+
Sbjct: 745 -------KLTGIKNCCI--EVKKRGDEIIFLRKIIPGGADQSYGIEVAGLAGVPELVIER 795
Query: 849 AREKAAELEDFTPSAVISDDAKIEVGSK-RKRISDPND 885
A+ EL D A I G K RK+ + P D
Sbjct: 796 AKHILNEL----------DAADINKGGKARKKSTKPVD 823
>gi|223998478|ref|XP_002288912.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976020|gb|EED94348.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 338
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/347 (47%), Positives = 219/347 (63%), Gaps = 40/347 (11%)
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
V F+ +L++LG + + ++ EY+ Q+++V + + A ++ + + + LSELDVL SF
Sbjct: 1 VYFSTKELEQLGTKKKDLMMEYEEKQRDIVCKAMVVAASYVPVLERASMTLSELDVLASF 60
Query: 603 ADLASSCPTPYTRPDINPPD------------------------------VGDIILEGSR 632
A +A+ Y RP++ + V L G+R
Sbjct: 61 AYVAAYSSNGYCRPEMTDGEEDGLGIEVSYSSTERCDSSLWFSKHNISFLVNTFQLTGAR 120
Query: 633 HPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
HPCVE QD +NFI ND L+ G S F ++TGPNMGGKST+IR +G I +AQ+GSFVPC
Sbjct: 121 HPCVELQDDMNFIANDFNLVFGASSFLLVTGPNMGGKSTYIRSLGAIITLAQIGSFVPCT 180
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
A I++ D I ARVGAGD Q RG+STFM EMLE +SIL+ +T RSLIIIDELGRGTST+D
Sbjct: 181 SAKINIVDHILARVGAGDAQDRGISTFMAEMLEASSILRTSTKRSLIIIDELGRGTSTFD 240
Query: 753 GFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
GFGLA AI EH+V++I T+FATHFHELTAL + A+ V N HVSAH D
Sbjct: 241 GFGLAKAISEHVVQKIGCMTVFATHFHELTALEEQEAS---------VTNCHVSAHSDK- 290
Query: 813 SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
LT LY+V PG C +SFGI VAE AN P +++T A+ KA +LE+F
Sbjct: 291 QNGLTFLYEVRPGPCLESFGIQVAEMANMPSNIITDAKRKAKQLENF 337
>gi|302391923|ref|YP_003827743.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM
5501]
gi|302204000|gb|ADL12678.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM
5501]
Length = 893
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 220/659 (33%), Positives = 355/659 (53%), Gaps = 60/659 (9%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
YS YM LD+ R L + ++ D + SL ++++T TA MG R L WL+QPLLDV
Sbjct: 264 YSTKDYMTLDANTRRNLELTKTIRDQSYKGSLLWVLDQTVTA-MGGRKLQKWLEQPLLDV 322
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
IN RLD V D+ L+++L+ +L + D+ERLM + A + ++ L S L
Sbjct: 323 EGINNRLDAVGELKDNIFLKEELKDNLTEVYDLERLMSKITYGSANARDLIALKTSIANL 382
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P I+ L Q+E SS +K D L++L +D H L+E+S+ + + G+ +
Sbjct: 383 PAIKELLTQFE---SSKLKSA-ADKLDTL-EDVH-----ELIESSIKEEPPTTVTEGD-I 431
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I + YD L + + I +L K+ + K+LK+ G+ +TK
Sbjct: 432 IKTGYDEELDEFRQAMNEGKDWIANLEKEEKERTGI---KSLKVGFNKVHGYYIEVTKAN 488
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRVI 576
+ + +T + ++ +LK+ LG + + V EY+ L +
Sbjct: 489 LDLVPDNYERK----QTLSNSERYITPELKEKESKILGAEEKSVELEYQ-----LFTEIR 539
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ +E + +A ++++LDVL S A++A Y P++N DV DI E RHP V
Sbjct: 540 EKVAQETERVQKVADIVAQLDVLASLAEVA--INNNYCHPEVNASDVIDI--EDGRHPVV 595
Query: 637 EAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E + +F+PND + + F IITGPNM GKST++RQV + +LM+Q+GSF+P D A
Sbjct: 596 EEMLEEESFVPNDSYIDCDQDRFLIITGPNMSGKSTYMRQVALMVLMSQIGSFIPADEAK 655
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
I + D IF RVGA D G STFM EM E A+IL AT SL+I+DE+GRGTSTYDG
Sbjct: 656 IGIVDRIFTRVGASDDLTTGQSTFMVEMNEVANILNNATQNSLVILDEVGRGTSTYDGLS 715
Query: 756 LAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
+AWA+ E++ ++ I A +LFATH+HELT L ++ GV NY+V+ +
Sbjct: 716 IAWAVTEYISDQSNIGAKSLFATHYHELTELE---------SKLPGVKNYNVA--VKEEG 764
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE------DFTPSAVISD 867
+T L K+ PG + S+GI VA+ A P+SV+ A E +LE + +++ S+
Sbjct: 765 SDITFLRKIVPGKANDSYGIEVAKRAGVPKSVIDRANEVLEKLETEIDNYEQINNSLESE 824
Query: 868 ---DAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDD 923
+AK E+ S+ + + N ++ AA+ + +++ ++ + +M EA+ ++ +++ +
Sbjct: 825 KVAEAKAEITSESE-LQQQNQLALFAAQNSELIQKLGELDIMSMTPLEAMNKLHQLQQE 882
>gi|87310334|ref|ZP_01092464.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
gi|87286833|gb|EAQ78737.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
Length = 873
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 252/827 (30%), Positives = 396/827 (47%), Gaps = 78/827 (9%)
Query: 118 TPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSH 177
TPG L +D L E + P +E +G+ +V+++ F
Sbjct: 107 TPGTL--TDDALLEPRESNYLAAVA--LPGKKETAAEVGVAWVEMST-----GRFFSGVF 157
Query: 178 FT-NVESALVALGCKECLLPTEA------VKSSECKTLRDALTRCGVMLTERKKTEFKTR 230
T + L + ECL+P E+ + S T R A E K F+T
Sbjct: 158 PTARLADQLARIAPSECLVPEESNVVPTHLHESILMTYRPAWAFGKEGAGEVLKRHFETM 217
Query: 231 DLVQDLDRLVRGSVEPVRDLVSGF------EIAPGALGALLSYAELLSDESNYGNYYIRK 284
L GF ++A A GA+L Y E S +
Sbjct: 218 TL-------------------EGFGFGDQDQLAVCAAGAVLEYLEETQRTSLLHIERLTP 258
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y S + +D A R+L + + D ++ SL ++R C MG RLL WL PL D+
Sbjct: 259 YRASSTLEIDEATRRSLELTRTMRDGRRDGSLLAAIDR-CVTVMGSRLLGDWLSNPLTDL 317
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
EI+ RLD V+ V + AL +DLR+ LK + D+ERL+ + RA + + + ++ RL
Sbjct: 318 EEIHRRLDGVEELVLEPALARDLRESLKEVYDLERLLARVMTGRASPRDLGYICKTLERL 377
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P+I++ + L++ER E + + ++ S+ L + G +I +
Sbjct: 378 PHIKAKITSRRSSMLRLLEERLDLCSEIRS------QLAEALDDSLPLSPRDGG--VICT 429
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
++ L L+ ++ I KQ + LK+ FG+ +T
Sbjct: 430 GFNADLDHLRGLAAGGKQWIAEYQKQEIERTGI---ANLKVGFNKVFGYYLEVTNVN--- 483
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
R+++ T +I +T K+ ++ +LK+ ++ E+ K+ + EL ++ ++
Sbjct: 484 -RERIPTDYIRKQTLKNAERYITPELKEYEEKVLSADEKAKDLEYELFGQLRDAVQLDAK 542
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN- 643
+ A +L+ LD LLS A+LA Y RP + V I L+G RHP ++ ++
Sbjct: 543 RIQQTADVLANLDCLLSLAELARE--RNYCRPQVGESAVLRI-LDG-RHPVLDLKEIEGG 598
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
F+PND +L + +ITGPNM GKST+IRQV + LMAQ+GSFVP A + + D IF
Sbjct: 599 FVPNDAQLDSESGFIGLITGPNMAGKSTYIRQVALISLMAQMGSFVPAREADLGIVDRIF 658
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
ARVGA D RG STFM EM ETA IL AT+RSL+I+DE+GRGTSTYDG LAW+I E+
Sbjct: 659 ARVGASDELSRGQSTFMVEMTETARILNTATNRSLVILDEIGRGTSTYDGVSLAWSIVEY 718
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
L ++I TLFATH+HELT L + GV N +V+ + K+ L+K+
Sbjct: 719 LHDKIGCRTLFATHYHELTDL---------RSSLPGVVNLNVA--VKEWDDKVIFLHKIV 767
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
PGA D+S+GI+VA A P V A++ +LE S + ++ SK++R
Sbjct: 768 PGAADKSYGIYVARLAGVPREVNERAKQILNQLE----SEHLDSGGNAKIASKKERRPKT 823
Query: 884 N-DMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAG 929
+ +S H L++ ++ ++ +AL+ ++ K DL +
Sbjct: 824 DLQLSLFGPHEHPLLEKLREVDVDETTPLQALQLLQAWKKDLHDEGA 870
>gi|344996159|ref|YP_004798502.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964378|gb|AEM73525.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
Length = 863
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 221/616 (35%), Positives = 334/616 (54%), Gaps = 62/616 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL Y L + YIR+ Y + +Y+++D R L + ES +K SL
Sbjct: 223 SVGNLLKY---LIETQKISFDYIRRFEFYRVQNYLQIDINTKRNLELTESIIQRSKKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G+++RT T+ MG RLL W+++PL+DV EIN RLD V+ + ++ + + L R+ D
Sbjct: 280 LGILDRTKTS-MGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQIEELLSRMYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLT 434
IERL + + ++ L +S LP ++ L + Q L+KE Y LD LE +
Sbjct: 339 IERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQ---LLKEIYEGLDTLEDIY 395
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQ 490
AL+++S++ D L+ G +I ++ + L+N + S E + K+
Sbjct: 396 ---------ALIDSSINEDAPVTLKEGG-IIKDGFNEEVDRLRNISKNSKELLVQYEEKE 445
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+L K L++ FG+ +TK + ++I +T + ++ +L
Sbjct: 446 R----NLTGIKNLRIGYNKVFGYYIEVTKSNYSLV----PDRYIRKQTLANAERYITEEL 497
Query: 551 KKLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
KKL D+ QK++E E+ +R I+ + E + A+ ++ LDVL SFA +A
Sbjct: 498 KKLEDEILGADQKLIELEYQLFCEIRDR-IEAQI---ERIQKTASYIAILDVLCSFARIA 553
Query: 607 SSCPTPYTRPDINPPDVGD-IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
Y RP++ +GD I ++ RHP VE NFIPND +L + ++ IITGP
Sbjct: 554 --IDNEYVRPNVC---LGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGP 608
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + ++MAQ+G FVP D A I + D IF+R+GA D G STFM EM
Sbjct: 609 NMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMS 668
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELT 782
E A+ILK AT +SLII DE+GRGTSTYDG +AWA+ E++ + +I A TLFATH+HELT
Sbjct: 669 EVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELT 728
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ GV NY V + + + L K+ G CD S+GIHVA A P
Sbjct: 729 ELEE---------RIPGVKNYRVD--VKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIP 777
Query: 843 ESVVTLAREKAAELED 858
E V+ A E +LE+
Sbjct: 778 EEVLKRAGEILKQLEE 793
>gi|222529489|ref|YP_002573371.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
gi|254766611|sp|B9MJU0.1|MUTS_ANATD RecName: Full=DNA mismatch repair protein MutS
gi|222456336|gb|ACM60598.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
Length = 863
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 335/616 (54%), Gaps = 62/616 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL Y L++ YIR+ Y + +Y+++D R L + ES ++ SL
Sbjct: 223 SVGNLLKY---LTETQKISFDYIRRFEFYRVQNYLQIDINTKRNLELTESIIQRSRKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G++++T T+ MG RLL W+++PL+D+ EIN RLD V+ + + + + L R+ D
Sbjct: 280 LGILDQTKTS-MGSRLLKKWIERPLIDIIEINKRLDSVEELKSNYSTLVQVEELLSRMYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLT 434
IERL + + ++ L +S LP ++ L ++ S L+KE Y LD LE +
Sbjct: 339 IERLSSKFAYKNVNAKDLLSLKKSIEVLPTLKQFLSSFD---SELLKEIYEGLDTLEDIY 395
Query: 435 DDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQ 490
AL+++S++ D L+ G +I ++ + L+N + S E + K+
Sbjct: 396 ---------ALIDSSINEDAPVSLKEGG-IIKEGFNEEVDRLRNISKNSKELLVEYEEKE 445
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+L K L++ FG+ +TK + ++I +T + ++ +L
Sbjct: 446 R----NLTGIKNLRIGYNKVFGYYIEVTKSNYSLV----PDRYIRKQTLANAERYITEEL 497
Query: 551 KKLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
KKL D+ QK++E E+ +R I+ + E + A+ ++ LDVL SFA +A
Sbjct: 498 KKLEDEILGADQKLIELEYQLFCEIRDR-IEAQI---ERIQKTASNIANLDVLCSFARIA 553
Query: 607 SSCPTPYTRPDINPPDVGD-IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
Y RP++ +GD I ++ RHP VE NFIPND +L + ++ IITGP
Sbjct: 554 --IDNEYVRPNVY---LGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGP 608
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + ++MAQ+G FVP D A I V D IF+R+GA D G STFM EM
Sbjct: 609 NMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGVVDKIFSRIGASDDISSGQSTFMVEMS 668
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELT 782
E A+ILK AT +SLII DE+GRGTSTYDG +AWA+ E++ + +I A TLFATH+HELT
Sbjct: 669 EVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELT 728
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ GV NY V + + + L K+ G CD S+GIHVA A P
Sbjct: 729 ELEE---------RIPGVKNYRVD--VKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIP 777
Query: 843 ESVVTLAREKAAELED 858
E V+ A E +LE+
Sbjct: 778 EEVLKRAEEILKQLEE 793
>gi|337287987|ref|YP_004627459.1| DNA mismatch repair protein mutS [Thermodesulfobacterium sp. OPB45]
gi|334901725|gb|AEH22531.1| DNA mismatch repair protein mutS [Thermodesulfobacterium geofontis
OPF15]
Length = 865
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 210/607 (34%), Positives = 328/607 (54%), Gaps = 35/607 (5%)
Query: 253 GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANK 312
G + A L L Y L D+ + +Y + ++ LD + R L ++ + D ++
Sbjct: 227 GLKAANAILEYLKIYQPYLVDKISAPQFYYP----EEFLFLDESTKRNLELIRNLWDGSE 282
Query: 313 NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLK 372
+SLF ++++T T MG RLL W+ PL D+ +I R ++V+ FV++ LR++L++ L+
Sbjct: 283 KYSLFWVLDKTQTP-MGARLLKEWILYPLKDIKKIQERQEVVKFFVENKTLREELKKILR 341
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLES 432
+ISD+ERL + A +++ L +S LP I+ L++ F E L +E
Sbjct: 342 KISDLERLSTRCALKLANPKEMGLLRESLKYLPEIKDILEKENPLFFPKKLEELLKAIED 401
Query: 433 LTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
++ + LN + LVE + E G +I L L + +E+ + L K+
Sbjct: 402 FSELYELLNAW--LVEDPPTTLK-EGG--IIKKGVSQELDELLDLKENAVYYLSELEKRE 456
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+P L++ FG+ F ++K K++ F +T + +F +LK
Sbjct: 457 KEKTGIP---NLRIGYNKVFGYYFEVSKS----YLKRVPVYFERKQTLTNVERFVTPELK 509
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
+L ++ E+ +N + EL + + + E K+ A L+ELDV LS A +A
Sbjct: 510 ELENKILSSEEKIRNLEYELFLELREKVALYKEKLKTTAKALAELDVFLSLASVA--IEN 567
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
YT P+I + I+E RHP +E Q F+PN ++ + + I+TGPNMGGKS
Sbjct: 568 DYTMPEITEEPI--FIVEEGRHPVLEQIQGKEKFVPNSLEMNKEDATVLIVTGPNMGGKS 625
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
TF+RQ + +MAQ+GSFVP A + + D IF+R+GAGD ++G STFM EM E A IL
Sbjct: 626 TFLRQNALIAIMAQMGSFVPAKSAKVGIFDKIFSRIGAGDELIKGRSTFMVEMSECAYIL 685
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
K AT +SL+I+DE+GRGTST+DG LAWAI E+L ++ R TL ATH+ ELT LA
Sbjct: 686 KNATSKSLVILDEVGRGTSTFDGMSLAWAIAENLYKK-RVFTLLATHYIELTELA----- 739
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
K G+ NY V+ + + ++ LYKV PG +QS+GI VA+ A P+ VV A+
Sbjct: 740 ----KLYSGIKNYRVT--VKEWNGEVIFLYKVLPGVANQSYGIEVAKLAGIPQEVVDRAK 793
Query: 851 EKAAELE 857
E +LE
Sbjct: 794 EILYKLE 800
>gi|312127451|ref|YP_003992325.1| DNA mismatch repair protein muts [Caldicellulosiruptor
hydrothermalis 108]
gi|311777470|gb|ADQ06956.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
hydrothermalis 108]
Length = 863
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 220/616 (35%), Positives = 334/616 (54%), Gaps = 62/616 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL Y L++ YIR+ Y + +Y+++D R L + ES +K SL
Sbjct: 223 SVGNLLKY---LTETQKISFDYIRRFEFYRVQNYLQIDINTKRNLELTESIIQRSKKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G++++T T+ MG RLL W+++PL+DV EIN RLD V+ + + + + L R+ D
Sbjct: 280 LGILDQTKTS-MGSRLLKKWIERPLIDVIEINRRLDSVEELKSNYSTLVQVEELLSRMYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLT 434
IERL + + ++ L +S LP ++ L + Q L+KE Y LD LE +
Sbjct: 339 IERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQ---LLKEIYEGLDTLEDIY 395
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQ 490
ALV+ S++ D L+ G +I ++ + L+N + S E + K+
Sbjct: 396 ---------ALVDNSINEDAPVTLKEGG-IIKDGFNEEVDRLRNISKNSKELLVQYEEKE 445
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+L K L++ FG+ +TK + ++I +T + ++ +L
Sbjct: 446 R----NLTGIKNLRIGYNKVFGYYIEVTKSNYSLV----PDRYIRKQTLANAERYITEEL 497
Query: 551 KKLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
KKL D+ QK++E E+ +R I+ + E + A+ ++ LDVL SFA +A
Sbjct: 498 KKLEDEILGADQKLIELEYQLFCEIRDR-IEAQI---ERIQKTASYIAILDVLCSFARIA 553
Query: 607 SSCPTPYTRPDINPPDVGD-IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
Y RP++ +GD I ++ RHP VE NFIPND +L + ++ IITGP
Sbjct: 554 --IDNEYVRPNVY---LGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGP 608
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + ++MAQ+G FVP D A I + D IF+R+GA D G STFM EM
Sbjct: 609 NMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMS 668
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELT 782
E A+ILK AT +SLI+ DE+GRGTSTYDG +AWA+ E++ + +I A TLFATH+HELT
Sbjct: 669 EVANILKNATPKSLIVFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELT 728
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L +++ GV NY V + + + L K+ G CD S+GIHVA A P
Sbjct: 729 ELE---------ERIPGVKNYRVD--VKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIP 777
Query: 843 ESVVTLAREKAAELED 858
E V+ A E +LE+
Sbjct: 778 EEVLKRAEEILKQLEE 793
>gi|298676066|ref|YP_003727816.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum
Z-7303]
gi|298289054|gb|ADI75020.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum
Z-7303]
Length = 887
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 230/727 (31%), Positives = 369/727 (50%), Gaps = 48/727 (6%)
Query: 150 ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLR 209
E GL ++D++ + D+ + + S + + EC+LP +SE L
Sbjct: 133 EKNNEFGLSFLDVSTGEFLTTQLSDEPPYDRIASEIARMRPAECILPPYLYNNSEIAQL- 191
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL-VSGFEIAPGALGALLSYA 268
L + L E + F+T L L +V ++ + +A A GA L Y
Sbjct: 192 --LKDMKITLHEYDSSAFETN--TARLQLLQHFNVSTLKGMGCDDLTLAISASGATLQYT 247
Query: 269 ELLSDESNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAG 327
L + G+ + ++ YS +M LDS +R L V++S + ++ +++ T T
Sbjct: 248 -LETQMRELGHVHTLKSYSDSDFMVLDSITLRNLEVIKSVRGEGNDATILKVLDDTKTP- 305
Query: 328 MGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKR 387
MG RLL WL +PL+ +++IN RLD VQ ++T +R DLR +L + D+ERL+ +
Sbjct: 306 MGGRLLQKWLVKPLISIDKINRRLDAVQNLKEETLVRFDLRSYLSYVKDVERLIGRIVYG 365
Query: 388 RAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
+ + +V L +S +P I L+ E S ++KE + + L S T+ L L+E
Sbjct: 366 NSNARDLVALKKSLEVVPDIIGCLK--ECDQSDILKEIH-NELSSFTE---LGDITELIE 419
Query: 448 TSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKAL 503
+ + E G +I Y L LK+ + I S KQ + +L
Sbjct: 420 KGITDEPPATVREGG--LIKPGYSEELDELKDMSRHSKEWIASFQKQERERTGI---NSL 474
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
K+ FG+ +TK P I K + +I +T + +F +LK+ + E+
Sbjct: 475 KVGYNKVFGYYIEVTK---PNI-KYVPDDYIRKQTMANAERFYTPELKERENMIISADEK 530
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
+ + L + + S+ + AT++ +LDVL + A++A + Y RP++ D
Sbjct: 531 IVSLEYNLFTDINSKVASHSKNLQRTATLIGKLDVLANLAEIAVN--NNYVRPEVT--DD 586
Query: 624 GDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
DI + RHP VE + F+ NDC++ + F +ITGPNM GKST++RQ + +MA
Sbjct: 587 CDITIREGRHPVVENKVDSGFVANDCEMNCTDNQFLLITGPNMAGKSTYMRQNSLITIMA 646
Query: 684 QVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDE 743
Q GSFVP ASI + D +F RVGA D G STFM EM+E A+IL AT +SL+++DE
Sbjct: 647 QAGSFVPASYASIGIVDRVFTRVGAFDDLASGQSTFMVEMVELANILNNATPKSLVLLDE 706
Query: 744 LGRGTSTYDGFGLAWAICE--HLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
+GRGTST+DG+ +A A+ E H + + +LFATH+H+LT L + ++ V+
Sbjct: 707 IGRGTSTFDGYSIAKAVVEYIHKKDGVGVRSLFATHYHQLTDLEN---------KLKRVS 757
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP 861
NYH++ + L L K+ PGA D+S+GI VA +A P+ V + ARE L+D
Sbjct: 758 NYHIA--VKEEGDNLVFLRKIVPGATDKSYGIQVARYAGVPKKVTSRAREI---LKDIEK 812
Query: 862 SAVISDD 868
+A I D+
Sbjct: 813 NASIGDE 819
>gi|296132996|ref|YP_003640243.1| DNA mismatch repair protein MutS [Thermincola potens JR]
gi|296031574|gb|ADG82342.1| DNA mismatch repair protein MutS [Thermincola potens JR]
Length = 882
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 248/792 (31%), Positives = 385/792 (48%), Gaps = 64/792 (8%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
GL D++ + E + + L ECL+P VK+ + T + L +
Sbjct: 138 GLAVADVSTGYFAVTELRGAKALNQLIDEISRLQPVECLIPDNLVKNMDLTT--EILKQV 195
Query: 216 GVMLTERKKTEFKTRDLVQDLDR-LVRGSVEPVRDLVSGFEIA-PGALGALLSYAELLSD 273
+ L F ++ L R GS+E L I+ GAL A L AE +
Sbjct: 196 KLSLHSYSSVHFSIKNATSTLLRHFATGSLEGFGCLEMSVGISCAGALMAFL--AETQKN 253
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
+ N I Y+ SYM LD + R L + + D+++ +L +++ T TA MG RLL
Sbjct: 254 SLKHINKLI-PYTTTSYMLLDPSTRRNLELTRTIRDSSRKGTLLWVLDYTQTA-MGGRLL 311
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
WL+QPL D+ I RLD V+ V++ +R DL++ + D+ERL + A +
Sbjct: 312 KTWLEQPLTDITAIETRLDTVEELVNNVFMRGDLQKLFTEVYDLERLAGRIAFGSANARD 371
Query: 394 IVKLYQSSIRLPYIRSALQQ-YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDL 452
++ L +S LP ++ L++ Y L R LD LE + +L+E+++D
Sbjct: 372 LIALKKSLQVLPKVKEILEKAYSPGLIQLY--RQLDILEDVA---------SLIESAIDD 420
Query: 453 D---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
+ L +G +I Y+ + L+ + I L ++ + K+LK+
Sbjct: 421 NPPITLRDGG-IIKKGYNEEIDRLRKASRDGKTWIAELERREKERTGI---KSLKVGYNK 476
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
FG+ +T+ + +I +T + +F LK+ E+ +
Sbjct: 477 VFGYYIEVTRANLDAV----PDDYIRKQTLANAERFITPDLKEYESLILGAEEKITQLEY 532
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL V + + + A+++++LDV ++FA+ ++ YT+P IN D G I +
Sbjct: 533 ELFQAVREKISNSTARIQQAASIVAQLDVYIAFAE--AAIRNNYTKPIIN--DDGIIKIT 588
Query: 630 GSRHPCVEA-QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
RHP VE +F+PND L IITGPNM GKST++RQV + +LMAQ+GS+
Sbjct: 589 DGRHPVVEKFMPEGSFVPNDTYLDCSGYRMDIITGPNMAGKSTYMRQVALIVLMAQIGSY 648
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VP A I + D IF RVGA D G STFM EM E A+IL AT +SLII+DE+GRGT
Sbjct: 649 VPASEARIGIVDRIFTRVGASDDLATGQSTFMVEMNEVANILNNATAKSLIILDEVGRGT 708
Query: 749 STYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
ST+DG +AWA+ E+++ E+I A TLFATH+HELT LA GV N++++
Sbjct: 709 STFDGLSIAWAVAEYILDPEKIGAKTLFATHYHELTELAD---------IYPGVQNHNIA 759
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVIS 866
+ + L K+ PG D+S+GI VA A P V+ A+E LE ++
Sbjct: 760 --VKEKGDDIIFLRKIIPGGADRSYGIQVARLAGLPGEVLGKAKEILRTLE-------VN 810
Query: 867 DDA---KIEVGSKRKRISDPND-----MSRGAARAHQFLKEFSDMPLETMDLKEALERVK 918
+DA K EV + RK+ SD N+ M A KE + L + EAL +
Sbjct: 811 EDAVKTKREVAAARKKCSDGNNVIQLRMFDEPAAGDAVAKEILSLDLLNLTPLEALNYLY 870
Query: 919 RMKDDLEKDAGD 930
+++ L +G+
Sbjct: 871 KLQQKLRSSSGE 882
>gi|399890152|ref|ZP_10776029.1| DNA mismatch repair protein MutS [Clostridium arbusti SL206]
Length = 878
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 313/581 (53%), Gaps = 37/581 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ YS+ YM +D + R L + E+ + +K SL ++++T TA MG R L W++QPL
Sbjct: 251 LNHYSVVDYMSIDVNSRRNLELTETLREKSKKGSLLWVLDKTSTA-MGGRQLRRWIEQPL 309
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D I RLD VQ F ++ ++ +DL+ LK+I DIERL+ + ++++ L S
Sbjct: 310 IDKISIEERLDSVQEFTENISVHEDLKNALKQIYDIERLVGKISTLSVNAKELIFLKNSI 369
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV-DLDQLENGE- 459
+LP ++ L+ + S L+K+ Y T+ D L +++T++ D + E
Sbjct: 370 EKLPKVKEVLKNCK---SDLLKKVY-------TNLDDLKDIYNILDTAISDSPSVSVKEG 419
Query: 460 YMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITK 519
+I Y+ + L+ + + I L + + K+LK+ FG+ ITK
Sbjct: 420 NIIKDGYNNNVDELRQAKSHGKEWIAKLESSEREETSI---KSLKVGYNKVFGYYIEITK 476
Query: 520 KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
+ + ++I +T + ++ +LK++ ++ E+ N + EL +
Sbjct: 477 SNLNMVPE---GKYIRKQTLANCERYITEELKEMEEKILGAEEKLINIEYELFASIRDEI 533
Query: 580 VTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ 639
+ K A +LSELD L SFA +A Y +P N D GDI + RHP VE
Sbjct: 534 SKHIDRMKKSAKLLSELDCLCSFASVA--LEHNYCKP--NVVDSGDIDIHEGRHPVVENM 589
Query: 640 DWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
V F+ ND K+ +ITGPNM GKST++RQV + ++MAQ+GSFVP A IS+
Sbjct: 590 ISVGTFVANDTKINTTDEQLMLITGPNMAGKSTYMRQVALIVIMAQIGSFVPAQDAIISI 649
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF R+GA D G STFM EM E ++ILK AT +SLII+DE+GRGTSTYDG +AW
Sbjct: 650 CDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTYDGLSIAW 709
Query: 759 AICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
++ E++ ++I+ TLFATH+HELT+L + G+ NY ++ + +
Sbjct: 710 SVVEYICTNKDIKCKTLFATHYHELTSLEG---------VINGLKNYSIA--VKQIEDDI 758
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
L K+ PG DQS+GI VA+ A PE V + A+E +LE
Sbjct: 759 VFLRKIVPGGADQSYGIEVAKLAGLPEKVTSRAKEILEDLE 799
>gi|312622277|ref|YP_004023890.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202744|gb|ADQ46071.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kronotskyensis 2002]
Length = 863
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 220/616 (35%), Positives = 334/616 (54%), Gaps = 62/616 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYS---LDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL Y L + YIR+Y + +Y+++D R L + ES ++ SL
Sbjct: 223 SVGNLLKY---LIETQKISFDYIRRYEFYRVQNYLQIDINTKRNLELTESIIQRSRKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G++++T T+ MG RLL W+++PL+DV EIN RLD V+ + ++ + + L R+ D
Sbjct: 280 LGILDQTKTS-MGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQIEELLSRMYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLT 434
IERL + + ++ L +S LP ++ L + Q L+KE Y LD LE +
Sbjct: 339 IERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQ---LLKEIYEGLDTLEDIY 395
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQ 490
AL+++S++ D L+ G +I ++ + L+N + S E + K+
Sbjct: 396 ---------ALIDSSINEDAPVTLKEGG-IIKDGFNEEVDRLRNISKNSKELLVQYEEKE 445
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+L K L++ FG+ +TK + ++I +T + ++ +L
Sbjct: 446 R----NLTGIKNLRIGYNKVFGYYIEVTKSNYSLV----PDRYIRKQTLANAERYITEEL 497
Query: 551 KKLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
KKL D+ QK++E E+ +R I+ + E + A+ ++ LDVL SFA +A
Sbjct: 498 KKLEDEILGADQKLIELEYQLFCEIRDR-IEAQI---ERIQKTASNIAILDVLCSFARIA 553
Query: 607 SSCPTPYTRPDINPPDVGD-IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
Y RP++ +GD I ++ RHP VE NFIPND +L + ++ IITGP
Sbjct: 554 --IDNEYVRPNVY---LGDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGP 608
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + ++MAQ+G FVP D A I V D IF+R+GA D G STFM EM
Sbjct: 609 NMAGKSTYMRQVALIVIMAQMGCFVPADEAYIGVVDKIFSRIGASDDISSGQSTFMVEMS 668
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELT 782
E A+ILK AT +SLII DE+GRGTSTYDG +AWA+ E++ + +I A TLFATH+HELT
Sbjct: 669 EVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELT 728
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ GV NY V + + + L K+ G CD S+GIHVA A P
Sbjct: 729 ELEE---------RIPGVKNYRVD--VKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIP 777
Query: 843 ESVVTLAREKAAELED 858
E V+ A E +LE+
Sbjct: 778 EEVLKRAEEILKQLEE 793
>gi|312793677|ref|YP_004026600.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180817|gb|ADQ40987.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 863
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 333/616 (54%), Gaps = 62/616 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYS---LDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL Y L + YIR+Y + +Y+++D R L + ES ++ SL
Sbjct: 223 SVGNLLKY---LIETQKISFDYIRRYEFYRVQNYLQIDINTKRNLELTESIIQRSRKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G++++T T+ MG RLL W+++PL+DV EIN RLD V+ + ++ + + L R+ D
Sbjct: 280 LGILDQTKTS-MGSRLLKKWIERPLIDVIEINRRLDSVEQLKSNYSILVQIEELLSRMYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLT 434
IERL + + ++ L +S LP ++ L + Q L+KE Y LD LE +
Sbjct: 339 IERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQ---LLKEIYEGLDTLEDIY 395
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQ 490
AL+++S++ D L+ G +I ++ + L+N + S E + K+
Sbjct: 396 ---------ALIDSSINEDAPVTLKEGG-IIKDGFNEEVDRLRNISKNSKELLVQYEEKE 445
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+L K L++ FG+ +TK + ++I +T + ++ +L
Sbjct: 446 R----NLTGIKNLRIGYNKVFGYYIEVTKSNYSLV----PDRYIRKQTLANAERYITEEL 497
Query: 551 KKLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
KKL D+ QK++E E+ +R I+ + E + A+ ++ LDVL SFA +A
Sbjct: 498 KKLEDEILGADQKLIELEYQLFCEIRDR-IEAQI---ERIQKTASYIAILDVLCSFARIA 553
Query: 607 SSCPTPYTRPDINPPDVGD-IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
Y RP++ +GD I + RHP VE NFIPND +L + ++ IITGP
Sbjct: 554 --IDNEYVRPNVC---LGDRIYFKNGRHPVVEKMIGRGNFIPNDTELDQAENRVLIITGP 608
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + ++MAQ+G FVP D A I + D IF+R+GA D G STFM EM
Sbjct: 609 NMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMS 668
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELT 782
E A+ILK AT +SLII DE+GRGTSTYDG +AWA+ E++ + +I A TLFATH+HELT
Sbjct: 669 EVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELT 728
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ GV NY V + + + L K+ G CD S+GIHVA A P
Sbjct: 729 ELEE---------RIPGVKNYRVD--VKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIP 777
Query: 843 ESVVTLAREKAAELED 858
E V+ A E +LE+
Sbjct: 778 EEVLKRAEEILKQLEE 793
>gi|312135299|ref|YP_004002637.1| DNA mismatch repair protein muts [Caldicellulosiruptor owensensis
OL]
gi|311775350|gb|ADQ04837.1| DNA mismatch repair protein MutS [Caldicellulosiruptor owensensis
OL]
Length = 863
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 219/616 (35%), Positives = 331/616 (53%), Gaps = 62/616 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL Y L++ YIR+ Y + +Y+++D R L + ES +K SL
Sbjct: 223 SVGNLLKY---LTETQKISFDYIRRFEFYRIQNYLQIDINTKRNLELTESIIQRSKKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G++++T T+ MG RLL W+++PL+DV EIN RLD V+ ++ + + L R+ D
Sbjct: 280 LGILDQTKTS-MGSRLLKKWIERPLIDVIEINRRLDSVEQLKSSYSILVQIEELLSRMYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLT 434
IERL + + ++ L +S LP ++ L + Q L+KE Y LD LE +
Sbjct: 339 IERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQ---LLKEIYEGLDTLEDIY 395
Query: 435 DDDHLNKFIALVETSVD----LDQLENGEYMISSSYDTGLSALKN-EQESLERQIHSLHK 489
ALV++S++ + E G +I ++ + L+N + S E + K
Sbjct: 396 ---------ALVDSSINEGAPVTLKEGG--IIKDGFNEEVDRLRNISKNSKELLVQYEEK 444
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ +L K L++ FG+ +TK + ++I +T + ++ +
Sbjct: 445 ER----NLTGIKNLRIGYNKVFGYYIEVTKSNYSLV----PDRYIRKQTLANAERYVTEE 496
Query: 550 LKKLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
LKKL D+ QK++E E+ +R I+ + E + A+ ++ LDVL SFA +
Sbjct: 497 LKKLEDEILGADQKLIELEYQLFCEIRDR-IEAQI---ERIQKTASYIAILDVLCSFARI 552
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
A Y RP++ D I ++ RHP VE NFIPND +L + ++ IITGP
Sbjct: 553 A--IDNEYVRPNVYLGD--KIYIKNGRHPVVEKMIGRGNFIPNDTELDQVENRILIITGP 608
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + ++MAQ+G FVP D A I + D IF+R+GA D G STFM EM
Sbjct: 609 NMAGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMS 668
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELT 782
E A+ILK AT +SLII DE+GRGTSTYDG +AWA+ E++ + +I A TLFATH+HELT
Sbjct: 669 EVANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELT 728
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ GV NY V + + + L K+ G CD S+GIHVA A P
Sbjct: 729 ELEE---------RIPGVKNYRVD--VKEEGKNVIFLRKIVRGGCDSSYGIHVARLAGIP 777
Query: 843 ESVVTLAREKAAELED 858
E V+ A E +LE+
Sbjct: 778 EDVLKRAEEILKQLEE 793
>gi|312143591|ref|YP_003995037.1| DNA mismatch repair protein MutS [Halanaerobium hydrogeniformans]
gi|311904242|gb|ADQ14683.1| DNA mismatch repair protein MutS [Halanaerobium hydrogeniformans]
Length = 868
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 261/919 (28%), Positives = 443/919 (48%), Gaps = 98/919 (10%)
Query: 34 AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV---SVSKNMFETIAR 90
A+ FF D+Y GE+A A+ T+ + G ++ V S + + + I +
Sbjct: 21 AILFFRLGDFYEMFGEDAKKAARLLDIALTSRNKGGGEKIDMAGVPAHSAASYIEKLIKK 80
Query: 91 DLLLERTDHTLELYEGSGSNWR-LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFR 149
+ + + + E SG R +++ TPG + E+ + A+NE + A F ++
Sbjct: 81 GIKVAICEQLEDPSEASGIVERDVIRVITPGTV--IENEILADNE---NNYLAAAF-KYQ 134
Query: 150 ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLR 209
N G Y D++ L EF ++ + + + +E L K + L+
Sbjct: 135 SN---YGFAYTDISTGEFYLTEFSAEAA-DKLSDEINRIAPQELLTDENTAKMDKINQLQ 190
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL-VSGFEIAPGALGALLSYA 268
+ G + E +K +F L +++ L ++ + E A A G +L+Y
Sbjct: 191 ---AQYGFTINETEKKDFNY--LKEEM--LSHFNINSLEGFGCEDMETAVYAAGQILAYL 243
Query: 269 ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGM 328
+ + + Y L+ YM LD+A R L + ++ D + SL ++++T T+ M
Sbjct: 244 KQTQKRTVKQITTLHPYYLEDYMVLDAATRRNLELTKTIRDNKTSGSLLSIVDQTITS-M 302
Query: 329 GKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRR 388
G R + W+ QPL++ EI R D ++ +D+ + R + I D+ER+M + +
Sbjct: 303 GGRTIKKWINQPLINQKEIVKRHDSIEELLDNFRILNKCRDLMADIYDLERIMSKITYQS 362
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET 448
A + ++ L S +LP + + ++ + S I++ + D L L++
Sbjct: 363 ANGRDLIALRNSLAKLPGLEKLIADFKTELFSEIQDGF----------DSLEDIFKLIDD 412
Query: 449 SVDLDQ-----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKAL 503
S+ +D+ E G +I +Y+ L L++ + I +L K+ + L
Sbjct: 413 SI-IDEPPTTITEGG--IIKDNYNKKLDELRSLANQGKDWISALQKEEREKTGI---NTL 466
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK-----------K 552
K+ FG+ +T K+ ++ + +T + ++ KLK K
Sbjct: 467 KVGFNKVFGYYLEVTNSHLDKVPERYERK----QTLSNSERYIIPKLKEKEAEVLGAEEK 522
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
+ D K+ E ++ + V+R+ +TA ++++E+DVL+SFA LA
Sbjct: 523 INDLEYKLFVEIRDEIAQEVDRINKTA-----------SLIAEIDVLMSFAFLA--IENN 569
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
Y RP+IN + +II++ RHP VE F+ NDC L + K F IITGPNM GKST+
Sbjct: 570 YNRPEINSGE--EIIIKNGRHPVVEKMFSEQFVANDCYLDQTKQRFIIITGPNMSGKSTY 627
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQ+ + +L+AQVGSFVP D A+I + D IF RVGA D G STFM EM E A+I+
Sbjct: 628 MRQIALIVLLAQVGSFVPADEATIGLTDRIFTRVGASDDLTTGQSTFMVEMNEVANIVNN 687
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHENAN 790
+TDRSLII+DE+GRGTSTYDG +AWA+ E+L E I A TLFATH+HELT L E
Sbjct: 688 STDRSLIILDEVGRGTSTYDGVSIAWAVSEYLNNPERIGARTLFATHYHELTRLEDE--- 744
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
G+ NY+V DS + L+++ G D S+GI VA A PE ++ A+
Sbjct: 745 ------YDGIKNYNVLVKEDSDG--VHFLHRIGEGRADDSYGIEVARLAGLPEEIIISAQ 796
Query: 851 EKAAELEDFTPSAVISDDAKIEVGSKRKRISDP--NDMSRGAARAHQFLKEFSDMPLETM 908
+ + LE ++ K+ + + K + D + + + LK+ + + M
Sbjct: 797 KILSRLE---------ENNKMPLRKREKSLQDSKHQQLPLFEDKENPILKKLDEKDIMDM 847
Query: 909 DLKEALERVKRMKDDLEKD 927
+A+ + ++K DL+K+
Sbjct: 848 TPLDAMNFLYKLKQDLKKE 866
>gi|399217366|emb|CCF74253.1| unnamed protein product [Babesia microti strain RI]
Length = 777
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 226/719 (31%), Positives = 374/719 (52%), Gaps = 59/719 (8%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLR---D 210
++GL D +AE LD+ HFT +ES ++ + + CL+ SS+ T +
Sbjct: 71 SMGLCICDTLNFRFQIAEALDNEHFTVLESVILQVNPESCLISV----SSDIITFKRIDQ 126
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFE--IAPGALGALLSYA 268
LT C V + ++ + RL+ S + L F+ + ++ L+++
Sbjct: 127 ILTTCNVKKVYQDNL-MGQWNIFGNFSRLLV-SQGMLASLCKEFDSYLIQMSVYKLVTHL 184
Query: 269 ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF-SLFGLMNRTCTAG 327
L + + Y ++ YM LD A+ ALN+ NKN SL+ L+N C
Sbjct: 185 NLTMSPFYNNKFSLSAYYIEDYMCLDKASFSALNIF------NKNGPSLYNLLNN-CRTL 237
Query: 328 MGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD-TALRQDLRQHLKRISDIERLMHNLEK 386
+G R L+ W+ QPL + EI+ R D+V++F +D R Q L+++ D++ ++ + K
Sbjct: 238 IGSRRLYRWISQPLTSIKEISQRHDVVESFANDPCCCRLIQAQFLRKVPDLDSIIIIVRK 297
Query: 387 RRAGL---QQIVKLYQSSIRLPYIRSA-LQQYEGQFSSLIKERYLDPLESLTDDDHLNKF 442
+ L + + +LY+ ++ + L Y G +I+ + +PL + ++
Sbjct: 298 NSSQLLSFEDVYRLYECIGATEHLLNCILVNYIGDHKEVIESYFTNPLIEIVG--RFKQY 355
Query: 443 IALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL--DLPVD 500
LVE +VD Q G Y+++ L ++ +++ I +Q +++ D D
Sbjct: 356 QLLVEQTVDFTQAAMGNYVLNPMLHPDLHDIEVKRKCAYDHI-LFPEQIKANICNDKHTD 414
Query: 501 KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFI-VLETRKDGVKFTNTKLKKLGDQYQK 559
+KL + ++FR+ KK+ P I+ K+ I ++ K FT L+ L K
Sbjct: 415 DIIKLINCNDYIYLFRVKKKDYPIIQSKMEKSGIEQVKHNKTEFLFTTEALRNLCKDVSK 474
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ ++ QKE+ + ++ A ++ + + + ++S+LD+LL FA L ++ Y RP++
Sbjct: 475 LTNQHDMIQKEISIKALKVASSYWILVERFSGIISKLDILLGFATLVTTSVGRYVRPNMV 534
Query: 620 PPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
+ D++ SRHP VE D +F+ ND ++ R + IITGPNMGGKST IRQ+G+
Sbjct: 535 SGGIIDLV--QSRHPLVEINIDHGSFVSNDIRIDRDRR-VHIITGPNMGGKSTLIRQIGL 591
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
MAQ+GSFVPC+RA++SV G+STFM EM+E ++ILK A SL
Sbjct: 592 ICCMAQIGSFVPCNRATLSV----------------GLSTFMAEMVEASAILKVADRDSL 635
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMV 798
+IIDELGRGTST++GFG+AW I +HL++ A L ATHFHEL+ L+++ N K M
Sbjct: 636 VIIDELGRGTSTFEGFGIAWGILDHLIKN-EAFVLCATHFHELSNLSNKKKCVIN-KNM- 692
Query: 799 GVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
GV N + +T+ +T Y V G+ + S+GI++AE P+ VV AR K A LE
Sbjct: 693 GVTN------MSNTTTIITFTYNVCEGSSNLSYGINIAEMVKMPQEVVDNARIKLAMLE 745
>gi|302871703|ref|YP_003840339.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
gi|302574562|gb|ADL42353.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
Length = 863
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 217/614 (35%), Positives = 330/614 (53%), Gaps = 58/614 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL Y L++ YIR+ Y + +Y+++D R L + ES +K SL
Sbjct: 223 SVGNLLKY---LTETQKISFDYIRRFEFYRVQNYLQIDINTKRNLELTESIIQRSKKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G++++T T+ MG RLL W+++PL+DV EIN RLD V+ ++ + + L R+ D
Sbjct: 280 LGILDQTKTS-MGSRLLKKWIERPLIDVIEINRRLDSVEQLKSSYSILVQIEELLSRMYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
IERL + + ++ L +S LP ++ L + Q L+KE Y D
Sbjct: 339 IERLSSKFAYKNVNAKDLLSLKRSIEVLPALKKLLSSFSAQ---LLKEIY-------EDF 388
Query: 437 DHLNKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQT 491
D L +L+++S++ D E G +I ++ + L+N + S E + K+
Sbjct: 389 DTLEDIHSLIDSSINEDAPVTLKECG--IIKDGFNEEVDRLRNISKNSKELLVQYEEKER 446
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+L K L++ FG+ +TK + ++I +T + ++ +LK
Sbjct: 447 ----NLTGIKNLRIGYNKVFGYYIEVTKSNYSLV----PDRYIRKQTLANAERYVTEELK 498
Query: 552 KLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
KL D+ QK++E E+ +R I+ + E + A+ ++ LDVL SFA +A
Sbjct: 499 KLEDEILGADQKLIELEYQLFCEIRDR-IEAQI---ERIQKTASYIAILDVLCSFARIA- 553
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNM 666
Y RP++ D I ++ RHP VE NFIPND +L + ++ IITGPNM
Sbjct: 554 -IDNEYVRPNVYLGD--KIYIKNGRHPVVEKMIGRGNFIPNDTELDQVENRVLIITGPNM 610
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST++RQV + ++MAQ+G FVP D A I + D IF+R+GA D G STFM EM E
Sbjct: 611 AGKSTYMRQVALIVIMAQMGCFVPADEAHIGIVDKIFSRIGASDDISSGQSTFMVEMSEV 670
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTAL 784
A+ILK AT +SLII DE+GRGTSTYDG +AWA+ E++ + +I A TLFATH+HELT L
Sbjct: 671 ANILKNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTEL 730
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
+++ GV NY V + + + L K+ G CD S+GIHVA A PE
Sbjct: 731 E---------EKIPGVKNYRVD--VKEEGKNVVFLRKIVRGGCDSSYGIHVARLAGIPEE 779
Query: 845 VVTLAREKAAELED 858
V+ A E +LE+
Sbjct: 780 VLKRAEEILKQLEE 793
>gi|225572115|ref|ZP_03780979.1| hypothetical protein RUMHYD_00409 [Blautia hydrogenotrophica DSM
10507]
gi|225040449|gb|EEG50695.1| DNA mismatch repair protein MutS [Blautia hydrogenotrophica DSM
10507]
Length = 877
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 210/589 (35%), Positives = 317/589 (53%), Gaps = 34/589 (5%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
IR YS D YM LDS+ R L ++E+ + K SL G++++T TA MG R+L +++QPL
Sbjct: 257 IRPYSADKYMLLDSSTRRNLELVETLREKKKRGSLLGVLDKTRTA-MGARMLRSYVEQPL 315
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D +I RLD ++ + LR++LR++L I D+ERL+ + + A + +V S
Sbjct: 316 IDKEKIEERLDAIEELNQNALLREELREYLGPIYDLERLVGRISYKSANPRDLVAFRSSL 375
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
LPY+R L+++ I ER +D +E L ++ ++K A+VE L + G +
Sbjct: 376 KMLPYLRELLREFHSPLLMQIHER-MDAMEEL--ENLVSK--AIVEEP-PLAMKDGG--I 427
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y+ + N + S L + A + + +++K+ FG+ +T
Sbjct: 428 IKDGYN---EEVDNYRRSKSEGKQWLTQLEARERERTGIRSMKIKYNRVFGYYLEVTNS- 483
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
+ ++ +I +T + ++ +LK+L + ++ + EL +V T
Sbjct: 484 ---FKDQVPEDYIRKQTLSNSERYVTPELKELENLILGAEDKLYALEYELFCQVRDTVGR 540
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ A ++ LDVL S A +A YTRP IN V DI + RHP VE
Sbjct: 541 EVVRIQKTAKAVATLDVLASLALVAER--NNYTRPKINTQGVIDI--KNGRHPVVEQMIE 596
Query: 642 VN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
+ FI ND L K +ITGPNM GKST++RQ + +LMAQ+GSFVP D+A+I + D
Sbjct: 597 NDMFIANDTYLDNNKKRISVITGPNMAGKSTYMRQSALIVLMAQLGSFVPADKANIGIVD 656
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
IF RVGA D G STFM EM E A+IL+ AT +SL+I+DE+GRGTST+DG +AWA+
Sbjct: 657 RIFTRVGASDDLASGQSTFMVEMTEVANILRNATAKSLLILDEIGRGTSTFDGLSIAWAV 716
Query: 761 CEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
EH+ + A TLFATH+HELT L ++ GV NY V+ + +
Sbjct: 717 IEHISNPKILGAKTLFATHYHELTELEG---------KISGVNNYCVA--VKEKGDDIVF 765
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISD 867
L K+ G D+S+GI VA A PESV+ A+E EL D +A + D
Sbjct: 766 LRKIVKGGADRSYGIQVARLAGVPESVLDRAKELVEELVDSDITATVRD 814
>gi|146297052|ref|YP_001180823.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|172046026|sp|A4XL47.1|MUTS_CALS8 RecName: Full=DNA mismatch repair protein MutS
gi|145410628|gb|ABP67632.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 863
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 334/610 (54%), Gaps = 50/610 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
++G LL+Y L D YI+K Y + +Y+++D + R L + ES +K SL
Sbjct: 223 SVGNLLNY---LVDTQKISFNYIKKFEFYRVQNYLQIDLSTKRNLELTESIIARSKKNSL 279
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
FG++++ T+ MG RL+ WL++PL+DV EIN RLD V+ ++ L + L+ I D
Sbjct: 280 FGILDQAKTS-MGSRLIKKWLERPLIDVVEINRRLDAVEELYNNFPLLMQIEGLLEGIYD 338
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
IERL + + ++ L +S LP ++ L +++ S L+KE Y + L++L D
Sbjct: 339 IERLSSKFAYKSINAKDLLSLKKSIEVLPRLKELLGEFK---SPLLKELY-NELDTLED- 393
Query: 437 DHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKN-EQESLERQIHSLHKQTA 492
+L+++S++ D L+ G +I ++ + L+N + S E I K+
Sbjct: 394 -----VYSLIDSSINEDAPVGLKEGG-IIKDGFNDHVDRLRNISKNSKELLIQYEEKER- 446
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+L K LK+ FG+ +TK + ++ +I +T + ++ +LKK
Sbjct: 447 ---NLTGIKNLKIGYNKVFGYYIEVTKSNYSLVPER----YIRKQTLANAERYVTEELKK 499
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
L D+ ++ + EL ++ + E + A+ ++ +D L SFA +A
Sbjct: 500 LEDEIINAEQKLVELEYELFCQIRDKIESQIERIQKTASCIAIIDALCSFAHIA--IDNR 557
Query: 613 YTRPDINPPDVGD-IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
YT+P + +GD I ++ RHP VE + NF+PND +L ++ IITGPNM GKS
Sbjct: 558 YTKPIVY---LGDRIYIKNGRHPVVEKMIGYSNFVPNDTELDNDQNRVLIITGPNMAGKS 614
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQV + ++MAQ+G FVP + A I + D IF+R+GA D G STFM EM E A+IL
Sbjct: 615 TYMRQVALIVIMAQMGCFVPAEEAQIGIVDKIFSRIGASDDISSGQSTFMVEMSEVANIL 674
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHEN 788
K AT +SLII DE+GRGTSTYDG +AWA+ E + + +I A TLFATH+HELT L
Sbjct: 675 KNATPKSLIIFDEVGRGTSTYDGLSIAWAVLEFVADKSKIGAKTLFATHYHELTELE--- 731
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
+++ GV NY V + + + L K+ G CD S+GIHVA A PE V+
Sbjct: 732 ------EKISGVKNYRVD--VKEEGKNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLQR 783
Query: 849 AREKAAELED 858
A + +LE+
Sbjct: 784 AEQILKKLEE 793
>gi|406909772|gb|EKD49954.1| hypothetical protein ACD_63C00001G0002 [uncultured bacterium]
Length = 830
Score = 305 bits (782), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 372/715 (52%), Gaps = 55/715 (7%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
+G+ D++ EF D +++++ L L +ECL+P + K+ + +AL +
Sbjct: 136 VGIAVSDVSTGEFRGTEFFDAKKLSSLKNELTKLNPRECLIPKDLYKNF---GILEAL-K 191
Query: 215 C--GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL-VSGFEIAPGALGALLSYAELL 271
C G+ + + F+ ++ +D R VE + + E+A G+ GALLSY L
Sbjct: 192 CVDGMNIYPYEDWNFE-KETAKDFLR-SHFDVESLEGFGIKDEELAIGSAGALLSY---L 246
Query: 272 SDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGM 328
+ +I K YS+D M LD A +R L ++ + K +L +++ T T+ M
Sbjct: 247 RETQKTKLNHISKFNLYSIDERMILDDATLRNLELVSTLRSGEKKNTLLWVLDDTLTS-M 305
Query: 329 GKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRR 388
G RLL + PL++V +I RLD V+ F D LR+++ + LK +SD+ERL +
Sbjct: 306 GGRLLRNSVLSPLINVEKIKNRLDSVEEFCKDNILREEVGEKLKEVSDLERLAGKIGCMS 365
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET 448
A + ++ L S +P ++S L+ + + +K + + + + L+E
Sbjct: 366 ANARDLLALKDSLKIIPALKSILKNVDSKRLIFLKNNL----------NEIKEVVDLIEK 415
Query: 449 SVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKL 505
SVD L++G +I YD L +K+ S + I +L ++ ++ +P +LK+
Sbjct: 416 SVDESSPVTLKDGN-LIKKGYDAKLDKIKDAAISGKEWIKTLQRKESARAKIP---SLKV 471
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ ++K ++ + +I +T + +F +LK+ D E
Sbjct: 472 KFNRVFGYYIEVSKTNLSQV----PSDYIRKQTLVNAERFITPELKEKEDLILNAEERMI 527
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ + + + + + +A +L+ELD+L +FA +A YT+P ++ D G
Sbjct: 528 ELEFRIFVEIRDKVSEYIKDIQKVAKILAELDLLSNFARIA--INNNYTKPKVDTDD-GL 584
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
I EG RHP VE + +F+PND L ++TGPNM GKST+IRQ + LMAQ
Sbjct: 585 EIKEG-RHPVVERIKSAGSFVPNDVSLDNKNCQLIVLTGPNMSGKSTYIRQNALITLMAQ 643
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+GSFVP I V D IF RVGA D RG STFM EM ETA+IL AT RSLII+DE+
Sbjct: 644 IGSFVPAAFVKIGVVDRIFTRVGASDALTRGQSTFMVEMQETANILNNATSRSLIILDEI 703
Query: 745 GRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
GRGTST+DG +AWA+ E++V E++ A TLFATH+HEL L K + V N
Sbjct: 704 GRGTSTFDGVSIAWAVAEYIVSKEKLGAKTLFATHYHELLEL---------EKILPRVKN 754
Query: 803 YHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++V+ + + K+ LYK+ G ++S+GI+V + A P+ VV A + +L+
Sbjct: 755 FNVA--VKESKDKVIFLYKILRGGTNRSYGIYVGKLAGLPKEVVRRAEDVLIKLD 807
>gi|288556899|ref|YP_003428834.1| DNA mismatch repair protein MutS [Bacillus pseudofirmus OF4]
gi|288548059|gb|ADC51942.1| DNA mismatch repair protein MutS [Bacillus pseudofirmus OF4]
Length = 880
Score = 305 bits (782), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 329/608 (54%), Gaps = 48/608 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y + YM+LD R L ++E+ + K SL +++ T TA MG RLL W+++PLLD
Sbjct: 247 YHAEEYMKLDLHTKRNLELVETLREKKKKGSLLSIVDHTVTA-MGGRLLKRWIERPLLDE 305
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+I+ R V AF++D LR+++R L+++ D+ERL + +++V+L +S ++
Sbjct: 306 AKISGRQKAVTAFMNDYFLREEIRDELRQVYDLERLAGRIAYGNVNARELVQLKKSLQKI 365
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P I + + F K+R+ T++ + I L+E S+ D +++G M
Sbjct: 366 PLIEEKVTSLDDSF----KDRWF------TNEAPFEQVIDLLERSIVEDPPISIKDGG-M 414
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK- 520
I ++ L ++ + ++ I L ++ + + K+LK+ FG+ +T+
Sbjct: 415 ILEGFNQELDTYRDASVNGKKWIAELEQKERLETGI---KSLKVGFNKVFGYYLEVTRAN 471
Query: 521 ----EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
EE + +K +T + +F +LK+ + E+ + + +L +
Sbjct: 472 RHLLEEGRYERK--------QTLTNAERFVTPELKEKEALILEAEEKMEQLEYDLFVMIR 523
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ + ++LA +SE+DVLL FA ++ Y +P + P VGD+++EG RHP V
Sbjct: 524 EQVKDYVPHLQALAQTISEIDVLLGFATVSEK--QHYQKPVLRP--VGDVLIEGGRHPVV 579
Query: 637 EAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E+ ++PND L G+ +ITGPNM GKST++RQ+ + +MAQ+G FVP ++A
Sbjct: 580 ESVIQKGEYVPNDVALHPGREML-LITGPNMAGKSTYMRQLALLSIMAQIGCFVPAEKAE 638
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
+ + D IF R+GA D G STFM EMLET L AT+ SLI++DE+GRGTSTYDG
Sbjct: 639 LPIFDQIFTRIGAADDLASGQSTFMVEMLETQYALSKATECSLILLDEIGRGTSTYDGMA 698
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
LA AI E++ EI A TLF+TH+HELTAL+ E + V N HVSA K
Sbjct: 699 LAQAIIEYIHNEIGAKTLFSTHYHELTALSDE---------LEHVQNVHVSAV--EEDGK 747
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
+ L+KV G D+S+GI+VA+ A P+ V + A + LE A IS + +I +
Sbjct: 748 VVFLHKVVDGQADRSYGIYVAQLAELPKEVTSRAEQLLKVLEGQNQKASISTEVEIGNET 807
Query: 876 KRKRISDP 883
++ +P
Sbjct: 808 DNSKVKEP 815
>gi|440781999|ref|ZP_20960227.1| DNA mismatch repair protein MutS [Clostridium pasteurianum DSM 525]
gi|440220717|gb|ELP59924.1| DNA mismatch repair protein MutS [Clostridium pasteurianum DSM 525]
Length = 875
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 314/578 (54%), Gaps = 37/578 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y++ YM +D+ + R L + E+ + +K SL ++++T TA MG R L W+++PL+D
Sbjct: 254 YNVVDYMSIDANSRRNLELTETLREKSKKGSLLWVLDKTSTA-MGGRQLRRWIEEPLIDE 312
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
IN RLD VQ F ++ +L +DL+ LK++ DIERL+ + ++++ L S +L
Sbjct: 313 KAINQRLDSVQEFTENLSLHEDLKNALKQVYDIERLIGKISTLSVNAKEMIFLKNSIEKL 372
Query: 405 PYIRSALQQYEGQFSSLIK--ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMI 462
P I+ L+ G SSL+K + LD L+ + + L+K + L S+ + + +I
Sbjct: 373 PAIKDILK---GCKSSLLKGMQENLDDLKDIYN--ILDKSV-LDSPSISIKEGN----II 422
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
Y+T + L+ + + I L + + K+LK+ FG+ ITK
Sbjct: 423 KDGYNTEVDELRQAKTHGKEWIAKLESSEREETGI---KSLKVGYNKVFGYYIEITKSNL 479
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTF 582
+ + ++I +T + ++ +LK++ ++ E+ N + EL + T
Sbjct: 480 NLVPE---GKYIRKQTLANCERYITEELKQMEEKILGAEEKLINIEYELFVEIRDKISTH 536
Query: 583 SEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DW 641
+ K A +LSELD L SFA +A Y +P I+ G I +E RHP VE
Sbjct: 537 IDRMKKSAKLLSELDCLCSFASVA--LENNYCKPQISTD--GAIKIEEGRHPVVENMLSA 592
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
F+ ND K+ +ITGPNM GKST++RQV + ++M+Q+GSFVP A ISV D
Sbjct: 593 GTFVANDTKINTTDEQLMLITGPNMAGKSTYMRQVALIVIMSQIGSFVPAKNAVISVCDR 652
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF R+GA D G STFM EM E ++ILK AT +SLII+DE+GRGTSTYDG +AW++
Sbjct: 653 IFTRIGASDDLAAGKSTFMVEMWEVSNILKNATTKSLIILDEVGRGTSTYDGLSIAWSVV 712
Query: 762 EHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTML 819
E+L + ++ TLFATH+HELTAL + G+ NY ++ + + L
Sbjct: 713 EYLCTNKNLKCKTLFATHYHELTALEG---------VISGLKNYSIA--VKQIQDNIVFL 761
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
K+ G DQS+GI VA+ A PE V A+E ELE
Sbjct: 762 RKIVSGGADQSYGIEVAKLAGLPEKVTKRAKEILEELE 799
>gi|448599457|ref|ZP_21655361.1| DNA mismatch repair protein MutS [Haloferax alexandrinus JCM 10717]
gi|445736918|gb|ELZ88458.1| DNA mismatch repair protein MutS [Haloferax alexandrinus JCM 10717]
Length = 922
Score = 305 bits (780), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 239/711 (33%), Positives = 358/711 (50%), Gaps = 71/711 (9%)
Query: 152 GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDA 211
G T GL VD++ E L T + AL AL E L P E V +C L D
Sbjct: 166 GDTYGLAVVDVST-----GECL----VTGADRAL-ALEELERLAPAELVVGPDCD-LPD- 213
Query: 212 LTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELL 271
+ + +T F+ D R + P D V + A+GA L+YAE
Sbjct: 214 ------LPFDPMETPFEPEAFDADAARETLSAYAPRPDAVVESDAELRAVGAALAYAEYA 267
Query: 272 SDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+S Y R D +++LD+ A+R+L + ES++ A +LF +++ T A +G
Sbjct: 268 QGDSQLA-YVTRVTRFDPREFLQLDATAIRSLELFESRS-ARAGSTLFSVLDETACA-LG 324
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
+R L WL++PL+D +EI ARLD V+A DD R DLR HL + D+ERL+ + + RA
Sbjct: 325 RRRLEAWLRRPLVDRDEIEARLDAVEALCDDALARADLRDHLSSVYDLERLVARVSRERA 384
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
+ + L + R+P IR AL + S +++ LD LE + D LV +
Sbjct: 385 DARDLRSLKTTLDRVPEIRDALDGTDSDLLSDLRDS-LDELEDVRD---------LVGDA 434
Query: 450 VDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKAL 503
V D E G +I+ +D L ++ E+ + +L +Q + +D +L
Sbjct: 435 VVSDPPQEITEGG--VIADGFDAELDDVRGTAEAGREWVSNLEAREQERTGID-----SL 487
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
++ G+ +T P + ++ + +T K+ +F +LK+ D+ + +
Sbjct: 488 EVGYNQVHGYYIEVTN---PNL-DRVPDDYQRRQTLKNSERFYTPELKEREDEILRASDR 543
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
+ +L V T S +++A L++LDVL + AD+A + Y RP+ + D
Sbjct: 544 ADALEYDLFCEVRADVATESARIQAVADALADLDVLRTLADVAVA--NDYARPEFHAGDT 601
Query: 624 GD---IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
+ I ++ RHP VE AQD F+PN L RG ++TGPNM GKST++RQV +
Sbjct: 602 DESAGIRIDAGRHPVVERAQD--EFVPNPADLPRGS--VALVTGPNMSGKSTYMRQVALV 657
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
L+AQVGSFVP A + V D +F R+GA D G STFM+EM E IL AT SL+
Sbjct: 658 TLLAQVGSFVPAKSARLPVLDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATGDSLV 717
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
++DE+GRGTST DG +A A E L +E+ A TLFATH+H+LT A + A G
Sbjct: 718 LLDEVGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDRA---------G 768
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
V N H +A ++T L+ V G S+G+ VA+ A P SVV AR
Sbjct: 769 VFNLHFTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPASVVERAR 817
>gi|153811376|ref|ZP_01964044.1| hypothetical protein RUMOBE_01768 [Ruminococcus obeum ATCC 29174]
gi|149832503|gb|EDM87587.1| DNA mismatch repair protein MutS [Ruminococcus obeum ATCC 29174]
Length = 872
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 218/672 (32%), Positives = 342/672 (50%), Gaps = 62/672 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GAL Y + I Y+ D +M +DS++ R L ++E+ + K SL +
Sbjct: 230 AAGALFQYLNETQKTALSHMATIHPYTADKFMLIDSSSRRNLELVETLREKQKRGSLLWV 289
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R L +++QPL+D EIN RL V+ LR ++R++L I D+ER
Sbjct: 290 LDKTKTA-MGARTLRGYVEQPLIDAEEINLRLGAVEELTQKPMLRDEIREYLNPIYDLER 348
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + + A + +V S +PYIR LQ++E I E +DPLE +TD
Sbjct: 349 LISRISYQSANPRDMVAFASSLEMIPYIRQILQEFEAPILKQIFED-MDPLEDVTD---- 403
Query: 440 NKFIALVETSVD----LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L++ ++ L Q + G +I Y+ + ++ + ++ + L +
Sbjct: 404 -----LIKRAITDEPPLAQKDGG--IIREGYNADVDKYRHSRTDGKKWLAELEAREKERT 456
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K LK+ FG+ +T + ++ ++ +T + ++ +LK L D
Sbjct: 457 GI---KTLKIKYSRVFGYALEVTNS----FKDQVPDNYVRKQTLTNAERYITQELKDLED 509
Query: 556 QYQKVLEEYKNCQKELV----NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
+ + EL ++V + V + K++A LDV S A +A
Sbjct: 510 LILGAEDRLYALEYELFADVRDKVGKEVVRIQKTAKAIAA----LDVFASLALVAER--N 563
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKS 670
+ RP IN V DI + RHP VE + FI ND L K IITGPNM GKS
Sbjct: 564 NFVRPKINENGVLDI--KNGRHPVVEQMIENDMFIANDTYLDNQKKRVSIITGPNMAGKS 621
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQ + +LMAQ+GSFVP ++A+I + D IF RVGA D G STFM EM E A+IL
Sbjct: 622 TYMRQTALIVLMAQIGSFVPAEKANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANIL 681
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHEN 788
+ AT RSL+I+DE+GRGTST+DG +AW++ EH+ + A TLFATH+HELT L
Sbjct: 682 RNATSRSLLILDEIGRGTSTFDGLAIAWSVIEHISNTKLCGAKTLFATHYHELTELEG-- 739
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
++ GV NY ++ + + L K+ G D+S+GI VA+ A P+SV+
Sbjct: 740 -------KIPGVNNYCIA--VKEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDSVINR 790
Query: 849 AREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGA----ARAHQFLKEFSDM- 903
A+E EL D +A + D + K+K + D DM++ + + + + E D+
Sbjct: 791 AKELVEELSDADITAAVKDLTAPK--KKQKIVYDQVDMAQMSLFDTVQDNDIVDEIRDLD 848
Query: 904 -----PLETMDL 910
P+E M++
Sbjct: 849 MTHLTPMEAMNI 860
>gi|210621373|ref|ZP_03292609.1| hypothetical protein CLOHIR_00552 [Clostridium hiranonis DSM 13275]
gi|210154797|gb|EEA85803.1| hypothetical protein CLOHIR_00552 [Clostridium hiranonis DSM 13275]
Length = 956
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 208/653 (31%), Positives = 345/653 (52%), Gaps = 44/653 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I Y+ YM LD L + ++ K SL +++RT TA MG RLL +++QPL
Sbjct: 256 INVYNSSEYMVLDMFTRTNLELTQTIRGGKKKGSLLHVLDRTSTA-MGGRLLRKYVEQPL 314
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+I++ DD L++DL + LK+I DIER+ + + ++++ L S
Sbjct: 315 INKEKIEYRLNIIEEINDDYILKEDLIEILKKIYDIERICGKIAFEKVTPKELINLKHSI 374
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
+LP ++ ++ S +I + Y++ +++L D L+E S+ D +++G
Sbjct: 375 EKLPLLKETVENS----SCVILKEYINSMDTLED------IYQLIEDSIKEDPAITIKDG 424
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I S Y+ L L++ ++ I + + + K+LK+ FG+ IT
Sbjct: 425 N-IIKSGYNNELDELRDISKNGANIIKDIEAKEKERTGV---KSLKIGFNKVFGYYIEIT 480
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K + + +I +T + +F +LK++ ++ E+ K + E+ +
Sbjct: 481 KTNLA--QANIDESYIRKQTLSNAERFITPELKEIEEKILNAEEKIKAIEYEIFTEIRSA 538
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ +A +++ +DV + A+ AS Y +P+IN + +I + RHP VE
Sbjct: 539 VYKNINRIQEVAHIVANVDVYAALAETASQ--NGYVKPNINNENRLEI--KNGRHPVVEN 594
Query: 639 QDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
+ NF+PND L G++ IITGPNM GKST++RQ + LMA +GSFVP + A I
Sbjct: 595 IVGIENFVPNDTYLKTGENTINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAEYADIP 654
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
+ D IF RVGA D +G STFM EM E + ILK ATD+SL+I+DE+GRGTSTYDG LA
Sbjct: 655 IMDRIFTRVGASDDLSQGQSTFMVEMNEVSMILKNATDKSLVILDEIGRGTSTYDGISLA 714
Query: 758 WAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
W+I E++ + I+ TLFATH+HELT L +EF+ V NY + D +
Sbjct: 715 WSIVEYIQKNIKCKTLFATHYHELTDL----EDEFDE-----VKNYSIGVKEDGND--VI 763
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS------AVISDDAKI 871
L K+ P A D+S+GI+VA+ A P+ V+ + E ++LE S A+ SD+
Sbjct: 764 FLRKIIPQAADKSYGIYVAKLAKLPDEVINRSSEILSDLEKNHVSNMSVLNALSSDNGN- 822
Query: 872 EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
G + ++ + ++ A+ + +E + +E +LK +K + D+L
Sbjct: 823 -SGFAQNIVNIEDRVAEKASYEDKSFEECKGLKIEVDNLKTENNSLKNINDNL 874
>gi|302389749|ref|YP_003825570.1| DNA mismatch repair protein MutS [Thermosediminibacter oceani DSM
16646]
gi|302200377|gb|ADL07947.1| DNA mismatch repair protein MutS [Thermosediminibacter oceani DSM
16646]
Length = 863
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 206/582 (35%), Positives = 310/582 (53%), Gaps = 43/582 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
IR Y YM LD R L + +S D K SL ++++T T+ MG R L W++QPL
Sbjct: 255 IRYYERTEYMALDVTCRRNLELTQSLMDGKKQGSLLWVLDKTVTS-MGGRTLRKWIEQPL 313
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D+ +I R D V+ + LRQ+LR+ LK + D+ERL L + ++ + +
Sbjct: 314 IDIIKIKERQDAVEELYQNYFLRQELREQLKNLYDLERLTGKLVCGNLNARDLLAIKNTV 373
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ----LEN 457
P I+ L G S L+ Y + D LN L+E +++ D E
Sbjct: 374 KHFPKIKELLA---GCRSKLLITLY-------NELDLLNDVYELLEKAINDDPPISVKEG 423
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
G +I +D+ + L+ + I L ++ + K+LK+ FG+ I
Sbjct: 424 G--IIKDGFDSEVDRLRKASTEGKSWIAELERKERERTGI---KSLKVGYNKVFGYYIEI 478
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ 577
TK + K +I +T +G +F +LK+ E+ + + ++ ++ +
Sbjct: 479 TKANLSLVPK----DYIRKQTLANGERFITEELKEYESLIMGAEEKLLDLEYQIFCKIRE 534
Query: 578 TAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE 637
+T K A ++S LD L+S A++ASS Y +P++ D +I+ EG RHP VE
Sbjct: 535 DLITKITRLKKSAQVVSVLDALVSLAEVASS--NNYVKPELTLNDEINIV-EG-RHPVVE 590
Query: 638 A--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
+D + FIPND + S IITGPNM GKST++RQV + +LMAQ+GSFVP A
Sbjct: 591 LTLKDEM-FIPNDTHINCSDSMISIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAQ 649
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
I + D IF R+GA D G STFM EM E A+ILK AT +SL+I+DE+GRGTSTYDG
Sbjct: 650 IGIVDRIFTRIGASDNLASGQSTFMVEMTEVANILKHATPKSLLILDEIGRGTSTYDGLS 709
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
+AWA+ E++ + I+A TLFATH+HE+T L K++ GV N+ V +
Sbjct: 710 IAWAVIEYIHKNIKAKTLFATHYHEITQL----------KKLKGVKNFKV--MVKERGED 757
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ PG D+S+GI VA+ A P+SV+ A+E +LE
Sbjct: 758 IIFLRKIVPGEADRSYGIEVAKLAGLPKSVILRAQEILKDLE 799
>gi|153954199|ref|YP_001394964.1| DNA mismatch repair protein MutS [Clostridium kluyveri DSM 555]
gi|219854807|ref|YP_002471929.1| hypothetical protein CKR_1464 [Clostridium kluyveri NBRC 12016]
gi|189030764|sp|A5N8I5.1|MUTS_CLOK5 RecName: Full=DNA mismatch repair protein MutS
gi|254766624|sp|B9E1Z0.1|MUTS_CLOK1 RecName: Full=DNA mismatch repair protein MutS
gi|146347080|gb|EDK33616.1| MutS [Clostridium kluyveri DSM 555]
gi|219568531|dbj|BAH06515.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 871
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 208/585 (35%), Positives = 316/585 (54%), Gaps = 51/585 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y++ Y+ +D + R L ++ES ++ K SL G++++T T+ MG R L W++QPL+D
Sbjct: 256 YNIVDYLTIDINSKRNLEIVESLRESKKKGSLLGVIDKTNTS-MGGRQLRKWIEQPLIDR 314
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N+I RLD V+ +++ +DL++ LK I DIERL + + +++ L S ++
Sbjct: 315 NKIMERLDSVEEILNNICYHEDLKEALKNIYDIERLAGKISSKSVNAKELNSLKSSIEKI 374
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P I+ L +E +SL+K Y + L+ L D L L SV L + +I
Sbjct: 375 PDIKVILSNFE---TSLLKNMYKN-LDELKDIYMLLDKAILDNPSVSLKEGN----LIKE 426
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK---- 520
YD+ + LK + + I SL +S+ +L K+LK+ FG+ +TK
Sbjct: 427 GYDSEIDRLKEAKVKGKDWIASLE---SSERELTKIKSLKIGYNKVFGYYIEVTKSNLNL 483
Query: 521 --EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
E IRK+ + ++I E ++ K + K + +Y +E +KE V R+
Sbjct: 484 VPEHRYIRKQTLSNAERYITPELKEMEDKILGAEEKLIYLEYNAFVEVRDKVEKE-VTRI 542
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
++ A ++SE+D L S A ++ Y +P+I D + +E RHP
Sbjct: 543 -----------QNSARIISEVDCLTSLA--RAALENNYCKPEITLSD--RVYIEEGRHPV 587
Query: 636 VEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE F+ ND + G++ +ITGPNM GKST++RQV + +MAQ+GSFVP A
Sbjct: 588 VENMLSTGEFVSNDTDIDTGENQLLLITGPNMAGKSTYMRQVALVTIMAQIGSFVPAKSA 647
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
SIS+ D IF R+GA D G STFM EM E ++ILK AT++SLI++DE+GRGTSTYDG
Sbjct: 648 SISICDKIFTRIGASDDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRGTSTYDGL 707
Query: 755 GLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
+AW++ E++ E +R TLFATH+HELT L ++ GV NY VS +
Sbjct: 708 SIAWSVIEYICRESKLRCKTLFATHYHELTKLEG---------KIKGVKNYCVS--VKEV 756
Query: 813 SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A PE V+ ARE LE
Sbjct: 757 ENNIVFLRKIIRGGADQSYGIEVAKLAGLPEEVLKRAREILNSLE 801
>gi|448566814|ref|ZP_21637069.1| DNA mismatch repair protein MutS [Haloferax prahovense DSM 18310]
gi|445713403|gb|ELZ65180.1| DNA mismatch repair protein MutS [Haloferax prahovense DSM 18310]
Length = 914
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 211/609 (34%), Positives = 324/609 (53%), Gaps = 52/609 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLF 317
A+GA L+YAE +S Y R D +++LD+ A+R+L + ES++ A +LF
Sbjct: 255 AVGAALAYAEYAQGDSKL-EYVTRVTRFDPREFLQLDATAIRSLELFESRS-ARAGSTLF 312
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
+++ T A +G+R L WL++PL+D +EI ARLD V A DD R DLR+HL + D+
Sbjct: 313 SVLDETACA-LGRRRLEAWLRRPLVDRDEIEARLDAVDALCDDALARTDLREHLSSVYDL 371
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + + RA + + L + R+P +R AL + + +++ LD LE + D
Sbjct: 372 ERLVARVSRERADARDLRSLKTTLDRVPEVREALAGTDSDLLADLRDS-LDELEDVRD-- 428
Query: 438 HLNKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQT 491
LV +V D E G +I+ +D L ++ E+ + +L +Q
Sbjct: 429 -------LVGDAVVSDPPQEITEGG--VIADGFDAELDDIRGTAEAGREWVSNLEAREQE 479
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+ +D +L++ G+ +T P + ++ + +T K+ +F +LK
Sbjct: 480 RTGID-----SLEVGYNQVHGYYIEVTN---PNL-DRVPDDYRRRQTLKNSERFYTPELK 530
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
+ D+ + + + +L V T S +++A L++LDVL + AD+A +
Sbjct: 531 EREDEILRASDRADALEYDLFCEVRADVATESARIQAVADALADLDVLRTLADVAVA--N 588
Query: 612 PYTRPDINPPDVGD--IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y RP+ VGD I ++ RHP VE AQD F+PN L RG ++TGPNM G
Sbjct: 589 DYARPEFRAGGVGDGGIHIDAGRHPVVERAQD--EFVPNPADLPRGS--VALVTGPNMSG 644
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQV + ++AQVGSFVP + A + V D +F R+GA D G STFM+EM E
Sbjct: 645 KSTYMRQVALVCVLAQVGSFVPAESARLPVLDRVFTRIGASDDIAGGQSTFMREMSELTE 704
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL AT SL+++DE+GRGTST DG +A A E L +E+ A TLFATH+H+LT A +
Sbjct: 705 ILHNATGDSLVLLDEVGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDR 764
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
GV N+H +A ++T L+ V G S+G+ VA+ A P SVV
Sbjct: 765 E---------GVFNHHFTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPASVVER 813
Query: 849 AREKAAELE 857
AR+ E E
Sbjct: 814 ARDLVDETE 822
>gi|220932004|ref|YP_002508912.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
gi|254766630|sp|B8CX98.1|MUTS_HALOH RecName: Full=DNA mismatch repair protein MutS
gi|219993314|gb|ACL69917.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
Length = 896
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 217/629 (34%), Positives = 321/629 (51%), Gaps = 69/629 (10%)
Query: 251 VSGF--EIAPGALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLE 305
+SGF E P A+ A L D +I + Y+L YM LDSA L +
Sbjct: 221 LSGFGCEDKPAAILAAGEIINFLKDTQKRTLEHINRITTYNLTDYMVLDSATRYNLELTS 280
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ SL ++++T T+ MG RL+ W+ QPL+D N+I RLD V+ V++ L Q
Sbjct: 281 TIRGNKHKGSLLNVLDQTITS-MGGRLIKKWINQPLIDRNKIETRLDAVEELVNNYLLLQ 339
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
++R+HLK I D+ER++ + A + + L S ++LP I+ L+Q + + E
Sbjct: 340 EIREHLKGIYDLERILGKVSYGSANARDLAALKYSILKLPQIKKDLEQLNTKLFKNMHET 399
Query: 426 YLDPLESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLE 481
+ DPL L L++ S+ + E G +I Y + L L+ + +
Sbjct: 400 F-DPLIDLA---------GLLDRSIVDEPPVSVREGG--LIKDGYSSELDELRKARTEGK 447
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
I +L K + +LK+ FG+ ITK ++ T + +T +
Sbjct: 448 DWIANLQKTERERTGIS---SLKVGFNKVFGYYIEITKANLDRVPDNYTRK----QTLSN 500
Query: 542 GVKFTNTKLK-----------KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+F +LK K+ D K+ + ++ ++ + R+ +TA
Sbjct: 501 SERFITPELKEKEALVLGAEEKINDLEYKLFVKIRDIVRDNIKRIKKTA----------- 549
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
++S+LDVL S A ++ Y RP IN V +II RHP VE F+PND
Sbjct: 550 AIISKLDVLTSLAQ--NALERDYNRPRINNDGVIEII--KGRHPVVEDMGKGAFVPNDTY 605
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L + F IITGPNM GKST++RQV + +LMAQ+GSFVP D+A+I + D IF RVGA D
Sbjct: 606 LDLEEERFIIITGPNMSGKSTYMRQVALIVLMAQMGSFVPADKATIGIVDRIFTRVGASD 665
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEI 768
G STFM EM E A+I+ AT SLII+DE+GRGTSTYDG +AWA+ E++ + I
Sbjct: 666 DLTTGQSTFMVEMNEVANIVNNATRNSLIILDEVGRGTSTYDGLSIAWAVSEYINNPDRI 725
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACD 828
A TLFATH+HELT L + G+ NY+V D + L+K+ PG
Sbjct: 726 GARTLFATHYHELTQLENR----------PGIKNYNVLVEEDEDG--VHFLHKIIPGKAS 773
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELE 857
+S+GI VA+ A P ++ A+E AELE
Sbjct: 774 ESYGIEVAQLAGLPMEIIIRAQEILAELE 802
>gi|402302217|ref|ZP_10821337.1| DNA mismatch repair protein MutS [Selenomonas sp. FOBRC9]
gi|400381204|gb|EJP34008.1| DNA mismatch repair protein MutS [Selenomonas sp. FOBRC9]
Length = 869
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 238/687 (34%), Positives = 347/687 (50%), Gaps = 65/687 (9%)
Query: 260 ALGALLSY--AELLSDESNYGNYYIRKYSLDSY--MRLDSAAMRALNVLESKTDANKNFS 315
A+ ALL Y A +++D S R LD+ M+LD+ +R L + S D K +
Sbjct: 231 AIAALLRYLHATVMADLSQIN----RLSFLDAAAGMQLDTYTLRNLEITRSLRDGGKKHT 286
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
LF +++ T T MG RLL WL+ PLL + I+ARLD V V ++LR LR+ L+ I
Sbjct: 287 LFDVLDFTRTP-MGTRLLKSWLEHPLLAPHRIDARLDAVAELVSASSLRAKLRELLRSIY 345
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD 435
D ERL+ +E + A + +V L S LP +R+AL G S L+ R + +E+
Sbjct: 346 DFERLLTRIETQAANARDLVALRVSLAALPGVRAALS---GAKSRLLT-RAAEGIETF-- 399
Query: 436 DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS----LHKQT 491
DD +A + L + G +I Y +E + L R H L +
Sbjct: 400 DDLRELLMAAIVDEPGLSVRDGG--IIRMGY-------SDELDELHRFSHDSKSLLQEME 450
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+ D K LK+ FG+ + ++ +I +T + +F +LK
Sbjct: 451 ERERDRTGIKTLKIGYNKVFGYYIEVRHSGSDRV----PADYIRKQTLANAERFITEELK 506
Query: 552 K-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
+ L Q + V EY + EL +RV + V +++A M++ +DVL S A+ A
Sbjct: 507 EFETKILSAQEKIVALEY-SLFAELRDRVKERLVPI----QNVARMIARVDVLQSMAEAA 561
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRGKSWFQIITG 663
+S Y RP I P G+II++ RHP VE +D F+PND L G + +ITG
Sbjct: 562 ASYR--YVRPVIRPASDGEIIIKDGRHPLVERLLERDL--FVPNDTHLSHGGTETMLITG 617
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST++RQV + LMAQVGSFVP A I+ D IF R+GA D + G STFM EM
Sbjct: 618 PNMAGKSTYMRQVALLTLMAQVGSFVPARSAEIAPVDRIFTRIGASDDLVSGQSTFMVEM 677
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
E A IL+ AT SL+I+DE+GRGTST+DG +A A+ EH+ I A TLFATH+HELT
Sbjct: 678 NEVAQILREATRDSLVILDEIGRGTSTFDGMSIARAVVEHIDTRIHAKTLFATHYHELTE 737
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
+A+E + NY ++ + R + L ++ GA D+S+GIHVA A P
Sbjct: 738 MANER-----------IRNYCIA--VREKGRGVVFLRRIVAGAADKSYGIHVARLAGLPP 784
Query: 844 SVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM 903
V A E LE AV A + + P + + A L+E +
Sbjct: 785 KVTERAEEILGTLE---ACAVTQRAAAAAGQPETDTPTVPEEPGMASLFAGGTLEELRGL 841
Query: 904 PLETMDLKEALERVKRMKDDLEKDAGD 930
+ TM EA+ + R+++ K+AG+
Sbjct: 842 DVMTMTPLEAMNTLYRLQEQARKEAGE 868
>gi|220929119|ref|YP_002506028.1| DNA mismatch repair protein MutS [Clostridium cellulolyticum H10]
gi|254766623|sp|B8I2Q5.1|MUTS_CLOCE RecName: Full=DNA mismatch repair protein MutS
gi|219999447|gb|ACL76048.1| DNA mismatch repair protein MutS [Clostridium cellulolyticum H10]
Length = 873
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 219/643 (34%), Positives = 336/643 (52%), Gaps = 54/643 (8%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+ ++IA A GALL Y E + Y+L+ YM LD+++ R L + E+ +
Sbjct: 227 IQEYDIAVNASGALLKYLESTQKVNLSHIQKFNSYALEEYMILDASSRRNLELTETMREK 286
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+K SL ++++T T+ MG RLL W++QPL++ +I+ RLD V+ + +R + R+
Sbjct: 287 SKKGSLLWVLDKTMTS-MGGRLLRKWIEQPLINHGDISLRLDAVEELKNKFMVRVEAREL 345
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
LKR+ DIERLM + + ++ L S ++PYI+S L +E ++ E+ LD L
Sbjct: 346 LKRVYDIERLMGKVVLGSVNCRDLIALKNSMCQIPYIKSLLNGFEAEYIKNCGEQ-LDCL 404
Query: 431 ESLTDDDHLNKFIALVETSVDLDQ-----LENGEYMISSSYDTGLSALKNEQESLERQIH 485
E + + L+E S+ +D+ E G +I Y+ + L+ + I
Sbjct: 405 EDVCN---------LIEVSI-IDEPPVTIKEGG--IIKDGYNPEVDKLRMASIQGKDWIA 452
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+L AS + K LK+ FG+ +TK + + ++I +T + ++
Sbjct: 453 ALE---ASQREKTGIKNLKVGFNRVFGYYIEVTKSYFSLVPE----EYIRKQTLSNCERY 505
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
+LK++ D E+ + L + + KS A L+E+DVL S A++
Sbjct: 506 ITPELKEIEDTILGAEEKIIQLEYSLFVEIKEKIAEQLSRIKSTARALAEIDVLASLAEV 565
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
A Y +P+++ D +II EG RHP VE D F+PND L + IITGP
Sbjct: 566 ADR--EGYCKPEVSLSDKIEII-EG-RHPVVEKMTDKSGFVPNDTVLDMEEDRLAIITGP 621
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQ + +LMAQ+GSFVP A I + D IF RVGA D G STFM EM
Sbjct: 622 NMAGKSTYMRQTALIVLMAQIGSFVPAATAKIGLVDRIFTRVGASDDLASGQSTFMVEMS 681
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELT 782
E A+IL AT RSL+++DE+GRGTST+DG +AWA+ E++V E++ TLFATH+HELT
Sbjct: 682 EVANILINATKRSLLVLDEIGRGTSTFDGLSIAWAVIEYIVNKEQLGCRTLFATHYHELT 741
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ G+ NY ++ + + L K+ G D S+GI VA+ A P
Sbjct: 742 ELEG---------KLPGIKNYCIT--VKEKGEDVIFLRKIIRGGADGSYGIQVAKLAGVP 790
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPND 885
+SV+ A+E + L DDA I K +RI D
Sbjct: 791 QSVIDRAKEILSNL----------DDADINRSGKARRIKKQVD 823
>gi|39996921|ref|NP_952872.1| DNA mismatch repair protein MutS [Geobacter sulfurreducens PCA]
gi|48428288|sp|P61667.1|MUTS_GEOSL RecName: Full=DNA mismatch repair protein MutS
gi|39983809|gb|AAR35199.1| DNA mismatch repair ATPase MutS-1 [Geobacter sulfurreducens PCA]
Length = 871
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 304/601 (50%), Gaps = 34/601 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+ A+L Y + Y++ Y ++ LD ++ R L + + D + SL GL
Sbjct: 237 AVAAVLHYLQQTQKGDVRHISYLQAYRTQEFLVLDESSRRNLELNATIGDGKRRGSLLGL 296
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT TA MG R L W+ PL+ + +IN RLD V+ V D RQ +R L + D+ER
Sbjct: 297 LDRTVTA-MGGRKLKQWINYPLVSIEKINERLDAVEELVADAEFRQGVRAALDGVYDLER 355
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + A + +V L S +RLP + + L +S + R D ++ L D + L
Sbjct: 356 LNGRISLASASAKDLVALRASLVRLPSLIALLTPA----ASTLLARLRDGIDLLADVEEL 411
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
+ + L E G +I+ Y + L L++ + I L Q + +
Sbjct: 412 IGRGIVPDPPFVLR--EGG--IIAQGYHSELDELRSISREGKGFIARLEAQEKARTGI-- 465
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+LK+ FG+ +TK I +I +T + +F +LK+ ++
Sbjct: 466 -SSLKVRYNKVFGYYIEVTKSNLSAI----PDDYIRRQTLANAERFITPELKEYEEKVLG 520
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ + L + Q E A L+ LDVL + AD+A Y RP ++
Sbjct: 521 AEDRIVELEYALFQDIRQRVAAQGERIARTADRLATLDVLAALADVAHD--HRYVRPTVD 578
Query: 620 PPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
D I++ G RHP VEA + F+ ND +L G++ IITGPNM GKSTF+RQV +
Sbjct: 579 EGDA--IVVTGGRHPVVEALNRSERFVANDVQLDNGENQLVIITGPNMAGKSTFMRQVAL 636
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
+LMAQ GSFVP D ASI V D IF RVGA D RG STFM EM+ETA+IL+ AT RSL
Sbjct: 637 IVLMAQTGSFVPADEASIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATPRSL 696
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
+++DE+GRGTST+DG +AWA+ E+L E A TLFATH+HELT LA T+
Sbjct: 697 VVLDEIGRGTSTFDGVSIAWAVAEYLHDTERCAAKTLFATHYHELTELA-------VTRN 749
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
V N V D ++ L K+ G S+GI VA A P+ V+ A+E L
Sbjct: 750 RVKNCNVAVKEWND----QVIFLRKIVEGGASHSYGIQVARLAGLPQEVIERAKEILHNL 805
Query: 857 E 857
E
Sbjct: 806 E 806
>gi|409912343|ref|YP_006890808.1| DNA mismatch repair ATPase MutS-1 [Geobacter sulfurreducens KN400]
gi|298505934|gb|ADI84657.1| DNA mismatch repair ATPase MutS-1 [Geobacter sulfurreducens KN400]
Length = 871
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 304/601 (50%), Gaps = 34/601 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+ A+L Y + Y++ Y ++ LD ++ R L + + D + SL GL
Sbjct: 237 AVAAVLHYLQQTQKGDVRHISYLQAYRTQEFLVLDESSRRNLELNATIGDGKRRGSLLGL 296
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT TA MG R L W+ PL+ + +IN RLD V+ V D RQ +R L + D+ER
Sbjct: 297 LDRTVTA-MGGRKLKQWINYPLVSIEKINERLDAVEELVADAEFRQGVRAALDGVYDLER 355
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + A + +V L S +RLP + + L +S + R D ++ L D + L
Sbjct: 356 LNGRISLASASAKDLVALRASLVRLPSLIALLTPA----ASTLLARLRDGIDLLADVEEL 411
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
+ + L E G +I+ Y + L L++ + I L Q + +
Sbjct: 412 IGRGIVPDPPFVLR--EGG--IIAQGYHSELDELRSISREGKGFIARLEAQEKARTGI-- 465
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+LK+ FG+ +TK I +I +T + +F +LK+ ++
Sbjct: 466 -SSLKVRYNKVFGYYIEVTKSNLSAI----PDDYIRRQTLANAERFITPELKEYEEKVLG 520
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ + L + Q E A L+ LDVL + AD+A Y RP ++
Sbjct: 521 AEDRIVELEYALFQDIRQRVAAQGERIARTADRLATLDVLAALADVAHD--HRYVRPTVD 578
Query: 620 PPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
D I++ G RHP VEA + F+ ND +L G++ IITGPNM GKSTF+RQV +
Sbjct: 579 EGDA--IVVTGGRHPVVEALNRSERFVANDVQLDNGENQLVIITGPNMAGKSTFMRQVAL 636
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
+LMAQ GSFVP D ASI V D IF RVGA D RG STFM EM+ETA+IL+ AT RSL
Sbjct: 637 IVLMAQTGSFVPADEASIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATPRSL 696
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
+++DE+GRGTST+DG +AWA+ E+L E A TLFATH+HELT LA T+
Sbjct: 697 VVLDEIGRGTSTFDGVSIAWAVAEYLHDTERCAAKTLFATHYHELTELA-------VTRN 749
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
V N V D ++ L K+ G S+GI VA A P+ V+ A+E L
Sbjct: 750 RVKNCNVAVKEWND----QVIFLRKIVEGGASHSYGIQVARLAGLPQEVIERAKEILHNL 805
Query: 857 E 857
E
Sbjct: 806 E 806
>gi|374296085|ref|YP_005046276.1| DNA mismatch repair protein MutS [Clostridium clariflavum DSM
19732]
gi|359825579|gb|AEV68352.1| DNA mismatch repair protein MutS [Clostridium clariflavum DSM
19732]
Length = 872
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 318/620 (51%), Gaps = 58/620 (9%)
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
F+I A GALL Y E + KY ++ YM LD+A R L + E+ + N+
Sbjct: 230 FDIYINASGALLEYLEQTQKVNLNHIQSFNKYKIEEYMILDAATRRNLELTETMREKNRK 289
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL +++RT T+ MG R L W++QPL+++ +I RL+ V+ F D +R ++R+ LKR
Sbjct: 290 GSLLWVLDRTMTS-MGGRTLRKWIEQPLINIYDIRDRLNAVREFKDKFMVRMEVRELLKR 348
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
+ DIERLM + A + ++ L S ++PYI+S L+ + E
Sbjct: 349 VYDIERLMGKIVLGSANCRDLISLKNSLGQIPYIKSLLKDLNESLNR----------ECD 398
Query: 434 TDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
D D L+ +++ ++ + E G +I Y+ + L+ + + L
Sbjct: 399 RDIDSLDDVYEIIDRAICDDPPVSVKEGG--IIKEGYNKEVDELRRASVDGKSWLVELEN 456
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKE----EPKIRKKLT----TQFIVLETRKD 541
+ + K LK+ FG+ +TK P +K T ++I E ++
Sbjct: 457 REREKTGI---KNLKVGFNKVFGYYIEVTKSYFSLVPPNYIRKQTLANCERYITEELKEI 513
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
K + + + +YQ +E E +NR+ +TA L+++DV+ S
Sbjct: 514 EEKVLGAEDRLVELEYQLFVEVRSKVASE-INRIKRTA-----------KALAQIDVICS 561
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQI 660
A++A YT P++N DV II RHP VE D F+PND L ++ I
Sbjct: 562 LAEVADR--ESYTMPEVNNEDVIHII--DGRHPVVEKVIDQGAFVPNDTYLDMAENQIAI 617
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQV + +LMAQ+GSFVP A I + D IF RVGA D G STFM
Sbjct: 618 ITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAVIGIADRIFTRVGASDDLAAGQSTFM 677
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHF 778
EM E A+IL AT +SL+I+DE+GRGTSTYDG +AW++ EH+ + +I A TLFATH+
Sbjct: 678 VEMSEVANILNNATSKSLLILDEIGRGTSTYDGLSIAWSVIEHISDKKKIGARTLFATHY 737
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HELT L + GV NY +S ++ + L K+ G D S+G+ VA
Sbjct: 738 HELTELEG---------SIDGVKNYCIS--VEEKGEDIIFLRKIIRGGADNSYGVQVARL 786
Query: 839 ANFPESVVTLAREKAAELED 858
A P V+ A+E ELE+
Sbjct: 787 AGVPAPVINRAKEILKELEE 806
>gi|323453270|gb|EGB09142.1| hypothetical protein AURANDRAFT_25096 [Aureococcus anophagefferens]
Length = 404
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 172/394 (43%), Positives = 233/394 (59%), Gaps = 15/394 (3%)
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKA---LKLDKGTQFGHVFRITKKEEPKIRK 527
A+ + E++ R + A ++A +KLDK G VFR ++ + K K
Sbjct: 6 GAIDDAHEAVNRAVDDCDAVGARGYKAGGERAKWPVKLDKDAARGRVFRCVRRYDEKSLK 65
Query: 528 KLTTQ---FIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
++ T +L K+GV FT L K YQ +Y+ Q+ L +++TA T++
Sbjct: 66 QVRTGKDGLEILSYLKNGVYFTTEALVKACGAYQAAKGDYEQSQRALTAELVKTAATYAP 125
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTP-YTRPDINPPDVGDIILEGSRHPCVEAQDWVN 643
+F L+ LD L +FA A+ P Y RP + D + L+G+RHP VE +D V
Sbjct: 126 VFARCGGALARLDALTAFATAAAFAPGGAYCRPALAAGDGAPLELKGARHPVVEHRDGVT 185
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
FI ND L ++TGPNMGGKST+IR + +MAQ GS VPC+ A++ + D +
Sbjct: 186 FIANDYALGGDAGSLVLVTGPNMGGKSTYIRGLAALAVMAQAGSLVPCEAAALPLFDSVL 245
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
ARVGAGD +GVSTFM EMLE + IL AT RSL+IIDELGRGTSTYDGFGLAWAI EH
Sbjct: 246 ARVGAGDSLTKGVSTFMAEMLEASQILHVATPRSLVIIDELGRGTSTYDGFGLAWAISEH 305
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
++ E +A LFATHFHELT LA ++ N HVSAH+D + K+T LY+V
Sbjct: 306 ILLESKAKCLFATHFHELTQLADDHPGRAR--------NRHVSAHVDDDTGKITFLYEVR 357
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
G C +SFGI VAE A FP++ + +A+ KAA+LE
Sbjct: 358 DGPCLESFGIKVAELAGFPDATLAVAKRKAADLE 391
>gi|317131677|ref|YP_004090991.1| DNA mismatch repair protein MutS [Ethanoligenens harbinense YUAN-3]
gi|315469656|gb|ADU26260.1| DNA mismatch repair protein MutS [Ethanoligenens harbinense YUAN-3]
Length = 871
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 237/683 (34%), Positives = 336/683 (49%), Gaps = 50/683 (7%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+ G E A AL ALL+Y + YS +MRLD + R L + E+
Sbjct: 228 LDGKEPAVRALNALLAYLRQTQITGLERLNQLDVYSDAQFMRLDLSTRRNLELCETLRGR 287
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
K +L +++RT TA MGKRLL W++QPLL I RL V D LR+D+ +
Sbjct: 288 EKRGTLLWVLDRTKTA-MGKRLLRAWIEQPLLHPGPITRRLAAVDELFSDAVLREDVMEI 346
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L + D+ERLM + A +++ L ++ RLP ++ + + + S I R +DPL
Sbjct: 347 LDGVHDLERLMTRIVYGTANARELRALAETIGRLPGLKERVAPCKARLLSDIA-RNIDPL 405
Query: 431 ESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
L VE + E G +I Y + +L+ E + L +
Sbjct: 406 PDL-----FELITKAVEEDPPVSVREGG--LIRPGYHAEIDSLR---EIMRGGKGFLAEV 455
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
A + + K LK+ FG+ +TK ++ + +I +T + ++ +L
Sbjct: 456 EAREKEKTGIKNLKIGYNRVFGYYIEVTKSNIAQVPE----DYIRKQTLTNCERYITQEL 511
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
K+L + E + ++ + V + +S A L+ LDVL SFA A+
Sbjct: 512 KELEGRVLGAQERVVQLEYDVFDGVRRQVAEQLHRIQSTAGALAGLDVLCSFAQAAAM-- 569
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
Y RPD+ G I ++ RHP VEA V F+PND +L IITGPNM GK
Sbjct: 570 NRYCRPDLGVD--GRISIKDGRHPVVEAILSGVPFVPNDTELDMDGDRVAIITGPNMAGK 627
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST++RQV + LMAQ+GSFVP A I V D IF RVGA D G STFM EM E ASI
Sbjct: 628 STYMRQVALITLMAQIGSFVPASAAHIGVVDSIFTRVGASDDLASGQSTFMVEMTEVASI 687
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHFHELTALAHE 787
L+ AT SL+++DE+GRGTST+DG +A A+ EH+ + R A TLFATH+HELT L
Sbjct: 688 LENATQNSLVLLDEIGRGTSTFDGMSIARAVVEHVADLKRCGAKTLFATHYHELTVL--- 744
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
Q+ GV NY V+ + +LT L ++ PG D S+GI VA+ A P VVT
Sbjct: 745 ------EDQLSGVRNYSVA--VKKHGEELTFLRRIIPGGADDSYGIEVAKLAGIPARVVT 796
Query: 848 LAREKAAELEDFTPSAVISDDAKIEVGSKRKRI-SDPNDMSRGAARAHQFLKEFSDM--- 903
ARE ELE P AV + G KR + + P M+ +A L +
Sbjct: 797 RAREILRELEAGQPVAVPA-------GRKRAAVEAAPAQMALMNPKAEDVLGRLRGIDAN 849
Query: 904 ---PLETMDLKEALERVKRMKDD 923
P+E ++L L R+ KDD
Sbjct: 850 ALTPIEALNLLFELCRIA--KDD 870
>gi|254167808|ref|ZP_04874658.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289597150|ref|YP_003483846.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623336|gb|EDY35901.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289534937|gb|ADD09284.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 828
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 218/680 (32%), Positives = 347/680 (51%), Gaps = 60/680 (8%)
Query: 251 VSGFEIAPGALGAL---LSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE 305
+SGF I L A L YA+ ++D N + ++ Y D Y+ LDS ++ L +
Sbjct: 202 LSGFGIGEYGLRAAASALKYAKENTMNDLKNITS--LQGYFKDKYLILDSTTLKNLEIFH 259
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ +K ++L+ MN+ C MG RLL W+++PL D++EIN RLD V+ + L+
Sbjct: 260 NVLGEDK-YTLYHTMNK-CETPMGARLLKRWMQRPLKDIDEINDRLDAVEELANKQLLQD 317
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
+R L RI DIER+ + RA + ++ L +S + +R + S ++K
Sbjct: 318 SIRTILSRIKDIERIKTRVSLGRAAPRDLISLKESLKQADKLRINFE------SKILKN- 370
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
S + + I L+E +++ D GE +I Y+ L +K + + I
Sbjct: 371 ------SASKIYGIEGIIELIENAINGD-YPVGEGVIKEGYNEELDEIKRIASNAKLLIG 423
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+ ++ + + K LK+ G+ ++K K+ K + +T K+ +F
Sbjct: 424 KMEERERRNTGI---KNLKIGYNDVMGYYIEVSKSNLSKVPKHYRRK----QTLKNSERF 476
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
+LK+L + + + ++ +++ ++ + A ++ +DV+ S A +
Sbjct: 477 VTDELKELEYKILSAKDRIYEIENKIYRDILKKLGEMIDVIERTAKSIAIIDVISSLARV 536
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPN 665
A YTRP+++ + DI + RHP VE + +F+PND I + F I+TGPN
Sbjct: 537 A--LEMNYTRPEVD--ESMDIEIRNGRHPVVEL--YTDFVPNDTH-INSDARFIILTGPN 589
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST++RQV + +++AQ+GSFVP D A I + D I+ RVGA D RG STFM EM+E
Sbjct: 590 MAGKSTYMRQVALIVILAQMGSFVPADYAKIGIVDRIYTRVGASDDITRGRSTFMMEMVE 649
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
A+IL AT+RSLI++DE+GRGTSTYDG +AW+I EH+ IRA T+FATH+H L L
Sbjct: 650 LANILNTATERSLILLDEIGRGTSTYDGLAIAWSITEHIHNSIRARTIFATHYHHLIDL- 708
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
EN + V NYH++ + T L + KV PG +S+GI VA+ A PE V
Sbjct: 709 -ENV-------LDNVRNYHIA--VKETQDGLIFVRKVMPGGMSKSYGIEVAKLAGVPEKV 758
Query: 846 VTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPL 905
V A+E +I ++ IEV +K I M G L E M +
Sbjct: 759 VKRAKEIL---------NLIEEEKVIEVRRGKKIIQ---TMLFGEENCSDILDEIKRMDI 806
Query: 906 ETMDLKEALERVKRMKDDLE 925
+ EAL ++ +K +E
Sbjct: 807 MNLTPLEALNKLNELKRKIE 826
>gi|433432036|ref|ZP_20407731.1| DNA mismatch repair protein MutS [Haloferax sp. BAB2207]
gi|432193691|gb|ELK50391.1| DNA mismatch repair protein MutS [Haloferax sp. BAB2207]
Length = 922
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 238/711 (33%), Positives = 357/711 (50%), Gaps = 71/711 (9%)
Query: 152 GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDA 211
G T GL VD++ E L T + AL AL E L P E V +C L D
Sbjct: 166 GDTYGLAVVDVST-----GECL----VTGADRAL-ALEELERLAPAELVVGPDCD-LPD- 213
Query: 212 LTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELL 271
+ + +T F+ D R + P D V + A+GA L+YAE
Sbjct: 214 ------LPFDPMETPFEPEAFDADAARETLSAYAPRPDAVVESDAELRAVGAALTYAEYA 267
Query: 272 SDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+S Y R D +++LD+ A+R+L + ES++ A +LF +++ T A +G
Sbjct: 268 QGDSQLA-YVTRITRFDPREFLQLDATAIRSLELFESRS-ARAGSTLFSVLDETACA-LG 324
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
+R L WL++PL+D + I ARLD V+A DD R DLR HL + D+ERL+ + + RA
Sbjct: 325 RRRLEAWLRRPLVDRDRIEARLDAVEALCDDALARADLRDHLSSVYDLERLVARVSRERA 384
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
+ + L + R+P IR AL + S +++ LD LE + D LV +
Sbjct: 385 DARDLRSLKTTLDRVPEIREALAGTDSDLLSDLRDS-LDELEDVRD---------LVGDA 434
Query: 450 VDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKAL 503
V D E G +I+ +D L ++ E+ + +L +Q + +D +L
Sbjct: 435 VVSDPPQEITEGG--VIADGFDAELDDVRGTAEAGREWVSNLEAREQERTGID-----SL 487
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
++ G+ +T P + ++ + +T K+ +F +LK+ D+ + +
Sbjct: 488 EVGYNQVHGYYIEVTN---PNL-DRVPDDYQRRQTLKNSERFYTPELKEREDEILRASDR 543
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
+ +L V T S +++A L++LDVL + AD+A + Y RP+ + D
Sbjct: 544 ADALEYDLFCEVRADVATESARIQAVADALADLDVLRTLADVAVA--NDYARPEFHAGDT 601
Query: 624 GD---IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
+ I ++ RHP VE AQD F+PN L RG ++TGPNM GKST++RQV +
Sbjct: 602 DESAGIRIDAGRHPVVERAQD--EFVPNPADLPRGS--VALVTGPNMSGKSTYMRQVALV 657
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
L+AQVGSFVP A + V D +F R+GA D G STFM+EM E IL AT SL+
Sbjct: 658 TLLAQVGSFVPAKSARLPVLDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATGDSLV 717
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
++DE+GRGTST DG +A A E L +E+ A TLFATH+H+LT A + A G
Sbjct: 718 LLDEVGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDRA---------G 768
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
V N H +A ++T L+ V G S+G+ VA+ A P SVV AR
Sbjct: 769 VFNLHFTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPASVVERAR 817
>gi|385809871|ref|YP_005846267.1| MutS family mismatch repair protein [Ignavibacterium album JCM
16511]
gi|383801919|gb|AFH48999.1| MutS family mismatch repair protein [Ignavibacterium album JCM
16511]
Length = 864
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 215/652 (32%), Positives = 333/652 (51%), Gaps = 43/652 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I Y+ YM LD + R L ++ S + + SL ++++T TA MG RLL W+ PL
Sbjct: 249 ISIYNPSDYMILDYSTKRNLEIITSMQEGTREGSLISILDKTQTA-MGGRLLKKWISAPL 307
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
DVN IN RL+ V+ + + +LR+DL LK I D+ERL+ + RA ++I+ + S
Sbjct: 308 RDVNAINQRLNAVENLIKEKSLRKDLINQLKEIGDLERLISKVCTGRANPREIIAVKTSL 367
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
++P ++ L + S ++ D L+ LT+ + K + S E G +
Sbjct: 368 KKIPVVKELL----NKLSDSTLKKVGDSLKDLTE--LVEKISDAIIDSPPASLTEGG--I 419
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I S + L L+ + I +L ++ +P +LK+ FG+ I+
Sbjct: 420 IKSGFSPELDELREIAFHGKEWISNLQQKERERTGIP---SLKVGFNNVFGYYIDISNAH 476
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
+ K+ +I +T + ++ +LK ++ E+ + +L N +
Sbjct: 477 ----KSKVPADYIRKQTLVNSERYITPELKTFEEKILHAEEKIGELEYQLFNEIRNLVAL 532
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE--AQ 639
+E ++ A ++ LDV LSFA+ A Y +P+++ + +I L+G RHP VE
Sbjct: 533 EAESIQTNARLIGMLDVFLSFAECAEEYN--YVKPEVDEGNEIEI-LQG-RHPVVERILS 588
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
F PNDCKL ++TGPNM GKS ++RQVG+ +L+AQ+GSFVP +A I +
Sbjct: 589 PGEKFTPNDCKLNNSDQQIILLTGPNMAGKSVYLRQVGLIVLLAQIGSFVPASKAKIGIV 648
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF RVGA D G STF+ EM E A+IL AT +SLI++DE+GRGTST+DG +AWA
Sbjct: 649 DRIFTRVGASDNITAGESTFLVEMQEAANILNNATSKSLILLDEIGRGTSTFDGISIAWA 708
Query: 760 ICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
I E+L E ++ A TLFATH+HEL +A + NY V + K+
Sbjct: 709 ITEYLHENPDVAAKTLFATHYHELNEMAD---------LFPRIKNYKV--EVREYDDKVI 757
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--DFTPSAVISDDAKIEVGS 875
L++V PG D S+GI VA A P V A+E LE + TP V K E
Sbjct: 758 FLHRVNPGRADHSYGIQVAMMAGLPVFVTNRAKEILNNLESKELTPYEV-----KKERLK 812
Query: 876 KRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
K K +D N +S + + E ++ L ++ EAL ++ +K +EK+
Sbjct: 813 KLKSETD-NQISLFEFKDDELRTEIKNLELNSLTPIEALNKLNELKRKMEKN 863
>gi|284108785|ref|ZP_06386450.1| DNA mismatch repair protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829859|gb|EFC34150.1| DNA mismatch repair protein [Candidatus Poribacteria sp. WGA-A3]
Length = 874
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 246/789 (31%), Positives = 390/789 (49%), Gaps = 71/789 (8%)
Query: 153 CTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDA- 211
C GL +DL+ +AEF + + L+ LG +E L+P + + K L
Sbjct: 143 CGFGLASIDLSTGQFLIAEFTEQDLMLD---ELIRLGPQEVLIPEQTDTIALDKLLAPLR 199
Query: 212 LTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPG--ALGALLSYAE 269
L R +T + F+ Q+ ++ G P D++ PG A G +L Y
Sbjct: 200 LPR----VTPQPSAHFELHA-SQEFLQVHFGVDRP--DVLGLSPEGPGVQAGGCILRY-- 250
Query: 270 LLSDESNYGNYYIRKYSL---DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTA 326
L + +++I+K L M LD+ MR L ++++ ++ +L ++++T TA
Sbjct: 251 LKQTQPTLEHHHIQKPELLEPTREMHLDAMTMRNLELVQTLNPDQEHATLLSILDQTVTA 310
Query: 327 GMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEK 386
MG RLL W+ +PL+D I RL+ V F+D+ LR +R LK + D+ERL +
Sbjct: 311 -MGSRLLRQWVVRPLIDNESIQRRLNAVSTFLDNLKLRLHVRSFLKDLHDLERLSSRIVI 369
Query: 387 RRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALV 446
A + +++L +S LP + +Q ++G I + L+ L L D L+ AL+
Sbjct: 370 GTATPRDVLRLKESLTILPKL---VQLFDG-----IADPLLNSL--LQRWDVLSDVTALI 419
Query: 447 ETSVDLDQLENGEYMISSS--YDTGLSALKNEQESLERQ-IHSLHKQTASDLDLPVDKAL 503
E S+D N + + G+ + +E ++ R + L + + +L
Sbjct: 420 EDSID----PNAPASVKEGPIFQNGVDPVIDELRTMSRNGVQWLTDLEQREREQSGIDSL 475
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
K+ FG+ F +TK ++ + + +T + ++T L+ + Q E+
Sbjct: 476 KIKYNQVFGYYFEVTKANLSRVPEYFRRK----QTLVNAERYTTQDLEGIEAQLSGANEK 531
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
+ ++E ++QT + +A ++ +DVL +FA++A+ Y +PD++ D
Sbjct: 532 LRRAEQERFQTMLQTLSGHVFRIQKMAKHVALMDVLSNFAEVAAR--NRYVKPDMH--DG 587
Query: 624 GDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
G I ++ RHP VE D FIPND L ++TGPNM GKSTF+RQ G+ +LM
Sbjct: 588 GIICIKNGRHPVVEQFDLPEGFIPNDSYLDFDAHRLLLLTGPNMAGKSTFLRQTGLIVLM 647
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
A +G FVP A I V D +F RVGA D G+STFM EMLETA IL+GAT RSLI++D
Sbjct: 648 AHMGCFVPASEAKIGVIDRLFTRVGASDNLALGLSTFMVEMLETAKILRGATSRSLILLD 707
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
E+GRGTSTYDG LAWAI EH+ + + A TLFATH+HE+T L E E GV
Sbjct: 708 EIGRGTSTYDGLSLAWAIAEHIQDRRILGARTLFATHYHEMTEL--ETFRE-------GV 758
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N V+ + + L K+ G +S+GIHV + A P +++ A+E A+LE T
Sbjct: 759 QNLTVA--VKEEKDDVIFLRKITQGKATRSYGIHVGKLAGLPSTLIARAQEVLAQLEQET 816
Query: 861 PSAVISDDAKIEVGSKRKRISDPNDMSRG--AARAHQFLKEFSDMPLETMDLKEALERVK 918
S S+ RI G + + H ++E + L M EAL R+
Sbjct: 817 ASE-----------SRSNRIYQQGLEHEGSFSPQPHPLIEEIKQLELFAMTPLEALNRLA 865
Query: 919 RMKDDLEKD 927
++ L+ +
Sbjct: 866 EIQKRLDAE 874
>gi|442771149|gb|AGC71844.1| DNA mismatch repair protein MutS [uncultured bacterium
A1Q1_fos_1877]
Length = 815
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 234/783 (29%), Positives = 378/783 (48%), Gaps = 79/783 (10%)
Query: 155 IGLGYVDL-TKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
IGL ++++ T R L L D + ++ L + ECL+P A + + R +
Sbjct: 76 IGLAWLEVSTGRFL-----LTDLEPSQLQDELARIRPAECLIPESAAQDGQLPMRRPDPS 130
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI----APGALGALLSYAE 269
++T R F + + L+ + GF++ A A GALL Y
Sbjct: 131 --SPVMTTRPDWCFAREEAKRLLNEHFGTKT------LEGFDVEDTPAVTAAGALLEYVR 182
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ + + +M +D A R+L + ++ D ++++L G+++ TCT MG
Sbjct: 183 ETQRTALPHIVRMEVWRRSRHMIIDEATRRSLELAQTLRDGRRDYTLLGILDETCTP-MG 241
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL WL PL D +I R D ++ F+ +LR D+R+ LK+ D++RL + R
Sbjct: 242 SRLLAEWLSSPLTDPEQITQRQDAIEEFLQQLSLRDDVRELLKQTYDLQRLTSRIATGRC 301
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
+ +V L ++ +LP +R+ L + + + +++R L H +A+V+
Sbjct: 302 SPRDLVCLARTLEQLPRLRAKLAERKSKRLQTLEQRI-----ELCPQAHEAITMAVVDEP 356
Query: 450 VDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
++ + G +I ++ L ++ RQ + ++ A +++ +LK+
Sbjct: 357 -PMNVTDGG--VIRPGFNAELDEFRDLMRG-GRQWMAQYQ--AKEIERTGISSLKIGFNK 410
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
FG+ +T ++ ++I +T K+ ++ +LK+ D+ + + K ++
Sbjct: 411 VFGYYLEVTAANSSRV----PPEYIRKQTLKNQERYITPELKEYEDKVLRAEDRAKALEQ 466
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL + TF + A ++E+DV+ A LA Y RP + + DI
Sbjct: 467 ELFTALRDQVATFVPLLLRTADSMAEIDVIAGLATLAGKA--GYCRPTLTAEPIMDI--R 522
Query: 630 GSRHPCVEA-QDWVNFIPNDCKL--------IRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
RHP ++ F+PND KL R QIITGPNM GKST+IRQ +
Sbjct: 523 DGRHPVLDRLLPAGQFVPNDVKLGLPCPEDDKRAIGRVQIITGPNMAGKSTYIRQAALIT 582
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFVP A I + D +FARVGA D RG STFM EM ETA IL AT RSL+I
Sbjct: 583 IMAQMGSFVPAKSAMIGIADRVFARVGASDELARGQSTFMVEMTETARILNSATSRSLVI 642
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
+DE+GRGTSTYDG LAWAI EHL +EI T+FATH+HELT L T +
Sbjct: 643 LDEIGRGTSTYDGISLAWAITEHLHDEIACRTMFATHYHELTDL---------TTTLKHA 693
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
AN++V+ + ++ + L+++ GA +S+GIHVA+ A P V A LED
Sbjct: 694 ANWNVA--VQESNEDVVFLHRIVEGAAGRSYGIHVAKIAGVPRLVTDRAATILQTLEDDH 751
Query: 861 PSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRM 920
++ D + +V P + R + L EF + PL LE ++R+
Sbjct: 752 ----VNADGRPKV---------PQRETTKQRRQQKSLFEFPEDPL--------LEEIRRL 790
Query: 921 KDD 923
+ D
Sbjct: 791 EVD 793
>gi|320529998|ref|ZP_08031074.1| DNA mismatch repair protein MutS [Selenomonas artemidis F0399]
gi|320137795|gb|EFW29701.1| DNA mismatch repair protein MutS [Selenomonas artemidis F0399]
Length = 861
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 234/686 (34%), Positives = 347/686 (50%), Gaps = 63/686 (9%)
Query: 260 ALGALLSY--AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
A+ ALL Y A +++D S S + M+LD+ +R L + S D K +LF
Sbjct: 223 AIAALLRYLHATVMADLSQINCLSFLDAS--AGMQLDTYTLRNLEITRSLRDGGKKHTLF 280
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
+++ T T MG RLL WL+ PLL + I+ARLD V V ++LR LR L+ I D
Sbjct: 281 DVLDFTRTP-MGTRLLKSWLEHPLLVPHRIDARLDAVAELVSASSLRGKLRDLLRSIYDF 339
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ +E + A + +V L S LP +R+AL G S L+ R + +E+ DD
Sbjct: 340 ERLLTRIETQSANARDLVALRVSLAALPGVRAALS---GAKSRLLM-RAAEGIETF--DD 393
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS----LHKQTAS 493
+A + L + G +I Y +E + L R H L +
Sbjct: 394 LRELLMAAIVDEPGLSVRDGG--IIRMGY-------SDELDELHRFSHDSKSLLQEMEER 444
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK- 552
+ + K LK+ FG+ + ++ +I +T + +F +LK+
Sbjct: 445 ERERTGIKTLKIGYNKVFGYYIEVRHSGSDRV----PADYIRKQTLANAERFITEELKEF 500
Query: 553 ----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASS 608
LG Q + V EY + EL +RV + V +++A M++ +DVL S A+ A+S
Sbjct: 501 ETKILGAQEKIVALEY-SLFAELRDRVKERLVPI----QNVARMIARVDVLQSMAEAAAS 555
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRGKSWFQIITGPN 665
Y RP I P G+II++ RHP VE +D F+PND L G + +ITGPN
Sbjct: 556 YR--YVRPVIRPASDGEIIIKDGRHPLVERLLERDL--FVPNDTHLSHGGTETMLITGPN 611
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST++RQV + LMAQVGSFVP A I+ D IF R+GA D + G STFM EM E
Sbjct: 612 MAGKSTYMRQVALLTLMAQVGSFVPARSAQIAPVDRIFTRIGASDDLVSGQSTFMVEMNE 671
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
A IL+ AT SL+I+DE+GRGTST+DG +A A+ EH+ I A TLFATH+HELT +A
Sbjct: 672 VAQILREATRDSLVILDEIGRGTSTFDGMSIARAVVEHIDTRIHAKTLFATHYHELTEMA 731
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
E + NY ++ + R + L ++ GA D+S+GIHVA A P V
Sbjct: 732 GER-----------IRNYCIA--VREKGRSVVFLRRIVAGAADKSYGIHVARLAGLPPKV 778
Query: 846 VTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS-DPNDMSRGAARAHQFLKEFSDMP 904
+ E+A E+ + ++ A VG + + + A L+E +
Sbjct: 779 M----ERAEEILNTLEQCAVTQRAAAAVGQPETDLPIAAEEPGMASLFAGGTLEELRGLD 834
Query: 905 LETMDLKEALERVKRMKDDLEKDAGD 930
+ TM EA+ + R+++ K+AG+
Sbjct: 835 VMTMTPLEAMNTLYRLQEQARKEAGE 860
>gi|435853699|ref|YP_007315018.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM
5150]
gi|433670110|gb|AGB40925.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM
5150]
Length = 878
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 269/870 (30%), Positives = 416/870 (47%), Gaps = 89/870 (10%)
Query: 24 FYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKN 83
++ N + FF D+Y ++A A+ T TA R G+G + + K+
Sbjct: 11 YFSIKDNYQEEILFFRLGDFYEMFAKDAQIAARELELTLTA-RNKGSGEETPMAGVPCKS 69
Query: 84 MFETIARDLLLERTDHTLELYEGSGSNWRLVKSG-----TPGNLGSYEDVLFANNEM--- 135
IA+ + + E E + LVK TPG + NN++
Sbjct: 70 AESYIAQLIEMGYKVAICEQVEDPKATSGLVKREVVRVVTPGTV--------VNNDLLED 121
Query: 136 QDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLL 195
+D + A+ N ++G G VD++ + + V L + E LL
Sbjct: 122 KDNNYLAAIIGN--QDG--FGFAVVDVSTGEFVTTQLDGPTQINKVIDELSRINPAEILL 177
Query: 196 PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGF- 254
+ ++ E D + +L++ K+ F T++ RL+ + V + GF
Sbjct: 178 DNKVEETEEIIEFID--NQLNPILSKTKEG-FTTKEAY----RLLTDQFDVVN--LEGFG 228
Query: 255 ----EIAPGALGALLSY-AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+A A GA+L + E N+ N + YS YM LD+ R L + ++ D
Sbjct: 229 CEELPLAIQAAGAILDFLVETQKRSLNHINQ-LATYSTTDYMVLDANTRRNLELTQTMRD 287
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
+K SL ++++T TA MG R L W++QPLL+++ I RLD V+ + +++L++
Sbjct: 288 KSKRGSLLWVLDQTVTA-MGGRKLKKWVEQPLLELDRIEYRLDAVEEITKNIFAKEELKE 346
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
L + DIERL+ + A + ++ L S LP ++ L Q++
Sbjct: 347 LLTEVYDIERLLGKIIYGSANARDLISLKSSLHILPEVKEVLDQFKTP-----------K 395
Query: 430 LESLTDD-DHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIH 485
L+ L D+ D L L+E S+ D L G +I YD L L E+ ++ I
Sbjct: 396 LKKLQDNLDKLEDVACLIENSIKEDPPTTLTEGS-IIKKGYDNQLDELLEAMENGKQWII 454
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
L KQ + +LK+ G+ +TK + + ++ +T + ++
Sbjct: 455 DLQKQERERTGI---SSLKVGHNKVHGYYIEVTKANLDAVPE----DYVRKQTLSNSERY 507
Query: 546 TNTKLKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLL 600
+LK LG Q EYK E+ ++V Q +E + AT+L++LD LL
Sbjct: 508 ITPELKDKESVILGAQENSKELEYK-LFVEIRDKVAQE----TERIQKSATILAQLDALL 562
Query: 601 SFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQ 659
S A++A YT+P +N D DI E RHP VE F+PND L + F
Sbjct: 563 SLAEVA--LNNDYTKPQLNTDDQIDI--EAGRHPVVEEMMEEEVFVPNDTYLDQQSDRFG 618
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
IITGPNM GKST++RQV + +L+AQ+GSFVP D+A +S+ D IF RVGA D G STF
Sbjct: 619 IITGPNMSGKSTYMRQVALIVLLAQIGSFVPADKAKLSIVDRIFTRVGASDDLTTGQSTF 678
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATH 777
M EM E A+IL AT SLII+DE+GRGTSTYDG +AWA+ E++ E+I A +LFATH
Sbjct: 679 MVEMNEVANILNNATANSLIILDEVGRGTSTYDGLSIAWAVTEYISNPEKIGAKSLFATH 738
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
+HELT L +++ GV NY+V+ + + L+K+ PG +QS+GI VA+
Sbjct: 739 YHELTELE---------ERLPGVRNYNVA--VKEEGDDVVFLHKIIPGEANQSYGIEVAK 787
Query: 838 FANFPESVVTLAREKAAELEDFTPSAVISD 867
A P V ++E LE+ V D
Sbjct: 788 LAGVPSEVTNRSKEILDWLEEEEDKKVTED 817
>gi|331001789|ref|ZP_08325311.1| DNA mismatch repair protein MutS [Lachnospiraceae oral taxon 107
str. F0167]
gi|330412763|gb|EGG92146.1| DNA mismatch repair protein MutS [Lachnospiraceae oral taxon 107
str. F0167]
Length = 882
Score = 301 bits (770), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 224/704 (31%), Positives = 351/704 (49%), Gaps = 79/704 (11%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+S F A + GA+L Y + S I Y YM +D+A+ R L ++E+ +
Sbjct: 226 LSEFLDATISSGAMLRYLHEMQKSSCAQIVGISAYKNGDYMIVDTASRRNLELVETMREK 285
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
K+ SL G++++T TA MG R+L +L+QPL++ +I R D V D R++LR++
Sbjct: 286 KKSGSLLGVLDKTNTA-MGARMLRSFLEQPLVNREKIIGRQDAVAELFDRYIDREELREY 344
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L + D+ERLM + + A + ++ L S + I+ L+ +E + E LD L
Sbjct: 345 LNPVYDLERLMSRVVTKSANTRDLLSLSASMKMISPIKDVLKTFEAKEIKRTDEN-LDRL 403
Query: 431 E--------SLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
E ++ +D L+ L+ G +I++ Y+ + L+ + +
Sbjct: 404 EDIIDIIDRAINEDSPLS--------------LKEGN-IINTGYNAEIDKLRQAKTEGKN 448
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
+ SL + + K LK+ FG+ F +T + + F+ +T +
Sbjct: 449 WLASLESEEKEKTGI---KNLKIKFNKVFGYYFEVTNS----FKNMVPDYFVRKQTLTNA 501
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
++T KLK L + ++ + + E+ V + +S A ++ +D + S
Sbjct: 502 ERYTTDKLKDLENIILGAEDKLNSLEYEIFVEVREEIANNVNRIQSSAKSIAYIDAICSL 561
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQII 661
A +A + Y RP+IN + DI + RHP VE +FI ND L + K II
Sbjct: 562 ATVAYN--NNYARPEINTTGIIDI--KDGRHPVVETMLKDDSFIVNDTYLDQNKKRMSII 617
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST++RQ + +MAQ+GSFVP +AS+ V D IF RVGA D G STFM
Sbjct: 618 TGPNMAGKSTYMRQTALICMMAQIGSFVPAKKASLCVCDRIFTRVGASDDLASGQSTFMV 677
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFH 779
EM E A+IL+ AT SL+I+DE+GRGTST+DG +AWA+ EH+ V+ I A TLFATH+H
Sbjct: 678 EMTEVANILRNATRNSLVILDEIGRGTSTFDGLAIAWAVVEHISNVKLIGAKTLFATHYH 737
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
EL+ L + GV NY +S + + L K+ G D+S+GI VA+ A
Sbjct: 738 ELSELEG---------TLPGVNNYCIS--VKENGDNIVFLRKIITGGADKSYGIQVAKLA 786
Query: 840 NFPESVVTLARE------------KAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMS 887
PESV A+E KA E+ + TP+A SKRK + N++
Sbjct: 787 GVPESVTNRAKELIEELSGADIATKAREIAEATPTA-----------SKRKPVKKMNEVE 835
Query: 888 RG------AARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLE 925
G A +KE SD+ + TM +AL + +++ ++
Sbjct: 836 AGQLSLFDAVNNDTIIKEISDIDITTMTPMDALNTLYALQNKIK 879
>gi|374581420|ref|ZP_09654514.1| DNA mismatch repair protein MutS [Desulfosporosinus youngiae DSM
17734]
gi|374417502|gb|EHQ89937.1| DNA mismatch repair protein MutS [Desulfosporosinus youngiae DSM
17734]
Length = 850
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 241/772 (31%), Positives = 376/772 (48%), Gaps = 81/772 (10%)
Query: 156 GLGYVDLTKRVLGLAEFLD-DSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
GL ++DL+ + + D D T V + E LLP + K +
Sbjct: 133 GLAFLDLSTGEFTIFQTTDQDVLLTEV----ARINPAEVLLPPDLTKKPKL--------W 180
Query: 215 CGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYA-ELLSD 273
G T R + FK D+ +R E R+L F IA A L +Y E L
Sbjct: 181 AGYYCTVRDRQTFK--------DQTMRDHFEGQRELFQEFPIAAQAAAGLWNYILETLPG 232
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
I+ Y + +M LD R L + ES A K +L +++ T TA G RLL
Sbjct: 233 VDPTHIVEIKTYRSERWMFLDQWTRRNLELTESLRGAGKKGTLLSVLDLTQTA-FGGRLL 291
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
W+ +PLL +EI RL+ V+ V D+ LR+DL++ L + D+ERLM + A +
Sbjct: 292 KHWIDKPLLRQDEIEGRLNSVEELVSDSFLRKDLQKLLSEVYDLERLMGKVSYGTANAKD 351
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
++ L Q+ LP IR+ ++ + +K R L D D F+ ++++++ +
Sbjct: 352 LLSLTQTLALLPEIRTL---FDSSSAESLKVR-------LPDLDGFEPFVTKLQSALNSN 401
Query: 454 ---QLENGEYMISSSYDTGLSALK----NEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
L+ G +I + Y + L+ +E L + +S ++T ++LK+
Sbjct: 402 PPLSLKEGN-IIKTGYSQEVDELRLISAGGKEWLAQLENSERERTGI-------RSLKIG 453
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
FG+ IT I + + +T + +F +LK+ + E+ K+
Sbjct: 454 YNKVFGYYIEITHANAHLI----PSDYQRKQTLSNAERFITPELKEYELKIIGAEEKLKD 509
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI 626
+ EL+ + + ++ A +L+E+DV +S A+ ++ Y RP + D I
Sbjct: 510 LEYELILALREEVRRNTKRIIRAAQVLAEIDVFVSLAE--AAVRNHYVRPQLKK-DGQII 566
Query: 627 ILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
I+EG RHP VE + F+PND + G +ITGPNM GKST++RQV + +LMA +
Sbjct: 567 IIEG-RHPVVEEMLEQGAFVPNDTHM-SGSQHLALITGPNMAGKSTYMRQVALIVLMAHM 624
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
GSFVP ++ASI++ D IF RVGA D G STFM EM E A IL A+ SLII+DE+G
Sbjct: 625 GSFVPANKASIALVDRIFTRVGASDDLAAGQSTFMVEMQEVAHILNYASKNSLIILDEIG 684
Query: 746 RGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANY 803
RGT+TYDG +AWA+ EHLV+ + TLFATH+HELT L E G+ N
Sbjct: 685 RGTATYDGLSIAWAVAEHLVQDPQFNPKTLFATHYHELTQLQDE---------FPGLFNL 735
Query: 804 HVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
HV + + L+K+ PG D+S+GI VA A P ++ A+ +LE P+
Sbjct: 736 HVG--VKERGEDIVFLHKILPGRADRSYGIQVARLAGLPHDLIQRAKTLLLKLESSEPAH 793
Query: 864 VISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALE 915
++ + EV ++ P + H L+E +PL+ M ++AL+
Sbjct: 794 TLAKPS--EVITQFTLFDVP--------QTHPLLQEIETLPLDDMTARQALQ 835
>gi|389575732|ref|ZP_10165760.1| DNA mismatch repair protein MutS [Eubacterium cellulosolvens 6]
gi|389311217|gb|EIM56150.1| DNA mismatch repair protein MutS [Eubacterium cellulosolvens 6]
Length = 878
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 214/670 (31%), Positives = 338/670 (50%), Gaps = 37/670 (5%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+ F A GAL SY + I Y D YM LDS+ R L ++E+ +
Sbjct: 226 IDDFNCGTIAAGALFSYLYETQKTNMDQMTAITPYFSDRYMLLDSSTRRNLELVETLREK 285
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
K SL G+++RT TA MG R+L +++QPL++ +EI RL V+ V +R ++R++
Sbjct: 286 QKRGSLLGVLDRTKTA-MGARMLRSFVEQPLINKDEIEKRLTAVEELVKMPMIRDEIREY 344
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L+ + D+ERL + + A + ++ S LP+IR L +EG+ I+E LDPL
Sbjct: 345 LQPVYDLERLASRITYQSANPRDLIAFKTSLEMLPFIRQLLSGFEGEQIREIREN-LDPL 403
Query: 431 ESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
E L D A + L E G +I Y+ + + + +++ ++ + L +
Sbjct: 404 EDLYD-----AVQAAIIDDPPLAMKEGG--IIRDGYNEMVDSFREAKKNGQKWLSDLEAE 456
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+ K L++ FG+ +T + K+ +++ +T ++T +L
Sbjct: 457 EREKTGI---KTLRVKYSRVFGYCIEVTNS----FKDKVPEEYMRKQTLTGSERYTTVRL 509
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
K++ +Q + + + EL + V T + A ++ LDV SFA ++
Sbjct: 510 KEIEEQIVGAEDRLGSLEYELFSEVRNTIAQNVARVQKTAQAIAALDVFCSFAYISER-- 567
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGK 669
Y RP +N G + ++ RHP VE + FI ND L + +ITGPNM GK
Sbjct: 568 NRYVRPKLNKS--GKLDIKEGRHPVVERMIPDDLFIANDTYLDQNDHRVAVITGPNMAGK 625
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST++RQ + +LMAQ+G FVP A+I + D IF RVGA D G STFM EM E A+I
Sbjct: 626 STYMRQSALIVLMAQIGCFVPAASANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANI 685
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHE 787
L+ AT SL+I+DE+GRGTST+DG +AWA+ E + + +I A TLFATH+HELT L
Sbjct: 686 LRNATGNSLLILDEIGRGTSTFDGLAIAWAVTEFVADTKKIGAKTLFATHYHELTELEG- 744
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
++ GV NY ++ + + L K+ G D+S+GI VA A PE V+
Sbjct: 745 --------KIAGVHNYCIA--VKEKGDDIVFLRKIVQGGADKSYGIQVARLAGVPEPVLA 794
Query: 848 LAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS--DPNDMSRGAAR-AHQFLKEFSDMP 904
A++ +L +A +SD A + K+ D MS R ++ + E ++
Sbjct: 795 RAKDLVEQLSKADITAAVSDIASTKKKVKKTHYDTVDMQQMSLFDTRDDNRIIDEIKELD 854
Query: 905 LETMDLKEAL 914
+ TM EA+
Sbjct: 855 ISTMTPLEAM 864
>gi|385799933|ref|YP_005836337.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM
2228]
gi|309389297|gb|ADO77177.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM
2228]
Length = 868
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 248/850 (29%), Positives = 408/850 (48%), Gaps = 74/850 (8%)
Query: 25 YKTLPNDTR-AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSV---SV 80
Y L N + ++ FF D+Y G++A AK TA + G ++ V S
Sbjct: 11 YHDLKNKYQDSILFFRLGDFYEMFGQDAKKAAKILDIALTARNKGGGEKIPMAGVPYHSA 70
Query: 81 SKNMFETIARDLLLERTDHTLELYEGSGSNWR-LVKSGTPGNLGSYEDVLFANNEMQDTP 139
+ + + I + + + + SG R +++ TPG + E+ + A NE
Sbjct: 71 ASYIEKLIKNGIKVAICEQLEDPSASSGIVKRDVIRVVTPGTV--IENEILAENE---NN 125
Query: 140 VIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEA 199
+ A F + G G Y D++ L EF S ++ + + +E LL +
Sbjct: 126 YLAAAF----KYGNYYGFSYTDISTGEFYLTEF-PASETDKLKDEINRISPREILLDQKI 180
Query: 200 VKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVR-DLVSGF---- 254
++ K L++ +L +K DRL +G ++ + + GF
Sbjct: 181 AQTKLIKELQNIYNFTLNILENKK------------YDRLYQGILDHFQLKSLEGFGCEE 228
Query: 255 -EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
+ A A G +L+Y + ++ Y L+ YM LDSA+ R L + + D ++
Sbjct: 229 MKAAVYAAGQVLAYLGDTQKRTINQITLLKAYHLEDYMVLDSASRRNLELTATIRDNQRS 288
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL ++++T T+ MG R + W+ QPL+ I R ++ +D+ + LR L
Sbjct: 289 GSLLSIIDQTVTS-MGGREIKKWINQPLIQKKAIEQRHTALEEIIDNYQVLDKLRAELNE 347
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
I D+ER+M + + A + +V L S +LP + + +Q + ++ ++ D LE +
Sbjct: 348 IYDLERIMSKITYQSANARDLVALKNSLAKLPAVENLMQNLKSDLIIEMQTKF-DLLEDM 406
Query: 434 TDDDHLNKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
D L+E ++ + E G +I+S Y++ L L++ S + I L K
Sbjct: 407 HD---------LIEKAIKSEPPTTITEGG--IIASDYNSSLDQLRDLVSSGKDWITKLQK 455
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ + LK+ FG+ +T K+ ++ + +T + ++ K
Sbjct: 456 EEREKTGI---NTLKVGFNKVFGYYLEVTNSHTDKVPERYERK----QTLSNSERYIIPK 508
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
LK+ + E+ + + +L + + E A ++++LDVLL+F+ LA
Sbjct: 509 LKEKEAEVLGAEEKINDLEHKLFIEIREKIAQEVERINQTAAVIAQLDVLLAFSYLA--I 566
Query: 610 PTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
YT+P++N I ++ RHP VE F+PNDC L + + F IITGPNM GK
Sbjct: 567 ENNYTKPEVNNGPA--IKIKNGRHPVVEKMFTEQFVPNDCYLDQTEQRFVIITGPNMSGK 624
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST++RQV + +LMAQVGS+VP + A I + D IF RVGA D G STFM EM E A+I
Sbjct: 625 STYMRQVALIVLMAQVGSYVPAEEALIGLTDRIFTRVGASDDLTTGQSTFMVEMNEVANI 684
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHE 787
+ +T++SLII+DE+GRGTSTYDG +AW++ E+L E I A TLFATH+HELT L E
Sbjct: 685 VNNSTEKSLIILDEVGRGTSTYDGVSIAWSVSEYLNNPERIGARTLFATHYHELTRLEDE 744
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
G+ NY+V D + L+++ G D S+GI VA A PE ++
Sbjct: 745 YP---------GIKNYNVLVEEDKNG--VHFLHRIIEGRADDSYGIEVARLAGLPEEIII 793
Query: 848 LAREKAAELE 857
A++ LE
Sbjct: 794 SAQKILNRLE 803
>gi|315651393|ref|ZP_07904418.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
gi|315486352|gb|EFU76709.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
Length = 880
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 222/687 (32%), Positives = 347/687 (50%), Gaps = 47/687 (6%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+S F A A GA+L Y + S I Y YM +D+++ R L ++E+ +
Sbjct: 226 LSEFTYATIASGAMLRYLYEMQKSSCAQIVSISAYKNGDYMIVDTSSRRNLELVETMREK 285
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
KN SL G++++T TA MG R+L +L+QPL++ I R + V + R++LR++
Sbjct: 286 KKNGSLLGVLDKTSTA-MGARMLRSFLEQPLINRERILNRQEAVAELFERYIDREELREY 344
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L + D+ERLM + + A + ++ L S + I+ L I E LD L
Sbjct: 345 LSPVYDLERLMARVVTKNANTRDLLSLSASMKMIAPIKEVLNNCTSGEIVKINEG-LDRL 403
Query: 431 ESLTDDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
E + D +++ +V+ D L+ G +I + Y+ + L+ + + + SL
Sbjct: 404 EDIID---------IIDRAVNEDSPLSLKEGN-IIKTGYNVEIDKLRQAKTEGKNWLASL 453
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
+ K LK+ FG+ F +T + + F+ +T + ++T
Sbjct: 454 EADEKEKTGI---KNLKIKYNKVFGYYFEVTNS----FKDMVPDYFVRKQTLTNAERYTT 506
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
KLK+L + ++ N + E+ V T +S A L+ +D + S A +A
Sbjct: 507 DKLKELENIILGAEDKLNNLEYEVFTEVRDTVADNVNRIQSSAKSLAYIDAICSLATVAY 566
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNM 666
+ YTRP IN V DI + RHP VE+ + FI ND L + K IITGPNM
Sbjct: 567 N--NNYTRPQINTNGVIDI--KDGRHPVVESMLGDDSFIANDTYLDQNKKRMSIITGPNM 622
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST++RQ + +MAQ+GSFVP +AS+ V D IF RVGA D G STFM EM E
Sbjct: 623 AGKSTYMRQTALICMMAQIGSFVPASQASLCVCDRIFTRVGASDDLASGQSTFMVEMTEV 682
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTAL 784
A+IL+ AT SL+I+DE+GRGTST+DG +AWA+ EH+ ++ I A TLFATH+HEL+ L
Sbjct: 683 ANILRNATRNSLVILDEIGRGTSTFDGLAIAWAVVEHISNIKLIGAKTLFATHYHELSEL 742
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
+ GV NY + + + L K+ G D+S+GI VA+ A PES
Sbjct: 743 EG---------TLPGVNNYCI--LVKERGDNIVFLRKIVTGGADKSYGIQVAKLAGVPES 791
Query: 845 VVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG------AARAHQFLK 898
V A+E EL + + A+ V SKRK + P+++ G A ++
Sbjct: 792 VTERAKELIEELSGADIATRAREIAEAAV-SKRKPVKRPDEVESGQLSLFDAVNNDSIIE 850
Query: 899 EFSDMPLETMDLKEALERVKRMKDDLE 925
E S + + +M +AL + +++ ++
Sbjct: 851 EISKIDITSMTPMDALNTLYALQNKIK 877
>gi|225847846|ref|YP_002728009.1| DNA mismatch repair protein MutS [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644744|gb|ACN99794.1| DNA mismatch repair protein MutS [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 855
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 41/578 (7%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ Y D YM+LD + ++ L ++ S+ N SL ++N+ T GMGKR + L PLL
Sbjct: 251 KPYREDKYMKLDYSTIKHLELVSSQ---EHNPSLLSVINKAIT-GMGKRKIKFMLLHPLL 306
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
++ EI R D ++ + LR+++RQHL ++ DIERL+ + + +V L +S
Sbjct: 307 NIQEIKDRQDAIEELTQNHTLREEIRQHLDKVYDIERLVAKITSNTLTPKDMVALRESLK 366
Query: 403 RLPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
++ I+ + S L+K L+P L D K +E + E G
Sbjct: 367 KVKDIKKLSPK-----SKLLKNIVDSLNPHTQLVD-----KLERYLEDNPPFHLKEGG-- 414
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+I D L LK+ +E+ E I +Q + +LK+ G+ ITK
Sbjct: 415 LIKKGVDERLDELKSLKENAEEIIRQYQEQEREKTKI---SSLKIGFNKVMGYYIEITK- 470
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
P + K + + +T + +FT L++L D+ E+ K + E+ +V + V
Sbjct: 471 --PNL-KLVPPYYKRKQTLSNAERFTTDYLQQLEDKILSADEKIKALEYEIFTQVREEVV 527
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQD 640
S + A +L LD L A +A + RP I+ + + +E HP V A
Sbjct: 528 NHSFEIEETARLLGYLDALAGLAQVA--VEKSWIRPQIH--NGYHLFIEEGYHPTV-ANF 582
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
+F+PN + +F IITGPNM GKST+IRQV + +++Q+GSF+P A ISV D
Sbjct: 583 SKDFVPNSVYFDENR-FFHIITGPNMSGKSTYIRQVALLTILSQIGSFIPASSAQISVVD 641
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
++ R+G+GD +G+STFM EMLE A+IL AT SLI++DE+GRGTSTYDG +AWA+
Sbjct: 642 AVYTRIGSGDNLAKGLSTFMVEMLEVANILNNATKNSLIVLDEVGRGTSTYDGIAIAWAV 701
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E++ + I+A TLF+TH+HELT L Q+ GV N+++S D ++ LY
Sbjct: 702 SEYISKNIKAKTLFSTHYHELTQLE---------SQLRGVKNFYLSIKEDQNG-EIRFLY 751
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
KV G D+S+GIHVA+ A P+SV+ A+E +LE+
Sbjct: 752 KVMEGFVDKSYGIHVAQLAGLPKSVIERAKEILLDLEN 789
>gi|313896675|ref|ZP_07830223.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 137
str. F0430]
gi|312974592|gb|EFR40059.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 137
str. F0430]
Length = 869
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 235/687 (34%), Positives = 352/687 (51%), Gaps = 65/687 (9%)
Query: 260 ALGALLSY--AELLSDESNYGNYYIRKYSLDSY--MRLDSAAMRALNVLESKTDANKNFS 315
A+ ALL Y A +++D S R LD+ M+LD+ +R L + S D K +
Sbjct: 231 AIAALLRYLHATVMADLSQIN----RLSFLDAAAGMQLDTYTLRNLEITRSLRDGGKKHT 286
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
LF +++ T T MG RLL WL+ PLL + I+ARLD V V ++LR LR+ L+ I
Sbjct: 287 LFDVLDFTRTP-MGTRLLKSWLEHPLLAPHRIDARLDAVAELVSASSLRAKLRELLRSIY 345
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD 435
D ERL+ +E + A + +V L S LP +R+AL G S L+ R + +E+
Sbjct: 346 DFERLLTRIETQAANARDLVALRVSLAALPGVRAALS---GAKSRLLT-RAAEGIETF-- 399
Query: 436 DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSAL---KNEQESLERQIHSLHKQTA 492
DD +A + L + G +I Y L L ++ +SL +++ H++
Sbjct: 400 DDLRELLMAAIVDEPGLSVRDGG--IIRMGYSDELDELHRFSHDSKSLLQEMEE-HERDR 456
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+ + K LK+ FG+ + ++ +I +T + +F +LK+
Sbjct: 457 TGI-----KTLKIGYNKVFGYYIEVRHSGSDRV----PADYIRKQTLANAERFITEELKE 507
Query: 553 -----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
L Q + V EY + EL +RV + V +++A M++ +DVL S A+ A+
Sbjct: 508 FETKILSAQEKIVALEY-SLFAELRDRVKERLVPI----QNVARMIARVDVLQSMAEAAA 562
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRGKSWFQIITGP 664
S Y RP I P G+II++ RHP VE +D F+PND L G + +ITGP
Sbjct: 563 SYR--YVRPVIRPASDGEIIIKDGRHPLVERLLERDL--FVPNDTHLSHGGTETMLITGP 618
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + LMAQVGSFVP A I+ D IF R+GA D + G STFM EM
Sbjct: 619 NMAGKSTYMRQVALLTLMAQVGSFVPARSAEIAPVDRIFTRIGASDDLVSGQSTFMVEMN 678
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
E A IL+ AT SL+I+DE+GRGTST+DG +A A+ EH+ I A TLFATH+HELT +
Sbjct: 679 EVAQILREATRDSLVILDEIGRGTSTFDGMSIARAVVEHIDTRIHAKTLFATHYHELTEM 738
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
A+E + NY ++ + R + L ++ GA D+S+GIHVA A P
Sbjct: 739 ANER-----------IRNYCIA--VREKGRGVMFLRRIVAGAADKSYGIHVARLAGLPPK 785
Query: 845 VVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS-DPNDMSRGAARAHQFLKEFSDM 903
V A E LE + ++ A G + + + A L+E +
Sbjct: 786 VTERAEEILGTLE----ACAVTQRAAAAAGQPETDLPIAAEEPGMASLFAGGTLEELRGL 841
Query: 904 PLETMDLKEALERVKRMKDDLEKDAGD 930
+ TM EA+ + R+++ K+AG+
Sbjct: 842 DVMTMTPLEAMNTLYRLQEQARKEAGE 868
>gi|83815782|ref|YP_445727.1| DNA mismatch repair protein MutS [Salinibacter ruber DSM 13855]
gi|123528693|sp|Q2S254.1|MUTS_SALRD RecName: Full=DNA mismatch repair protein MutS
gi|83757176|gb|ABC45289.1| DNA mismatch repair protein MutS [Salinibacter ruber DSM 13855]
Length = 908
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 298/586 (50%), Gaps = 47/586 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I++YS D ++ LD R L +++S D +L +++ T T MG R L WL +PL
Sbjct: 266 IKRYSKDEHIALDPETKRNLELVQSIQDDGHEGTLVSILDETETP-MGGRRLRAWLVRPL 324
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
DV I RLD V+A VDD LR DLR+ L ++ D+ERL + RA ++ + +
Sbjct: 325 RDVGRIRHRLDAVEACVDDRTLRDDLREELNQMGDLERLAGKVATGRAAPGDLIAIKHTL 384
Query: 402 IRLPYIRSALQQYEGQFSSLIKE------RYLDPLESLTDDDHLNKFIALVETSVDLDQL 455
RLP + L + I++ +D ++S DD K
Sbjct: 385 RRLPNVLGLLTDADSDALGAIEDDLRSCPEMVDRIQSALVDDPPAKIS------------ 432
Query: 456 ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
E G +I Y L L+ + + + +L + + D+P +LK+ FG+
Sbjct: 433 EGG--LIRDGYSEELDELRTIAQEGKDWVANLETEESERTDIP---SLKVGFNKVFGYYI 487
Query: 516 RITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
+T K+ + +I +T D ++ +LK++ ++ E+ + ++EL N +
Sbjct: 488 EVTNTHADKVPE----DYIRKQTLVDSERYVTPELKEMEEKILTAEEKIETLEQELFNEL 543
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ I + A +L+ LD A++A YTRP ++ D I +E RHP
Sbjct: 544 RSQIAQQTGILQENAELLAHLDCFAGLAEVAEQHD--YTRPSVD--DGLTIDIEEGRHPV 599
Query: 636 VEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE FIPND L IITGPNM GKS +RQVG+ +L+AQVGSFVP +
Sbjct: 600 VEQTLPPGDPFIPNDMALDPDDEQVLIITGPNMAGKSVALRQVGLIVLLAQVGSFVPAEA 659
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A I V D IF RVGA D G STF+ EM E A+IL AT RSLI+ DE+GRGTST+DG
Sbjct: 660 AQIGVVDRIFTRVGASDNLAAGESTFLVEMNEAANILNNATARSLILFDEVGRGTSTFDG 719
Query: 754 FGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
+AWAI E+L E E+ A TLFATH+HEL A+A ++ V NY + +
Sbjct: 720 LSIAWAIVEYLHERPEVAARTLFATHYHELNAMA---------DRLERVHNYRI--QVSE 768
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ L K+ PG D S+GI VA+ A P++V+ ARE LE
Sbjct: 769 HEGEIVFLRKLIPGGADHSYGIEVAKMAGLPDAVIARAREVLQNLE 814
>gi|91201084|emb|CAJ74142.1| strongly similar to DNA mismatch repair protein MutS [Candidatus
Kuenenia stuttgartiensis]
Length = 870
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 265/925 (28%), Positives = 448/925 (48%), Gaps = 88/925 (9%)
Query: 25 YKTLPNDTR-AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKN 83
Y + D + A+ FF D+Y E+A +K T T+ + G +A+ + +
Sbjct: 11 YNEIKKDHKDALLFFRMGDFYELFFEDAKIASKILGITLTSRSK---GENAVPMAGIPHH 67
Query: 84 MFETIARDLLLERTDHTL---ELYEGSGSNWRLVKSG-----TPGNLGSYEDVLFANNEM 135
E+ R L+ + H + E + G +V G TPG + ED L +
Sbjct: 68 ASESYTRKLI--KAGHKVAICEQLQDPGEAKGIVDRGVIRIITPGTVT--EDALL---DG 120
Query: 136 QDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLL 195
++ ++AL+ ++ GL ++DL+ + + ++ F L L E +L
Sbjct: 121 KNNNYLLALW----KDKEIFGLSWIDLSTGKFEIEDIREERLF----DELARLNPSEIVL 172
Query: 196 PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL-DRLVRGSVEPVRDLVSGF 254
P + +S+ T R T C M+T EF Q L + S+E GF
Sbjct: 173 PDDITESNATFTQR-IRTECNAMITPLPAWEFSESTGYQALLEHFGTHSLE-------GF 224
Query: 255 -----EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+A GA GA+L Y + S I+KY ++ + +D A ++L + ++ +
Sbjct: 225 GCQDAGVALGAAGAILHYLKETQKTSLKHIAKIQKYETNNRVIMDRATQQSLELTQTIRN 284
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
N+ SL G +++T T MG RLL W+ PL + +EI R V+ F + LR+++
Sbjct: 285 KNREGSLLGALDQTKTP-MGARLLKDWVISPLKNHDEIKYRQLGVREFTEKPELRREIIA 343
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI--KERYL 427
L I DIER+ + RA + ++ L QS +LP ++ L + +++I +E+ +
Sbjct: 344 ILHDIYDIERIAAKVSCGRANARDLISLQQSLSKLPELKEKLDFF---ITAIISDREKEI 400
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQI 484
DPL+ L L+ ++ LD L+ G +I YD L L+ ++ ++ I
Sbjct: 401 DPLDELR---------TLIGMAISLDSPHSLKEGG-IIKEGYDAALDELRYISKNGKQWI 450
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
+ + ++ +LK+ FG+ IT R+ + +I +T K+ +
Sbjct: 451 AHFQAEEIARTNI---NSLKVGYNKVFGYYIEITNTH----RENIPPAYIRKQTLKNAER 503
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
+ +LK+ + E K+ + +L ++ A TF++ + ++ ++++DVL + A
Sbjct: 504 YITPELKEYETKVLTAEERAKDLEYDLFIQLRDKAGTFTKQLQGISEAIAQIDVLSTLAK 563
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITG 663
+A Y P+I D ++ + HP + + D F+PND L + +ITG
Sbjct: 564 IA--VENRYAMPEIT--DSLELNINDGCHPVLTMELDRERFVPNDINLDGVQDKTMVITG 619
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST+IRQ + ++MAQ+GSF+P A+I D IFARVGA D +G STFM EM
Sbjct: 620 PNMAGKSTYIRQTALLVIMAQMGSFIPAKNATIGTVDRIFARVGASDELSKGQSTFMVEM 679
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
ETA+IL AT+RSLII+DE+GRGTST+DG +AWAI E++ + I A TLFATH+HELT
Sbjct: 680 NETANILNNATERSLIILDEVGRGTSTFDGISIAWAITEYIYQNIGARTLFATHYHELTE 739
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
L + G+ N++V+ + ++ L K+ G D+S+GIHVA A P+
Sbjct: 740 L---------SLLFSGIKNFNVA--VKEWGEEIIFLRKIVAGGTDKSYGIHVARLAGIPK 788
Query: 844 SVVTLAREKAAELEDFTPSAVISDDAKIEVGS-KRKRISDPNDMSRGAARAHQFLKEFSD 902
++ AR LE +A + + K + K + P A++ + E
Sbjct: 789 QIIQRARSILNNLE----AATLDINGKPKFAPLKTDHVKKPRQRKLFASKEDLVIDEIKK 844
Query: 903 MPLETMDLKEALERVKRMKDDLEKD 927
+ L+ + +AL ++ +K L +D
Sbjct: 845 LSLDEIAPADALNKLAELKKRLYED 869
>gi|333370923|ref|ZP_08462893.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
gi|332976873|gb|EGK13695.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
Length = 890
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 307/596 (51%), Gaps = 33/596 (5%)
Query: 264 LLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRT 323
LLSY + IR+Y + +M LD +A + L + S + K +L+GL++RT
Sbjct: 257 LLSYLQRTQKRGLSHMNRIRRYDAEQFMVLDVSARQTLELTRSLREGRKEGTLYGLLDRT 316
Query: 324 CTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHN 383
TA MG RLL WL +PLLD+NEI R + +QA D L +++R+ LK + D+ERL
Sbjct: 317 ATA-MGSRLLKKWLDKPLLDLNEIRRRQEEIQALTDHLILLEEIREQLKGVYDLERLCAR 375
Query: 384 LEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK-ERYLDPLESLTDDDHLNKF 442
+ A + ++ L +S ++P ++ L E S+L+ LDPL+ + + L
Sbjct: 376 IAYGSANGRDLISLRRSLEKIPDLKRCLS--ETNASALVSVAEGLDPLQEVVE---LTAK 430
Query: 443 IALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
E V + + +I YD L L+ Q I L ++ + ++
Sbjct: 431 SIADEAPVSVREGN----LIKDGYDEELDRLREVQRDGRGWITRLEQREREATGI---RS 483
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
LK+ FG+ +TK +R ++ +T + +F +LK+ + E
Sbjct: 484 LKVGFNKVFGYYIEVTKA---NLRHLPEGRYQRKQTLANAERFVTPELKERERLILEAEE 540
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
+ + +L RV + + LA ++ LD L S A A S Y RPD+N
Sbjct: 541 KSVELEYQLFTRVRERVAEEIPRIQMLADRVARLDALHSLA--AVSGKYGYVRPDVNRE- 597
Query: 623 VGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
G I + G RHP VEA F+PND ++ + + +ITGPNM GKST++RQV + L
Sbjct: 598 -GRIRITGGRHPVVEAATREGEFVPNDTRMDQEEHQLLLITGPNMAGKSTYMRQVALITL 656
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+G FVP RA I + D IF R+GA D + G STFM EM ET L AT RSLI++
Sbjct: 657 MAQIGCFVPAQRAEIGIVDRIFTRIGAADDLVGGRSTFMVEMDETRLALAQATSRSLILL 716
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DE+GRGTSTYDG LA AI E++ + + A TLF+TH+HELT L + + V
Sbjct: 717 DEVGRGTSTYDGMALAHAIVEYIHDHVGAKTLFSTHYHELTHLEAD---------LPRVV 767
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N H A ++ L+++EPG D+S+GIHVA+ A P V+ AR LE
Sbjct: 768 NLH--ARCVEKEGEVVFLHRMEPGGADRSYGIHVAQLAGMPAEVIRRARSLLETLE 821
>gi|51892895|ref|YP_075586.1| DNA mismatch repair protein MutS [Symbiobacterium thermophilum IAM
14863]
gi|81692094|sp|Q67NK1.1|MUTS_SYMTH RecName: Full=DNA mismatch repair protein MutS
gi|51856584|dbj|BAD40742.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 875
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 210/578 (36%), Positives = 303/578 (52%), Gaps = 38/578 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y YM LD A R L + S D + +L +M+RT TA MG RLL WL++PLLD+
Sbjct: 266 YYPGDYMVLDPATRRNLELTRSLRDGGRRGTLLWVMDRTVTA-MGARLLKSWLERPLLDL 324
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+I+AR + V V LR DLR L+ + D+ERL + A + +V L QS + L
Sbjct: 325 RQIHARHEAVGELVHRPVLRADLRALLQEVHDLERLAGRVAVGSANARDLVALKQSLVAL 384
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P IR AL+ + L++ R D L+ L D L + E V L E G ++
Sbjct: 385 PSIRVALEDVRAE--RLVELR--DQLDMLDDVRDLIEHAIADEPPVALT--EGG--ILKD 436
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
+ + L+ + I + + + K+LK+ FG+ +TK P
Sbjct: 437 GFHPEVDELRRIARDGKAWIAQVEARERERTGI---KSLKIGYNKVFGYYLAVTKPNLPL 493
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ-TAVTFS 583
+ +I +T + +F +LK+L ++ E + + EL + Q A +
Sbjct: 494 V----PPDYIRKQTLANEERFITPELKELEEKVLHAAERVMDLEYELFVEIRQRVAAEVT 549
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE--GSRHPCVE-AQD 640
I +S A ++ELD L SFA++AS Y RP ++ G +LE GSRHP +E +
Sbjct: 550 RIQRS-ARAVAELDALASFAEVASLYG--YCRPLVD----GSTVLELKGSRHPVLERVME 602
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
F+PND + G++ +ITGPNMGGKST +RQ + +++AQ GSFVP + A I + D
Sbjct: 603 EGAFVPNDLLVDTGENRVLLITGPNMGGKSTVMRQAALAVILAQAGSFVPAESAHIGLVD 662
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F RVGA D G STFM EM E A+IL AT+RSL+++DE+GRGT+T+DG +AWAI
Sbjct: 663 RVFTRVGASDDLATGRSTFMVEMTEVANILHSATERSLVVLDEVGRGTATFDGLSIAWAI 722
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
EH+ + I TLFATH+HEL L + GV NY V+ + + L
Sbjct: 723 TEHIHQAIGCRTLFATHYHELCEL---------EGILPGVKNYSVA--VMEKGEDIIFLR 771
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
K+ G D+S+GI V A P SVV ARE A LE+
Sbjct: 772 KLVRGGADRSYGIQVGRLAGLPASVVERAREILATLEE 809
>gi|300855302|ref|YP_003780286.1| DNA mismatch repair protein MutS [Clostridium ljungdahlii DSM
13528]
gi|300435417|gb|ADK15184.1| predicted DNA mismatch repair protein MutS [Clostridium ljungdahlii
DSM 13528]
Length = 891
Score = 299 bits (766), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 316/580 (54%), Gaps = 41/580 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y++ Y+ +D + R L + ES + NK SL ++++T T+ MG R L WL+QPL++
Sbjct: 256 YNIVDYLTIDGNSRRNLEITESLRENNKKGSLLWVIDKTNTS-MGGRQLRRWLEQPLINK 314
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+I RLD V+ ++ + +DL++ LK I DIERL+ + + +++ L S ++
Sbjct: 315 VKIEERLDSVEEISNNISYHEDLKEALKNIYDIERLVGKISSKSVNAKELNFLKNSIEKI 374
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ----LENGEY 460
P ++S L + + L+K Y E+L D L L++ S+ LD L+ G
Sbjct: 375 PEVKSILSNFH---TKLLKYMY----ENL---DELKDIYVLLDKSI-LDNPAISLKEGN- 422
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+I Y++ + LK + + I SL S+ ++ K+LK+ FG+ +TK
Sbjct: 423 LIKKGYNSDIDELKEIKAHGKEWIASLEN---SEREVTKIKSLKIGYNKVFGYYIEVTKS 479
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ + ++I +T + ++ +LK++ D+ E+ N + + V
Sbjct: 480 NLNLVPE---GRYIRKQTLTNAERYITPELKEMEDKILGAEEKLINLEYSVFIEVRDKIE 536
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ- 639
+ + A ++SE+D L S A +A Y +P I D +II+E RHP VE
Sbjct: 537 IEVDRMQKSAKIISEVDCLSSLARVA--IENNYCKPKITNSD--NIIIEEGRHPVVEKMI 592
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
D FI ND + GK+ +ITGPNM GKST++RQ+ + ++MAQ+GSFVP ASISV
Sbjct: 593 DSGEFISNDINIDTGKNQLLLITGPNMAGKSTYMRQIALIVIMAQIGSFVPAKNASISVC 652
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D G STFM EM E ++ILK AT++SLI++DE+GRGTSTYDG +AW+
Sbjct: 653 DKIFTRIGASDDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRGTSTYDGLSIAWS 712
Query: 760 ICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
+ E++ + +++ TLFATH+HELT L ++ GV NY VS + +
Sbjct: 713 VIEYICKNSKLKCKTLFATHYHELTKLEG---------KIDGVKNYCVS--VKEMEDNIV 761
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
L K+ G DQS+GI VA+ A PE V+ A E LE
Sbjct: 762 FLRKIIRGGADQSYGIEVAKLAGLPEEVLKRAGEILNSLE 801
>gi|410667733|ref|YP_006920104.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105480|gb|AFV11605.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 881
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 224/718 (31%), Positives = 362/718 (50%), Gaps = 61/718 (8%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
+IG + D++ + +F + + + L L EC++ ++ E + D
Sbjct: 136 SIGCAWSDISTGKFQMTQFSETAAAEYLRDLLSRLQPAECIIRSDQAAFFE-PLMEDYWE 194
Query: 214 RCGVMLTERKKT-------EFKTRDLVQD----LDRLVRGSVEPVRDLVSGFEIAPGALG 262
G+ +T K E TR Q+ +DR FE +
Sbjct: 195 SKGLNITRLNKEINGQVAWELVTRQFGQENLIGIDR-------------DAFETGLVSAA 241
Query: 263 ALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNR 322
LLSY S + Y+ S M +D+ R + + + D + SLF ++R
Sbjct: 242 NLLSYIMETQKTSTLPFKDLSVYTPKSCMYIDAMTRRNMELFRTLRDGKREGSLFWALDR 301
Query: 323 TCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMH 382
T T GMG RLL WL+ PLLD+ EI AR + V+ LR +L++ LK+I D+ER++
Sbjct: 302 TLT-GMGTRLLRYWLESPLLDIEEIEARQEAVEELAGSFFLRNELQECLKKIYDLERIIS 360
Query: 383 NLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER--YLDPLESLTDDDHLN 440
++ + AG + ++ L +S +P ++ L Q + S +++E LDP+ + +
Sbjct: 361 RVDWQLAGPRDLLGLAKSLQVIPDLKEILGQAK---SKMLREAGVELDPVADIKE----M 413
Query: 441 KFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD 500
F AL++ L+NG +I + Y + L+N E I L + +
Sbjct: 414 LFSALIDDPPA--NLKNGG-IIRTGYHPEVDKLRNMIAEGEDWIRKLEARERVRTGI--- 467
Query: 501 KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKV 560
K+LK+D FG+ +TK P + + +I +T +F T+LK+ +
Sbjct: 468 KSLKIDYNKVFGYYIEVTK---PNLHL-VPGDYIRKQTLTQAERFITTELKEQEALFLGA 523
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
E ++ + ++ + + SE + A +++ +D L+SFA+ A+ YT+P IN
Sbjct: 524 TERLQDLEYQIFLDIRRQVGEASEKIRRNAGIIARIDCLVSFAETAAR--YHYTKPKIN- 580
Query: 621 PDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
+ G I ++ RHP +E +F+PND ++ I+TGPNM GKST++RQ+ +
Sbjct: 581 -NSGVIRIKNGRHPVLEQLLPEGSFVPNDLEIGEDADRILILTGPNMAGKSTYMRQMALI 639
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
+LMAQ GS VP D A I + D +F R GA D +G STFM EM E + I+ AT+RS I
Sbjct: 640 VLMAQCGSLVPADEAEIGIVDRVFVRAGAFDDLGKGQSTFMMEMNEVSYIVHHATERSFI 699
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
++DE+GRGT T+DG G+AWAI E++ ++I A T+FATH+H+LT LA + G
Sbjct: 700 VLDEIGRGTGTFDGIGIAWAIIEYIHDKIGARTIFATHYHQLTQLAD---------ILHG 750
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
VAN V+ + + + L+KV PG D+S+GI VA A+ PE +V A+E AA +E
Sbjct: 751 VANCSVA--VQEEGQNIVFLHKVVPGGTDKSYGIQVARLAHLPEELVQRAQEVAASME 806
>gi|294507623|ref|YP_003571681.1| DNA mismatch repair protein MutS [Salinibacter ruber M8]
gi|294343951|emb|CBH24729.1| DNA mismatch repair protein MutS [Salinibacter ruber M8]
Length = 903
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 298/586 (50%), Gaps = 47/586 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I++YS D ++ LD R L +++S D +L +++ T T MG R L WL +PL
Sbjct: 266 IKRYSKDEHIALDPETKRNLELVQSIQDDGHEGTLVSILDETETP-MGGRRLRAWLVRPL 324
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
DV I RLD V+A VDD LR DLR+ L ++ D+ERL + RA ++ + +
Sbjct: 325 RDVGRIRHRLDAVEACVDDRTLRGDLREELNQMGDLERLAGKVATGRAAPGDLIAIKHTL 384
Query: 402 IRLPYIRSALQQYEGQFSSLIKE------RYLDPLESLTDDDHLNKFIALVETSVDLDQL 455
RLP + L + I++ +D ++S DD K
Sbjct: 385 RRLPNVLGLLADADSDALGAIEDDLRPCPEMVDRIQSALVDDPPAKIS------------ 432
Query: 456 ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
E G +I Y L L+ + + + +L + + D+P +LK+ FG+
Sbjct: 433 EGG--LIRDGYSEELDELRTIAQEGKDWVANLETEESERTDIP---SLKVGFNKVFGYYI 487
Query: 516 RITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
+T K+ + +I +T D ++ +LK++ ++ E+ + ++EL N +
Sbjct: 488 EVTNTHADKVPE----DYIRKQTLVDSERYVTPELKEMEEKILTAEEKIETLEQELFNEL 543
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ I + A +L+ LD A++A YTRP ++ D I +E RHP
Sbjct: 544 RDQIAQQTGILQENAELLAHLDCFAGLAEVAEQHD--YTRPSVD--DGLTIDIEEGRHPV 599
Query: 636 VEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE FIPND L IITGPNM GKS +RQVG+ +L+AQVGSFVP +
Sbjct: 600 VEQTLPPGDPFIPNDMALDPDDEQVLIITGPNMAGKSVALRQVGLIVLLAQVGSFVPAEA 659
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A I V D IF RVGA D G STF+ EM E A+IL AT RSLI+ DE+GRGTST+DG
Sbjct: 660 AQIGVVDRIFTRVGASDNLAAGESTFLVEMNEAANILNNATARSLILFDEVGRGTSTFDG 719
Query: 754 FGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
+AWAI E+L E E+ A TLFATH+HEL A+A ++ V NY + +
Sbjct: 720 LSIAWAIVEYLHERPEVAARTLFATHYHELNAMA---------DRLERVHNYRI--QVSE 768
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ L K+ PG D S+GI VA+ A P++V+ ARE LE
Sbjct: 769 HEGEIVFLRKLIPGGADHSYGIEVAKMAGLPDAVIARAREVLQNLE 814
>gi|292656069|ref|YP_003535966.1| DNA mismatch repair protein MutS [Haloferax volcanii DS2]
gi|448290061|ref|ZP_21481217.1| DNA mismatch repair protein MutS [Haloferax volcanii DS2]
gi|291371610|gb|ADE03837.1| DNA mismatch repair protein mutS [Haloferax volcanii DS2]
gi|445580453|gb|ELY34832.1| DNA mismatch repair protein MutS [Haloferax volcanii DS2]
Length = 921
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 237/709 (33%), Positives = 355/709 (50%), Gaps = 71/709 (10%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
T GL VD++ E L T + AL AL E L P E V +C L D
Sbjct: 167 TYGLAVVDVST-----GECL----VTGADRAL-ALEELERLAPAELVVGPDCD-LPD--- 212
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
+ + +T F+ D R + P D V A+GA L+YAE
Sbjct: 213 ----LPFDPMETPFEPEAFDADAARETLSAYAPRPDAVVESAAELRAVGAALAYAEYAQG 268
Query: 274 ESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKR 331
+S Y R D +++LD+ A+R+L + ES++ A +LF +++ T A +G+R
Sbjct: 269 DSQLA-YVTRVTRFDPREFLQLDATAIRSLELFESRS-ARAGSTLFSVLDETACA-LGRR 325
Query: 332 LLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGL 391
L WL++PL+D + I ARLD V+A DD R DLR HL + D+ERL+ + + RA
Sbjct: 326 RLEAWLRRPLVDRDRIEARLDAVEALFDDALARADLRDHLSSVYDLERLVARVSRERADA 385
Query: 392 QQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD 451
+ + L + R+P IR AL + S +++ LD LE + D LV +V
Sbjct: 386 RDLRSLKTTLDRVPEIRDALVGTDSDLLSDLRDS-LDELEDVRD---------LVGDAVV 435
Query: 452 LDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKALKL 505
D E G +I+ +D L ++ E+ + +L +Q + +D +L++
Sbjct: 436 SDPPQEITEGG--VIADGFDAELDDVRGTAEAGREWVSNLEAREQERTGID-----SLEV 488
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
G+ +T P + ++ + +T K+ +F +LK+ D+ + +
Sbjct: 489 GYNQVHGYYIEVTN---PNL-DRVPDDYQRRQTLKNSERFYTPELKEREDEILRASDRAD 544
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L V T S +++A L++LDVL + AD+A + Y RP+ + D +
Sbjct: 545 ALEYDLFCEVRADVATESARVQAVADALADLDVLRTLADVAVT--NDYARPEFHAGDTDE 602
Query: 626 ---IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
I ++ RHP VE AQD F+PN L RG ++TGPNM GKST++RQV + L
Sbjct: 603 SAGIRIDAGRHPVVERAQD--EFVPNPADLPRGS--VALVTGPNMSGKSTYMRQVALVTL 658
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
+AQVGSFVP A + V D +F R+GA D G STFM+EM E IL AT SL+++
Sbjct: 659 LAQVGSFVPAKSARLPVLDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATGDSLVLL 718
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DE+GRGTST DG +A A E L +E+ A TLFATH+H+LT A + A GV
Sbjct: 719 DEVGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDRA---------GVF 769
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
N H +A ++T L+ V G S+G+ VA+ A P SVV AR
Sbjct: 770 NLHFTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPASVVERAR 816
>gi|150390307|ref|YP_001320356.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
gi|172052479|sp|A6TR79.1|MUTS_ALKMQ RecName: Full=DNA mismatch repair protein MutS
gi|149950169|gb|ABR48697.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
Length = 880
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 209/612 (34%), Positives = 329/612 (53%), Gaps = 58/612 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GAL Y + + +I YS+ M LD + L + E+ +K SL G+
Sbjct: 240 AAGALFHYLKTTQKRALEHINHINVYSIHEKMTLDINTRKNLELTETIRSKSKKGSLLGV 299
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L W++ PL+D IN RL+ VQ + LRQ+L++ LK+I D+ER
Sbjct: 300 LDKTSTA-MGGRMLRKWIEAPLIDPVIINKRLEAVQLLKEQIELRQELKESLKKIYDLER 358
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ-FSSLIKERYLDPLESLTDDDH 438
L + + ++ L S LP I + L++ +G+ F SL++ +DPL D+ H
Sbjct: 359 LAGKISYGSVTPRDLIALKNSLSYLPSIINGLEKIQGETFQSLVQS--IDPL----DEVH 412
Query: 439 LNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
+LVE S+ L + G +I Y + LKN + I L ++ +
Sbjct: 413 -----SLVELSILEDAPLSSKDGG--IIQEGYHKEVDELKNASTEGRQWIAQLEQKERVN 465
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-- 552
+ K+LK+ FG+ ITK + T++I +T + ++ +LK+
Sbjct: 466 SGI---KSLKIKYNKIFGYYIEITKSNLSMV----PTEYIRKQTLANCERYVTPELKEIE 518
Query: 553 ---LGDQYQKVLEEYK---NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LG + + +L EY ++++ + + + T A ++ELDVL SFA++A
Sbjct: 519 SKILGAEEKVILLEYHLFIEVREKIAHEITRIQQT--------ARAIAELDVLYSFAEIA 570
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPN 665
+ + +P IN + I+ EG RHP VE + +F+PND + IITGPN
Sbjct: 571 AE--NNFIKPHINTSNEIKIV-EG-RHPVVELTFNKESFVPNDTYMDNRDCSMSIITGPN 626
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST++RQV + +LMAQ+GSFVP ASI + D IF R+GA D +G STFM EM E
Sbjct: 627 MAGKSTYMRQVALIVLMAQIGSFVPASEASIGIVDRIFTRIGASDDLAQGHSTFMVEMSE 686
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
A+IL AT SL+I+DE+GRGTST+DG +AWA+ E++ + ++ TLF+TH+HELT L
Sbjct: 687 MANILNNATANSLVILDEIGRGTSTFDGLSIAWAVIEYMQQYKKSKTLFSTHYHELTELE 746
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
++ GV NY++ ++ ++ L KV G+ +S+GI VA+ A P +
Sbjct: 747 ---------GKIQGVKNYNIL--VEEDGEEIVFLRKVVSGSTSKSYGIQVAKLAGLPLNT 795
Query: 846 VTLAREKAAELE 857
+ A+E ++LE
Sbjct: 796 LIRAQEILSDLE 807
>gi|376261287|ref|YP_005148007.1| DNA mismatch repair protein MutS [Clostridium sp. BNL1100]
gi|373945281|gb|AEY66202.1| DNA mismatch repair protein MutS [Clostridium sp. BNL1100]
Length = 873
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 211/616 (34%), Positives = 329/616 (53%), Gaps = 44/616 (7%)
Query: 251 VSGFEIAPGALGALLSYAEL-----LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE 305
+ ++IA A GALL Y E LS N+ +Y +L+ YM LD+++ R L + E
Sbjct: 227 IQEYDIAVNASGALLKYLESTQKVNLSHIQNFNSY-----ALEEYMILDASSRRNLELTE 281
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ + +K SL ++++T T+ MG RLL W++QPL++ +I+ RL+ V+ + R
Sbjct: 282 TMREKSKKGSLLWVLDKTMTS-MGGRLLRKWIEQPLINHGDISLRLNAVEELKNKFMARV 340
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
+ R+ LKR+ DIERLM + + ++ L S ++PYI++ L +E ++ IK
Sbjct: 341 EARELLKRVYDIERLMGKVILGSVNCRDLIALKNSMCQIPYIKNLLDGFETEY---IKNC 397
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
Y L+SL D +L + + V + E G +I Y++ + L+ + I
Sbjct: 398 Y-HQLDSLEDVCNLIDISIIDDPPVTIK--EGG--IIKDGYNSEVDKLRMASIQGKDWIA 452
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+L AS+ + K LK+ FG+ +TK + + ++I +T + ++
Sbjct: 453 ALE---ASEREKTGIKNLKVGFNRVFGYYIEVTKSYFSLVPE----EYIRKQTLANCERY 505
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
+LK++ D E+ + L ++ KS A L+E+DVL S A++
Sbjct: 506 ITPELKEIEDNILGAEEKIVQLEYSLFVQIKDKIAEQLSRIKSTARALAEIDVLASLAEV 565
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGP 664
A Y +PD++ D +I+ RHP VE D F+PND L + IITGP
Sbjct: 566 ADR--EGYCKPDVSVSDKIEIV--DGRHPVVEKMTDKSGFVPNDTVLDMEEDRLAIITGP 621
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQ + +LMAQ+GSFVP A I + D IF RVGA D G STFM EM
Sbjct: 622 NMAGKSTYMRQTALIVLMAQIGSFVPAASAKIGLVDRIFTRVGASDDLASGQSTFMVEMS 681
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELT 782
E A+IL AT RSL+++DE+GRGTST+DG +AWA+ E++V E++ TLFATH+HELT
Sbjct: 682 EVANILINATKRSLLVLDEIGRGTSTFDGLSIAWAVIEYIVSKEQLGCRTLFATHYHELT 741
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ G+ NY ++ + + L K+ G D S+GI VA+ A P
Sbjct: 742 ELEG---------KLPGIKNYCIT--VKEKGDDVIFLRKIIRGGADGSYGIQVAKLAGVP 790
Query: 843 ESVVTLAREKAAELED 858
+V+ A+E A L+D
Sbjct: 791 HAVIDRAKEILANLDD 806
>gi|407772640|ref|ZP_11119942.1| DNA mismatch repair protein MutS [Thalassospira profundimaris
WP0211]
gi|407284593|gb|EKF10109.1| DNA mismatch repair protein MutS [Thalassospira profundimaris
WP0211]
Length = 907
Score = 298 bits (764), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 247/793 (31%), Positives = 383/793 (48%), Gaps = 75/793 (9%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
IGL ++D++ F+ + +AL L E L + + SE + D
Sbjct: 160 IGLAWLDMSTGDF----FVQPCEMAGLGAALARLDPGEILFSEKMLNRSE---VFDIYAE 212
Query: 215 CGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAP-GALGALLSYAELLSD 273
++T + F + L +L VE + D GFEIA A GAL+ Y EL
Sbjct: 213 YKNIITPQPTARFDAENAQLRLKKLY--EVEAL-DAFGGFEIAELSAAGALIDYVELTQK 269
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
+ + + M +D+A R+L ++++++ K SL +++RT T G G RLL
Sbjct: 270 GQMPRLAPPTRVAEGAAMEIDAATRRSLELIQTQSGERKG-SLLSVIDRTRT-GAGARLL 327
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
L PL + +E+N RLD+V+ F D LR DLR L DIER + L R G +
Sbjct: 328 AARLSAPLTNADEVNKRLDLVEYFHDRDGLRSDLRAALGECPDIERALSRLSVGRGGPRD 387
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD----DHLNKFIALVETS 449
+ + I + L + +G L + E+L+D H I L+ +
Sbjct: 388 LAAMRDGLSCAFAIGNLLNKPDGGNDGLTAQP-----EALSDHLTMMGHHGDLIDLLRRA 442
Query: 450 V--DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDK 507
+ L L I+ Y L L+ ++ I +L + + LK+
Sbjct: 443 IAESLPLLARDGGFIAGGYHPPLDELRMLSSESKKLIANLQARYTEQTGI---SNLKVKH 499
Query: 508 GTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNC 567
G+ ++ K K+ + +FI +T + V+FT +L +L + K ++
Sbjct: 500 NNVLGYFIEVSAKTADKMME--MDEFIHRQTMANAVRFTTVELSELESKVSKAGDQALAL 557
Query: 568 QKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA--SSCPTPYTRPDINPPDVGD 625
+ EL + ++ + ++ A+ L+ LDV + A+LA C RP+I+ D
Sbjct: 558 ELELFDELVSAVLAKADDIAKCASALAGLDVSAALAELARDQGC----IRPNIDNSLAFD 613
Query: 626 IILEGSRHPCVEAQDWVN----FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
I RHP VEA N F+ NDC+L +S + +ITGPNM GKSTF+RQ + +
Sbjct: 614 IT--AGRHPVVEAALRENGDAPFVANDCRLEDEQSLW-LITGPNMAGKSTFLRQNALIAV 670
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
+AQ+G+FVP +A I V D +F+RVGA D RG STFM EM+ETASIL ATDRSL+I+
Sbjct: 671 LAQIGAFVPAAKAHIGVIDRLFSRVGAADDLARGRSTFMVEMVETASILNQATDRSLVIL 730
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DE+GRGT+T+DG +AWA+ E+L E + LFATH+HELTALA +
Sbjct: 731 DEIGRGTATFDGLSIAWAVVENLHEINQCRGLFATHYHELTALAAK-------------- 776
Query: 802 NYHVSAH---IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
H+S H I ++ L++V G+ D+S+GIHVA+ A P+ V+ A + LE
Sbjct: 777 LKHLSCHTMLIKEWQGEVVFLHEVGAGSADRSYGIHVAQLAGLPKPVIKRAEQVLKTLEK 836
Query: 859 FTPSAVIS---DD-----AKIEVGSKRKRISDP--NDMSRGAARAHQFLKEFSDMPLETM 908
+S DD IE +K +R S P +D + L +D+ + M
Sbjct: 837 GEQGGAVSKLADDLPLFAVAIEQAAKEERTSAPALSDAQKA------LLDAVADLDPDNM 890
Query: 909 DLKEALERVKRMK 921
+EAL+ + R++
Sbjct: 891 TPREALDALYRLQ 903
>gi|366162302|ref|ZP_09462057.1| DNA mismatch repair protein MutS [Acetivibrio cellulolyticus CD2]
Length = 872
Score = 298 bits (764), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 232/641 (36%), Positives = 328/641 (51%), Gaps = 65/641 (10%)
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
F+I A GALL Y E + KY ++ YM LD A R L + E+ + N+
Sbjct: 230 FDIYINASGALLEYIEQTQKVNLDHIQSFNKYRIEEYMVLDVATRRNLELTETMREKNRK 289
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL +++RT T+ MG R L W++QPL+++ +I R V F D +R ++R+ LKR
Sbjct: 290 GSLLWVLDRTMTS-MGGRTLRKWIEQPLINIYDIRDRHLAVNEFKDKFMVRMEVRELLKR 348
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE--RYLDPLE 431
+ D+ERLM + A + +V L S ++PYI+ L+ SL KE R +D L
Sbjct: 349 VYDMERLMGKIVLGSANCRDLVSLKNSIGQIPYIKELLKDLN---ESLNKESNRNIDALA 405
Query: 432 SLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
+ + ++K I E V + E G +I Y+ + LK + + L
Sbjct: 406 DIFE--IIDKAIC-DEPPVSVK--EGG--IIKEGYNEEVDKLKRASVDGKTWLVELENSE 458
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKE----EPKIRKKLT----TQFIVLETR--KD 541
+ K LK+ FG+ +TK P +K T +FI E + +D
Sbjct: 459 REKTGI---KNLKVGFNKVFGYYLEVTKSYFSLVPPNYIRKQTLANCERFITEELKVIED 515
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
V KL +L +YQ + E +N + R+ +TA K+LA ++DV+ S
Sbjct: 516 TVLGAEDKLVEL--EYQ-IFVEVRNKVAGEITRIKRTA-------KALA----QVDVICS 561
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQI 660
A++A YT P+IN DV I + RHP VE D F+PND L + I
Sbjct: 562 LAEVADR--ESYTMPEINNEDV--IHITDGRHPVVEKMIDQGEFVPNDTYLNMSEDQIAI 617
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQV + +LMAQ+GSFVP A I + D IF RVGA D G STFM
Sbjct: 618 ITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAVIGIADRIFTRVGASDDLAAGQSTFM 677
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHF 778
EM E A+IL AT RS++I+DE+GRGTSTYDG +AW++ EH+ + R A TLFATH+
Sbjct: 678 VEMSEVANILSNATSRSILILDEIGRGTSTYDGLSIAWSVIEHISDRKRIGARTLFATHY 737
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HELT L + GV NY +S ++ + L K+ G D S+GI VA
Sbjct: 738 HELTELEG---------SIDGVKNYCIS--VEEKGEDIIFLRKIIRGGADNSYGIQVARL 786
Query: 839 ANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR 879
A P V+ A+E ELED +D K+EV KR +
Sbjct: 787 AGVPVPVINRAKEILKELED-------ADINKMEVRLKRAK 820
>gi|149174706|ref|ZP_01853331.1| DNA mismatch repair protein [Planctomyces maris DSM 8797]
gi|148846400|gb|EDL60738.1| DNA mismatch repair protein [Planctomyces maris DSM 8797]
Length = 866
Score = 298 bits (764), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 221/738 (29%), Positives = 360/738 (48%), Gaps = 53/738 (7%)
Query: 196 PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL-DRLVRGSVEPVRDLVSGF 254
P E + + L++A+ MLTER F + + L D ++E GF
Sbjct: 172 PAECIFAEGNTALQNAVGHLDTMLTERPPWSFAEGESEKRLLDHFGTKTLE-------GF 224
Query: 255 EIAPG-----ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+ G A GALL Y + + I Y + +D A R+L + + +
Sbjct: 225 NLEAGTPSITAAGALLEYVQDTQKSAIPHINQIEPYERGDRLLIDEATRRSLELTRTIRE 284
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
+ SL +++ T T+ MG RLL W+ PL +++I RLD V+ + L ++R+
Sbjct: 285 GKREGSLISVLDETVTS-MGARLLTDWIANPLTSLSQIERRLDAVEELSQNPVLCTEVRE 343
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
L + D++RL + RA + + L Q+ LP +++ L + + L
Sbjct: 344 QLAKTYDLQRLTARIATGRASARDLSFLAQTLALLPKLKAKLSGRKAEL--------LQS 395
Query: 430 LESLTDDDHLNKFIALVETSV--DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
LE+ D D + + +ET + D N +I + L L++ + + I
Sbjct: 396 LEA--DIDLCAEVRSDIETMIIEDPPLTLNEGGVIRPGFSEELDELRSLSKGGKEWIAGY 453
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
+ + + +P LK+ FG+ ++ K+ +I +T K+ ++
Sbjct: 454 RNEESERIGIP---NLKVGYNKVFGYYLEVSAAHAAKV----PDHYIRKQTLKNQERYIT 506
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+LK+ ++ K + ++ + + + + + + A +L+++DVL A LA+
Sbjct: 507 PELKEYEEKVLKAEDRAVELEQSMFDELRERVAKEAPRTQKTAEILAQIDVLFGLAHLAT 566
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGKSWFQIITGPNM 666
YTRP++ V DI SRHP ++ Q F+PND L QIITGPNM
Sbjct: 567 HAG--YTRPEMTEEPVLDI--RESRHPVLDRLQPSGEFVPNDVLLGEPYGRVQIITGPNM 622
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST+IRQ + LMAQ+GSF+P A I + D IFARVGA D +G STFM EM E
Sbjct: 623 AGKSTYIRQAALLTLMAQIGSFIPASEARIGIADRIFARVGASDELSKGQSTFMVEMTEA 682
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
A IL A++RSL+I+DE+GRGTSTYDG LAW++ E L ++I+A TLFATH+HELT L
Sbjct: 683 ARILNSASERSLVILDEIGRGTSTYDGISLAWSMTEFLHDKIKARTLFATHYHELTEL-- 740
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
T+ + +N++V+ H ++ L+K+ G+ ++S+GIHVA A P+ V+
Sbjct: 741 -------TQTLKQASNWNVAVH--EQDGEIVFLHKIVEGSANKSYGIHVARLAGIPDQVI 791
Query: 847 TLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLE 906
A + + LE I + + + + R S +S AH L E D+ ++
Sbjct: 792 QRANQILSTLE----KDHIDETGQTTIPPRIDRKSSHQQLSLFGNTAHPVLDEIRDLNVD 847
Query: 907 TMDLKEALERVKRMKDDL 924
M ALE + R+++ L
Sbjct: 848 EMTPLAALEELYRIREQL 865
>gi|326202164|ref|ZP_08192034.1| DNA mismatch repair protein MutS [Clostridium papyrosolvens DSM
2782]
gi|325987959|gb|EGD48785.1| DNA mismatch repair protein MutS [Clostridium papyrosolvens DSM
2782]
Length = 873
Score = 298 bits (764), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 337/621 (54%), Gaps = 54/621 (8%)
Query: 251 VSGFEIAPGALGALLSYAELLS--DESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKT 308
+ ++IA A GALL+Y E + S+ N+ + Y+L+ YM LD+++ R L + E+
Sbjct: 227 IQEYDIAVNASGALLTYLESTQKVNLSHIQNFNL--YALEEYMILDASSRRNLELTETMR 284
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
+ +K SL ++++T T+ MG RLL W++QPL++ +I+ RL+ V+ + R + R
Sbjct: 285 EKSKKGSLLWVLDKTMTS-MGGRLLRKWIEQPLINHGDISLRLNAVEELKNKFMARVEAR 343
Query: 369 QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLD 428
+ LKR+ DIERLM + + ++ L S ++PYI+ L +E ++ S E+ LD
Sbjct: 344 ELLKRVYDIERLMGKVILGSVNCRDLIALKNSISQIPYIKEILNGFETEYISSCYEQ-LD 402
Query: 429 PLESLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIH 485
LE + + L++ S+ D ++ G +I Y+ + L++ + I
Sbjct: 403 SLEDVCN---------LIDISIIDDPPVTIKEGG-IIKDGYNPEVDKLRSASIQGKDWIA 452
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+L AS+ + K LK+ FG+ +TK + + ++I +T + ++
Sbjct: 453 ALE---ASEREKTGIKNLKVGFNRVFGYYIEVTKSYFSLVPE----EYIRKQTLANCERY 505
Query: 546 TNTKLKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLL 600
+LK+ LG + + VL EY V + A S I KS A L+E+DVL
Sbjct: 506 ITPELKEIEDNILGAEEKIVLLEYS----LFVQIKDKIAEQLSRI-KSTARALAEIDVLA 560
Query: 601 SFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQ 659
S A++A Y +P+I+ D +I+ RHP VE D F+PND L +
Sbjct: 561 SLAEVADR--EGYCKPEISVSDKIEIV--DGRHPVVEKMTDKSGFVPNDTVLDMEEDRLA 616
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
IITGPNM GKST++RQ + +LMAQ+GSFVP A I + D IF RVGA D G STF
Sbjct: 617 IITGPNMAGKSTYMRQSALIVLMAQIGSFVPASSAKIGLVDRIFTRVGASDDLASGQSTF 676
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATH 777
M EM E A+IL AT RSL+++DE+GRGTST+DG +AWA+ E++V E++ TLFATH
Sbjct: 677 MVEMSEVANILTNATKRSLLVLDEIGRGTSTFDGLSIAWAVIEYIVSKEQLGCRTLFATH 736
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
+HELT L ++ G+ NY ++ + + L K+ G D S+GI VA+
Sbjct: 737 YHELTELEG---------KLSGIKNYCIT--VKEKGDDVIFLRKIIRGGADGSYGIQVAK 785
Query: 838 FANFPESVVTLAREKAAELED 858
A P+ V+ A+E A L+D
Sbjct: 786 LAGVPQGVIDRAKEILANLDD 806
>gi|448570136|ref|ZP_21639130.1| DNA mismatch repair protein MutS [Haloferax lucentense DSM 14919]
gi|445723437|gb|ELZ75079.1| DNA mismatch repair protein MutS [Haloferax lucentense DSM 14919]
Length = 921
Score = 298 bits (764), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 242/727 (33%), Positives = 359/727 (49%), Gaps = 71/727 (9%)
Query: 152 GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDA 211
G T GL VD++ E L T + AL AL E L P E V +C L D
Sbjct: 166 GDTYGLAVVDVST-----GECL----VTGADRAL-ALEELERLAPAELVVGPDCD-LPD- 213
Query: 212 LTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELL 271
+ + +T F+ D R + P D V + A+GA L+YAE
Sbjct: 214 ------LPFDPMETPFEPEAFDADAARETLSAYAPRPDAVVESDAELRAVGAALTYAEYA 267
Query: 272 SDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+S Y R D +++LD+ A+R+L + ES++ A +LF +++ T A +G
Sbjct: 268 QGDSQLA-YVTRITRFDPREFLQLDATAIRSLELFESRS-ARAGSTLFSVLDETACA-LG 324
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
+R L WL++PL+D I ARLD V A DD R DLR HL + D+ERL+ + + RA
Sbjct: 325 RRRLEAWLRRPLVDRERIEARLDAVAALCDDALARADLRDHLSSVYDLERLVARVSRERA 384
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
+ + L + R+P IR AL + S +++ LD LE + D LV +
Sbjct: 385 DARDLRSLKTTLDRVPEIREALAGTDSDLLSDLRDS-LDELEDVRD---------LVGDA 434
Query: 450 VDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKAL 503
V D E G +I+ +D L ++ E+ + +L +Q + +D +L
Sbjct: 435 VVSDPPQEITEGG--VIADGFDAELDDVRGTAEAGREWVSNLEAREQERTGID-----SL 487
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
++ G+ +T P + ++ + +T K+ +F +LK+ D+ + +
Sbjct: 488 EVGYNQVHGYYIEVTN---PNL-DRVPDDYQRRQTLKNSERFYTPELKEREDEILRASDR 543
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
+ +L V T S +++A L++LDVL + AD+A + Y RP+ + D
Sbjct: 544 ADALEYDLFCEVRADVATESARVQAVADALADLDVLRTLADVAVA--NDYARPEFHAGDT 601
Query: 624 GD---IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
+ I ++ RHP VE AQD F+PN L RG ++TGPNM GKST++RQV +
Sbjct: 602 DESAGIRIDAGRHPVVERAQD--EFVPNPADLPRGS--VALVTGPNMSGKSTYMRQVALV 657
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
L+AQVGSFVP A + V D +F R+GA D G STFM+EM E IL AT SL+
Sbjct: 658 TLLAQVGSFVPAKSARLPVLDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATGDSLV 717
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
++DE+GRGTST DG +A A E L +E+ A TLFATH+H+LT A + G
Sbjct: 718 LLDEVGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDRE---------G 768
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
V N H +A ++T L+ V G S+G+ VA+ A P SVV AR E E
Sbjct: 769 VFNLHFTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPASVVERARNLVDEPETD 826
Query: 860 TPSAVIS 866
SA S
Sbjct: 827 AESAADS 833
>gi|407768113|ref|ZP_11115492.1| DNA mismatch repair protein MutS [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407288826|gb|EKF14303.1| DNA mismatch repair protein MutS [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 907
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 241/787 (30%), Positives = 380/787 (48%), Gaps = 63/787 (8%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTR 214
+GL ++D++ ++ + +AL L E L+ + + SE + D
Sbjct: 160 VGLAWLDMSTGDF----YVQPCDMGGLPAALARLDAGELLISDKLLNRSE---MFDIYAE 212
Query: 215 CGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAP-GALGALLSYAELLSD 273
++T + + F + L +L + D GFEIA A GAL+ Y +L
Sbjct: 213 YKNVITPQPASRFDAENAQLRLKKLYEVAA---LDAFGGFEIAELSAAGALIDYVDLTQK 269
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
++ + + M +D+A R+L + ++++ K SL +++RT T G G RLL
Sbjct: 270 GQMPRLAPPQRMAAGAAMEIDAATRRSLELTQTQSGERKG-SLLSVIDRTRT-GAGARLL 327
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
L PL D IN RLD+V F D ALR DLR L DIER + L R G +
Sbjct: 328 AARLSAPLTDAGTINKRLDLVYYFHDRDALRSDLRAALGECPDIERALSRLSVGRGGPRD 387
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV--D 451
+ + I + L + +G L + ++ LTD H + L+ S+ +
Sbjct: 388 LAAMRDGLACAFAIGNLLHKPDGGNDGLTAQPAA-LIDHLTDMGHHGDLVDLLRRSLSEN 446
Query: 452 LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF 511
L L I+ Y L L+ ++ I +L + + +LK+
Sbjct: 447 LPLLARDGGFIAGGYHPPLDELRMLSSESKKLIANLQARYTEQTAI---TSLKVKHNNVL 503
Query: 512 GHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKEL 571
G+ + K+ ++ + +FI +T + V+FT +L +L + K ++ + EL
Sbjct: 504 GYFIEVPAKQADRMME--IDEFIHRQTMANAVRFTTVELSELESKVSKAGDQALALELEL 561
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASS--CPTPYTRPDINPPDVGDIILE 629
+ ++ + ++ A L+ LDV + A+LA C RP I+ DI
Sbjct: 562 FDSLVTGVLEHADAIARCAQALAGLDVSAALAELARDQVC----IRPTIDDSLAFDI--R 615
Query: 630 GSRHPCVEAQDWVN----FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
G RHP VEA N F+ NDC+L G+ +ITGPNM GKSTF+RQ + ++AQ+
Sbjct: 616 GGRHPVVEAALRENGDSPFVANDCRL-EGEQSLWLITGPNMAGKSTFLRQNALIAVLAQI 674
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
G+FVP + A I V D +F+RVGA D RG STFM EM+ETA+IL A+DRSL+I+DE+G
Sbjct: 675 GAFVPAETAHIGVIDRLFSRVGAADDLARGRSTFMVEMVETAAILNQASDRSLVILDEIG 734
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGT+T+DG +AWA+ E+L E + LFATH+HELTALA + A H+
Sbjct: 735 RGTATFDGLSIAWAVVENLHEVNKCRGLFATHYHELTALAAKLA--------------HL 780
Query: 806 SAH---IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
S H I ++ L++V G+ D+S+GIHVA+ A P+ V+ A + LE S
Sbjct: 781 SCHTMLIKEWQGEVVFLHEVGAGSADRSYGIHVAQLAGLPKPVIKRAEQVLKTLEKGEQS 840
Query: 863 AVIS---DD-----AKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEAL 914
+S DD A IE + ++ P A L +++ + M +EAL
Sbjct: 841 GAVSKLADDLPLFAAAIEQVKQEEKAKTPALSPEQKA----LLDAVAEIDPDNMTPREAL 896
Query: 915 ERVKRMK 921
+ + R++
Sbjct: 897 DALYRLR 903
>gi|228474938|ref|ZP_04059666.1| DNA mismatch repair protein MutS [Staphylococcus hominis SK119]
gi|314936543|ref|ZP_07843890.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
gi|228270923|gb|EEK12311.1| DNA mismatch repair protein MutS [Staphylococcus hominis SK119]
gi|313655162|gb|EFS18907.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
Length = 873
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 230/683 (33%), Positives = 344/683 (50%), Gaps = 85/683 (12%)
Query: 211 ALTRCGVMLTERKKTEFKTR-------------------DLVQDLDRLVRGSVEP--VRD 249
AL+ C V E K T F+ D+ +DL + + + E VR+
Sbjct: 138 ALSYCDVSTGELKATNFEDESTLINEIITINPNEIVVREDINEDLKKQISLTTETITVRE 197
Query: 250 LVSGFEIAPGALGALLSY--AELLSDESNYGNYY-------IRKYSLDSYMRLDSAAMRA 300
+S E + L L + +LL D ++ + Y+ +M++D A R
Sbjct: 198 EISDIEYSVNTLENNLMFLTTQLLLDYIHHTQKRDLSHIEDVITYAAIDFMKMDYYAKRN 257
Query: 301 LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
L + ES +K +L LM+ T T MG R L W+ +PL+ + I RLDIV++F+D
Sbjct: 258 LELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIHKDNIEQRLDIVESFIDH 316
Query: 361 TALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG---- 416
R LR +L ++ DIERL+ + + +++L S +P I+S L+Q +
Sbjct: 317 FIERDTLRGYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIKSLLEQMDNVTTT 376
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVE----TSVDLDQLENGEYMISSSYDTGLSA 472
QFS+L E D L+ L D +LVE + D + G S D L A
Sbjct: 377 QFSTL--EPLEDLLKVLED--------SLVEEPPISVKDGGLFKQG---FSKQLDEYLEA 423
Query: 473 LKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE----EPKIRKK 528
KN ++ L + ++T K+LK+ FG+ IT+ EP
Sbjct: 424 SKNGKDWLAQLQAKERERTGI-------KSLKISYNKVFGYFIEITRANLQGFEPSEHDY 476
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
Q T + +F +LK+ D ++ + +L R+ + +++E +
Sbjct: 477 HRKQ-----TLSNAERFITDELKEKEDIILGAEDKAIELEYQLFIRLREHVKSYTERLQR 531
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPN 647
A ++SELD L SFA++A Y RP+ + D + LE SRHP VE D+ +++PN
Sbjct: 532 QAKVISELDCLQSFAEIAQKYN--YVRPEFS--DDKTLNLENSRHPVVERVMDYNDYVPN 587
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
DC L + ++ +ITGPNM GKST++RQV + +MAQ+G++VPCD A + + D IF R+G
Sbjct: 588 DCYLDQN-NFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDNAILPIFDQIFTRIG 646
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
A D + G STFM EMLE L AT SLII DE+GRGTSTYDG LA A+ E++ E
Sbjct: 647 AADDLVSGKSTFMVEMLEAQKALTYATADSLIIFDEIGRGTSTYDGLSLAQAMIEYVAET 706
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGAC 827
A TLF+TH+HELT L +Q+ + N HV+A D +L L+KV+ GA
Sbjct: 707 SHAKTLFSTHYHELTTL---------DQQLSSLKNVHVAA--DEYQGELIFLHKVKEGAV 755
Query: 828 DQSFGIHVAEFANFPESVVTLAR 850
D S+GI VA+ AN PE V+ A+
Sbjct: 756 DDSYGIQVAKLANLPEKVIERAQ 778
>gi|407795672|ref|ZP_11142630.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
gi|407020013|gb|EKE32727.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
Length = 845
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 346/715 (48%), Gaps = 75/715 (10%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
+ GL Y DLT + DSH ++ L KE ++ E ++ + K R+ L
Sbjct: 136 SFGLSYADLTTGETSASYIGRDSH--SLIGELYHQPVKEIVMSREIPENVQ-KEAREKLD 192
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
C V E + LV++L E+ P G L +Y
Sbjct: 193 -CTVSFEEETHIPEDSHHLVRNLSE----------------ELTP-VFGRLYNYINRTQK 234
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
+ ++ YMRLD + R L + E+ K SL +++ T TA MG RLL
Sbjct: 235 RAMSHLQPVQYIETKDYMRLDMYSKRNLELTETLMKKGKKGSLLSVIDSTVTA-MGARLL 293
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
W+ +PLLD + I R +IVQ F+D+ R R+ L + D+ERL + +
Sbjct: 294 KKWIDRPLLDESLIQKRQEIVQGFMDNFLYRDAFREDLTSVYDLERLAGRVAFGNINAKD 353
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
+++L +S ++P I S+L E +R +DP+E L L+E SV D
Sbjct: 354 MLQLKRSLQKVPSILSSLSTLEVSVIQTFVQR-MDPMEELAQ---------LLENSVHED 403
Query: 454 ---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQ 510
+ G +I S Y L ++ Q + ++ I L K+ + +L ++LK+
Sbjct: 404 AKLTIREGN-IIKSGYSESLDEYRDAQINGKKWIADLEKR---EKELTGIRSLKIKYNKV 459
Query: 511 FGHVFRITKKEEPKIRKKL--------TTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
FG+ +T+ + ++ +FI E ++ + K + +Y+ LE
Sbjct: 460 FGYFIEVTRANLTHVPERYERKQTLANAERFITPELKEKETTILQAEEKSIELEYELFLE 519
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
+ K+ VN++ Q LA +SELDVL F+ A Y RP +
Sbjct: 520 -IRELVKDYVNKIQQ-----------LAKDISELDVLQGFSYAAEM--NGYERPSFSSKR 565
Query: 623 VGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
++ SRHP VE F+PND + + F +ITGPNM GKST++RQ+ + +M
Sbjct: 566 TVHLV--NSRHPVVEKVMEDEFVPNDIYMDESTNIF-LITGPNMSGKSTYMRQMALTSVM 622
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQ+GSFVPC+ A + V D IF R+GA D + G STFM EMLE + + AT+RS+I+ D
Sbjct: 623 AQIGSFVPCEEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEANNAITHATNRSMILFD 682
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
E+GRGTSTYDG LA +I E++ E I+A TLF+TH+HELT L E + + N
Sbjct: 683 EIGRGTSTYDGMALAQSIVEYIHENIKAKTLFSTHYHELTTLESE---------LGSLKN 733
Query: 803 YHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
HV A + K+ L++V+ GA D+S+GIHVAE A P V+T A E E
Sbjct: 734 VHVRA--EEVDGKVVFLHQVKEGAADKSYGIHVAELAELPSEVITRAERLLEEFE 786
>gi|254167004|ref|ZP_04873857.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623860|gb|EDY36422.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 823
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 218/680 (32%), Positives = 344/680 (50%), Gaps = 60/680 (8%)
Query: 251 VSGFEIAPGALGAL---LSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE 305
+SGF I L A L YA+ ++D N + ++ Y D Y+ LDS ++ L +
Sbjct: 197 LSGFGIGEYGLMAAASALKYAKENTMNDLKNITS--LQGYFKDKYLILDSTTLKNLEIFH 254
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ +K ++L+ MN+ C MG RLL W+++PL D++EIN RLD V+ + L+
Sbjct: 255 NVLGEDK-YTLYHTMNK-CETPMGARLLKRWMQRPLKDIDEINDRLDAVEELANKQLLQD 312
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
+R L RI DIER+ + RA + ++ L +S + +R + S ++K
Sbjct: 313 SIRTILSRIKDIERIKTRVSLGRAVPRDLISLKESLKQADKLRINFE------SKILKN- 365
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
S + + I L+E +++ D GE +I Y+ L +K + + I
Sbjct: 366 ------SASKIYGIEGIIELIENAINGD-YPVGEGVIKEGYNEELDEIKRIASNAKLLIG 418
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+ ++ + K LK+ G+ ++K K+ K + +T K+ +F
Sbjct: 419 KMEERERRSTGI---KNLKIGYNDVMGYYIEVSKSNLSKVPKHYRRK----QTLKNSERF 471
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
+LK L + + + ++ +++ ++ + A ++ +DV+ S A +
Sbjct: 472 ITDELKDLEYKILSAKDRIYEIENKIYKDILKKLGEMIDVIERTAKSIAIIDVISSLARV 531
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPN 665
A YTRP+++ + DI + RHP VE + +F+PND I + F I+TGPN
Sbjct: 532 A--LEMNYTRPEVD--ESMDIEIRNGRHPVVEL--YTDFVPNDTH-INSAARFIILTGPN 584
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST++RQV + +++AQ+GSFVP D A I + D I+ RVGA D RG STFM EM+E
Sbjct: 585 MAGKSTYMRQVALIVILAQMGSFVPADYAKIGIVDRIYTRVGASDDITRGRSTFMMEMVE 644
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
A+IL AT+RSLI++DE+GRGTSTYDG +AW+I EH+ IRA T+FATH+H L L
Sbjct: 645 LANILNTATERSLILLDEIGRGTSTYDGLAIAWSITEHIHNSIRARTIFATHYHHLIDL- 703
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
EN + V NYH++ + T L + KV PG +S+GI VA+ A PE V
Sbjct: 704 -ENV-------LDNVRNYHIA--VKETQDGLIFVRKVMPGGMSKSYGIEVAKLAGVPEKV 753
Query: 846 VTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPL 905
V A+E +I + IEV +K I M G L E M +
Sbjct: 754 VKRAKEIL---------NLIEEKKVIEVRRGKKIIQ---TMLFGEENCSDILDEIKRMDI 801
Query: 906 ETMDLKEALERVKRMKDDLE 925
+ EAL ++ +K +E
Sbjct: 802 MNLTPLEALNKLNELKRKIE 821
>gi|268326266|emb|CBH39854.1| DNA mismatch repair protein [uncultured archaeon]
Length = 864
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 266/931 (28%), Positives = 435/931 (46%), Gaps = 107/931 (11%)
Query: 24 FYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKN 83
+Y+ + A+ FF D+Y GE+A +K AL G G A + ++
Sbjct: 11 YYQIKEKYSDAIIFFRVGDFYETFGEDAKVASK---ELNIALTATGRGKGATGKIPMAGV 67
Query: 84 MFETIA---RDLLLERTDHTL-ELYEGSGSN----WRLVKSGTPGNLGSYEDVLFANNEM 135
+ + + L+++ + E E S +V+ TPG + ED F
Sbjct: 68 PYHAVTPYIKQLIMKGYKVAICEQIEDKASKKIEKREVVRLITPGTI--IEDA-FLEERH 124
Query: 136 QDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLL 195
+ + V L G +G+ VD++ L E D+S N L + E +L
Sbjct: 125 SNYLMCVNLL------GGKVGIAIVDVSTGEFSLTELEDESSLLN---ELERVKPAEIIL 175
Query: 196 PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKT--RDLVQDLDRLVRGSVEPVRDLVSG 253
P + L L C + + ++K L+ G + S
Sbjct: 176 P-------DSLELELELDTCTISRYDDYYFDYKNAYTTLINHF-----GVISLDGFGCSD 223
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDA 310
++ A GA+ SY L D +I+ + + YM LDS +R L + + D
Sbjct: 224 LKVGITAAGAVTSY---LRDTQKRILAHIKSPKTFFISDYMVLDSVTVRNLEIFNNIRDG 280
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+ +L ++++T T GMG RLL L+ PLLD EI +R ++V AF D LR+ L+
Sbjct: 281 TQRGTLVSVLDKTLT-GMGSRLLKKNLQFPLLDPGEIRSREEVVNAFYGDILLRESLKTV 339
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
K ISD+ER++ + A + ++ L +S +++ +R L+ + + D L
Sbjct: 340 FKEISDMERIISRVSYGNANARDLIALKRSLMQIEVLRETLKNSRAK-------KIKDVL 392
Query: 431 ESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
+L +K +ALVE ++ + E G +I +++T L L+ + + R +
Sbjct: 393 RALKSST-FSKVVALVERAIIEEPPITVKEGG--LIKETFNTELDELRTIKHAGRRWLAE 449
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
+ ++ + K+LK+ FG+ + K K+ T +I +T + ++
Sbjct: 450 FEEHEKANTGI---KSLKVGYNKVFGYYIEVRKSWIAKV----PTTYIRKQTLTEAERYI 502
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
+LK + E K + EL R+ + + + A ++ELD+LL+FA++A
Sbjct: 503 TEELKVYEAKALSAEERIKELEYELFERIRKEVAKQGKEIQEAANSIAELDMLLAFAEVA 562
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNM 666
+ Y P ++ D +I++ RHP VE F+PN+ +L + + IITGPNM
Sbjct: 563 AG--NGYCCPVVDESD--EIVIVEGRHPVVEKGVRDGFVPNNIQLDKN-NRLMIITGPNM 617
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKSTF+RQ + LMAQ+GSFVP A + V D IF RVGA D G S+FM EM ET
Sbjct: 618 SGKSTFMRQTALITLMAQLGSFVPAKEARVGVVDRIFTRVGAYDDLSMGQSSFMVEMSET 677
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
A+IL AT+RSLII+DE+GRGTST DG +AW++ E++ E I A TLFATHF+ELT L
Sbjct: 678 ANILNNATERSLIILDEIGRGTSTLDGVSIAWSVAEYVHERINAKTLFATHFYELTEL-- 735
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
A+ ++ + V+ I + ++ + KV G +S+GI VA+ A PE V+
Sbjct: 736 --ADSLDSTKCFNVS-------IKEVADEIFFVRKVVEGRGTKSYGIQVAKLAGLPEEVI 786
Query: 847 TLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA----------HQF 896
A+ S +I + ++E S+RK ++ RG +A H
Sbjct: 787 ESAK-----------SMLIRMEREVEKESERK-----DEGERGVKKAEVKKEYVVQTHPV 830
Query: 897 LKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
++E + LE + EAL ++ MK +D
Sbjct: 831 VEELRAINLEKISPIEALNKLYEMKKKSHRD 861
>gi|448584765|ref|ZP_21647508.1| DNA mismatch repair protein MutS [Haloferax gibbonsii ATCC 33959]
gi|445727619|gb|ELZ79229.1| DNA mismatch repair protein MutS [Haloferax gibbonsii ATCC 33959]
Length = 919
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 232/707 (32%), Positives = 355/707 (50%), Gaps = 65/707 (9%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
T GL VD++ E L T + AL AL E L P E V +C L D
Sbjct: 169 TYGLAVVDVST-----GECL----VTGADRAL-ALEELERLAPAELVVGPDCD-LPD--- 214
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
+ + +T F+ D R + P D V + A+GA L+YAE
Sbjct: 215 ----LSFDPMETPFEPGAFDADAARETLSAYAPRPDAVVESDAELRAVGAALAYAEYAQG 270
Query: 274 ESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKR 331
+S Y R D +++LD+ A+R+L + ES++ A +LF +++ T A +G+R
Sbjct: 271 DSTL-EYVTRVTRFDPREFLQLDATAIRSLELFESRS-ARAGSTLFSVLDETACA-LGRR 327
Query: 332 LLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGL 391
L WL++PL+D +EI ARLD V A DD R DLR+HL + D+ERL+ + + RA
Sbjct: 328 RLEAWLRRPLVDRDEIEARLDAVDALCDDALARADLREHLSSVYDLERLVARVSRERADA 387
Query: 392 QQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD 451
+ + L + R+P +R + G S L+ + D L+ L D + + S
Sbjct: 388 RDLRSLKTTLDRVPKVREEV----GTGSDLLAD-LRDSLDELED---VRDLVGDAIVSDP 439
Query: 452 LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKALKLDKGT 509
++ G +I+ +D L ++ E+ + +L +Q + +D +L++
Sbjct: 440 PQEITEG-GVIADGFDAELDDIRGTAEAGREWVSNLEAREQERTGID-----SLEVGYNQ 493
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
G+ +T P + ++ + +T K+ +F +LK+ D+ + + +
Sbjct: 494 VHGYYIEVTN---PNL-DRVPDDYRRRQTLKNSERFYTPELKEREDEILRASDRADALEY 549
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV----GD 625
+L V T S +++A L++LDVL + AD+A + Y RP+ + D G
Sbjct: 550 DLFCEVRADVATESARIQAVADALADLDVLRTLADVAVA--NDYARPEFHAGDPTDEHGG 607
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
I ++G RHP VE AQD F+PN L RG ++TGPNM GKST++RQV + ++AQ
Sbjct: 608 IHIDGGRHPVVERAQD--EFVPNPADLPRGS--VALVTGPNMSGKSTYMRQVALGCVLAQ 663
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
VGSFVP A + V D +F R+GA D G STFM+EM E IL AT SL+++DE+
Sbjct: 664 VGSFVPAASARLPVLDRVFTRIGASDDIAGGQSTFMREMSELTEILHNATGDSLVLLDEV 723
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTST DG +A A E L +E+ A TLFATH+H+LT A + GV N H
Sbjct: 724 GRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDRE---------GVFNLH 774
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
+A ++T L+ V G S+G+ VA+ A P SVV AR+
Sbjct: 775 FTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPASVVARARD 819
>gi|419718740|ref|ZP_14246046.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum
F0468]
gi|383305080|gb|EIC96459.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum
F0468]
Length = 880
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 220/687 (32%), Positives = 347/687 (50%), Gaps = 47/687 (6%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+S F A A GA+L Y + S I Y YM +D+++ R L ++E+ +
Sbjct: 226 LSEFTDATVASGAMLRYLYEMQKSSCAQIVSISAYKNGDYMIVDTSSRRNLELVETMREK 285
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
KN SL G++++T TA MG R+L +L+QPL++ I R + V + R++LR++
Sbjct: 286 KKNGSLLGVLDKTSTA-MGARMLRSFLEQPLINRERILNRQEAVAELFERYIDREELREY 344
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L + D+ERLM + + A + ++ L S + I+ L + E LD L
Sbjct: 345 LNPVYDLERLMARVVTKNANTRDLLSLSASMKMIAPIKEVLNNCTSGEIVRVNEG-LDRL 403
Query: 431 ESLTDDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
E + D +++ +V+ D L+ G +I++ Y+ + L+ + + + SL
Sbjct: 404 EDIID---------IIDRAVNEDSPLSLKEGN-IINTGYNAEIDKLRQAKTEGKNWLASL 453
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
+ K LK+ FG+ F +T + + F+ +T + ++T
Sbjct: 454 EADEKEKTGI---KNLKIKYNKVFGYYFEVTNS----FKDMVPDYFVRKQTLTNAERYTT 506
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
LK+L + ++ N + E+ V T +S A L+ +D + S A +A
Sbjct: 507 DNLKELENIILGAEDKLNNLEYEVFTEVRDTVADNVNRIQSSAKSLAYIDAICSLATVAY 566
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNM 666
+ YTRP IN V DI + RHP VE+ + FI ND L + K IITGPNM
Sbjct: 567 N--NNYTRPQINTNGVIDI--KDGRHPVVESMLGDDSFIANDTYLDQNKKRMSIITGPNM 622
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST++RQ + +MAQ+GSFVP +AS+ V D IF RVGA D G STFM EM E
Sbjct: 623 AGKSTYMRQTALICMMAQIGSFVPASQASLCVCDRIFTRVGASDDLASGQSTFMVEMTEV 682
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTAL 784
A+IL+ AT SL+I+DE+GRGTST+DG +AWA+ EH+ ++ I A TLFATH+HEL+ L
Sbjct: 683 ANILRNATRNSLVILDEIGRGTSTFDGLAIAWAVVEHISNIKLIGAKTLFATHYHELSEL 742
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
+ GV NY + + + L K+ G D+S+GI VA+ A PES
Sbjct: 743 EG---------TLPGVNNYCI--LVKERGDNIVFLRKIVTGGADKSYGIQVAKLAGVPES 791
Query: 845 VVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG------AARAHQFLK 898
V A+E EL + + A+ V SKRK + P+++ G A ++
Sbjct: 792 VTERAKELIEELSGADIATRAREIAEAAV-SKRKPVKRPDEVESGQLSLFDAVNNDSIIE 850
Query: 899 EFSDMPLETMDLKEALERVKRMKDDLE 925
E S + + +M +AL + +++ ++
Sbjct: 851 EISKIDITSMTPMDALNTLYALQNKIK 877
>gi|291280540|ref|YP_003497375.1| DNA mismatch repair ATPase MutS [Deferribacter desulfuricans SSM1]
gi|290755242|dbj|BAI81619.1| DNA mismatch repair ATPase MutS [Deferribacter desulfuricans SSM1]
Length = 851
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 214/653 (32%), Positives = 340/653 (52%), Gaps = 64/653 (9%)
Query: 286 SLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVN 345
+L+ + LDS A+ L +++++ D + +LF ++N C +G+RLL L +PL D+N
Sbjct: 248 NLNDELYLDSIAVNTLELVKNQRDGSVKNTLFQVLN-FCKTALGERLLKFTLLRPLRDLN 306
Query: 346 EINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP 405
+I R ++V+AF+ D L+ +++ LK + DIER+ L +RA + +V L S LP
Sbjct: 307 KIKYRQNVVEAFIFDQELKNNIQNLLKNVYDIERIASRLSAKRANARDLVWLKNSIKVLP 366
Query: 406 YIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYMI 462
I++ L E++ D+L L++ S+ D Q+ G +I
Sbjct: 367 EIKAYLINSNDPILKEFGEQF----------DNLEDIYELIDKSIVDDPPLQITAGG-II 415
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
+ ++ + LK ++ + + ++ + LK+ FG+ ++K
Sbjct: 416 KTGFNNHIDELKKVKDDSTTLLARIEQKEREKTGI---TNLKVKYNKVFGYYIEVSKSHL 472
Query: 523 PK-----IRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
K IRK+ +FI E ++ VK + K +YQ+ +E + +KE+
Sbjct: 473 SKVPDYFIRKQTLVNAERFITDELKELEVKILEAESKLTELEYQQFIEIREKVEKEI--- 529
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI-ILEGSRH 633
E +S A ++ LD+LLSF++ A YT+P IN D +I I+EG RH
Sbjct: 530 ---------ERIRSQANKIALLDMLLSFSEAA--IRYEYTKPHIN--DSNEIKIIEG-RH 575
Query: 634 PCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
P +E F+PND + K IITGPNM GKST++R + ++A GSFVP
Sbjct: 576 PVIEQTMNEPFVPNDIFINTEKDRLLIITGPNMAGKSTYLRMTALITILAHTGSFVPAKE 635
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A+I + D IF R+GA D +G STFM EM+ETA+IL AT++SLII+DE+GRGTSTYDG
Sbjct: 636 ANIGLVDRIFTRIGASDNLAKGESTFMVEMVETANILNNATEKSLIILDEIGRGTSTYDG 695
Query: 754 FGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
+AWA+ E++ + I+A TLFATH+HELT +A GV NY + + +
Sbjct: 696 LSIAWAVAEYISKYIKAKTLFATHYHELTDIAL---------TTYGVKNYTI--EVREWN 744
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV 873
++ L K+ PG+ D+S+GIHVA+ A PE V+ A E A LE S D ++
Sbjct: 745 DEVIFLRKIIPGSADRSYGIHVAKLAGLPEEVINRANEILATLE----KNEFSIDGSPKL 800
Query: 874 GSKRK-RISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLE 925
K + I +P + H ++E ++ + M EAL + ++K LE
Sbjct: 801 AKKSEVVIREPVLIFED----HPVIEELRNIDINNMTPLEALNTLAKLKGMLE 849
>gi|418620515|ref|ZP_13183319.1| DNA mismatch repair protein MutS [Staphylococcus hominis VCU122]
gi|374822645|gb|EHR86665.1| DNA mismatch repair protein MutS [Staphylococcus hominis VCU122]
Length = 873
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 227/681 (33%), Positives = 343/681 (50%), Gaps = 81/681 (11%)
Query: 211 ALTRCGVMLTERKKTEFKTR-------------------DLVQDLDRLVRGSVEP--VRD 249
AL+ C V E K T F+ D+ +DL + + + E VR+
Sbjct: 138 ALSYCDVSTGELKATNFEDESTLINEIITINPNEIVVREDINEDLKKQISLTTETITVRE 197
Query: 250 LVSGFEIAPGALGALLSY--AELLSDESNYGNYY-------IRKYSLDSYMRLDSAAMRA 300
+S E + L L + +LL D ++ + Y+ +M++D A R
Sbjct: 198 EISDIEYSVNTLENNLMFLTTQLLLDYIHHTQKRDLSHIEDVITYAAIDFMKMDYYAKRN 257
Query: 301 LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
L + ES +K +L LM+ T T MG R L W+ +PL+ + I RLDIV++F+D
Sbjct: 258 LELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIHKDNIEQRLDIVESFIDH 316
Query: 361 TALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEG---- 416
R LR +L ++ DIERL+ + + +++L S +P I+S L+Q +
Sbjct: 317 FIERDTLRGYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIKSLLEQMDNVTTT 376
Query: 417 QFSSLIKERYLDPLESLTD--DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALK 474
QFS+L +PLE L +D L + E + + + S D L A K
Sbjct: 377 QFSTL------EPLEDLLKVLEDSL-----VEEPPISVKDGGLFKQGFSKQLDEYLEASK 425
Query: 475 NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE----EPKIRKKLT 530
N ++ L + ++T K+LK+ FG+ IT+ EP
Sbjct: 426 NGKDWLAQLQAKERERTGI-------KSLKISYNKVFGYFIEITRANLQGFEPSEHGYHR 478
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
Q T + +F +LK+ D ++ + +L R+ + +++E + A
Sbjct: 479 KQ-----TLSNAERFITDELKEKEDIILGAEDKAIELEYQLFIRLREHVKSYTERLQRQA 533
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDC 649
++SELD L SFA++A Y RP+ + D + LE SRHP VE D+ +++PNDC
Sbjct: 534 KVISELDCLQSFAEIAQKYN--YVRPEFS--DDKTLNLENSRHPVVERVMDYNDYVPNDC 589
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
L + ++ +ITGPNM GKST++RQV + +MAQ+G++VPCD A + + D IF R+GA
Sbjct: 590 YLDQN-NFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDNAILPIFDQIFTRIGAA 648
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR 769
D + G STFM EMLE L AT SLII DE+GRGTSTYDG LA A+ E++ E
Sbjct: 649 DDLVSGKSTFMVEMLEAQKALTYATADSLIIFDEIGRGTSTYDGLSLAQAMIEYVAETSH 708
Query: 770 APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQ 829
A TLF+TH+HELT L +Q+ + N HV+A D +L L+KV+ GA D
Sbjct: 709 AKTLFSTHYHELTTL---------DQQLSSLKNVHVAA--DEYQGELIFLHKVKEGAVDD 757
Query: 830 SFGIHVAEFANFPESVVTLAR 850
S+GI VA+ AN PE V+ A+
Sbjct: 758 SYGIQVAKLANLPEKVIERAQ 778
>gi|448610427|ref|ZP_21661173.1| DNA mismatch repair protein MutS [Haloferax mucosum ATCC BAA-1512]
gi|445745051|gb|ELZ96521.1| DNA mismatch repair protein MutS [Haloferax mucosum ATCC BAA-1512]
Length = 939
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 315/602 (52%), Gaps = 46/602 (7%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLF 317
A+GALL+YAE +S Y R D +++LD+ A+R+L + +S++ A +LF
Sbjct: 249 AVGALLAYAEYAQGDSKL-EYVTRVTRFDPREFLQLDATAIRSLELFDSRS-ARAGSTLF 306
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
+++ T A +G+R L WL++PL+D + I ARLD V A DD R DLR HL + D+
Sbjct: 307 SVLDETACA-LGRRRLEAWLRRPLVDRDAIEARLDAVDALCDDALTRADLRDHLSAVYDL 365
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + + RA + + L + R+P IR AL + + + D ESL + D
Sbjct: 366 ERLVARVSRERANARDLRSLKTTLDRVPDIREALAETDADLLA-------DCRESLPELD 418
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
+ + S ++ +G +I+ +D L L+ E+ + L + +
Sbjct: 419 GVRDLVGRALVSDPPQEITDG-GVIADGFDAELDDLRGTAEAGREWVSKLEAEERERTGI 477
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
+L++ G+ +T P + ++ ++ +T K+ +F +LK+ D+
Sbjct: 478 ---DSLEVGYNQVHGYYIEVTN---PNL-DRVPDDYVRRQTLKNSERFYTPELKEREDEI 530
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ + + +L V SE +++A +L++LDVL + AD+A + YTRP+
Sbjct: 531 LRAADRADALEYDLFCEVRADVAAESERIQAVADVLADLDVLRTLADVAVA--NDYTRPE 588
Query: 618 INPPDVGD--------IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
G+ I ++ RHP VE AQD F+PN L G +ITGPNM G
Sbjct: 589 FRTEGPGESDRTSDGGIEIDAGRHPVVERAQD--EFVPNPASLPAGS--VTLITGPNMSG 644
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQV + ++AQ+GSFVP + A + V D +F R+GA D G STFM+EM E
Sbjct: 645 KSTYMRQVALVCILAQMGSFVPANAARVPVIDRVFTRIGASDDIAGGQSTFMREMSELTD 704
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL ATD SL+++DE+GRGTST DG +A A E + +EI A TLFATH+H+LT +A +
Sbjct: 705 ILHNATDDSLVLLDEVGRGTSTADGLAIARAATEFIHDEIGATTLFATHYHDLTDVAADR 764
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
FN + +A D ++T L+ V G S+G+ VA A P +VV
Sbjct: 765 ETVFNL--------HFTAAQRDG---EVTFLHSVADGPSSSSYGVEVAHLAGVPGTVVDR 813
Query: 849 AR 850
AR
Sbjct: 814 AR 815
>gi|337737054|ref|YP_004636501.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
gi|384458562|ref|YP_005670982.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|325509251|gb|ADZ20887.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|336293249|gb|AEI34383.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
Length = 869
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 211/658 (32%), Positives = 349/658 (53%), Gaps = 58/658 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++KY + ++ +D + R L + E+ D +K SL ++++T TA MG R + W+++PL
Sbjct: 251 LQKYEIVDFLSIDINSRRNLELTETLKDKSKKGSLLWVLDKTSTA-MGGRQIRKWIERPL 309
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D +IN RLD V+ + + + +DL++ LK++ DIERL + + ++++ L S
Sbjct: 310 IDDEKINLRLDAVEEMLTNVSYNEDLKELLKQVYDIERLAGKISSKSVNAKEMISLRGSI 369
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
+LP I+ ++ + + L +E+ DD L L+ S++ + ++ G
Sbjct: 370 EKLPAIKKLIKNFNSEL--------LVNMENALDD--LGDIYKLLYESINDNPSLSIKEG 419
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I Y+ + L+ + ++ I SL ++ ++ K+LK+ FG+ IT
Sbjct: 420 N-IIKEGYNKDIDELRLAKSHGKQWIASLEN---TEREVTGIKSLKVSYNKVFGYYIEIT 475
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVN 573
K + + ++I +T + ++ +LK+ LG + + VL EY N E+
Sbjct: 476 KSNLNLVPE---GRYIRKQTLTNSERYITPELKEMEEKILGAEEKLVLLEY-NVFCEIRE 531
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRH 633
R+ + + K A +LSELD + SFAD+A Y +P I G ++++ RH
Sbjct: 532 RIEKEI----DRIKGSAKILSELDCICSFADVARE--NNYCKPVIKRD--GTLVIKEGRH 583
Query: 634 PCVEAQDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
P VE NF+ ND + + +ITGPNM GKST++RQVG+ +LMAQ+G FVP
Sbjct: 584 PVVEKVIASGNFVANDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPAS 643
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
A IS+ D IF R+GA D G STFM EM E ++ILK AT SLI++DE+GRGTSTYD
Sbjct: 644 AAEISICDKIFTRIGASDDLNAGKSTFMVEMWEVSNILKNATKNSLILLDEVGRGTSTYD 703
Query: 753 GFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID 810
G +AW++ E++ E ++ TLFATH+HELT L E + G+ NY ++ +
Sbjct: 704 GLSIAWSVIEYICKSENLKCKTLFATHYHELTKLEGE---------IEGLKNYSIA--VK 752
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP-SAVISDDA 869
+ + L K+ D+S+GI VA+ A PE V+ ARE +LE+ P +A ++D
Sbjct: 753 KVNDDIIFLRKIISKGADESYGIEVAKIAGLPEEVLVRAREILKDLEEAKPKTAENTEDK 812
Query: 870 KIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM------PLETMD-LKEALERVKRM 920
K + + + D + LKE D P+E M+ L E ++R K++
Sbjct: 813 KTNIVKEEPK-KDSYQIDFNYLERESILKELKDTEIMDMNPIECMNKLYEFIKRAKKL 869
>gi|268325178|emb|CBH38766.1| DNA mismatch repair protein [uncultured archaeon]
Length = 864
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 266/931 (28%), Positives = 435/931 (46%), Gaps = 107/931 (11%)
Query: 24 FYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKN 83
+Y+ + A+ FF D+Y GE+A +K AL G G A + ++
Sbjct: 11 YYQIKEKYSDAIIFFRVGDFYETFGEDAKVASK---ELNIALTATGRGKGATGKIPMAGV 67
Query: 84 MFETIA---RDLLLERTDHTL-ELYEGSGSN----WRLVKSGTPGNLGSYEDVLFANNEM 135
+ + + L+++ + E E S +V+ TPG + ED F
Sbjct: 68 PYHAVTPYIKQLIMKGYKVAICEQIEDKASKKIEKREVVRLITPGTI--IEDA-FLEERH 124
Query: 136 QDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLL 195
+ + V L G +G+ VD++ L E D+S N L + E +L
Sbjct: 125 SNYLMCVNLL------GGKVGIAIVDVSTGEFSLTELEDESSLLN---ELERVKPAEIIL 175
Query: 196 PTEAVKSSECKTLRDALTRCGVMLTERKKTEFKT--RDLVQDLDRLVRGSVEPVRDLVSG 253
P + L L C + + ++K L+ G + S
Sbjct: 176 P-------DSLELELELDTCTISRYDDYYFDYKNAYTTLINHF-----GVISLDGFGCSD 223
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDA 310
++ A GA+ SY L D +I+ + + YM LDS +R L + + D
Sbjct: 224 LKVGITAAGAVTSY---LRDTQKRILAHIKSPKTFFISDYMVLDSVTVRNLEIFNNIRDG 280
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+ +L ++++T T GMG RLL L+ PLLD EI +R ++V AF D LR+ L+
Sbjct: 281 TQRGTLVSVLDKTLT-GMGSRLLKKNLQFPLLDPGEIRSREEVVNAFYGDILLRESLKTV 339
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
K ISD+ER++ + A + ++ L +S +++ +R L+ + + D L
Sbjct: 340 FKEISDMERIISRVSYGNANARDLIALKRSLMQIEVLRETLKNSRAK-------KIKDVL 392
Query: 431 ESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
+L +K +ALVE ++ + E G +I +++T L L+ + + R +
Sbjct: 393 RALKSST-FSKVVALVERAIIEEPPITVKEGG--LIKETFNTELDELRTIKHAGRRWLAE 449
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
+ ++ + K+LK+ FG+ + K K+ T +I +T + ++
Sbjct: 450 FEEHEKANTGI---KSLKVGYNKVFGYYIEVRKSWIAKV----PTTYIRKQTLTEAERYI 502
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
+LK + E K + EL R+ + + + A ++ELD+LL+FA++A
Sbjct: 503 TEELKVYEAKALSAEERIKELEYELFERIRKEVAKQGKEIQEAANSIAELDMLLAFAEVA 562
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNM 666
+ Y P ++ D +I++ RHP VE F+PN+ +L + + IITGPNM
Sbjct: 563 AG--NGYCCPVVDESD--EIVIVEGRHPVVEKGVRDGFVPNNIQLDKN-NRLMIITGPNM 617
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKSTF+RQ + LMAQ+GSFVP A + V D IF RVGA D G S+FM EM ET
Sbjct: 618 SGKSTFMRQTALITLMAQLGSFVPAKEARVGVVDRIFTRVGAYDDLSMGQSSFMVEMSET 677
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
A+IL AT+RSLII+DE+GRGTST DG +AW++ E++ E I A TLFATHF+ELT L
Sbjct: 678 ANILNNATERSLIILDEIGRGTSTLDGVSIAWSVAEYVHERINAKTLFATHFYELTEL-- 735
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
A+ ++ + V+ I + ++ + KV G +S+GI VA+ A PE V+
Sbjct: 736 --ADSLDSTKCFNVS-------IKEVADEIFFVRKVVEGRGTKSYGIQVAKLAGLPEEVI 786
Query: 847 TLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARA----------HQF 896
A+ S +I + ++E S+RK ++ RG +A H
Sbjct: 787 ESAK-----------SMLILMEREVEKESERK-----DEGERGVKKAEVKKEYVVQTHPV 830
Query: 897 LKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
++E + LE + EAL ++ MK +D
Sbjct: 831 VEELRAINLEKISPIEALNKLYEMKKKSHRD 861
>gi|219117187|ref|XP_002179388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409279|gb|EEC49211.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 363
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/351 (46%), Positives = 224/351 (63%), Gaps = 16/351 (4%)
Query: 512 GHVFRITKKEEPKI-RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKE 570
G +FR+T + K+ + +L + + K+GV F+ +L++L Q ++ EY QK
Sbjct: 24 GFLFRLTNTNDTKLLQNQLGNVVQIHKLLKNGVSFSTKELRQLATAQQDLMAEYDRQQKV 83
Query: 571 LVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD-INPPDVGD--II 627
+V ++ A T+S + + ++ LDVL+ A A+ P Y RP I+ D I
Sbjct: 84 VVQDALKVAATYSVVLQRAFDAVATLDVLVGLAHQAAYSPHGYCRPTLIDGDDCAGHGIQ 143
Query: 628 LEGSRHPCVEAQDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
L+G+RHPCVE Q+ V ++IPND L +S ++TGPNMGGKST+IR VG +L+AQ+G
Sbjct: 144 LQGARHPCVEVQESVSDYIPNDVDLTHDRSNVLLVTGPNMGGKSTYIRAVGAIVLLAQIG 203
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
+FVPC A+I +R I ARVGAGD Q +G+STF+ EMLE+A+IL+ AT RSLII+DELGR
Sbjct: 204 AFVPCQSATIHIRHHILARVGAGDWQDQGISTFLAEMLESAAILRTATARSLIIVDELGR 263
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTST+DG+GLA AI E++V + +FATHFHELT+LA N V N HV+
Sbjct: 264 GTSTFDGYGLARAIAEYMVRNVGNLCVFATHFHELTSLADVFTN---------VRNCHVT 314
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
A D + LT LY+++PG C +SFGI VAE A P VV A+ KA ELE
Sbjct: 315 AQRD--VQGLTFLYQIQPGPCLESFGIQVAELAGVPAVVVQDAQRKARELE 363
>gi|94969724|ref|YP_591772.1| DNA mismatch repair protein MutS [Candidatus Koribacter versatilis
Ellin345]
gi|189030434|sp|Q1IN52.1|MUTS_KORVE RecName: Full=DNA mismatch repair protein MutS
gi|94551774|gb|ABF41698.1| DNA mismatch repair protein MutS [Candidatus Koribacter versatilis
Ellin345]
Length = 882
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 327/651 (50%), Gaps = 53/651 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESK-TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
Y + + LD+ +R L ++E T+ + +LF ++ T T MGKRLL W+ +P +D
Sbjct: 275 YERQNCLVLDAVTVRNLELIEPLFTNTGEGVTLFRALDATMTP-MGKRLLRAWMLRPSID 333
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+EINARLD ++ V DT R++LR+ + I DIERL+ + A + ++ L Q R
Sbjct: 334 TSEINARLDAIEMQVVDTLGREELRRAMDGILDIERLLSRVTLETANPRDLLALAQCFGR 393
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALV-ETSVDLDQLENGEYMI 462
LP +R+A+Q++ + L L D F LV E + L N ++
Sbjct: 394 LPKVRAAMQRFTSA-----RFLVLHGLLDDLADLRDRIFTTLVDEPPITL----NDGGVV 444
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
D L L+N + ++ I + ++ + +LK+ FG+ I+
Sbjct: 445 REGLDAALDELRNLSHNSKQFIAQIEERERKRTGI---GSLKIKFNNVFGYYLEISNAN- 500
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLK----KLGDQYQKVLEEYKNCQKELVNRVIQT 578
+ + +T + +FT +LK K+ D +K++E + EL +
Sbjct: 501 ---KHLAPADYERKQTLVNAERFTTPELKEYEAKVLDAQEKIVEIERRIFGELRTAIAAE 557
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
A + L+E+DVL +FA LA++ Y RP + G+ L +RHP +E
Sbjct: 558 A----RRVRQTGLALAEVDVLANFAHLAAT--RNYCRPKFD--QSGEFELIEARHPVIEL 609
Query: 639 QDWVN----FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
+ F+PND L ++TGPNMGGKST++RQ + +MAQ+GSFVP A
Sbjct: 610 PELTGSADRFVPNDLYLNATTHTVIVLTGPNMGGKSTYLRQAALVAVMAQMGSFVPARSA 669
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+SV D +F R+GA D RG STFM EM ETA+IL ATDRSLI++DE+GRGTSTYDG
Sbjct: 670 RLSVVDRVFTRIGAADNLARGRSTFMVEMTETAAILNTATDRSLILLDEVGRGTSTYDGL 729
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
+AWA E L RA LFATH+HELT LA E + GV NYHVS + +
Sbjct: 730 AIAWACIEFLHARTRAKALFATHYHELTVLADE---------LSGVKNYHVS--VKESGG 778
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVG 874
+ L +VEPGA D+S+GI VA+ A P V+ AR E E A
Sbjct: 779 NVVFLRRVEPGAADKSYGIEVAKLAGLPAEVIERARAVLKEHESVERQATSHL------- 831
Query: 875 SKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLE 925
SK +R SD ++ + + + + + L + EAL + +K L+
Sbjct: 832 SKDERGSDSMQLTIFTPLSQKIVDQLKETDLNRLTPIEALNLLHELKKQLD 882
>gi|291546135|emb|CBL19243.1| DNA mismatch repair protein MutS [Ruminococcus sp. SR1/5]
Length = 872
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 210/645 (32%), Positives = 330/645 (51%), Gaps = 50/645 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
IR YS + YM +DS++ R L ++E+ + K SL ++++T TA MG R L +++QPL
Sbjct: 252 IRPYSAEKYMLIDSSSRRNLELVETMREKQKRGSLLWVLDKTKTA-MGARTLRSYVEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D EI RL ++ R ++R++L I D+ERL+ + + A + +V S
Sbjct: 311 IDAEEIEKRLGALEELNAKPMDRDEIREYLNPIYDLERLISRISYKSANPRDLVSFASSL 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
LPYI+ L +++ I E +DPL +TD L+ S+ L Q +
Sbjct: 371 EMLPYIKQILAEFKSPLLMQINED-MDPLSDITD---------LIRNSIADDPPLAQKDG 420
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
G +I Y+ + + + ++ + L + + K+LK+ FG+ +
Sbjct: 421 G--IIREGYNEDVDKFRRSRTDGKKWLSELEARERERTGI---KSLKIKYNRVFGYSLEV 475
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ 577
T + + +I +T + ++ +LK L D ++ + EL + +
Sbjct: 476 TNT----FKDLVPEDYIRKQTLTNAERYITQELKDLEDLILGAEDKLYALEFELFSDIRD 531
Query: 578 TAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE 637
+ A ++ LDV S A +A + RP IN + G I + RHP VE
Sbjct: 532 QVGAEVVRIQRTAKAVAALDVFASLALVAQR--NNFVRPKIN--ETGLIDIRNGRHPVVE 587
Query: 638 AQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
+ FIPND L K IITGPNM GKST++RQ + +LMAQ+GSFVP D A+I
Sbjct: 588 QMIENDMFIPNDTYLDNHKKRISIITGPNMAGKSTYMRQTALIVLMAQIGSFVPADSANI 647
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
V D IF RVGA D G STFM EM E A+IL+ AT RSL+I+DE+GRGTST+DG +
Sbjct: 648 GVVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSRSLLILDEIGRGTSTFDGLSI 707
Query: 757 AWAICEHL--VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
AWA+ EH+ + A TLFATH+HELT L ++ GV NY ++ +
Sbjct: 708 AWAVIEHISNTKLCGAKTLFATHYHELTELEG---------KLSGVNNYCIA--VKEKGD 756
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVG 874
+ L K+ G D+S+GI VA+ A P+SV+ A+E EL D +A + D +
Sbjct: 757 DIVFLRKIVKGGADKSYGIQVAKLAGVPDSVIQRAKELVEELSDADITAAVKD---LTAP 813
Query: 875 SKRKRIS-DPNDMSRGA----ARAHQFLKEFSDMPLETMDLKEAL 914
K+++I+ D DM++ + + + ++E ++ + + EAL
Sbjct: 814 KKKQKITYDQLDMAQMSLFDTVQDNDIIEEIKNLEIGNLTPMEAL 858
>gi|322419136|ref|YP_004198359.1| DNA mismatch repair protein MutS [Geobacter sp. M18]
gi|320125523|gb|ADW13083.1| DNA mismatch repair protein MutS [Geobacter sp. M18]
Length = 869
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 235/731 (32%), Positives = 366/731 (50%), Gaps = 82/731 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGC---KECLLPT---EAVKSSE 204
+G GL Y+DL+ EF + + +++AL + C +E +LP+ EA ++ E
Sbjct: 134 DGECYGLSYLDLST-----GEF-RVTELSGLQAALAEVACISPREIILPSSFREAPRAKE 187
Query: 205 CKTLRDALTRCGVMLTERKKTEFKTRDLVQDLD---RLVRGSVEPVRDLVSGFEIAPGAL 261
L ++R T F+ + V D D RL+ + G P AL
Sbjct: 188 VAHLS----------SDRSITYFE--EWVYDADYCKRLIGNQFKGATAETLGCHTLPTAL 235
Query: 262 ---GALLSYAELLSDESNYGNYY----IRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
GA+L Y L+D + GN I Y + ++ LD + R L + + +D +
Sbjct: 236 LAAGAVLHY---LAD-TQKGNAPHVTGITPYCQNQHLLLDESTRRNLELTATLSDGKRKG 291
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SL GLM+RT TA MG R L W+ PL+D+ +I R D V+ ++ +R +L+ L +
Sbjct: 292 SLLGLMDRTVTA-MGGRKLKQWINYPLMDLEKIRQRQDAVEELIEAPGVRAELKTLLSGV 350
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLES 432
D+ERL + A + + L S RLP I+ +Q + L+KE +DPL+
Sbjct: 351 YDLERLNGRISLASASAKDLAALKASLSRLPAIK---EQVAPCAAPLLKELECGIDPLDE 407
Query: 433 LTDDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
+ D L+ ++ D L +G +I+ Y+ L L+ + I L
Sbjct: 408 ICD---------LITRAIVEDPPFVLRDGG-IIADGYNAELDELRAISREGKGFIARLEA 457
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
Q + +LK+ FG+ +TK I + +I +T + ++ +
Sbjct: 458 QEKGRTGI---SSLKIRYNKVFGYYIEVTKANVSAIPE----DYIRRQTLANAERYITPE 510
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
LK+ ++ + K + L +V + A E A L+ LD+L+S A+L+
Sbjct: 511 LKEYEEKVLGAEDRIKELEFSLFQQVREAAAAQGERIARTADRLACLDLLVSLAELSHD- 569
Query: 610 PTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y RP+++ + ++ + RHP +E F+PND L G++ IITGPNM G
Sbjct: 570 -RGYCRPEVH--EGSELSITEGRHPVIEEMYSSERFVPNDTFLDNGENQLIIITGPNMAG 626
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KSTF+RQV + LMAQ+GSFVP ++A I + D IF RVGA D RG STFM EM+E+A+
Sbjct: 627 KSTFMRQVALITLMAQMGSFVPAEKARIPLVDRIFTRVGASDNLARGHSTFMVEMMESAA 686
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI--RAPTLFATHFHELTALAH 786
IL+GAT +SL+I+DE+GRGTST+DG +AWA+ E L + A TLFATH+HELT LA
Sbjct: 687 ILRGATAKSLVILDEIGRGTSTFDGVSIAWAVAEFLHDNKAHAAKTLFATHYHELTELAV 746
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
G+ N++++ + S ++ L K+ PG S+GI VA A P++V+
Sbjct: 747 TRP---------GIKNFNIA--VREWSERIIFLRKIVPGGASHSYGIQVARLAGLPQAVI 795
Query: 847 TLAREKAAELE 857
A+E LE
Sbjct: 796 DRAKEILTNLE 806
>gi|15895112|ref|NP_348461.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum ATCC
824]
gi|44888237|sp|Q97I19.1|MUTS_CLOAB RecName: Full=DNA mismatch repair protein MutS
gi|15024812|gb|AAK79801.1|AE007692_9 Mismatch repair protein MutS, ATPase [Clostridium acetobutylicum
ATCC 824]
Length = 869
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 211/658 (32%), Positives = 348/658 (52%), Gaps = 58/658 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++KY + ++ +D + R L + E+ D +K SL ++++T TA MG R + W+++PL
Sbjct: 251 LQKYEIVDFLSIDINSRRNLELTETLKDKSKKGSLLWVLDKTSTA-MGGRQIRKWIERPL 309
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D +IN RLD V+ + + + +DL++ LK++ DIERL + + ++++ L S
Sbjct: 310 IDDEKINLRLDAVEEMLTNVSYNEDLKELLKQVYDIERLAGKISSKSVNAKEMISLRGSI 369
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
+LP I+ ++ + + L +E+ DD L L+ S++ + ++ G
Sbjct: 370 EKLPAIKKLIKNFNSEL--------LVNMENALDD--LGDIYKLLYESINDNPSLSIKEG 419
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I Y+ + L+ + ++ I SL ++ ++ K+LK+ FG+ IT
Sbjct: 420 N-IIKEGYNKDIDELRLAKSHGKQWIASLEN---TEREVTGIKSLKVSYNKVFGYYIEIT 475
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVN 573
K + + ++I +T + ++ +LK+ LG + + VL EY N E+
Sbjct: 476 KSNLNLVPE---GRYIRKQTLTNSERYITPELKEMEEKILGAEEKLVLLEY-NVFCEIRE 531
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRH 633
R+ + + K A +LSELD + SFAD+A Y +P I G ++++ RH
Sbjct: 532 RIEKEI----DRIKGSAKILSELDCICSFADVARE--NNYCKPVIKRD--GTLVIKEGRH 583
Query: 634 PCVEAQDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
P VE NF+ ND + + +ITGPNM GKST++RQVG+ +LMAQ+G FVP
Sbjct: 584 PVVEKVIASGNFVANDTVINNSDNVMMLITGPNMAGKSTYMRQVGLIVLMAQIGCFVPAS 643
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
A IS+ D IF R+GA D G STFM EM E + ILK AT SLI++DE+GRGTSTYD
Sbjct: 644 AAEISICDKIFTRIGASDDLNAGKSTFMVEMWEVSHILKNATKNSLILLDEVGRGTSTYD 703
Query: 753 GFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID 810
G +AW++ E++ E ++ TLFATH+HELT L E + G+ NY ++ +
Sbjct: 704 GLSIAWSVIEYICKSENLKCKTLFATHYHELTKLEGE---------IEGLKNYSIA--VK 752
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP-SAVISDDA 869
+ + L K+ D+S+GI VA+ A PE V+ ARE +LE+ P +A ++D
Sbjct: 753 KVNDDIIFLRKIISKGADESYGIEVAKIAGLPEEVLVRAREILKDLEEAKPKTAENTEDK 812
Query: 870 KIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM------PLETMD-LKEALERVKRM 920
K + + + D + LKE D P+E M+ L E ++R K++
Sbjct: 813 KTNIVKEEPK-KDSYQIDFNYLERESILKELKDTEIMDMNPIECMNKLYEFIKRAKKL 869
>gi|417909951|ref|ZP_12553684.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU037]
gi|341652560|gb|EGS76348.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU037]
Length = 715
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 82 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 140
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 141 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 200
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 201 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 249
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 250 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 299
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 300 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 353
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 354 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 409
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 410 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 468
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 469 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 528
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 529 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 578
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 579 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 619
>gi|338733719|ref|YP_004672192.1| DNA mismatch repair protein mutS [Simkania negevensis Z]
gi|336483102|emb|CCB89701.1| DNA mismatch repair protein mutS [Simkania negevensis Z]
Length = 864
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 209/624 (33%), Positives = 327/624 (52%), Gaps = 47/624 (7%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLD---SYMRLDSAAMRALNVLESK 307
+ G A A GALLSY L DE + +I++ LD SYM +D A R L + E
Sbjct: 226 LQGKVAAINATGALLSY---LQDELSLSVDHIKQIKLDHLSSYMSIDRATQRNLELTEPL 282
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
+K+ +L L++RT T MG RLL W+ PLL +I R D ++ ++ + L
Sbjct: 283 HRGSKSCTLLKLLDRTVTP-MGARLLKSWVIHPLLSPQKIQKRQDGIEELLNKQKEARLL 341
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
R+ L+ I D+ERL+ + + + + L S +P +R L F +++ + L
Sbjct: 342 REDLQNIRDLERLIMRISTGYSTPRDLSGLRFSLENIPSVREHLTP----FQAILMQTLL 397
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGE-YMISSSYDTGLSALKNEQESLERQIHS 486
L ++ H A+ T VD ++ GE +I ++ L L++ + + + I +
Sbjct: 398 SHLPDPSEITH-----AIQTTLVDEPPIKMGEGKVIRPGFNAELDELRSLKANSQSWIAN 452
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
+ + K LK+ FG+ +++ + K+ + F +T + +F
Sbjct: 453 YQAELKEATGI---KTLKITYSKAFGYCIEVSRGQA----DKMPSSFQRRQTLINSERFI 505
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
+ +LK ++ E+ + ++ L + + K +A ++ LD LL+ +A
Sbjct: 506 SPELKAYEEKILTAEEKIQALEQSLYQTLRKMIAKHLPTVKKIAKAIANLDCLLALMHVA 565
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPN 665
Y RP I+ D + ++ RHP +EA + + FIPND L + + +ITGPN
Sbjct: 566 RD--NNYCRPLIDDSDT--LYIQKGRHPVIEASLFDDSFIPNDTHLSQKECQLMLITGPN 621
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST+IRQV + +MAQ+GS+VP A I + D +F+R+GA D RG STFM EM E
Sbjct: 622 MAGKSTYIRQVALIAIMAQIGSYVPAHSARIGIIDKVFSRIGASDDLARGQSTFMVEMTE 681
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV----EEIRAPTLFATHFHEL 781
TA+IL A+ RSL+I+DE+GRGTSTYDG +AWA+ EHL+ E ++ TLFATH+ EL
Sbjct: 682 TANILNNASPRSLVILDEIGRGTSTYDGISIAWAVAEHLLTLRGEGVK--TLFATHYWEL 739
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T LA E G+ N++V+ + TS + L K+ PG D+S+GIHVA A
Sbjct: 740 TELALERK---------GILNFNVA--VKETSDSIVFLRKIIPGCTDKSYGIHVARLAGL 788
Query: 842 PESVVTLAREKAAELEDF-TPSAV 864
P S + A+EK +LE+ TPS V
Sbjct: 789 PHSAIKRAQEKLRQLENKETPSQV 812
>gi|417913342|ref|ZP_12557009.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU109]
gi|341655624|gb|EGS79348.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU109]
Length = 715
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 82 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 140
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 141 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 200
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 201 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 249
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 250 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 299
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 300 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 353
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 354 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 409
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 410 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 468
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 469 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 528
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 529 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 578
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 579 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 619
>gi|375008283|ref|YP_004981916.1| DNA mismatch repair protein mutS [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287132|gb|AEV18816.1| DNA mismatch repair protein mutS [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 902
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 214/631 (33%), Positives = 325/631 (51%), Gaps = 60/631 (9%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +D YM++D + L ++E+ + SL L++ T TA MG RLL WL +PL+D
Sbjct: 246 YQVDHYMKMDRHSKLHLELVETVRSKGRKGSLLWLLDETVTA-MGGRLLKQWLDRPLIDR 304
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
EI RLD V+ RQ+LR L+ + DIERL+ + A + +V+L +S +++
Sbjct: 305 REIERRLDFVETLKTSYFERQELRDRLRGVYDIERLVGRVSYGNANARDLVQLKKSLLQV 364
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P +R + + + ER LDP E L D L+E S+ ++ G +
Sbjct: 365 PALRQTVGALPLAEADKLCER-LDPCEELVD---------LLERSIQEQPPLSVKEGN-L 413
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I YD L ++ + + I L A + + K+LK+ FG+ +TK
Sbjct: 414 IKDGYDKQLDRYRDASRNGKAWIAELE---AKEREATGIKSLKVGYNRVFGYYIEVTKPN 470
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P + + ++ +T + +F +LK+ + E+ + EL + +
Sbjct: 471 LPLVPE---GRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFVAIREQVKQ 527
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ ++LA ++ELDVL SFA ++ Y RP + V ++++G RHP VE
Sbjct: 528 YIPRLQTLAKAIAELDVLQSFATISDEYR--YVRPQFSTERV--LVIQGGRHPVVEKVLG 583
Query: 642 VN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
++PNDC + R + +ITGPNM GKST++RQV + +MAQ+G FVP +RA + + D
Sbjct: 584 AQMYVPNDCYMNREREML-LITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPIFD 642
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F R+GA D G STFM EMLE + AT SLI+ DE+GRGTSTYDG LA AI
Sbjct: 643 QVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQAI 702
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E++ + I A TLF+TH+HELTAL + + ++N H A I+ K+ L+
Sbjct: 703 IEYIHDHIGAKTLFSTHYHELTAL---------ERSLPRLSNVHARA-IEENG-KVVFLH 751
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT----PSAVISDDA------- 869
++ G D+S+GIHVAE A P S++ AR AELE +A DD
Sbjct: 752 QIADGPADKSYGIHVAELAGLPASLIERARAILAELEKAAGKQEAAAGRMDDGALAEAGL 811
Query: 870 ------KIEVGSK--RKRISDPNDMSRGAAR 892
++VGSK R++ S P S GAAR
Sbjct: 812 AFQGNEALDVGSKVEREKASRP---SAGAAR 839
>gi|85859743|ref|YP_461945.1| DNA mismatch repair protein MutS [Syntrophus aciditrophicus SB]
gi|123516864|sp|Q2LUL3.1|MUTS_SYNAS RecName: Full=DNA mismatch repair protein MutS
gi|85722834|gb|ABC77777.1| DNA mismatch repair protein [Syntrophus aciditrophicus SB]
Length = 880
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 245/743 (32%), Positives = 364/743 (48%), Gaps = 70/743 (9%)
Query: 131 ANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGC 190
AN ++ + A+FP IGL ++D++ +++F D F E+ L AL
Sbjct: 125 ANLHAKENNFLAAVFPLEHH----IGLAFLDISTGEFRVSDFQDIRFF---ETELAALDF 177
Query: 191 KECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL 250
+E ++P + K K C L E F + L +R E + DL
Sbjct: 178 REIMVPQGSGKQGFLKAFAGRENSC--RLDEFPDEYFDRESALGRLQDYIRK--EDLEDL 233
Query: 251 VSGFEIAP---GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK 307
G + P GA GA+L Y E ++ YS Y+ LD A R L + ++
Sbjct: 234 --GLKDCPAVIGAAGAVLRYVEETQKSRLTHINRLQWYSAAEYLVLDETAKRNLELFKTI 291
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
D SLF +++ T TA MG R L WL PL+D +I ARL V ++ R++L
Sbjct: 292 QDNRTAGSLFSVLDETVTA-MGGRRLRWWLNYPLVDPEKIKARLAAVAEIRENHLFRENL 350
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
R+ L + D+ERL + A + ++ L QS LP +++ L +S + +R
Sbjct: 351 RKVLSEVYDMERLAGRIALGVANGRDLIALKQSLKNLPVLKNLL----ADSNSFMLDRIQ 406
Query: 428 DPLESLTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
D ++ L D D + K I S + E G +I YD L R I +
Sbjct: 407 DGIDELPDLYDLIEKAIC---DSPPVTLREGG--IIKEGYDEERDRLFFMTRDGRRWIAA 461
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKD 541
L ++ + +LK+ FG+ I+K E +RK +T +
Sbjct: 462 LEEKERKRTGI---SSLKVGFNNVFGYYIEISKANSALAPEDYVRK---------QTLVN 509
Query: 542 GVKFTNTKLKKLGDQYQK-VLEEYKNCQK---ELVNRVIQTAVTFSEIFKSLATMLSELD 597
++ N +LK +Y+ VL C++ +L +V + A ++ AT+L++LD
Sbjct: 510 AERYINQELK----EYEATVLNAETRCREREYDLFMQVRECAAAEITRMQATATLLADLD 565
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKS 656
L S A++A Y P ++ D I ++ RHP VE + F+PND L ++
Sbjct: 566 ALASLAEVAEK--YNYCCPVVDLED--RIEIDVGRHPVVERMSLRDGFVPNDVVLDTDEN 621
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKST+IRQV + +LMAQ+GSFVP RA I V D IF R+GA D +RG
Sbjct: 622 RFLVITGPNMAGKSTYIRQVALIVLMAQMGSFVPSSRARIGVVDRIFTRIGAADSLIRGQ 681
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLF 774
STFM EM E A IL AT RSL+I+DE+GRGTST+DG +AWA+ E+L ++ I A TLF
Sbjct: 682 STFMVEMNEVAQILCHATGRSLVILDEVGRGTSTFDGLSIAWAVAEYLHDKNWIGARTLF 741
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATH+H+LT LA G NY+++ + ++ L K+ PG ++S+GI
Sbjct: 742 ATHYHQLTELAVAG---------TGYRNYNIA--VKEWGDRIIFLRKIVPGGTNRSYGIQ 790
Query: 835 VAEFANFPESVVTLAREKAAELE 857
VA A PE V+ ARE LE
Sbjct: 791 VARIAGVPEEVIVRAREILDNLE 813
>gi|1000877|gb|AAB59569.1| mutation causes premature stop [Homo sapiens]
Length = 428
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/426 (38%), Positives = 258/426 (60%), Gaps = 26/426 (6%)
Query: 11 LKLDAKQARGFLSFYKTLPND-TRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLG 69
L+L++ GF+ F++ +P T VR FDR D+YTAHGE+A A+ + T ++ +G
Sbjct: 9 LQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKTQGVIKYMG 68
Query: 70 -TGSDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSN-------WRLVKSGTPGN 121
G+ L SV +SK FE+ +DLLL R + +E+Y+ N W L +PGN
Sbjct: 69 PAGAKNLQSVVLSKMNFESFVKDLLLVR-QYRVEVYKNRAGNKASKENDWYLAYKASPGN 127
Query: 122 LGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNV 181
L +ED+LF NN+M + +V + + + +G+GYVD +R LGL EF D+ F+N+
Sbjct: 128 LSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNL 187
Query: 182 ESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR 241
E+ L+ +G KEC+LP + + LR + R G+++TERKK +F T+D+ QDL+RL++
Sbjct: 188 EALLIQIGPKECVLPG-GETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLK 246
Query: 242 G--------SVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
G +V P + ++A +L A++ + ELLSD+SN+G + + + YM+L
Sbjct: 247 GKKGEQMNSAVLPEME----NQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYMKL 302
Query: 294 DSAAMRALNVLE-SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLD 352
D AA+RALN+ + S D + SL L+N+ C G+RL++ W+KQPL+D N I RL+
Sbjct: 303 DIAAVRALNLFQGSVEDTTGSQSLAALLNK-CKTPQGQRLVNQWIKQPLMDKNRIEERLN 361
Query: 353 IVQAFVDDTALRQDLRQH-LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
+V+AFV+D LRQ L++ L+R D+ RL +++ A LQ +LYQ +LP + AL
Sbjct: 362 LVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQAL 421
Query: 412 QQYEGQ 417
+++EG+
Sbjct: 422 EKHEGK 427
>gi|448577265|ref|ZP_21642895.1| DNA mismatch repair protein MutS [Haloferax larsenii JCM 13917]
gi|445727910|gb|ELZ79519.1| DNA mismatch repair protein MutS [Haloferax larsenii JCM 13917]
Length = 947
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 208/599 (34%), Positives = 312/599 (52%), Gaps = 45/599 (7%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLF 317
A+GALL+YAE +S Y R D +++LD+ A+R+L + +S++ A+ +LF
Sbjct: 243 AVGALLAYAEYAQGDSKL-EYVTRITRFDPREFLQLDATAIRSLELFDSRS-AHAGSTLF 300
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
+++ T A +G+R L WL++PL+D + I ARLD V DD R DLR+HL + D+
Sbjct: 301 SVLDETACA-LGRRRLEAWLRRPLVDRDAIEARLDAVGELADDALTRADLREHLSAVYDL 359
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + + RA + + L + R+P IR+ L S+ R D +SL D
Sbjct: 360 ERLVARVSRERANARDLRSLQTTLDRVPEIRATLD-------SVDSGRLADLRDSL---D 409
Query: 438 HLNKFIALVETSV--DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L L++ ++ D Q +I+S +D L L+ + L Q
Sbjct: 410 DLGDVRDLIDRAIVDDPPQEITEGGVIASGFDDELDDLRGTATEGREWVSDLEAQERERT 469
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ LD G H + I + P + K+ ++ +T K+ +F +LK+ D
Sbjct: 470 GID-----SLDVGYNQVHGYYI-EVTNPNL-DKVPDDYVRRQTLKNSERFYTPELKERED 522
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
+ E + + +L V SE +++A L++LDVL + AD+A YTR
Sbjct: 523 EILSATERAETLEYDLFCEVRAEVAAESERIQAVADALADLDVLRTLADVA--VANDYTR 580
Query: 616 PDINPPDV---GDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKST 671
P+ G I +E RHP VE QD F+PN L +G ++TGPNM GKST
Sbjct: 581 PEFREEGSEGHGGIEIEAGRHPVVERTQD--EFVPNPTSLPQG--GVALVTGPNMSGKST 636
Query: 672 FIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 731
++RQV + ++AQ+GSFVP A + V D +F RVGA D G STFM+EM E IL
Sbjct: 637 YMRQVALVCILAQLGSFVPARAARLPVVDRVFTRVGASDDIAGGQSTFMREMSELTEILH 696
Query: 732 GATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANE 791
AT+ SL+++DE+GRGTST DG +A A E + +E+ A TLFATH+H+LT A E +
Sbjct: 697 NATEDSLVLLDEVGRGTSTADGLAIARATTEFIHDEVGAMTLFATHYHDLTDAASERS-- 754
Query: 792 FNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
GV N H +A T ++T L+ V G S+G+ VA+ A P +VV AR
Sbjct: 755 -------GVFNLHFTAT--QTDGEVTFLHSVAEGPSSSSYGVEVAQLAGVPPTVVDRAR 804
>gi|418411715|ref|ZP_12984981.1| DNA mismatch repair protein mutS [Staphylococcus epidermidis
BVS058A4]
gi|420167653|ref|ZP_14674305.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM087]
gi|394237681|gb|EJD83167.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM087]
gi|410891298|gb|EKS39095.1| DNA mismatch repair protein mutS [Staphylococcus epidermidis
BVS058A4]
Length = 873
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|56419841|ref|YP_147159.1| DNA mismatch repair protein MutS [Geobacillus kaustophilus HTA426]
gi|81675852|sp|Q5L0E5.1|MUTS_GEOKA RecName: Full=DNA mismatch repair protein MutS
gi|56379683|dbj|BAD75591.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426]
Length = 896
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 214/631 (33%), Positives = 325/631 (51%), Gaps = 60/631 (9%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +D YM++D + L ++E+ + SL L++ T TA MG RLL WL +PL+D
Sbjct: 240 YQVDHYMKMDRHSKLHLELVETVRSKGRKGSLLWLLDETVTA-MGGRLLKQWLDRPLIDR 298
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
EI RLD V+ RQ+LR L+ + DIERL+ + A + +V+L +S +++
Sbjct: 299 REIERRLDFVETLKTSYFERQELRDRLRGVYDIERLVGRVSYGNANARDLVQLKKSLLQV 358
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P +R + + + ER LDP E L D L+E S+ ++ G +
Sbjct: 359 PALRQTVGALPLAEADKLCER-LDPCEELVD---------LLERSIQEQPPLSVKEGN-L 407
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I YD L ++ + + I L A + + K+LK+ FG+ +TK
Sbjct: 408 IKDGYDKQLDRYRDASRNGKAWIAELE---AKEREATGIKSLKVGYNRVFGYYIEVTKPN 464
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P + + ++ +T + +F +LK+ + E+ + EL + +
Sbjct: 465 LPLVPE---GRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFVAIREQVKQ 521
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ ++LA ++ELDVL SFA ++ Y RP + V ++++G RHP VE
Sbjct: 522 YIPRLQTLAKAIAELDVLQSFATISDEYR--YVRPQFSTERV--LVIQGGRHPVVEKVLG 577
Query: 642 VN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
++PNDC + R + +ITGPNM GKST++RQV + +MAQ+G FVP +RA + + D
Sbjct: 578 AQMYVPNDCYMNREREML-LITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPIFD 636
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F R+GA D G STFM EMLE + AT SLI+ DE+GRGTSTYDG LA AI
Sbjct: 637 QVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQAI 696
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E++ + I A TLF+TH+HELTAL + + ++N H A I+ K+ L+
Sbjct: 697 IEYIHDHIGAKTLFSTHYHELTAL---------ERSLPRLSNVHARA-IEENG-KVVFLH 745
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT----PSAVISDDA------- 869
++ G D+S+GIHVAE A P S++ AR AELE +A DD
Sbjct: 746 QIADGPADKSYGIHVAELAGLPASLIERARAILAELEKAAGKQEAAAGRMDDGALAEAGL 805
Query: 870 ------KIEVGSK--RKRISDPNDMSRGAAR 892
++VGSK R++ S P S GAAR
Sbjct: 806 AFQGNEALDVGSKVEREKASRP---SAGAAR 833
>gi|261419511|ref|YP_003253193.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC61]
gi|319766326|ref|YP_004131827.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC52]
gi|448237462|ref|YP_007401520.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
gi|261375968|gb|ACX78711.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC61]
gi|317111192|gb|ADU93684.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC52]
gi|445206304|gb|AGE21769.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
Length = 903
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 214/631 (33%), Positives = 325/631 (51%), Gaps = 60/631 (9%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +D YM++D + L ++E+ + SL L++ T TA MG RLL WL +PL+D
Sbjct: 247 YQVDHYMKMDRHSKLHLELVETVRSKGRKGSLLWLLDETVTA-MGGRLLKQWLDRPLIDR 305
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
EI RLD V+ RQ+LR L+ + DIERL+ + A + +V+L +S +++
Sbjct: 306 REIERRLDFVETLKTSYFERQELRDRLRGVYDIERLVGRVSYGNANARDLVQLKKSLLQV 365
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P +R + + + ER LDP E L D L+E S+ ++ G +
Sbjct: 366 PALRQTVGALPLAEADKLCER-LDPCEELVD---------LLERSIQEQPPLSVKEGN-L 414
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I YD L ++ + + I L A + + K+LK+ FG+ +TK
Sbjct: 415 IKDGYDKQLDRYRDASRNGKAWIAELE---AKEREATGIKSLKVGYNRVFGYYIEVTKPN 471
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P + + ++ +T + +F +LK+ + E+ + EL + +
Sbjct: 472 LPLVPE---GRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFVAIREQVKQ 528
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ ++LA ++ELDVL SFA ++ Y RP + V ++++G RHP VE
Sbjct: 529 YIPRLQTLAKAIAELDVLQSFATISDEYR--YVRPQFSTERV--LVIQGGRHPVVEKVLG 584
Query: 642 VN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
++PNDC + R + +ITGPNM GKST++RQV + +MAQ+G FVP +RA + + D
Sbjct: 585 AQMYVPNDCYMNREREML-LITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPIFD 643
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F R+GA D G STFM EMLE + AT SLI+ DE+GRGTSTYDG LA AI
Sbjct: 644 QVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQAI 703
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E++ + I A TLF+TH+HELTAL + + ++N H A I+ K+ L+
Sbjct: 704 IEYIHDHIGAKTLFSTHYHELTAL---------ERSLPRLSNVHARA-IEENG-KVVFLH 752
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT----PSAVISDDA------- 869
++ G D+S+GIHVAE A P S++ AR AELE +A DD
Sbjct: 753 QIADGPADKSYGIHVAELAGLPASLIERARAILAELEKAAGKQEAAAGRMDDGALAEAGL 812
Query: 870 ------KIEVGSK--RKRISDPNDMSRGAAR 892
++VGSK R++ S P S GAAR
Sbjct: 813 AFQGNEALDVGSKVEREKASRP---SAGAAR 840
>gi|420212650|ref|ZP_14717998.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM001]
gi|394279611|gb|EJE23917.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM001]
Length = 873
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|418664779|ref|ZP_13226245.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU081]
gi|374410225|gb|EHQ80986.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU081]
Length = 877
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 244 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 302
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 303 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 362
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 363 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 411
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 412 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 461
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 462 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 515
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 516 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 571
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 572 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 630
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 631 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 690
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 691 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 740
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 741 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 781
>gi|336426864|ref|ZP_08606872.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010504|gb|EGN40487.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 882
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 217/679 (31%), Positives = 340/679 (50%), Gaps = 48/679 (7%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALLSY +I Y + YM LDS+ R L + E+ + K SL +
Sbjct: 236 AAGALLSYLYDTQKIPLSHFTHIEPYLTNRYMLLDSSTRRNLELTETLREKQKRGSLLWV 295
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L +L+QPL+ E+ RLD V+AF ++ R +LR++L I D+ER
Sbjct: 296 LDKTKTA-MGARMLRSFLEQPLIHKTEMEERLDAVEAFCNNPLARDELREYLNPIYDLER 354
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + + A + ++ S LP+I++ L++ G+ + I+E +D LE L
Sbjct: 355 LLGKVSYKTANPRDLIAFRNSMEMLPHIKTVLKELPGEANQKIEEE-IDGLEDL------ 407
Query: 440 NKFIALVETSVD----LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
AL+ S++ + E G MI Y+ + L+ + + + L
Sbjct: 408 ---FALIGESIEEEPPITIREGG--MIREGYNEDIDTLRRAKTEGKNWLADLENTERERT 462
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K L++ FG+ +TK + ++ +T + ++T +LK+L D
Sbjct: 463 GI---KNLRVKYNKVFGYYLEVTKS----YLNMVPEDYVRKQTLTNAERYTTPRLKELED 515
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
++ + +L + E ++ A ++ LDV SF+ +A YTR
Sbjct: 516 TILNAEDKLCTLEYDLFCEIRDQIAGEIERIQTTAKAVARLDVFCSFSLVAEQ--NQYTR 573
Query: 616 PDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
P +N + G I ++ RHP VE + FIPND L +ITGPNM GKST++R
Sbjct: 574 PKLN--EKGLIHIKDGRHPVVEKMIEHDMFIPNDTHLDNNTRQIAVITGPNMAGKSTYMR 631
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q + +LMAQ+GSFVP +A I + D IF RVGA D G STFM EM E A+IL+ AT
Sbjct: 632 QTALIVLMAQIGSFVPARQADIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNAT 691
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEF 792
SL+I+DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT L
Sbjct: 692 RNSLLILDEIGRGTSTFDGLSIAWAVIEHISNRKLLGAKTLFATHYHELTELE------- 744
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+M V NY ++ + + L K+ G D+S+GI VA A P+ V+ A+E
Sbjct: 745 --GKMSNVNNYCIA--VKEKGDDIVFLRKIIKGGADKSYGIQVARLAGVPDLVIDRAKEI 800
Query: 853 AAEL--EDFTPSAVISDDAKIEVGSKRKRISDPNDMSR----GAARAHQFLKEFSDMPLE 906
+L D T A+ SK++ D D+ + L+E ++ +
Sbjct: 801 VEQLSDNDITEKVQSISIAENNAPSKKQEHYDELDLDQISLFDTVTDADVLEELKNVEVS 860
Query: 907 TMDLKEALERVKRMKDDLE 925
TM +AL + R+++ L+
Sbjct: 861 TMTPLDALNTLYRLQNKLK 879
>gi|417659017|ref|ZP_12308630.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU045]
gi|417910863|ref|ZP_12554579.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU105]
gi|418605405|ref|ZP_13168730.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU041]
gi|418624358|ref|ZP_13187033.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU125]
gi|419770876|ref|ZP_14296938.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-K]
gi|420182965|ref|ZP_14689098.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM049]
gi|420187499|ref|ZP_14693519.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM039]
gi|420197185|ref|ZP_14702909.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM020]
gi|420206384|ref|ZP_14711894.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM008]
gi|420209426|ref|ZP_14714863.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM003]
gi|420214224|ref|ZP_14719503.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05005]
gi|420216056|ref|ZP_14721278.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05001]
gi|420218838|ref|ZP_14723888.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH04008]
gi|420221913|ref|ZP_14726838.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH08001]
gi|420224775|ref|ZP_14729613.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH06004]
gi|420227086|ref|ZP_14731859.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05003]
gi|420229409|ref|ZP_14734115.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH04003]
gi|420231767|ref|ZP_14736412.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH051668]
gi|329736656|gb|EGG72922.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU045]
gi|341655051|gb|EGS78787.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU105]
gi|374402502|gb|EHQ73527.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU041]
gi|374827587|gb|EHR91448.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU125]
gi|383362425|gb|EID39777.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-K]
gi|394249428|gb|EJD94641.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM049]
gi|394255941|gb|EJE00877.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM039]
gi|394265992|gb|EJE10638.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM020]
gi|394278223|gb|EJE22540.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM008]
gi|394278873|gb|EJE23185.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM003]
gi|394283589|gb|EJE27754.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05005]
gi|394289944|gb|EJE33814.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH08001]
gi|394291583|gb|EJE35381.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH04008]
gi|394292506|gb|EJE36248.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05001]
gi|394294178|gb|EJE37864.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH06004]
gi|394297587|gb|EJE41184.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH05003]
gi|394299175|gb|EJE42726.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH04003]
gi|394302309|gb|EJE45757.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH051668]
Length = 873
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|27467892|ref|NP_764529.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis ATCC
12228]
gi|57866808|ref|YP_188445.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis RP62A]
gi|282876272|ref|ZP_06285139.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis SK135]
gi|418607717|ref|ZP_13170940.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU057]
gi|418609872|ref|ZP_13173006.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU065]
gi|418612180|ref|ZP_13175226.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU117]
gi|418626780|ref|ZP_13189376.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU126]
gi|420165170|ref|ZP_14671874.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM088]
gi|420172705|ref|ZP_14679203.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM067]
gi|420193967|ref|ZP_14699796.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM021]
gi|420234455|ref|ZP_14739018.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH051475]
gi|421607202|ref|ZP_16048448.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
AU12-03]
gi|38258089|sp|Q8CPF0.1|MUTS_STAES RecName: Full=DNA mismatch repair protein MutS
gi|71151981|sp|Q5HPP5.1|MUTS_STAEQ RecName: Full=DNA mismatch repair protein MutS
gi|27315437|gb|AAO04571.1|AE016747_68 DNA mismatch repair protein [Staphylococcus epidermidis ATCC 12228]
gi|57637466|gb|AAW54254.1| DNA mismatch repair protein HexA [Staphylococcus epidermidis RP62A]
gi|281295297|gb|EFA87824.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis SK135]
gi|374403834|gb|EHQ74829.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU057]
gi|374406208|gb|EHQ77111.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU065]
gi|374820062|gb|EHR84176.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU117]
gi|374831324|gb|EHR95066.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU126]
gi|394236337|gb|EJD81871.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM088]
gi|394241382|gb|EJD86796.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM067]
gi|394266665|gb|EJE11290.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM021]
gi|394304258|gb|EJE47665.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIH051475]
gi|406656994|gb|EKC83387.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
AU12-03]
Length = 873
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|297530518|ref|YP_003671793.1| DNA mismatch repair protein MutS [Geobacillus sp. C56-T3]
gi|297253770|gb|ADI27216.1| DNA mismatch repair protein MutS [Geobacillus sp. C56-T3]
Length = 903
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 305/577 (52%), Gaps = 38/577 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +D YM++D + L ++E+ + SL L++ T TA MG RLL WL +PL+D
Sbjct: 247 YQVDHYMKMDRHSKLHLELVETVRSKGRKGSLLWLLDETVTA-MGGRLLKQWLDRPLIDR 305
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
EI RLD V+ RQ+LR L+ + DIERL+ + A + +V+L +S +++
Sbjct: 306 REIERRLDFVETLKTSYFERQELRDRLRGVYDIERLVGRVSYGNANARDLVQLKKSLLQV 365
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P +R + + + ER LDP E L D L+E S+ ++ G +
Sbjct: 366 PALRQTVGALPVAEADKLCER-LDPCEELVD---------LLERSIQEQPPLSVKEGN-L 414
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I YD L ++ + + I L A + + K+LK+ FG+ +TK
Sbjct: 415 IKDGYDKQLDRYRDASRNGKAWIAELE---AKEREATGIKSLKVGYNRVFGYYIEVTKPN 471
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P + + ++ +T + +F +LK+ + E+ + EL + +
Sbjct: 472 LPLVPE---GRYERKQTLANAERFITPELKEKEALILEAEEKSIELEYELFVAIREQVKQ 528
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ ++LA ++ELDVL SFA ++ Y RP + V ++++G RHP VE
Sbjct: 529 YIPRLQTLAKAIAELDVLQSFATISDEYR--YVRPQFSTERV--LVIQGGRHPVVEKVLG 584
Query: 642 VN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
++PNDC + R + +ITGPNM GKST++RQV + +MAQ+G FVP +RA + + D
Sbjct: 585 AQMYVPNDCYMNREREML-LITGPNMAGKSTYMRQVALTAVMAQIGCFVPAERAVLPIFD 643
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F R+GA D G STFM EMLE + AT SLI+ DE+GRGTSTYDG LA AI
Sbjct: 644 QVFTRIGAADDLSAGQSTFMVEMLEARHAIAHATQNSLILFDEIGRGTSTYDGMALAQAI 703
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E++ + I A TLF+TH+HELTAL + + ++N H A I+ K+ L+
Sbjct: 704 IEYIHDHIGAKTLFSTHYHELTAL---------ERSLPRLSNVHARA-IEENG-KVVFLH 752
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ G D+S+GIHVAE A P S++ AR AELE
Sbjct: 753 QIADGPADKSYGIHVAELAGLPASLIERARAILAELE 789
>gi|293366740|ref|ZP_06613416.1| DNA mismatch repair protein HexA [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319041|gb|EFE59411.1| DNA mismatch repair protein HexA [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 877
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 244 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 302
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 303 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 362
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 363 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 411
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 412 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 461
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 462 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 515
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 516 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 571
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 572 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 630
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 631 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 690
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 691 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 740
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 741 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 781
>gi|325295187|ref|YP_004281701.1| DNA mismatch repair protein mutS [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065635|gb|ADY73642.1| DNA mismatch repair protein mutS [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 842
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 203/647 (31%), Positives = 335/647 (51%), Gaps = 58/647 (8%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
++Y+ + Y+ LD + L ++E ++ SLFG++N+T T GMG+RLL W+ PL
Sbjct: 239 KRYTGEKYIYLDPQTQKNLELIEPIAGKLESASLFGVLNKTKT-GMGRRLLKFWILHPLK 297
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
D EI RLD V+ D + ++ + L ++ DIERL+ + A + + S
Sbjct: 298 DKKEIEERLDAVEELKDSFFVADEILELLSKVYDIERLLSKITSGIASPRDLASFRNSLG 357
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVE----TSVDLDQLENG 458
LP ++ L ++ S I + + D + + + + LVE TS + ++ G
Sbjct: 358 VLPDLKKLLADFKSSLLSQIYKNFDDLYDIYCELERV-----LVENPPFTSREGGLIKEG 412
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
++ D L +KNE E + ++I ++ +LK+ FG+ ++
Sbjct: 413 ---VNPELDE-LRRIKNEGEKILKEIEERERKRTGI------SSLKIGFNNVFGYYIEVS 462
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K + +I +T + +F +LK+ ++ E + + +L + +
Sbjct: 463 KAN----LHLVPENYIRRQTLVNAERFITPELKEFEEKILSAQERIEKIEYQLFVELRKF 518
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
++ A ++ +DVLLSF+ +A+ YT+P + + I ++ +HP +E
Sbjct: 519 VSKNADRISKTAEKIATIDVLLSFSKIANE--RGYTKPRVT--EGYSIKIKNGKHPVLEK 574
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
+FIPND +L K + I+TGPNMGGKS F+RQ + +MAQ+GSFVP + A I +
Sbjct: 575 FLEEDFIPNDTELTE-KEFILIVTGPNMGGKSVFLRQTALITIMAQIGSFVPAEEAEIGI 633
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF+RVGA D +G+STFM EM+ETA+IL+ A RSLII+DE+GRGTSTYDG +A
Sbjct: 634 VDRIFSRVGAADNLSKGLSTFMMEMVETANILQNAGKRSLIILDEIGRGTSTYDGMSIAK 693
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
A+ E++ ++ A TLFATH+HELT L ++ GV N+HV+ ++ K+
Sbjct: 694 AVVEYISGKVGAKTLFATHYHELTELEG---------KVKGVKNFHVT--VEEIDEKIVF 742
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKR- 877
+KV PGA ++S+GIHVAE A P+ V+ A+E +LE G K
Sbjct: 743 THKVLPGASEKSYGIHVAELAGLPKEVIDRAKEILYQLER---------------GGKEL 787
Query: 878 --KRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKD 922
R+++ + S + +KE + + T EAL + R+K+
Sbjct: 788 PLLRLAEEKETSWSIGLEEKLIKELEAIEISTTTPLEALMILSRLKE 834
>gi|386001033|ref|YP_005919332.1| DNA mismatch repair protein MutS [Methanosaeta harundinacea 6Ac]
gi|357209089|gb|AET63709.1| DNA mismatch repair protein MutS [Methanosaeta harundinacea 6Ac]
Length = 893
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 306/599 (51%), Gaps = 31/599 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA+L+Y + + +R YS + +M LD +R L + + D +K +L
Sbjct: 232 ACGAVLTYLQSARLPALDHIAEVRLYSPEDFMVLDETTLRNLEIFRNIRDRSKRGTLVDF 291
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++ T T G G R L WL+ PLL +I RLD V+ V D LR DLR+ L+ D+ER
Sbjct: 292 LDETTTPG-GSRTLRKWLQMPLLSHEDIERRLDAVEELVGDPLLRADLREALRGGGDLER 350
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY-LDPLESLTDDDH 438
++ A + + L S LP I + L + ++ER + PL + D
Sbjct: 351 VVGRTSCGTASPKDLRALKGSIEGLPRIVAILTAARSEELVRLRERLEIGPLGEVAD--L 408
Query: 439 LNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
+ + IA S E G +I YD L L++ I + +Q + D
Sbjct: 409 IGRAIADDPPSA---IREGG--IIRDGYDPELDGLRSLLREGRGWIARMERQ---ERDRT 460
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
K+L++ FG+ +TK + ++I +T G +F +LK++ +
Sbjct: 461 GIKSLRVGYNNVFGYYIEVTKANLSAV----PPEYIRKQTLAGGERFITPELKEMESRVL 516
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
E + ++E+ V + A S L ELDVL++ A +A+ + RP +
Sbjct: 517 SAQERSASLEEEIFISVRREAAAKSREILERGEALGELDVLVTLAAVAADGE--FVRPQL 574
Query: 619 NPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
N D G+I + SRHP +E F+ ND L + I+TGPNM GKST++RQ+ +
Sbjct: 575 N--DRGEISMRASRHPILERAMRGGFVANDVDLDGRSNRVIILTGPNMAGKSTYMRQIAL 632
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
I++AQ+GSFVP ASIS D IF RVGA D G STFM EM E A IL AT +SL
Sbjct: 633 AIILAQIGSFVPAAFASISPVDRIFTRVGAYDDLSAGQSTFMIEMTELAKILSSATSKSL 692
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMV 798
I++DE+GRGTST+DG +AW++ EH+ +R +FATH+H+LT LA +
Sbjct: 693 ILLDEIGRGTSTFDGLAIAWSVTEHIHNRVRGKAVFATHYHQLTQLA---------GVLP 743
Query: 799 GVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
GV NY+++ + + L V PGA D+S+GIHVA+ A PE+VV A+E E+E
Sbjct: 744 GVKNYNMA--VKEEGETVLFLRTVVPGATDRSYGIHVAKLAGVPEAVVARAKEILREIE 800
>gi|418325588|ref|ZP_12936794.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU071]
gi|420185398|ref|ZP_14691490.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM040]
gi|365228190|gb|EHM69375.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU071]
gi|394254384|gb|EJD99353.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM040]
Length = 873
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQRYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|187779607|ref|ZP_02996080.1| hypothetical protein CLOSPO_03203 [Clostridium sporogenes ATCC
15579]
gi|187773232|gb|EDU37034.1| DNA mismatch repair protein MutS [Clostridium sporogenes ATCC
15579]
Length = 931
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 199/641 (31%), Positives = 343/641 (53%), Gaps = 43/641 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ L+ I DIER++ + + ++++ L S
Sbjct: 311 INKNPIEDRLNAVEELLNNISLQEDLKEDLRSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGE-Y 460
++PYI+ L ++ L E+ +D LE + + L ++ +D L E
Sbjct: 371 GKIPYIKEYLANFKSDLF-LNMEQNIDTLEDIHE--------LLDKSLLDSPSLSVKEGN 421
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ ITK
Sbjct: 422 IIKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEITKA 478
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ + ++I +T + ++ +LK++ ++ E+ + + +L ++
Sbjct: 479 NLSSVPE---GRYIRKQTLANAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRDFIE 535
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQ 639
+ + A ++S++D L S A +A Y +P+IN D +I++E RHP VE
Sbjct: 536 ENIDRMQKTARIISDIDCLCSLATVA--LENNYIKPNINAKD--EILIEEGRHPVVEKVI 591
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP +A+IS+
Sbjct: 592 PKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANISIC 651
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +AW+
Sbjct: 652 DKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWS 711
Query: 760 ICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
+ E++ + +R TLFATH+HELT L + GV NY VS + ++
Sbjct: 712 VIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS--VSELENEIV 760
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSK- 876
L K+ G DQS+GI VA+ A P V+ A+E +E T ++ E +K
Sbjct: 761 FLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDTEENSLNITTSREYKNKD 820
Query: 877 -----RKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKE 912
R+ +S N++ G+ H L E + +E + K+
Sbjct: 821 YIEASRETLSTKNNL--GSGIQHDTLSETNTTIIEDENTKD 859
>gi|390934967|ref|YP_006392472.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570468|gb|AFK86873.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 857
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 316/587 (53%), Gaps = 57/587 (9%)
Query: 285 YSLDSYMRLDSAAMRALNVLES-KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
Y +S+M LD+ +R L ++ S D +K+ +L ++++T T MG RLL WL++PL+D
Sbjct: 258 YEDNSFMLLDNNTIRNLEIIYSINRDHSKSGTLLSVLDQTVTP-MGGRLLKRWLEEPLID 316
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
V +IN RLD V +D R D+R LK I D+ERL L + + ++ + S R
Sbjct: 317 VEKINYRLDSVSELYNDYKGRSDIRDILKGIYDLERLSSKLVYQNINAKDLLSIKISIER 376
Query: 404 LPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDHLNKFIALVETSVDLDQLENGE-- 459
LP ++ L +Y + +KE + LD L+ + D L++ S+ D N +
Sbjct: 377 LPKLKQLLNKYNSNY---LKEIFTKLDTLQDIHD---------LIDKSIKDDPSSNVKEG 424
Query: 460 YMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITK 519
+I +D + L+ + I +L + K LK+ FG+ ++K
Sbjct: 425 NIIKDGFDKNIDELRRASIDGKSWIANLEAYEKEKTGI---KTLKIGYNKVFGYYIEVSK 481
Query: 520 KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYK---NCQKEL 571
+ + +I +T + ++ +LK LG + + V EY+ + ++++
Sbjct: 482 SYISSVPE----NYIRKQTLANAERYITPELKDIEEKILGAETKLVELEYEIFDSIREQI 537
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGS 631
N + + +T I + LDVL+S A +A + Y +P +N D I+++
Sbjct: 538 KNEIYRIQMTSRHI--------AILDVLVSLATVAET--NNYVKPVVNGSD--RIVIKDG 585
Query: 632 RHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
RHP +E +FI ND + I GK IITGPNM GKST++RQV + +LMAQ+GSFVP
Sbjct: 586 RHPVIETIMDDSFISNDIE-IDGKKPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPA 644
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
A I V D IF RVGA D G STFM EM E + IL AT SLII+DE+GRGTSTY
Sbjct: 645 SYAEIGVVDRIFTRVGASDDLFSGQSTFMVEMNEVSLILNSATKNSLIILDEVGRGTSTY 704
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG +A AI E++ ++I+A T+FATH+HELT L ++ G+ NY++S ++
Sbjct: 705 DGMSIACAILEYIHDKIKAKTMFATHYHELTNLED---------KLDGIKNYNIS--VEE 753
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
T ++ L K+ PGA D+S+GI VA+ A P+ VV A++ LE+
Sbjct: 754 TDDEIIFLRKIIPGAADKSYGIQVAKLAGLPDEVVQNAKKILNNLEN 800
>gi|251810727|ref|ZP_04825200.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
BCM-HMP0060]
gi|251805887|gb|EES58544.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
BCM-HMP0060]
Length = 877
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 244 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 302
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 303 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 362
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 363 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 411
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 412 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 461
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 462 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 515
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 516 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 571
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 572 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 630
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 631 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 690
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 691 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 740
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 741 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 781
>gi|312111577|ref|YP_003989893.1| DNA mismatch repair protein MutS [Geobacillus sp. Y4.1MC1]
gi|311216678|gb|ADP75282.1| DNA mismatch repair protein MutS [Geobacillus sp. Y4.1MC1]
Length = 864
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 233/762 (30%), Positives = 371/762 (48%), Gaps = 105/762 (13%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLT---KRVLGL 169
+V+ TPG + +L N T V LF + T G Y DL+ R+ L
Sbjct: 104 VVQLITPGTVMEGRGLLEKENNYLAT---VTLFAD-----GTYGFAYTDLSTGENRITIL 155
Query: 170 AEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKT 229
A F D V + L A+G KE +L ++ S E + L++ R GV ++ TE
Sbjct: 156 ASFED------VMNELYAIGTKEIVLASD-FPSDEQQLLKE---RYGVTISYEDGTE--- 202
Query: 230 RDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGA---LLSYAELLSDESNYGNYYIRK-- 284
+ GF G L +++A LL +Y IR
Sbjct: 203 --------------------MPEGFATIAGGLAQDKLQITFARLL-------HYIIRTQK 235
Query: 285 -----------YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
Y +D YM++D + R L + E+ + SL L++ T TA MG RLL
Sbjct: 236 RRLDHMQPVQVYQVDHYMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTA-MGGRLL 294
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
WL +PLLD +I RL +V+ + RQ+LR+ L+ + D+ERL + +
Sbjct: 295 KQWLDRPLLDRGQIERRLHMVETLIHHYFERQELRERLREVYDVERLAGRVAYGNVNARD 354
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
+++L +S ++P ++ + + + + ++ LDP L D L+E S+ +
Sbjct: 355 LIQLKKSLQQIPALKDIVAKLADSQAQQLADK-LDPCSELVD---------LLERSIQEN 404
Query: 454 ---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQ 510
++ G +I Y+ L ++ + + I L + + +L K+LK+
Sbjct: 405 PPLSVKEGN-IIKDGYNETLDRFRDASRNGKSWIAQLE---SKERELTGIKSLKIGYNRV 460
Query: 511 FGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKE 570
FG+ +TK P + ++ +T + +F +LK+ + E+ + E
Sbjct: 461 FGYYIEVTK---PNLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYE 517
Query: 571 LVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEG 630
L + + + +SLA +SELDVL SFA ++ Y +P + + ++I++
Sbjct: 518 LFVDIRERVKQYIPRLQSLAKAISELDVLQSFATVSEE--RHYVKPQFS--EHRELIIQA 573
Query: 631 SRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
RHP VE ++PNDC + + + +ITGPNM GKST++RQ+ + +MAQ+G FV
Sbjct: 574 GRHPVVEKVLGTQTYVPNDCYMNKERELL-LITGPNMSGKSTYMRQIALTAIMAQIGCFV 632
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
P D+A + + D +F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTS
Sbjct: 633 PADKAVLPIFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTS 692
Query: 750 TYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI 809
TYDG LA AI E++ + I A TLF+TH+HELT L + + + N HVSA
Sbjct: 693 TYDGMALAQAIIEYIHDHIGAKTLFSTHYHELTDL---------EQSLPKLKNVHVSAVE 743
Query: 810 DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
++ K+ L+K+E G DQS+GIHVAE A P S++ A E
Sbjct: 744 ENG--KVVFLHKIEEGPADQSYGIHVAELAGLPSSLIRRAEE 783
>gi|253577912|ref|ZP_04855184.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850230|gb|EES78188.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 874
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 211/641 (32%), Positives = 330/641 (51%), Gaps = 37/641 (5%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
V ++ A GAL Y + + IR Y+ + YM +DS++ R L ++E+ +
Sbjct: 224 VGDYDCGIIAAGALFLYLKETQKTALSHMTTIRPYAAEKYMLIDSSSRRNLELVETLREK 283
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
K SL ++++T TA MG R L +++QPL+D +EI RL+ ++ + LR ++R++
Sbjct: 284 QKRGSLLWVLDKTKTA-MGARTLRSYVEQPLIDRDEIEQRLEALEELNKNGMLRDEIREY 342
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L + D+ERL+ + + A + ++ S LPYI+ L++++ I E +D L
Sbjct: 343 LGPVYDLERLISRISYKSANPRDLIAFASSLEMLPYIKQVLKEFKTPLLQKIYED-MDSL 401
Query: 431 ESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
E +TD L K A+VE L Q + G +I Y+ + + + ++ + L +
Sbjct: 402 EDVTD---LIKR-AIVEDP-PLAQKDGG--IIKEGYNEDVDKFRRSRTDGKKWLSELEAK 454
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+ K +K+ FG+ IT + + +I +T + ++ +L
Sbjct: 455 ERERTGI---KTMKIKYNRVFGYSLEITNT----FKDLVPDNYIRKQTLTNAERYITQEL 507
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
K+L D ++ + EL V + A ++ LDV S A +A
Sbjct: 508 KELEDLILGAEDKLYALEYELFCDVRDAVGKEVMRIQKTAKAVAALDVFASLALVAER-- 565
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGK 669
+ RP N V DI + RHP VE + FI ND L K IITGPNM GK
Sbjct: 566 NHFVRPKTNTTGVIDI--KNGRHPVVEQMIENDMFIANDTYLDNHKKRVSIITGPNMAGK 623
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST++RQ + +LMAQ+GSFVP ++A+I + D IF RVGA D G STFM EM E A+I
Sbjct: 624 STYMRQTALIVLMAQIGSFVPAEKANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANI 683
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHE 787
L+ AT RSL+I+DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT L
Sbjct: 684 LRNATARSLLILDEIGRGTSTFDGLAIAWAVIEHISNTKLCGAKTLFATHYHELTELEG- 742
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
++ GV NY ++ + + L K+ G D+S+GI VA+ A P+SV+
Sbjct: 743 --------KIPGVNNYCIA--VKEKGDDIVFLRKIVQGGADKSYGIQVAKLAGVPDSVIQ 792
Query: 848 LAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSR 888
A+E EL D +A + D + K+K + D DM++
Sbjct: 793 RAKELVEELSDADITAAVKD---LTSAKKKKPVYDQMDMAQ 830
>gi|336235959|ref|YP_004588575.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362814|gb|AEH48494.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidasius
C56-YS93]
Length = 864
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 232/762 (30%), Positives = 371/762 (48%), Gaps = 105/762 (13%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLT---KRVLGL 169
+V+ TPG + +L N T V LF + T G Y DL+ R+ L
Sbjct: 104 VVQLITPGTVMEGRGLLEKENNYLAT---VTLFAD-----GTYGFAYTDLSTGENRITIL 155
Query: 170 AEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKT 229
A F D V + L A+G KE +L ++ S E + L++ R GV ++ TE
Sbjct: 156 ASFED------VMNELYAIGTKEIVLASD-FPSDEQQLLKE---RYGVTISYEDGTE--- 202
Query: 230 RDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGA---LLSYAELLSDESNYGNYYIRK-- 284
+ GF G L +++A LL +Y IR
Sbjct: 203 --------------------MPEGFATIAGGLAQNKLQITFARLL-------HYIIRTQK 235
Query: 285 -----------YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
Y +D YM++D + R L + E+ + SL L++ T TA MG RLL
Sbjct: 236 RRLDHMQPVQVYQVDHYMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTA-MGGRLL 294
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
WL +PLLD +I RL +V+ + RQ+LR+ L+ + D+ERL + +
Sbjct: 295 KQWLDRPLLDRGQIERRLHMVETLIHHYFERQELRERLREVYDVERLAGRVAYGNVNARD 354
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
+++L +S ++P ++ + + + + ++ LDP L D L+E S+ +
Sbjct: 355 LIQLKKSLQQIPALKDIVAKLADNQAQQLADK-LDPCSELVD---------LLERSIQEN 404
Query: 454 ---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQ 510
++ G +I Y+ L ++ + + I L + + +L K+LK+
Sbjct: 405 PPLSVKEGN-IIKDGYNETLDRFRDASRNGKSWIAQLE---SKERELTGIKSLKIGYNRV 460
Query: 511 FGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKE 570
FG+ +TK P + ++ +T + +F +LK+ + E+ + E
Sbjct: 461 FGYYIEVTK---PNLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYE 517
Query: 571 LVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEG 630
L + + + +SLA +SELDVL SFA ++ Y +P + + +++++
Sbjct: 518 LFVDIRERVKQYIPRLQSLAKAISELDVLQSFATVSEE--RHYVKPQFS--EHRELVIQA 573
Query: 631 SRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
RHP VE ++PNDC + + + +ITGPNM GKST++RQ+ + +MAQ+G FV
Sbjct: 574 GRHPVVEKVLGTQTYVPNDCYMNKERELL-LITGPNMSGKSTYMRQIALTAIMAQIGCFV 632
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
P D+A + + D +F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTS
Sbjct: 633 PADKAVLPIFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTS 692
Query: 750 TYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI 809
TYDG LA AI E++ + I A TLF+TH+HELT L + + + N HVSA
Sbjct: 693 TYDGMALAQAIIEYIHDHIGAKTLFSTHYHELTDL---------EQSLPKLKNVHVSAVE 743
Query: 810 DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
++ K+ L+K+E G DQS+GIHVAE A P S++ A E
Sbjct: 744 ENG--KVVFLHKIEEGPADQSYGIHVAELAGLPSSLIRRAEE 783
>gi|418628482|ref|ZP_13191027.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU127]
gi|374837328|gb|EHS00894.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU127]
Length = 873
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 314/583 (53%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTPL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|217967464|ref|YP_002352970.1| DNA mismatch repair protein MutS [Dictyoglomus turgidum DSM 6724]
gi|217336563|gb|ACK42356.1| DNA mismatch repair protein MutS [Dictyoglomus turgidum DSM 6724]
Length = 853
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 313/574 (54%), Gaps = 33/574 (5%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y Y+ LDS A++ L +LE+ + + SL ++++T T+ MG RLL WL QPLL+V
Sbjct: 256 YKPQQYLILDSTAIKHLELLETVREGQRRGSLIWVLDKTLTS-MGARLLKKWLLQPLLNV 314
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I R + ++ F+D R+++ + LK + D+ER+ + A ++++ L Q+ L
Sbjct: 315 NAIKKRQEAIKEFLDKDPWRREMEEILKEMPDLERINSRINYNTATPKELIYLRQALSFL 374
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P +R +L++ E +KE L LE L ++ L++ ALVE+ +++G Y I
Sbjct: 375 PLLRKSLEKAESNRLKELKEN-LPNLEPLYEE--LDR--ALVESPPS--HIKDGGY-IKD 426
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
YD L L+ + + +L + + K+LK+ FG+ +TK
Sbjct: 427 GYDPNLDELRKLLRESKDWLINLENRERERTGI---KSLKIGYNQVFGYYIEVTKAN--- 480
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
+ + +I +T + +F +LK+ ++ + K ++EL + + + S+
Sbjct: 481 -LNLVPSDYIRKQTLVNAERFITPELKEWENKILHAEDNIKKIEEELFQNLRKKVIKHSK 539
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVN 643
+ A ++E+DV +S A A Y P I D II EG RHP +E
Sbjct: 540 DITTFAQTIAEIDVYISLAKAAREYN--YVCPQITN-DYEVIIREG-RHPVIERMLPPGT 595
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
F+PND L + K + +ITGPNM GKST+IRQ+ + I++AQ+GSF+P A I V D IF
Sbjct: 596 FVPNDAYLNKDK-FIDLITGPNMAGKSTYIRQIALIIILAQMGSFIPAKEAKIGVVDRIF 654
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
R+GA D G STF+ EM E +IL AT+RSLII+DE+GRGTSTYDG +AWAI E+
Sbjct: 655 TRIGAWDDISSGESTFLVEMKEVGNILSHATERSLIILDEVGRGTSTYDGISIAWAIVEY 714
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
+ +I+A TLFATH+HELT L K++ + N +S + + + L+K+
Sbjct: 715 IHNKIKAKTLFATHYHELTELE---------KELKHLKN--LSVAVQEKGKDIIFLHKIA 763
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
D+S+GI+VA+ A+ P+ V+ A + ELE
Sbjct: 764 EKPADKSYGIYVAQLADLPKEVIERAEKILFELE 797
>gi|288932103|ref|YP_003436163.1| DNA mismatch repair protein MutS [Ferroglobus placidus DSM 10642]
gi|288894351|gb|ADC65888.1| DNA mismatch repair protein MutS [Ferroglobus placidus DSM 10642]
Length = 820
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 212/605 (35%), Positives = 320/605 (52%), Gaps = 64/605 (10%)
Query: 260 ALGALLSYAE---LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
A GA+L+YA+ L S + ++K YM LDS ++ L + + D + +L
Sbjct: 220 ACGAVLNYAKNSLLFSKPA----LKLQKLERSEYMVLDSTTIKNLEIFRNLVDGGRRGTL 275
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
++++T TA MG RLL WL++PLLDV EI RLD V+ + + +R+ LR+ L+ + D
Sbjct: 276 LDVIDKTVTA-MGSRLLKKWLQRPLLDVTEIERRLDAVEELKEKSFVRRVLRETLEDVYD 334
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY-LDPLESLTD 435
+ER++ LE +A + +V L S + +++++ Q L Y ++P+E L
Sbjct: 335 LERIITRLELGKANPKDLVALKNSLKAV----GKIKKFDFQSKKLRDLVYGMNPMEELC- 389
Query: 436 DDHLNKFIALVETSVDLDQLENGE--YMISSSYDTGLSALKNEQESLERQIHSLH----K 489
+L+E ++ D N + +I +D L L+ ++ E I L K
Sbjct: 390 --------SLIEKAIVEDPPANVKDGGVIREGFDEELDELRKAKKEQEEFIKRLEERERK 441
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+T D L++ FG+ I K + K L +I +T + +FT +
Sbjct: 442 RTGID-------NLRVGYNNVFGYYIEIPKSKA----KNLPRYYIRKQTLVNAERFTIPE 490
Query: 550 LKKLGDQYQKVL---EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK D+ +K+L E + ++E+ R+ + V +E K A ++ELDVL S A++A
Sbjct: 491 LK---DREEKILAYEERIRILEQEIFERIRREVVRHAEKVKDSAERVAELDVLCSLAEVA 547
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNM 666
+ YTRP +N + DII+ RHP VE F+PND L S IITGPNM
Sbjct: 548 TLYN--YTRPKVN--EGFDIIIRDGRHPAVETT--TKFVPNDVNLTEN-SRILIITGPNM 600
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST++RQV + ++AQ+GSFVP A + + D IF R+G D RG STFM EMLE
Sbjct: 601 AGKSTYLRQVALITILAQIGSFVPASYAVVGIVDKIFTRIGLVDDITRGRSTFMVEMLEI 660
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
IL AT RSLI++DE+G+ T T +G LAWAI E+L E+ A LFATH+HEL+ L +
Sbjct: 661 GRILNNATKRSLILLDEVGKSTGTKEGLSLAWAIIEYL-HELGAKVLFATHYHELSKLEN 719
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
E + GV NYH + + K+ K+ G +S+GI +AE AN P+ VV
Sbjct: 720 E---------LAGVKNYHF--RLKEENGKVEFDRKIRRGFSKESYGIKIAEMANLPKRVV 768
Query: 847 TLARE 851
A E
Sbjct: 769 ERAYE 773
>gi|423720505|ref|ZP_17694687.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidans
TNO-09.020]
gi|383366560|gb|EID43850.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidans
TNO-09.020]
Length = 864
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 232/762 (30%), Positives = 371/762 (48%), Gaps = 105/762 (13%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLT---KRVLGL 169
+V+ TPG + +L N T V LF + T G Y DL+ R+ L
Sbjct: 104 VVQLITPGTVMEGRGLLEKENNYLAT---VTLFAD-----GTYGFAYTDLSTGENRITIL 155
Query: 170 AEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKT 229
A F D V + L A+G KE +L ++ S E + L++ R GV ++ TE
Sbjct: 156 ASFED------VMNELYAIGTKEIVLASD-FPSDEQQLLKE---RYGVTISYEDGTE--- 202
Query: 230 RDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGA---LLSYAELLSDESNYGNYYIRK-- 284
+ GF G L +++A LL +Y IR
Sbjct: 203 --------------------MPEGFATIAGGLAQDKLQITFARLL-------HYIIRTQK 235
Query: 285 -----------YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
Y +D YM++D + R L + E+ + SL L++ T TA MG RLL
Sbjct: 236 RRLDHMQPVQVYQVDHYMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTA-MGGRLL 294
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
WL +PLLD +I RL +V+ + RQ+LR+ L+ + D+ERL + +
Sbjct: 295 KQWLDRPLLDRGQIERRLHMVETLIHHYFERQELRERLREVYDVERLAGRVAYGNVNARD 354
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD 453
+++L +S ++P ++ + + + + ++ LDP L D L+E S+ +
Sbjct: 355 LIQLKKSLQQIPALKDIVAKLADNQAQQLADK-LDPCSELVD---------LLERSIQEN 404
Query: 454 ---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQ 510
++ G +I Y+ L ++ + + I L + + +L K+LK+
Sbjct: 405 PPLSVKEGN-IIKDGYNETLDRFRDASRNGKSWIAQLE---SKERELTGIKSLKIGYNRV 460
Query: 511 FGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKE 570
FG+ +TK P + ++ +T + +F +LK+ + E+ + E
Sbjct: 461 FGYYIEVTK---PNLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYE 517
Query: 571 LVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEG 630
L + + + +SLA +SELDVL SFA ++ Y +P + + +++++
Sbjct: 518 LFVDIRERVKQYIPRLQSLAKAISELDVLQSFATVSEE--RHYVKPQFS--EHRELVIQA 573
Query: 631 SRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
RHP VE ++PNDC + + + +ITGPNM GKST++RQ+ + +MAQ+G FV
Sbjct: 574 GRHPVVEKVLGTQTYVPNDCYMNKERELL-LITGPNMSGKSTYMRQIALTAIMAQIGCFV 632
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
P D+A + + D +F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTS
Sbjct: 633 PADKAVLPIFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTS 692
Query: 750 TYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI 809
TYDG LA AI E++ + I A TLF+TH+HELT L + + + N HVSA
Sbjct: 693 TYDGMALAQAIIEYIHDHIGAKTLFSTHYHELTDL---------EQSLPKLKNVHVSAVE 743
Query: 810 DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
++ K+ L+K+E G DQS+GIHVAE A P S++ A E
Sbjct: 744 ENG--KVVFLHKIEEGPADQSYGIHVAELAGLPSSLIRRAEE 783
>gi|417646303|ref|ZP_12296164.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU144]
gi|329728032|gb|EGG64476.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU144]
Length = 873
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 204/583 (34%), Positives = 315/583 (54%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVSQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|418622020|ref|ZP_13184776.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU123]
gi|374827395|gb|EHR91257.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU123]
Length = 873
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 202/577 (35%), Positives = 317/577 (54%), Gaps = 49/577 (8%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMIS 463
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ +E I
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESL----VEEPPISIK 403
Query: 464 SS--YDTGLSALKNEQ-ESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+ G +A +E E+ ++ L + A + + K+LK+ FG+ IT+
Sbjct: 404 DGGLFKNGFNAQLDEYLEASKKGKTWLAELQAKERERTGIKSLKISFNKVFGYFIEITRA 463
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRV 575
+ + + +T + +F +LK+ LG + + V EY EL ++
Sbjct: 464 NLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----ELFVKL 517
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ T++E + A ++SELD L SFA++A Y +P + V + LE SRHP
Sbjct: 518 REHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLENSRHPV 573
Query: 636 VE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++VPCD A
Sbjct: 574 VERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDSA 632
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTYDG
Sbjct: 633 TLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTYDGL 692
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSAHIDSTS 813
LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A +
Sbjct: 693 ALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA--NEYQ 740
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 741 GELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|291542654|emb|CBL15764.1| DNA mismatch repair protein MutS [Ruminococcus bromii L2-63]
Length = 859
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 234/720 (32%), Positives = 352/720 (48%), Gaps = 66/720 (9%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
TIGL + D++ L E + + + + L + +E L+ + VK E A
Sbjct: 130 TIGLCFCDISTGELYATEIRGNDSYNVLTNQLTSYNPREILIGGDIVKLKELPKFIKAKL 189
Query: 214 RCGV-MLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLS 272
GV ML + K E D+V + E VS + LGALLSY L
Sbjct: 190 SAGVEMLEDEKFDESVCTDVV-------KSQFEDEYSTVSDKSVVVCVLGALLSY---LR 239
Query: 273 DESNYG---NYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
D G +I Y + YM LD R L + ++ +K SL ++++T TA MG
Sbjct: 240 DTQKTGLERINHIEFYKENQYMSLDYNTQRNLELTQTMLTKDKKGSLLWVLDKTKTA-MG 298
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
KRL+ WL+ PLL++ IN R ++ V+D LR D+ L I DIERLM + A
Sbjct: 299 KRLMRSWLEHPLLNITSINNRQSAIEELVNDNMLRMDVTDTLSGIFDIERLMTRIVYGSA 358
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDHLNKFIALVE 447
+ + L + LP I L + + I + L+ + SL D A+VE
Sbjct: 359 NARDLRSLCGAIQNLPQISDLLVDCKSVYLKYIYKSIDKLEDIHSLIDS-------AIVE 411
Query: 448 TSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDK 507
E G MI Y+ L ++ + + + + + +P LK+
Sbjct: 412 EP-PFTVREGG--MIKRGYNEELDSVTGDMNDSKGILARIEAEQRDITGIP---KLKVGY 465
Query: 508 GTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLE 562
FG+ ++ + + + +I +T + ++ LK LG + + V
Sbjct: 466 NRVFGYYIEVSNSYKSMVPE----TYIRKQTLTNCERYITQDLKDVEGRILGAKDRSVAL 521
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
EY L + V +T E + A ++ LDV+ S A++A+ Y RPD+N
Sbjct: 522 EYN-----LFDDVRKTVSDNLERIQKTAKAIANLDVITSLANVAAD--NRYIRPDVNLST 574
Query: 623 VGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
I ++ SRHP VEA +D F+PND L IITGPNM GKST++RQ+ + +
Sbjct: 575 A--IRIKDSRHPVVEALLKD-APFVPNDVSLDSANDRVAIITGPNMAGKSTYMRQIAIIV 631
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
LMAQ+GSFVP A I + D IF RVGA D G STFM EM E A+I+K AT +SL+I
Sbjct: 632 LMAQIGSFVPASSAEIGIVDSIFTRVGASDDLASGQSTFMVEMSEVANIIKNATSKSLLI 691
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMV 798
+DE+GRGTST+DG +A A+ E + ++ A TLFATH+HELT + +Q++
Sbjct: 692 LDEIGRGTSTFDGMSIARAVLEFCADRKKLGAKTLFATHYHELTVM----------EQLL 741
Query: 799 -GVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
GV NY+++ + +T L ++ PG D S+GI VA+ A P+SV++ A+E +LE
Sbjct: 742 DGVKNYNIA--VKKRGDDITFLRRIVPGGADDSYGIEVAKLAGIPQSVISRAKEILKDLE 799
>gi|125973295|ref|YP_001037205.1| DNA mismatch repair protein MutS [Clostridium thermocellum ATCC
27405]
gi|256003775|ref|ZP_05428763.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
2360]
gi|281417499|ref|ZP_06248519.1| DNA mismatch repair protein MutS [Clostridium thermocellum JW20]
gi|385778793|ref|YP_005687958.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
1313]
gi|419723190|ref|ZP_14250325.1| DNA mismatch repair protein MutS [Clostridium thermocellum AD2]
gi|419724906|ref|ZP_14251961.1| DNA mismatch repair protein MutS [Clostridium thermocellum YS]
gi|171769986|sp|A3DDI3.1|MUTS_CLOTH RecName: Full=DNA mismatch repair protein MutS
gi|125713520|gb|ABN52012.1| DNA mismatch repair protein MutS [Clostridium thermocellum ATCC
27405]
gi|255992336|gb|EEU02430.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
2360]
gi|281408901|gb|EFB39159.1| DNA mismatch repair protein MutS [Clostridium thermocellum JW20]
gi|316940473|gb|ADU74507.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
1313]
gi|380771526|gb|EIC05391.1| DNA mismatch repair protein MutS [Clostridium thermocellum YS]
gi|380780957|gb|EIC10620.1| DNA mismatch repair protein MutS [Clostridium thermocellum AD2]
Length = 870
Score = 295 bits (755), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 205/624 (32%), Positives = 330/624 (52%), Gaps = 64/624 (10%)
Query: 252 SGFEIAPGALGALLSYAELLS--DESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+ F++ A GALL Y E + S+ N+ + Y ++ YM LD A R L + E+ +
Sbjct: 228 NAFDLYINASGALLEYLEQTQKVNLSHIQNFNV--YRIEEYMILDMATRRNLELTETMRE 285
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
N+ SL +++RT T+ MG R L W++QPL+++++I RLD V F + +R ++R+
Sbjct: 286 KNRKGSLLWVLDRTMTS-MGGRTLRKWIEQPLINLHDIKDRLDAVNEFKERFMIRSEVRE 344
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
L+ + DIERLM + A + ++ + S ++PYI+ L+ + + L +
Sbjct: 345 LLRAVYDIERLMTKVILGSANCRDLISIKHSIGQVPYIKELLRDLKADLNVL----SYNE 400
Query: 430 LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
L++LTD + + + V + E G +I ++ + L++ + ++ I L
Sbjct: 401 LDTLTDVYEIIDKAIVDDPPVAVK--EGG--IIKEGFNEEVDRLRSASKDGKKWIAHLES 456
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ + K LK+ FG+ +TK ++ +I +T + ++ +
Sbjct: 457 KERERTGI---KNLKVGFNKVFGYYIEVTKSYYSQV----PDDYIRKQTLANCERYITPE 509
Query: 550 LKKLGD------------QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELD 597
LK++ + +YQ ++ KE +NR+ K+ A L+ +D
Sbjct: 510 LKEIENTVLGAEDRLVELEYQIFVDVRNKVAKE-INRL-----------KTTARSLARID 557
Query: 598 VLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRG 654
VL S A++A YT P++ D I ++ RHP VE Q+ F+PND L
Sbjct: 558 VLCSLAEVADR--ESYTMPEVTDDD--KIEIKDGRHPVVEKIIGQE--AFVPNDTYLDMD 611
Query: 655 KSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLR 714
++ IITGPNM GKST++RQV + +LMAQ+GSFVP A I + D IF RVGA D
Sbjct: 612 ENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAKIGIVDRIFTRVGASDDLAA 671
Query: 715 GVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLF 774
G STFM EM E A+IL AT +SL+++DE+GRGTSTYDG +AWA+ E++ E+I A TLF
Sbjct: 672 GQSTFMVEMSEVANILGNATSKSLLVLDEIGRGTSTYDGLSIAWAVIEYIGEKIGARTLF 731
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATH+HELT L +++ G+ NY +S ++ + L K+ G D S+G+
Sbjct: 732 ATHYHELTELE---------ERIEGIKNYCIS--VEEKGEDIIFLRKILRGGADNSYGVQ 780
Query: 835 VAEFANFPESVVTLAREKAAELED 858
VA A P+ V+ A+E +LED
Sbjct: 781 VARLAGIPDPVIHRAKEILKKLED 804
>gi|423082694|ref|ZP_17071283.1| DNA mismatch repair protein MutS [Clostridium difficile
002-P50-2011]
gi|423087012|ref|ZP_17075402.1| DNA mismatch repair protein MutS [Clostridium difficile
050-P50-2011]
gi|357545261|gb|EHJ27236.1| DNA mismatch repair protein MutS [Clostridium difficile
050-P50-2011]
gi|357547812|gb|EHJ29687.1| DNA mismatch repair protein MutS [Clostridium difficile
002-P50-2011]
Length = 947
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 194/572 (33%), Positives = 307/572 (53%), Gaps = 36/572 (6%)
Query: 290 YMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
YM LD L + ++ K SL ++++T TA MG RLL ++++PL++ ++I
Sbjct: 264 YMVLDMFTRTNLELTQTIRGNKKKGSLLHVLDKTSTA-MGGRLLRKYVEEPLINKSKIEN 322
Query: 350 RLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS 409
RLD+++ DD LR+DL LK I DIER+ + R ++++ L S +LP ++
Sbjct: 323 RLDVIEEIKDDFILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSIEKLPNLKD 382
Query: 410 ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
+ + I ++Y+ ++ L D +L L E ++ +++G +I S +
Sbjct: 383 TINLSNAK----ILKKYVSEMDKLDDIYNLIDEAILEEPTI---TIKDGN-IIKSDFSDE 434
Query: 470 LSALKNEQES---LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L L+ ++ L ++I + ++ K+LK+ FG+ ITK +
Sbjct: 435 LKELREISKNGAFLVKEIENREREKTGV------KSLKIGFNKVFGYYIEITKANFK--Q 486
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
KL +I +T + ++ +LK++ ++ E+ K+ + E+ + T +
Sbjct: 487 AKLDETYIRKQTLSNAERYITPELKEIEEKILHAEEKIKSLEYEIFVEIRDTIYKNIDRI 546
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFI 645
+ +A +++ +DV +S A +A Y +P IN + DI RHP VE NF+
Sbjct: 547 QKVAKIIANIDVFVSLATVAH--INNYVKPAINENNKLDI--RNGRHPVVENIVGEENFV 602
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
PND L RG++ IITGPNM GKST++RQ + LMA +GSFVP + A I + D IF R
Sbjct: 603 PNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAESADIPILDRIFTR 662
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D +G STFM EM E + ILK AT+RSL+I+DE+GRGTSTYDG LAW+I E++
Sbjct: 663 VGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVEYIQ 722
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+ IR TLFATH+HELT L E V NY ++ D + L K+ P
Sbjct: 723 KNIRCKTLFATHYHELTDLEEE---------FKEVKNYSIAVKEDGEG--IIFLRKIIPQ 771
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
D+S+GI+VA+ A P+ V+ A+ +LE
Sbjct: 772 GADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>gi|300711943|ref|YP_003737757.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|448295633|ref|ZP_21485697.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|299125626|gb|ADJ15965.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|445583732|gb|ELY38061.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
Length = 882
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 232/692 (33%), Positives = 351/692 (50%), Gaps = 50/692 (7%)
Query: 246 PVRDLVSGFEIAPGALGALLSYAELLSDESN----YGNYYIRKYSLDSYMRLDSAAMRAL 301
P + L S EI A GALLSYAE + Y N+ R Y YM LD A R+L
Sbjct: 231 PEKRLASDAEIR--ACGALLSYAEYARGGQDGRLDYLNHLTR-YEPREYMLLDRVAFRSL 287
Query: 302 NVLESKT-DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
+ E + + ++ G+++ T A +G+R L WL++PLLD I ARLD V +
Sbjct: 288 ELFEPRAVGGDSEHTILGVLDETACA-LGRRKLTDWLRRPLLDRARIEARLDAVSEWTTL 346
Query: 361 TALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSS 420
R+ + L + DIERL+ + + RA + + L + R+P IR+A+ E
Sbjct: 347 VGPRETVHDLLSDVYDIERLIARVSRGRANARDLRALKDTLDRVPEIRAAMAGVESDTLH 406
Query: 421 LIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESL 480
++E LD LE + + +++ IA S ++ E +I+ YD L L+ +
Sbjct: 407 ELRE-GLDELEGVRE--LIDRAIA---ESPPIEITEGD--VIAPGYDADLDGLRETEREG 458
Query: 481 ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK 540
+ I SL + + +LK+ G+ +T ++ + T + +T K
Sbjct: 459 KEWIDSLEARERERTGV---DSLKVGFNQVHGYYIEVTNPNLERVPENYTRR----QTLK 511
Query: 541 DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLL 600
+ +F +LK+ D+ E + + EL V Q SE +++A L+ LDVL+
Sbjct: 512 NSERFYTPELKQREDEIITAEERADDLEYELFVEVRQEVAGESERVQAVAETLATLDVLV 571
Query: 601 SFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQI 660
S A +A+ Y RP+I+ + I +EG RHP VE + +F+PN +L + +
Sbjct: 572 SLAAVAAKYG--YARPEID--EEPGIAIEGGRHPVVE-RTQESFVPNGAELTPDER-LAV 625
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
+TGPNM GKST++RQ+ + ++AQ+GSFVP RA I + D +F RVGA D G STFM
Sbjct: 626 LTGPNMSGKSTYMRQIALITILAQIGSFVPASRARIGIVDRVFTRVGASDDIAGGRSTFM 685
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
EM E A+IL+GA++RSL+++DE+GRGTST DG +A AI E++ E+ A TLFATH HE
Sbjct: 686 VEMSELATILRGASERSLVLLDEVGRGTSTADGLAIARAITEYVHSEVGALTLFATHHHE 745
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN 840
LT LA A F N H +A T +T + V GA S+GI VA A
Sbjct: 746 LTELADALAGGF---------NLHFAAT--QTDDGVTFRHDVSRGAATASYGIEVARAAG 794
Query: 841 FPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKR--KRISDPNDMSRGAARAH---Q 895
P+ VV +R AE +P +D + VGS+ SD N S G A + +
Sbjct: 795 VPDRVVERSRALVAE---GSPENA-TDGGETIVGSRTLPNPDSDDNPSSGGPAPSSADGE 850
Query: 896 FLKEFSDMPLETMDLKEALERVKRMKDDLEKD 927
+ + + M EAL + R+K + +D
Sbjct: 851 LTEALRALDVANMTPIEALTTLDRLKHEANED 882
>gi|23099086|ref|NP_692552.1| DNA mismatch repair protein MutS [Oceanobacillus iheyensis HTE831]
gi|44888208|sp|Q8CXG6.1|MUTS_OCEIH RecName: Full=DNA mismatch repair protein MutS
gi|22777314|dbj|BAC13587.1| DNA mismatch repair protein (mismatch recognition step)
[Oceanobacillus iheyensis HTE831]
Length = 867
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 216/684 (31%), Positives = 344/684 (50%), Gaps = 57/684 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A LL+Y + S + L YM LD + R L + E+ +K+ SL +
Sbjct: 223 AFSRLLNYIQTTQKRSLHHLQKAEVIELKKYMSLDMYSKRNLELTETIMKKSKHGSLLWV 282
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R L WL++PLL +IN RL++VQ F D R+ LR LK + D+ER
Sbjct: 283 LDKTVTA-MGARTLKKWLERPLLSKQKINERLEVVQGFYDGFMERESLRDLLKSVYDLER 341
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP---LESLTDD 436
L + + +++L QS R+P I+ L+Q++ + + E + P +ESL
Sbjct: 342 LSGRIAFGNVNARDLIQLKQSLSRIPAIQETLRQFDQPEITRLAEMLIYPEQMVESLEKS 401
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
I++ E S +I Y L ++ + ++ I L Q +
Sbjct: 402 IVDEPPISIKEGS-----------LIKEGYHDQLDTYRDASRNGKKWIAQLEHQEREETG 450
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+ ++LK+ FG+ ITK P + ++ +T + +F N +LK +
Sbjct: 451 I---RSLKVGYNRVFGYYIEITK---PNLHLLPEGRYERRQTLTNAERFVNEELK----E 500
Query: 557 YQKVLEEYKNCQKEL-VNRVIQTAVTFSE---IFKSLATMLSELDVLLSFADLASSCPTP 612
+K++ E + EL + IQ E + + LA ++S++DVL SFA ++ S
Sbjct: 501 KEKLILEAEEKSVELEYDLFIQIRDQIKEEIPLIQQLAHIISQMDVLQSFATVSES--NN 558
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
Y RPD N + + RHP VE +D F+PND + ++ +ITGPNM GKS
Sbjct: 559 YVRPDFNDEQLQ---VTKGRHPVVEQVMKDGT-FVPNDVVFDKSQNML-LITGPNMSGKS 613
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQV + +M Q+G F+P ++A++ V D IF R+GA D + G STFM EMLE +
Sbjct: 614 TYMRQVALTSIMGQIGCFIPAEQATLCVFDQIFTRIGAADDLVSGQSTFMVEMLEARHAI 673
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
ATDRSLI++DE+GRGTSTYDG LA AI E++ I A TLF+TH+HELTAL
Sbjct: 674 SNATDRSLILLDEIGRGTSTYDGMALAQAIVEYIHHNIAAKTLFSTHYHELTALE----- 728
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ + N HV A + + L++++ GA DQS+GIHVA+ A+ P ++ A
Sbjct: 729 ----DSLHHLKNIHVRA--EEHEGNVVFLHQIKEGAADQSYGIHVAKLADLPNELIERAS 782
Query: 851 EKAAELEDFTPSAVISDDAKIEVG--------SKRKRISDPNDMSRGAARAHQFLKEFSD 902
ELED + K+E G S +K+ P + +++ +
Sbjct: 783 VILEELEDDSNKKPTPTKDKLESGQLSFFIEESNKKKAEMPKQEKTHNNQEQSVIEDLKN 842
Query: 903 MPLETMDLKEALERVKRMKDDLEK 926
+ + + EA+ + R++ L++
Sbjct: 843 VNVLDLTPLEAMNELYRLQKGLKQ 866
>gi|307354004|ref|YP_003895055.1| DNA mismatch repair protein MutS [Methanoplanus petrolearius DSM
11571]
gi|307157237|gb|ADN36617.1| DNA mismatch repair protein MutS [Methanoplanus petrolearius DSM
11571]
Length = 881
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 252/842 (29%), Positives = 405/842 (48%), Gaps = 62/842 (7%)
Query: 24 FYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD-ALSSVSVSK 82
FY+ V FF D+Y GE+A +++ T T+ + G L+ V +
Sbjct: 12 FYEMKSKHPGTVLFFQMGDFYETFGEDAEVVSRELDITLTSRGRDKNGEKMPLAGVPIHA 71
Query: 83 N---MFETIARDLLLERTDHTLELYEGSGSNWR-LVKSGTPGNLGSYEDVLFANNEMQDT 138
+ + + + D + + G R +V+ TPG + + E
Sbjct: 72 GESYISRLVKKGYRVAVCDQIEDPKKAKGIVKRDVVRIITPGTI-----IDSGMIENSGP 126
Query: 139 PVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTE 198
++++ P +G +G ++D++ ++ + F+ + S + EC++P
Sbjct: 127 SYLMSVMPG--RDGEDLGFAFLDISTGEFFISGSGNGEMFSQINSEIARYRPSECIVPEN 184
Query: 199 AVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQD--LDRLVRGSVEPVRDLVSGFEI 256
K + D +T V++T F D ++ L++ S+E + G ++
Sbjct: 185 CPKK-----ISDYITGRNVLVTGYDTLHFDI-DTARNYLLEKFEVNSLEGYGCM--GMDL 236
Query: 257 APGALGALLSYA--ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLES-KTDANKN 313
+ A GA LSYA SD S+ + R S M LD+ +R L VLE+ +T KN
Sbjct: 237 SVCAAGACLSYACETQKSDLSHIRGFSTRLPS--GSMVLDAITLRNLEVLENIRTRQGKN 294
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL+ +++ T T MG R+L WL PL+D + IN+RL+ V+ F ++ +R+ LR L R
Sbjct: 295 -SLYDILDETKTP-MGSRVLRSWLTAPLVDRDNINSRLNAVEFFFNNLYIRESLRFLLHR 352
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
+DIER+ + AG +++V L S ++P IRS + EG + + L +ESL
Sbjct: 353 YADIERIAARISYGNAGPRELVTLKNSLAKIPEIRSLFSE-EGAVTPELISCSLGSIESL 411
Query: 434 TDDDHLNKFIALVETSVDLDQ--LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
++ + L+E S++ + L +I Y+ L L++ S + I +
Sbjct: 412 ------DECVELIERSIEDEPPVLARTGGVIKKGYNHDLDELRDSSGSAKEWIAQFQQD- 464
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+ D K+LK+ FG+ +TK K + ++ +T +G +FT +L+
Sbjct: 465 --ERDRTGIKSLKVSYNKVFGYYIEVTKSN----LKLVPQEYQRKQTTANGERFTLPQLQ 518
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
+ E + +++L + ++ E A M+ LDVL FA L+S+
Sbjct: 519 EKESLIVNAEERFIALEQDLYDGILTELREKVEEILETAKMIGRLDVLADFAHLSSNFN- 577
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKST 671
Y RP I D +++ RHP VE F+PND + + IITG NM GKST
Sbjct: 578 -YVRPVIE--DSARLLISDGRHPVVERNQSSGFVPNDAGIDSSDNQILIITGANMAGKST 634
Query: 672 FIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 731
++R+V + +MAQ G FVP A I + D IF RVGA D G STFM EMLE A+IL
Sbjct: 635 YMREVALLCIMAQAGCFVPASGAVIGIIDRIFTRVGAFDDLSSGQSTFMVEMLELANILN 694
Query: 732 GATDRSLIIIDELGRGTSTYDGFGLAWAICEHL-VEEIRAP-TLFATHFHELTALAHENA 789
TD+SL+I+DE+GRGTST DG+ +A A+ E+L P TLFATHFHE+ +
Sbjct: 695 NVTDKSLVILDEIGRGTSTLDGYSIACAVIEYLHGSGSSGPRTLFATHFHEMVDIE---- 750
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
+M V NYH + + T + L K+ PGA D+S+GIHVA+ A P V+ +
Sbjct: 751 -----GKMKRVKNYHFA--VKDTGSDIVFLRKLIPGASDKSYGIHVAKLAGIPRKVLKRS 803
Query: 850 RE 851
E
Sbjct: 804 EE 805
>gi|239826703|ref|YP_002949327.1| DNA mismatch repair protein MutS [Geobacillus sp. WCH70]
gi|259511169|sp|C5D9H5.1|MUTS_GEOSW RecName: Full=DNA mismatch repair protein MutS
gi|239806996|gb|ACS24061.1| DNA mismatch repair protein MutS [Geobacillus sp. WCH70]
Length = 860
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 313/583 (53%), Gaps = 44/583 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++ Y +D YM++D + R L + E+ + SL L++ T TA MG RLL WL +PL
Sbjct: 244 VQVYQVDHYMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTA-MGGRLLKQWLDRPL 302
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
LD +I RL +V+ + RQ+LR+ L+ + D+ERL + + +++L +S
Sbjct: 303 LDRKQIERRLHMVETLIHHYFERQELRERLREVYDVERLAGRVAYGNVNARDLIQLKKSL 362
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ +++ + + + LDP L D L+E S+ + ++ G
Sbjct: 363 QQIPALKDIVEKLPDHEAKQLANK-LDPCSELVD---------LLERSIQENPPLSVKEG 412
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I Y+ L ++ + + I L + + +L K+LK+ FG+ +T
Sbjct: 413 N-IIKDGYNETLDRYRDASRNGKAWIAQLE---SKERELTGIKSLKIGYNRVFGYYIEVT 468
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K P + ++ +T + +F +LK+ + E+ + EL + +
Sbjct: 469 K---PNLHLLPKGRYERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFVDIRER 525
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ +SLA +SELDVL SFA ++ Y +P + D ++I++ RHP VE
Sbjct: 526 VKQYIPRLQSLAKTISELDVLQSFATVSEE--RHYVKPQFS--DNRELIIQAGRHPVVEK 581
Query: 638 ---AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
AQ +V PNDC + + + +ITGPNM GKST++RQ+ + ++MAQ+G FVP ++A
Sbjct: 582 VLGAQTYV---PNDCYMNKERELL-LITGPNMSGKSTYMRQIALTVIMAQIGCFVPAEKA 637
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+ + D +F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTSTYDG
Sbjct: 638 VLPIFDQVFTRIGAADDLVSGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGM 697
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
LA AI E++ + I A TLF+TH+HELT L + + + N HV A ++
Sbjct: 698 ALAQAIIEYIHDHIGAKTLFSTHYHELTDLE---------QSLAKLKNVHVRAVEENG-- 746
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
K+ L+K+E G DQS+GIHVAE A P S++ A+E AELE
Sbjct: 747 KVVFLHKIEEGPADQSYGIHVAELAELPASLIQRAKEILAELE 789
>gi|433654964|ref|YP_007298672.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293153|gb|AGB18975.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 857
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 312/580 (53%), Gaps = 43/580 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDAN-KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
Y +S+M LD+ ++ L +++S N ++ +L ++++T T MG RLL W+++PL+D
Sbjct: 258 YEDNSFMLLDNNTIKNLEIVQSPNRNNSRDGTLLSVLDQTVTP-MGGRLLKRWIEEPLID 316
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+ +IN RLD V +D R DLR LK I D+ERL L + + ++ + S R
Sbjct: 317 IEKINLRLDSVDELFNDFKGRSDLRNALKGIYDLERLSSKLVYQNINAKDLLSIKVSIER 376
Query: 404 LPYIRSALQQYEGQFSSLIKERYL--DPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
LP I+ + +Y + +KE +L D L+ + D L+E S+ D ++ G
Sbjct: 377 LPKIKDLISKYNSIY---LKEIFLKLDTLQDICD---------LIEKSIKDDPSTSVKEG 424
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I +D + L+ + + I +L + K LK+ FG+ ++
Sbjct: 425 N-IIKDGFDKNVDELRKAATNGKSWITNLELNEKERTGI---KTLKVGYNKVFGYFIEVS 480
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K + + +I +T + ++ +LK++ ++ + + E+ N + +
Sbjct: 481 KSYISSVPQ----NYIRKQTLANAERYITPELKEIEEKILGAETKLVELEYEIFNSIREQ 536
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ + ++ LDVL S A +A S Y +P +N D I+++ RHP +E
Sbjct: 537 IKNEINRIQMTSKYIAVLDVLTSLAMVAES--NNYVKPIVNDGD--RILIKDGRHPVIET 592
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
+FI ND + I K IITGPNM GKST++RQV + +LMAQVGSFVP A I +
Sbjct: 593 IVDDSFISNDIE-IDEKKPIMIITGPNMAGKSTYMRQVALIVLMAQVGSFVPASYAEIGI 651
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF RVGA D G STFM EM E + IL AT +SLII+DE+GRGTSTYDG +A
Sbjct: 652 VDRIFTRVGASDDLFSGQSTFMVEMNEVSVILNSATQKSLIILDEVGRGTSTYDGMSIAC 711
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
AI E++ ++I+A T+FATH+HELT L Q+ G+ NY++S +D T+ ++
Sbjct: 712 AILEYIHDKIKAKTMFATHYHELTKLED---------QLNGIKNYNIS--VDETNDEIIF 760
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
L K+ PG+ D+S+GI VA+ A P V+ A++ LE+
Sbjct: 761 LRKIIPGSADKSYGIQVAKLAGLPNDVIDNAKKILNSLEN 800
>gi|218961253|ref|YP_001741028.1| DNA mismatch repair protein [Candidatus Cloacamonas
acidaminovorans]
gi|167729910|emb|CAO80822.1| DNA mismatch repair protein [Candidatus Cloacamonas acidaminovorans
str. Evry]
Length = 876
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 199/583 (34%), Positives = 309/583 (53%), Gaps = 42/583 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+R YSL YM+LD + R L ++ S K SL ++++T T MG RLL WL PL
Sbjct: 259 LRYYSLSQYMQLDEISRRNLELVRSIRYGTKYGSLLSVIDQTMTP-MGSRLLQQWLLHPL 317
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
LD+ EI R DI+Q+F+D ++ ++LR LK I DI RL+ L R ++++ L
Sbjct: 318 LDIKEITFRQDIIQSFIDKSSHLKELRLILKEIGDITRLVTRLGSLRINPRELIALKSYL 377
Query: 402 IRLPYIRSALQQYE-GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD----LDQLE 456
+++ L +E QF+ + ++ + E + IAL+E +++ + E
Sbjct: 378 YSARNLQTKLSTFEHPQFA--VWQQNMGSFEDI---------IALIEKAINDNPPISITE 426
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
G + + Y+ L L + + I L + + LK+ FG+
Sbjct: 427 GG--IFAKGYNPELDELMDIIYDGKSWIARLEEDERRKTGI---NNLKVGYNRVFGYYIE 481
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
++ + K+ +I +T + +F + +LK+ + E+ KN + EL +
Sbjct: 482 VSSAN----KNKVPDYYIPKQTLTNSERFISPRLKEFEAKVLSSEEKIKNLEYELFKELR 537
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
Q F+ L+ +++ELDVL S A LA Y+RP II RHP +
Sbjct: 538 QNLAESLPRFQQLSEVIAELDVLSSLAFLA--WQNQYSRPVFTESRELHII--DGRHPVI 593
Query: 637 EA-QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E + FIPND L ++ IITGPNM GKST++RQVG+ +++AQ+GSFVP + +
Sbjct: 594 EKLMESDKFIPNDTHLDYPETSIAIITGPNMAGKSTYLRQVGLLVILAQMGSFVPASKMT 653
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
+ V D +F RVGA D +G STF+ EM+ETA+IL AT SLI++DE+GRGTST+DG
Sbjct: 654 LPVFDRVFTRVGASDNLAQGQSTFLVEMIETANILHSATSNSLILLDEIGRGTSTFDGLS 713
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
LAWAI E++ + + TLFATH+HELT L + + + NY+V+ + + +
Sbjct: 714 LAWAIIEYIQKYKHSLTLFATHYHELTELENLYPD---------IKNYNVA--VKQWNEE 762
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
+ + K+E G DQS+GI VA A PE V+ A+E LE+
Sbjct: 763 MIFIRKIERGGADQSYGIQVARLAGIPEKVIRRAKEILKNLEE 805
>gi|418616725|ref|ZP_13179649.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU120]
gi|374820803|gb|EHR84879.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU120]
Length = 873
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 203/583 (34%), Positives = 314/583 (53%), Gaps = 61/583 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYGKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---------DLDQ 454
+P+I++ L + Q ++ KE L+PL+ L + ++E S+ D
Sbjct: 359 IPHIKALLNELGAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+NG ++ D L A KN + L ++T K+LK+ FG+
Sbjct: 408 FKNG---FNAQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYF 457
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQK 569
IT+ + + + +T + +F +LK+ LG + + V EY
Sbjct: 458 IEITRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY----- 511
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL ++ + T++E + A ++SELD L SFA++A Y +P + V + LE
Sbjct: 512 ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLE 567
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 568 NSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 626
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPCD A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 627 VPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGT 686
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSA 807
STYDG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A
Sbjct: 687 STYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA 736
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ +L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 737 --NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|152976135|ref|YP_001375652.1| DNA mismatch repair protein MutS [Bacillus cytotoxicus NVH 391-98]
gi|189030697|sp|A7GR99.1|MUTS_BACCN RecName: Full=DNA mismatch repair protein MutS
gi|152024887|gb|ABS22657.1| DNA mismatch repair protein MutS [Bacillus cytotoxicus NVH 391-98]
Length = 895
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 199/608 (32%), Positives = 331/608 (54%), Gaps = 51/608 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y + +M++D + R L + E+ K SL L+++T TA MG R+L W+++PL+
Sbjct: 248 YYTNQFMKIDVHSKRNLELTETLRTKEKTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQK 306
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+I RL++V+ FV+D LR+DL++ LK + D+ERL + + +++L +S ++
Sbjct: 307 EKIEERLEMVETFVNDYFLREDLKEKLKEVYDLERLAGKVAYGSVNARDLLQLKRSLQQV 366
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P I A+ + +++ + E DP E+LT L++ S+ + +++G+ +
Sbjct: 367 PAILEAISLLDNSYAAKLIEG-ADPCEALT---------KLLDRSIQENPPLSVKDGD-I 415
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y+ L + ++ + I L K+ + ++ K+LK+ FG+ +TK
Sbjct: 416 IKDGYNEKLDEYRYISKNGKTWIAELEKR---EREITGIKSLKIGYNRIFGYYIEVTKAN 472
Query: 522 -----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
E + +K +T + +F +LK+ + E+ + +L +
Sbjct: 473 LSLLPEGRYERK--------QTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALR 524
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ F + LA ++SELDVL SFA ++ + +P + + +I ++ RHP V
Sbjct: 525 EEVKVFIPKLQHLAKVISELDVLQSFATVSEE--ERFVKPVLT--NKREIFIKDGRHPVV 580
Query: 637 E-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E D ++PNDC + F +ITGPNM GKST++RQ+ + +MAQ+G FVP A
Sbjct: 581 EKVLDGKLYVPNDCMMPENMDVF-LITGPNMSGKSTYMRQLALVTIMAQIGCFVPATEAI 639
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
+ V D IF R+GA D + G STFM EMLE + + A++RSLI+ DE+GRGTSTYDG
Sbjct: 640 LPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMA 699
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
LA AI EH+ ++I A TLF+TH+HELT L + + + N HVSA I+ K
Sbjct: 700 LAQAIIEHIHDQIGAKTLFSTHYHELTVLE---------ESLTHLKNVHVSA-IEEDG-K 748
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
+ L+K++ GA D+S+GIHVA+ A P+S++ A+E A+LE I+ + EV
Sbjct: 749 VVFLHKIQEGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEG---QEEITIPKRTEVKE 805
Query: 876 KRKRISDP 883
+ +R+ P
Sbjct: 806 QPERMQQP 813
>gi|70726618|ref|YP_253532.1| DNA mismatch repair protein MutS [Staphylococcus haemolyticus
JCSC1435]
gi|90109858|sp|Q4L5Z9.1|MUTS_STAHJ RecName: Full=DNA mismatch repair protein MutS
gi|68447342|dbj|BAE04926.1| DNA mismatch repair protein MutS [Staphylococcus haemolyticus
JCSC1435]
Length = 883
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 206/608 (33%), Positives = 320/608 (52%), Gaps = 60/608 (9%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y+ +M++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 242 YAAVDFMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLINK 300
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I RL IV++F++ R LR +L ++ DIERL+ + + +++L S +
Sbjct: 301 ERIEERLSIVESFMNHFIERDTLRGYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEI 360
Query: 405 PYIRSALQQYE----GQFSSLIKERYLDPLESLTD--DDHLNKFIALVETSVDLDQLENG 458
P I+S L+ QFSSL +PLE L +D L + E + +
Sbjct: 361 PNIKSLLESMNDVASNQFSSL------EPLEDLLQVLEDSL-----IEEPPISIKDGGLF 409
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ S D L A KN ++ L + ++T K+LK+ FG+ IT
Sbjct: 410 KQGFSKQLDEYLEASKNGKDWLAQLQAKERERTGI-------KSLKISFNKVFGYFIEIT 462
Query: 519 KKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
+ EP + +T + +F +LK+ D ++ + + +L R
Sbjct: 463 RANLQGFEPS-----KFGYHRKQTLSNAERFITDELKEKEDIILGAEDKAVDLEYQLFVR 517
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
+ + T++E + A ++SELD L SFA++A Y +P+ + D + LE SRHP
Sbjct: 518 LREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPEFS--DNKTLSLENSRHP 573
Query: 635 CVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE D+ +++PNDCKL + ++ +ITGPNM GKST++RQV + +MAQ+G++VPC++
Sbjct: 574 VVERVMDYNDYVPNDCKLDKD-NFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCNK 632
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTYDG
Sbjct: 633 AELPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDG 692
Query: 754 FGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
LA A+ E++ + A TLF+TH+HELT L E + + N HV+A D
Sbjct: 693 LALAQAMIEYVAQTSHAKTLFSTHYHELTTLDQE---------LPSLKNVHVAA--DEYQ 741
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR---------EKAAELEDFTPSAV 864
+L L+KV+ GA D S+GI VA+ AN P+ V+ A+ + ++ E+ + V
Sbjct: 742 GELIFLHKVKDGAVDDSYGIQVAKLANLPDEVINRAQVILDAFEQSQNTSDNEEHSNITV 801
Query: 865 ISDDAKIE 872
+ D A +E
Sbjct: 802 LKDSASVE 809
>gi|421837499|ref|ZP_16271662.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001627]
gi|409740345|gb|EKN40647.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001627]
Length = 932
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 323/592 (54%), Gaps = 59/592 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKEYLSNFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKK------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
TK E IRK+ + ++I E ++ K + +KL D K+ E ++
Sbjct: 476 TKANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFI 534
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+E ++R+ +TA ++S++D L S A +A Y +P+IN D +I++
Sbjct: 535 EENIDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILI 579
Query: 629 EGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
E RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GS
Sbjct: 580 EEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGS 639
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRG
Sbjct: 640 FVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRG 699
Query: 748 TSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TSTYDG +AW++ E++ + +R TLFATH+HELT L + GV NY V
Sbjct: 700 TSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSV 750
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
S + ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 751 S--VSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>gi|168184856|ref|ZP_02619520.1| DNA mismatch repair protein MutS [Clostridium botulinum Bf]
gi|237795209|ref|YP_002862761.1| DNA mismatch repair protein MutS [Clostridium botulinum Ba4 str.
657]
gi|259511163|sp|C3KX35.1|MUTS_CLOB6 RecName: Full=DNA mismatch repair protein MutS
gi|182672081|gb|EDT84042.1| DNA mismatch repair protein MutS [Clostridium botulinum Bf]
gi|229263070|gb|ACQ54103.1| DNA mismatch repair protein MutS [Clostridium botulinum Ba4 str.
657]
Length = 932
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 326/608 (53%), Gaps = 49/608 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKKYLSSFKSDLF-LNMEKCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ 577
TK + + ++I +T + ++ +LK++ ++ E+ + + +L ++
Sbjct: 476 TKANLNLVPE---GRYIRKQTLSNAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRD 532
Query: 578 TAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE 637
+ + A ++S++D L S A +A Y +P+IN D +I++E RHP VE
Sbjct: 533 FIEENIDRMQKTARIISDIDCLCSLATVA--LENNYIKPNINAKD--EILIEEGRHPVVE 588
Query: 638 -AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP +A+I
Sbjct: 589 KVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANI 648
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
S+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +
Sbjct: 649 SICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSI 708
Query: 757 AWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
AW++ E++ + +R TLFATH+HELT L + GV NY VS +
Sbjct: 709 AWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS--VSELEN 757
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--------DFTPSAVIS 866
++ L K+ G DQS+GI VA+ A P V+ A+E +E + TPS
Sbjct: 758 EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNITPSKEYK 817
Query: 867 DDAKIEVG 874
IEV
Sbjct: 818 SKDYIEVS 825
>gi|424834369|ref|ZP_18259080.1| DNA mismatch repair protein MutS [Clostridium sporogenes PA 3679]
gi|365978715|gb|EHN14784.1| DNA mismatch repair protein MutS [Clostridium sporogenes PA 3679]
Length = 932
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 333/620 (53%), Gaps = 45/620 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ L+ I DIER++ + + ++++ L S
Sbjct: 311 INKNPIEDRLNAVEELLNNISLQEDLKEDLRSIYDIERIVGKVACKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGE-Y 460
++PYI+ L ++ L E+ +D LE + + L ++ +D L E
Sbjct: 371 GKIPYIKEYLANFKSDLF-LNMEQNIDTLEDIHE--------LLDKSLLDSPSLSVKEGN 421
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ ITK
Sbjct: 422 IIKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEITKA 478
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ + ++I +T + ++ +LK++ ++ E+ + + +L ++
Sbjct: 479 NLSSVPE---GRYIRKQTLANAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRDFIE 535
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQ 639
+ + A ++S++D L S A +A Y +P+IN D +I+++ RHP VE
Sbjct: 536 ENIDRMQKTARIISDIDCLCSLATVA--LENNYIKPNINAKD--EILIQEGRHPVVEKVI 591
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
FI ND + ++ +ITGPNM GKST++RQV + LMAQ+GSFVP +A+IS+
Sbjct: 592 PKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITLMAQIGSFVPAKKANISIC 651
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +AW+
Sbjct: 652 DKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWS 711
Query: 760 ICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
+ E++ + +R TLFATH+HELT L + GV NY VS + ++
Sbjct: 712 VIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS--VSELENEIV 760
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--------DFTPSAVISDDA 869
L K+ G DQS+GI VA+ A P V+ A+E +E + PS +
Sbjct: 761 FLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGSNEENSLNIAPSKEYKNKD 820
Query: 870 KIEVGSKRKRISDPNDMSRG 889
IE + R +S N++ G
Sbjct: 821 YIE--ASRDTLSTKNNLESG 838
>gi|114566506|ref|YP_753660.1| DNA mismatch repair protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318429|sp|Q0AYB5.1|MUTS_SYNWW RecName: Full=DNA mismatch repair protein MutS
gi|114337441|gb|ABI68289.1| DNA mismatch repair protein MutS [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 859
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 245/836 (29%), Positives = 394/836 (47%), Gaps = 63/836 (7%)
Query: 34 AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD----ALSSVSVSKNMFETIA 89
A+ FF D+Y E+A ++ TA R G GS + SV + I
Sbjct: 21 AILFFRLGDFYEMFFEDARIASRELEIVLTA-RDGGAGSKIPMCGVPYHSVDNYLARLIN 79
Query: 90 RDLLLERTDHTLELYEGSGSNWRLV-KSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNF 148
R + + + E G R V + TPG + + + A N
Sbjct: 80 RGYKVAICEQVEDPREAKGIVKREVTRIVTPGTIIEEQLLDQAKNN---------FLAAV 130
Query: 149 RENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTL 208
E G+ Y+D++ L+E ++ + VES ++ + ECLL + +
Sbjct: 131 EEEPLCTGIAYIDISTGEFWLSEIAGENARSRVESEILRISPAECLLAGSGSLTGSWE-- 188
Query: 209 RDALTRCGVMLT---ERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALL 265
+ L + + LT E + + L+ L +L S+E + + A ++
Sbjct: 189 EEWLRQQNITLTVWDELPLSLERAESLL--LRQLQVASLESFG--LKSYSAGIKAAARII 244
Query: 266 SYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCT 325
++ E S +R YS D+++ +D + R L + + + + SL +++ + T
Sbjct: 245 AFLEETQKTSLQHIKSLRCYSSDNFLEMDFYSRRNLELTATLREGKREGSLLSILDESRT 304
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLE 385
A MGKRLL W++QPL + EI RLD V + +LR +L L RI+D+ERL +
Sbjct: 305 A-MGKRLLRRWIEQPLREAGEIEERLDAVDELKNTLSLRTELTPLLSRINDLERLGGKIG 363
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIAL 445
A + ++ L S + I+ ALQ + L+ L D L + AL
Sbjct: 364 ASVASPRDLLGLKSSLAVINDIKKALQPCRSEI-----------LQRLAAMDALEEVFAL 412
Query: 446 VETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
++ S++ + ++ GE +I + Y + L+ + + + + K
Sbjct: 413 IDASINDEAPLGIKEGE-LIKTGYKQEIDELRELSQEGSNWLVEFENREKQRTGI---KN 468
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
LK+ FG+ ITK + +T + +F + +LK+ ++ E
Sbjct: 469 LKVGFNKVFGYYIEITKSN----LSLAPADYHRKQTLVNSERFISDELKQYEEKILGSRE 524
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
+ + + ++ + + + A ++ LDVL A++A Y RP+I+ +
Sbjct: 525 RLYSLEYQEFIKIREALIPYLPRVMETAHAIAILDVLQGLAEVAYQ--NNYIRPEID--N 580
Query: 623 VGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
G I + RHP VE A F+PND +L R K+ F IITGPNMGGKSTF+RQ + +L
Sbjct: 581 SGKIRIRAGRHPVVEKALREARFVPNDLQLDRDKARFAIITGPNMGGKSTFMRQAALLVL 640
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+GSF+P + A I + D IF RVGA D G STFM EM+E A+IL A+D SL+I+
Sbjct: 641 MAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQSTFMVEMIEVANILNNASDNSLVIL 700
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DE+GRGTSTYDG +A A+ E+L+E R+ LFATH+H+LT LA +++ G+
Sbjct: 701 DEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHYHQLTRLA---------EKLPGII 751
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N VS + T + L KV PG D+S+G+HVA A PE ++ A + LE
Sbjct: 752 NLSVS--VKETGNTVVFLKKVLPGKADKSYGLHVARLAGLPEKLIIRAEDILQGLE 805
>gi|269926487|ref|YP_003323110.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790147|gb|ACZ42288.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 862
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 226/676 (33%), Positives = 345/676 (51%), Gaps = 69/676 (10%)
Query: 253 GFEIAPGAL---GALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLES 306
G + P AL GAL+ Y +SD + +R Y L ++M LD R L ++ES
Sbjct: 228 GLDSMPVALKSAGALVQY---ISDTNPAALSTLRPPSTYFLSNFMPLDDRTRRNLELIES 284
Query: 307 KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQD 366
T +K+ SL +++ T TA MG R+L W+ QPL+ I RL+ VQ FV + R+
Sbjct: 285 -TRGDKSLSLLAVLDHTSTA-MGARMLRNWINQPLISKESIENRLNRVQEFVAHSEARER 342
Query: 367 LRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY 426
+R+ LK++SD+ERL + L ++ +++ L S ++P + LQQ Q
Sbjct: 343 IREALKQVSDLERLANRLVQKTITPRELRSLALSLEKIPELVQILQQCNMQLQV------ 396
Query: 427 LDPLESLTDDDHLNKFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
S+ + H+ I ALV+ D + +I Y L L++ + ++ I
Sbjct: 397 -----SIHNFQHIVDLILSALVD---DPPAVRGSGTIIREGYSQELDRLRSASTNAKQWI 448
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
SL ++ + K L++ FG+ +T + + ++I +T +
Sbjct: 449 ASLERKEREATGI---KNLRIGYNKVFGYYIEVTNS----FKHLVPDRYIRKQTLVGAER 501
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI-QTAVTFSEIFKSLATMLSELDVLLSFA 603
F +LK+ E + +++L++ +I + A +IF S A ++E+D +S A
Sbjct: 502 FITPELKEYESLILNSQTEAETIEEQLLDELITRIAGEAGKIF-STARQIAEIDCYVSLA 560
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
+ A Y RP ++ DV I ++G RHP VE + F+PND L + I+TG
Sbjct: 561 EAA--VRHQYVRPIVSEDDV--IEIKGGRHPVVELRASEGFVPNDAFLDQETHQVLILTG 616
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST++RQV + LMAQ+GSFVP D A I + D IF RVGA D G STFM EM
Sbjct: 617 PNMAGKSTYLRQVALITLMAQIGSFVPADSARIGIVDRIFTRVGAQDDIASGQSTFMVEM 676
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHEL 781
ETA IL T +SL+I+DE+GRGTSTYDG +A A+ E+L RA TLFATH+HEL
Sbjct: 677 TETAYILAHCTPKSLVILDEIGRGTSTYDGMAIAQAVVEYLHNNTRTRARTLFATHYHEL 736
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T+L EF + V N+ + + + L KV PG D+S+GIHVA+ A
Sbjct: 737 TSL-----EEFLPR----VKNFRM--EVLEEGNDVVFLRKVVPGGADKSYGIHVAKLAGI 785
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFS 901
P+SV+ A+E ELE D+ ++ +P+D L+E +
Sbjct: 786 PKSVIRRAQELLKELEAQLKKEEEDDNPQLT-------FLNPDD---------GLLQELA 829
Query: 902 DMPLETMDLKEALERV 917
D+ +E+M EAL ++
Sbjct: 830 DLDVESMTPVEALTKL 845
>gi|242242579|ref|ZP_04797024.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
W23144]
gi|242234006|gb|EES36318.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
W23144]
Length = 877
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 316/580 (54%), Gaps = 55/580 (9%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 244 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 302
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 303 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 362
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEY 460
+P+I++ L + + Q ++ KE L+PL+ L + ++E S+ + +++G
Sbjct: 363 IPHIKALLNELDAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 411
Query: 461 M---ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
++ D L A KN + L ++T K+LK+ FG+ I
Sbjct: 412 FKKGFNTQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYFIEI 464
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELV 572
T+ + + + +T + +F +LK+ LG + + V EY EL
Sbjct: 465 TRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----ELF 518
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
++ + T++E + A ++SELD L SFA++A Y +P + V + LE SR
Sbjct: 519 VKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLENSR 574
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE D +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++VPC
Sbjct: 575 HPVVERVMDHNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPC 633
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
D A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTY
Sbjct: 634 DSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTY 693
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSAHID 810
DG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A +
Sbjct: 694 DGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLNCLKNVHVAA--N 741
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 742 EYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 781
>gi|416124306|ref|ZP_11595302.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
FRI909]
gi|319401416|gb|EFV89626.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
FRI909]
Length = 873
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 316/580 (54%), Gaps = 55/580 (9%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEY 460
+P+I++ L + + Q ++ KE L+PL+ L + ++E S+ + +++G
Sbjct: 359 IPHIKALLNELDAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 461 M---ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
++ D L A KN + L ++T K+LK+ FG+ I
Sbjct: 408 FKKGFNTQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYFIEI 460
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELV 572
T+ + + + +T + +F +LK+ LG + + V EY EL
Sbjct: 461 TRANLNNFQPE-AFGYDRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----ELF 514
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
++ + T++E + A ++SELD L SFA++A Y +P + V + LE SR
Sbjct: 515 VKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLENSR 570
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE D +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++VPC
Sbjct: 571 HPVVERVMDHNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPC 629
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
D A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTY
Sbjct: 630 DSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTY 689
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSAHID 810
DG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A +
Sbjct: 690 DGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLNCLKNVHVAA--N 737
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 738 EYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|418630382|ref|ZP_13192864.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU128]
gi|420174935|ref|ZP_14681381.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM061]
gi|420191656|ref|ZP_14697567.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM023]
gi|374837923|gb|EHS01481.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU128]
gi|394244468|gb|EJD89810.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM061]
gi|394265807|gb|EJE10454.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM023]
Length = 873
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 316/580 (54%), Gaps = 55/580 (9%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEY 460
+P+I++ L + + Q ++ KE L+PL+ L + ++E S+ + +++G
Sbjct: 359 IPHIKALLNELDAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 461 M---ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
++ D L A KN + L ++T K+LK+ FG+ I
Sbjct: 408 FKKGFNTQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYFIEI 460
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELV 572
T+ + + + +T + +F +LK+ LG + + V EY EL
Sbjct: 461 TRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----ELF 514
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
++ + T++E + A ++SELD L SFA++A Y +P + V + LE SR
Sbjct: 515 VKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLENSR 570
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE D +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++VPC
Sbjct: 571 HPVVERVMDHNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPC 629
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
D A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTY
Sbjct: 630 DSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTY 689
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSAHID 810
DG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A +
Sbjct: 690 DGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLNCLKNVHVAA--N 737
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 738 EYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|418615557|ref|ZP_13178499.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU118]
gi|374816996|gb|EHR81187.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU118]
Length = 873
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 316/580 (54%), Gaps = 55/580 (9%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEY 460
+P+I++ L + + Q ++ KE L+PL+ L + ++E S+ + +++G
Sbjct: 359 IPHIKALLNELDAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 461 M---ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
++ D L A KN + L ++T K+LK+ FG+ I
Sbjct: 408 FKKGFNTQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYFIEI 460
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELV 572
T+ + + + +T + +F +LK+ LG + + V EY EL
Sbjct: 461 TRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----ELF 514
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
++ + T++E + A ++SELD L SFA++A Y +P + V + LE SR
Sbjct: 515 VKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLENSR 570
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE D +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++VPC
Sbjct: 571 HPVVERVMDHNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPC 629
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
D A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTY
Sbjct: 630 DSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTY 689
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSAHID 810
DG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A +
Sbjct: 690 DGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLNCLKNVHVAA--N 737
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 738 EYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|420176862|ref|ZP_14683256.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM057]
gi|420179456|ref|ZP_14685747.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM053]
gi|394251769|gb|EJD96845.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM057]
gi|394253660|gb|EJD98656.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM053]
Length = 873
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 316/580 (54%), Gaps = 55/580 (9%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEY 460
+P+I++ L + + Q ++ KE L+PL+ L + ++E S+ + +++G
Sbjct: 359 IPHIKALLNELDAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 461 M---ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
++ D L A KN + L ++T K+LK+ FG+ I
Sbjct: 408 FKKGFNTQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYFIEI 460
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELV 572
T+ + + + +T + +F +LK+ LG + + V EY EL
Sbjct: 461 TRANLNNFQPE-AFGYDRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----ELF 514
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
++ + T++E + A ++SELD L SFA++A Y +P + V + LE SR
Sbjct: 515 VKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLENSR 570
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE D +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++VPC
Sbjct: 571 HPVVERVMDHNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPC 629
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
D A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTY
Sbjct: 630 DSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTY 689
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSAHID 810
DG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A +
Sbjct: 690 DGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLNCLKNVHVAA--N 737
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 738 EYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|153940053|ref|YP_001391055.1| DNA mismatch repair protein MutS [Clostridium botulinum F str.
Langeland]
gi|384462088|ref|YP_005674683.1| DNA mismatch repair protein MutS [Clostridium botulinum F str.
230613]
gi|189030763|sp|A7GE45.1|MUTS_CLOBL RecName: Full=DNA mismatch repair protein MutS
gi|152935949|gb|ABS41447.1| DNA mismatch repair protein MutS [Clostridium botulinum F str.
Langeland]
gi|295319105|gb|ADF99482.1| DNA mismatch repair protein MutS [Clostridium botulinum F str.
230613]
Length = 932
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 323/592 (54%), Gaps = 59/592 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKKYLSGFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKK------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
TK E IRK+ + ++I E ++ K + +KL D K+ E ++
Sbjct: 476 TKANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFI 534
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+E ++R+ +TA ++S++D L S A +A Y +P+IN D +I++
Sbjct: 535 EENIDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILI 579
Query: 629 EGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
E RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GS
Sbjct: 580 EEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGS 639
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRG
Sbjct: 640 FVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRG 699
Query: 748 TSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TSTYDG +AW++ E++ + +R TLFATH+HELT L + GV NY V
Sbjct: 700 TSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSV 750
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
S + ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 751 S--VSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>gi|148379759|ref|YP_001254300.1| DNA mismatch repair protein MutS [Clostridium botulinum A str. ATCC
3502]
gi|153930881|ref|YP_001384057.1| DNA mismatch repair protein MutS [Clostridium botulinum A str. ATCC
19397]
gi|189030760|sp|A7FUL0.1|MUTS_CLOB1 RecName: Full=DNA mismatch repair protein MutS
gi|229486458|sp|A5I2S2.1|MUTS_CLOBH RecName: Full=DNA mismatch repair protein MutS
gi|148289243|emb|CAL83339.1| DNA mismatch repair protein [Clostridium botulinum A str. ATCC
3502]
gi|152926925|gb|ABS32425.1| DNA mismatch repair protein MutS [Clostridium botulinum A str. ATCC
19397]
Length = 932
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 322/592 (54%), Gaps = 59/592 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL +++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWALDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKEYLSNFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKK------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
TK E IRK+ + ++I E ++ K + +KL D K+ E ++
Sbjct: 476 TKANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFI 534
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+E ++R+ +TA ++S++D L S A +A Y +P+IN D +I++
Sbjct: 535 EENIDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILI 579
Query: 629 EGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
E RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GS
Sbjct: 580 EEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGS 639
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRG
Sbjct: 640 FVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRG 699
Query: 748 TSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TSTYDG +AW++ E++ + +R TLFATH+HELT L + GV NY V
Sbjct: 700 TSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSV 750
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
S + ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 751 S--VSELENEIVFLRKIIKGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>gi|427407122|ref|ZP_18897327.1| DNA mismatch repair protein MutS [Selenomonas sp. F0473]
gi|425707597|gb|EKU70641.1| DNA mismatch repair protein MutS [Selenomonas sp. F0473]
Length = 870
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 217/650 (33%), Positives = 325/650 (50%), Gaps = 55/650 (8%)
Query: 291 MRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
M+LD+ +R L + S D K +LF +++ T T MG RLL WL+ PLL + I+AR
Sbjct: 263 MQLDTYTLRNLEITRSLRDGGKKNTLFDVLDFTRTP-MGTRLLKSWLEHPLLAPHRIDAR 321
Query: 351 LDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
LD V D ++LR LR+HL+ + D ERL+ +E + A + +V L S LP +R
Sbjct: 322 LDAVAELADASSLRGALREHLRSVYDFERLLTRIETQSANARDLVALRVSLAALPAVRET 381
Query: 411 LQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQL--ENGEYMISSSYDT 468
L S + R +E+ D L L+ VD L +G+ +I Y+
Sbjct: 382 L----AAARSRLLMRAAAGIETFDDLQGL-----LMRAIVDEPGLSVRDGD-IIRRGYNA 431
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKK 528
L L + + + ++ + K LK+ FG+ + ++
Sbjct: 432 ELDELHRFSHDSKSLLQEMEERERERTGI---KTLKIGYNKVFGYYIEVRHSGSDRV--- 485
Query: 529 LTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
+I +T + +F +LK+ LG Q + EY + EL +RV + V
Sbjct: 486 -PADYIRKQTLANAERFITEELKEFETKILGAQEKITALEY-HLFTELRDRVKERLVPIQ 543
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE---AQD 640
+ +++A +DVL S A+ A+S Y RP I P G+I+++ RHP VE +D
Sbjct: 544 AVARTIA----RVDVLQSMAEAAASYR--YVRPVIRPASDGEIVIKDGRHPLVERLLGRD 597
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
F+PND L G + +ITGPNM GKST++RQV + LMAQVGSFVP A I+ D
Sbjct: 598 I--FVPNDTHLSHGGTETMLITGPNMAGKSTYMRQVALLTLMAQVGSFVPARSAEIAPVD 655
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
IF R+GA D + G STFM EM E A IL+ AT SL+I+DE+GRGTST+DG +A A+
Sbjct: 656 RIFTRIGASDDLVSGQSTFMVEMNEVAQILREATRDSLVILDEIGRGTSTFDGMSIARAV 715
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
EH+ I A TLFATH+HELT +A+E + NY ++ + R++ L
Sbjct: 716 VEHIDARIHAKTLFATHYHELTEMANER-----------IRNYCIA--VREKGRRVVFLR 762
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRI 880
++ GA D+S+GIHVA A P V E+A E+ + A G +
Sbjct: 763 RIVAGAADKSYGIHVARLAGLPPKVT----ERAEEILHTLEQCAVGQRAAAAAGQPEPDM 818
Query: 881 SD-PNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAG 929
P + + L+E + + TM EA+ + R+++ K+AG
Sbjct: 819 PPAPEEPGMASLFEGGMLEELRGLDVMTMTPLEAMNTLYRLQEQARKEAG 868
>gi|403386461|ref|ZP_10928518.1| DNA mismatch repair protein MutS [Clostridium sp. JC122]
Length = 890
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 318/584 (54%), Gaps = 43/584 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I Y+++ Y+ +D ++ R L + ES D NK SL ++++T TA MG R L W+ QPL
Sbjct: 250 IESYNINDYLVIDGSSRRNLEITESLRDKNKKGSLLWVLDKTSTA-MGGRRLRNWVDQPL 308
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D +I R D ++ V + + +DL+ LK + DIERL+ + + ++++ L S
Sbjct: 309 VDKEKIVLRQDAIEELVKNISKEEDLKDALKEVYDIERLVGKISSKSINAKELISLKNSI 368
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P I+ L ++ S+L+ L+ L + D L +++ S+ + ++ G
Sbjct: 369 EKIPTIKQVLTNFK---SNLL-------LKVLNELDDLKDIYEILDKSITDNPAISVKEG 418
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I +D + +N + ++ I +L + + ++LK+ FG+ IT
Sbjct: 419 N-IIKDGFDERIDDFRNSKRCGKQWIANLESTEKEETGI---RSLKVGYNKVFGYYIEIT 474
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K + + ++I +T + +F +LK++ ++ ++ + + E+ +
Sbjct: 475 KANLALVPE---GRYIRKQTLSNAERFITPELKEMEEKILGAEDKLMSLEYEIFVDIRDM 531
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ K + ++SELD L S A +A Y +P+IN G + +E RHP VE
Sbjct: 532 VENHVDRMKISSKLISELDCLCSLARVARE--NGYIKPNINTK--GILKIEDGRHPVVEK 587
Query: 639 QDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
VN F+ ND KL + +ITGPNM GKST++RQV + LMAQ+GSFVP A IS
Sbjct: 588 MLDVNEFVANDTKLDTKNNQLLLITGPNMAGKSTYMRQVALITLMAQIGSFVPAKFADIS 647
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
+ D IF R+GA D G STFM EM E ++IL+ AT++SLI++DE+GRGTSTYDG +A
Sbjct: 648 ICDKIFTRIGASDDLAGGKSTFMVEMWEVSNILRNATNKSLILLDEVGRGTSTYDGLSIA 707
Query: 758 WAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMV-GVANYHVSA-HIDSTS 813
W++ E++ + ++ TLFATH+HELT L + MV GV NY ++ ID++
Sbjct: 708 WSVIEYICKNSNMKCKTLFATHYHELTKL----------EGMVEGVRNYSIAVKEIDNS- 756
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G D+S+GI VA+ A PE V+ ARE +LE
Sbjct: 757 --IIFLRKIIEGGADESYGIEVAKLAGIPEIVIDRAREILCKLE 798
>gi|345858097|ref|ZP_08810510.1| DNA mismatch repair protein MutS [Desulfosporosinus sp. OT]
gi|344328902|gb|EGW40267.1| DNA mismatch repair protein MutS [Desulfosporosinus sp. OT]
Length = 850
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 232/774 (29%), Positives = 372/774 (48%), Gaps = 65/774 (8%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
GL ++DL+ G S F + + L + E LLP E +K +
Sbjct: 133 GLAFLDLST---GEFSIFQTSDFEVLLAELSRINPAELLLPPELMKRPK--------PWV 181
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYA-ELLSDE 274
G + R++ F Q+L G +DL F +A A AL +Y E +
Sbjct: 182 GYYCSVRERKTFGG----QELQNRFSGQ----QDLFLEFPVATQAATALWTYLLETMPGV 233
Query: 275 SNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
I+ + + +M LD L + ES K +L +++ T TA G RLL
Sbjct: 234 DPTHIIEIKTFRSEQWMFLDQWTRHNLELTESLRSVGKRGTLLSVLDLTQTA-FGGRLLK 292
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQI 394
W+ +PLL +EI RL+ ++ D+ LR+DL + L + D+ERLM + A + +
Sbjct: 293 HWIDKPLLSQDEIERRLNAIEELTSDSFLRKDLFKLLSEVYDLERLMGKVSYGTANAKDL 352
Query: 395 VKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ 454
+ L Q+ LP IR+ + + + I +L+ L+S ++K + + + L
Sbjct: 353 LSLAQTLALLPEIRTLITASSAE-TLKIHAPHLEGLDSF-----VSKLQSALNPTPPLS- 405
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
L +G +I + Y + L+ + + L + ++LK+ FG+
Sbjct: 406 LRDGN-IIKTGYSQEVDELRYIASGGKEWVAQLENAERERTGI---RSLKIGYNKVFGYF 461
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
IT I T + +T + +F +LK+ + E+ K+ + EL+
Sbjct: 462 IEITHANAHLI----PTDYQRKQTLSNAERFITPELKEYEQKIIGAEEKLKDLEYELLLA 517
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
+ + T ++ +A +L+E+DV +S A++A Y RP I G+I++ RHP
Sbjct: 518 LREDVRTHTKAILQVAQVLAEVDVFVSLAEVA--VRNHYVRPQIK--HNGEIVIIEGRHP 573
Query: 635 CVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE + F+PND ++ +ITGPNM GKST++RQV + +LMA +GSFVP +
Sbjct: 574 VVEQMLEPGVFVPNDTQMSESHH-LALITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKK 632
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
ASI+ D IF RVGA D G STFM EM E A IL+ AT +SLII+DE+GRGT+T+DG
Sbjct: 633 ASIAQVDRIFTRVGASDDLAAGQSTFMVEMQEVAHILRYATSKSLIILDEIGRGTATFDG 692
Query: 754 FGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
+AWA+ EHL++ TLFATH+HELT L E F N HV +
Sbjct: 693 LSIAWAVAEHLIQSQGFNPKTLFATHYHELTQLQDEFPRLF---------NLHVG--VKE 741
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKI 871
+ L+K+ PG D+S+GI VA A P ++ A+ ELE P ++D +
Sbjct: 742 RGEDIVFLHKILPGKADRSYGIQVARLAGLPPELLQRAKTLLIELESSEPVHAVADPST- 800
Query: 872 EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLE 925
V ++ P + H L+E + +PLE M ++AL+ + +++ ++
Sbjct: 801 -VVTQFSLFDVP--------QTHPLLQEINQLPLEDMTARQALQYLFDLRERIQ 845
>gi|332982487|ref|YP_004463928.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
gi|332700165|gb|AEE97106.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
Length = 882
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 209/618 (33%), Positives = 320/618 (51%), Gaps = 52/618 (8%)
Query: 247 VRDLVSGFEI--APGALGALLSYAELLSDE----SNYGNYYIRKYSLDSYMRLDSAAMRA 300
V D VS E+ A AL +L+SY L+ + +N G I Y + YM LD+A R
Sbjct: 220 VLDYVSKEEMPQAVCALASLISY--LIETQKTALANIGG--IEVYHIQQYMILDAATRRN 275
Query: 301 LNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDD 360
L + E+ + +L +++ T TA MG R+L W++QPLL++N +N R + V+A +
Sbjct: 276 LELCETMRSGSHKGTLMWVLDHTSTA-MGGRMLKSWIEQPLLNINALNERQEAVEAMANQ 334
Query: 361 TALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS-ALQQYEGQFS 419
+ D+++ L I DIERLM + ++ L QS RLP + ALQ +
Sbjct: 335 PLWKDDIKEALSGIYDIERLMSKAVYGNINARDLIALKQSLGRLPRLNELALQGKAARLK 394
Query: 420 SLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNE 476
+L +R D ++ L++ ++ D +++G +I YD + L++
Sbjct: 395 TL-GQRI----------DVMDDIYTLIDKAIADDPPLSVKDGN-IIKDGYDQSVDELRDI 442
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ + I L +Q + D K+LK+ FG+ +TK + +I
Sbjct: 443 SHNGRQWISRLEQQ---ERDRTGIKSLKVGYNKVFGYYIEVTKS----YYDMVPADYIRK 495
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
+T + ++ +LK++ ++ E + ++ + T V + + A+ ++EL
Sbjct: 496 QTLANAERYITPELKEMENKILSASERLVALEYQIFADIRDTVVGHIKRVQQTASAIAEL 555
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGK 655
D L S AD ++ Y RP +N I+++ RHP VE F+PND L G+
Sbjct: 556 DCLCSLAD--AAIENHYVRPVLNEGQ--RIVIQNGRHPVVEKVLPPHTFVPNDTLLDNGE 611
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
IITGPNM GKST++RQV + +LMAQ+GSFVP D A I + D IF RVGA D G
Sbjct: 612 DMVCIITGPNMAGKSTYMRQVALIVLMAQIGSFVPADMAEIGIVDRIFTRVGASDDLSTG 671
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTL 773
STFM EM E A IL AT +SL+I+DE+GRGTST+DG +AWA+ E++ + R A TL
Sbjct: 672 QSTFMVEMTEVAHILHNATAKSLLILDEIGRGTSTFDGLSIAWAVIEYVADPGRLGAKTL 731
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATH+HELT L ++ GV NY++S + + L K+ G +SFGI
Sbjct: 732 FATHYHELTEL---------EGRLTGVKNYYIS--VREHGDDVIFLRKIMRGGSGRSFGI 780
Query: 834 HVAEFANFPESVVTLARE 851
VA A P+ V+ ARE
Sbjct: 781 QVARLAGLPQDVIDRARE 798
>gi|418634041|ref|ZP_13196439.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU129]
gi|420189481|ref|ZP_14695455.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM037]
gi|420204218|ref|ZP_14709778.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM015]
gi|374838033|gb|EHS01590.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU129]
gi|394262031|gb|EJE06816.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM037]
gi|394274232|gb|EJE18657.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
NIHLM015]
Length = 873
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 316/580 (54%), Gaps = 55/580 (9%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEY 460
+P+I++ L + + Q ++ KE L+PL+ L + ++E S+ + +++G
Sbjct: 359 IPHIKALLNELDAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 461 M---ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
++ D L A KN + L ++T K+LK+ FG+ I
Sbjct: 408 FKKGFNTQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYFIEI 460
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELV 572
T+ + + + +T + +F +LK+ LG + + V EY EL
Sbjct: 461 TRANLNNFQPE-AFGYDRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----ELF 514
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
++ + T++E + A ++SELD L SFA++A Y +P + V + LE SR
Sbjct: 515 VKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLENSR 570
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE D +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++VPC
Sbjct: 571 HPVVERVMDHNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPC 629
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
D A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTY
Sbjct: 630 DSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTY 689
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSAHID 810
DG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A +
Sbjct: 690 DGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLKCLKNVHVAA--N 737
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 738 EYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|365154967|ref|ZP_09351363.1| DNA mismatch repair protein mutS [Bacillus smithii 7_3_47FAA]
gi|363628892|gb|EHL79593.1| DNA mismatch repair protein mutS [Bacillus smithii 7_3_47FAA]
Length = 872
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 198/582 (34%), Positives = 313/582 (53%), Gaps = 42/582 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ Y + +YM++D + R L + E+ K SL L++ T TA MG RLL W+ +PL
Sbjct: 244 VETYHVHNYMKIDYFSKRNLELTETIRSKGKKGSLLWLLDETMTA-MGARLLKQWIDRPL 302
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ ++I RL +V+ ++ RQ+LR+ LK + D+ERL + + +++L +S
Sbjct: 303 IQKSKIEKRLALVELLLNRYFERQELRERLKEVYDLERLAGRVAFGNVNARDLIQLKKSL 362
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
++P ++ L Q + I + LDP E L D L + A+VE L E G +
Sbjct: 363 QQIPSLKDLLGQMDNDDIQTIASK-LDPCEELID--LLER--AIVENP-PLSVKEGG--I 414
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK- 520
I Y L ++ ++ ++ I L K+ + K+LK+ FG+ +TK
Sbjct: 415 IKDGYHAELDRYRDASQNGKKWIAQLEKEERERTGI---KSLKVGYNRVFGYYIEVTKAN 471
Query: 521 ----EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
EE + +K +T + +F +LK+ + E+ + + E+ +
Sbjct: 472 LHLLEEGRYERK--------QTLANAERFITPELKEKEALILQAEEKSVDLEYEIFLSIR 523
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ TF ++LA +SELD L FA ++ Y +P N D + ++G RHP V
Sbjct: 524 EYVKTFIPRLQALAKTVSELDCLQCFATVSEK--QHYVKPRFN--DGRTLRIKGGRHPVV 579
Query: 637 E-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E D ++ NDC + +G+ +ITGPNM GKST++RQ+ + ++AQ+G FVP + A
Sbjct: 580 EKVMDSQMYVANDCLMDKGREML-LITGPNMSGKSTYMRQIALTAILAQIGCFVPAEEAV 638
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
+ + D +F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTSTYDG
Sbjct: 639 LPIFDQVFTRIGASDDLISGQSTFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMA 698
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
LA AI E++ + I A TLF+TH+HELT L K++ + N HVSA + K
Sbjct: 699 LAQAIIEYIHDHIGAKTLFSTHYHELTVLE---------KELDQLKNVHVSAV--EQNGK 747
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
L L+KV+ GA D+S+GIHVAE AN P++++ A+E +LE
Sbjct: 748 LVFLHKVKEGAADKSYGIHVAELANLPQTLIKRAKEILTDLE 789
>gi|293115594|ref|ZP_05792223.2| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
gi|292808993|gb|EFF68198.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
Length = 900
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 224/693 (32%), Positives = 356/693 (51%), Gaps = 57/693 (8%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIR--KYSLDSYMRLDSAAMRALNVLESKT 308
+S ++ A A GALL+Y L + N + R Y+ YM +DS+ R L ++E+
Sbjct: 244 ISDYKTAVVAAGALLNY--LYETQKNSLPHLTRITPYATGRYMIIDSSTRRNLELVETMR 301
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
+ K SL ++++T TA MG RLL ++QPLL ++I AR V F+++ +LR
Sbjct: 302 EKQKKGSLLWVLDKTKTA-MGARLLRNMIEQPLLIKDDIVARQKAVTEFINNYVDCAELR 360
Query: 369 QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY-- 426
++L + D+ERL+ + + A + ++ S LP I+ L ++ SSLIK Y
Sbjct: 361 EYLNPVYDLERLVGRISTKSASPRDLIAFKGSIAMLPPIKKLLASFK---SSLIKSIYEE 417
Query: 427 LDPLESLTDDDHLNKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLER 482
LD LE + +L+E S+ +D+ +++G +I Y+ + L++ + ++
Sbjct: 418 LDVLEDIC---------SLIEASI-VDEPPIAIKDGG-LIKEGYNEEIDRLRHAKTDGKQ 466
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
+ +L AS+ + K LK+ FG+ F +T + + +I +T +
Sbjct: 467 WLLNLE---ASEKERTGIKNLKIKYNKVFGYYFEVTNS----FKNMVPDDYIRKQTLTNA 519
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
+FT KLK+L + ++ + + +L V ++ A +++ DV +
Sbjct: 520 ERFTTLKLKELEEVILSAEDKLFSLEYDLFTEVRDRIAGEVLRIQTTAKAVAKADVFSNL 579
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQII 661
A +A Y P IN + G I +EG RHP VE F+ ND L K+ II
Sbjct: 580 AIVAMQ--NNYVCPTIN--EKGLIEIEGGRHPVVEKMISNGLFVENDTILDNHKNRISII 635
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST++RQ + +LMAQ+GS++P +A+I + D IF RVGA D G STFM
Sbjct: 636 TGPNMAGKSTYMRQTALIVLMAQIGSYIPATKANIGIVDRIFTRVGASDDLASGQSTFMV 695
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFH 779
EM E A+IL+ AT SL+I+DE+GRGTST+DG +AWA+ EH+ + A TLFATH+H
Sbjct: 696 EMTEVANILRNATSDSLLILDEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYH 755
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
ELT L QM V NY ++ + + L K+ G D+S+GI VA+ A
Sbjct: 756 ELTELEG---------QMESVNNYCIA--VKEQGDDIIFLRKIVKGGADKSYGIQVAKLA 804
Query: 840 NFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSR-------GAAR 892
P SV+ A+E AEL D SA + A++ + + +I D + A
Sbjct: 805 GVPSSVIERAKEIVAELADNDISAKAKEIARLGISKEALKIPDSVGKDKYVQMSLFDAVN 864
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMKDDLE 925
+ E D+ L M +AL + R++D ++
Sbjct: 865 NDDIIDEIKDLELTKMTPIDALNTLFRIQDKIK 897
>gi|337294298|emb|CCB92281.1| DNA mismatch repair protein mutS [Waddlia chondrophila 2032/99]
Length = 842
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 222/645 (34%), Positives = 324/645 (50%), Gaps = 52/645 (8%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESK 307
+ G A GALL Y L D N +I YS + YM LD L + S
Sbjct: 227 LKGMAAGINASGALLHY---LRDTLNLSIDHINTISTYSTNEYMTLDRMTQTNLELTRSL 283
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
D + +L ++++TCT MG RL+ WLK+PLL + I AR D VQ+F++ L
Sbjct: 284 QDGTRKHTLLSILDQTCTP-MGGRLILQWLKRPLLCMKTIQARQDAVQSFIERDWTHDQL 342
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK--ER 425
+ L+ + DIERLM + A + I L S L I+S L++ SSLI+ E+
Sbjct: 343 KASLEDVRDIERLMMKVSANYASPKDIAALRHSIEPLGKIKSLLRE-PAAASSLIQTHEK 401
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
L+PL L IA +L +G + + L ++ + + ++
Sbjct: 402 QLNPLPELIS------LIANALVDEPPQKLSDGN-IFRKGFHQELDEIREISANSKSWLN 454
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+ + +LD+ K LK+ FG+ ++K + K+ + E R+ V
Sbjct: 455 NYQNKLREELDI---KNLKVGFNRMFGYYIEVSKGQAGKVPESF-------ERRQTLVNA 504
Query: 546 TNTKLKKLGDQYQKVL---EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
K L + QKVL E+ + ++EL ++ +++I A L+ +D L +
Sbjct: 505 ERFITKDLKEYEQKVLTAEEKISSIEQELFQQLRTEVTRYADIVIKTAQSLAIIDCLQAL 564
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW-VNFIPNDCKLIRGKSWFQII 661
A+ A Y RP+I+ +I EG RHP +EA + F+PND L + +I
Sbjct: 565 AEAARLHG--YQRPEIDQSQRLEIT-EG-RHPVIEAVNMNEKFVPNDTLLDDENNRLLLI 620
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST+IRQV + +MAQ+GSFVP A I + D +F R+GA D RG STFM
Sbjct: 621 TGPNMAGKSTYIRQVALITIMAQIGSFVPAKTAHIGLVDKVFTRIGASDDLSRGQSTFMV 680
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFH 779
EM ETA+IL ATDRSL+I+DE+GRGTSTYDG +AW++ E L+ E A TLFATH+
Sbjct: 681 EMTETANILNNATDRSLVILDEIGRGTSTYDGISIAWSVAEFLLTEEGSTARTLFATHYC 740
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
ELT L +++ G NY+V+ H S + L K+ G D+S+GIHVA A
Sbjct: 741 ELTKLE---------EKIPGAVNYNVAVHESEDS--IIFLRKIVKGGTDKSYGIHVARLA 789
Query: 840 NFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPN 884
P V+ A+E LE+ + +K KRK + PN
Sbjct: 790 GLPLPVIERAKEILIHLEENANRKSTFEPSK----PKRKAKARPN 830
>gi|297621573|ref|YP_003709710.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
gi|297376874|gb|ADI38704.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
Length = 841
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 222/645 (34%), Positives = 324/645 (50%), Gaps = 52/645 (8%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESK 307
+ G A GALL Y L D N +I YS + YM LD L + S
Sbjct: 226 LKGMAAGINASGALLHY---LRDTLNLSIDHINTISTYSTNEYMTLDRMTQTNLELTRSL 282
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
D + +L ++++TCT MG RL+ WLK+PLL + I AR D VQ+F++ L
Sbjct: 283 QDGTRKHTLLSILDQTCTP-MGGRLILQWLKRPLLCMKTIQARQDAVQSFIERDWTHDQL 341
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK--ER 425
+ L+ + DIERLM + A + I L S L I+S L++ SSLI+ E+
Sbjct: 342 KASLEDVRDIERLMMKVSANYASPKDIAALRHSIEPLGKIKSLLRE-PAAASSLIQTHEK 400
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
L+PL L IA +L +G + + L ++ + + ++
Sbjct: 401 QLNPLPELIS------LIANALVDEPPQKLSDGN-IFRKGFHQELDEIREISANSKSWLN 453
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+ + +LD+ K LK+ FG+ ++K + K+ + E R+ V
Sbjct: 454 NYQNKLREELDI---KNLKVGFNRMFGYYIEVSKGQAGKVPESF-------ERRQTLVNA 503
Query: 546 TNTKLKKLGDQYQKVL---EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
K L + QKVL E+ + ++EL ++ +++I A L+ +D L +
Sbjct: 504 ERFITKDLKEYEQKVLTAEEKISSIEQELFQQLRTEVTRYADIVIKTAQSLAIIDCLQAL 563
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW-VNFIPNDCKLIRGKSWFQII 661
A+ A Y RP+I+ +I EG RHP +EA + F+PND L + +I
Sbjct: 564 AEAARLHG--YQRPEIDQSQRLEIT-EG-RHPVIEAVNMNEKFVPNDTLLDDENNRLLLI 619
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST+IRQV + +MAQ+GSFVP A I + D +F R+GA D RG STFM
Sbjct: 620 TGPNMAGKSTYIRQVALITIMAQIGSFVPAKTAHIGLVDKVFTRIGASDDLSRGQSTFMV 679
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFH 779
EM ETA+IL ATDRSL+I+DE+GRGTSTYDG +AW++ E L+ E A TLFATH+
Sbjct: 680 EMTETANILNNATDRSLVILDEIGRGTSTYDGISIAWSVAEFLLTEEGSTARTLFATHYC 739
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
ELT L +++ G NY+V+ H S + L K+ G D+S+GIHVA A
Sbjct: 740 ELTKLE---------EKIPGAVNYNVAVHESEDS--IIFLRKIVKGGTDKSYGIHVARLA 788
Query: 840 NFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPN 884
P V+ A+E LE+ + +K KRK + PN
Sbjct: 789 GLPLPVIERAKEILIHLEENANRKSTFEPSK----PKRKAKARPN 829
>gi|254975573|ref|ZP_05272045.1| DNA mismatch repair protein [Clostridium difficile QCD-66c26]
gi|255092961|ref|ZP_05322439.1| DNA mismatch repair protein [Clostridium difficile CIP 107932]
gi|255314702|ref|ZP_05356285.1| DNA mismatch repair protein [Clostridium difficile QCD-76w55]
gi|255517377|ref|ZP_05385053.1| DNA mismatch repair protein [Clostridium difficile QCD-97b34]
gi|255650483|ref|ZP_05397385.1| DNA mismatch repair protein [Clostridium difficile QCD-37x79]
gi|260683593|ref|YP_003214878.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260687253|ref|YP_003218387.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|384361214|ref|YP_006199066.1| DNA mismatch repair protein mutS [Clostridium difficile BI1]
gi|400927376|ref|YP_001088483.2| DNA mismatch repair protein MutS [Clostridium difficile 630]
gi|423089220|ref|ZP_17077582.1| DNA mismatch repair protein MutS [Clostridium difficile
70-100-2010]
gi|347595678|sp|Q187T6.2|MUTS_CLOD6 RecName: Full=DNA mismatch repair protein MutS
gi|260209756|emb|CBA63548.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260213270|emb|CBE04805.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|328887644|emb|CAJ68852.2| DNA mismatch repair protein MutS [Clostridium difficile 630]
gi|357558356|gb|EHJ39850.1| DNA mismatch repair protein MutS [Clostridium difficile
70-100-2010]
Length = 947
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 307/572 (53%), Gaps = 36/572 (6%)
Query: 290 YMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
YM LD L + ++ K SL ++++T TA MG RLL ++++PL++ ++I
Sbjct: 264 YMVLDMFTRTNLELTQTIRGNKKKGSLLHVLDKTSTA-MGGRLLRKYVEEPLINKSKIEN 322
Query: 350 RLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS 409
RLD+++ DD LR+DL LK I DIER+ + R ++++ L S +LP ++
Sbjct: 323 RLDVIEEIKDDFILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSIEKLPNLKD 382
Query: 410 ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
+ + ++KE Y+ ++ L D +L L E ++ +++G +I S +
Sbjct: 383 TINLSNAK---ILKE-YVSEMDKLDDIYNLIDEAILEEPTI---TIKDGN-IIKSDFSDE 434
Query: 470 LSALKNEQES---LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L L+ ++ L ++I + ++ K+LK+ FG+ ITK +
Sbjct: 435 LKELREISKNGAFLVKEIENREREKTGV------KSLKIGFNKVFGYYIEITKANFK--Q 486
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
KL +I +T + ++ +LK++ ++ E+ K+ + E+ + T +
Sbjct: 487 AKLDETYIRKQTLSNAERYITPELKEIEEKILHAEEKIKSLEYEIFVEIRDTIYKNIDRI 546
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFI 645
+ +A ++ +DV +S A +A Y +P IN + DI RHP VE NF+
Sbjct: 547 QKVAKTIANIDVFVSLATVAH--INNYVKPAINENNKLDI--RNGRHPVVENIVGEENFV 602
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
PND L RG++ IITGPNM GKST++RQ + LMA +GSFVP + A I + D IF R
Sbjct: 603 PNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAESADIPILDRIFTR 662
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D +G STFM EM E + ILK AT+RSL+I+DE+GRGTSTYDG LAW+I E++
Sbjct: 663 VGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVEYIQ 722
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+ IR TLFATH+HELT L E V NY ++ D + L K+ P
Sbjct: 723 KNIRCKTLFATHYHELTDLEEE---------FKEVKNYSIAVKEDGEG--IIFLRKIIPQ 771
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
D+S+GI+VA+ A P+ V+ A+ +LE
Sbjct: 772 GADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>gi|435852399|ref|YP_007313985.1| DNA mismatch repair protein MutS [Methanomethylovorans hollandica
DSM 15978]
gi|433663029|gb|AGB50455.1| DNA mismatch repair protein MutS [Methanomethylovorans hollandica
DSM 15978]
Length = 886
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 223/713 (31%), Positives = 363/713 (50%), Gaps = 51/713 (7%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
G+ ++D++ +F D+S F + S + + EC++P + L L
Sbjct: 139 GVSFLDVSTGEFMATQFSDESPFDRIASEVARMLPAECIVPLHLYGNEH---LMQRLEEL 195
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAP---GALGALLSYAELLS 272
V++ E + F T + + L + V + + G + P A GA L+YA + +
Sbjct: 196 KVIVHEFDEMAFDTTNAREHLKQ--HFGVSTLEGM--GCDTLPQAIAAAGAALNYA-ITT 250
Query: 273 DESNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKR 331
G+ + YS +M LDS +R L ++ + + SL ++++T T MG R
Sbjct: 251 QMRELGHVQSLSTYSESEFMILDSITLRNLEIVHNVRGEGNDTSLLKILDQTSTP-MGGR 309
Query: 332 LLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGL 391
+L WL +PL+ V+EIN RLD V+ T +R D+R HL + DIERL+ + +
Sbjct: 310 MLKKWLLKPLISVSEINERLDAVEELSGKTLVRFDVRSHLAYVKDIERLVGRVMYGNSNA 369
Query: 392 QQIVKLYQSSIRLPYIRSALQQYEGQFSS-LIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +V L S +P + +Q SS LI+ D +E L + LN + L+ ++
Sbjct: 370 RDLVALKLSMEAVPLL---IQCVGDDVSSRLIR----DIIEELQGFEELNSLVELIGKAI 422
Query: 451 ----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLD 506
L E G MI Y+T L LK+ + ++ + ++ + K+LK+
Sbjct: 423 AEEPPLSVREGG--MIRPGYNTELDKLKDLSHNGKKWVADFQQKERERTGI---KSLKVG 477
Query: 507 KGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKN 566
FG+ +T ++ +I +T + +F +LK++ E+
Sbjct: 478 YNRVFGYYLEVTSSNSSQV----PDDYIRKQTMVNAERFYTPELKEMETSILTADEKAHA 533
Query: 567 CQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI 626
+ EL+N V T ++S + A ++ + DVL++ A++A + RP + D +
Sbjct: 534 LEHELLNEVNATVASYSRQLQRAAFLIGQFDVLVNLAEVA--VHNNFIRPAVTS-DCRIL 590
Query: 627 ILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
I +G RHP VE+ F+PND ++ + F +ITGPNM GKST++RQ + ++MAQVG
Sbjct: 591 IRDG-RHPVVESTVPGGFVPNDTEIDCEDNQFLLITGPNMAGKSTYMRQTALIVIMAQVG 649
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
SFVP ASI + D +F RVGA D G STFM EM+E A+IL +T +SL+++DE+GR
Sbjct: 650 SFVPASHASIGIVDRVFTRVGAFDDLASGQSTFMVEMVELANILNNSTPKSLLLLDEIGR 709
Query: 747 GTSTYDGFGLAWAICE--HLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GTSTYDG+ +A A+ E H ++ ++FATH+H+LT L E K+ V N H
Sbjct: 710 GTSTYDGYSIAKAVVEYIHNKSKVGVRSMFATHYHQLTEL------EGTLKR---VKNLH 760
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ + L L K+ PGA D+S+GIHVA A P +V + A+E E+E
Sbjct: 761 IA--VKEEGDDLVFLRKIVPGATDRSYGIHVARLAGVPHAVTSRAKEVLREIE 811
>gi|255306973|ref|ZP_05351144.1| DNA mismatch repair protein [Clostridium difficile ATCC 43255]
Length = 947
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 307/572 (53%), Gaps = 36/572 (6%)
Query: 290 YMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
YM LD L + ++ K SL ++++T TA MG RLL ++++PL++ ++I
Sbjct: 264 YMVLDMFTRTNLELTQTIRGNKKKGSLLHVLDKTSTA-MGGRLLRKYVEEPLINKSKIEN 322
Query: 350 RLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS 409
RLD+++ DD LR+DL LK I DIER+ + R ++++ L S +LP ++
Sbjct: 323 RLDVIEEIKDDFILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSIEKLPNLKD 382
Query: 410 ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
+ + ++KE Y+ ++ L D +L L E ++ +++G +I S +
Sbjct: 383 TINLSNAK---ILKE-YVSEMDKLDDIYNLIDEAILEEPTI---TIKDGN-IIKSDFSDE 434
Query: 470 LSALKNEQES---LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L L+ ++ L ++I + ++ K+LK+ FG+ ITK +
Sbjct: 435 LKELREISKNGAFLVKEIENREREKTGV------KSLKIGFNKVFGYYIEITKANFK--Q 486
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
KL +I +T + ++ +LK++ ++ E+ K+ + E+ + T +
Sbjct: 487 AKLDETYIRKQTLSNAERYITPELKEIEEKILHAEEKIKSLEYEIFVEIRDTIYKNIDRI 546
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFI 645
+ +A ++ +DV +S A +A Y +P IN + DI RHP VE NF+
Sbjct: 547 QKVAKTIANIDVFVSLATVAH--INNYVKPAINENNKLDI--RNGRHPVVENIVGEENFV 602
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
PND L RG++ IITGPNM GKST++RQ + LMA +GSFVP + A I + D IF R
Sbjct: 603 PNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAESADIPILDRIFTR 662
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D +G STFM EM E + ILK AT+RSL+I+DE+GRGTSTYDG LAW+I E++
Sbjct: 663 VGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVEYIQ 722
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+ IR TLFATH+HELT L E V NY ++ D + L K+ P
Sbjct: 723 KNIRCKTLFATHYHELTDLEEE---------FKEVKNYSIAVKEDGEG--IIFLRKIIPQ 771
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
D+S+GI+VA+ A P+ V+ A+ +LE
Sbjct: 772 GADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>gi|168180373|ref|ZP_02615037.1| DNA mismatch repair protein MutS [Clostridium botulinum NCTC 2916]
gi|226949041|ref|YP_002804132.1| DNA mismatch repair protein MutS [Clostridium botulinum A2 str.
Kyoto]
gi|254766622|sp|C1FNT9.1|MUTS_CLOBJ RecName: Full=DNA mismatch repair protein MutS
gi|182668882|gb|EDT80860.1| DNA mismatch repair protein MutS [Clostridium botulinum NCTC 2916]
gi|226844101|gb|ACO86767.1| DNA mismatch repair protein MutS [Clostridium botulinum A2 str.
Kyoto]
Length = 932
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 323/592 (54%), Gaps = 59/592 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKKYLSGFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKK------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
TK E IRK+ + ++I E ++ K + +KL D K+ E ++
Sbjct: 476 TKANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFI 534
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+E ++R+ +TA ++S++D L S A +A Y +P+IN D +I++
Sbjct: 535 EENIDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILI 579
Query: 629 EGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
E RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GS
Sbjct: 580 EEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGS 639
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRG
Sbjct: 640 FVPAKKANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRG 699
Query: 748 TSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TSTYDG +AW++ E++ + +R TLFATH+HELT L + GV NY V
Sbjct: 700 TSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSV 750
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
S + ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 751 S--VSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>gi|418329388|ref|ZP_12940456.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
14.1.R1.SE]
gi|365230423|gb|EHM71518.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
14.1.R1.SE]
Length = 873
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 315/580 (54%), Gaps = 55/580 (9%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 240 EYAAVDYMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIN 298
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
IN RL+IV+ F+D R LR HL ++ DIERL+ + + +++L S
Sbjct: 299 KQHINDRLNIVEEFMDRFIERDTLRNHLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 358
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEY 460
+P+I++ L + + Q ++ KE L+PL+ L + ++E S+ + +++G
Sbjct: 359 IPHIKALLNELDAQTTTQFKE--LEPLDDL---------LQILEESLVEEPPISIKDGGL 407
Query: 461 M---ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
++ D L A KN + L ++T K+LK+ FG+ I
Sbjct: 408 FKKGFNTQLDEYLEASKNGKTWLAELQAKERERTGI-------KSLKISFNKVFGYFIEI 460
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELV 572
T+ + + + +T + +F +LK+ LG + + V EY EL
Sbjct: 461 TRANLNNFQPE-AFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----ELF 514
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
++ + T++E + A ++SELD L SFA++A Y +P + V + LE SR
Sbjct: 515 VKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYN--YVKPTFSDDKV--LHLENSR 570
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE D +++PNDC L +++ +ITGPNM GKST++RQV + +MAQ+G++VPC
Sbjct: 571 HPVVERVMDHNDYVPNDCHL-DDETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPC 629
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
D A++ + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTY
Sbjct: 630 DSATLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTY 689
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG-VANYHVSAHID 810
DG LA A+ E++ + A TLF+TH+HELT+L QM+ + N HV+A +
Sbjct: 690 DGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL----------DQMLNCLKNVHVAA--N 737
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 738 EYQGELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIDRAQ 777
>gi|121533677|ref|ZP_01665504.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
gi|121307668|gb|EAX48583.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
Length = 861
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 211/643 (32%), Positives = 335/643 (52%), Gaps = 68/643 (10%)
Query: 260 ALGALLSYA-ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
A+G LL Y + L + ++ N +R Y+ +M +D+AA+R L + + D + +L
Sbjct: 233 AVGHLLYYLHQTLKTDLSHVNRLMR-YNAAEFMTIDTAALRNLEITRNLRDGGRKDTLLS 291
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
+++ T TA MG RLL WL+ PLL V+EI R D V + + +RQ L++ L I D+E
Sbjct: 292 ILDFTQTA-MGGRLLKKWLEYPLLSVHEIIRRQDAVDELLTNPGVRQVLQEKLGHIYDLE 350
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
R++ E A + ++ L QS LP I+ +Q + I + +E+ D
Sbjct: 351 RIVTRAEVGTANGRDLIALKQSLSSLPTIKLHVQSMQSALLGEIGAK----METYED--- 403
Query: 439 LNKFIALVETSVDLDQLENGEY------MISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
+AL++ ++ ++N + +I + Y+ L L+ + ++ + + +
Sbjct: 404 ---IVALIDRAI----VDNPPHSVRDGGIIKTGYNQELDELREIAQDSQQWLMAFEAREK 456
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+ K+LK+ FG+ +T R + +++I +T ++ +LK+
Sbjct: 457 ERTGI---KSLKVGYNKVFGYYIEVTNAN----RAAVPSEYIRKQTLTSAERYITPELKE 509
Query: 553 -----LGDQYQKVLEEY------KNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
LG Q + V EY ++C K+ + R+ +TA L+ +D L+S
Sbjct: 510 FETKVLGAQEKIVQLEYYLFTIVRDCVKKHIPRLQETA-----------RQLAVIDCLVS 558
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQI 660
++ A+ Y RP I + +II+ RHP VE D F+PND +L I
Sbjct: 559 LSEAAARYN--YRRPAIT--NNREIIIRDGRHPVVERLLDREVFVPNDTELNHHDCEVMI 614
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQV + +LMAQVGSF+P A+I+ D IF RVGA D G STFM
Sbjct: 615 ITGPNMAGKSTYMRQVALLVLMAQVGSFIPAREAAITPVDRIFTRVGASDDLATGQSTFM 674
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
EM E A ILK AT SL+I+DE+GRGTST+DG +A A+ E++ + I+A TLFATH+HE
Sbjct: 675 VEMNEVAHILKHATTNSLVILDEIGRGTSTFDGMSIARAVIEYIKDRIKAKTLFATHYHE 734
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN 840
LT LA +Q G+ N+ V+ + ++ L ++ PG D+S+GIHVA A
Sbjct: 735 LTELA---------EQKKGIKNFTVA--VKERGSEVVFLRRIVPGGADKSYGIHVARLAG 783
Query: 841 FPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
P+ V+ A+ AELE + + V++ A + SDP
Sbjct: 784 LPKKVIERAQTILAELEQYAVAHVLAATALPAPQAHVSLFSDP 826
>gi|225850312|ref|YP_002730546.1| DNA mismatch repair protein MutS [Persephonella marina EX-H1]
gi|254766634|sp|C0QPF0.1|MUTS_PERMH RecName: Full=DNA mismatch repair protein MutS
gi|225646404|gb|ACO04590.1| DNA mismatch repair protein MutS [Persephonella marina EX-H1]
Length = 870
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 200/624 (32%), Positives = 324/624 (51%), Gaps = 56/624 (8%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ Y DSY+RLD +A + L ++ + N L +M+RT T GMG+R L +L PL
Sbjct: 253 KPYREDSYVRLDYSAQKHLEIV---SPNEGNIPLLRVMDRTLT-GMGRRKLRFFLLHPLK 308
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
+ EI R + V V++T LR+ +R L +I DIERL+ + + + +V L +S
Sbjct: 309 NSKEIIKRQNAVTELVENTELREKIRDILDQIFDIERLISKISSNTSTPRDLVGLRESLK 368
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL-NKFIALVETSVDLDQLENGEYM 461
++ ++ ++ + S L+KE + E + D L K +E + E G +
Sbjct: 369 KVSKLKEISKEIK---SDLLKESF----ERIEDYSWLIEKLDRYLEDDPPIHLKEGG--L 419
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I D L LK +E + S ++ + + ++LK+ G+ +TK
Sbjct: 420 IKKGVDKDLDELKEIKEKGNEWLKSYQEKLRKETGI---QSLKIGFNKVMGYYIEVTK-- 474
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
P + K + F +T + +F +L+ ++ E+ K + E+ R+ +
Sbjct: 475 -PNL-KLVPDHFRRRQTLSNAERFITDELQSFEEKILSADEKIKALEYEIFMRIREEVAF 532
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
S+ A + +D + S A +A +T+PDI+ D +I ++ HP ++ +
Sbjct: 533 LSDRIGKTAQQVGMIDAIQSLAQIA--VEKGWTKPDIH--DGYEIEIKEGYHPVIK-EFM 587
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
+F+PN+ K+ R S+F IITGPNM GKSTFIRQ + IL+AQ GS++P + I V D
Sbjct: 588 PDFVPNNLKMNRN-SYFHIITGPNMAGKSTFIRQSAIIILLAQTGSYIPAKKGKIGVVDA 646
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF R+G+GD +G+STFM EMLE A+I+ AT+RS I++DE+GRGTSTYDG + WAI
Sbjct: 647 IFTRIGSGDALAKGLSTFMVEMLEMANIVNNATERSFIVLDEVGRGTSTYDGLSIGWAIS 706
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
E+L E+++ TLFATH+HELT L E + GV N+H+ D + K LY+
Sbjct: 707 EYLAEKVKVKTLFATHYHELTQLERE---------IKGVKNFHMDIFEDGENIKF--LYR 755
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS 881
V+ G ++S+G+HVA+ A E ++ A E E+ D K+E
Sbjct: 756 VKEGFSNKSYGVHVAKLAGIKEQIIKRAYEILYYFEE-------QRDKKLE--------- 799
Query: 882 DPNDMSRGAARAHQFLKEFSDMPL 905
D+ + + +L E +++PL
Sbjct: 800 --EDIYSLKQKENSYLNEINELPL 821
>gi|325289888|ref|YP_004266069.1| DNA mismatch repair protein MutS [Syntrophobotulus glycolicus DSM
8271]
gi|324965289|gb|ADY56068.1| DNA mismatch repair protein MutS [Syntrophobotulus glycolicus DSM
8271]
Length = 853
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 217/669 (32%), Positives = 335/669 (50%), Gaps = 44/669 (6%)
Query: 250 LVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDS-YMRLDSAAMRALNVLESKT 308
L+ ++ A GAL +Y + +S+ N K S M LD + L ++ES
Sbjct: 211 LLEQMPVSARAAGALWNYIKKNIPDSSLQNVIELKSCRQSEVMVLDRWTRKNLELVESSR 270
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
++ ++F ++N T TA G R+L W++QPLL+ +I ARLD V+ +T RQ+L
Sbjct: 271 FGDERGTIFDVLNLTKTA-FGARMLRHWIQQPLLNKEQIEARLDTVEELTKNTFARQELF 329
Query: 369 QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLD 428
+ L + D+ERL L +A + ++ L + LP +R + Q++ L +YL+
Sbjct: 330 KCLSHVYDLERLTARLSYGKASPRDMLALAATLACLPEVRKIIHQHQ----VLTLTKYLE 385
Query: 429 PLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
P+ L DD K + + + E +I++ Y + L+ I L
Sbjct: 386 PISGL--DDLSAKLLKAINPDAPVTLHEGN--IINNGYIPEIDRLRAVASGGRDWIARLE 441
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNT 548
Q + K+LK+ FG+ IT + + +I +T + ++
Sbjct: 442 NQEREKTKI---KSLKIGYNKVFGYYIEITNANSHLVPE----DYIRKQTLANCERYITP 494
Query: 549 KLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASS 608
+LK+ Q E+ + + + + ++ + + A + E+DV LS A+ A
Sbjct: 495 ELKEYEQQVLNAQEKLFDLEYAVYTELKDEVLSHTPPILNAAQAIGEIDVFLSLAEAA-- 552
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y RP+IN + G I + RHP VE F+PND L KS +ITGPNMGG
Sbjct: 553 VRHHYVRPEIN--NEGTIHIVEGRHPVVEQVCNDLFVPNDTLLTSSKS-LALITGPNMGG 609
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQV + +L++QVGSFVP +A+I++RDCI+ RVGA D G STFM EM E A
Sbjct: 610 KSTYMRQVALIVLLSQVGSFVPAQKAAIALRDCIYTRVGASDNLASGQSTFMVEMNEVAF 669
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP--TLFATHFHELTALAH 786
IL+ A RSLII+DE+GRGT+TYDG LAWAI E+L A TLFATH+HELTAL
Sbjct: 670 ILQNAASRSLIILDEVGRGTATYDGLSLAWAIVEYLAGNPTAQPLTLFATHYHELTAL-- 727
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
V N HV+ + + L+K+ PG D+S+G+HVA+ A P ++
Sbjct: 728 -------ETMFPAVFNLHVA--VREKGSDILFLHKILPGKADRSYGLHVAKIAGLPLDLL 778
Query: 847 TLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLE 906
A ELE + ++EV + + D ++ H LKE ++ L+
Sbjct: 779 KRAESILRELESLSGETYPDKATRVEV--LQPSLFDQEEV-------HPLLKEVEEIDLD 829
Query: 907 TMDLKEALE 915
M K+A++
Sbjct: 830 RMTPKQAMD 838
>gi|407473973|ref|YP_006788373.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
gi|407050481|gb|AFS78526.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
Length = 900
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 216/609 (35%), Positives = 320/609 (52%), Gaps = 51/609 (8%)
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMN 321
GALL Y S I YSL+SYM LD R L + E+ +K SL +++
Sbjct: 245 GALLEYLNETQKTSLKHINNINIYSLESYMILDINTRRNLELTETIRGKSKKGSLLSVLD 304
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
RT T+ MG RLL W+++PL+D +I RLDIV+ F ++ L D+++ LK + DIERLM
Sbjct: 305 RTSTS-MGARLLKKWIEEPLIDKEKIEYRLDIVEYFTENIILMNDIKEILKNVYDIERLM 363
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK-ERYLDPLESLTDDDHLN 440
+ + ++ L S ++P ++S L+ + + LIK R +D L DD H
Sbjct: 364 GRIVYGNCNGRDLISLKSSISKVPELKSILETCDSK--ELIKLGREVDCL----DDIHEL 417
Query: 441 KFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVD 500
+A+VE + N +I YD LS LK + + L ++ ++ +
Sbjct: 418 IDLAIVEEPPIAIKEGN---LIKPEYDEELSLLKEASIKGKEWLSKLEEKEKNNTGI--- 471
Query: 501 KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGD 555
K LK+ FG+ ++K K + FI +T + ++ +LK+ LG
Sbjct: 472 KNLKIGFNRVFGYFIEVSKSN----VKLVPDYFIRKQTLANAERYITDELKEMEEKILGS 527
Query: 556 QYQKVLEEYK---NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
+ + V EY N + ++ VI+ ++ + ++SE+DV+ S + S+
Sbjct: 528 EEKMVELEYNIFLNIRDKIRANVIR--------IQNTSKIISEIDVMNSLS--YSAYEND 577
Query: 613 YTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKST 671
Y RP IN V DI RHP VE +F+PND L + IITGPNM GKST
Sbjct: 578 YKRPTINSNGVIDI--RNGRHPVVEKVLSNESFVPNDTLLDCDDNRLSIITGPNMAGKST 635
Query: 672 FIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 731
++RQV + LM Q+GSFVP D A+IS+ D IF R+GA D +G STFM EM E A+IL
Sbjct: 636 YMRQVALITLMTQLGSFVPADEANISIVDRIFTRIGASDDLSQGQSTFMVEMSEVANILN 695
Query: 732 GATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHFHELTALAHENA 789
T SLII+DE+GRGTSTYDG +AWA+ E++ ++ + + TLFATH+HELT L
Sbjct: 696 NGTKNSLIILDEIGRGTSTYDGLSIAWAVSEYISDKSKMGSKTLFATHYHELTELED--- 752
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
++ GV NY + ++ + + L K+ G D+S+GI VA+ A E VV A
Sbjct: 753 ------KLSGVKNYKILVQ-ENENDDIIFLRKIVRGGADRSYGIEVAKLAGVREDVVKRA 805
Query: 850 REKAAELED 858
E LE+
Sbjct: 806 YEILQSLEE 814
>gi|218132528|ref|ZP_03461332.1| hypothetical protein BACPEC_00387 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992638|gb|EEC58640.1| DNA mismatch repair protein MutS [[Bacteroides] pectinophilus ATCC
43243]
Length = 884
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 212/647 (32%), Positives = 330/647 (51%), Gaps = 53/647 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
A GALL Y LL + N + + Y+ YM +DS++ R L ++E+ + K SL
Sbjct: 236 AAGALLQY--LLETQKNSLEHLTTLMPYTTGKYMLIDSSSRRNLELVETLREKQKRGSLL 293
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
++++T TA MG R L ++QPL+D +EI R D++ F D+ R+++R++L + D+
Sbjct: 294 WVLDKTKTA-MGARRLRAMIEQPLIDHDEIINRQDVIAEFNDNVITREEIREYLNPVYDL 352
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERLM + R A + ++ S LPY++ ++ + I E+ LDPLE +
Sbjct: 353 ERLMSKISCRTANPRDLLAFRSSLQMLPYVKDLIKPFNSVLMQKIYEK-LDPLEDI---- 407
Query: 438 HLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
L+++++ D L G +I Y+ L+ + + + L ++
Sbjct: 408 -----YQLIDSAIVDDPPIVLREGG-IIKEGYNAQADELRKAKTDGKTWLAGLEEREKEQ 461
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLG 554
+ K L++ FG+ +T + + ++ +T + ++T +LK L
Sbjct: 462 TGI---KNLRVKYNKVFGYYLEVTNS----YKDLVPDNWVRKQTLSNAERYTTEELKNLE 514
Query: 555 DQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYT 614
D ++ + +L V + +S A ++E+DV S A +A Y
Sbjct: 515 DVILGAEDKLYALEYDLFVDVRDKIASQVMRIQSTAKAIAEIDVFASLALVAEQ--NNYV 572
Query: 615 RPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKST 671
RP IN D G I ++ RHP VE + D FI ND L + IITGPNM GKST
Sbjct: 573 RPKIN--DKGLIDIKDGRHPVVEKMISNDM--FIANDTLLDNNANRISIITGPNMAGKST 628
Query: 672 FIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 731
++RQ + +LMAQVGSFVP A+I + D IF RVGA D G STFM EM E A+IL+
Sbjct: 629 YMRQTALIVLMAQVGSFVPASSANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILR 688
Query: 732 GATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENA 789
AT +SL+I+DE+GRGTST+DG +AWA+ EH+ + + A TLFATH+HELT L
Sbjct: 689 NATSKSLLILDEIGRGTSTFDGLSIAWAVVEHISNKNLLGAKTLFATHYHELTELEG--- 745
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
+ GV NY ++ + + L K+ G D+S+GI VA+ A P+SV+ A
Sbjct: 746 ------TLGGVNNYCIA--VKEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDSVIARA 797
Query: 850 REKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQF 896
+E +L D A IS AK E+ K+ D + + +Q
Sbjct: 798 KELVNDLSD----ADISQKAK-EIAQYDKKKPDEKYIRKNELEVNQM 839
>gi|28210987|ref|NP_781931.1| DNA mismatch repair protein MutS [Clostridium tetani E88]
gi|44888200|sp|Q895H2.1|MUTS_CLOTE RecName: Full=DNA mismatch repair protein MutS
gi|28203426|gb|AAO35868.1| DNA mismatch repair protein mutS [Clostridium tetani E88]
Length = 881
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 201/653 (30%), Positives = 346/653 (52%), Gaps = 52/653 (7%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ Y++ Y+ +D + R L + E+ D ++ SL ++++ C+ MG RL+ W++QPL+
Sbjct: 250 KNYNIVDYLSMDINSRRNLEITETIRDKSRKGSLLWVLDK-CSTAMGARLIRNWVEQPLI 308
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
+ +I+ RL+ V+ V + +L +DL+ LK I DI+R++ + + ++++ L S
Sbjct: 309 NKEKIDKRLNAVEELVLNISLHEDLKDALKDIYDIQRIVGKISSKNVNAKELLSLKNSIE 368
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ----LENG 458
+LPYI+ L + E + D L +L D L L+E+S+ +D +++G
Sbjct: 369 KLPYIKDILSKLEADL-------FKDMLSNL---DELKDIYELLESSI-MDNPPITIKDG 417
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I + ++ + L+ + + I +L +S+ + K+LK+ FG+ +T
Sbjct: 418 N-LIKNGFNKEIDELRMAKSHGKEWIANLE---SSEREFTGIKSLKVGYNKVFGYFIEVT 473
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I +++ +T + ++ +LK++ D+ E+ + + E+ + +
Sbjct: 474 K---SNISSVPEGRYVRKQTLSNCERYITPELKEMEDKILGAEEKLISLEYEVFVSIRNS 530
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ K A +++ LD L S + +A Y++P I + DII++ RHP VE
Sbjct: 531 IEKDIDRMKISANIVAILDCLSSLSTVA--LENNYSKPKI--LEGNDIIIKDGRHPVVEK 586
Query: 639 QDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
+F+ ND + + +ITGPNM GKST++RQV + +MAQ+GSFVP ASIS
Sbjct: 587 MIPTGSFVANDTTMDTEDNQMLLITGPNMAGKSTYMRQVALITIMAQIGSFVPAKEASIS 646
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
+ D IF R+GA D G STFM EM E ++ILK AT +SLII+DE+GRGTST+DG +A
Sbjct: 647 LCDKIFTRIGASDDLSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTFDGLSIA 706
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
WA+ E++ + +R+ TLFATH+HEL L + ++ GV NY VS + +
Sbjct: 707 WAVIEYICNNKNLRSKTLFATHYHELIQLEN---------KIKGVKNYSVS--VKEMDKD 755
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAK----- 870
+ L K+ G DQS+GI VA+ A PE V+ A+E +E + + DD K
Sbjct: 756 IVFLRKIIEGGADQSYGIEVAKLAGLPEDVIIRAKEILNSIEQNKDNKIELDDIKENKNH 815
Query: 871 IEVGSKRKRISD---PND---MSRGAARAHQFLKEFSDMPLETMDLKEALERV 917
IE +K++ +D ND +S +KE S + + ++ E ++
Sbjct: 816 IEKENKKEIATDKLLANDDFQISFTQIEEENLIKEISSIDILNLNPMEGFNKL 868
>gi|451982372|ref|ZP_21930688.1| DNA mismatch repair protein mutS [Nitrospina gracilis 3/211]
gi|451760378|emb|CCQ91973.1| DNA mismatch repair protein mutS [Nitrospina gracilis 3/211]
Length = 882
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 228/699 (32%), Positives = 349/699 (49%), Gaps = 80/699 (11%)
Query: 253 GFEIAPGAL---GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTD 309
G E P A+ GAL+ Y + + + +S M LD + + +L +++S +D
Sbjct: 238 GCEAWPAAVSAAGALVQYLKETQKSALQHITSLSTFSTQDSMMLDQSTINSLELVQS-SD 296
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
+ SL G ++ TCT +G R L W+ +PL+ + I RLD+V + + R DLR+
Sbjct: 297 GQRKHSLLGHLDATCTP-LGARRLREWILKPLIRLEAIEQRLDLVGHYREHLLERNDLRE 355
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--L 427
LK I D+ERL+ + + ++ L S LP I+ + + S I++ + L
Sbjct: 356 RLKHIFDLERLLGKISMATCTPRDLIALKNSLRALPEIQEMIGRCPLPAMSAIRDGWDNL 415
Query: 428 DPL-----ESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
D L E + DD LN +++G +I D L LK+ + +
Sbjct: 416 DNLYQGIDEQIEDDPPLN--------------IKDGG-LIKPGCDQELDRLKSIMKDSNQ 460
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
I +L + +P LK+ +G+ +TKK ++ +I ++ +
Sbjct: 461 AIANLEAREKERTGIP---QLKVGYNKIYGYYLEVTKKN----LDRVPDDYIRKQSLVNA 513
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
+F + +LK+ + E+ + ++ L + V Q+ +++A + ELD LL F
Sbjct: 514 ERFISPELKQYESEITGAEEKVQIIEQRLFHEVRQSVAAEGARIQAMAKRIGELDALLGF 573
Query: 603 ADLASSCPTPYTRPDINPPDVGDII-LEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQI 660
A +A Y RP + D GD + ++ RHP VE D FIPND L + I
Sbjct: 574 AQIAHQ--QNYCRPQM---DDGDALRIQNGRHPLVELIDPNQPFIPNDTHLDCDEHQVAI 628
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQV + +LMAQ+G FVP + A I + D IF+RVGA D +G STFM
Sbjct: 629 ITGPNMAGKSTYLRQVALIVLMAQIGCFVPAEEAEIGLVDRIFSRVGAQDHLQKGQSTFM 688
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHF 778
EM ETA+IL AT RSLI++DE+GRGTST+DG +AWAI E L I A TLFATH+
Sbjct: 689 VEMNETANILNNATRRSLIVLDEIGRGTSTFDGISIAWAIVEFLQGPGHIGAKTLFATHY 748
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HELT L + V NY+V I + ++ L K+ PG D+S+GIHVA
Sbjct: 749 HELTEL---------ERLFHSVKNYNV--QIKEWNDQIIFLRKIVPGGADKSYGIHVARL 797
Query: 839 ANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLK 898
A PE V+ A E LE + EVG+ +++ P G Q L
Sbjct: 798 AGLPEQVLQRANEVLFNLE---------NSEYDEVGT--PKLAQPQPPETGP----QQLG 842
Query: 899 EFSDMP------LETMDL-----KEALERVKRMKDDLEK 926
F ++P ++ +DL ++ALE++ ++D L+K
Sbjct: 843 LFGEVPPPLIQMIKRLDLDDLTPRQALEKLYELRDLLKK 881
>gi|255655930|ref|ZP_05401339.1| DNA mismatch repair protein [Clostridium difficile QCD-23m63]
gi|296450648|ref|ZP_06892401.1| DNA mismatch repair protein MutS [Clostridium difficile NAP08]
gi|296879235|ref|ZP_06903230.1| DNA mismatch repair protein MutS [Clostridium difficile NAP07]
gi|296260492|gb|EFH07334.1| DNA mismatch repair protein MutS [Clostridium difficile NAP08]
gi|296429778|gb|EFH15630.1| DNA mismatch repair protein MutS [Clostridium difficile NAP07]
Length = 947
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 307/572 (53%), Gaps = 36/572 (6%)
Query: 290 YMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINA 349
YM LD L + ++ K SL ++++T TA MG RLL ++++PL++ ++I
Sbjct: 264 YMVLDMFTRTNLELTQTIRGNKKKGSLLHVLDKTSTA-MGGRLLRKYVEEPLINKSKIEN 322
Query: 350 RLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS 409
RLD+++ DD LR+DL LK I DIER+ + R ++++ L S +LP ++
Sbjct: 323 RLDVIEEIKDDFILREDLNDILKNIYDIERICGKIAFERVTPKELIHLKNSIEKLPNLKD 382
Query: 410 ALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
+ + ++KE Y+ ++ L D +L L E ++ +++G +I S +
Sbjct: 383 TINLSNAK---ILKE-YVSGMDKLDDIYNLIDEAILEEPTI---TIKDGN-IIKSDFSDE 434
Query: 470 LSALKNEQES---LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L L+ ++ L ++I + ++ K+LK+ FG+ ITK +
Sbjct: 435 LKELREISKNGAFLVKEIENREREKTGV------KSLKIGFNKVFGYYIEITKANFK--Q 486
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
KL +I +T + ++ +LK++ ++ E+ K+ + E+ + T +
Sbjct: 487 AKLDETYIRKQTLSNAERYITPELKEIEEKILHAEEKIKSLEYEIFVEIRDTIYKNIDRI 546
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFI 645
+ +A ++ +DV +S A +A Y +P IN + DI RHP VE NF+
Sbjct: 547 QKVAKTIANIDVFVSLATVAH--INNYVKPAINENNKLDI--RNGRHPVVENIVGEENFV 602
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
PND L RG++ IITGPNM GKST++RQ + LMA +GSFVP + A I + D IF R
Sbjct: 603 PNDTYLNRGENIINIITGPNMSGKSTYMRQTAIIALMAHIGSFVPAEYADIPILDRIFTR 662
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D +G STFM EM E + ILK AT+RSL+I+DE+GRGTSTYDG LAW+I E++
Sbjct: 663 VGASDDLSQGQSTFMVEMNEVSLILKNATERSLVILDEIGRGTSTYDGISLAWSIVEYIQ 722
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+ IR TLFATH+HELT L E V NY ++ D + L K+ P
Sbjct: 723 KNIRCKTLFATHYHELTDLEEE---------FKEVKNYSIAVKEDGEG--IIFLRKIIPQ 771
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
D+S+GI+VA+ A P+ V+ A+ +LE
Sbjct: 772 GADKSYGIYVAKLAKLPDEVIERAKYILKDLE 803
>gi|449943285|ref|ZP_21806343.1| DNA mismatch repair protein MutS [Streptococcus mutans 11A1]
gi|449149448|gb|EMB53250.1| DNA mismatch repair protein MutS [Streptococcus mutans 11A1]
Length = 849
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 226/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLNDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
+VD + E G MI +D L + E S I + +Q +
Sbjct: 397 AVDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|410696516|gb|AFV75584.1| DNA mismatch repair protein MutS [Thermus oshimai JL-2]
Length = 804
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL+YA E+ + R Y ++M L A +RAL V E + +LF +
Sbjct: 217 AQGALLAYARYTQGEA-FSPRPFRPYDPGAFMGLSEATLRALEVFEPLRGQD---TLFAV 272
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++ T TA G+RLL WL+ PLL+V I ARLD V+AFV D+ALR+ +R+ L R+SD+ER
Sbjct: 273 LDETRTAP-GRRLLQAWLRHPLLEVGPIEARLDRVEAFVRDSALREGVRRLLHRVSDLER 331
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD-DDH 438
L LE RA + + L ++ LP + S+L+ E + PL L +
Sbjct: 332 LATRLELGRANPKDLAALRRTLAVLP-----------ELSALLGEGF--PLPELGPLKEE 378
Query: 439 LNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
L ALVE L E G +I YD LSAL+ E +L +Q + +P
Sbjct: 379 LEA--ALVEDP-PLKVSEGG--VIREGYDPELSALRRAHEEGVAYFLALEEQERARTGIP 433
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
LK+ FG+ +T+ ++ ++ L+T KD ++ ++K+ +
Sbjct: 434 T---LKVGYNAVFGYYLEVTRP----YYDRVPPEYKPLQTLKDRQRYALPEMKEKERELY 486
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
++ + ++E+ + + A E + A +L+ELDV + A++A Y RP
Sbjct: 487 RLEALARRREEEVFQALKERAKREGEALREAARLLAELDVYAALAEVAVRYG--YVRPRF 544
Query: 619 NPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
+ + G RHP VE + F+PND ++ G ++TGPNM GKSTF+RQ +
Sbjct: 545 G----ERLFIRGGRHPVVERR--TAFVPNDLEMDHG---LVLVTGPNMAGKSTFLRQTAL 595
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
L+AQ+GSFVP + A + + D IF R+GA D G STFM EM E A +L+ AT++SL
Sbjct: 596 IALLAQMGSFVPAEEAVLPLFDRIFTRIGAADDLAGGRSTFMVEMEEVAQVLREATEKSL 655
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMV 798
+++DE+GRGTS+ DG +A A+ E L E R LFATH+ ELTAL +
Sbjct: 656 VLLDEVGRGTSSLDGVAIATAVAEAL-HERRCYALFATHYFELTAL-----------NLP 703
Query: 799 GVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ N HV+A ++ L ++V PG +S+G+ VA+ A P VV AR
Sbjct: 704 RLKNLHVAAKEEAGG--LVFYHQVLPGPASKSYGVEVAQMAGLPREVVERAR 753
>gi|374308280|ref|YP_005054711.1| DNA mismatch repair protein MutS [Filifactor alocis ATCC 35896]
gi|291166608|gb|EFE28654.1| DNA mismatch repair protein MutS [Filifactor alocis ATCC 35896]
Length = 870
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 208/648 (32%), Positives = 345/648 (53%), Gaps = 54/648 (8%)
Query: 288 DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
D Y+ LD +++ L ++ES NK +SLFG++++T T+ MG R+L W++ PL D EI
Sbjct: 268 DKYLHLDYSSISNLELMESFLQKNKKYSLFGVLDKTKTS-MGARMLRKWIEHPLRDKKEI 326
Query: 348 NARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYI 407
RLDIV+ + D +LR+DLR++L + D+ER+ + ++ ++ L +S LP +
Sbjct: 327 EQRLDIVEECISDYSLREDLREYLDSVYDMERICAKISYDTVTVRDLLNLKESLYDLPNL 386
Query: 408 RSALQQYEGQFSSLIKERYLDPLES---LTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
R ++ + + I E+ +D LE L DD ++ I ++ +GE +I
Sbjct: 387 REKIELSDKKLLIQIFEQ-MDTLEDIYHLLDDSISDRPIGTIK---------DGE-VIRE 435
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
Y L +++ +++ + + Q + K LK+ FG+ IT
Sbjct: 436 GYSKELDEMRSIEKNAASILSQMELQERASTGF---KTLKIGYNKVFGYYIEITHAALKS 492
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
+L ++ +T + ++ N +LK+L + + + Q EL V +T V +
Sbjct: 493 --GELPESYVRKQTLANCERYINQELKELEIKILTSRQRALDLQNELYAEV-KTQVKHA- 548
Query: 585 IFK--SLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE--AQD 640
+F+ + A + LD LLS A+ +S Y +P IN +I RHP VE ++
Sbjct: 549 VFRIQTTADKIGSLDALLSLAE--TSYQNDYVKPSINKEKRLEI--ADGRHPVVERLVEE 604
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
+ F+PND L++ K+ F IITGPNMGGKST++RQV + +MA +G ++P I + D
Sbjct: 605 QI-FVPNDTNLLKDKN-FMIITGPNMGGKSTYMRQVALICIMAHIGCYIPAKSGDIPLLD 662
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
I+ RVGA D +G STFM EM E + IL+ AT+ SL+I+DE+GRGTSTYDG +AWAI
Sbjct: 663 AIYTRVGAADDLSQGQSTFMVEMNEVSHILEHATEHSLVILDEVGRGTSTYDGMSIAWAI 722
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
+ +I+ TLF+TH+HE+T +A N V NY V+ ++ ++ L
Sbjct: 723 VAFICRKIQCMTLFSTHYHEITDIAERFDN---------VVNYCVA--VEEKKEEVLFLR 771
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP--SAVISDDAKIEVGSKRK 878
K+ G D+S+GIHVA+ A+ P+ V++LA K +L+ S I +D +E +
Sbjct: 772 KLVQGKADKSYGIHVAKLAHLPKEVLSLAEHKLNQLQSQKQEWSREIGEDVFVEESKE-- 829
Query: 879 RISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEK 926
SD ++ + + + E + +T+ EAL + ++K+ L K
Sbjct: 830 --SDIKNL-----KHREIINELEGINTDTLTPLEALLVIHKIKEKLLK 870
>gi|449964622|ref|ZP_21811410.1| DNA mismatch repair protein MutS [Streptococcus mutans 15VF2]
gi|449172346|gb|EMB74976.1| DNA mismatch repair protein MutS [Streptococcus mutans 15VF2]
Length = 849
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELAALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|383761504|ref|YP_005440486.1| DNA mismatch repair protein MutS [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381772|dbj|BAL98588.1| DNA mismatch repair protein MutS [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 874
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 298/578 (51%), Gaps = 37/578 (6%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y+LD++M LD A R L + E+ SL G++N T T MG RLL W+ QPLLDV
Sbjct: 264 YTLDAFMTLDEATRRNLELTETMRSGEVEGSLLGVLNATLTP-MGSRLLRRWINQPLLDV 322
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
IN RLD VQ FVDDT LR DLR L+ D+ER + + + A + +V + ++
Sbjct: 323 AAINRRLDAVQRFVDDTLLRLDLRALLQNFGDLERWTNRVMQGIALPRDLVGIREALRLA 382
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLEN--GEYMI 462
P + L ++ TD +AL+E+++ D N +I
Sbjct: 383 PKVAERLGNWQRAHED----------SGTTDFPLCADILALLESALVDDPPANLSTPGLI 432
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
+D L +L I L + L + K LK+ FG+ +TK +
Sbjct: 433 RPGFDAELDSLVERSRHAREWIAGLEQVERERLGI---KNLKVGYNKVFGYYIEVTKSQ- 488
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTF 582
++ +I +T +G ++ +LK+ E ++ L +
Sbjct: 489 ---LDRVPNSYIRKQTIANGERYITPELKEYETLVLNADERRLEIEQRLFGEICAQVAAQ 545
Query: 583 SEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DW 641
LA +L+E+DV + A++A + Y RP+++ +I+ RHP VE
Sbjct: 546 GTRLLHLAHLLAEIDVFAALAEVALT--RRYVRPEVDEGPCIEIV--AGRHPVVEMTLTD 601
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
F+PND L+ ++ QIITGPNM GKST++RQ + LMAQ+GSFVP +RA I V D
Sbjct: 602 EPFVPNDT-LLTPETAIQIITGPNMSGKSTYLRQTALITLMAQIGSFVPAERARIGVVDR 660
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
IF R+GA D RG STFM EM+ETA+IL AT RSL+++DE+GRGTSTYDG +AWA+
Sbjct: 661 IFTRLGASDEIHRGQSTFMVEMVETANILHHATPRSLLLLDEIGRGTSTYDGLAIAWAVI 720
Query: 762 E--HLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTML 819
E H +RA TLFATH+HELT LA +++ V NY+V+ + L
Sbjct: 721 EYIHNHPRLRAKTLFATHYHELTDLA---------ERLPHVVNYNVAVDDSGDGEDVVFL 771
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ PG D+S+G+HVA A P VV A E A+LE
Sbjct: 772 RRIIPGKADRSYGVHVARMAGLPAQVVARAEEILADLE 809
>gi|253701106|ref|YP_003022295.1| DNA mismatch repair protein MutS [Geobacter sp. M21]
gi|259511168|sp|C6DZZ3.1|MUTS_GEOSM RecName: Full=DNA mismatch repair protein MutS
gi|251775956|gb|ACT18537.1| DNA mismatch repair protein MutS [Geobacter sp. M21]
Length = 869
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 231/723 (31%), Positives = 357/723 (49%), Gaps = 66/723 (9%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ EF T ++ AL C+ P E + C
Sbjct: 134 DGECYGLSYLDLST-----GEF----RVTELDGLQAALAEVTCIGPREIILPV-CFREEP 183
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLD---RLVRGSVEPVRDLVSGFEIAPGAL---GAL 264
++ +R T F+ + V D D RLV + G + P AL GA+
Sbjct: 184 KRKEVAHVIVDRSITYFE--EWVYDPDYCKRLVANQFKGATAESLGCDRLPTALLAAGAV 241
Query: 265 LSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNR 322
L Y L+ + + + I Y+ ++ LD + R L + + ++ + SL GLM+R
Sbjct: 242 LHY--LVDTQKGHAPHVTCITPYNESEHLLLDESTRRNLELTATLSEGKRKGSLLGLMDR 299
Query: 323 TCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMH 382
T TA MG R L W+ PL+D+ +I R D +Q ++ R+ ++ L + D+ERL
Sbjct: 300 TVTA-MGGRKLKQWINYPLMDLKKIWLRQDAIQELMEAPGTREAMKSLLAGVYDLERLNG 358
Query: 383 NLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE--RYLDPLESLTDDDHLN 440
+ A + + L S RLP I+ +Q + L+KE +DPL+ L+D
Sbjct: 359 RISLASASAKDLSALRSSLSRLPAIK---EQVAACGAGLLKELDAGIDPLDELSD----- 410
Query: 441 KFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
L+ +++ D L +G +I+ Y+ L L+ + I L Q +
Sbjct: 411 ----LISSAIVDDPPFVLRDGG-IIADGYNQELDELRAISREGKGFIARLEAQEKGRTGI 465
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
+LK+ FG+ +TK I +I +T + ++ +LK+ ++
Sbjct: 466 ---SSLKIRYNKVFGYYIEVTKANVSAI----PDDYIRRQTLANAERYITPELKEYEEKV 518
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ K+ + L V + A E A L+ LDVL+S ++LA Y RP+
Sbjct: 519 LGAEDRIKDLEFSLFQEVREAAAAQGERIARSADRLACLDVLVSLSELAHD--KGYCRPE 576
Query: 618 INPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
++ + ++ + RHP +E F+PND L G++ IITGPNM GKSTF+RQV
Sbjct: 577 VH--EGSELSITEGRHPVIEDMHSAERFVPNDTLLDNGENQLIIITGPNMAGKSTFMRQV 634
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ LMAQ+GSFVP D+A I + D IF RVGA D RG STFM EM+E+A+IL+GAT R
Sbjct: 635 ALISLMAQMGSFVPADKALIPLVDRIFTRVGASDNLARGHSTFMVEMMESAAILRGATAR 694
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEI--RAPTLFATHFHELTALAHENANEFNT 794
SL+I+DE+GRGTST+DG +AWA+ E L + A TLFATH+HELT LA
Sbjct: 695 SLVILDEIGRGTSTFDGVSIAWAVAEFLHDNKIHAAKTLFATHYHELTELAVTRP----- 749
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
G+ N++++ + + ++ L K+ PG S+GI VA A P++V+ A+E
Sbjct: 750 ----GIKNFNIA--VREWNERIIFLRKIVPGGASHSYGIQVARLAGLPQAVIDRAKEILI 803
Query: 855 ELE 857
LE
Sbjct: 804 NLE 806
>gi|373456284|ref|ZP_09548051.1| DNA mismatch repair protein mutS [Caldithrix abyssi DSM 13497]
gi|371717948|gb|EHO39719.1| DNA mismatch repair protein mutS [Caldithrix abyssi DSM 13497]
Length = 884
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 201/593 (33%), Positives = 306/593 (51%), Gaps = 47/593 (7%)
Query: 281 YIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQP 340
++++ +L YM LD + R L + ES + +L ++ T T MG RL W++QP
Sbjct: 262 HLQRVNLSRYMVLDESTRRNLEISESISGGGVRNTLLHFIDFTITP-MGARLFKQWIQQP 320
Query: 341 LLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQS 400
LLD+ EIN RLDIV V D LR+ L LK+I D ERL+ + RA + ++ L QS
Sbjct: 321 LLDMEEINHRLDIVSELVGDAPLREQLAAELKQIFDTERLLGKIVTNRANARDVLNLGQS 380
Query: 401 SIRLPYIRSALQQ-----YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQL 455
++ I++ + Q + F S + LD L D A+VE Q
Sbjct: 381 LKQIVPIKAIIDQTTCDTLKAHFQSF---QILDSLTEKIDR-------AIVENPPITLQ- 429
Query: 456 ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
E G +I + Y L L+ E + + + ++ + LK++ FG+
Sbjct: 430 EGG--IIRAGYHAELDELRAISEQGKDWLLAYQQRERERTGI---STLKVNYNKVFGYYI 484
Query: 516 RITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
+T + KI +++ +T + +F +LK+ D+ E+ + L +
Sbjct: 485 EVTNVHKDKI----PPEYVRKQTLVNAERFITQELKEWEDKILGAEEKINELEYRLFQEI 540
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ + E + + +++ELD LS A ++ Y RP+I+ D + + RHP
Sbjct: 541 REEVGRYVEPIQLNSRLIAELDCFLSLAQ--AAIENNYVRPEID--DSRALEIREGRHPV 596
Query: 636 VEAQ--DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE +FI ND L IITGPNM GKSTF+RQVG+ +LMAQ+GS+VP +
Sbjct: 597 VEKTLPPGEDFIANDAYLDPDSEQIWIITGPNMAGKSTFLRQVGLIVLMAQIGSYVPAAK 656
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A I + D IF RVGA D G STF+ EM ETA+IL AT RSLI++DE+GRGTST+DG
Sbjct: 657 ARIGIVDRIFTRVGASDNLASGESTFLVEMNETANILNNATPRSLILLDEIGRGTSTFDG 716
Query: 754 FGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
+AWA+ E++ E +R TLFATH+HELT LA + NY+V+ ++
Sbjct: 717 LSIAWAVAEYIYREPRLRCKTLFATHYHELTELALLYPR---------IKNYNVA--VEE 765
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--DFTPS 862
++ L K+ PG D S+GI+VA+ A P ++ A+E LE + +P+
Sbjct: 766 WKDQVIFLRKIVPGGSDNSYGIYVAQMAGLPAPLIARAKEILTNLEANELSPT 818
>gi|449924910|ref|ZP_21799951.1| DNA mismatch repair protein MutS [Streptococcus mutans 4SM1]
gi|449162202|gb|EMB65354.1| DNA mismatch repair protein MutS [Streptococcus mutans 4SM1]
Length = 849
Score = 292 bits (747), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 221/726 (30%), Positives = 353/726 (48%), Gaps = 75/726 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE +
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKMS 788
Query: 861 PSAVIS 866
+ +S
Sbjct: 789 AAVSVS 794
>gi|333897075|ref|YP_004470949.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112340|gb|AEF17277.1| DNA mismatch repair protein mutS [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 857
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 314/579 (54%), Gaps = 41/579 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLES-KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
Y +S+M LD+ +R L ++ S D +K+ +L ++++T T MG RLL WL++PL+D
Sbjct: 258 YEDNSFMLLDNNTIRNLEIVYSINRDHSKSGTLLSVLDQTVTP-MGGRLLKRWLEEPLID 316
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
V +IN RL+ V +D R D+R LK I D+ERL L + + ++ + S R
Sbjct: 317 VEKINYRLNSVSELYNDYKGRLDIRDILKGIYDLERLSSKLVYQNINAKDLLSIKISIER 376
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGE--YM 461
LP ++ L +Y+ + I + LD L+ + D L++ S+ D N + +
Sbjct: 377 LPKLKQLLDKYKSNYLKEIFSK-LDTLQDIHD---------LIDKSIKDDPSSNVKEGNI 426
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I +D + L+ + I +L + K LK+ FG+ ++K
Sbjct: 427 IKDGFDKNIDELRRASIDGKSWIANLESYEKEKTGI---KTLKIGYNKVFGYYIEVSKSY 483
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
+ + +I +T + ++ +LK++ ++ + + E+ +R+ +
Sbjct: 484 ISSVPE----NYIRKQTLANAERYITPELKEIEEKILGAETKLVEMEYEIFDRIREQIK- 538
Query: 582 FSEIFKSLAT--MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ 639
+EI++ T ++ LDVL+S A +A + Y +P +N D I+++ RHP +E
Sbjct: 539 -NEIYRIQMTSRYIAILDVLVSLATVAET--NNYVKPIVNSSD--RIVIKDGRHPVIETI 593
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
+FI ND + I K IITGPNM GKST++RQV + +LMAQ+GSFVP A I V
Sbjct: 594 MDDSFISNDIE-IDDKKPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAEIGVV 652
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF RVGA D G STFM EM E + IL AT SLII+DE+GRGTSTYDG +A A
Sbjct: 653 DRIFTRVGASDDLFSGQSTFMVEMNEVSLILNSATKNSLIILDEVGRGTSTYDGMSIACA 712
Query: 760 ICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTML 819
I E++ ++I+A T+FATH+HELT L ++ G+ NY++S ++ T ++ L
Sbjct: 713 ILEYIHDKIKAKTMFATHYHELTNLED---------KLDGIKNYNIS--VEETDDEIIFL 761
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
K+ PGA D+S+GI VA+ A P+ V+ A++ LE+
Sbjct: 762 RKIIPGAADKSYGIQVAKLAGLPDEVIQNAKKILNNLEN 800
>gi|170755080|ref|YP_001781348.1| DNA mismatch repair protein MutS [Clostridium botulinum B1 str.
Okra]
gi|189030762|sp|B1IM68.1|MUTS_CLOBK RecName: Full=DNA mismatch repair protein MutS
gi|169120292|gb|ACA44128.1| DNA mismatch repair protein MutS [Clostridium botulinum B1 str.
Okra]
Length = 932
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 191/596 (32%), Positives = 323/596 (54%), Gaps = 49/596 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKNPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKKYLSNFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ 577
TK + + ++I +T + ++ +LK++ ++ E+ + + +L ++
Sbjct: 476 TKANLNLVPE---GRYIRKQTLSNAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRD 532
Query: 578 TAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE 637
+ + A ++S++D L S A +A Y +P+IN + +I++E RHP VE
Sbjct: 533 FIEENIDRMQKTARIISDIDCLCSLATVA--LENNYIKPNINAKN--EILIEEGRHPVVE 588
Query: 638 -AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP +A+I
Sbjct: 589 KVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANI 648
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
S+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +
Sbjct: 649 SICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSI 708
Query: 757 AWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
AW++ E++ + +R TLFATH+HELT L + GV NY VS +
Sbjct: 709 AWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS--VSELEN 757
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--------DFTPS 862
++ L K+ G DQS+GI VA+ A P V+ A+E +E + TPS
Sbjct: 758 EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNITPS 813
>gi|429246332|ref|ZP_19209662.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001628]
gi|428756642|gb|EKX79184.1| DNA mismatch repair protein MutS [Clostridium botulinum
CFSAN001628]
Length = 882
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 322/593 (54%), Gaps = 49/593 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL++
Sbjct: 255 YSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPLINK 313
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S ++
Sbjct: 314 NPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSIGKV 373
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLENGEY 460
PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 374 PYIKKYLSNFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI---------- 422
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ ITK
Sbjct: 423 -IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEITKA 478
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ + ++I +T + ++ +LK++ ++ E+ + + +L ++
Sbjct: 479 NLNLVPE---GRYIRKQTLSNAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRDFIE 535
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQ 639
+ + A ++S++D L S A +A Y +P+IN + +I++E RHP VE
Sbjct: 536 ENIDRMQKTARIISDIDCLCSLATVA--LENNYIKPNINAKN--EILIEEGRHPVVEKVI 591
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP +A+IS+
Sbjct: 592 PKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANISIC 651
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +AW+
Sbjct: 652 DKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWS 711
Query: 760 ICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
+ E++ + +R TLFATH+HELT L + GV NY VS + ++
Sbjct: 712 VIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS--VSELENEIV 760
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--------DFTPS 862
L K+ G DQS+GI VA+ A P V+ A+E +E + TPS
Sbjct: 761 FLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSLNITPS 813
>gi|449883047|ref|ZP_21784906.1| DNA mismatch repair protein MutS [Streptococcus mutans SA38]
gi|449250298|gb|EMC48364.1| DNA mismatch repair protein MutS [Streptococcus mutans SA38]
Length = 849
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 221/726 (30%), Positives = 353/726 (48%), Gaps = 75/726 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE +
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKMS 788
Query: 861 PSAVIS 866
+ +S
Sbjct: 789 AAVSVS 794
>gi|448593353|ref|ZP_21652351.1| DNA mismatch repair protein MutS [Haloferax elongans ATCC BAA-1513]
gi|445730261|gb|ELZ81851.1| DNA mismatch repair protein MutS [Haloferax elongans ATCC BAA-1513]
Length = 944
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 208/611 (34%), Positives = 318/611 (52%), Gaps = 47/611 (7%)
Query: 249 DLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLES 306
D V ++ A+GALL+YAE +S Y R D +++LD+ A+R+L + +S
Sbjct: 232 DAVVDADVERRAVGALLAYAEYAQGDSKL-EYVTRITRFDPREFLQLDATAIRSLELFDS 290
Query: 307 KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQD 366
++ A+ +LF +++ T A G+R L WL++PL+D + I ARLD V DD R D
Sbjct: 291 RS-AHAGSTLFSVLDETACA-PGRRRLEAWLRRPLVDRDAIEARLDAVGELADDALTRAD 348
Query: 367 LRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE-GQFSSLIKER 425
LR+HL + D+ERL+ + + RA + + L + R+P IR L + G+ + L
Sbjct: 349 LREHLSAVYDLERLVARVSRERANARDLRSLQTTLDRVPEIRGTLDNVDSGRLADL---- 404
Query: 426 YLDPLESLTD-DDHLNKFIALVETSVDLDQLENGEY-MISSSYDTGLSALKNEQESLERQ 483
D L+ L D D +++ I VD E E +++S +D L L+
Sbjct: 405 -RDSLDDLADVRDLIDRAI------VDDPPQEITEGGVVASGFDDELDDLRGTATEGREW 457
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
+ L + + +L + G+ +T P + K+ ++ +T K+
Sbjct: 458 VSDLEARERERTGI---DSLDVGYNQVHGYYIEVTN---PNL-DKVPDDYVRRQTLKNSE 510
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ D+ E + + +L V SE +++A L++LDVL + A
Sbjct: 511 RFYTPELKEREDEILSATERAETLEYDLFCEVRAEVAAESERIQAVADALADLDVLRTLA 570
Query: 604 DLASSCPTPYTRPDINPPDV---GDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQ 659
D+A + YTRP+ G I +E RHP VE QD F+PN L +G
Sbjct: 571 DVAVA--NDYTRPEFREEGTEAHGGIEIEAGRHPVVERTQD--EFVPNPTSLPQG--GVA 624
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
++TGPNM GKST++RQV + ++AQ+GSFVP A + V D +F RVGA D G STF
Sbjct: 625 LVTGPNMSGKSTYMRQVALVCILAQLGSFVPARAACLPVVDRVFTRVGASDDIAGGQSTF 684
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M+EM E IL AT+ SL+++DE+GRGTST DG +A A E + +E+ A TLFATH+H
Sbjct: 685 MREMSELTEILHNATEDSLVLLDEVGRGTSTADGLAIARATTEFIHDEVGAMTLFATHYH 744
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
+LT A E + GV N H +A T ++T L+ V G S+G+ VA+ A
Sbjct: 745 DLTDAASERS---------GVFNLHFTAA--QTDGEVTFLHSVAEGPSSSSYGVEVAQLA 793
Query: 840 NFPESVVTLAR 850
P +VV AR
Sbjct: 794 GVPPAVVDRAR 804
>gi|374629540|ref|ZP_09701925.1| DNA mismatch repair protein MutS [Methanoplanus limicola DSM 2279]
gi|373907653|gb|EHQ35757.1| DNA mismatch repair protein MutS [Methanoplanus limicola DSM 2279]
Length = 944
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 247/835 (29%), Positives = 410/835 (49%), Gaps = 70/835 (8%)
Query: 35 VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSD-ALSSVSVSKN---MFETIAR 90
+ FF D+Y GE+A +A T T+ + G AL+ V + + + +
Sbjct: 86 ILFFQMGDFYETFGEDAEVVAHELDITLTSRGRDKDGEKMALAGVPIHAGETYISRMVQK 145
Query: 91 DLLLERTDHTLELYEGSGSNWR-LVKSGTPGNLGSYEDVLFANNEMQDTP---VIVALFP 146
+ D + + G R +V+ TPG + ++ M T +++L
Sbjct: 146 GYRVAVCDQIEDPKKAKGLVKRDVVRVITPGTV--------IDSSMIGTSGSCYLMSLDY 197
Query: 147 NFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECK 206
N ++N G+ ++D++ ++E D + +T++ S +V EC++ + V S +
Sbjct: 198 NSKKN--EFGMAFLDVSTGEFFISECRDKNGYTSLNSEIVRYSPSECII-SNKVPESAVR 254
Query: 207 TLRDALTRCGVMLTERKKTEF---KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGA 263
L D +++T F +D +QD + S+E + G ++A + GA
Sbjct: 255 QLEDK----NILVTPYNTRAFDYETAKDFLQDYFSI--SSLEGFGCM--GMDLAVCSAGA 306
Query: 264 LLSYAELLSDESNYGNYYIRKYSL---DSYMRLDSAAMRALNVLESKTDANKNFSLFGLM 320
LSYA + + + G +IRK S+ ++ M LD+ +R L +LE+ + K+ SLFG++
Sbjct: 307 CLSYA-CYTQKKDLG--HIRKLSVRIPENNMVLDAITLRNLEILENIRNRGKDTSLFGVL 363
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERL 380
N T T+ MG R+L +L PL+D EI R D V+ F+ ++A+R LR L + DIER+
Sbjct: 364 NDTKTS-MGTRILKKFLTSPLIDKEEIERRHDAVEYFLTNSAVRYQLRGLLHKFPDIERI 422
Query: 381 MHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLN 440
+ AG + ++ L + I++P I+ + + +LI E S++ + L
Sbjct: 423 AGRISYGNAGPRDLITLKNALIKIPEIKFLINPPSEKLPALISE-------SVSGAEALT 475
Query: 441 KFIALVETSVDLDQ--LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
+ L+E++++ + L +I SY++ L L+ S + I + +
Sbjct: 476 EVTELIESAINDEPPVLARTGGVIRDSYNSELDELRETAYSGKNWIAEFQQSERERTGI- 534
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
K+LK+ FG+ +TK + +++ +T +G ++T L++
Sbjct: 535 --KSLKVGYNKVFGYYIEVTKSNIGLV----PPEYLRKQTMSNGERYTLPVLQEKESLIS 588
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
E+ + EL N +I + + + + LDV +F +++ Y RP I
Sbjct: 589 NAEEKLLALELELFNNLILSLTKAVPAIQKTSGHIGLLDVYAAFGNVSDL--YNYKRPVI 646
Query: 619 NPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
+ G +I+ RHP VE +F+PND L IITG NM GKST++RQV +
Sbjct: 647 E--NSGRLIISDGRHPVVERNMDSSFVPNDSGLESDGDQILIITGANMAGKSTYMRQVAL 704
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
+MAQ G FVP A I + D IF RVGA D G STFM EMLE A+IL TD+SL
Sbjct: 705 ITVMAQAGCFVPAAGAVIGIVDRIFTRVGAFDDLSSGQSTFMVEMLELANILNNITDKSL 764
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP--TLFATHFHELTALAHENANEFNTKQ 796
+I+DE+GRGTST DG+ +A A+ E+L ++ TLFATHFHE+ + E
Sbjct: 765 VILDEIGRGTSTLDGYSIAKAVLEYLHSRSKSGPRTLFATHFHEMVGMEGE--------- 815
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
+ V NYH + ++ T R + L K+ PGA D+S+GIHV + A P V+ A E
Sbjct: 816 LKRVKNYHFA--VNETGRDVVFLRKIIPGATDRSYGIHVVKLAGIPNRVLERASE 868
>gi|387787015|ref|YP_006252111.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
gi|379133416|dbj|BAL70168.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
Length = 849
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 226/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
+VD + E G MI +D L + E S I + +Q +
Sbjct: 397 AVDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|450010873|ref|ZP_21828835.1| DNA mismatch repair protein MutS [Streptococcus mutans A19]
gi|450023558|ref|ZP_21830673.1| DNA mismatch repair protein MutS [Streptococcus mutans U138]
gi|449189860|gb|EMB91480.1| DNA mismatch repair protein MutS [Streptococcus mutans A19]
gi|449193165|gb|EMB94556.1| DNA mismatch repair protein MutS [Streptococcus mutans U138]
Length = 849
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 217/680 (31%), Positives = 341/680 (50%), Gaps = 54/680 (7%)
Query: 203 SECKTLRDALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL 261
SE L+ G L+E ++ F K +L+ ++ V V + D + E+A A
Sbjct: 163 SEVLNLKTRELVIGFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLNDQLKAIELA--AA 220
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMN 321
G LL Y + Y + Y+++ A +L++LE+ K+ SL+ L++
Sbjct: 221 GKLLQYVHNTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLD 280
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
T TA MG RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL
Sbjct: 281 ETKTA-MGTRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLA 339
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLN 440
+ +A + +++L Q+ ++P I++ L+ + LESL + D L
Sbjct: 340 SRVSFGKANPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLP 388
Query: 441 KFIALVETSVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTAS 493
+ AL+ +++D + E G MI +D L + E S I + +Q +
Sbjct: 389 ELEALIRSAIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSG 446
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
LK+D + G+ F +T + F T K+ +F +L K+
Sbjct: 447 I------STLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKI 496
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
+ + EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y
Sbjct: 497 EGEMLEAREESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHY 554
Query: 614 TRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
RP N +I +E RH VE +IPN + K+ Q+ITGPNM GKST+
Sbjct: 555 VRPSFNHQQ--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTY 611
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQ+ + ++MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K
Sbjct: 612 MRQLALTVIMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKA 671
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT SLI+ DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L
Sbjct: 672 ATPNSLILFDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL-------- 723
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+ ++ + N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A
Sbjct: 724 -STRLTSLVNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHI 780
Query: 853 AAELEDFTPSAVISDDAKIE 872
+LE SA +S + K E
Sbjct: 781 LVDLEKM--SAAVSVNLKNE 798
>gi|397650621|ref|YP_006491148.1| DNA mismatch repair protein MutS [Streptococcus mutans GS-5]
gi|449955937|ref|ZP_21809353.1| DNA mismatch repair protein MutS [Streptococcus mutans 4VF1]
gi|449994773|ref|ZP_21822700.1| DNA mismatch repair protein MutS [Streptococcus mutans A9]
gi|450120898|ref|ZP_21865985.1| DNA mismatch repair protein MutS [Streptococcus mutans ST6]
gi|450127820|ref|ZP_21868765.1| DNA mismatch repair protein MutS [Streptococcus mutans U2A]
gi|450139692|ref|ZP_21872619.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML1]
gi|392604190|gb|AFM82354.1| DNA mismatch repair protein MutS [Streptococcus mutans GS-5]
gi|449170870|gb|EMB73560.1| DNA mismatch repair protein MutS [Streptococcus mutans 4VF1]
gi|449184933|gb|EMB86842.1| DNA mismatch repair protein MutS [Streptococcus mutans A9]
gi|449229792|gb|EMC29087.1| DNA mismatch repair protein MutS [Streptococcus mutans ST6]
gi|449230235|gb|EMC29502.1| DNA mismatch repair protein MutS [Streptococcus mutans U2A]
gi|449232637|gb|EMC31740.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML1]
Length = 849
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLNDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|450072842|ref|ZP_21848815.1| DNA mismatch repair protein MutS [Streptococcus mutans M2A]
gi|449210723|gb|EMC11158.1| DNA mismatch repair protein MutS [Streptococcus mutans M2A]
Length = 849
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 226/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
+VD + E G MI +D L + E S I + +Q +
Sbjct: 397 AVDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|317472765|ref|ZP_07932077.1| DNA mismatch repair protein MutS [Anaerostipes sp. 3_2_56FAA]
gi|316899757|gb|EFV21759.1| DNA mismatch repair protein MutS [Anaerostipes sp. 3_2_56FAA]
Length = 872
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 345/675 (51%), Gaps = 46/675 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
A GALL Y L + N N+ + Y YM +DS++ R L + E+ D K SL
Sbjct: 236 ATGALLLY--LHETQKNALNHLMSVSPYETSEYMIIDSSSRRNLELCETLRDKKKKGSLL 293
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
G++++T TA MG RLL ++QPL+D +I R D + + R+++R++L + D+
Sbjct: 294 GVLDKTKTA-MGARLLRSMIEQPLIDRVKIEERYDALTSLTKQAIAREEIREYLNPVYDL 352
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERLM + + + ++ L S LP I++ L++ S ++E L++L D
Sbjct: 353 ERLMTKVSYQTINPRDMIALKVSLQWLPPIKTILEECGDSLLSGLRE----DLDTLEDVA 408
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
L + L E S+ + E G +I + + LK + ++ + L ++ +
Sbjct: 409 GLLEDAILEEPSIAVK--EGG--IIKDGFSEQIDQLKRAKTDGKQWLMQLEERERRATGI 464
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
K LK+ FG+ +T + K+ +I +T + ++T +L KL D
Sbjct: 465 ---KTLKVKFNKVFGYYLDVTNS----YKDKVPEHYIRKQTLTNSERYTTEELNKLADTI 517
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ + E + +T E K A +++ LDVL S A +A Y RP
Sbjct: 518 LGAEDRLCALEYETFASIRETLAGEMERIKKTAGVIAYLDVLCSLACVAEQ--NGYVRPK 575
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
+N + DI + RHP VE Q N FI ND L + IITGPNM GKST++RQ
Sbjct: 576 LNTKGLIDI--KEGRHPVVE-QMMSNDMFISNDTYLDSKRHRVSIITGPNMAGKSTYMRQ 632
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
+ +LMAQ+GSFVP +A+I + D IF RVGA D G STFM EM E A+IL+ AT
Sbjct: 633 SALIVLMAQIGSFVPAQKANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNATK 692
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFN 793
SL+I+DE+GRGTSTYDG +AWA+ E++ + A TLFATH+HELT L
Sbjct: 693 DSLLILDEIGRGTSTYDGLSIAWAVVEYISNPKLLGAKTLFATHYHELTELEG------- 745
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
++ V NY ++ + + L K+ G D+S+GI VA+ A P+ V+ A+E
Sbjct: 746 --KIGSVNNYCIA--VKEQGDNIVFLRKIVKGGADKSYGIQVAKLAGVPDMVIQRAKEIV 801
Query: 854 AELEDFTPSAVISDDAKIEVGSKRKRIS-DPNDMSRGAARAHQFLKEFSDMPLETMDLKE 912
+EL D S ++S KI+V S+ +++S ND H F+ E L +M E
Sbjct: 802 SELSD---SDIVSQAQKIQVSSEPQQLSLFANDSE--PMMEHPFMAEIRKKDLSSMTPLE 856
Query: 913 ALERVKRMKDDLEKD 927
AL + +++ L ++
Sbjct: 857 ALNYLYILQNRLREE 871
>gi|291288723|ref|YP_003505539.1| DNA mismatch repair protein MutS [Denitrovibrio acetiphilus DSM
12809]
gi|290885883|gb|ADD69583.1| DNA mismatch repair protein MutS [Denitrovibrio acetiphilus DSM
12809]
Length = 854
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 301/583 (51%), Gaps = 41/583 (7%)
Query: 288 DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
D + LDS A+ L ++++ D ++ +L+ ++N T T MG R L WL PL + N I
Sbjct: 248 DERVYLDSVAISTLELVKNSRDGSEKDTLYSVLNHTNTT-MGARTLKKWLLSPLRNTNTI 306
Query: 348 NARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYI 407
R +I++ F+++ LR L+R+ DIER+ L R + +V L S+ P I
Sbjct: 307 LRRQEIIEFFINNQTTADALRDQLERVYDIERITTRLSANRCNARDLVWLKNSTETFPTI 366
Query: 408 RSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD----LDQLENGEYMIS 463
+ L E + + E + D LN L+E++++ + E G +I
Sbjct: 367 KYMLSSCENPHIADLTEEF----------DDLNDITVLIESAIEDEPPVTITEGG--LIK 414
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
++ + LK+ +E+ + + + + + + +LK+ FG+ I+K
Sbjct: 415 KGFNPEVDELKDIKENSRQILLKIESEQRAKTGI---SSLKVKFNKVFGYYIEISKAYLN 471
Query: 524 KIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
++ ++ T + +T + +F +LK+L ++ N + E+ + + + +
Sbjct: 472 RVPEEYTRK----QTLVNAERFIIPELKELEEKILHADSRLVNLEYEIFSEIRRQVSESA 527
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN 643
+S A +SELD LLS A A Y +P + D DI + RHP VE
Sbjct: 528 ARLRSSAATISELDCLLSLAKTA--VQNDYRKPLVG--DFDDIKITEGRHPVVEKNINSA 583
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
++PND ++ ++ IITGPNM GKST++R + LMA +GS+VP A I + D IF
Sbjct: 584 YVPNDIEMDINRNKLTIITGPNMAGKSTYLRMCALITLMAHIGSYVPASEAEIGIVDRIF 643
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
RVGA D G STFM EM+E A+IL ATD+SLII+DELGRGTST+DG +AW++ E+
Sbjct: 644 TRVGASDNLAGGESTFMVEMVEAANILNNATDKSLIILDELGRGTSTFDGVSIAWSVAEY 703
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
+ + I A TLFATH+HELT ++ T Q V V H +L + KV
Sbjct: 704 IADHINAKTLFATHYHELTDISL-------TTQGVRNCATEVVEH----EGELIFMRKVR 752
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELE--DFTPSAV 864
PG D+S+GIHVAE A P+ V+T A + LE + +P +
Sbjct: 753 PGTADKSYGIHVAELAGLPKEVITRANDILRNLEKNELSPQGI 795
>gi|189424210|ref|YP_001951387.1| DNA mismatch repair protein MutS [Geobacter lovleyi SZ]
gi|254766629|sp|B3E6P2.1|MUTS_GEOLS RecName: Full=DNA mismatch repair protein MutS
gi|189420469|gb|ACD94867.1| DNA mismatch repair protein MutS [Geobacter lovleyi SZ]
Length = 872
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 209/578 (36%), Positives = 307/578 (53%), Gaps = 42/578 (7%)
Query: 288 DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
+ ++ LD A R L + + TD K+ SL G ++RT TA MG R L WL PL+ V I
Sbjct: 267 NDHLALDPATRRNLELTATMTDNKKSGSLLGCLDRTATA-MGARTLKQWLSYPLVQVAPI 325
Query: 348 NARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYI 407
RL+ V+ ++ AL+ LR+ LK + D+ERL + AG + + L+ S ++P I
Sbjct: 326 RRRLEAVEELKENPALQDQLREQLKGVHDLERLNGRVSMAGAGGRDLRSLHDSLEQVPQI 385
Query: 408 RSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYD 467
R AL + + E LDPL+ + +N+ IA + E G +I+ Y
Sbjct: 386 RLALTEATAPLLRDLTEE-LDPLQDIRS--LINQAIA---PAPPFSLREGG--IIADGYH 437
Query: 468 TGLSALKNEQESLERQIHS-LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L L+ ++ R+ + + A + D +LK+ FG+ +TK +
Sbjct: 438 AELDELR----AISREGKGYIARMEAQERDRTGISSLKIRYNKVFGYYIEVTKSNLSSV- 492
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL-EEYKNCQKE--LVNRVIQTAVTFS 583
+I +T G ++ +LK +KVL E + C+ E L V +
Sbjct: 493 ---PDNYIRRQTIATGERYITEELKSY---EEKVLGAEDRICELEYTLFQEVRERTAAQG 546
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW-V 642
A+ L+ LDVL S A +A Y +P ++ D +II EG RHP VEA +
Sbjct: 547 GRVSRTASALASLDVLASLALVAQE--RDYCKPVVDDGDTLEII-EG-RHPVVEAMNLGE 602
Query: 643 NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCI 702
F+PND +L + + +ITGPNM GKST++RQV + LMAQVGSFVP RA+I + D I
Sbjct: 603 RFVPNDTRLDQEQHQLLMITGPNMAGKSTYMRQVALITLMAQVGSFVPASRATIGIADQI 662
Query: 703 FARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICE 762
F RVGAGD RG STFM EM+ETA IL+ AT +SL+++DE+GRGTST+DG +AWA+ E
Sbjct: 663 FTRVGAGDNLARGQSTFMVEMMETAHILRSATTKSLVVLDEIGRGTSTFDGLSIAWAVAE 722
Query: 763 HL--VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
+L +A TLFATH+HEL LA T++ G+ N V+ + + ++ L
Sbjct: 723 YLHDTNHCKARTLFATHYHELADLA-------ATRE--GITNLTVA--VKEWNDQVIFLR 771
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
+ PGA S+GI VA A P +V+ A+E LE+
Sbjct: 772 TIIPGAASHSYGIQVARLAGMPRNVIERAKEVLKTLEE 809
>gi|304316821|ref|YP_003851966.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778323|gb|ADL68882.1| DNA mismatch repair protein MutS [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 857
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 194/580 (33%), Positives = 313/580 (53%), Gaps = 43/580 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDAN-KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
Y +S+M LD+ ++ L +++S N ++ +L ++++T T MG RLL W+++PL+D
Sbjct: 258 YEDNSFMLLDNNTIKNLEIVQSPNRNNSRDGTLLSVLDQTVTP-MGGRLLKRWIEEPLID 316
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+ +IN RLD V +D R DLR LK I D+ERL L + + ++ + S R
Sbjct: 317 IEKINLRLDSVDELFNDFKGRSDLRNALKGIYDLERLSSKLVYQNINAKDLLSIKVSIER 376
Query: 404 LPYIRSALQQYEGQFSSLIKERYL--DPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
LP I+ + +Y + +KE +L D L+ + D L++ S+ + ++ G
Sbjct: 377 LPKIKDLISKYNSIY---LKEIFLKLDTLQDIYD---------LIDKSIKDEPSTSVKEG 424
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I +D + L+ + + I +L + K LK+ FG+ ++
Sbjct: 425 N-IIKDGFDKNVDELRKAATNGKSWITNLELNEKERTGI---KTLKVGYNKVFGYFIEVS 480
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K + + +I +T + ++ +LK++ ++ + + E+ N + +
Sbjct: 481 KSYISSVPQ----NYIRKQTLANAERYITPELKEIEEKILGAETKLVELEYEIFNGIREQ 536
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ + ++ LDVL S A +A S Y +P +N D I+++ RHP +E
Sbjct: 537 IKNEINRIQMTSKYIAVLDVLTSLAMVAES--NNYVKPIVNDGD--RILIKDGRHPVIET 592
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
+FI ND + I K IITGPNM GKST++RQV + +LMAQVGSFVP A I +
Sbjct: 593 IVDDSFISNDIE-IDEKKPIMIITGPNMAGKSTYMRQVALIVLMAQVGSFVPASYAEIGI 651
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF RVGA D G STFM EM E + IL AT +SLII+DE+GRGTSTYDG +A
Sbjct: 652 VDRIFTRVGASDDLFSGQSTFMVEMNEVSVILNSATQKSLIILDEVGRGTSTYDGMSIAC 711
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
AI E++ ++I+A T+FATH+HELT L + Q+ G+ NY++S +D T+ ++
Sbjct: 712 AILEYIHDKIKAKTMFATHYHELTKLEN---------QLNGIKNYNIS--VDETNDEIIF 760
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
L K+ PG+ D+S+GI VA+ A P V+ A++ LE+
Sbjct: 761 LRKIIPGSADKSYGIQVAKLAGLPNDVIDNAKKILNSLEN 800
>gi|434388178|ref|YP_007098789.1| DNA mismatch repair protein MutS [Chamaesiphon minutus PCC 6605]
gi|428019168|gb|AFY95262.1| DNA mismatch repair protein MutS [Chamaesiphon minutus PCC 6605]
Length = 867
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 203/621 (32%), Positives = 321/621 (51%), Gaps = 42/621 (6%)
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
F +A A G LL Y E + +R YSL Y+ LD + R L + ++ D +
Sbjct: 272 FPLAVRAAGGLLEYLEATQKGNPVTLQPLRTYSLGDYLVLDHQSRRNLEITQTVRDNHFQ 331
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL +++TCTA MG R L W+ QPLLD++ I R D +Q V+ T LRQDL+Q LK+
Sbjct: 332 GSLLWALDKTCTA-MGGRALRRWVLQPLLDLHSITKRQDTIQELVEHTFLRQDLQQLLKQ 390
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
I DIERL RA + +V L S ++LP + + Q + F ++ + LE+L
Sbjct: 391 IYDIERLTGKAASGRANARDLVALADSFLKLPELANIASQGKSPFLKILHHVPAE-LEAL 449
Query: 434 TDDDHLNKFIA-LVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
K +A LVE L+ G +I S D L L+ + I +L
Sbjct: 450 G-----QKIVAHLVEHPPQ--HLKEGG-LIRSGIDPQLDELRASAAEDHQWIANLE---V 498
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+ D LK+ FG+ I++ + ++ +I +T + ++ +LK+
Sbjct: 499 IERDRTGIANLKVGFNKTFGYYISISRLKADQV----PGDYIRKQTLTNEERYITPELKE 554
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
+ ++ + E+ + T +E +++A +S +DVL +++A++
Sbjct: 555 REVRILTAQDDLNRIEHEIFLELRATVAAHTEQIRTIARSISAIDVLCGLSEIAAT--QG 612
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEAQDWVNF-IPNDCKLIRGKSW--------FQIITG 663
Y RP + P +I + RHP VE F +PN +L + + I+TG
Sbjct: 613 YCRPQMVPSR--EIHITDGRHPVVEKALLAGFFVPNSTQLGQAEHITATVEHPDLIILTG 670
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PN GKS ++RQ+G+ +MAQ+GSF+P A++ + D IF RVGA D G STFM EM
Sbjct: 671 PNASGKSCYLRQLGLIQIMAQIGSFIPATAATLGICDRIFTRVGAVDDLATGQSTFMVEM 730
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
ETA+IL AT SL+++DE+GRGT+T+DG +AWA+ E+L EIR+ T+FATH+HEL
Sbjct: 731 NETANILNHATPNSLVLLDEIGRGTATFDGLSIAWAVAEYLATEIRSRTIFATHYHELNE 790
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LA N VANY V+ + ++ L++V+PG +S+GI A P
Sbjct: 791 LASILPN---------VANYQVT--VKELPDQIIFLHQVQPGGASKSYGIEAGRLAGLPP 839
Query: 844 SVVTLAREKAAELEDFTPSAV 864
+V++ AR+ +++E+ + A+
Sbjct: 840 TVISRARQVMSQIEEHSKIAI 860
>gi|449896268|ref|ZP_21789561.1| DNA mismatch repair protein MutS [Streptococcus mutans R221]
gi|449989438|ref|ZP_21821053.1| DNA mismatch repair protein MutS [Streptococcus mutans NVAB]
gi|450046201|ref|ZP_21838823.1| DNA mismatch repair protein MutS [Streptococcus mutans N34]
gi|449182552|gb|EMB84572.1| DNA mismatch repair protein MutS [Streptococcus mutans NVAB]
gi|449199233|gb|EMC00311.1| DNA mismatch repair protein MutS [Streptococcus mutans N34]
gi|449262451|gb|EMC59900.1| DNA mismatch repair protein MutS [Streptococcus mutans R221]
Length = 849
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 357/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISERQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F ++L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTSELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|46446855|ref|YP_008220.1| DNA mismatch repair protein MutS [Candidatus Protochlamydia
amoebophila UWE25]
gi|81697634|sp|Q6MBV4.1|MUTS_PARUW RecName: Full=DNA mismatch repair protein MutS
gi|46400496|emb|CAF23945.1| putative DNA mismatch repair protein mutS [Candidatus
Protochlamydia amoebophila UWE25]
Length = 858
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 256/871 (29%), Positives = 411/871 (47%), Gaps = 75/871 (8%)
Query: 2 DDEQNKLPELKLDAKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTYYHT 61
D EQ+ L E K+ + K + D A+ FF D+Y A E+A ++K T
Sbjct: 14 DFEQHSLDESKISPMMMQWHAC--KKMAGD--AILFFRMGDFYEAFYEDAHLLSKELELT 69
Query: 62 TTALRQLGTG------SDALSSVSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVK 115
T +++ S+ V+K IA + + L E R+V
Sbjct: 70 LTKRQEIPMSGIPFHTSEGYIDKLVAKGFRVAIAEQIEDPKKTKGLVKREVV----RVVS 125
Query: 116 SGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDD 175
GT N D NN F + G GL ++DLT ++EF +
Sbjct: 126 PGTVINSSLLSD---KNNN---------FFAALVKVGQIFGLAFLDLTTGEYWVSEFTQE 173
Query: 176 SHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQD 235
N L L E L +E K + ++ + +F+ + Q
Sbjct: 174 RELLN---ELYRLHPAE-FLTSEKFKEKHASLFEEMQQTYSFLVNTLEDWQFEHQ---QA 226
Query: 236 LDRLVRG-SVEPVRDL-VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRL 293
D L+ V+ + +SG A A GALL+Y + IR YS +M L
Sbjct: 227 HDFLINHFKVQRLDGFGLSGMVAAINAAGALLNYLQETLCLPIQHIQSIRCYSSSQFMML 286
Query: 294 DSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDI 353
D R L + S D ++ +L G++++T T MG RL+H W+KQPLL V+EI+ R +
Sbjct: 287 DRMTQRNLELTHSLQDGSRRHTLLGVIDQTQTP-MGARLMHHWVKQPLLKVSEIHQRQNG 345
Query: 354 VQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQ 413
+QA ++ + L+ +I DIERLM + A + ++ L+ S + +I+S L
Sbjct: 346 IQALLNHEHIVDQLQNLFLQIKDIERLMMKVSACYATPRDLIALHFSFKPIAFIKSLLLN 405
Query: 414 YEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS-VDLDQLENGE-YMISSSYDTGLS 471
++ + ++ LDP L+K AL+ + V+ L GE + L
Sbjct: 406 IPSEWINEHAQK-LDP---------LSKMNALISNAIVEEPPLRLGEGKTFRQGFHRELD 455
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + + Q + + K LK+ FG+ +++ + K+
Sbjct: 456 ELREISHDSKAWMARYQTQIREETGI---KTLKVGFNKMFGYFIEVSRGQ----IDKMPD 508
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
FI +T + ++ +LK+ + E + + EL +++ ++++ +A
Sbjct: 509 HFIRRQTLVNAERYITPELKEYESKVLTAEERINSIESELFHQLRLEVASYTKNVLEVAQ 568
Query: 592 MLSELDVLLSFADLASS-CPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDC 649
L+++D L+S ++A C YT P I+ D +++E RHP +E FIPND
Sbjct: 569 ALAKIDCLISLTNVAKKYC---YTCPVID--DSSILVIEEGRHPVIETVCRHEKFIPNDT 623
Query: 650 KLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAG 709
L + +ITGPNM GKST++RQV + +++AQ+GSFVP +A I + D +F R+GA
Sbjct: 624 YLDDQANRLLLITGPNMAGKSTYLRQVALIVILAQIGSFVPAAKAHIGIIDKVFTRIGAS 683
Query: 710 DCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EE 767
D RG STFM EM ETA+IL AT +SL+I+DE+GRGTSTYDG +AW++ E+L+ E+
Sbjct: 684 DDLSRGQSTFMVEMTETANILNNATSQSLVILDEIGRGTSTYDGISIAWSVAEYLLTTEK 743
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGAC 827
A TLFATH+ ELT L +++ G NY+V+ H +T L K+ G
Sbjct: 744 RMAKTLFATHYWELTKLE---------EKVPGAVNYNVAVH--EADDHITFLRKIIKGGT 792
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELED 858
D+S+GIHVA A P++V+ ++E LE+
Sbjct: 793 DKSYGIHVARLAGLPQAVLNRSKEILEHLEE 823
>gi|449947081|ref|ZP_21807192.1| DNA mismatch repair protein MutS [Streptococcus mutans 11SSST2]
gi|449169045|gb|EMB71834.1| DNA mismatch repair protein MutS [Streptococcus mutans 11SSST2]
Length = 849
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STKLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|260587680|ref|ZP_05853593.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|331084031|ref|ZP_08333138.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541945|gb|EEX22514.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|330402393|gb|EGG81963.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
6_1_63FAA]
Length = 904
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 317/627 (50%), Gaps = 50/627 (7%)
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDAN 311
+ A A GAL +Y LL + N + I YS D YM +DS+ R L + E+ +
Sbjct: 252 YNCAVIAAGALFTY--LLETQKNSMEHLRQITPYSTDKYMLIDSSTRRNLELTETMREKV 309
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL ++++T TA MG R++ +++QPL+D EINARLD V+ R+++R++L
Sbjct: 310 KRGSLLWVLDKTKTA-MGARMMRSFIEQPLIDEGEINARLDAVEEINCHEMDREEIREYL 368
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
+ D+ERL+ + + A + ++ S +PYIR L Q++ + + E
Sbjct: 369 SPVYDMERLISRVSYQSANPRDLISFKSSISMIPYIRQLLSQFQCEELQKVYEEM----- 423
Query: 432 SLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
D L L+E S+ L E G +I Y + + + + + L
Sbjct: 424 -----DDLQDLYQLLEASIVDEPPLAMKEGG--IIKEGYQEDIDHFREAKTKGKVWLAEL 476
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
+ + + LK+ FG+ +T + + T + +T + ++
Sbjct: 477 EAEEKEKTGI---RTLKIKYNKVFGYYLEVTNSFKDMVPDYYTRK----QTLTNAERYIT 529
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+LK+L D ++ + E + E + A +++LD S A +AS
Sbjct: 530 PRLKELEDMILGAEDKLYALEYEAFVSIRTKIAAEVERIQKTARAIAKLDAYASLALVAS 589
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRGKSWFQIITGP 664
+ RP IN V DI + RHP VE + D FIPND L GK+ +ITGP
Sbjct: 590 R--NQFVRPKINTKGVIDI--KNGRHPVVEKMISNDM--FIPNDTYLDNGKNRVAVITGP 643
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQ + +LMAQ+GSFVP ++A+I + D IF RVGA D G STFM EM
Sbjct: 644 NMAGKSTYMRQSALIVLMAQIGSFVPAEKANIGIVDRIFTRVGASDDLASGQSTFMVEMT 703
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELT 782
E A+IL+ AT +SL+I+DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT
Sbjct: 704 EVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVIEHISNTRILGAKTLFATHYHELT 763
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ GV NY ++ + + L K+ G D+S+GI VA+ A P
Sbjct: 764 ELEG---------KLAGVNNYCIA--VKERGDDIVFLRKIVKGGADKSYGIQVAKLAGVP 812
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDA 869
SV+ A+E EL +A + + A
Sbjct: 813 NSVIERAKELVEELVSADITATVKNIA 839
>gi|449876159|ref|ZP_21782633.1| DNA mismatch repair protein MutS [Streptococcus mutans S1B]
gi|449904938|ref|ZP_21792938.1| DNA mismatch repair protein MutS [Streptococcus mutans M230]
gi|449973522|ref|ZP_21814762.1| DNA mismatch repair protein MutS [Streptococcus mutans 11VS1]
gi|449179451|gb|EMB81662.1| DNA mismatch repair protein MutS [Streptococcus mutans 11VS1]
gi|449252967|gb|EMC50934.1| DNA mismatch repair protein MutS [Streptococcus mutans S1B]
gi|449258777|gb|EMC56337.1| DNA mismatch repair protein MutS [Streptococcus mutans M230]
Length = 849
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVERVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|450106968|ref|ZP_21860781.1| DNA mismatch repair protein MutS [Streptococcus mutans SF14]
gi|450132413|ref|ZP_21870043.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML8]
gi|449153190|gb|EMB56878.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML8]
gi|449222661|gb|EMC22380.1| DNA mismatch repair protein MutS [Streptococcus mutans SF14]
Length = 849
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|449886728|ref|ZP_21786393.1| DNA mismatch repair protein MutS [Streptococcus mutans SA41]
gi|449914234|ref|ZP_21795499.1| DNA mismatch repair protein MutS [Streptococcus mutans 15JP3]
gi|449936544|ref|ZP_21804032.1| DNA mismatch repair protein MutS [Streptococcus mutans 2ST1]
gi|450040377|ref|ZP_21836770.1| DNA mismatch repair protein MutS [Streptococcus mutans T4]
gi|450076207|ref|ZP_21849744.1| DNA mismatch repair protein MutS [Streptococcus mutans N3209]
gi|450153979|ref|ZP_21877477.1| DNA mismatch repair protein MutS [Streptococcus mutans 21]
gi|449158390|gb|EMB61807.1| DNA mismatch repair protein MutS [Streptococcus mutans 15JP3]
gi|449165514|gb|EMB68518.1| DNA mismatch repair protein MutS [Streptococcus mutans 2ST1]
gi|449199018|gb|EMC00103.1| DNA mismatch repair protein MutS [Streptococcus mutans T4]
gi|449212791|gb|EMC13142.1| DNA mismatch repair protein MutS [Streptococcus mutans N3209]
gi|449238250|gb|EMC37024.1| DNA mismatch repair protein MutS [Streptococcus mutans 21]
gi|449253805|gb|EMC51743.1| DNA mismatch repair protein MutS [Streptococcus mutans SA41]
Length = 849
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 217/680 (31%), Positives = 341/680 (50%), Gaps = 54/680 (7%)
Query: 203 SECKTLRDALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL 261
SE L+ G L+E ++ F K +L+ ++ V V + D + E+A A
Sbjct: 163 SEVLNLKTRELVIGFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AA 220
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMN 321
G LL Y + Y + Y+++ A +L++LE+ K+ SL+ L++
Sbjct: 221 GKLLQYVHNTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLD 280
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
T TA MG RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL
Sbjct: 281 ETKTA-MGTRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLA 339
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLN 440
+ +A + +++L Q+ ++P I++ L+ + LESL + D L
Sbjct: 340 SRVSFGKANPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLP 388
Query: 441 KFIALVETSVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTAS 493
+ AL+ +++D + E G MI +D L + E S I + +Q +
Sbjct: 389 ELEALIRSAIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSG 446
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
LK+D + G+ F +T + F T K+ +F +L K+
Sbjct: 447 I------STLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKI 496
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
+ + EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y
Sbjct: 497 EGEMLEAREESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHY 554
Query: 614 TRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
RP N +I +E RH VE +IPN + K+ Q+ITGPNM GKST+
Sbjct: 555 VRPSFNHQQ--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTY 611
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQ+ + ++MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K
Sbjct: 612 MRQLALTVIMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKA 671
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT SLI+ DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L
Sbjct: 672 ATPNSLILFDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL-------- 723
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+ ++ + N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A
Sbjct: 724 -STRLTSLVNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHI 780
Query: 853 AAELEDFTPSAVISDDAKIE 872
+LE SA +S + K E
Sbjct: 781 LVDLEKM--SAAVSVNLKNE 798
>gi|449911081|ref|ZP_21795000.1| DNA mismatch repair protein MutS [Streptococcus mutans OMZ175]
gi|449258712|gb|EMC56276.1| DNA mismatch repair protein MutS [Streptococcus mutans OMZ175]
Length = 849
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|450088206|ref|ZP_21854685.1| DNA mismatch repair protein MutS [Streptococcus mutans NV1996]
gi|449216755|gb|EMC16847.1| DNA mismatch repair protein MutS [Streptococcus mutans NV1996]
Length = 849
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIESGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTNL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|290581355|ref|YP_003485747.1| DNA mismatch repair protein [Streptococcus mutans NN2025]
gi|449864684|ref|ZP_21778542.1| DNA mismatch repair protein MutS [Streptococcus mutans U2B]
gi|449869471|ref|ZP_21780118.1| DNA mismatch repair protein MutS [Streptococcus mutans 8ID3]
gi|449932949|ref|ZP_21803054.1| DNA mismatch repair protein MutS [Streptococcus mutans 3SN1]
gi|450005598|ref|ZP_21826759.1| DNA mismatch repair protein MutS [Streptococcus mutans NMT4863]
gi|450030663|ref|ZP_21833354.1| DNA mismatch repair protein MutS [Streptococcus mutans G123]
gi|450051790|ref|ZP_21841027.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM1]
gi|450058934|ref|ZP_21843297.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML4]
gi|450068238|ref|ZP_21847049.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML9]
gi|450092543|ref|ZP_21856048.1| DNA mismatch repair protein MutS [Streptococcus mutans W6]
gi|450100399|ref|ZP_21858755.1| DNA mismatch repair protein MutS [Streptococcus mutans SF1]
gi|450116656|ref|ZP_21864596.1| DNA mismatch repair protein MutS [Streptococcus mutans ST1]
gi|450149199|ref|ZP_21876037.1| DNA mismatch repair protein MutS [Streptococcus mutans 14D]
gi|450164012|ref|ZP_21881083.1| DNA mismatch repair protein MutS [Streptococcus mutans B]
gi|450171968|ref|ZP_21884324.1| DNA mismatch repair protein MutS [Streptococcus mutans SM4]
gi|254998254|dbj|BAH88855.1| DNA mismatch repair protein [Streptococcus mutans NN2025]
gi|449158184|gb|EMB61606.1| DNA mismatch repair protein MutS [Streptococcus mutans 8ID3]
gi|449160796|gb|EMB64037.1| DNA mismatch repair protein MutS [Streptococcus mutans 3SN1]
gi|449188389|gb|EMB90101.1| DNA mismatch repair protein MutS [Streptococcus mutans NMT4863]
gi|449192615|gb|EMB94030.1| DNA mismatch repair protein MutS [Streptococcus mutans G123]
gi|449201604|gb|EMC02594.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM1]
gi|449203589|gb|EMC04446.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML4]
gi|449207233|gb|EMC07911.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML9]
gi|449218096|gb|EMC18118.1| DNA mismatch repair protein MutS [Streptococcus mutans W6]
gi|449220472|gb|EMC20342.1| DNA mismatch repair protein MutS [Streptococcus mutans SF1]
gi|449226760|gb|EMC26251.1| DNA mismatch repair protein MutS [Streptococcus mutans ST1]
gi|449234922|gb|EMC33908.1| DNA mismatch repair protein MutS [Streptococcus mutans 14D]
gi|449242469|gb|EMC41055.1| DNA mismatch repair protein MutS [Streptococcus mutans B]
gi|449243285|gb|EMC41730.1| DNA mismatch repair protein MutS [Streptococcus mutans SM4]
gi|449264755|gb|EMC62090.1| DNA mismatch repair protein MutS [Streptococcus mutans U2B]
Length = 849
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|206900896|ref|YP_002250799.1| DNA mismatch repair protein MutS [Dictyoglomus thermophilum H-6-12]
gi|206739999|gb|ACI19057.1| DNA mismatch repair protein MutS [Dictyoglomus thermophilum H-6-12]
Length = 853
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 309/574 (53%), Gaps = 33/574 (5%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y Y+ LDS A++ L +LE+ + + SL ++++T T+ MG RLL W+ QPLL+V
Sbjct: 256 YQPQQYLILDSTAIKHLELLETVREGQRRGSLIWVLDKTLTS-MGARLLKKWILQPLLNV 314
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I R ++ F++ R+++ LK + D+ER+ + A ++++ L Q+ L
Sbjct: 315 NAIKKRQGAIKEFLEKEPWRREIEDILKEMPDLERINSRINYNTATPKELIYLRQALSFL 374
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P +R +L++ E +KE D LE L ++ L++ ALVE+ +++G Y I
Sbjct: 375 PLLRKSLEKAESDRLKELKENLPD-LEPLYEE--LDR--ALVESPPS--HIKDGGY-IKD 426
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
YD L L+ + + +L + + K+LK+ FG+ +TK
Sbjct: 427 GYDPNLDELRRLLRESKDWLINLENRERERTGI---KSLKIGYNQVFGYYIEVTKAN--- 480
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
+ +I +T + +F +LK+ ++ + K ++EL + + + S
Sbjct: 481 -LNLVPPDYIRKQTLVNAERFITPELKEWENKILHAEDNIKKIEEELFQNLRKKVIEHSR 539
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVN 643
+ A ++ E+DV +S A A Y P + + D+I+ RHP +E
Sbjct: 540 DITTFAQIIGEIDVYISLAKAAREYN--YVCPQVT--NDYDVIIREGRHPVIERMLPPGT 595
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
F+PND L R K + +ITGPNM GKST+IRQ+ + I++AQ+GSF+P A I V D IF
Sbjct: 596 FVPNDAYLNREK-FIDLITGPNMAGKSTYIRQIALIIILAQMGSFIPAKEAKIGVVDRIF 654
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
R+GA D G STF+ EM E +IL AT+RSLII+DE+GRGTSTYDG +AWAI E+
Sbjct: 655 TRIGAWDDISSGESTFLVEMKEVGNILSHATERSLIILDEVGRGTSTYDGISIAWAIVEY 714
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
+ +I+A TLFATH+HELT L K++ + N +S + +++ L+K+
Sbjct: 715 IHNKIKAKTLFATHYHELTELE---------KELRHLKN--LSVAVQEKGKEIIFLHKIV 763
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
D+S+GI+VA+ A+ P V+ A + ELE
Sbjct: 764 DKPADKSYGIYVAQLADLPREVIERAEKILLELE 797
>gi|449969184|ref|ZP_21813059.1| DNA mismatch repair protein MutS [Streptococcus mutans 2VS1]
gi|449174304|gb|EMB76798.1| DNA mismatch repair protein MutS [Streptococcus mutans 2VS1]
Length = 849
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|450144043|ref|ZP_21873792.1| DNA mismatch repair protein MutS [Streptococcus mutans 1ID3]
gi|450159299|ref|ZP_21879377.1| DNA mismatch repair protein MutS [Streptococcus mutans 66-2A]
gi|449151249|gb|EMB54990.1| DNA mismatch repair protein MutS [Streptococcus mutans 1ID3]
gi|449241416|gb|EMC40048.1| DNA mismatch repair protein MutS [Streptococcus mutans 66-2A]
Length = 849
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|205373496|ref|ZP_03226299.1| DNA mismatch repair protein [Bacillus coahuilensis m4-4]
Length = 867
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 321/612 (52%), Gaps = 48/612 (7%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E A G LL+Y + S + Y++ +Y+++D + R L + E+ K
Sbjct: 217 EKAVQTAGRLLNYLSITQKRSLDHLQPVEWYNVMNYLKMDHYSKRNLELTETIRSKGKKG 276
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SL L++ T TA MG R L W+ +PL+++++I R +VQ ++ R+++R+ LK +
Sbjct: 277 SLLWLLDETMTA-MGGRRLKQWIDRPLINLSDIENRQKVVQLLLERFFEREEIREKLKEV 335
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
D+ERL + G + +V+L +S ++PY++ L + S + + LDP E LT
Sbjct: 336 YDLERLAGRVAFGNVGPRDLVQLKRSLTQIPYLQHILLSIDNNLSHDLANQ-LDPCEDLT 394
Query: 435 DDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
D L++ S+ D L+ G +I Y+ L ++ + + I L
Sbjct: 395 D---------LLDQSIVEDPPLSLKEGN-IICDGYNEELDQYRHASRNGKTWIAELQ--- 441
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKK-----EEPKIRKKLTTQFIVLETRKDGVKFT 546
AS+ + K+LK+ FG+ +TK EE + +K +T + +F
Sbjct: 442 ASERERTGIKSLKIGYNRVFGYYIEVTKANVHLLEEGRYDRK--------QTLSNAERFI 493
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
+LK+ + E+ + L + + F + LA ++SE+DVL FA ++
Sbjct: 494 TPELKEKESLILEAEEKSVELEYRLFQLIREQVKEFIPRLQKLAKLVSEVDVLQGFATIS 553
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPN 665
Y +P N +++E RHP VE + ++PN C + G+S +ITGPN
Sbjct: 554 EK--RQYVKPQFNQER--HLVIEDGRHPVVEKVMNAQEYVPNSCHM-NGESELLLITGPN 608
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST++RQV + ++AQ+G +VP A++ + D IF R+GA D + G STFM EMLE
Sbjct: 609 MSGKSTYMRQVALTSILAQIGCYVPATSANLPIFDQIFTRIGAADDLISGQSTFMVEMLE 668
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
+ + AT+ SLI+ DE+GRGTSTYDG LA AI E++ E I TLF+TH+HELT L
Sbjct: 669 ARNAITYATENSLILFDEIGRGTSTYDGMALAQAIIEYIHENIGCKTLFSTHYHELTVLE 728
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
+++ + N HVSA + K+ L+K++ G D+S+GIHVAE AN PES+
Sbjct: 729 ---------EKLSMLQNVHVSAM--EHNGKVVFLHKIKEGPADKSYGIHVAELANLPESL 777
Query: 846 VTLAREKAAELE 857
+ A+E LE
Sbjct: 778 IKRAKELLENLE 789
>gi|310828245|ref|YP_003960602.1| DNA mismatch repair protein MutS [Eubacterium limosum KIST612]
gi|308739979|gb|ADO37639.1| DNA mismatch repair protein MutS [Eubacterium limosum KIST612]
Length = 877
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/710 (31%), Positives = 347/710 (48%), Gaps = 55/710 (7%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLL-PTEAVKSSECKTLRDAL 212
TIGL Y+D++ + E + + + +G E L+ PT + KTL +
Sbjct: 135 TIGLAYLDISTGDFFVTEISGKNTLALLMDEVGKIGPSEILVNPTLFKDTGTIKTLEE-- 192
Query: 213 TRCGVM--LTERKKTEFKTRD--LVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYA 268
+ G+M L + EFK + L + D +++ R E + A GALL Y
Sbjct: 193 -KFGIMTNLYPARYFEFKASESRLKEQFDVYSLTALDLERR-----EHSVRAAGALLRYI 246
Query: 269 ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGM 328
+ ++ Y D YM LD + R L + E+ K SL ++++T TA M
Sbjct: 247 DETQKRVLTHINHVSYYKNDEYMILDLSTRRNLELTETIRSGEKKGSLLWVLDKTVTA-M 305
Query: 329 GKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRR 388
G R+L WL+ PLL+ I AR D+V+ +DL+ L ++ D+ER+ +
Sbjct: 306 GGRMLRRWLEAPLLEKKAIEARQDMVEELYRHPGALKDLKGVLGKVYDLERICGKISFGT 365
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET 448
+ ++ L QS LP +++ + G + + ++RY + D L L++
Sbjct: 366 CNPKDMLSLKQSVSALPLLQAF---FAGIDAPVFRKRY-------GEADLLTDIYELIDA 415
Query: 449 SVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKL 505
S+D + L++G+ +I Y+ + + E + I L + + K+LK+
Sbjct: 416 SIDDNAPFALKDGK-VIKRGYNEEIDGYREASEKGKDWIRDLELKERERTGI---KSLKV 471
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ ITK + +I +T + +F +LK++ + E
Sbjct: 472 KYNRVFGYFIEITKTN----LDQTPEDYIRKQTLANAERFFTPELKEMETRILGSEERLA 527
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI-NPPDVG 624
+ EL V + + + A ++E+D L S A +A + Y +P+I N P++
Sbjct: 528 QLEYELFQDVREKIIAQIARIQKRARDVAEIDALYSLAQVAIAGN--YVKPEITNGPELE 585
Query: 625 DIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
+E RHP VE +N F+ N C +ITGPNM GKST+IRQV V LMA
Sbjct: 586 ---IENGRHPVVEEIIGINHFVTNGCHFDGKDLRMMLITGPNMAGKSTYIRQVAVIALMA 642
Query: 684 QVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDE 743
Q+GSF+P D I + D IF RVGA D G STFM EM E ++ILK AT SL+I+DE
Sbjct: 643 QIGSFIPADSGRIGIVDRIFTRVGASDDLATGQSTFMVEMTEVSNILKNATQDSLVILDE 702
Query: 744 LGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
+GRGTST+DG +AWA+ E+L +E I A TLFATH+HELT L H G+
Sbjct: 703 IGRGTSTFDGISIAWAVVEYLWDEQIIGAKTLFATHYHELTELEHLKP---------GIK 753
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
N+ + + T + L K++PG+ DQS+GI VA A FP +V ARE
Sbjct: 754 NFSIG--VRETPEGVVFLRKIKPGSADQSYGIEVARLAGFPPAVTNRARE 801
>gi|291538969|emb|CBL12080.1| DNA mismatch repair protein MutS [Roseburia intestinalis XB6B4]
Length = 892
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 208/641 (32%), Positives = 324/641 (50%), Gaps = 52/641 (8%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNY-YIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+S + A GALL Y + +++ GN I YS YM +DS+ R L ++E+ +
Sbjct: 238 LSDYACGTIAAGALLRYL-YETQKNDLGNLSAIHPYSTGKYMIIDSSTRRNLELVETLRE 296
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
K SL ++++T TA MG R L +++QPL+D EI R + + D R++LR+
Sbjct: 297 KQKRGSLLWVLDKTKTA-MGARTLRAYVEQPLIDKTEIELRQEAIGELNDHVITREELRE 355
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
+L I D+ERL+ + R A + ++ S LP I+S L +++G I+
Sbjct: 356 YLNPIYDLERLITRVTYRTANPRDLIAFKNSISMLPPIKSLLDEFDGALLKNIQ------ 409
Query: 430 LESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
D D + + +LV+ S+ + E G +I Y+ + +N + + +
Sbjct: 410 ----NDIDAMEELCSLVDRSIMEEPPISVREGG--LIKEGYNEDVDKYRNAKTEGKTWLA 463
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
L + + K LK+ FG+ +T + + T + +T + ++
Sbjct: 464 ELEAKEREKTGI---KNLKIKYNKVFGYYLEVTNSYKDLVPDYFTRK----QTLANAERY 516
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELV----NRVIQTAVTFSEIFKSLATMLSELDVLLS 601
+LK+L D ++ + + +L N++ + V K++A LDV +S
Sbjct: 517 ITPELKELEDMILGAEDKLVSLEYDLFCEVRNKIAEEVVRIQRTAKAIAN----LDVFVS 572
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQI 660
A +A Y RP + V DI +G RHP VE + FI ND L G + I
Sbjct: 573 LAVVADQ--NNYCRPKMTNSGVIDI--KGGRHPVVEKMITNDMFIDNDTYLDNGNNRIAI 628
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQ + +LMAQ+GSFVP A IS+ D IF RVGA D G STFM
Sbjct: 629 ITGPNMAGKSTYMRQAALIVLMAQIGSFVPATSAKISIVDRIFTRVGASDDLASGQSTFM 688
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHF 778
EM E A+IL+ AT SL+++DE+GRGTST+DG +AWA+ EH+ + A TLFATH+
Sbjct: 689 VEMNEVANILRNATSNSLLVLDEIGRGTSTFDGLSIAWAVVEHISNPRLLGAKTLFATHY 748
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HELT L + N V NY ++ + + L K+ G D+S+GI VA+
Sbjct: 749 HELTELEGKLNN---------VHNYCIA--VKEKGDDIVFLRKIVQGGADKSYGIQVAKL 797
Query: 839 ANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR 879
A P+SV+ A+E EL ++V + G+K+K+
Sbjct: 798 AGVPDSVIERAKEIVEELSANDITSVTKNITPATAGTKKKK 838
>gi|164688070|ref|ZP_02212098.1| hypothetical protein CLOBAR_01715 [Clostridium bartlettii DSM
16795]
gi|164602483|gb|EDQ95948.1| DNA mismatch repair protein MutS [Clostridium bartlettii DSM 16795]
Length = 957
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 308/584 (52%), Gaps = 32/584 (5%)
Query: 275 SNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
SN N I Y+ +YM LD L + E+ K SL ++++T TA MG R+L
Sbjct: 251 SNINN--INVYNSSNYMVLDMFTRSNLELTETIRTKKKKGSLLHVLDKTSTA-MGGRMLR 307
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQI 394
++++PL+D I RLD+++ DD +LR DL + LK + DIER+ + + +++
Sbjct: 308 KYVEEPLVDKKRIQNRLDVIEEIKDDYSLRIDLIEILKNVYDIERICGKIAFEKVTPKEL 367
Query: 395 VKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ 454
+ L S +LP ++ ++ + + I + Y +E+L D L L E S+
Sbjct: 368 INLKNSIEKLPELKRRIEDSDAE----ILKNYAGKMETLDDIYDLIDRAILPEPSI---T 420
Query: 455 LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+++G +I SSY+ L L+ + I + + + K+LK+ FG+
Sbjct: 421 IKDGN-IIQSSYNEELRELREVSTNGAFMIKEIENREKEKTGV---KSLKIGFNKVFGYY 476
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
ITK + +I +T + ++ +LK + D+ E+ + EL +
Sbjct: 477 IEITKANLA--TANIDDSYIRKQTLSNAERYITEELKIIEDKILHAKEKIGVLEYELFVQ 534
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
V + + +++A +++ +DV SFA +A Y +P+IN + DI + RHP
Sbjct: 535 VRKYIYDNIDRIQNVAKIIANIDVFTSFATVAD--LNNYVKPNINDNNKLDI--KNGRHP 590
Query: 635 CVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE NF+PND L ++ IITGPNM GKST++RQ + +LMA +GSFVP D
Sbjct: 591 VVENIVGEENFVPNDTYLSDDENIINIITGPNMAGKSTYMRQSAIIVLMAHMGSFVPADF 650
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A I + D IF RVGA D G STFM EM E + ILK AT +S +I+DE+GRGTSTYDG
Sbjct: 651 ADIPICDRIFTRVGASDDLSSGQSTFMVEMNEVSQILKNATSKSFVILDEIGRGTSTYDG 710
Query: 754 FGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
LAWAI E++ I+ TLFATH+HELT L NEF V NY +S D +
Sbjct: 711 ISLAWAIVEYIQSNIKCKTLFATHYHELTDL----ENEFRE-----VKNYSISVKDDGEN 761
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ D+S+GI+VA+ A P+ V+ + E ++LE
Sbjct: 762 --IIFLRKIVEQPADKSYGIYVAKLAKLPDQVIERSSEILSDLE 803
>gi|450034423|ref|ZP_21834378.1| DNA mismatch repair protein MutS [Streptococcus mutans M21]
gi|450110638|ref|ZP_21862212.1| DNA mismatch repair protein MutS [Streptococcus mutans SM6]
gi|449196526|gb|EMB97791.1| DNA mismatch repair protein MutS [Streptococcus mutans M21]
gi|449224638|gb|EMC24264.1| DNA mismatch repair protein MutS [Streptococcus mutans SM6]
Length = 849
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 220/726 (30%), Positives = 353/726 (48%), Gaps = 75/726 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE +
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKMS 788
Query: 861 PSAVIS 866
+ ++
Sbjct: 789 AAVSVN 794
>gi|189030692|sp|A8MFD4.2|MUTS_ALKOO RecName: Full=DNA mismatch repair protein MutS
Length = 880
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 212/611 (34%), Positives = 322/611 (52%), Gaps = 56/611 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GAL+ Y + + I Y+ M LD + R L + E+ NK SL +
Sbjct: 241 ATGALIHYLKSTQKRTLSHINKINIYTFTEKMVLDISTRRNLELTETIRGKNKKGSLLWI 300
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R++ W+++PLL++ IN RL+ V +D LR +L++ LK+I D+ER
Sbjct: 301 LDKTQTA-MGGRMIRKWIEEPLLNIQNINRRLEAVATLKNDILLRCELKESLKQIYDLER 359
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + A + +V L +S LP I+ + +E + S L+KE L + D L
Sbjct: 360 LSGKIAFGSATPRDLVALKKSVAFLPDIK---KLFENENSGLLKEL-------LNNIDTL 409
Query: 440 NKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
AL+E+S+ LD+ L++G +I Y+ L L + H + K ++
Sbjct: 410 EDIQALIESSI-LDEPSISLKDGG-IIKEGYNDELDEL---YVAAREGKHWIAKLEQAEK 464
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTT---QFIVLETRKDGVKFTN 547
D K+LK+ FG+ ITK E IRK+ ++I E ++ K
Sbjct: 465 DRTGIKSLKVGYNKIFGYYIEITKSNLHLAPENYIRKQTLANCERYITPELKELEDKILG 524
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+ K + +Y++ +E +N + R+ +TA ++ELDVL SFA+ AS
Sbjct: 525 AEEKSIAIEYEQFIE-IRNMLLHEIERIQRTA-----------RAVAELDVLYSFAEAAS 572
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNM 666
Y +P +N + DI + RHP VE N FI ND + +ITGPNM
Sbjct: 573 E--NNYVKPTVNSSETIDI--KEGRHPVVEKVLENNMFISNDTYINTEDEQLLMITGPNM 628
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST++RQV + ILMAQ+GSFVP A+I + D IF RVGA D +G STFM EM E
Sbjct: 629 AGKSTYMRQVALIILMAQIGSFVPATSATIGITDRIFTRVGANDDLSQGQSTFMVEMSEM 688
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
A+I+ AT +SL+I+DE+GRGTST+DG +AW+ E++ + + + TLF+TH+HELT L+
Sbjct: 689 ATIVNLATKKSLLIVDEIGRGTSTFDGLSIAWSTAEYICQSLGSRTLFSTHYHELTKLS- 747
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
+ G+ NY V D + L+KV G D+S+GI VA+ A P +++
Sbjct: 748 --------ETYRGIKNYKVLVKED--KEDVIFLHKVVKGNADRSYGIQVAKLAGLPAAII 797
Query: 847 TLAREKAAELE 857
T A ++LE
Sbjct: 798 TRASHILSDLE 808
>gi|415886657|ref|ZP_11548437.1| DNA mismatch repair protein MutS [Bacillus methanolicus MGA3]
gi|387587344|gb|EIJ79667.1| DNA mismatch repair protein MutS [Bacillus methanolicus MGA3]
Length = 870
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 205/617 (33%), Positives = 327/617 (52%), Gaps = 60/617 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I Y + YM++D + R L + E+ K SL L++ T TA MG RLL W+ +PL
Sbjct: 245 ISTYQVHQYMKIDYYSKRNLELTETIRSKGKKGSLLWLLDETKTA-MGGRLLKQWIDRPL 303
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ + I RL V+ ++ RQDLR+ LK + D+ERL + + +++L +S
Sbjct: 304 INRDSIEKRLSFVETLMNHYFERQDLREKLKEVYDLERLAGRVAFGNVNARDLIQLKRSL 363
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
+++P+++ + + + +R LDP E +TD L + ALVE ++ G +
Sbjct: 364 LQVPHLKEIVAGLPNEDARHFADR-LDPCEEVTD--LLER--ALVENPPV--SIKEGN-I 415
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK- 520
I Y+ L ++ ++ + I L ++ + K+LK+ FG+ +TK
Sbjct: 416 IQDGYNEELDKYRDAMKNGKTWIAMLERKEREKTGI---KSLKVGYNRVFGYYIEVTKAN 472
Query: 521 ----EEPKIRKKLT----TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV 572
++ + +K T +FI E ++ + K + +YQ + E ++ KE +
Sbjct: 473 LHLLKDGQYERKQTLANAERFITPELKEKEALILEAEEKSVELEYQ-LFVELRDYVKEFI 531
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
R+ ++LA +SELDVL FA ++ +TRP + D I+++ R
Sbjct: 532 PRL-----------QALARTVSELDVLQCFATVSEE--RHFTRPAFS--DDRRIVIKDGR 576
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE + ++PNDC + + +ITGPNM GKST++RQ+ + ++AQ+G FVP
Sbjct: 577 HPVVEKVMNAQEYVPNDCYMDADREIL-LITGPNMSGKSTYMRQIALTAILAQIGCFVPA 635
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
A + + D +F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTSTY
Sbjct: 636 SEAVLPIFDQVFTRIGAADDLISGQSTFMVEMLEAKNAITNATKDSLILFDEIGRGTSTY 695
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG LA AI E++ I A TLF+TH+HELT L E + V N HVSA I+
Sbjct: 696 DGMALAQAIIEYIHNRIGAKTLFSTHYHELTVLEEE---------LPKVKNVHVSA-IEQ 745
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED--FTPSAVISDDA 869
K+ L+K++ GA D+S+GIHVA+ A PE ++ A E ELE + +A+ +DD
Sbjct: 746 NG-KVVFLHKIKEGAADKSYGIHVAQLAELPEDLINRANEILQELEQKAVSETAMNNDDR 804
Query: 870 KIEVGSKRKRISDPNDM 886
+ E +DP+DM
Sbjct: 805 QFE--------NDPSDM 813
>gi|363897251|ref|ZP_09323790.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB7]
gi|361958748|gb|EHL12045.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB7]
Length = 902
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 209/603 (34%), Positives = 317/603 (52%), Gaps = 39/603 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
ALG LSY L D +IRK + YM +DS + R L + E+ + K +L
Sbjct: 237 ALGGCLSY---LYDTQKNLLSHIRKIDFFQNKDYMIVDSYSQRNLELWETLREKKKRGTL 293
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
+++ T TA MG R+L +L++PL D +I ARLD V+ F ++LR++L I D
Sbjct: 294 LWVLDYTKTA-MGSRMLRHFLERPLRDKKKIEARLDAVEEFTGHYIDMEELREYLDSIYD 352
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
IERL+ + A + ++ L S LP I+ AL ++ S + E +D LE
Sbjct: 353 IERLLARISLSTANARDLLALKLSLQYLPDIKKALSPFQSSLLSKMGEE-MDSLE----- 406
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
D K + L E G +I +S+ + +N + + + L A + D
Sbjct: 407 DIYRKIEEEIVEEPPLSVKEGG--LIKASFSKDVEDYRNAGVNGKEWLQELE---ARERD 461
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
K LK+ FG+ F ++K + +I FI +T G ++ T+L++L ++
Sbjct: 462 KTGIKNLKIKYNRIFGYCFEVSKAYQGEI----PDYFIRRQTLAQGERYITTELEELQNR 517
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
E+ K+ + L + + + A L+ LD LS A LA Y RP
Sbjct: 518 ILGAEEKLKDLEYALFCTLREEIAEELPRIQKTARELAHLDAYLSLAKLA--IKENYVRP 575
Query: 617 DINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
++ + G + ++ RHP VE + +FIPND L + IITGPNM GKST++RQ
Sbjct: 576 RLS--EGGSLFIKEGRHPVVEKLLEEEHFIPNDTSLEENQE-IAIITGPNMAGKSTYMRQ 632
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +L++ +GSFVP A + + D IF RVGA D +G STFM EM E A+IL+ AT
Sbjct: 633 VALIVLLSAIGSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFMVEMSEVANILRNATK 692
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SL+I+DE+GRGTST+DG +AWA+ E++ I+A TLFATH+HELT L + N
Sbjct: 693 QSLLILDEIGRGTSTFDGLSIAWAVVEYIARHIQAKTLFATHYHELTELEGKLNN----- 747
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
V NY ++ + +++ L K+ PG D+S+GI VA+ A PE V++ ARE +A
Sbjct: 748 ----VKNYCIA--VSKKDGEISFLRKIIPGGADESYGIDVAKLAGVPEGVLSRAREISAF 801
Query: 856 LED 858
L D
Sbjct: 802 LSD 804
>gi|296188728|ref|ZP_06857115.1| DNA mismatch repair protein MutS [Clostridium carboxidivorans P7]
gi|296046655|gb|EFG86102.1| DNA mismatch repair protein MutS [Clostridium carboxidivorans P7]
Length = 903
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 212/637 (33%), Positives = 343/637 (53%), Gaps = 47/637 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y++ YM +D + R L + E+ D +K SL +M+RT TA MG R L W++QPL++
Sbjct: 256 YNVVDYMAIDINSRRNLELTETLRDKSKKGSLLWVMDRTNTA-MGGRQLRKWIEQPLINS 314
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+ I RLD V+ +++ ++ +DL++ LK I DIERL+ + + ++++ L S ++
Sbjct: 315 SSIKLRLDSVEELLNNLSVHEDLKEALKEIYDIERLVGKISSKNVNAKELISLKGSIKKI 374
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET-SVDLDQLENGEYMIS 463
P I+ L +E + + LD L+ + + L+K A+++T S+ L + +I
Sbjct: 375 PIIKKMLSNFETTLLHNMGVK-LDELQDIYE--ILDK--AIIDTPSISLKEGN----LIK 425
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
Y+ + LK + + I SL S+ ++ K+LK+ FG+ +TK
Sbjct: 426 EGYNGEVDELKLAKAHGKDWIASLEN---SEREITGIKSLKVGYNKVFGYYIEVTKSNLS 482
Query: 524 KIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFS 583
I + ++I +T + ++ LK++ D+ E+ N + ++ V
Sbjct: 483 SIPE---GRYIRKQTLANAERYITPSLKEMEDKILGAEEKLINLEYDIFIDVRDKIEKQV 539
Query: 584 EIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWV 642
+ + A ++SE+D L S A +A Y +P+I+ + DI +E RHP VE
Sbjct: 540 DRMQETAKIISEIDCLSSLATIA--LENNYCKPEISSKE--DICIEEGRHPVVEKMISSG 595
Query: 643 NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCI 702
+FI ND + IITGPNM GKST++RQV + +LMAQ+GSFVP +A ISV D I
Sbjct: 596 SFISNDTVINTSDEQLLIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKKAVISVCDKI 655
Query: 703 FARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICE 762
F R+GA D G STFM EM E ++ILK AT++SLI++DE+GRGTSTYDG +AW++ E
Sbjct: 656 FTRIGASDDLAAGKSTFMVEMWEVSNILKNATNKSLILLDEVGRGTSTYDGLSIAWSVIE 715
Query: 763 HLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
++ ++++ TLFATH+HELT L + GV NY VS + + L
Sbjct: 716 YICSSKKLKCKTLFATHYHELTKLES---------IIEGVKNYSVS--VKEIGSDIVFLR 764
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV----ISDDAKIEVG-- 874
K+ G DQS+GI VA+ A P+ V+ A+E +E S + IS++ I+V
Sbjct: 765 KIIRGGADQSYGIEVAKLAGLPDKVIERAKEILNSIETEKSSDIDVNEISNN-NIQVNKE 823
Query: 875 ----SKRKRISDPNDMSRGAARAHQF-LKEFSDMPLE 906
S+++ IS D+ + + LKE ++PL+
Sbjct: 824 HIAHSQKEYISVDEDIPSKKLKGNNLILKENKNVPLQ 860
>gi|170758982|ref|YP_001787121.1| DNA mismatch repair protein MutS [Clostridium botulinum A3 str.
Loch Maree]
gi|189030710|sp|B1KSA3.1|MUTS_CLOBM RecName: Full=DNA mismatch repair protein MutS
gi|169405971|gb|ACA54382.1| DNA mismatch repair protein MutS [Clostridium botulinum A3 str.
Loch Maree]
Length = 932
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 206/617 (33%), Positives = 330/617 (53%), Gaps = 67/617 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKIKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ I RL+ V+ +++ +L++DL++ LK I DIER++ + + ++++ L S
Sbjct: 311 INKTPIENRLNAVEELLNNISLQEDLKEDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKKYLSSFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKK------EEPKIRKKLTT---QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
TK E IRK+ + ++I E ++ K + +KL D K+ E ++
Sbjct: 476 TKANLNLVPEGRYIRKQTLSNAERYITPELKEMEEKILGAE-EKLIDIEYKLFTEIRDFI 534
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+E ++R+ +TA ++S++D L S A +A Y +P+IN D +I++
Sbjct: 535 EENIDRMQKTA-----------RIISDIDCLCSLATVA--LENNYIKPNINAKD--EILI 579
Query: 629 EGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
E RHP VE FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GS
Sbjct: 580 EEGRHPVVEKVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGS 639
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP A+IS+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRG
Sbjct: 640 FVPAKEANISICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRG 699
Query: 748 TSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TSTYDG +AW++ E++ + +R TLFATH+HELT L E N K GV NY V
Sbjct: 700 TSTYDGLSIAWSVIEYICNNKNLRCKTLFATHYHELTKL------EDNIK---GVKNYSV 750
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE-------- 857
S + ++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 751 S--VSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIEGDKEENSL 808
Query: 858 DFTPSAVISDDAKIEVG 874
+ TPS IEV
Sbjct: 809 NITPSKEYKSKDYIEVS 825
>gi|448620281|ref|ZP_21667629.1| DNA mismatch repair protein MutS [Haloferax denitrificans ATCC
35960]
gi|445757069|gb|EMA08425.1| DNA mismatch repair protein MutS [Haloferax denitrificans ATCC
35960]
Length = 942
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 234/728 (32%), Positives = 357/728 (49%), Gaps = 89/728 (12%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
T GL VD++ E L T + AL AL E L P E V +C L D
Sbjct: 168 TYGLAVVDVST-----GECL----VTGADRAL-ALEELERLAPAELVVGPDCD-LPD--- 213
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
+ + +T F+ D R + P D V + A+GA L+YAE
Sbjct: 214 ----LSFDPMETPFEPGAFDADAARETLSAYAPRPDAVVESDAELRAVGAALAYAEYAQG 269
Query: 274 ESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKR 331
+S Y R D +++LD+ A+R+L + ES++ A +LF +++ T A +G+R
Sbjct: 270 DSKLA-YVTRVTRFDPREFLQLDATAIRSLELFESRS-ARAGSTLFSVLDETACA-LGRR 326
Query: 332 LLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGL 391
L WL++PL+D + I ARLD V+A DD R DLR+HL + D+ERL+ + + RA
Sbjct: 327 RLEAWLRRPLVDRDRIEARLDAVEALCDDALARADLREHLSSVYDLERLVARVSRERADA 386
Query: 392 QQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD 451
+ + L + R+P +R AL + S +++ LD LE + D LV +V
Sbjct: 387 RDLRSLKTTLDRVPKVREALAGTDSDLLSDLRDS-LDELEDVRD---------LVGDAVV 436
Query: 452 LDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKALKL 505
D E G +I+ +D L ++ E+ + +L +Q + +D +L++
Sbjct: 437 SDPPQEITEGG--VIADGFDAELDEVRGTAEAGREWVSNLEAREQERTGID-----SLEV 489
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
G+ +T P + ++ + +T K+ +F +LK+ D+ + +
Sbjct: 490 GYNQVHGYYIEVTN---PNL-DRVPDDYQRRQTLKNSERFYTPELKEREDEILRASDRAD 545
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP----- 620
+ +L V T S +++A L++LDVL + AD+A + Y RP+ +
Sbjct: 546 ALEYDLFCEVRAEVATESARIQAVADALADLDVLRTLADVAVA--NDYARPEFHAGGERA 603
Query: 621 ----------------PDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITG 663
+ G I ++ RHP VE AQD F+PN L RG ++TG
Sbjct: 604 GDGAADDAPDDPNDGTAETGGIRIDAGRHPVVERAQD--EFVPNPADLPRGS--VALVTG 659
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST++RQV + ++AQVGSFVP A + V D +F R+GA D G STFM+EM
Sbjct: 660 PNMSGKSTYMRQVALVCVLAQVGSFVPAKSARLPVLDRVFTRIGASDDIAGGQSTFMREM 719
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
E IL AT SL+++DE+GRGTST DG +A A E L +E+ A TLFATH+H+LT
Sbjct: 720 SELTEILHNATGDSLVLLDEVGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTD 779
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
A + GV N H +A ++T L+ V G S+G+ VA+ A P
Sbjct: 780 AADDRE---------GVFNLHFTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPA 828
Query: 844 SVVTLARE 851
SVV AR+
Sbjct: 829 SVVGRARD 836
>gi|410657244|ref|YP_006909615.1| DNA mismatch repair protein MutS [Dehalobacter sp. DCA]
gi|410660280|ref|YP_006912651.1| DNA mismatch repair protein MutS [Dehalobacter sp. CF]
gi|409019599|gb|AFV01630.1| DNA mismatch repair protein MutS [Dehalobacter sp. DCA]
gi|409022636|gb|AFV04666.1| DNA mismatch repair protein MutS [Dehalobacter sp. CF]
Length = 850
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 207/615 (33%), Positives = 314/615 (51%), Gaps = 40/615 (6%)
Query: 249 DLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLD---SYMRLDSAAMRALNVLE 305
+L+ +A A L Y + + N G +I + S+ + M LD R L ++E
Sbjct: 208 ELLQQMPVACKAAAGLWQY--ISQNIPNSGQEHILRISVSQSSTAMVLDKWTRRNLELVE 265
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
S +++ +LF +N T TA G RLL W++QPL D IN RL V+ +T LRQ
Sbjct: 266 SLRTSDEKGTLFSTLNLTKTA-FGARLLRNWVQQPLRDPESINERLASVEELTRNTFLRQ 324
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
D+++ L + D+ERL+ L +A + ++ L + LP +R + + Q + +
Sbjct: 325 DIQKALTTVYDLERLLGKLSLGKASPRDLLALGSTLSCLPKVRDCITDNDSQKLA----K 380
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
YL L L DD + +A + + +I + Y + +L+ + I
Sbjct: 381 YLPSLAGL--DDLAQELLAAINPEAPYSPKDGN--IIQNGYSAEIDSLRAISSGGKEWIA 436
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
L Q + ++LK+ FG+ IT I + +T + +F
Sbjct: 437 RLENQERERTKI---RSLKIGFNKNFGYFIEITNANAHLIPDDYQRK----QTLVNAERF 489
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
+LK+ + ++ + + +L + + + S + + A L+E+DV +S A
Sbjct: 490 ITPELKEYEQRVLTAQDKLSDLEYQLFSVLRDKVLACSLLIINAAQSLAEIDVFVSLA-- 547
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPN 665
++ Y +P+I + I+ EG RHP VE + F+PND L R K +ITGPN
Sbjct: 548 GTAIQNNYVKPEIRSDGIIHIV-EG-RHPVVE-RICDTFVPNDTYLTRNKH-LALITGPN 603
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST++RQV + +LMAQ+GSFVP +A+IS+ DCIF RVGA D G STFM EM E
Sbjct: 604 MAGKSTYMRQVALIVLMAQIGSFVPAQKAAISIADCIFTRVGAADNLAAGQSTFMVEMNE 663
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTA 783
A ILK AT SLII+DE+GRGT+T+DG LAWAI E+LVE I+A TLFATH+HELT
Sbjct: 664 VAHILKNATADSLIILDEVGRGTATFDGLSLAWAIAEYLVENTNIKAKTLFATHYHELTE 723
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
L F N HV+ + + L+K+ PG D+S+G+HVA+ A P
Sbjct: 724 LEERYPEVF---------NLHVA--VREQGDDVVFLHKILPGKADRSYGLHVAKIAGLPP 772
Query: 844 SVVTLAREKAAELED 858
++ A ELE+
Sbjct: 773 HLLKRAAIILGELEN 787
>gi|158320586|ref|YP_001513093.1| DNA mismatch repair protein MutS [Alkaliphilus oremlandii OhILAs]
gi|158140785|gb|ABW19097.1| DNA mismatch repair protein MutS [Alkaliphilus oremlandii OhILAs]
Length = 874
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 212/611 (34%), Positives = 322/611 (52%), Gaps = 56/611 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GAL+ Y + + I Y+ M LD + R L + E+ NK SL +
Sbjct: 235 ATGALIHYLKSTQKRTLSHINKINIYTFTEKMVLDISTRRNLELTETIRGKNKKGSLLWI 294
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R++ W+++PLL++ IN RL+ V +D LR +L++ LK+I D+ER
Sbjct: 295 LDKTQTA-MGGRMIRKWIEEPLLNIQNINRRLEAVATLKNDILLRCELKESLKQIYDLER 353
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + A + +V L +S LP I+ + +E + S L+KE L + D L
Sbjct: 354 LSGKIAFGSATPRDLVALKKSVAFLPDIK---KLFENENSGLLKEL-------LNNIDTL 403
Query: 440 NKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
AL+E+S+ LD+ L++G +I Y+ L L + H + K ++
Sbjct: 404 EDIQALIESSI-LDEPSISLKDGG-IIKEGYNDELDEL---YVAAREGKHWIAKLEQAEK 458
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTT---QFIVLETRKDGVKFTN 547
D K+LK+ FG+ ITK E IRK+ ++I E ++ K
Sbjct: 459 DRTGIKSLKVGYNKIFGYYIEITKSNLHLAPENYIRKQTLANCERYITPELKELEDKILG 518
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+ K + +Y++ +E +N + R+ +TA ++ELDVL SFA+ AS
Sbjct: 519 AEEKSIAIEYEQFIE-IRNMLLHEIERIQRTA-----------RAVAELDVLYSFAEAAS 566
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNM 666
Y +P +N + DI + RHP VE N FI ND + +ITGPNM
Sbjct: 567 E--NNYVKPTVNSSETIDI--KEGRHPVVEKVLENNMFISNDTYINTEDEQLLMITGPNM 622
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST++RQV + ILMAQ+GSFVP A+I + D IF RVGA D +G STFM EM E
Sbjct: 623 AGKSTYMRQVALIILMAQIGSFVPATSATIGITDRIFTRVGANDDLSQGQSTFMVEMSEM 682
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAH 786
A+I+ AT +SL+I+DE+GRGTST+DG +AW+ E++ + + + TLF+TH+HELT L+
Sbjct: 683 ATIVNLATKKSLLIVDEIGRGTSTFDGLSIAWSTAEYICQSLGSRTLFSTHYHELTKLS- 741
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
+ G+ NY V D + L+KV G D+S+GI VA+ A P +++
Sbjct: 742 --------ETYRGIKNYKVLVKED--KEDVIFLHKVVKGNADRSYGIQVAKLAGLPAAII 791
Query: 847 TLAREKAAELE 857
T A ++LE
Sbjct: 792 TRASHILSDLE 802
>gi|449999923|ref|ZP_21824798.1| DNA mismatch repair protein MutS [Streptococcus mutans N29]
gi|449186343|gb|EMB88178.1| DNA mismatch repair protein MutS [Streptococcus mutans N29]
Length = 849
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPTVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTRL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|386814179|ref|ZP_10101403.1| DNA mismatch repair protein MutS [planctomycete KSU-1]
gi|386403676|dbj|GAB64284.1| DNA mismatch repair protein MutS [planctomycete KSU-1]
Length = 866
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 272/919 (29%), Positives = 428/919 (46%), Gaps = 91/919 (9%)
Query: 34 AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLL 93
A+ FF D+Y E+A +K T T+ + G +++ V + E+ R L+
Sbjct: 15 ALLFFRMGDFYELFFEDAKLASKVLGITLTSRSK---GENSIPMAGVPHHSAESYIRKLI 71
Query: 94 LERTDHTLEL-------YEGSGSNWR-LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALF 145
+ H + + E G R + + TPG + ED L E + ++AL
Sbjct: 72 --KAGHKVAICDQLQNPEEAKGIVDRGVTRIITPGTVT--EDSLL---EDKSNNYLMALL 124
Query: 146 PNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSEC 205
E GL ++DL+ + + D F L E L+P E +
Sbjct: 125 ----ETNTLFGLSWIDLSTGRFEVEDIQKDRLF----DEFARLNPSELLMPEETFHN-HT 175
Query: 206 KTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFE---IAP--GA 260
+ +M+T R EF ++D + G+ + GF+ + P GA
Sbjct: 176 AFVEKIRAEYNIMITARPDWEF-SKDTAYHILTEHFGTTS-----LEGFDCEDVGPALGA 229
Query: 261 LGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLM 320
GA++ Y + S I++Y D+ + +D A ++L + ++ ++ SL ++
Sbjct: 230 AGAVIQYLKDTQKTSLRHIIKIQRYRADNRVLIDKATQQSLELTQTMRTHDREGSLLAII 289
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERL 380
++T T MG RLL W+ PL EI R V + LR++LR L I DIER+
Sbjct: 290 DQTKTP-MGARLLREWVISPLRISAEIKYRQVGVYELFEKPELRRELRNILSNIYDIERI 348
Query: 381 MHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI---KERYLDPLESLTDDD 437
+ RA + ++ L QS +LP AL+ G S I E+ LD LE
Sbjct: 349 STKISCGRANARDLIALKQSLSKLP----ALKDQIGFCISDILVTTEQQLDTLE------ 398
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
+ I S +++G +I YD L LK ++ + I + + + +
Sbjct: 399 EVQTLIGAALVSDPPPTIKDGG-LIREGYDPALDELKYISKNGKSWIANFQAEEIARTGI 457
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
+LK+ FG+ +T I K +I +T K+ +F +LK D
Sbjct: 458 ---NSLKVGYNKVFGYYIEVTNIHMDNIPK----TYIRKQTLKNAERFITPELK---DYE 507
Query: 558 QKVL---EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYT 614
KVL E K+ + +L R+ + F+ + ++ ++ +DVL + A+LAS Y
Sbjct: 508 TKVLTADERAKDLEYDLFIRIREKVSAFTPQIQKISETIALIDVLSTLANLASE--NRYI 565
Query: 615 RPDINPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
P+I D ++ + RHP + + +N F+PND L + IITGPNM GKST+
Sbjct: 566 MPEIT--DSLELNIIDGRHPVL-TRKLINESFVPNDINLDGVNNKIMIITGPNMAGKSTY 622
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
IRQV + +LMAQ+GSF+P A I D IF RVGA D RG STFM EM ETA+IL
Sbjct: 623 IRQVALLVLMAQIGSFIPAKEAVIGTVDRIFTRVGASDELSRGQSTFMVEMNETANILNN 682
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT RSLII+DE+GRGTST+DG +AWAI E++ + I A TLFATH+HELT LA
Sbjct: 683 ATARSLIILDEVGRGTSTFDGISIAWAITEYIYQHIHARTLFATHYHELTELA------- 735
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
GV N+++ + ++ L K+ G D+S+GIHVA A P+ V+ AR
Sbjct: 736 --LLFPGVINFNIL--VKEWGDEIIFLRKIVEGGTDKSYGIHVARLAGIPKEVIQRARII 791
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRKRISD--PNDMSRGAARAHQFLKEFSDMPLETMDL 910
LE +A + + K + + K + D P + ++ ++E + + +
Sbjct: 792 LNNLE----AATLDINGKPKF-APLKTVQDKRPTQLKLFVSKQDMVIEEIKKLDISKISP 846
Query: 911 KEALERVKRMKDDLEKDAG 929
EAL ++ +K LE + G
Sbjct: 847 LEALNKLNELKRRLEDNNG 865
>gi|322371551|ref|ZP_08046097.1| DNA mismatch repair protein MutS [Haladaptatus paucihalophilus
DX253]
gi|320548842|gb|EFW90510.1| DNA mismatch repair protein MutS [Haladaptatus paucihalophilus
DX253]
Length = 888
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 212/629 (33%), Positives = 325/629 (51%), Gaps = 57/629 (9%)
Query: 246 PVRDLVSGFEIAPGALGALLSYAELLSDES--------------NYGNYYIRKYSLDSYM 291
P R L + EI A GALLSYAE + +Y N+ R Y SYM
Sbjct: 239 PDRLLATDAEIR--ACGALLSYAEYVRGGEGVTEDDTDDTDTRLDYLNHLTR-YDPRSYM 295
Query: 292 RLDSAAMRALNVLESK-TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
LD+ A+ +L + S+ + +L G+++ T A +G R L WL++PLL+ + I AR
Sbjct: 296 LLDAVALTSLELFSSRAVHGQDDATLVGVLDETACA-LGSRKLTDWLRRPLLERDRIEAR 354
Query: 351 LDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
LD V+ + R+++ + L+ + DIERL+ + + RA + + L + +P I A
Sbjct: 355 LDAVEEWTTTVQAREEVHELLRNVYDIERLISRVSRGRANARDLRSLKATLDVVPDIAEA 414
Query: 411 LQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
++ E + E LD + + D + + ++ E G +I S YD L
Sbjct: 415 MEGVESPKLRRLHEN-LDEMADVRD-----RIGRAIPEEPPIEITEGG--VIKSGYDDEL 466
Query: 471 SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLT 530
L+ + S + I L AS+ + +LK+ G+ +T K+ + T
Sbjct: 467 DDLRETERSGKAWIDDLE---ASERERTGIGSLKVGYNQVHGYYIEVTDPNLDKVPEDYT 523
Query: 531 TQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLA 590
+ +T K+ +F +LK+ D+ + + + +L V + SE +SLA
Sbjct: 524 RR----QTLKNSERFYTPELKEREDEIVRAEQRADELEYDLFCEVREAVAEESERVQSLA 579
Query: 591 TMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCK 650
L+ELD L++ A++A+ Y+RP+I P I + RHP VE + +F+PND +
Sbjct: 580 ETLAELDTLVALAEVAAK--HGYSRPEIVPEG---IEIRNGRHPVVE-RTQSSFVPNDTR 633
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L +ITGPNM GKST++RQV + ++AQVGSFVP D A + + D +F RVGA D
Sbjct: 634 L--DHDTLAVITGPNMAGKSTYMRQVALITILAQVGSFVPADEARLELVDRVFTRVGASD 691
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
G STFM EM E A IL ATDRSLI++DE+GRGTST DGF +A ++ EH+ +EI A
Sbjct: 692 DIAGGRSTFMVEMTELADILGNATDRSLILLDEVGRGTSTTDGFAIARSVTEHVHDEIGA 751
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR--KLTMLYKVEPGACD 828
TLFATH H+LTA+A + N N H +T R ++ + + GA
Sbjct: 752 KTLFATHHHDLTAVADDLPNAINL-------------HFGATERDGEVVFDHHISEGATM 798
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAELE 857
S+G+ VA+ A PESV+ +++ AE E
Sbjct: 799 ASYGVEVAQLAGVPESVIRRSKDLLAEDE 827
>gi|282889672|ref|ZP_06298211.1| hypothetical protein pah_c004o009 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500246|gb|EFB42526.1| hypothetical protein pah_c004o009 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 849
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 212/636 (33%), Positives = 324/636 (50%), Gaps = 41/636 (6%)
Query: 256 IAPG--ALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDAN 311
+ PG A GALL Y L S+ S + I+ Y+ Y+ LD +R L +++ +
Sbjct: 238 MVPGVHAAGALLQY--LQSELSLPIEHITDIQPYTTSQYLSLDRMTLRHLELIDPLNHGS 295
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
+ +L G+++ + T MG RLL W+KQPLL + EI+ R + VQAF D +L Q + L
Sbjct: 296 RKNTLLGVLDHSHTP-MGARLLRQWIKQPLLSIPEIHQRQEAVQAFYDTPSLMQRIGAVL 354
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE-RYLDPL 430
+++ D+ERLM + A + +V L S LP I++ L Q + L E + +D L
Sbjct: 355 EQVRDLERLMMRISSGYATPRDLVALRFSMEPLPEIKTLLLTLASQSALLATEAQRIDFL 414
Query: 431 ESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
+T + IA ++ G+ + Y L L+ + I Q
Sbjct: 415 PEMT------RLIANALVDDPPVKITEGK-IFRDGYHPELDELREISRDSKSWIARYQTQ 467
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+ L K+LK+ FG+ ++K + +K+ F +T + +F +L
Sbjct: 468 IRDETGL---KSLKVGFNRMFGYYIEVSKGQA----EKMPDSFQRRQTLVNAERFITPEL 520
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
K + E + EL + Q FS+ + A L+ +D L S + A +
Sbjct: 521 KNYEAKVLNAEERISAIENELFQTLRQQIGQFSKQVLTTAQALARIDCLRSLGEAART-- 578
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
Y RP ++ D + + RHP +EA FIPND L + +ITGPNM GK
Sbjct: 579 NQYIRPLVD--DSAHLKIVDGRHPVIEAAHAGEKFIPNDTLLDGSDNRLLLITGPNMAGK 636
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST+IRQV + +MAQ+GSF+P A + + D +F R+GA D RG STFM EM+ETA+I
Sbjct: 637 STYIRQVALITIMAQMGSFIPAKEAHVGLIDKVFTRIGASDDLSRGQSTFMVEMVETANI 696
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHE 787
L AT RSL+I+DE+GRGTSTYDG +AW++ EHL+ E A TLFATH+ ELT L
Sbjct: 697 LHNATSRSLVILDEIGRGTSTYDGISIAWSVAEHLLITEGKMAKTLFATHYWELTKLE-- 754
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
+++ G NY+V+ + + + L K+ G D+S+GIHV A P SV+T
Sbjct: 755 -------EKIPGAVNYNVA--VQENADNIIFLRKIIKGGTDKSYGIHVGRLAGLPPSVIT 805
Query: 848 LAREKAAELEDFTPSAVISDDAKIE-VGSKRKRISD 882
A+E LE+ + + +K + +K+K IS+
Sbjct: 806 RAKEILVHLEENANQKSVFEPSKPKRQPAKKKPISN 841
>gi|338176045|ref|YP_004652855.1| DNA mismatch repair protein MutS [Parachlamydia acanthamoebae UV-7]
gi|336480403|emb|CCB87001.1| DNA mismatch repair protein mutS [Parachlamydia acanthamoebae UV-7]
Length = 849
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 212/636 (33%), Positives = 324/636 (50%), Gaps = 41/636 (6%)
Query: 256 IAPG--ALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDAN 311
+ PG A GALL Y L S+ S + I+ Y+ Y+ LD +R L +++ +
Sbjct: 238 MVPGVHAAGALLQY--LQSELSLPIEHITDIQPYTTSQYLSLDRMTLRHLELIDPLNHGS 295
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
+ +L G+++ + T MG RLL W+KQPLL + EI+ R + VQAF D +L Q + L
Sbjct: 296 RKNTLLGVLDHSNTP-MGARLLRQWIKQPLLSIPEIHQRQEAVQAFYDTPSLMQRIGAVL 354
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKE-RYLDPL 430
+++ D+ERLM + A + +V L S LP I++ L Q + L E + +D L
Sbjct: 355 EQVRDLERLMMRISSGYATPRDLVALRFSMEPLPEIKTLLLTLASQSALLATEAQRIDFL 414
Query: 431 ESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
+T + IA ++ G+ + Y L L+ + I Q
Sbjct: 415 PEMT------RLIANALVDDPPVKITEGK-IFRDGYHPELDELREISRDSKSWIARYQTQ 467
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+ L K+LK+ FG+ ++K + +K+ F +T + +F +L
Sbjct: 468 IRDETGL---KSLKVGFNRMFGYYIEVSKGQA----EKMPDSFQRRQTLVNAERFITPEL 520
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
K + E + EL + Q FS+ + A L+ +D L S + A +
Sbjct: 521 KNYEAKVLNAEERISAIENELFQTLRQQIGQFSKQVLTTAQALARIDCLRSLGEAART-- 578
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
Y RP ++ D + + RHP +EA FIPND L + +ITGPNM GK
Sbjct: 579 NQYIRPLVD--DSAHLKIVDGRHPVIEAAHAGEKFIPNDTLLDGSDNRLLLITGPNMAGK 636
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST+IRQV + +MAQ+GSF+P A + + D +F R+GA D RG STFM EM+ETA+I
Sbjct: 637 STYIRQVALITIMAQMGSFIPAKEAHVGLIDKVFTRIGASDDLSRGQSTFMVEMVETANI 696
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELTALAHE 787
L AT RSL+I+DE+GRGTSTYDG +AW++ EHL+ E A TLFATH+ ELT L
Sbjct: 697 LHNATSRSLVILDEIGRGTSTYDGISIAWSVAEHLLITEGKMAKTLFATHYWELTKLE-- 754
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
+++ G NY+V+ + + + L K+ G D+S+GIHV A P SV+T
Sbjct: 755 -------EKIPGAVNYNVA--VQENADNIIFLRKIIKGGTDKSYGIHVGRLAGLPPSVIT 805
Query: 848 LAREKAAELEDFTPSAVISDDAKIE-VGSKRKRISD 882
A+E LE+ + + +K + +K+K IS+
Sbjct: 806 RAKEILVHLEENANQKSVFEPSKPKRQPAKKKPISN 841
>gi|424909279|ref|ZP_18332656.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845310|gb|EJA97832.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 904
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 222/662 (33%), Positives = 328/662 (49%), Gaps = 58/662 (8%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+ S S + +D A L ++++ + ++ SL +NRT T G G RLL L PL D
Sbjct: 281 RESAASTLFIDPATRANLELVKTLS-GERDGSLLHALNRTVTGG-GARLLAERLMSPLTD 338
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
INARLD V +DD +L LR LK+++D+ R + L R G + + + Q
Sbjct: 339 PERINARLDAVAYLIDDVSLCDGLRDALKQVADMPRALSRLALERGGPRDLGAIRQGLAS 398
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---DLDQLENGEY 460
I + L Q L+ E +L D L + + S+ DL L+
Sbjct: 399 AERIAAILDQ------GLLPEELAS---ALADLKALPSGLEAMLGSMLADDLPLLKRDGG 449
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+ + L ++ ++ R I L Q A + + K+LK+ G+ +T
Sbjct: 450 FLREGANPELDEVRALRDQSRRVIAGLQLQYAEETGI---KSLKIKHNNVLGYFIEVTAG 506
Query: 521 EEPKIRK--KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
+ + T+FI +T ++FT T+L L + E + E R+++
Sbjct: 507 NADVMTATDEAKTRFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEAFERMVKA 566
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
V ++ K+ A L+ +DV S A LA+ Y RP ++ I +G RHP VE
Sbjct: 567 VVQQADAIKAGALALAVIDVASSLAYLATE--QAYCRPIVDASMTFSI--KGGRHPVVEQ 622
Query: 639 ----QDWVNFIPNDCKLI------RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
Q FI N+C L G W ++TGPNMGGKSTF+RQ + ++AQ+GSF
Sbjct: 623 ALRRQSAGPFIANNCDLSAVNGGKNGAIW--LLTGPNMGGKSTFLRQNALIAILAQIGSF 680
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VP + A I V D +F+RVGA D RG STFM EM+ETA+IL ATDRSL+I+DE+GRGT
Sbjct: 681 VPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGT 740
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
+T+DG +AWA EHL E R LFATHFHELT L+ + N V HV
Sbjct: 741 ATFDGLSIAWASVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWEGHV--- 797
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---TPSAVI 865
L++V PGA D+S+GI VA A P SVV ARE +LED P++ +
Sbjct: 798 --------IFLHEVGPGAADRSYGIQVARLAGLPASVVDRAREVLTKLEDADRKNPASQL 849
Query: 866 SDDAKI-EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
DD + ++ +R+ G+++ + LK F+ + M +EAL+ + +K +L
Sbjct: 850 IDDLPLFQIAVRREETRKA-----GSSKVEEALKSFNP---DEMTPREALDALYALKKEL 901
Query: 925 EK 926
K
Sbjct: 902 GK 903
>gi|347753700|ref|YP_004861265.1| DNA mismatch repair protein MutS [Bacillus coagulans 36D1]
gi|347586218|gb|AEP02485.1| DNA mismatch repair protein MutS [Bacillus coagulans 36D1]
Length = 875
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 200/587 (34%), Positives = 310/587 (52%), Gaps = 50/587 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ Y + ++ +D + R L + E+ K SL L++ T TA MG RLL W+ +PL
Sbjct: 256 VEMYEVRRFLNIDYYSKRNLELTETIRGQGKKGSLLWLLDETMTA-MGGRLLKQWIGRPL 314
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
L +I ARL +V+ F++ R+D+R+ LK + D+ERL + + +++L S
Sbjct: 315 LKQEKIEARLQMVETFLNHYFEREDIRERLKEVYDLERLAGRVAFGNVNARDLIQLKCSL 374
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD----LDQLEN 457
++P IR+ ++ E S + LDP E LTD L+E +++ + E
Sbjct: 375 QQIPGIRAVMESLESPESKKLAA-LLDPCEELTD---------LLERAIEDNPPVSVKEG 424
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
G MI Y+ L ++ ++ ++ I SL + + K+LK+ FG+ +
Sbjct: 425 G--MIRDGYNEELDRYRDASKNGKQWIASLERDERERTGI---KSLKVGYNRVFGYYIEV 479
Query: 518 TKK-----EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV 572
TK EE + +K +T + +F +LK+ + E + + EL
Sbjct: 480 TKANLHLLEEGRYERK--------QTLANAERFITPELKEKEALILQAEERMIDLEYELF 531
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
+ F + LA +S +DVL SFA ++ YT+P V I EG R
Sbjct: 532 TEIRAHVKEFIPRLQRLAKAVSTIDVLQSFAVVSEK--RHYTKPVFREDGVLKIT-EG-R 587
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
HP VE D +++PNDC + + +ITGPNM GKST++RQ+ + +++AQ+G FVP
Sbjct: 588 HPVVEKVLDSQSYVPNDCLMDENREIL-LITGPNMSGKSTYMRQIALTVILAQIGCFVPA 646
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
A + V D IF R+GA D + G STFM EMLE + + AT+RSLI+ DE+GRGTSTY
Sbjct: 647 REAELPVFDRIFTRIGAADDLISGQSTFMVEMLEAKNAIANATERSLILFDEIGRGTSTY 706
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG LA A+ E++ +EI A TLF+TH+HELTAL+ E + + N HVSA
Sbjct: 707 DGMALAQAMIEYIHDEIGAKTLFSTHYHELTALSTE---------LGKLQNVHVSAM--E 755
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
+ K+ L+K++ G D+S+GIHVA+ A PE V+ A + LE+
Sbjct: 756 QNGKVVFLHKIKEGPADKSYGIHVAKLAGLPEQVICRAEKILHALEN 802
>gi|227872342|ref|ZP_03990695.1| DNA mismatch repair protein MutS [Oribacterium sinus F0268]
gi|227841806|gb|EEJ52083.1| DNA mismatch repair protein MutS [Oribacterium sinus F0268]
Length = 881
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 227/717 (31%), Positives = 359/717 (50%), Gaps = 58/717 (8%)
Query: 143 ALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKS 202
A++P IGL VD++ L D + + KE L P ++
Sbjct: 131 AIYPG----NSGIGLATVDISTGELYSLSVSDSKELLD---EISRFSPKEILCPIGFLED 183
Query: 203 SECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAP---G 259
E + D +R + +TE++K F + + L S+ + G E AP
Sbjct: 184 KELSSALD--SRFSLSITEKEKEYFGKEEADKILSSHFSSSIPGL-----GLEHAPLERR 236
Query: 260 ALGALLSYAELLSDESNYGNY--YIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
ALGA L Y L + N ++ +I ++ + YM LD + R L + E+ D K SL
Sbjct: 237 ALGACLRY--LYDTQKNILSHIRHIERFHREDYMLLDLSTQRNLELWETLRDKKKRGSLL 294
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
++++T TA MG R+L +L++PL + ++ RLD ++ ++LR++L I D+
Sbjct: 295 WVLDKTHTA-MGSRMLRHFLERPLRERKKMEERLDCIEELCQRYIDGEELREYLDSIYDM 353
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + A + ++ L S LP I+ L + G+ + ++ +D LE +
Sbjct: 354 ERLIGKISISSANARDMLALKSSLQFLPVIKRTLSSFSGKLLQDLGQK-MDALEEI---- 408
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
+ +E L E G +I SS+ + + E + ++ L +Q +
Sbjct: 409 -YTRIDECIEEDPPLSIKEGG--IIKSSFHEEVRLFREAGEHGKEWLNRLEEQEREKSGI 465
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
K LK+ FG+ F I+K + +I FI +T ++T +L+ L ++
Sbjct: 466 ---KNLKIKYNRIFGYCFEISKSYQGEI----PDYFIRRQTLAQAERYTTVELQDLQNKI 518
Query: 558 QKVLEEYKNCQKEL-VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
E + + L VN + + + K+ A ++ LD LS + +A Y RP
Sbjct: 519 LGAAENLQQLEYSLFVNLREELSRELGRMQKT-AKEIAFLDACLSLSKVAMQ--EQYVRP 575
Query: 617 DINPPDVGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
IN + G++ + RHP VE QD +F+PND L + + IITGPNM GKST++R
Sbjct: 576 KIN--EKGNLTIVDGRHPVVEKLLQDQ-SFVPNDASLGKEEK-IAIITGPNMAGKSTYMR 631
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
QV + +LMA +GSFVP +A I + D IF RVGA D G STFM EM E ++IL+ AT
Sbjct: 632 QVALIVLMASIGSFVPAKQADIPICDRIFTRVGASDDLASGQSTFMVEMSEVSNILRNAT 691
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNT 794
+ SL+I+DE+GRGTST+DG +AWA+ E+L EI+A TLFATH+HEL+ L + N
Sbjct: 692 ENSLLILDEIGRGTSTFDGLSIAWAVVEYLAREIKAKTLFATHYHELSVLEGKLEN---- 747
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
V NY ++ + ++ L K+ PG D+S+GI VA+ A P V+ ARE
Sbjct: 748 -----VKNYCIA--VSKEQGEIQFLRKIMPGGADESYGIDVAKLAGVPAPVLDRARE 797
>gi|24380425|ref|NP_722380.1| DNA mismatch repair protein MutS [Streptococcus mutans UA159]
gi|449983731|ref|ZP_21818602.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM2]
gi|450081136|ref|ZP_21851541.1| DNA mismatch repair protein MutS [Streptococcus mutans N66]
gi|450181402|ref|ZP_21887810.1| DNA mismatch repair protein MutS [Streptococcus mutans 24]
gi|44888210|sp|Q8DRW8.1|MUTS_STRMU RecName: Full=DNA mismatch repair protein MutS
gi|24378451|gb|AAN59686.1|AE015031_2 DNA mismatch repair protein [Streptococcus mutans UA159]
gi|449180987|gb|EMB83119.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM2]
gi|449215613|gb|EMC15795.1| DNA mismatch repair protein MutS [Streptococcus mutans N66]
gi|449246526|gb|EMC44828.1| DNA mismatch repair protein MutS [Streptococcus mutans 24]
Length = 849
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 217/680 (31%), Positives = 340/680 (50%), Gaps = 54/680 (7%)
Query: 203 SECKTLRDALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL 261
SE L+ G L+E + F K +L+ ++ V V + D + E+A A
Sbjct: 163 SEVLNLKTRELVIGFELSENEDQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AA 220
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMN 321
G LL Y + Y + Y+++ A +L++LE+ K+ SL+ L++
Sbjct: 221 GKLLQYVHNTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLD 280
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
T TA MG RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL
Sbjct: 281 ETKTA-MGTRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLA 339
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLN 440
+ +A + +++L Q+ ++P I++ L+ + LESL + D L
Sbjct: 340 SRVSFGKANPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLP 388
Query: 441 KFIALVETSVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTAS 493
+ AL+ +++D + E G MI +D L + E S I + +Q +
Sbjct: 389 ELEALIRSAIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSG 446
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
LK+D + G+ F +T + F T K+ +F +L K+
Sbjct: 447 I------STLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKI 496
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
+ + EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y
Sbjct: 497 EGEMLEAREESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHY 554
Query: 614 TRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
RP N +I +E RH VE +IPN + K+ Q+ITGPNM GKST+
Sbjct: 555 VRPSFNHQQ--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTY 611
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQ+ + ++MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K
Sbjct: 612 MRQLALTVIMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKA 671
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEF 792
AT SLI+ DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L
Sbjct: 672 ATPNSLILFDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL-------- 723
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
+ ++ + N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A
Sbjct: 724 -STRLTSLVNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHI 780
Query: 853 AAELEDFTPSAVISDDAKIE 872
+LE SA +S + K E
Sbjct: 781 LVDLEKM--SAAVSVNLKNE 798
>gi|450174687|ref|ZP_21884718.1| DNA mismatch repair protein MutS [Streptococcus mutans SM1]
gi|449248143|gb|EMC46404.1| DNA mismatch repair protein MutS [Streptococcus mutans SM1]
Length = 849
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 356/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLAIVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|401564533|ref|ZP_10805420.1| DNA mismatch repair protein MutS [Selenomonas sp. FOBRC6]
gi|400188743|gb|EJO22885.1| DNA mismatch repair protein MutS [Selenomonas sp. FOBRC6]
Length = 863
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 335/651 (51%), Gaps = 59/651 (9%)
Query: 291 MRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
M+LD+ +R L + S D K +LF +++ T T MG RLL WL+ PLL + I AR
Sbjct: 262 MQLDTYTLRNLEITRSLRDGGKKNTLFDVLDFTRTP-MGTRLLRAWLEHPLLTPHRIEAR 320
Query: 351 LDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
LD V V++ LR LR+ L+ + D ERL+ +E + A + +V L S LP +R+A
Sbjct: 321 LDAVAELVENAGLRGTLREQLRSVYDFERLLTRIETQTANARDLVALRVSLTALPAVRTA 380
Query: 411 LQQYEGQFSSLIKERYLDPLESLTD-DDHLNKFIALVETSVDLDQLENGEYMISSSYDTG 469
L G +S + R +++ D L + A+V+ L E G +I + YD
Sbjct: 381 L----GSTASRLLMRAASSIQTFDALRDSLER--AIVDEP-GLSVREGG--IIRAGYDAA 431
Query: 470 LSALK---NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
L L+ ++ +SL +++ ++T + + K LK+ FG+ + R
Sbjct: 432 LDELRAFSHDSKSLLQEMEE-RERTRTGI-----KTLKIGYNKVFGYYIEVRHSG----R 481
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
++ +I +T + +F +LK LG + + EY + L + V V
Sbjct: 482 DQVPDDYIRKQTLANTERFITEELKDFEAKILGAEEKITALEY-HIFTTLRDEVKAQLVP 540
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQD 640
+ +++A +DVL S A+ A+S Y RP + G I++ RHP VE +
Sbjct: 541 IQNVARAIA----RVDVLQSLAEAAASYR--YVRPKVTAN--GTILIRDGRHPLVERILE 592
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
F+PND +L G + +ITGPNM GKST++RQV + LMAQVGSFVP A I+ D
Sbjct: 593 REIFVPNDTELSHGGTETMLITGPNMAGKSTYMRQVALLTLMAQVGSFVPARTAEIAPVD 652
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
IF R+GA D + G STFM EM E A IL+ AT SL+I+DE+GRGTST+DG +A A+
Sbjct: 653 RIFTRIGASDDLVSGQSTFMVEMNEVAQILREATRDSLVILDEIGRGTSTFDGMSIARAV 712
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
EH+ I A TLFATH+HELT + +E+ + NY ++ + + + L
Sbjct: 713 VEHIDTRIHAKTLFATHYHELTEMENEH-----------IRNYCIA--VREKGKNVAFLR 759
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRI 880
++ GA D+S+GIHVA A P V A E LE S A+I S ++
Sbjct: 760 RIVAGAADKSYGIHVARLAGLPAKVTARAEEILHALEQ---KEAASTAAEIPAASTQE-- 814
Query: 881 SDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAGDC 931
+ P+ M+ + A L E + + TM EA+ + R+++ K+AG+
Sbjct: 815 TSPDAMA--SLFADGTLAELRTLDVMTMTPLEAMNTLYRLQEQARKEAGEA 863
>gi|302670850|ref|YP_003830810.1| DNA mismatch repair protein MutS [Butyrivibrio proteoclasticus
B316]
gi|302395323|gb|ADL34228.1| DNA mismatch repair protein MutS [Butyrivibrio proteoclasticus
B316]
Length = 880
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 212/619 (34%), Positives = 322/619 (52%), Gaps = 48/619 (7%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNY-YIRKYSLDSYMRLDSAAMRALNVLESKTD 309
V F A GALL Y + +S+ GN +I Y YM LDS+ R L ++E+ D
Sbjct: 221 VDDFPNGVVAAGALLQYL-IDMQKSDVGNITHIYPYLASKYMLLDSSTRRNLELVETMRD 279
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
K +L ++++T TA MG R L +++QPL+D NEI R V++ V + R+++R+
Sbjct: 280 KQKRGTLLWVLDKTKTA-MGARTLRSFIEQPLIDRNEILKRQSAVESLVKNVVSREEIRE 338
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL--QQYEGQFSSLIKERYL 427
+L I D+ERLM + + A + ++ S +P I++AL Q + + S+L
Sbjct: 339 YLGPIYDLERLMSKIIYKTANPRDLLAFRNSISMIPAIKTALLDVQSDAELSAL-----E 393
Query: 428 DPLESLTDDDHLNKFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
D L++L D + + I A+VE L E+G +I +D + + + + +
Sbjct: 394 DNLDALRD---IYELIDQAIVEEP-PLAIKESG--IIKEGFDADIDHFREAGTNGKTWLA 447
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
+ + + K L++ FG+ F +T + K+ FI +T + ++
Sbjct: 448 EMEESEKEKTGI---KNLRIKYSNVFGYSFEVTNS----FKDKVPEYFIRKQTLTNCERY 500
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
T +LK+L D ++ N + E+ ++ + + ++ A ++ LDV S A +
Sbjct: 501 TTPELKELEDTILNAQDKLNNLEYEMFCKIRDSIALEIDRIQTTAKAIALLDVYASLAYV 560
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVE----AQDWVNFIPNDCKLIRGKSWFQII 661
A Y +P IN + G I ++ RHP VE D FI ND L K II
Sbjct: 561 AEK--NHYVKPSIN--EKGIINIKEGRHPVVERMLDTSDM--FISNDTYLDNKKHCISII 614
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST++RQ + +LMAQ+GSFVP +A I V D IF RVGA D G STFM
Sbjct: 615 TGPNMAGKSTYMRQTALIVLMAQIGSFVPASKADICVVDRIFTRVGASDDLGSGQSTFMV 674
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFH 779
EM E A+IL+ AT SL+I+DE+GRGTSTYDG +AWA+ EH+ + A TLFATH+H
Sbjct: 675 EMNEVANILRNATPNSLLILDEIGRGTSTYDGLAIAWAVTEHISNRKILGAKTLFATHYH 734
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
ELT L +M V NY ++ + + L K+ G D+S+GI VA+ A
Sbjct: 735 ELTELE---------GKMDNVNNYCIA--VKENGDDIVFLRKIVKGGADKSYGIQVAKLA 783
Query: 840 NFPESVVTLAREKAAELED 858
P+ V+ A+E EL D
Sbjct: 784 GVPDMVIDRAKEIVTELTD 802
>gi|167745632|ref|ZP_02417759.1| hypothetical protein ANACAC_00324 [Anaerostipes caccae DSM 14662]
gi|167654944|gb|EDR99073.1| DNA mismatch repair protein MutS [Anaerostipes caccae DSM 14662]
Length = 872
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 222/675 (32%), Positives = 344/675 (50%), Gaps = 46/675 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
A GALL Y L + N N+ + Y YM +DS++ R L + E+ D K SL
Sbjct: 236 ATGALLLY--LHETQKNALNHLMSVSPYETSEYMIIDSSSRRNLELCETLRDKKKKGSLL 293
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
G++++T TA MG RLL ++QPL+D +I R D + + R+++R++L + D+
Sbjct: 294 GVLDKTKTA-MGARLLRSMIEQPLIDRVKIEERYDALTSLTKQAIAREEIREYLNPVYDL 352
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERLM + + + ++ L S LP I++ L++ S ++E L++L D
Sbjct: 353 ERLMTKVSYQTINPRDMIALKVSLQWLPPIKTILEECGDSLLSGLRE----DLDTLEDVA 408
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
L + L E + + E G +I + + LK + ++ + L ++ +
Sbjct: 409 GLLEDAILEEPPIAVK--EGG--IIKDGFSEQIDQLKRAKTDGKQWLMQLEERERRATGI 464
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
K LK+ FG+ +T + K+ +I +T + ++T +L KL D
Sbjct: 465 ---KTLKVKFNKVFGYYLDVTNS----YKDKVPEHYIRKQTLTNSERYTTEELNKLADTI 517
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ + E + +T E K A +++ LDVL S A +A Y RP
Sbjct: 518 LGAEDRLCALEYETFASIRETLAGEMERIKKTAGVIAYLDVLCSLACVAEQ--NGYVRPK 575
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
+N + DI + RHP VE Q N FI ND L + IITGPNM GKST++RQ
Sbjct: 576 LNTKGLIDI--KEGRHPVVE-QMMSNDMFISNDTYLDSKRHRVSIITGPNMAGKSTYMRQ 632
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
+ +LMAQ+GSFVP +A+I + D IF RVGA D G STFM EM E A+IL+ AT
Sbjct: 633 SALIVLMAQIGSFVPAQKANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNATK 692
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFN 793
SL+I+DE+GRGTSTYDG +AWA+ E++ + A TLFATH+HELT L
Sbjct: 693 DSLLILDEIGRGTSTYDGLSIAWAVVEYISNPKLLGAKTLFATHYHELTELEG------- 745
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
++ V NY ++ + + L K+ G D+S+GI VA+ A P+ V+ A+E
Sbjct: 746 --KIGSVNNYCIA--VKEQGDNIVFLRKIVKGGADKSYGIQVAKLAGVPDMVIQRAKEIV 801
Query: 854 AELEDFTPSAVISDDAKIEVGSKRKRIS-DPNDMSRGAARAHQFLKEFSDMPLETMDLKE 912
+EL D S ++S KI+V S+ +++S ND H F+ E L +M E
Sbjct: 802 SELSD---SDIVSQAQKIQVSSEPQQLSLFANDSE--PMMEHPFMAEIRKKDLSSMTPLE 856
Query: 913 ALERVKRMKDDLEKD 927
AL + +++ L ++
Sbjct: 857 ALNYLYILQNRLREE 871
>gi|404496284|ref|YP_006720390.1| DNA mismatch repair protein MutS [Geobacter metallireducens GS-15]
gi|418064991|ref|ZP_12702367.1| DNA mismatch repair protein MutS [Geobacter metallireducens RCH3]
gi|123572094|sp|Q39VR6.1|MUTS_GEOMG RecName: Full=DNA mismatch repair protein MutS
gi|78193891|gb|ABB31658.1| DNA mismatch repair ATPase MutS-1 [Geobacter metallireducens GS-15]
gi|373563264|gb|EHP89465.1| DNA mismatch repair protein MutS [Geobacter metallireducens RCH3]
Length = 872
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 245/771 (31%), Positives = 362/771 (46%), Gaps = 92/771 (11%)
Query: 112 RLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAE 171
++VK TPG + E + N L F N G+ Y+D++ E
Sbjct: 104 QVVKVVTPGLVVESESLSPKENNF--------LLSLFDGNNGRWGVAYLDIST-----GE 150
Query: 172 FLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRD 231
F T VE A G C P E + + + R+ + G +T D
Sbjct: 151 F----RLTEVEGHDAAWGEVACANPREILVPA---SFRENMRGEGRGDLAAGRTFTYVDD 203
Query: 232 LVQDLD---RLVRGSVEPVRDLVSGFEIA-PGALGALLSYAELLSDESNYGNYY------ 281
V D D RL++ F +A PGALG YAE L + +Y
Sbjct: 204 WVYDRDYTERLIKNH----------FGVASPGALGCD-GYAEGLQAAAAVLHYLQETQKG 252
Query: 282 -------IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
+R Y ++ LD A R L + + ++ + SL GL++RT TA MG R L
Sbjct: 253 RVDHIRELRAYRTQEFLVLDEATRRNLELTATLSEGKRRGSLLGLLDRTATA-MGGRKLR 311
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQI 394
W+ PL+ V +I R D V +D ALR +R+ L+ + D+ERL + +G + +
Sbjct: 312 QWINYPLVIVEKIKERQDAVGELANDPALRAGIREALEGVYDLERLNGRISLASSGAKDL 371
Query: 395 VKLYQSSIRLPYIRSALQQYEGQFSSLIKE--RYLDPLESLTDDDHLNKFIALVETSVDL 452
V L S R+P + S L E ++L+ E + +DP++ + + L+ +
Sbjct: 372 VALKASLQRIPPLLSLL---ESTGTALLGELCKGIDPMDEVAE---------LIGRGIVD 419
Query: 453 DQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
D L G +I+ Y L L+ + I L + + + +LK+
Sbjct: 420 DPPFVLREGG-IIADGYHAELDELRAISREGKGFIARLEAKEKARTGI---TSLKIRYNK 475
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
FG+ +TK I + +I +T + +F +LK+ ++ E +
Sbjct: 476 VFGYYIEVTKTNLGSIPE----DYIRRQTLANAERFITPELKEYEEKVLGAEERIVELEY 531
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
L ++ Q+ E A L+ LDVL S AD+A Y RP I+ D + +
Sbjct: 532 SLFQQIRQSVAAEGERLARTADRLATLDVLASLADVAHE--RNYCRPGIDDGDT--LSIS 587
Query: 630 GSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
RHP VEA + F+PND L G++ IITGPNM GKSTF+RQV + +LMAQ+GSF
Sbjct: 588 EGRHPVVEALNVSERFVPNDVLLDNGENQLVIITGPNMAGKSTFMRQVALIVLMAQLGSF 647
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VP A I V D IF RVGA D RG STFM EM+ETA+IL+ AT +SL+++DE+GRGT
Sbjct: 648 VPATEARIGVVDRIFTRVGASDNLARGQSTFMVEMMETAAILRNATPKSLVVLDEIGRGT 707
Query: 749 STYDGFGLAWAICEHLVEEIR--APTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
ST+DG +AWA+ E+L + R A TLFATH+HELT LA + N +V+
Sbjct: 708 STFDGVSIAWAVAEYLHDTARCAAKTLFATHYHELTELAVTRGK---------IKNCNVA 758
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ + ++ L K+ G S+GI VA A P V+ A+E LE
Sbjct: 759 --VKEWNDQVIFLRKIVEGGASHSYGIQVARLAGLPIEVIERAKEILHNLE 807
>gi|335045167|ref|ZP_08538190.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 108
str. F0425]
gi|333758953|gb|EGL36510.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 108
str. F0425]
Length = 907
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 208/603 (34%), Positives = 317/603 (52%), Gaps = 39/603 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
ALG LSY L D +IRK + YM +DS + R L + E+ + K +L
Sbjct: 237 ALGGCLSY---LYDTQKNLLTHIRKIEYFQNKDYMIVDSYSQRNLELWETLREKKKRGTL 293
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
+++ T TA MG R+L +L++PL D +I ARLD V+ F ++LR++L I D
Sbjct: 294 LWVLDYTKTA-MGSRMLRHFLERPLRDKKKIEARLDAVEEFNGHYIDMEELREYLDSIYD 352
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
IERL+ + A + ++ L S LP I+ AL ++ S ++E LD LE
Sbjct: 353 IERLLSRISLSTANARDLLALKLSLQYLPDIKKALLPFQSSLLSKMREE-LDCLE----- 406
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
D K + L E G +I +S+ + +N + + + L +
Sbjct: 407 DIYRKIEEEIVEEPPLSVKEGG--LIKASFSKDVEDYRNAGVNGKEWLQELEAREREKTG 464
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+ K LK+ FG+ F ++K + +I FI +T G ++ T+L++L ++
Sbjct: 465 I---KNLKIKYNRIFGYCFEVSKAYQGEI----PDYFIRRQTLAQGERYITTELEELQNR 517
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
E+ K+ + L + + + A L+ LD LS A LA Y RP
Sbjct: 518 ILGAEEKLKDLEYALFCTLREEIAAELPRIQKTARELAHLDAYLSLAKLA--IKENYVRP 575
Query: 617 DINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
++ + G + ++ RHP VE + +FIPND L + IITGPNM GKST++RQ
Sbjct: 576 RLS--EGGSLFIKEGRHPVVEKLLEEEHFIPNDTSLEENQE-IAIITGPNMAGKSTYMRQ 632
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +L++ +GSFVP A + + D IF RVGA D +G STFM EM E A+IL+ AT
Sbjct: 633 VALIVLLSAIGSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFMVEMSEVANILRNATK 692
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SL+I+DE+GRGTST+DG +AWA+ E++ I+A TLFATH+HELT L + N
Sbjct: 693 QSLLILDEIGRGTSTFDGLSIAWAVVEYIARHIQAKTLFATHYHELTELEGKLNN----- 747
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
V NY ++ + +++ L K+ PG D+S+GI VA+ A PE V++ ARE +A
Sbjct: 748 ----VKNYCIA--VSKKDGEISFLRKIIPGGADESYGIDVAKLAGVPEGVLSRAREISAF 801
Query: 856 LED 858
L D
Sbjct: 802 LSD 804
>gi|387817995|ref|YP_005678340.1| DNA mismatch repair protein MutS [Clostridium botulinum H04402 065]
gi|322806037|emb|CBZ03604.1| DNA mismatch repair protein MutS [Clostridium botulinum H04402 065]
Length = 932
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 318/583 (54%), Gaps = 41/583 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS+ Y+ +D + R L + E+ + K SL ++++T TA MG R L W++QPL
Sbjct: 252 IDYYSIVDYLTIDVNSRRNLEITENLREKTKKGSLLWVLDKTNTA-MGGRQLRRWIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ + I RL+ V+ +++ +L++DL+ LK I DIER++ + + ++++ L S
Sbjct: 311 INKSPIENRLNAVEELLNNISLQEDLKGDLKSIYDIERIVGKVASKSVNAKELISLKCSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLE---SLTDDDHL-NKFIALVETSVDLDQLEN 457
++PYI+ L ++ L E+ +D LE L D L N +++ E ++
Sbjct: 371 GKVPYIKKYLSNFKSDLF-LNMEQCIDTLEDIHKLLDKALLDNPSLSVKEGNI------- 422
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
I ++ + +L+ + + ++ I SL ++ + + K+LK+ FG+ I
Sbjct: 423 ----IKEGFNEEVDSLREAKSNGKKWIASLEQKEKEETGI---KSLKVSYNKVFGYFIEI 475
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ 577
TK + + ++I +T + ++ +LK++ ++ E+ + + +L ++
Sbjct: 476 TKANLNLVPE---GRYIRKQTLSNAERYITPELKEMEEKILGAEEKLIDIEYKLFTKIRD 532
Query: 578 TAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE 637
+ + A ++S++D L S A +A Y +P+IN D +I++E RHP VE
Sbjct: 533 FIEENIDRMQKTARIISDIDCLCSLATVA--LENNYIKPNINAKD--EILIEEGRHPVVE 588
Query: 638 -AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
FI ND + ++ +ITGPNM GKST++RQV + +MAQ+GSFVP +A+I
Sbjct: 589 KVIPKGEFISNDSLIDTKENQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKKANI 648
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
S+ D IF R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +
Sbjct: 649 SICDKIFTRIGASDDLAAGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSI 708
Query: 757 AWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
AW++ E++ + +R TLFATH+HELT L + GV NY VS +
Sbjct: 709 AWSVIEYICNNKNLRCKTLFATHYHELTKLED---------NIEGVKNYSVS--VSELEN 757
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ L K+ G DQS+GI VA+ A P V+ A+E +E
Sbjct: 758 EIVFLRKIIRGGADQSYGIEVAKLAGLPSPVINRAKEILQHIE 800
>gi|450064170|ref|ZP_21845291.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML5]
gi|449203955|gb|EMC04786.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML5]
Length = 849
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 355/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + + +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STILTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|449893954|ref|ZP_21789009.1| DNA mismatch repair protein MutS [Streptococcus mutans SF12]
gi|449255571|gb|EMC53419.1| DNA mismatch repair protein MutS [Streptococcus mutans SF12]
Length = 849
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 224/732 (30%), Positives = 357/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + + + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDNQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISERQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F ++L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTSELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|363899230|ref|ZP_09325740.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB1]
gi|395209621|ref|ZP_10398715.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB8]
gi|361959067|gb|EHL12363.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB1]
gi|394705252|gb|EJF12781.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB8]
Length = 902
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 206/603 (34%), Positives = 316/603 (52%), Gaps = 39/603 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
ALG LSY L D +IR+ + YM +DS + R L + E+ + K +L
Sbjct: 237 ALGGCLSY---LYDTQKNLLTHIRRIDFFQNKDYMVVDSYSQRNLELWETLREKKKRGTL 293
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
+++ T TA MG R+L +L++PL D +I ARLD V+ F ++LR++L I D
Sbjct: 294 LWVLDYTKTA-MGSRMLRHFLERPLRDKKKIEARLDAVEEFTGHYIDMEELREYLDSIYD 352
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
IERL+ + A + ++ L S LP I+ AL ++ S + E +D LE
Sbjct: 353 IERLLSRISLSTANARDLLALKLSLQYLPDIKKALSPFQSSLLSKMGEE-MDSLE----- 406
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
D K + L E G +I +S+ + +N + + + L +
Sbjct: 407 DIYRKIEEEIVEEPPLSVKEGG--LIKASFSKDVEDYRNAGVNGKEWLQELEAREREKTG 464
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+ K LK+ FG+ F ++K + +I FI +T G ++ T+L++L ++
Sbjct: 465 I---KNLKIKYNRIFGYCFEVSKAYQGEI----PDYFIRRQTLAQGERYITTELEELQNR 517
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
E+ K+ + L + + + A L+ LD LS A LA Y RP
Sbjct: 518 ILGAEEKLKDLEYALFCTLREEIAAELPRIQKTARELAHLDAYLSLAKLA--IKENYVRP 575
Query: 617 DINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
++ + G + ++ RHP VE + +FIPND L + IITGPNM GKST++RQ
Sbjct: 576 RLS--EGGSLFIKEGRHPVVEKLLEEEHFIPNDTSLEENQE-IAIITGPNMAGKSTYMRQ 632
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +L++ +GSFVP A + + D IF RVGA D +G STFM EM E A+IL+ AT
Sbjct: 633 VALIVLLSAIGSFVPAKEAELPICDRIFTRVGASDDLAQGQSTFMVEMSEVANILRNATK 692
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SL+I+DE+GRGTST+DG +AWA+ E++ I+A TLFATH+HELT L + N
Sbjct: 693 QSLLILDEIGRGTSTFDGLSIAWAVVEYIARHIQAKTLFATHYHELTELEGKLNN----- 747
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
V NY ++ + +++ L K+ PG D+S+GI VA+ A PE V++ ARE +A
Sbjct: 748 ----VKNYCIA--VSKKDGEISFLRKIIPGGADESYGIDVAKLAGVPEGVLSRAREISAF 801
Query: 856 LED 858
L D
Sbjct: 802 LSD 804
>gi|168207459|ref|ZP_02633464.1| DNA mismatch repair protein MutS [Clostridium perfringens E str.
JGS1987]
gi|170661161|gb|EDT13844.1| DNA mismatch repair protein MutS [Clostridium perfringens E str.
JGS1987]
Length = 909
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 316/582 (54%), Gaps = 39/582 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ + E SSL+K Y + D L L+E S+ D L++G
Sbjct: 371 GKIPNVKGII---ENCTSSLLKNYY-------NNLDDLRDIYELLEKSIKEDPSLTLKDG 420
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ +I +++ + L+ + + + I SL + + + K+LK+ FG+ I+
Sbjct: 421 D-LIKDGFNSEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIEIS 476
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 477 KANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNE 533
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP VE
Sbjct: 534 VENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVVEK 589
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+IS
Sbjct: 590 VIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANIS 649
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
V D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG +A
Sbjct: 650 VVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIA 709
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
W++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 710 WSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVDNN 758
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E LE
Sbjct: 759 IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILETLE 800
>gi|331084834|ref|ZP_08333922.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410928|gb|EGG90350.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 885
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 215/674 (31%), Positives = 340/674 (50%), Gaps = 39/674 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL Y S +I Y+ YM LDS++ R L + E+ + K SL +
Sbjct: 239 AAGALLKYLYETQKTSLSHITHITGYATGRYMLLDSSSRRNLELCETLREKQKRGSLLWV 298
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L +++QPL+D +EI RL+ V+ D R+++R++L + D+ER
Sbjct: 299 LDKTKTA-MGARMLRSYIEQPLIDRHEIEQRLEAVEELKDKAISREEIREYLSPVYDLER 357
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + + A + ++ S LP+I+ L + + I E LD LE L L
Sbjct: 358 LISRVTYQSANPRDLISFRNSLEMLPHIKYILTEMHEELLQQICEE-LDTLEDLYQ--LL 414
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
N+ I L E G +I YD + L+ + + + L ++ +
Sbjct: 415 NESIM---EEPPLAMKEGG--IIKDGYDADVDMLRQAKTEGKNWLAQLEEEEREKTGI-- 467
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+ LK+ FG+ +T + + T + +T + +F +LK+L D
Sbjct: 468 -RNLKVKYNKVFGYYLEVTNAYKELVPDYYTRK----QTLANAERFITPRLKELEDTILG 522
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
++ + L +V + + A ++++DV S A +A Y RP IN
Sbjct: 523 AEDKLYALEYTLYCKVRDRIASEVLRVQKTAKAVAKIDVFTSLALVAER--NNYVRPKIN 580
Query: 620 PPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
+ DI +G RHP VE N FI ND L K+ IITGPNM GKST++RQ +
Sbjct: 581 EKGLIDI--KGGRHPVVEKMTPDNMFIANDTLLDDKKNRVSIITGPNMAGKSTYMRQSAL 638
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
+LMAQ+GSFVP D A+I + D IF RVGA D G STFM EM E A+IL+ AT SL
Sbjct: 639 IVLMAQIGSFVPADSANIGICDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSSSL 698
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQ 796
+I+DE+GRGTST+DG +AWA+ EH+ + + A TLFATH+HELT L +
Sbjct: 699 LILDEIGRGTSTFDGLSIAWAVVEHISNKKLLGAKTLFATHYHELTELE---------GK 749
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ V NY ++ + + L K+ G D+S+GI VA+ A PESV+ A+E EL
Sbjct: 750 LDSVNNYCIA--VKEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPESVIARAKEIVGEL 807
Query: 857 EDFTPSAVISD-DAKIEVGSKRKRISDPNDMSR----GAARAHQFLKEFSDMPLETMDLK 911
+ + + + A+ R++ D D+++ + L+E ++ + +
Sbjct: 808 SEADITTKVREISAQGSETKARQKKYDEVDLAQISLFDTVKDDDVLEELKEIDVSNLTPM 867
Query: 912 EALERVKRMKDDLE 925
+AL + R+++ L+
Sbjct: 868 DALNTIYRLQNKLK 881
>gi|73669015|ref|YP_305030.1| DNA mismatch repair protein MutS [Methanosarcina barkeri str.
Fusaro]
gi|90109848|sp|Q46CE2.1|MUTS_METBF RecName: Full=DNA mismatch repair protein MutS
gi|72396177|gb|AAZ70450.1| DNA mismatch repair protein MutS [Methanosarcina barkeri str.
Fusaro]
Length = 900
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 266/888 (29%), Positives = 414/888 (46%), Gaps = 88/888 (9%)
Query: 37 FFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLLLER 96
FF D+Y + GE+A IAK T TA + +G + + + + +T L+ +
Sbjct: 25 FFRMGDFYESFGEDAKTIAKELEITLTARGKDKSG-ERMPLAGIPYHAIDTYLPRLINKG 83
Query: 97 TDHTL-ELYEGSGSNWRLVKSG-----TPGNLGSYEDVLFA---NNEMQDTPVIVALFPN 147
+ E E +VK G TPG + + +F+ NN + P
Sbjct: 84 YKVAICEQLEDPKKAKGIVKRGVVRVVTPGT--AIDSSMFSDASNNYLMAVAGREIGKPG 141
Query: 148 FR-ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECK 206
EN IG+ ++D++ +F D +F + S L + EC+LP+ ++
Sbjct: 142 KNAENEFEIGVSFLDISTGEFLTTQFRDSENFEKLLSELARMRPSECILPSSLYENP--- 198
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAP-GALG--- 262
L ER + + +VQ+ + G+ E L + F +A +G
Sbjct: 199 -----------ALAER----LRAQTIVQEFAPDISGAKEAGERLKNHFRVATLEGMGCEN 243
Query: 263 ---------ALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
A L YA+ +R YS +M LDS +R L ++++ D
Sbjct: 244 LDFAVYSAWAALEYAQTTQMRELTHINTLRTYSNSEFMILDSVTLRNLEIVKNVRDEGDE 303
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL+ ++N T T MG R L WL +PLL V +IN RLD V+ LR DLR L
Sbjct: 304 NSLYRILNHTKTP-MGSRALKKWLLKPLLSVEKINYRLDAVEELTAKPLLRYDLRNWLSD 362
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
+ DIERL+ + + + +V L +S LP +R +L + S I L S
Sbjct: 363 VRDIERLVGRVVYGNSNARDLVALKKSLEALPPVRDSLLE---NIESTILNDIAVGLASF 419
Query: 434 TDDDHLNKFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
++ ++L + I A+V+ + E G MI S Y+ L LK+ + + I + ++
Sbjct: 420 SELENLAEMIDRAIVDEP-PISVREGG--MIKSGYNAELDELKDIASNSRQWIANFQQKE 476
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+ K+LK+ FG+ +T ++ + +I +T + +F +LK
Sbjct: 477 RERSGI---KSLKVGYNKIFGYYIEVTNANSSQVPE----DYIRKQTMANAERFFTPELK 529
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
+ E+ + E+ ++QT S + A + LDVL A++A +
Sbjct: 530 EKESLILTANEKAIALEYEIFTEILQTLSAHSRELQETAERIGTLDVLTDLAEVAEN--N 587
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKST 671
Y RP + D I++ RHP VE F+PND ++ ++ F ++TGPNM GKST
Sbjct: 588 NYIRPQLT--DDCKILIRDGRHPVVENTVHGGFVPNDTEMDCKENQFLLVTGPNMAGKST 645
Query: 672 FIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 731
++RQ + +MAQVGSFVP ASI + D +F R+GA D G STFM EM+E A+IL
Sbjct: 646 YMRQTALIAIMAQVGSFVPASYASIGIIDQVFTRIGAFDDLASGQSTFMVEMVELANILN 705
Query: 732 GATDRSLIIIDELGRGTSTYDGFGLAWAICE--HLVEEIRAPTLFATHFHELTALAHENA 789
A+ RSL+++DE+GRGTSTYDG+ +A A+ E H ++ LFATH+H+LTAL
Sbjct: 706 NASPRSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVGVRALFATHYHQLTAL----- 760
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
+++ V NYHV+ + +L L K+ PGA D+S+GI VA A PE V+ A
Sbjct: 761 ----EEKLKRVKNYHVA--VKEEGHELVFLRKIVPGATDRSYGIQVARLAGVPEKVIERA 814
Query: 850 REKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFL 897
E ELE + D G KRK S+ AR Q +
Sbjct: 815 NEILKELERENVLEEVEDSKN---GKKRK--------SKATARYTQMM 851
>gi|448607730|ref|ZP_21659683.1| DNA mismatch repair protein MutS [Haloferax sulfurifontis ATCC
BAA-897]
gi|445737667|gb|ELZ89199.1| DNA mismatch repair protein MutS [Haloferax sulfurifontis ATCC
BAA-897]
Length = 928
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 235/728 (32%), Positives = 355/728 (48%), Gaps = 83/728 (11%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
T GL VD++ E L T + AL AL E L P E V +C L D
Sbjct: 167 TYGLAVVDVST-----GECL----VTGADRAL-ALEELERLAPAELVVGPDCD-LPD--- 212
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
+ + +T F+ D R + P D V + A+GA L+YAE
Sbjct: 213 ----LSFDPMETPFEPAAFDADAARETLSAYAPRPDAVVESDAELRAVGAALAYAEYAQG 268
Query: 274 ESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKR 331
+S Y R D +++LD+ A+R+L + ES++ A +LF +++ T A +G+R
Sbjct: 269 DSKLA-YVTRVTRFDPREFLQLDATAIRSLELFESRS-ARAGSTLFSVLDETACA-LGRR 325
Query: 332 LLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGL 391
L WL++PL+D + I ARLD V A DD R DLR HL + D+ERL+ + + RA
Sbjct: 326 RLEAWLRRPLVDRDRIEARLDAVDALCDDALARADLRDHLSSVYDLERLVARVSRERADA 385
Query: 392 QQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD 451
+ + L + R+P IR AL + + +++ LD LE + D LV +V
Sbjct: 386 RDLRSLKTTLDRVPEIREALAGTDSDLLADLRDS-LDELEDVRD---------LVGDAVV 435
Query: 452 LDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKALKL 505
D E G +I+ +D L ++ E+ + +L +Q + +D +L++
Sbjct: 436 SDPPQEITEGG--VIADGFDAELDEVRGTAEAGREWVSNLEAREQERTGID-----SLEV 488
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
G+ +T P + ++ + +T K+ +F +LK+ D+ + +
Sbjct: 489 GYNQVHGYYIEVTN---PNL-DRVPDDYQRRQTLKNSERFYTPELKEREDEILRASDRAD 544
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN------ 619
+ +L V T S +++A L++LDVL + AD+A + Y RP+ +
Sbjct: 545 ALEYDLFCEVRADVATESARIQAVADALADLDVLRTLADVAVA--NDYARPEFHGDAASS 602
Query: 620 ---------PPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
+ G I ++ RHP VE AQD F+PN L RG ++TGPNM GK
Sbjct: 603 AGSTDEAGATGEAGGIHIDAGRHPVVERAQD--EFVPNPAALPRGS--VALVTGPNMSGK 658
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST++RQV + ++AQVG FVP A + V D +F R+GA D G STFM+EM E I
Sbjct: 659 STYMRQVALVCVLAQVGGFVPAKSAELPVLDRVFTRIGASDDIAGGQSTFMREMSELTEI 718
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENA 789
L AT SL+++DE+GRGTST DG +A A E L +E+ A TLFATH+H+LT A +
Sbjct: 719 LHNATGDSLVLLDEVGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDRE 778
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
GV N H +A ++T L+ V G S+G+ VA+ A P SVV A
Sbjct: 779 ---------GVFNLHFTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPASVVGRA 827
Query: 850 REKAAELE 857
R E E
Sbjct: 828 RSLVDETE 835
>gi|397690923|ref|YP_006528177.1| DNA mismatch repair protein MutS [Melioribacter roseus P3M]
gi|395812415|gb|AFN75164.1| DNA mismatch repair protein MutS [Melioribacter roseus P3M]
Length = 872
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 210/686 (30%), Positives = 342/686 (49%), Gaps = 49/686 (7%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+ +A A GA L+Y + I Y+ YM LD A R L +L +
Sbjct: 224 IENMNLAVSAAGAALNYLRETQKANLPHINRISVYNPTEYMALDYATKRNLEILFTIQSG 283
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+ SL ++++T T+ MG RLL W+ PL + I R + V+ ++ +LR++LR+
Sbjct: 284 EREGSLISILDKTSTS-MGGRLLKRWITTPLKKLEPILKRQECVEELFENKSLRKNLREE 342
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL 430
L I DIERL+ R ++++ L S ++ I+ L Q + I + ++PL
Sbjct: 343 LSEIGDIERLIARACTGRINPREVINLKNSLKKIHLIKQLLDQSSAETLRQINDN-MNPL 401
Query: 431 ESLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
E L +A +E +++ + L +G +I Y+ L L++ + + I +L
Sbjct: 402 EEL---------VAKIENAINEEPPASLHDGG-VIKPGYNPELDELRSLAFNAKEWIANL 451
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
K+ + +LK+ FG+ I+ + K+ +I +T + ++
Sbjct: 452 QKEERQKTGV---SSLKVSYNKVFGYYIEISHAN----KDKVPAHYIRKQTLVNSERYIT 504
Query: 548 TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
+LK+ ++ + + EL ++ +E ++ A +++ LD LSFA+ A
Sbjct: 505 PELKEYEEKILNAQDNIAKLEFELFEQIRYQIAAATERVQTNARLIAMLDCFLSFAECAE 564
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPN 665
Y +P ++ D I + RHP VE F PN C+L + I+TGPN
Sbjct: 565 QYN--YVKPTVD--DSDVIDIVDGRHPVVEQILPPGEKFTPNSCRLSSSEDQIIILTGPN 620
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKS ++RQ+G+ +LMAQ+GS+VP A I + D IF RVGA D G STF+ EM E
Sbjct: 621 MAGKSVYLRQIGLIVLMAQIGSYVPAKEARIGIVDRIFTRVGASDNITTGESTFLVEMQE 680
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTA 783
A+IL AT++SLI++DE+GRGTST+DG +AWAI E+L E EI A TLFATH+HEL
Sbjct: 681 AANILNNATNKSLILLDEIGRGTSTFDGISIAWAITEYLHENPEIAAKTLFATHYHELNE 740
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
+A + + NY V + K+ L+KV+PG D S+GI VA+ A P
Sbjct: 741 MA---------EIFPRIKNYKVD--VREYGDKVIFLHKVKPGGADHSYGIQVAQMAGLPV 789
Query: 844 SVVTLAREKAAELE--DFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFS 901
V A+E LE + TP + + R R +D +S + + KE
Sbjct: 790 YVTNRAKEILLNLESKELTPYEIKKEKI------SRIRKNDEMQISLFEMKDEELRKEIE 843
Query: 902 DMPLETMDLKEALERVKRMKDDLEKD 927
D+P++++ EAL ++ +K ++++
Sbjct: 844 DLPIDSITPIEALNKLNELKRKIKEE 869
>gi|222055849|ref|YP_002538211.1| DNA mismatch repair protein MutS [Geobacter daltonii FRC-32]
gi|221565138|gb|ACM21110.1| DNA mismatch repair protein MutS [Geobacter daltonii FRC-32]
Length = 870
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 226/727 (31%), Positives = 351/727 (48%), Gaps = 72/727 (9%)
Query: 150 ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLR 209
++G GL Y+DL+ L E DS V + + +G +E LLP+ + + K L
Sbjct: 134 DDGNRWGLSYLDLSTGEFRLTEL--DS-LDAVVAEIACVGPREILLPSFFRDNGKMKEL- 189
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDLD---RLVRGSVEPVR-------DLVSGFEIAPG 259
A G+++T D V D + RL+ G LVSG
Sbjct: 190 -ARATAGLVVTH-------VEDWVYDHEYCRRLLAGHFAGASPSSLGCDGLVSGLY---- 237
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+GA+L Y + I+ Y+ ++ LD A R L + + + + SL GL
Sbjct: 238 AVGAVLHYLQETQKGKAAHVTSIKAYTNAEHLLLDEATRRNLELTATLAEGKRKGSLLGL 297
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
M+RT TA MG R + W+ PL+ I R D V+A + D R ++ L + D+ER
Sbjct: 298 MDRTTTA-MGGRKIKQWINYPLVTNRGITDRQDAVEALLQDAGSRAEIAALLNGVYDLER 356
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + AG + +V + S R+P I+ L + + + E L+PL L
Sbjct: 357 LNGRISLASAGAKDLVAMKDSLARIPAIKEVLVAFSSNLLAGLNEG-LNPLPEL------ 409
Query: 440 NKFIALVETSVDLDQLENGEY------MISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
I L+E + +EN + +I+ Y+ L L+ + I L Q
Sbjct: 410 ---IELIERGI----VENPPFVLREGGIIADGYNAELDELRAISREGKGFIARLEAQEKK 462
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ +LK+ FG+ +T+ I +I +T + ++ +LK+
Sbjct: 463 RTGI---SSLKIRYNKVFGYYIEVTRTNLDSI----PADYIRKQTLANAERYITPELKEY 515
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
D+ + ++ + L + + A + A L+ +DVL+S A+LA Y
Sbjct: 516 EDKVLGAEDRIRDLEFSLFQEIREAAAGHGNLIARTADCLATVDVLVSLAELAHE--NNY 573
Query: 614 TRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
RP ++ D ++ + RHP +EA F+PND L ++ +ITGPNM GKSTF
Sbjct: 574 CRPKVD--DGTNLAIVDGRHPVIEALNQGERFVPNDTLLDNDENQIIVITGPNMAGKSTF 631
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQV + +LMA +GSFVP A I + D IF RVGA D RG STFM EM+E A+IL+
Sbjct: 632 MRQVALIVLMAHMGSFVPATEARIGMVDRIFTRVGASDNLARGQSTFMVEMMEAANILRN 691
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENAN 790
AT +SL+I+DE+GRGTST+DG +AWA+ E+L + E A TLFATH+HELT L+
Sbjct: 692 ATPKSLVILDEIGRGTSTFDGVSIAWAVAEYLHDNGEHAAKTLFATHYHELTELS----- 746
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
T++ + N++++ + + ++ L K+ PG S+GI VA A P V+ A+
Sbjct: 747 --VTRRR--IKNFNIA--VKEWNEQIIFLRKIVPGGASHSYGIQVARLAGLPLEVIERAK 800
Query: 851 EKAAELE 857
E LE
Sbjct: 801 EILVNLE 807
>gi|423581980|ref|ZP_17558091.1| DNA mismatch repair protein mutS [Bacillus cereus VD014]
gi|401212859|gb|EJR19600.1| DNA mismatch repair protein mutS [Bacillus cereus VD014]
Length = 890
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 348/661 (52%), Gaps = 77/661 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTIMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEVGSKRKRISDPNDM 886
+S++ A+E A+LE + TP AV+ + +E+ + + + +
Sbjct: 776 DSLIARAKEVLAQLEGQEEIIIPKRTEVKVQEVTPDAVVVKEEPVEIQETKVEAEEESQL 835
Query: 887 S 887
S
Sbjct: 836 S 836
>gi|325661608|ref|ZP_08150232.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472135|gb|EGC75349.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
Length = 876
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 215/674 (31%), Positives = 340/674 (50%), Gaps = 39/674 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL Y S +I Y+ YM LDS++ R L + E+ + K SL +
Sbjct: 230 AAGALLKYLYETQKTSLSHITHITGYATGRYMLLDSSSRRNLELCETLREKQKRGSLLWV 289
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L +++QPL+D +EI RL+ V+ D R+++R++L + D+ER
Sbjct: 290 LDKTKTA-MGARMLRSYIEQPLIDRHEIEQRLEAVEELKDKAISREEIREYLSPVYDLER 348
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + + A + ++ S LP+I+ L + + I E LD LE L L
Sbjct: 349 LISRVTYQSANPRDLISFRNSLEMLPHIKYILTEMHEELLQQICEE-LDTLEDLYQ--LL 405
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
N+ I L E G +I YD + L+ + + + L ++ +
Sbjct: 406 NESIM---EEPPLAMKEGG--IIKDGYDADVDMLRQAKTEGKNWLAQLEEEEREKTGI-- 458
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+ LK+ FG+ +T + + T + +T + +F +LK+L D
Sbjct: 459 -RNLKVKYNKVFGYYLEVTNAYKELVPDYYTRK----QTLANAERFITPRLKELEDTILG 513
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
++ + L +V + + A ++++DV S A +A Y RP IN
Sbjct: 514 AEDKLYALEYTLYCKVRDRIASEVLRVQKTAKAVAKIDVFTSLALVAER--NNYVRPKIN 571
Query: 620 PPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
+ DI +G RHP VE N FI ND L K+ IITGPNM GKST++RQ +
Sbjct: 572 EKGLIDI--KGGRHPVVEKMTPDNMFIANDTLLDDKKNRVSIITGPNMAGKSTYMRQSAL 629
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
+LMAQ+GSFVP D A+I + D IF RVGA D G STFM EM E A+IL+ AT SL
Sbjct: 630 IVLMAQIGSFVPADSANIGICDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATSSSL 689
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQ 796
+I+DE+GRGTST+DG +AWA+ EH+ + + A TLFATH+HELT L +
Sbjct: 690 LILDEIGRGTSTFDGLSIAWAVVEHISNKKLLGAKTLFATHYHELTELE---------GK 740
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ V NY ++ + + L K+ G D+S+GI VA+ A PESV+ A+E EL
Sbjct: 741 LDSVNNYCIA--VKEQGDDIVFLRKIVKGGADKSYGIQVAKLAGVPESVIARAKEIVGEL 798
Query: 857 EDFTPSAVISD-DAKIEVGSKRKRISDPNDMSR----GAARAHQFLKEFSDMPLETMDLK 911
+ + + + A+ R++ D D+++ + L+E ++ + +
Sbjct: 799 SEADITTKVREISAQGSETKARQKKYDEVDLAQISLFDTVKDDDVLEELKEIDVSNLTPM 858
Query: 912 EALERVKRMKDDLE 925
+AL + R+++ L+
Sbjct: 859 DALNTIYRLQNKLK 872
>gi|449981704|ref|ZP_21817909.1| DNA mismatch repair protein MutS [Streptococcus mutans 5SM3]
gi|449175600|gb|EMB78006.1| DNA mismatch repair protein MutS [Streptococcus mutans 5SM3]
Length = 849
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 355/732 (48%), Gaps = 77/732 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LPAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDCPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ R+ ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMRIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKM- 787
Query: 861 PSAVISDDAKIE 872
SA +S + K E
Sbjct: 788 -SAAVSVNLKNE 798
>gi|291459239|ref|ZP_06598629.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418493|gb|EFE92212.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 078
str. F0262]
Length = 900
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 214/590 (36%), Positives = 310/590 (52%), Gaps = 56/590 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
IR+Y +M LDSA+ R L + E+ + K SL +++RT TA MG RLL +L+QPL
Sbjct: 259 IRRYQSSQFMILDSASQRNLELTETLREKKKRGSLLWVLDRTRTA-MGARLLRRFLEQPL 317
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+DV EI R D V+ R++L ++L I D+ERL+ + + A + ++ QS
Sbjct: 318 IDVGEIRRRQDAVEELCSHYIEREELSEYLNTIYDLERLLGRISYQSANPRDLLAFKQSL 377
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFI--ALVETSVDLDQLENGE 459
LP IR QQ G S LI+E Y + ++ L+D L + I ALVE L + G
Sbjct: 378 RLLPDIR---QQISGFHSELIREIY-EEMDELSD---LYQLIDEALVEDP-PLSARDGG- 428
Query: 460 YMISSSY----DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
+I Y D A K +E L S ++T K+L++ FG+
Sbjct: 429 -LIREGYHEEADHFRLARKKGKEWLAELESSEREKTGI-------KSLRIRYNRIFGYCI 480
Query: 516 RITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL------GDQYQKVLEEYKNCQK 569
++ + + FI +T ++T +L++L ++ LE CQ
Sbjct: 481 EVSNS----FKNLVPDYFIRKQTLTGAERYTTDRLEELQNEILGAEEKLNALEYGIFCQ- 535
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
L +R+ + + + +A LD +LS + +A+ Y RP IN G I +
Sbjct: 536 -LRDRIAENIPRVQKSSREIAL----LDCMLSLSRVAAE--RGYVRPKINSE--GRIRIR 586
Query: 630 GSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
RHP VE F+ ND L +G+ IITGPNM GKST++RQV + +LMA +GSF
Sbjct: 587 EGRHPVVERLLREGMFVSNDTLLDKGEERISIITGPNMAGKSTYMRQVALIVLMASIGSF 646
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VP + A I+V D IF RVGA D G STFM EM E A+IL+ A+ SL+I+DE+GRGT
Sbjct: 647 VPAEEADIAVCDRIFTRVGASDDLASGQSTFMVEMNEVANILRNASADSLLILDEIGRGT 706
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
ST+DG +AWA+ E+L + ++A TLFATH+HELT L ++ GV NY V+
Sbjct: 707 STFDGLSIAWAVVEYLSQMVKAKTLFATHYHELTEL---------EGRLPGVNNYCVA-- 755
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
+ + L K+ PG DQS+GI VA A P V+ A+E + EL D
Sbjct: 756 VSKHDEDIIFLRKIIPGGADQSYGIDVAGLAGVPSPVIERAKEISRELSD 805
>gi|400291073|ref|ZP_10793100.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
gi|399921864|gb|EJN94681.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
Length = 849
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 231/766 (30%), Positives = 374/766 (48%), Gaps = 83/766 (10%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEF 172
+V+ TPG L ANN +VAL +G GL Y+DL+
Sbjct: 106 VVQVITPGTLVDSAKPDSANN------FLVAL----DTDGSRFGLSYMDLSTGEFYATTL 155
Query: 173 LDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEF-KTRD 231
D T V S ++ L +E +L G L E + F K +
Sbjct: 156 AD---LTAVRSEVLNLKARELVL--------------------GFDLDEEAENIFRKQMN 192
Query: 232 LVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
L+ +++ V + + ++ E+A A G LL Y + Y + Y+
Sbjct: 193 LLLSVEKTVYEDLHLLDSQLTDLELA--AAGKLLQYVHTTQKRELSHLQKLVHYEIKDYL 250
Query: 292 RLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARL 351
++ +L++LE+ K+ SL+ L++ T TA MG RLL W+ +PL+ I+ R
Sbjct: 251 QMTYTTKSSLDLLENARSGKKHGSLYWLLDETKTA-MGTRLLRTWIDRPLVSHKLISKRQ 309
Query: 352 DIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
DI+Q F+D R DL LK + DIERL + +A + +++L Q+ ++P I++ L
Sbjct: 310 DIIQVFLDQFFERSDLSDSLKGVYDIERLASRVSFGKANPKDLLQLGQTLAQVPIIKAIL 369
Query: 412 QQYEG-QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ---LENGEYMISSSYD 467
+ ++ L+ + +DPL L + L+ +++D + + G +I + +D
Sbjct: 370 ESFDSPALEDLVGQ--IDPLPELEE---------LIRSAIDPNAPMTITEGS-IIRAGFD 417
Query: 468 TGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
L + I + ++TAS + LK+D + G+ F +T +
Sbjct: 418 ETLDKYRKVMREGTGWIADIEAKERTASGI-----STLKIDYNKKDGYYFHVTNSNLSLV 472
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
+ F T K+ +F +L K+ + + EE N + ++ R+ T+ E
Sbjct: 473 PE----YFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYDIFMRIRAQVETYIER 528
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNF 644
++LA L+ +DVL S A +A + Y RP N + I +E RH +E +
Sbjct: 529 LQTLAKYLATVDVLQSLAVVAEN--NHYVRPVFNDDKI--ISIENGRHAVIEKVMGSQEY 584
Query: 645 IPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFA 704
IPN + K+ Q+ITGPNM GKST++RQ+ + ++MAQ+GSFV D A++ V D IF
Sbjct: 585 IPNTIHFDQ-KTSIQLITGPNMSGKSTYMRQLALTVIMAQMGSFVAADSAALPVFDAIFT 643
Query: 705 RVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL 764
R+GA D + G STFM EM+E +K A + SLI+ DELGRGT+TYDG LA AI E++
Sbjct: 644 RIGAADDLISGQSTFMVEMMEANHAIKAADENSLILFDELGRGTATYDGMALAQAIIEYV 703
Query: 765 VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEP 824
++I+A T+FATH+HELT L + + + N HV+ + ++T L+K+
Sbjct: 704 HDKIKAKTMFATHYHELTDL---------STTLTDLVNVHVATL--EKNGEVTFLHKITD 752
Query: 825 GACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAK 870
G D+S+GIHVA+ A P ++ A A+LE SA +S + K
Sbjct: 753 GPADKSYGIHVAKIAGLPRDLLNRADHILADLE--KTSAAVSVNLK 796
>gi|423635458|ref|ZP_17611111.1| DNA mismatch repair protein mutS [Bacillus cereus VD156]
gi|401278209|gb|EJR84145.1| DNA mismatch repair protein mutS [Bacillus cereus VD156]
Length = 890
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 348/661 (52%), Gaps = 77/661 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEVGSKRKRISDPNDM 886
+S++ A+E A+LE + TP AV+ + +E+ + + + +
Sbjct: 776 DSLIARAKEVLAQLEGQEEIIIPKRTEVKVQEVTPDAVVVKEEPVEIQETKVEAEEESQL 835
Query: 887 S 887
S
Sbjct: 836 S 836
>gi|354569173|ref|ZP_08988330.1| DNA mismatch repair protein mutS [Fischerella sp. JSC-11]
gi|353538923|gb|EHC08428.1| DNA mismatch repair protein mutS [Fischerella sp. JSC-11]
Length = 873
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 260/899 (28%), Positives = 414/899 (46%), Gaps = 114/899 (12%)
Query: 15 AKQARGFLSFYKTLPNDTRAVRFFDRRDYYTAHGENATFIAKTY--YHTTTALRQLGTGS 72
+K + F + +T AV + D++ + E+A +A+ Y T+ + ++G
Sbjct: 29 SKLTQMFQHYVETKEKYPHAVLLYRVGDFFECYFEDAVILAQELELYLTSKPVGEVGR-- 86
Query: 73 DALSSVSVSKNMFETIARDLLLER------TDHTLELYEGSGSNWR--LVKSGTPGNLGS 124
+S V + +E A +L+E+ D + E G R + + TPG L
Sbjct: 87 --VSMSGVPHHAWERHA-TVLVEKGYAVVICDQVEDAAEAVGRLVRREVTRILTPGTLLE 143
Query: 125 YEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFL--DDSHFTNVE 182
E +L A+ V++A G GL Y D++ EFL S ++
Sbjct: 144 -EGMLKASRNNYLAAVVIA--------GEHWGLAYADIST-----GEFLTTQGSSSEHLT 189
Query: 183 SALVALGCKECLLPT-------------------EAVKSSECKTLRDALTRCGVMLTERK 223
L+ L E L+PT E + + C LR L R
Sbjct: 190 QELMRLQPAEVLVPTNAPDLGSLLRPGEKSDHLPECLPPAFCYALRSQLPFSAGEARSRL 249
Query: 224 KTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIR 283
+FK R L + L +A A G LL Y E E++ +R
Sbjct: 250 LQKFKVRSL-EGLG-------------CEHLPLAVRAAGGLLEYLEDTQKENSIPLQLLR 295
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
Y++ YM +D R L + ++ D + + SL ++RT TA MG R L WL QPLLD
Sbjct: 296 TYTITDYMIVDHQTRRNLEITQTVRDGSFHGSLLWALDRTSTA-MGSRALRRWLLQPLLD 354
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+ I AR D +Q V++T LRQDLRQ L++I D+ERL RA + +V L S +
Sbjct: 355 IKGIRARQDTIQELVENTPLRQDLRQLLRQIYDLERLTGRAGSGRANAKDLVALADSVSK 414
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDP-LESLTDDDHLNKFIALVETSVDLDQLENGEYMI 462
LP + + F +++ + P LE L K + + S + E G +I
Sbjct: 415 LPELALLVMDTASPFLKALQK--VPPGLEELG-----QKIRSYIVESPPIHIKEGG--LI 465
Query: 463 SSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
+ L A + E ++ I +L + + + + LK+ FG+ I++ +
Sbjct: 466 RQGVNPQLDARRALVEEDQKWIANLEVEERARTGI---QTLKVGFNKTFGYYISISRAKV 522
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTF 582
++ + +I +T + ++ +LK+ + ++ + E+ + +
Sbjct: 523 DQV----PSNYIRKQTLTNEERYITPELKEREARILTARDDLNQMEYEIFVALREEVAAQ 578
Query: 583 SEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV 642
+E+ ++L+ ++ +DVL A+LA Y RP++ + +I + RHP VE +
Sbjct: 579 AEVIRNLSRAVAAVDVLCGLAELAVY--QGYCRPEMV--EGREIYVVDGRHPVVEQSLPM 634
Query: 643 NF-IPNDCKL----------------IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
F +PN +L R I+TGPN GKS ++RQVG+ LMAQ+
Sbjct: 635 GFFVPNSTQLGGMNRHDAKDAKEEEEERVSPDLIILTGPNASGKSCYLRQVGLIQLMAQI 694
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
GSFVP A +SV D IF RVGA D G STFM EM ETA+IL AT RSL+++DE+G
Sbjct: 695 GSFVPARYAKLSVCDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATSRSLVLLDEIG 754
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGT+T+DG +AWA+ E+L EI A T+FATH+HEL LA N VANY V
Sbjct: 755 RGTATFDGLAIAWAVAEYLAAEIGARTIFATHYHELNELASLLPN---------VANYQV 805
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
+ + ++ L++V+PG D+S+GI A P V+ A++ ++E + A+
Sbjct: 806 T--VKELPDQIIFLHQVQPGGADKSYGIEAGRLAGLPGVVIQRAKQVMGQIEKHSKIAI 862
>gi|228922484|ref|ZP_04085786.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837198|gb|EEM82537.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 884
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 348/661 (52%), Gaps = 77/661 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEVGSKRKRISDPNDM 886
+S++ A+E A+LE + TP AV+ + +E+ + + + +
Sbjct: 770 DSLIARAKEVLAQLEGQEEIIIPKRTEVKVQEVTPDAVVVKEEPVEIQETKVEAEEESQL 829
Query: 887 S 887
S
Sbjct: 830 S 830
>gi|449919045|ref|ZP_21797681.1| DNA mismatch repair protein MutS [Streptococcus mutans 1SM1]
gi|449159742|gb|EMB63054.1| DNA mismatch repair protein MutS [Streptococcus mutans 1SM1]
Length = 849
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 220/726 (30%), Positives = 353/726 (48%), Gaps = 75/726 (10%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+DL+ D + V S ++ L +E ++
Sbjct: 134 DGSQFGLSYMDLSTGEFYATTLAD---LSAVRSEVLNLKARELVI--------------- 175
Query: 211 ALTRCGVMLTERKKTEF-KTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAE 269
G L+E ++ F K +L+ ++ V V + D + E+A A G LL Y
Sbjct: 176 -----GFELSENEEQLFRKQMNLLLSFEKTVYDDVHLLDDQLKAIELA--AAGKLLQYVH 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG
Sbjct: 229 NTQKRELSHLQKLVHYEIKDYLQMAYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PL+ + I+ R DI+Q F+D R DL LK + DIERL + +A
Sbjct: 288 TRLLRTWIDRPLVSSSLISKRQDIIQTFLDHFFERSDLSDSLKGVYDIERLASRVSFGKA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-DHLNKFIALVET 448
+ +++L Q+ ++P I++ L+ + LESL + D L + AL+ +
Sbjct: 348 NPKDLLQLGQTLSQVPVIKTILESFASS-----------SLESLINQIDTLPELEALIRS 396
Query: 449 SVD----LDQLENGEYMISSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDK 501
++D + E G MI +D L + E S I + +Q +
Sbjct: 397 AIDSNAPITITEGG--MIREGFDETLDKYRTVMREGTSWIADIETKERQKSGI------S 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
LK+D + G+ F +T + F T K+ +F +L K+ + +
Sbjct: 449 TLKIDYNKKDGYYFHVTNSNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAR 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
EE N + ++ + ++ E ++LA L+ +DVL S A +A + Y RP N
Sbjct: 505 EESANLEYDIFMCIRSQVESYIERLQNLAKSLATVDVLQSLAVVAEN--NHYVRPSFNHQ 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+I +E RH VE +IPN + K+ Q+ITGPNM GKST++RQ+ + +
Sbjct: 563 Q--EISIENGRHAVVEKVMGSQEYIPNTINFDQ-KTSIQLITGPNMSGKSTYMRQLALTV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+GSFV D A + + D IF R+GA D + G STFM EM+E +K AT SLI+
Sbjct: 620 IMAQLGSFVAADSADLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIKAATPNSLIL 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DELGRGT+TYDG LA AI E++ ++ A TLFATH+HELT L + ++ +
Sbjct: 680 FDELGRGTATYDGMALAQAIIEYIHNKVGAKTLFATHYHELTDL---------STRLTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
N HV+ ++T L+K+ G D+S+GIHVA+ A P+ ++ A +LE +
Sbjct: 731 VNVHVATL--EKDGEVTFLHKIADGPADKSYGIHVAKIAGLPKDLLNRADHILVDLEKMS 788
Query: 861 PSAVIS 866
+ +S
Sbjct: 789 AAVSVS 794
>gi|283782023|ref|YP_003372778.1| DNA mismatch repair protein MutS [Pirellula staleyi DSM 6068]
gi|283440476|gb|ADB18918.1| DNA mismatch repair protein MutS [Pirellula staleyi DSM 6068]
Length = 869
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 233/747 (31%), Positives = 349/747 (46%), Gaps = 59/747 (7%)
Query: 118 TPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSH 177
TPG L +D L E +V P+ + +GL + DL+ A F
Sbjct: 107 TPGTL--TDDALLDPRESNYLAAMV--LPDTLQPHTPVGLAWADLSTGRFQAAVF----P 158
Query: 178 FTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDL- 236
F + L L ECLL + + R +M+T R + F RD Q +
Sbjct: 159 FARLGDELARLQPSECLLGDDQPPPTCPFPPR-------MMITRRPEWTF-ARDTSQAVL 210
Query: 237 -DRLVRGSVEPVRDLVSGFE----IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
+L S+E GF+ +A A G +L Y S + Y +
Sbjct: 211 QKQLQVASLEGF-----GFDESDMLAIRAAGGILEYLRETQKTSLDHIDRLLPYRSGESL 265
Query: 292 RLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARL 351
+D A R+L + + + SL ++++T T G RLL W+ PL ++ I AR
Sbjct: 266 EIDEATRRSLEITRTFRSGAREGSLLSVIDQTITPP-GSRLLADWVGAPLTNLAAIGARQ 324
Query: 352 DIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
D V+ + +R+ +R+ L + D+ERL+ + RA + + + ++ RLP +++ +
Sbjct: 325 DAVELLRNSATVRRQIREELAGVYDLERLIARVTTLRASPRDLAFVGRTLARLPQLKALV 384
Query: 412 QQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLS 471
++ LD L++ D+ + + D L I + L
Sbjct: 385 AH--------LRAPLLDDLQTRLDESPALRDLLAAALEDDCPLLARDGNFIRQGFHGELD 436
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
L+ + I +P LK+ FG+ IT + ++K
Sbjct: 437 RLREMAHGGKAWIARYQADQIEKTGIP---NLKVAFNKVFGYYIEITNAQ----KEKTPP 489
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
++I +T ++ +LK+ ++ E K + +L + F+ + A
Sbjct: 490 EYIRKQTVASAERYITPELKEYEEKVLTADERSKELEYQLFVELRDKTHQFARALRMTAA 549
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCK 650
++ELDVL + A LA Y RP + V +I+ EG RHP ++A F+PND
Sbjct: 550 AIAELDVLAALAQLADR--PDYCRPVMTEDQVVEIV-EG-RHPVLDAILPRGTFVPNDTT 605
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L +ITGPNM GKST+IRQV V L+A VGSF+P RA+I + D IFARVGA D
Sbjct: 606 LGTDGGLVMLITGPNMAGKSTYIRQVAVLSLLAHVGSFLPASRATIGICDRIFARVGASD 665
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
RG STFM EM ETA IL AT RSL+I+DE+GRGTSTYDG LAWAI EHL ++I
Sbjct: 666 ELSRGQSTFMVEMTETARILNSATARSLVILDEIGRGTSTYDGISLAWAIVEHLHDQIGC 725
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQS 830
TLFATH+HELT LA + GV N V+ + ++ +L+K+ PGA D+S
Sbjct: 726 RTLFATHYHELTDLA---------GSLAGVRNLSVA--VREWQDQVVLLHKIVPGAADKS 774
Query: 831 FGIHVAEFANFPESVVTLAREKAAELE 857
+GIH A A P SV A++ A+LE
Sbjct: 775 YGIHCARLAGVPRSVNERAKQILAKLE 801
>gi|219668762|ref|YP_002459197.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense
DCB-2]
gi|219539022|gb|ACL20761.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense
DCB-2]
Length = 850
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 231/677 (34%), Positives = 337/677 (49%), Gaps = 68/677 (10%)
Query: 192 ECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLV 251
E LLP E +K+ + LT+R+K ++ L Q +L
Sbjct: 166 ELLLPAELLKAKHWRP---------YYLTQREKKTYQHTLLEQRFTEQT--------ELF 208
Query: 252 SGFEIAPGALGALLSYAELLSDESNYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKT 308
F A A L Y +L +I K Y + +M LD R L + ES
Sbjct: 209 QEFPTAMKAANGLWQY--ILETSPGIDPSHILKINAYRPEHWMLLDPWTRRNLELTESIR 266
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
K +L +++ T TA G RLL W++QPLL EI RLD V+A V+D+ LR DL
Sbjct: 267 GQGKKGTLLSVLDFTKTA-FGGRLLRRWIEQPLLLKEEIEKRLDYVEALVEDSFLRGDLI 325
Query: 369 QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLD 428
Q ++ D+ERLM + A + ++ L Q+ LP +R+ L EG+ +SL + ++
Sbjct: 326 QLFNKVFDLERLMGKVSYGTANARDLLSLAQTLGVLPQLRALLA--EGKSASL--QAFIP 381
Query: 429 PLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
LE L D L +V L+Q N E IS L A +E+ R I S
Sbjct: 382 ALEGL---DPL---------AVTLEQAINPEAPISLKDGNLLKAGYSEEIDELRSISSGG 429
Query: 489 KQTASDL-----DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
K + L D ++LK+ FG+ +T I ++I +T +
Sbjct: 430 KAWVAKLESMEKDRTGIRSLKVGYNKVFGYYIEVTHANSHLI----PAEYIRKQTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + +T + A L+E+DV S A
Sbjct: 486 RFITPELKEYEQKILGAEEKVTQLEYQLFLELRETVRGQAARILEAAHALAEIDVYASLA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQII 661
+ ++ Y+RP + + G I+EG RHP VE+ QD +F+PND L K +I
Sbjct: 546 E--AAVRHHYSRP-VMKGEGGLTIIEG-RHPVVESMLQD-TSFVPNDTILTEDKH-LALI 599
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST++RQV + +LMAQ+GSFVP +A+I + D IF RVGA D G STFM
Sbjct: 600 TGPNMAGKSTYMRQVALIVLMAQIGSFVPAQQATIPIADHIFTRVGASDDLASGQSTFMV 659
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV-EEIRAPTLFATHFHE 780
EM E A IL+ T SLII+DE+GRGT+TYDG +AWA+ E+L +E + TLFATH+HE
Sbjct: 660 EMYEVAHILRHVTPHSLIILDEVGRGTATYDGLSIAWAVAEYLAGQENKPKTLFATHYHE 719
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN 840
LT L +A G+ N HV + ++ L+K+ PG D+S+GI VA+ A
Sbjct: 720 LTDLEETHA---------GIFNLHVG--VREHGEEIVFLHKIIPGRADRSYGIQVAKLAG 768
Query: 841 FPESVVTLAREKAAELE 857
P +++ A+ ELE
Sbjct: 769 LPANLLHRAKIILHELE 785
>gi|257413988|ref|ZP_04744892.2| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
gi|257201595|gb|EEU99879.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
Length = 900
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 323/641 (50%), Gaps = 52/641 (8%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNY-YIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+S + A GALL Y + +++ GN I YS YM +DS+ R L ++E+ +
Sbjct: 246 LSDYACGTIAAGALLRYL-YETQKNDLGNLSAIHPYSTGKYMIIDSSTRRNLELVETLRE 304
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
K SL ++++T TA MG R L +++QPL+D EI R + + D R++LR+
Sbjct: 305 KQKRGSLLWVLDKTKTA-MGARTLRAYVEQPLIDKTEIELRQEAIGELNDHVITREELRE 363
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
+L I D+ERL+ + R A + ++ S LP I+S L +++G I+
Sbjct: 364 YLNPIYDLERLITRVTYRTANPRDLIAFKNSISMLPPIKSLLDEFDGALLKNIQ------ 417
Query: 430 LESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
D D + + +LV+ S+ + E G +I Y+ + +N + + +
Sbjct: 418 ----NDIDAMEELCSLVDRSIMEEPPISVREGG--LIKEGYNEDVDKYRNAKTEGKTWLA 471
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
L + + K LK+ FG+ +T + + T + +T + ++
Sbjct: 472 ELEAKEREKTGI---KNLKIKYNKVFGYYLEVTNSYKDLVPDYFTRK----QTLANAERY 524
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELV----NRVIQTAVTFSEIFKSLATMLSELDVLLS 601
+LK+L D ++ + + +L N++ + V K++A LDV +S
Sbjct: 525 ITPELKELEDMILGAEDKLVSLEYDLFCEVRNKIAEEVVRIQRTAKAIAN----LDVFVS 580
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQI 660
A +A Y RP + V DI +G RHP VE + FI ND L G + I
Sbjct: 581 LAVVADQ--NNYCRPKMTNSGVIDI--KGGRHPVVEKMITNDMFIDNDTYLDNGNNRIAI 636
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQ + +LMAQ+GSFVP A I + D IF RVGA D G STFM
Sbjct: 637 ITGPNMAGKSTYMRQAALIVLMAQIGSFVPATSAKIGIVDRIFTRVGASDDLASGQSTFM 696
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHF 778
EM E A+IL+ AT SL+++DE+GRGTST+DG +AWA+ EH+ + A TLFATH+
Sbjct: 697 VEMNEVANILRNATSNSLLVLDEIGRGTSTFDGLSIAWAVVEHISNPRLLGAKTLFATHY 756
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HELT L + N V NY ++ + + L K+ G D+S+GI VA+
Sbjct: 757 HELTELEGKLNN---------VHNYCIA--VKEKGDDIVFLRKIVQGGADKSYGIQVAKL 805
Query: 839 ANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR 879
A P+SV+ A+E EL ++V + G+K+K+
Sbjct: 806 AGVPDSVIERAKEIVEELSANDITSVTKNITPATAGTKKKK 846
>gi|336113900|ref|YP_004568667.1| DNA mismatch repair protein MutS [Bacillus coagulans 2-6]
gi|335367330|gb|AEH53281.1| DNA mismatch repair protein MutS [Bacillus coagulans 2-6]
Length = 858
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 200/583 (34%), Positives = 309/583 (53%), Gaps = 42/583 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ Y + ++ +D + R L + E+ K SL L++ T TA MG RLL W+ +PL
Sbjct: 239 VEMYEVRRFLNIDYYSKRNLELTETIRGQGKKGSLLWLLDETMTA-MGGRLLKQWIGRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
L +I ARL +V+ F++ R+D+R LK + D+ERL + + +++L S
Sbjct: 298 LKQEKIEARLQMVETFLNHYFEREDIRGRLKEVYDLERLAGRVAFGNVNARDLIQLKCSL 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
++P IR+ ++ E S + LDP E LTD L + I E S + E G M
Sbjct: 358 QQIPGIRAVMESMESPESKKLAA-LLDPCEELTD--LLERAI---EDSPPVSVKEGG--M 409
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK- 520
I Y+ L ++ ++ ++ I SL ++ + K+LK+ FG+ +TK
Sbjct: 410 IRDGYNEELDRYRDASKNGKQWIASLEREERERTGI---KSLKVGYNRVFGYYIEVTKAN 466
Query: 521 ----EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
EE + +K +T + +F +LK+ + E + + EL +
Sbjct: 467 LHLLEEGRYERK--------QTLANAERFITPELKEKEALILQAEERMIDLEYELFTEIR 518
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
F + LA +S +DVL SFA ++ YT+P V I EG RHP V
Sbjct: 519 AHVKEFIPRLQRLAKAVSTIDVLQSFAVVSEK--RHYTKPVFRTDGVLKIT-EG-RHPVV 574
Query: 637 E-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E D +++PNDC + + +ITGPNM GKST++RQ+ + +++AQ+G FVP A
Sbjct: 575 EKVLDSQSYVPNDCLMDENREIL-LITGPNMSGKSTYMRQIALTVILAQIGCFVPAREAE 633
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
+ V D IF R+GA D + G STFM EMLE + + AT+RSLI+ DE+GRGTSTYDG
Sbjct: 634 LPVFDRIFTRIGAADDLISGQSTFMVEMLEAKNAIANATERSLILFDEIGRGTSTYDGMA 693
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
LA A+ E++ +EI A TLF+TH+HELTAL+ + + + N HV+A + K
Sbjct: 694 LAQAMIEYIHDEIGAKTLFSTHYHELTALSAD---------LGKLQNVHVTAM--EQNGK 742
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
+ L+K++ G D+S+GIHVA+ A PE V+ A + LE+
Sbjct: 743 VVFLHKIKEGPADKSYGIHVAKLAGLPEQVIRRAEKILHALEN 785
>gi|291536168|emb|CBL09280.1| DNA mismatch repair protein MutS [Roseburia intestinalis M50/1]
Length = 853
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 323/641 (50%), Gaps = 52/641 (8%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNY-YIRKYSLDSYMRLDSAAMRALNVLESKTD 309
+S + A GALL Y + +++ GN I YS YM +DS+ R L ++E+ +
Sbjct: 246 LSDYACGTIAAGALLRYL-YETQKNDLGNLSAIHPYSTGKYMIIDSSTRRNLELVETLRE 304
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
K SL ++++T TA MG R L +++QPL+D EI R + + D R++LR+
Sbjct: 305 KQKRGSLLWVLDKTKTA-MGARTLRAYVEQPLIDKTEIELRQEAIGELNDHVITREELRE 363
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
+L I D+ERL+ + R A + ++ S LP I+S L +++G I+
Sbjct: 364 YLNPIYDLERLITRVTYRTANPRDLIAFKNSISMLPPIKSLLDEFDGALLKNIQ------ 417
Query: 430 LESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIH 485
D D + + +LV+ S+ + E G +I Y+ + +N + + +
Sbjct: 418 ----NDIDAMEELCSLVDRSIMEEPPISVREGG--LIKEGYNEDVDKYRNAKTEGKTWLA 471
Query: 486 SLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKF 545
L + + K LK+ FG+ +T + + T + +T + ++
Sbjct: 472 ELEAKEREKTGI---KNLKIKYNKVFGYYLEVTNSYKDLVPDYFTRK----QTLANAERY 524
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELV----NRVIQTAVTFSEIFKSLATMLSELDVLLS 601
+LK+L D ++ + + +L N++ + V K++A LDV +S
Sbjct: 525 ITPELKELEDMILGAEDKLVSLEYDLFCEVRNKIAEEVVRIQRTAKAIAN----LDVFVS 580
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQI 660
A +A Y RP + V DI +G RHP VE + FI ND L G + I
Sbjct: 581 LAVVADQ--NNYCRPKMTNSGVIDI--KGGRHPVVEKMITNDMFIDNDTYLDNGNNRIAI 636
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQ + +LMAQ+GSFVP A I + D IF RVGA D G STFM
Sbjct: 637 ITGPNMAGKSTYMRQAALIVLMAQIGSFVPATSAKIGIVDRIFTRVGASDDLASGQSTFM 696
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHF 778
EM E A+IL+ AT SL+++DE+GRGTST+DG +AWA+ EH+ + A TLFATH+
Sbjct: 697 VEMNEVANILRNATSNSLLVLDEIGRGTSTFDGLSIAWAVVEHISNPRLLGAKTLFATHY 756
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HELT L + N V NY ++ + + L K+ G D+S+GI VA+
Sbjct: 757 HELTELEGKLNN---------VHNYCIA--VKEKGDDIVFLRKIVQGGADKSYGIQVAKL 805
Query: 839 ANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR 879
A P+SV+ A+E EL ++V + G+K+K+
Sbjct: 806 AGVPDSVIERAKEIVEELSANDITSVTKNITPATAGTKKKK 846
>gi|417091961|ref|ZP_11956695.1| DNA mismatch repair protein MutS [Streptococcus suis R61]
gi|353532530|gb|EHC02199.1| DNA mismatch repair protein MutS [Streptococcus suis R61]
Length = 846
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 217/687 (31%), Positives = 353/687 (51%), Gaps = 79/687 (11%)
Query: 202 SSECKTLRDALTR---CGVMLTERKKTEFKTR-DLVQDLDRLVRGSVEPVRDLVSGFEIA 257
+S C +R+ R G L+E ++ F + +L+ + V V+ + + ++ E A
Sbjct: 159 TSLCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA 218
Query: 258 PGALGALLSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
A G LLSY + D S+ + Y + Y+++D A +L++LE+ K+ S
Sbjct: 219 --AAGKLLSYLHRTQMRDLSHLQK--VVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGS 274
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L+ L++ T TA MG RLL W+ +PL+D+ I +R +VQ F+D R DL + LK +
Sbjct: 275 LYWLLDETKTA-MGMRLLRAWIDRPLIDLKRIESRQAVVQVFLDYFFERSDLVEALKGVY 333
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLT 434
DIERL + + + +++L Q+ +P I++ LQQ + +SL+ LDP+ L
Sbjct: 334 DIERLASRVSFGKTMPKDLLQLSQTLGNVPAIKNILQQMDQPALTSLVAG--LDPIPELH 391
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALK----------NEQESLE 481
AL+ +++D D + +G +I + +D L + E E+ E
Sbjct: 392 ---------ALISSAIDPDAQGAITDGN-IIRTGFDETLDQYRLVMREGAGWIAEIEAKE 441
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
R+ ++ LK+D + G+ F +T + F T K+
Sbjct: 442 REASGINN-------------LKIDYNKKDGYYFHVTNSN----LDNVPDHFFRKATLKN 484
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
++ +L K+ Q + ++ N + E+ R+ Q + + LA ++ +DVL +
Sbjct: 485 SERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQA 544
Query: 602 FADLASS----CPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKS 656
FA +A CP +T D ++ ++ RH VE +IPN L +
Sbjct: 545 FAVVAEQQHLVCPR-FT-------DQRELTIDRGRHAVVEKVMGKQTYIPNSIHL-NTDT 595
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
Q+ITGPNM GKST++RQ+ V ++MAQ+GS+VP D+A + + D IF R+GA D + G
Sbjct: 596 HMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRIGAADDLVSGQ 655
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM+E ++ ATDRSLI+ DELGRGT+TYDG LA +I E++ ++I A TLFAT
Sbjct: 656 STFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHDKIGAKTLFAT 715
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L ++ + + N HVS ++T L+K+ G D+S+GIHVA
Sbjct: 716 HYHELTDL---------SQTLEHLENVHVSTL--EKDGQVTFLHKIAQGPADKSYGIHVA 764
Query: 837 EFANFPESVVTLAREKAAELEDFTPSA 863
+ A PE ++ A LE+ P+A
Sbjct: 765 KIAGMPEELLERADRILQTLENQAPTA 791
>gi|291522251|emb|CBK80544.1| DNA mismatch repair protein MutS [Coprococcus catus GD/7]
Length = 882
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 219/670 (32%), Positives = 334/670 (49%), Gaps = 63/670 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+GALL Y + I Y YM +DSA R L ++E+ + K SL +
Sbjct: 236 AVGALLLYLYETQKNTLDNLTKITPYRSGGYMIIDSATNRNLELIETLREKQKKGSLLWV 295
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG RL+ W++QPL++ +I AR D V+ +D R+++R++L + D+ER
Sbjct: 296 LDKTKTA-MGARLMRNWIEQPLIEKKKITARQDAVEELYNDMITREEIREYLNAVYDLER 354
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + R A + ++ S +P ++ L Q + I ER +D LE + D
Sbjct: 355 LVTRISYRTANPRDLIAFKTSLGMIPPVKQLLSQAKSAELKEIDER-MDCLEDIYD---- 409
Query: 440 NKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L+E S+ + E G MI Y+ + + + + + L +
Sbjct: 410 -----LIEKSIQDEPPIMIREGG--MIKEGYNEDVDKFRLSRTEGKTWLAELEAREKEKT 462
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K L++ FG+ +T + + + T + +T + ++ +LK+L D
Sbjct: 463 GI---KNLRVRYNKVFGYYLEVTNSYKELVPEDWTRK----QTLANAERYITPELKELED 515
Query: 556 QYQKVLEEYKNCQKELV----NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
++ + +L + + + V E K++A LDVL S A +A S
Sbjct: 516 MILGAEDKLAALEYDLYCEVRDSIGEQVVRIQETAKAIA----HLDVLASLACVAQS--N 569
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKS 670
Y RP IN V DI +G RHP VE + FI ND L IITGPNM GKS
Sbjct: 570 DYVRPSINTKGVIDI--QGGRHPVVEKMNNNQMFIDNDTYLDNKNHRISIITGPNMAGKS 627
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQ + +LMAQ+GSFVP A+I + D IF RVGA D G STFM EM E A+IL
Sbjct: 628 TYMRQSALIVLMAQIGSFVPAKSANIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANIL 687
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHEN 788
+ AT RSL+I+DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT L
Sbjct: 688 RNATSRSLLILDEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEG-- 745
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
++ V NY ++ + + L K+ G D+S+GI VA A P+SV+
Sbjct: 746 -------KLDSVNNYCIA--VREQGDDIIFLRKIIRGGADKSYGIQVARLAGVPDSVIDR 796
Query: 849 AREKAAELEDFTPSAVISDDAK---IEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPL 905
A+E A+ LE+ ++D AK + +K+K + R A A + + F P
Sbjct: 797 AKEIASWLEETD----VTDKAKNLQVRTSAKKKEV------VREAVPAEKQMSLFDIYPA 846
Query: 906 ETMDLKEALE 915
+ LKE E
Sbjct: 847 DHPVLKELAE 856
>gi|229829057|ref|ZP_04455126.1| hypothetical protein GCWU000342_01142 [Shuttleworthia satelles DSM
14600]
gi|229792220|gb|EEP28334.1| hypothetical protein GCWU000342_01142 [Shuttleworthia satelles DSM
14600]
Length = 895
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 221/687 (32%), Positives = 346/687 (50%), Gaps = 52/687 (7%)
Query: 254 FEIAPGALGALLSYAELLSDESNYGNY-YIRKYSLDSYMRLDSAAMRALNVLESKTDANK 312
F I A GALL Y + + +S+ N I Y +YM LD+A R L ++E+ + K
Sbjct: 243 FPIGSIAAGALLKYL-IETQKSDLANMSAISPYRGGNYMLLDAATRRNLELVETLREKEK 301
Query: 313 NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLK 372
SL ++++T TA MG R+L ++QPL+D EI R D + + D R+++R++L
Sbjct: 302 RGSLLWVLDKTRTA-MGARMLRSRIEQPLIDEEEIINRYDALDEMLSDMISREEIREYLN 360
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLES 432
+ D+ERL+ + + A + +V S LP IR+ L FSS +R LD ++
Sbjct: 361 PVYDLERLITRITYQTANPRDLVAFASSVAVLPAIRALL----ADFSSRNMKRILDDMDP 416
Query: 433 LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
L D L + + + E G +I + Y+ + L+ ++ + L +
Sbjct: 417 LEDIKTL--ISSAIAEEPPISSHEGG--IIRAGYNQEIDRLRAAATDGKQWLAELETRER 472
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+ K L++ FG+ +T + FI +T + +F +LK+
Sbjct: 473 EKTGI---KNLRIKYNRVFGYYLEVTNS----YLNLVPDYFIRKQTLTNAERFYTPELKE 525
Query: 553 LGDQYQKVLEEYKNCQKELV----NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASS 608
L + + + EL +RV Q V + +++A+ LD S A +A
Sbjct: 526 LENTILGSADRLLALENELFCQVRDRVGQEVVRIQKTARAIAS----LDFYQSLAKVAED 581
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNM 666
+ RP +N + +I + RHP VE +D +FI ND L IITGPNM
Sbjct: 582 --NRFCRPRLNKRGILEI--KNGRHPVVEKMLRDG-DFIANDTYLDNKSHRLSIITGPNM 636
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST++RQ + +LMAQVGSFVP + A+ISV D IF RVGA D G STFM EM E
Sbjct: 637 AGKSTYMRQNAIIVLMAQVGSFVPAEAANISVVDRIFTRVGASDDLASGQSTFMVEMSEV 696
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTAL 784
A+IL+ AT +SL+I+DE+GRGTST+DG +AWA+ E++ I A TLFATH+HELT L
Sbjct: 697 ANILRNATSKSLLILDEIGRGTSTFDGLSIAWAMVEYIANSRLIGAKTLFATHYHELTEL 756
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
++ GV NY V+ + ++ L K+ PG D+S+GI VA+ A P+
Sbjct: 757 ---------EGRIDGVNNYCVA--VKEKGDEIVFLRKIVPGGADRSYGIQVAKLAGVPDG 805
Query: 845 VVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRG------AARAHQFLK 898
V+ A+E + EL D + + ++ RK S +++ G + ++
Sbjct: 806 VIERAKEISEELSDHDITLIAANILPEAKRGARKPPSSLDEVDMGQMSLFDTIKDDDIIR 865
Query: 899 EFSDMPLETMDLKEALERVKRMKDDLE 925
E DM + + EAL R+ M++ ++
Sbjct: 866 ELRDMDISNLTPLEALNRLNEMQNKVK 892
>gi|168218088|ref|ZP_02643713.1| DNA mismatch repair protein MutS [Clostridium perfringens NCTC
8239]
gi|182379897|gb|EDT77376.1| DNA mismatch repair protein MutS [Clostridium perfringens NCTC
8239]
Length = 910
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 316/582 (54%), Gaps = 39/582 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ + E SSL+ + Y + D L L+E S+ D L++G
Sbjct: 371 GKIPNVKGII---ENCTSSLLNDYY-------NNLDDLRDIYELLEKSIKEDPSLTLKDG 420
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ +I +++ + L+ + + + I SL + + + K+LK+ FG+ I+
Sbjct: 421 D-LIKDGFNSEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIEIS 476
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 477 KANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNE 533
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP VE
Sbjct: 534 VENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVVEK 589
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+IS
Sbjct: 590 VIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANIS 649
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
V D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG +A
Sbjct: 650 VVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIA 709
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
W++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 710 WSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVDNN 758
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E LE
Sbjct: 759 IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILETLE 800
>gi|170076810|ref|YP_001733448.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7002]
gi|169884479|gb|ACA98192.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7002]
Length = 881
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 199/613 (32%), Positives = 314/613 (51%), Gaps = 35/613 (5%)
Query: 256 IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
+A A G LL+Y E ++ YS+D++++LD R L + ++ D + S
Sbjct: 270 LAVRAAGGLLAYVEETQQAYKVPFESLKTYSIDAFLQLDHQTRRNLEITQTVRDGSFYGS 329
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L ++ TCT MG R L WL QPLLD I RLD V V++T LRQD+RQ LK+I
Sbjct: 330 LLWALDVTCT-NMGGRALRRWLLQPLLDPKAIAKRLDSVAELVENTNLRQDIRQLLKQIY 388
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD 435
D+ER+ + A + + L +S +L Y+ + + +K+ + LE+L
Sbjct: 389 DLERIAGRIGSGSANARDLYALAESLTKLTYLAELATEGRSPYLQAVKD-FPPELEAL-- 445
Query: 436 DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
H+ +++ S + E G +I D L L+ Q + +L ++
Sbjct: 446 GQHVLQYLV---DSPPIHIKEGG--LIRDGVDENLDFLRRSQVEDREWLANLE---VTER 497
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ LK+ FG+ + + + K +++ +T + ++ +LK+
Sbjct: 498 ERTGVSKLKVGYNKTFGYYISLPRSQA----DKAPDEYLRKQTLANEERYITPELKERES 553
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
+ ++ + + E+ + ++ ++ A ++ LDVL SFA+ A Y R
Sbjct: 554 RILTAKDDICSLEYEIFTTLRAEVAEHTDQIRTTAKAIAALDVLTSFAETAVY--QGYCR 611
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQ---IITGPNMGGKST 671
P+I +I E RHP VE + F+PN L R ++ + I+TGPN GKS
Sbjct: 612 PEITTEKTLEI--EAGRHPVVEKSLGMGLFVPNSTYLGRTQNSYPDLIILTGPNASGKSC 669
Query: 672 FIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILK 731
++RQ G+ LMAQVGSFVP A I + D IF RVGA D G STFM EM ETA+IL
Sbjct: 670 YLRQTGLIQLMAQVGSFVPAQSAVIPICDRIFTRVGAVDDLATGQSTFMVEMNETANILN 729
Query: 732 GATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANE 791
AT++SL++IDE+GRGT+T+DG +AW++ E+L EI+A T+FATH+HEL LA N
Sbjct: 730 HATEKSLVLIDEIGRGTATFDGLSIAWSVSEYLATEIKAKTIFATHYHELNELASLLEN- 788
Query: 792 FNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
VANY V+ + ++ L++V PG D+S+GI A P+SV+ A++
Sbjct: 789 --------VANYQVT--VQEMPEEIIFLHQVRPGGADRSYGIEAGRLAGLPKSVIQRAKQ 838
Query: 852 KAAELEDFTPSAV 864
++E + AV
Sbjct: 839 VMTQIEKHSKIAV 851
>gi|228992457|ref|ZP_04152385.1| DNA mismatch repair protein mutS [Bacillus pseudomycoides DSM
12442]
gi|228767278|gb|EEM15913.1| DNA mismatch repair protein mutS [Bacillus pseudomycoides DSM
12442]
Length = 906
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 202/607 (33%), Positives = 333/607 (54%), Gaps = 48/607 (7%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+G LL+Y S + Y + +M++D + R L + E+ K SL L
Sbjct: 239 AVGRLLNYVLRTQKRSLDHLQPVDIYYTNQFMKIDVHSKRNLELTETLRTKEKTGSLLWL 298
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L W+++PL+ + I RL++V+ FV+D LR+DL++ LK + D+ER
Sbjct: 299 LDKTKTA-MGGRMLKQWMERPLIQKDNIEERLEMVETFVNDYFLREDLKEKLKEVYDLER 357
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + + +++L +S +++P I A+ + +++ + + DP ESLT+
Sbjct: 358 LAGKVAYGNVNARDLLQLRRSLLQVPAILEAISLLDNSYAARLIQG-ADPCESLTE---- 412
Query: 440 NKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
L+ S+ + +++G+ +I Y+ L + ++ + I L K+ + D
Sbjct: 413 -----LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELEKR---ERD 463
Query: 497 LPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+ K+LK+ FG+ +TK E + +K +T + +F +LK
Sbjct: 464 ITGIKSLKIGYNRIFGYYIEVTKANLSALPEGRYERK--------QTLANAERFVTDELK 515
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
+ + E+ + +L + + F + LA ++SELDVL SFA ++
Sbjct: 516 EKETLILEAEEKIVQLEYDLFTVLREEVKVFIPKLQHLAKVISELDVLQSFATVSEE--E 573
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
+ +P + D +I ++ RHP VE + ++PNDC + F +ITGPNM GKS
Sbjct: 574 QFVKPVLT--DKREIFIKDGRHPVVEKVLNGKLYVPNDCMMPENMDVF-LITGPNMSGKS 630
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM EMLE + +
Sbjct: 631 TYMRQLALITVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAI 690
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT L
Sbjct: 691 ANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVL------ 744
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
E + +Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P+S++ A+
Sbjct: 745 EESLEQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAK 799
Query: 851 EKAAELE 857
E A+LE
Sbjct: 800 EVLAQLE 806
>gi|332799274|ref|YP_004460773.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
gi|332697009|gb|AEE91466.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
Length = 869
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 354/715 (49%), Gaps = 50/715 (6%)
Query: 150 ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTE-AVKSSECKTL 208
+N GL +VDL + + + + + +ECL E + + S + L
Sbjct: 128 KNKHEFGLAFVDLMTGEFDITNLKSSYPYHEIINEVSRFSPRECLANHELSQEKSLNRKL 187
Query: 209 RDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYA 268
++ L C T R T F + + L + + E ++ L + A A GA L Y
Sbjct: 188 KENLKLC---FTFRDATYFDEQSALILL--MSQFGEEKIKKL-ENRKPALIAAGACLRY- 240
Query: 269 ELLSDESNYGNYYIRKYSL---DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCT 325
L++ +I S +M LD + L + E+ D K SL +M++T T
Sbjct: 241 --LNETQKLNLSHINSISFYENHDFMVLDFICSKNLEITENLRDRKKTGSLLWVMDKTST 298
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLE 385
A MG RLL WL+QPLLD+ +I R D ++ +D LR DL++ LK I DIERL L
Sbjct: 299 A-MGARLLRKWLEQPLLDILKIKQRQDAIEELFNDFFLRSDLKEQLKNIYDIERLSGKLV 357
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIAL 445
A + ++ + + LP I+ L + + I E+ LDPLE + L
Sbjct: 358 CGNANARDLLAIKNTIKSLPQIKHILTRCNSKLLHQIYEQ-LDPLEDIC---------LL 407
Query: 446 VETSV--DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKAL 503
+E S+ D +I Y++ + L+ + I L ++ + K+L
Sbjct: 408 LEKSIFEDPPLTIKEANVIKDGYNSEIDMLRKASREGKAWIADLERKERESTGI---KSL 464
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
K+ FG+ +TK + + +I +T + ++ +LK+ E+
Sbjct: 465 KIGFNKVFGYYIEVTKSNLSMVPE----NYIRKQTLANAERYITEELKEYESLILNANEK 520
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
+ + L + + K A LS LDVLLS A+++ S Y +P++N D
Sbjct: 521 LQELEYNLFCEIRDQLIKEIPRLKQSAYNLSLLDVLLSLAEVSYS--NNYIKPEVNLSDE 578
Query: 624 GDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
+II RHP VE Q FIPND ++ + +ITGPNM GKST++RQV + +LM
Sbjct: 579 INII--DGRHPVVELTQKEELFIPNDTQIDCSDNLISVITGPNMAGKSTYMRQVALIVLM 636
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQ+G F+P +A I + D IF R+GA D G STFM EM E A IL AT++SL+I+D
Sbjct: 637 AQIGCFIPAKKAKIGIVDRIFTRIGASDNLALGQSTFMVEMTEVADILNNATNKSLLILD 696
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
E+GRGTST+DG +AWA+ E++ + ++A TLFATH+HELTAL K++ GV N
Sbjct: 697 EVGRGTSTFDGLSIAWAVIEYIQKNLKAKTLFATHYHELTAL----------KKLKGVKN 746
Query: 803 YHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
Y ++ + + L K+ PG D+S+GI VA+ A P +V+ AR+ +LE
Sbjct: 747 YKIT--VKEKGDDVIFLRKIVPGEADKSYGIQVAKLAGVPNAVINRARKILVDLE 799
>gi|339443299|ref|YP_004709304.1| hypothetical protein CXIVA_22350 [Clostridium sp. SY8519]
gi|338902700|dbj|BAK48202.1| hypothetical protein CXIVA_22350 [Clostridium sp. SY8519]
Length = 888
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 202/605 (33%), Positives = 303/605 (50%), Gaps = 42/605 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A G+LL Y I YS YM +DS+ R L + E+ + NK SL +
Sbjct: 243 AAGSLLKYLYETQKNGMTQLTKIEPYSTGRYMVIDSSTRRNLELTETLREKNKRGSLLWV 302
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R L +++QPL+D EIN RLD V+ + R++LR++L I D+ER
Sbjct: 303 LDKTKTA-MGARTLRSYIEQPLIDRKEINQRLDAVEELKKNMIGREELREYLNPIYDLER 361
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + + A + ++ S LP IR L+ + + I +R D L
Sbjct: 362 LISRIVYQNANPRDLIAFRNSIAMLPPIREILKDFSCELLQQINQRM----------DDL 411
Query: 440 NKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
+ +L++ S+ D E G +I Y L++ + + + ++
Sbjct: 412 SDLFSLIQASITEDPPVSVREAG--IIREGYSEEADRLRSARSDGRSWLARIEQEEKEKT 469
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ + L++ FG+ +T R + FI +T + ++ +LK+L +
Sbjct: 470 GI---RNLRIKYNKVFGYYLEVTNS----YRDLVPDYFIRKQTLTNAERYITPELKELEE 522
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
++ + +L + + A ++ELDV +S A +A S Y R
Sbjct: 523 TILGASDKLNALEYDLFCEIRSKIAGQVVRIQQTARAVAELDVFVSLAQVADS--NGYVR 580
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
P IN + G I + RHP VE + FIPND L + IITGPNM GKST++R
Sbjct: 581 PKIN--EKGSIRITEGRHPVVERMIRNDMFIPNDMTLDNHSNRIAIITGPNMAGKSTYMR 638
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q + +LMAQ+GSFVP ASI + D IF RVGA D G STFM EM E A+IL+ AT
Sbjct: 639 QNALIVLMAQIGSFVPAKSASIGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNAT 698
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEF 792
SL+I+DE+GRGTST DG G+AWA+ E++ + A TLFATH+HELT L
Sbjct: 699 ASSLLILDEIGRGTSTIDGLGIAWAVVEYISNPKLLGAKTLFATHYHELTELEG------ 752
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
++ V NY V+ + + L K+ PG D+S+GI VA+ A P+ V+ A+E
Sbjct: 753 ---KLDAVHNYCVA--VREKGDDIVFLRKIVPGGTDRSYGIQVAKIAGVPDPVIRRAKEI 807
Query: 853 AAELE 857
ELE
Sbjct: 808 CEELE 812
>gi|404482176|ref|ZP_11017403.1| DNA mismatch repair protein MutS [Clostridiales bacterium OBRC5-5]
gi|404344337|gb|EJZ70694.1| DNA mismatch repair protein MutS [Clostridiales bacterium OBRC5-5]
Length = 882
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 228/738 (30%), Positives = 374/738 (50%), Gaps = 60/738 (8%)
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDR-LVRGSVEPVRDLVSGFEIAPGALGALL 265
+L + + + +T T F ++ + L R S+E + +S F A + GA+L
Sbjct: 183 SLEELKKKYNITITSLDNTYFSEKNSLDILKRHFAVSSIEALG--LSEFSDATISSGAML 240
Query: 266 SYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCT 325
Y + S I Y YM +D+++ R L ++E+ + KN SL G++++T T
Sbjct: 241 RYLYEMQKSSCAQIVGISAYKNGDYMIVDTSSRRNLELVETMREKKKNGSLLGVLDKTNT 300
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLE 385
A MG R+L +L+QPL++ I R + V D R++LR++L I D+ERLM +
Sbjct: 301 A-MGARMLRGFLEQPLVNKERIINRQEAVAELFDRYIDREELREYLNPIYDLERLMSRVV 359
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIAL 445
+ A + ++ L S + I+ L+ +E S IK+ + + D L+ I +
Sbjct: 360 TKNANTRDLLSLSASMKMISPIKDVLKTFE---SGEIKK-------TNNNLDRLHDIIDI 409
Query: 446 VETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
++ +++ D L+ G +I++ Y++ + L+ + + + SL + + K
Sbjct: 410 IDRAINEDSPLSLKEGN-IINTGYNSEIDKLRQAKTEGKNWLASLESEEKEKTGI---KN 465
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
LK+ FG+ F +T + + FI +T + ++T KLK L + +
Sbjct: 466 LKVKFNKVFGYYFEVTNS----FKDMVPDYFIRKQTLTNAERYTTDKLKDLENIILGAED 521
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
+ + + E+ + +S A ++ +D L S A +A + Y +P+IN
Sbjct: 522 KLNSLEYEVFVEIRDEIAKNVNRIQSSAKAVAYIDALCSLATVAYN--NNYVKPEINTTG 579
Query: 623 VGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
V DI RHP VE + +FI ND L + K IITGPNM GKST++RQ + +
Sbjct: 580 VIDI--RDGRHPVVETMLNDDSFIANDTYLDQNKKRMSIITGPNMAGKSTYMRQTALICM 637
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+GSFVP +A++ V D IF RVGA D G STFM EM E A+IL+ AT SL+I+
Sbjct: 638 MAQIGSFVPAKQANLCVCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRNSLVIL 697
Query: 742 DELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
DE+GRGTST+DG +AWA+ EH+ ++ I A TLFATH+HEL+ L + G
Sbjct: 698 DEIGRGTSTFDGLAIAWAVVEHISNIKLIGAKTLFATHYHELSELEG---------TLPG 748
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
V NY +S + + L K+ G D+S+GI VA+ A P+SV A+E EL
Sbjct: 749 VNNYCIS--VKENGDNIVFLRKIITGGADKSYGIQVAKLAGVPDSVTNRAKELIEEL--- 803
Query: 860 TPSAVISDDAKIEVG------SKRKRISDPNDMSRG------AARAHQFLKEFSDMPLET 907
SA I+ A+ E+ SKRK + +++ G A +KE S++ + +
Sbjct: 804 -SSADIATRAR-EIAEATPAVSKRKPVKKMSEVEAGQLSLFDAINNDTIIKEISEIDITS 861
Query: 908 MDLKEALERVKRMKDDLE 925
M +AL + +++ ++
Sbjct: 862 MTPMDALNTLYALQNKIK 879
>gi|88798289|ref|ZP_01113875.1| DNA mismatch repair protein [Reinekea blandensis MED297]
gi|88779065|gb|EAR10254.1| DNA mismatch repair protein [Reinekea sp. MED297]
Length = 862
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 234/706 (33%), Positives = 340/706 (48%), Gaps = 97/706 (13%)
Query: 251 VSGFEI-----APGALGALLSYA-ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVL 304
+SGF + A A G LL+YA E E + N + + DS + LDSA R L +
Sbjct: 222 LSGFGVETLTEALRAAGCLLNYARETQRGELPHVNAIAPELTSDSVI-LDSATRRNLEI- 279
Query: 305 ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALR 364
+ ++ +LF LM+ C+ MG R L WL +PL D +++ R V +DD
Sbjct: 280 DINVRGEESHTLFALMDH-CSTAMGSRRLRRWLNRPLRDQDQLRQRQAAVAILLDDFRFE 338
Query: 365 QDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRS--------ALQQYEG 416
Q +QHLK I DIER++ + R A + +++L ++ ++S LQ
Sbjct: 339 Q-FQQHLKPIGDIERVLARVALRSARPRDLIRLREALAAQTDLQSLLETCDNNVLQTLRS 397
Query: 417 QFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKN- 475
Q + + ++LD L S D N + + E V I+ YD L L+
Sbjct: 398 QLN--VDPKWLDELRSAIRD---NPPVVIREGGV-----------IAEGYDHELDELRGL 441
Query: 476 ---------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
E E+ ER L +LK+ G+ I+K +
Sbjct: 442 DSNAADFLAEMETTERNRTGL-------------SSLKVGYNRVHGYYIEISKAQAADAP 488
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
+ T + +T K+ +F +LK D+ +K L + ++Q
Sbjct: 489 VEYTRR----QTLKNAERFITPELKTFEDKALSARSRALAREKHLYDELVQKLAENLPGL 544
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD---IILEGSRHPCVEAQDWVN 643
+ L ELDVL++ A A R D N P++ + +EG RHP VEA +
Sbjct: 545 QQFCEGLIELDVLVNLAHCAD-------RFDWNQPELTHQNILTIEGGRHPVVEALNDTP 597
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
F+PN +L QIITGPNMGGKST++RQV + L+ +GSFVP DRA I D IF
Sbjct: 598 FVPNSTQL-SSDCRMQIITGPNMGGKSTYMRQVALIALLGCIGSFVPADRAVIGPLDRIF 656
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
R+G+ D G STFM EM ETA+IL AT SL+I+DE+GRGTST+DG LAWA E
Sbjct: 657 TRMGSSDDIAGGRSTFMVEMTETANILHNATPNSLVIMDEVGRGTSTFDGLSLAWASAEQ 716
Query: 764 LVEEIRAPTLFATHFHELTALAH-ENANEFNTKQMVGVANYHVSA--HIDSTSRKLTMLY 820
LV +++A TLFATH+ E+T L ENA V N H+ A H D +L L+
Sbjct: 717 LVSQVQALTLFATHYFEMTTLGETENA----------VQNVHLDATEHDD----RLVFLH 762
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRI 880
+V+ G QS+GI VA+ A PE+V+T AR++ AELE PSA ++ R +
Sbjct: 763 RVQEGPASQSYGIQVAKLAGVPETVITRARQRLAELE-AQPSA-----PTVKPEPSRTAV 816
Query: 881 SD--PNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
D P A H + E + L+ + ++ALE + R ++ L
Sbjct: 817 VDSAPAQADLFATAQHPIIDELEQLDLDNLTPRQALEWLYRNRERL 862
>gi|408402568|ref|YP_006860532.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417928022|ref|ZP_12571410.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765896|gb|EGR88422.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407968797|dbj|BAM62035.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 851
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 227/740 (30%), Positives = 363/740 (49%), Gaps = 84/740 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ + F +D L + D D L + L+ T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILESFNSPF--------VDKL--VNDIDSLPELEYLIRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLV----PDHFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--IKIQEGRHAVVEKVMGVQEYIPNSISFNQETS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT E +TK
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTMFATHYHELT--------ELSTK- 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A PE++++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPEALLSRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGS 875
E SA +IS +K+E S
Sbjct: 785 EAQAQSAEIISVPSKVEPSS 804
>gi|229000593|ref|ZP_04160133.1| DNA mismatch repair protein mutS [Bacillus mycoides Rock3-17]
gi|229006015|ref|ZP_04163704.1| DNA mismatch repair protein mutS [Bacillus mycoides Rock1-4]
gi|228755214|gb|EEM04570.1| DNA mismatch repair protein mutS [Bacillus mycoides Rock1-4]
gi|228759148|gb|EEM08154.1| DNA mismatch repair protein mutS [Bacillus mycoides Rock3-17]
Length = 906
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 200/607 (32%), Positives = 331/607 (54%), Gaps = 48/607 (7%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+G LL+Y S + Y + +M++D + R L + E+ K SL L
Sbjct: 239 AVGRLLNYVLRTQKRSLDHLQPVDIYYTNQFMKIDVHSKRNLELTETLRTKEKTGSLLWL 298
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L W+++PL+ + I RL++V+ FV+D LR+DL++ LK + D+ER
Sbjct: 299 LDKTKTA-MGGRMLKQWMERPLIQKDNIEERLEMVETFVNDYFLREDLKEKLKEVYDLER 357
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + + +++L +S +++P I A+ + +++ + + DP ESLT+
Sbjct: 358 LAGKVAYGNVNARDLLQLRRSLLQVPAILEAISLLDNSYAARLIQG-ADPCESLTE---- 412
Query: 440 NKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
L+ S+ + +++G+ +I Y+ L + ++ + I L K+ + D
Sbjct: 413 -----LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELEKR---ERD 463
Query: 497 LPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+ K+LK+ FG+ +TK E + +K +T + +F +LK
Sbjct: 464 ITGIKSLKIGYNRIFGYYIEVTKANLSALPEGRYERK--------QTLANAERFVTDELK 515
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
+ + E+ + +L + + F + LA ++SELDVL SFA ++
Sbjct: 516 EKETLILEAEEKIVQLEYDLFTVLREEVKVFIPKLQHLAKVISELDVLQSFATVSEE--E 573
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKS 670
+ +P + D +I ++ RHP VE + ++PNDC + F +ITGPNM GKS
Sbjct: 574 QFVKPVLT--DKREIFIKDGRHPVVEKVLNGKLYVPNDCMMPENMDVF-LITGPNMSGKS 630
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM EMLE + +
Sbjct: 631 TYMRQLALITVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAI 690
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENAN 790
A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT L
Sbjct: 691 ANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLE----- 745
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ + + N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P+S++ A+
Sbjct: 746 ----ESLERLKNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAK 799
Query: 851 EKAAELE 857
E A+LE
Sbjct: 800 EVLAQLE 806
>gi|251783479|ref|YP_002997784.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242392111|dbj|BAH82570.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 851
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 225/740 (30%), Positives = 362/740 (48%), Gaps = 84/740 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ + Y+D L + D D L + L+ T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILESFNSA--------YVDKL--VNDIDSLPELEYLIRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLV----PDHFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--IKIQEGRHAVVEKVMGVQEYIPNSISFNQETS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTMFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A PE++++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPEALLSRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGS 875
E SA +IS +K+E S
Sbjct: 785 EAQAQSAEIISVPSKVEPSS 804
>gi|168214981|ref|ZP_02640606.1| DNA mismatch repair protein MutS [Clostridium perfringens CPE str.
F4969]
gi|170713592|gb|EDT25774.1| DNA mismatch repair protein MutS [Clostridium perfringens CPE str.
F4969]
Length = 909
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 318/582 (54%), Gaps = 39/582 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ + E SSL+K Y L+ L D L+E S+ D L++G
Sbjct: 371 GKIPNVKGII---ENCTSSLLK-NYHHNLDDLRD------IYELLEKSIKEDPSLTLKDG 420
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ +I +++ + L+ + + + I SL + + + K+LK+ FG+ I+
Sbjct: 421 D-LIKDGFNSEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIEIS 476
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 477 KANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNE 533
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP VE
Sbjct: 534 VENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVVEK 589
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+IS
Sbjct: 590 VIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVSIITLMCQIGSFVPASKANIS 649
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
V D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG +A
Sbjct: 650 VVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIA 709
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
W++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 710 WSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVDNN 758
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E +LE
Sbjct: 759 IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILEKLE 800
>gi|386317938|ref|YP_006014102.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323128225|gb|ADX25522.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 851
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 225/740 (30%), Positives = 362/740 (48%), Gaps = 84/740 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALIHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ + Y+D L + D D L + L+ T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILESFNSA--------YVDKL--VNDIDSLPELEYLIRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLV----PDHFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--IKIQEGRHAVVEKVMGVQEYIPNSISFNQETS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTMFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A PE++++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPEALLSRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGS 875
E SA +IS +K+E S
Sbjct: 785 EAQAQSAEIISVPSKVEPSS 804
>gi|317504405|ref|ZP_07962387.1| DNA mismatch repair protein MutS [Prevotella salivae DSM 15606]
gi|315664477|gb|EFV04162.1| DNA mismatch repair protein MutS [Prevotella salivae DSM 15606]
Length = 886
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 303/602 (50%), Gaps = 37/602 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA+L Y EL + + D Y+RLD +R+L ++ + SL +
Sbjct: 248 AGGAILQYLELTQHTQINHITSLSRIEEDKYVRLDRFTIRSLELIAPMQEDGS--SLLNV 305
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT TA MG R+L WL PL DV I RLDIV F + RQ + + L R+ D+ER
Sbjct: 306 IDRTVTA-MGGRMLRRWLVFPLKDVAPIKERLDIVDYFFQKPSFRQLVDEQLHRVGDLER 364
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
++ + R ++IV+L + + I+ A E + + E+ L+ ES+ +
Sbjct: 365 IVSKVAVGRVSPREIVQLKNALDAVRPIKEACLYSENEALKRVGEQ-LNLCESIKT--RI 421
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
K E D QL +I+ Y+ L L+ + + + + + + A +
Sbjct: 422 EK-----EIQPDPPQLVAKGDVIADGYNKELDELRTMRRNGKDYLLKIQEDEAEATGI-- 474
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+LK+ FG+ + + K+ +I +T ++ +LK+ ++
Sbjct: 475 -LSLKVGFNNVFGYYLEVRNT----FKNKVPETWIRKQTLAQAERYITPELKEYEEKILG 529
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
E+ + L N ++ F + AT+L+ +D LLSFA ++ Y RP I+
Sbjct: 530 ADEKIMALEARLFNELVLAMQDFIPQIQINATLLARVDCLLSFAKISEE--NTYIRPQID 587
Query: 620 PPDVGDIILEGSRHPCVEAQDWV--NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
DV DI RHP +E Q + +++PND L K +ITGPNM GKS +RQ
Sbjct: 588 DSDVLDI--RQGRHPVIETQLPIGEHYVPNDVYLDTQKQQVMMITGPNMAGKSALLRQTA 645
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ +L+AQVG FVP +RASI + D IF RVGA D G STFM EM E A+IL + RS
Sbjct: 646 LIVLLAQVGCFVPAERASIGLVDKIFTRVGASDNLSLGESTFMVEMTEAANILNNVSPRS 705
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTK 795
L++ DELGRGTSTYDG +AWAI E+L E+ RA TLFATH+HEL + K
Sbjct: 706 LVLFDELGRGTSTYDGISIAWAIVEYLHEQAKARARTLFATHYHELNEM---------EK 756
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
V + NY+VS + K+ L K+ G + SFGIHVAE A P S+V A E
Sbjct: 757 NFVRIKNYNVS--VKEVDGKVIFLRKLMRGGSEHSFGIHVAEIAGMPRSIVKRANTILKE 814
Query: 856 LE 857
LE
Sbjct: 815 LE 816
>gi|438002405|ref|YP_007272148.1| DNA mismatch repair protein MutS [Tepidanaerobacter acetatoxydans
Re1]
gi|432179199|emb|CCP26172.1| DNA mismatch repair protein MutS [Tepidanaerobacter acetatoxydans
Re1]
Length = 843
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 237/752 (31%), Positives = 366/752 (48%), Gaps = 59/752 (7%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEF 172
+VK TPG + + E + +F N E GL +VDL +
Sbjct: 70 VVKIVTPGTITDLNAL-----EENKNNYLGCVFKNKHE----FGLAFVDLMTGEFDITNL 120
Query: 173 LDDSHFTNVESALVALGCKECLLPTE-AVKSSECKTLRDALTRCGVMLTERKKTEFKTRD 231
+ + + + +ECL E + + S + L++ L C T R T F +
Sbjct: 121 KSSYPYHEIINEVSRFSPRECLANHELSQEKSLNRKLKENLKLC---FTFRDATYFDEQS 177
Query: 232 LVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSL---D 288
+ L + + E ++ L + A A GA L Y L++ +I S
Sbjct: 178 ALILL--MSQFGEEKIKKL-ENRKPALIAAGACLRY---LNETQKLNLSHINSISFYENH 231
Query: 289 SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEIN 348
+M LD + L + E+ D K SL +M++T TA MG RLL WL+QPLLD+ +I
Sbjct: 232 DFMVLDFICSKNLEITENLRDRKKTGSLLWVMDKTSTA-MGARLLRKWLEQPLLDILKIK 290
Query: 349 ARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIR 408
R D ++ +D LR DL++ LK I DIERL L A + ++ + + LP I+
Sbjct: 291 QRQDAIEELFNDFFLRSDLKEQLKNIYDIERLSGKLVCGNANARDLLAIKNTIKSLPQIK 350
Query: 409 SALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV--DLDQLENGEYMISSSY 466
L + + I E+ LDPLE + L+E S+ D +I Y
Sbjct: 351 HILTRCNSKLLHQIYEQ-LDPLEDIC---------LLLEKSIFEDPPLTIKEANVIKDGY 400
Query: 467 DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIR 526
++ + L+ + I L ++ + K+LK+ FG+ +TK +
Sbjct: 401 NSEIDMLRKASREGKAWIADLERKERESTGI---KSLKIGFNKVFGYYIEVTKSNLSMVP 457
Query: 527 KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIF 586
+ +I +T + ++ +LK+ E+ + + L + +
Sbjct: 458 E----NYIRKQTLANAERYITEELKEYESLILNANEKLQELEYNLFCEIRDQLIKEIPRL 513
Query: 587 KSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFI 645
K A LS LDVLLS A+++ S Y +P++N D +II RHP VE Q FI
Sbjct: 514 KQSAYNLSLLDVLLSLAEVSYS--NNYIKPEVNLSDEINII--DGRHPVVELTQKEELFI 569
Query: 646 PNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
PND ++ + +ITGPNM GKST++RQV + +LMAQ+G F+P +A I + D IF R
Sbjct: 570 PNDTQIDCSDNLISVITGPNMAGKSTYMRQVALIVLMAQIGCFIPAKKAKIGIVDRIFTR 629
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
+GA D G STFM EM E A IL AT++SL+I+DE+GRGTST+DG +AWA+ E++
Sbjct: 630 IGASDNLALGQSTFMVEMTEVADILNNATNKSLLILDEVGRGTSTFDGLSIAWAVIEYIQ 689
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
+ ++A TLFATH+HELTAL K++ GV NY ++ + + L K+ PG
Sbjct: 690 KNLKAKTLFATHYHELTAL----------KKLKGVKNYKIT--VKEKGDDVIFLRKIVPG 737
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
D+S+GI VA+ A P +V+ AR+ +LE
Sbjct: 738 EADKSYGIQVAKLAGVPNAVINRARKILVDLE 769
>gi|228954046|ref|ZP_04116075.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229071266|ref|ZP_04204490.1| DNA mismatch repair protein mutS [Bacillus cereus F65185]
gi|229180046|ref|ZP_04307390.1| DNA mismatch repair protein mutS [Bacillus cereus 172560W]
gi|228603255|gb|EEK60732.1| DNA mismatch repair protein mutS [Bacillus cereus 172560W]
gi|228711887|gb|EEL63838.1| DNA mismatch repair protein mutS [Bacillus cereus F65185]
gi|228805612|gb|EEM52202.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 884
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ N+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLNQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|434391871|ref|YP_007126818.1| DNA mismatch repair protein MutS [Gloeocapsa sp. PCC 7428]
gi|428263712|gb|AFZ29658.1| DNA mismatch repair protein MutS [Gloeocapsa sp. PCC 7428]
Length = 852
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 224/731 (30%), Positives = 354/731 (48%), Gaps = 61/731 (8%)
Query: 152 GCTIGLGYVDLTKRVLGLAEFL--DDSHFTNVESALVALGCKECLLPTEA------VKSS 203
G GL Y D++ EFL +S+ + L+ L E L+PT A ++
Sbjct: 149 GNHWGLAYADIST-----GEFLTTQESNLEQLTQELMRLQPSEVLVPTNAPDLGSLLRPG 203
Query: 204 ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL----VSGFEIAPG 259
E A R T F + Q L + R VR L +A
Sbjct: 204 ETSEHLPACLPPAFCYALRSHTAFTQSEARQRLIQKFR-----VRSLEGLGCEHLPLAVR 258
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A G LL Y E E+ +R Y++ Y+ LD + R L + ++ D + SL
Sbjct: 259 AAGGLLQYLEETQKENPIALQALRTYTISDYLILDHQSRRNLEITQTVRDGTFHGSLLWA 318
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT TA MG R L W QPL+D+ I+AR D ++ ++D++LRQDLR L++I D+ER
Sbjct: 319 LDRTSTA-MGGRALRRWFLQPLIDIKGIHARQDTIEELIEDSSLRQDLRSCLRQIYDLER 377
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L A + +V L S RLP I ++ + R L + ++ ++
Sbjct: 378 LTGRAGSGSANARDLVALADSLARLPEIARIVETARSPYL-----RALQKVPAVLEELAA 432
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
LVE+ L L G +I + L + E+ ++ I +L + ++P
Sbjct: 433 KLRNYLVESPPIL--LSEGG-LIRPGVHSQLDERRTTVEADQQWIANLEVEERLKTEIPT 489
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
LK+ FG+ I++ + ++ + +I +T + ++ +LK+ +
Sbjct: 490 ---LKVGYNKTFGYYISISRSKADQVPQ----HYIRKQTLTNEERYITPELKERESRILN 542
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
++ + E+ ++ +E+ ++++ ++ DVL A++A Y RP++
Sbjct: 543 ARDDLNRLEYEVFAQLRSEVAEHAELIRNISRAVAAADVLCGLAEVAVY--QGYCRPEMV 600
Query: 620 PPDVGDIILEGSRHPCVEAQDWVNF-IPNDCKLIRGKSWFQ-----IITGPNMGGKSTFI 673
+ +I + RHP VE F +PN L G S Q I+TGPN GKS ++
Sbjct: 601 --EGREIHIVDGRHPVVEQSLPAGFFVPNSTFL--GSSDDQSPDLIILTGPNASGKSCYL 656
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQVG+ LMAQVGSFVP A + + D IF RVGA D G STFM EM ETA+IL A
Sbjct: 657 RQVGLIQLMAQVGSFVPASSARLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHA 716
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFN 793
T RSL+++DE+GRGT+T+DG +AWA+ E+L EI+A T+FATH+HEL LA
Sbjct: 717 TRRSLVLLDEIGRGTATFDGLSIAWAVAEYLATEIQARTIFATHYHELNELA-------- 768
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
+ VANY V+ + ++ L++V+PG D+S+GI A P V+ A++
Sbjct: 769 -SILTNVANYQVT--VKELPDQIIFLHQVQPGGADKSYGIEAGRLAGLPTVVIQRAKQVM 825
Query: 854 AELEDFTPSAV 864
++E + AV
Sbjct: 826 GQIEKHSKIAV 836
>gi|167630634|ref|YP_001681133.1| DNA mismatch repair protein muts [Heliobacterium modesticaldum
Ice1]
gi|167593374|gb|ABZ85122.1| DNA mismatch repair protein muts [Heliobacterium modesticaldum
Ice1]
Length = 910
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 300/580 (51%), Gaps = 41/580 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+R Y D +MRLD A R L + + + ++ SL G++++T TA MG RL+ W++QPL
Sbjct: 260 LRTYRTDHFMRLDPATRRNLELTRTMREGSRKGSLLGVIDKTVTA-MGGRLIKRWIEQPL 318
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
DV I R +V A VDD LRQD+R L+ + D+ERL + A + ++ L S
Sbjct: 319 TDVEAICKRQAVVAALVDDGLLRQDVRAGLRAVYDLERLAGKVAYGSANGRDLIALASSL 378
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD---LDQLENG 458
LP + L+Q + E+ +++LT + ET VD + + G
Sbjct: 379 EALPTVLDKLRQ-----GPSVLEKLASRIDALTPVAR-----RITETLVDDPPVSVRDGG 428
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I S + + L+ S + + + ++ + ++LK+ FG+ ++
Sbjct: 429 --LIRSGFHPEVDELRKIAGSGKEWLAHIEQRERERTGI---RSLKVGFNKVFGYFIEVS 483
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K + +I +T +G ++ +LK ++ E+ + L + +
Sbjct: 484 KANMTSV----PADYIRRQTLANGERYITPELKTYEEKILGAEEKLTQLEYRLFTELRSS 539
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ A ++ LDV + A +A Y PDI+ D +I ++G RHP VEA
Sbjct: 540 IEALLPQLQKTAEQVAHLDVFAALAQVA--VEQGYVCPDIH--DGTEIHIQGGRHPVVEA 595
Query: 639 QDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
F+PND + G++ +ITGPNM GKST++RQV + +L+AQVGSFVP A+I
Sbjct: 596 HLGPGVFVPNDTRFCDGETLL-LITGPNMAGKSTYMRQVALIVLLAQVGSFVPATAAAIG 654
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
V D IF RVGA D G STFM EM E A IL AT RSL+++DE+GRGTST+DG +A
Sbjct: 655 VVDRIFTRVGASDDLATGQSTFMVEMTEVAHILHHATSRSLVVLDEVGRGTSTFDGMAIA 714
Query: 758 WAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
WA+ E ++ + A +LFATH+HEL L + + GV Y ++ + + +
Sbjct: 715 WAVAEA-IQRLGAKSLFATHYHELVRL---------EETLPGVRCYTIA--VRESGDDIV 762
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
L+++ PG ++S+GI VA A P SV+ ARE A LE
Sbjct: 763 FLHQIRPGGVNKSYGIQVARLAGLPSSVILRAREILANLE 802
>gi|206972648|ref|ZP_03233590.1| DNA mismatch repair protein MutS [Bacillus cereus AH1134]
gi|365159455|ref|ZP_09355635.1| DNA mismatch repair protein mutS [Bacillus sp. 7_6_55CFAA_CT2]
gi|423412426|ref|ZP_17389546.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3O-2]
gi|423425907|ref|ZP_17402938.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3X2-2]
gi|423431789|ref|ZP_17408793.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4O-1]
gi|423503552|ref|ZP_17480144.1| DNA mismatch repair protein mutS [Bacillus cereus HD73]
gi|449090713|ref|YP_007423154.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206732461|gb|EDZ49641.1| DNA mismatch repair protein MutS [Bacillus cereus AH1134]
gi|363625167|gb|EHL76212.1| DNA mismatch repair protein mutS [Bacillus sp. 7_6_55CFAA_CT2]
gi|401104494|gb|EJQ12471.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3O-2]
gi|401110654|gb|EJQ18553.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3X2-2]
gi|401116545|gb|EJQ24383.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4O-1]
gi|402458906|gb|EJV90646.1| DNA mismatch repair protein mutS [Bacillus cereus HD73]
gi|449024470|gb|AGE79633.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 890
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ N+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLNQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|423558667|ref|ZP_17534969.1| DNA mismatch repair protein mutS [Bacillus cereus MC67]
gi|401191935|gb|EJQ98957.1| DNA mismatch repair protein mutS [Bacillus cereus MC67]
Length = 887
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKTNLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L EN ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EENLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
ES++ A+E A+LE
Sbjct: 776 ESLIARAKEVLAQLE 790
>gi|410495886|ref|YP_006905732.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410441046|emb|CCI63674.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 851
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 225/740 (30%), Positives = 362/740 (48%), Gaps = 84/740 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ + F +D L + D D L + L+ T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILESFNSPF--------VDKL--VNDIDSLPELEYLIRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLV----PDHFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--IKIQEGRHAVVEKVMGVQEYIPNSISFNQETS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTMFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A PE++++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPEALLSRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGS 875
E SA +IS +K+E S
Sbjct: 785 EAQAQSAEIISVPSKVEPSS 804
>gi|423437224|ref|ZP_17414205.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4X12-1]
gi|401120379|gb|EJQ28175.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4X12-1]
Length = 890
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ N+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLNQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|423406806|ref|ZP_17383955.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-3]
gi|401660096|gb|EJS77579.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-3]
Length = 893
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 209/647 (32%), Positives = 344/647 (53%), Gaps = 77/647 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTNR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEV 873
+S++ A+E A+LE + TP V+ +A +EV
Sbjct: 776 DSLIARAKEVLAQLEGQEEIIIPKRTEVKVQEVTPEPVVVKEAPVEV 822
>gi|422874017|ref|ZP_16920502.1| DNA mismatch repair protein MutS [Clostridium perfringens F262]
gi|380305012|gb|EIA17295.1| DNA mismatch repair protein MutS [Clostridium perfringens F262]
Length = 909
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 318/582 (54%), Gaps = 39/582 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ + E SSL+K Y L+ L D L+E S+ D L++G
Sbjct: 371 GKIPNVKGII---ENCTSSLLK-NYHHNLDDLRD------IYELLEKSIKEDPSLTLKDG 420
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ +I +++ + L+ + + + I SL + + + K+LK+ FG+ I+
Sbjct: 421 D-LIKDGFNSEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIEIS 476
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 477 KANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNE 533
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP VE
Sbjct: 534 VENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVVEK 589
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+IS
Sbjct: 590 VIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANIS 649
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
+ D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG +A
Sbjct: 650 IVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIA 709
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
W++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 710 WSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVDNN 758
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E +LE
Sbjct: 759 IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILEKLE 800
>gi|358052771|ref|ZP_09146594.1| DNA mismatch repair protein MutS [Staphylococcus simiae CCM 7213]
gi|357257744|gb|EHJ07978.1| DNA mismatch repair protein MutS [Staphylococcus simiae CCM 7213]
Length = 872
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 323/608 (53%), Gaps = 49/608 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL++
Sbjct: 243 YAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLINK 301
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+I RL+IV+AF + R LR +L ++ DIERL+ + + +++L S +
Sbjct: 302 EQIEERLNIVEAFSEQFVERDTLRNYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEI 361
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P+I++ L Q SL K L+PL+ L + N + S+ + G + +
Sbjct: 362 PHIKALLDSMNHQ--SLAKINQLEPLDDLLEVLE-NSLVEEPPISIK----DGGLFKVGF 414
Query: 465 SY--DTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
++ D L A KN + L ++T K+LK+ FG+ IT+
Sbjct: 415 NHQLDEYLEASKNGKSWLAELQQKERERTGI-------KSLKISFNKVFGYFIEITRANL 467
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRVIQ 577
I + ++ +T + +F +LK+ LG + + V EY +L + +
Sbjct: 468 QNI-EPANFGYMRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----QLFVNLRE 521
Query: 578 TAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE 637
++E + A ++SELD L SFA++A Y+RP+ + + ++ L SRHP VE
Sbjct: 522 EVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YSRPEFS--ESKELKLIDSRHPVVE 577
Query: 638 -AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
D+ +++PNDC L R ++ +ITGPNM GKST++RQV + +MAQ+G++VPC+ A +
Sbjct: 578 RVMDYNDYVPNDCLLDRD-TFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCESAIL 636
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
+ D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGTSTYDG L
Sbjct: 637 PIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLAL 696
Query: 757 AWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
A A+ E++ + A TLF+TH+HELT L + + + N HV+A + +L
Sbjct: 697 AQAMIEYVAQTSHAKTLFSTHYHELTTL---------DQVLPNLKNVHVAA--NEYKGEL 745
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS----AVISDDAKIE 872
L+KV+ GA D S+GI VA+ A+ PE V+ A+ E E T + A ++ + IE
Sbjct: 746 IFLHKVKDGAVDDSYGIQVAKLADLPEQVINRAQVILNEFEQDTNNNKDIASLTSTSNIE 805
Query: 873 VGSKRKRI 880
+K++
Sbjct: 806 NNDDKKQM 813
>gi|423395931|ref|ZP_17373132.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-1]
gi|401653673|gb|EJS71217.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-1]
Length = 893
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 209/647 (32%), Positives = 344/647 (53%), Gaps = 77/647 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTNR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEV 873
+S++ A+E A+LE + TP V+ +A +EV
Sbjct: 776 DSLIARAKEVLAQLEGQEEIIIPKRTEVKVQEVTPEPVVVKEAPVEV 822
>gi|182626334|ref|ZP_02954089.1| DNA mismatch repair protein MutS [Clostridium perfringens D str.
JGS1721]
gi|177908353|gb|EDT70898.1| DNA mismatch repair protein MutS [Clostridium perfringens D str.
JGS1721]
Length = 909
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 317/582 (54%), Gaps = 39/582 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ + E SSL+K Y L+ L D L+E S+ D L++G
Sbjct: 371 GKIPNVKGII---ENCTSSLLK-NYHHNLDDLRD------IYELLEKSIKEDPSLTLKDG 420
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ +I +++ + L+ + + + I SL + + + K+LK+ FG+ I+
Sbjct: 421 D-LIKDGFNSEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIEIS 476
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 477 KANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNE 533
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP VE
Sbjct: 534 VENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVVEK 589
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+IS
Sbjct: 590 VIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANIS 649
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
V D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG +A
Sbjct: 650 VVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIA 709
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
W++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 710 WSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVDNN 758
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E LE
Sbjct: 759 IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILETLE 800
>gi|116754772|ref|YP_843890.1| DNA mismatch repair protein MutS [Methanosaeta thermophila PT]
gi|121694816|sp|A0B976.1|MUTS_METTP RecName: Full=DNA mismatch repair protein MutS
gi|116666223|gb|ABK15250.1| DNA mismatch repair protein MutS [Methanosaeta thermophila PT]
Length = 857
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 203/624 (32%), Positives = 312/624 (50%), Gaps = 55/624 (8%)
Query: 263 ALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNR 322
A+LSY +S IR S YM LD +R L + + D +++ +L +++
Sbjct: 222 AILSYLRETRIQSVDHIKPIRMISSSEYMLLDEITLRNLEIFRNLRDGSRSGTLMEILDE 281
Query: 323 TCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMH 382
T T MG R L WL+ P + + I R D ++ V +R+++ + L +SD+ER++
Sbjct: 282 TVTP-MGSRTLARWLQMPSMSLEVIRRRQDAIEEMVRRAVIREEISELLDGLSDLERIIG 340
Query: 383 NLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKF 442
+ AG + +V L S R+P I A+ E ++ I++R D L+
Sbjct: 341 RVSLGNAGPKDLVALRSSLRRIPEIAHAMSALESEYLVEIRKRL--------DASELDDL 392
Query: 443 IALVETSVDLDQLENGE--YMISSSYDTGL----SALKNEQESLERQIHSLHKQTASDLD 496
+ L+E ++ D + +I Y L SAL+N + + S K+T
Sbjct: 393 VVLLERALSDDPPTSPRDGGVIRDGYSPELDEIRSALRNGRSWIAELESSERKRTGI--- 449
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
K+LK+ FG+ +TK P + + +I +T + +F +LK++ +
Sbjct: 450 ----KSLKVGYNNVFGYYIEVTK---PNL-SMVPDDYIRKQTLSNAERFVTRELKEVESR 501
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
E + E+ + + + + +A + ELD +L A RP
Sbjct: 502 VLSAQERSSALEYEVFLDLRGQVASRTRSVQEVAAAIGELDTILGLTRAA--LMGAMVRP 559
Query: 617 DINPPDVG-DIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
+ D G ++IL SRHP ++ F+PND + SWF I+TGPNM GKSTF+RQ
Sbjct: 560 VV---DAGREVILRDSRHPVLDRVMKGGFVPNDLTMDE-SSWFMILTGPNMAGKSTFMRQ 615
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +MAQ+GSFVP A I + D IF RVGA D + G STFM EM E A+IL AT
Sbjct: 616 VALIAIMAQIGSFVPASYAKIGLIDRIFTRVGARDDLVSGRSTFMVEMSELANILVSATK 675
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
SLI++DE+GRGTST+DG +AWA+ E++ I+A T+FATH+H+LT L
Sbjct: 676 DSLILLDEIGRGTSTFDGLSIAWAVSEYIHSRIKAKTIFATHYHQLTQL----------- 724
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+ G+ NY S + R +T L V PGA ++S+GIHVA A PE V+ +A E
Sbjct: 725 NLPGIVNY--SMAVKEEGRSITFLRTVVPGATNKSYGIHVARLAGVPEHVI----RRAEE 778
Query: 856 LEDFTPSAVISDDAKIEVGSKRKR 879
L D +I + A IE+ R +
Sbjct: 779 LLD-----IIEEQAAIEIRKCRSK 797
>gi|210612717|ref|ZP_03289432.1| hypothetical protein CLONEX_01634 [Clostridium nexile DSM 1787]
gi|210151410|gb|EEA82418.1| hypothetical protein CLONEX_01634 [Clostridium nexile DSM 1787]
Length = 875
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 219/689 (31%), Positives = 346/689 (50%), Gaps = 69/689 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL Y S I Y+ YM LDS++ R L + E+ + K SL +
Sbjct: 230 AAGALLQYLYETQKTSLAHLTGIISYTTGKYMLLDSSSRRNLELCETLREKQKRGSLLWV 289
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R L +++QPL+ E+ RLD V DD R+++R++L + D+ER
Sbjct: 290 LDKTKTA-MGARTLRSFVEQPLIHKEEVIKRLDAVGELKDDAISREEIREYLTPVYDLER 348
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDD 437
L+ + + A + ++ S LP+I+ L + + L+KE Y LD LE L
Sbjct: 349 LISKISYQSANPRDLIAFKSSLEMLPHIKYILGDMK---TPLLKELYEELDTLEELCQ-- 403
Query: 438 HLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
L++ ++ L E G +I Y + L+N + + + L +
Sbjct: 404 -------LIQHAICEEPPLAMKEGG--IIKEGYHPDVDKLRNAKTEGKTWLAELETEERE 454
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ K LK+ FG+ +T + + T + +T + ++ +LK+L
Sbjct: 455 KTGI---KNLKIKYNKVFGYYLEVTNSYKELVPDYYTRK----QTLANAERYIIPRLKEL 507
Query: 554 GDQ--------YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
D Y E Y N + + + V++ T A ++++DV S A +
Sbjct: 508 EDTILGAEDKLYALEYELYCNVRDTIADEVVRIQKT--------AKAIAQIDVFASLALV 559
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGP 664
A Y RP IN V DI + RHP VE + FI ND L K+ IITGP
Sbjct: 560 AER--NNYVRPKINEKGVIDI--KNGRHPVVEKMIPNDMFIANDTYLDDKKNRVSIITGP 615
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQ + +LMAQ+GSFVP + A+I + D IF RVGA D G STFM EM
Sbjct: 616 NMAGKSTYMRQTALIVLMAQIGSFVPAETANIGIVDRIFTRVGASDDLASGQSTFMVEMT 675
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV--EEIRAPTLFATHFHELT 782
E A+IL+ AT +SL+I+DE+GRGTST+DG +AWA+ EH+ + + A TLFATH+HELT
Sbjct: 676 EVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVVEHISNGKLLGAKTLFATHYHELT 735
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ V NY ++ + + L K+ G D+S+GI VA+ A P
Sbjct: 736 ELEG---------KIDSVNNYCIA--VKEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVP 784
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS--DPNDMSRGA----ARAHQF 896
ESV+ A+E +EL + + + D ++ G +K++ D D+++ + +
Sbjct: 785 ESVIARAKEIVSELSEADITTRVR-DISVQSGDTKKKMKKYDEVDLAQMSLFDTVKDDDV 843
Query: 897 LKEFSDMPLETMDLKEALERVKRMKDDLE 925
LKE ++ + + +AL + R+++ L+
Sbjct: 844 LKELEELDVAHLTPMDALNTIYRLQNKLK 872
>gi|110799241|ref|YP_695804.1| DNA mismatch repair protein MutS [Clostridium perfringens ATCC
13124]
gi|123049875|sp|Q0TRD6.1|MUTS_CLOP1 RecName: Full=DNA mismatch repair protein MutS
gi|110673888|gb|ABG82875.1| DNA mismatch repair protein MutS [Clostridium perfringens ATCC
13124]
Length = 910
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 317/584 (54%), Gaps = 43/584 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDHLNKFIALVETSVDLD---QLE 456
++P ++ + E SSL+K + LD L + D L+E S+ D L+
Sbjct: 371 GKIPNVKGII---ENCTSSLLKNYHHNLDDLRDIYD---------LLEKSIKEDPSLTLK 418
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
+G+ +I ++ + L+ + + + I SL + + + K+LK+ FG+
Sbjct: 419 DGD-LIKDGFNGEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIE 474
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
I+K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 475 ISKANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIR 531
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP V
Sbjct: 532 NEVENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVV 587
Query: 637 E-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+
Sbjct: 588 EKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKAN 647
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
ISV D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG
Sbjct: 648 ISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLS 707
Query: 756 LAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
+AW++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 708 IAWSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVD 756
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E LE
Sbjct: 757 NNIIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILETLE 800
>gi|229086318|ref|ZP_04218496.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-44]
gi|228697013|gb|EEL49820.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-44]
Length = 886
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 201/608 (33%), Positives = 333/608 (54%), Gaps = 48/608 (7%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
A+G LL+Y S + Y + +M++D + R L + E+ K SL
Sbjct: 216 AAVGRLLNYVLRTQKRSLDHLQPVDIYYTNQFMKIDVHSKRNLELTETLRTKEKTGSLLW 275
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
L+++T TA MG R+L W+++PL+ +I RL++V+ FV+D LR+DL++ LK + D+E
Sbjct: 276 LLDKTKTA-MGGRMLKQWMERPLIQKEKIEERLEMVETFVNDYFLREDLKEKLKEVYDLE 334
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL + + +++L +S +++P I A+ + +++ + + DP ESLT+
Sbjct: 335 RLAGKVAYGNVNARDLLQLRRSLLQVPAILEAISLLDNSYAARLIQG-ADPCESLTE--- 390
Query: 439 LNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L+ S+ + +++G+ +I Y+ L + ++ + I L K+ +
Sbjct: 391 ------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELEKR---ER 440
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
++ K+LK+ FG+ +TK E + +K +T + +F +L
Sbjct: 441 EITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAERFITDEL 492
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
K+ + E+ + +L + + F + LA ++SELDVL SFA ++
Sbjct: 493 KEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFATVSEE-- 550
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGK 669
+ +P + D +I ++ RHP VE + ++PNDC + F +ITGPNM GK
Sbjct: 551 EQFVKPVLT--DKREIFIKDGRHPVVEKVLNGKLYVPNDCVMPENMDMF-LITGPNMSGK 607
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM EMLE +
Sbjct: 608 STYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNA 667
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENA 789
+ A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT L
Sbjct: 668 IANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVL----- 722
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
E + +Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P+S++ A
Sbjct: 723 -EDSLEQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARA 776
Query: 850 REKAAELE 857
+E A+LE
Sbjct: 777 KEVLAQLE 784
>gi|427431014|ref|ZP_18920710.1| DNA mismatch repair protein MutS [Caenispirillum salinarum AK4]
gi|425878191|gb|EKV26910.1| DNA mismatch repair protein MutS [Caenispirillum salinarum AK4]
Length = 909
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 223/686 (32%), Positives = 342/686 (49%), Gaps = 44/686 (6%)
Query: 249 DLVSGFEIAP-GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK 307
D GF A A G L+ Y EL +R+ + M +D+A R L + E+
Sbjct: 252 DAFGGFSRAEVAAAGTLVDYVELTQKGKLPRIGALRRMGEGAAMEIDAATRRNLELAETL 311
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
T K SL +++RT T G G RLL L PL + EI+ARLD VQ FV+ +R+D+
Sbjct: 312 TGERKG-SLLQVIDRTVT-GAGARLLAAHLSAPLTEPAEIDARLDAVQFFVEAPTVREDV 369
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYL 427
R+ LKR D+ER + L R G + + + + ++P +R A+ E +++ K
Sbjct: 370 RERLKRCPDVERALSRLSLGRGGPRDLANVRDALDQVPGLRVAIT--ESGLAAVPKA--- 424
Query: 428 DPLESLTDDDHLNKFIALVET-----SVDLDQLENGEYMISSSYDTGLSALKNEQESLER 482
L ++ + L + LVE DL L I+ Y L L+ ++ +R
Sbjct: 425 --LSAVCE--RLGRHDVLVERLARALDTDLPMLARDGGFIAPGYHPQLDELRTLRDESKR 480
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
I L A+ ++ +LK+ G+ + K+ K+ F+ +T +
Sbjct: 481 LIAGLQ---ATYIEQTGIASLKVKHNNVLGYFLEVPAKQGDKLLADKEGPFLHRQTMANA 537
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
V+F+ +L +L D+ + ++ + EL +++ + + A L+ELDV
Sbjct: 538 VRFSTVELSELEDKIRGAADKALALELELFADLVKEVLARGQEIADAAAALAELDVTAGL 597
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ----DWVNFIPNDCKLIRGKSWF 658
A+LA Y RP + DI G RHP VEA F+ NDC L +
Sbjct: 598 AELAVD--RRYVRPVVEQGTAFDI--RGGRHPVVEAALERAGDGPFVANDCDL-SPEQRL 652
Query: 659 QIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVST 718
+ITGPNM GKSTF+RQ + ++AQ+G+FVP + A I V D +F+RVGA D RG ST
Sbjct: 653 WLITGPNMAGKSTFLRQNALIAILAQMGAFVPAESARIGVVDRLFSRVGAADDLARGRST 712
Query: 719 FMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHF 778
FM EM+ETA+IL AT+RSL+I+DE+GRGT+T+DG +AWA E+L E R LFATH+
Sbjct: 713 FMVEMVETAAILNQATERSLVILDEIGRGTATFDGLSIAWATVENLHEANRCRALFATHY 772
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HELTAL T ++ ++ + S + ++ L++V GA D+S+GIHVA
Sbjct: 773 HELTAL---------TARLKRLSCH--SMRVKEWQGEVVFLHEVAAGAADRSYGIHVARL 821
Query: 839 ANFPESVVTLAREKAAELEDFTPSAVI---SDDAKIEVGSKRKRISDPNDMSRGAARAHQ 895
A P +V+ A E LE S+ I +DD + + R +
Sbjct: 822 AGLPPAVIARAEEVLETLESGEQSSAITRLADDLPL-FAAMAARPEPKKQAAAEPPPPSP 880
Query: 896 FLKEFSDMPLETMDLKEALERVKRMK 921
+ DM +++ +EALE++ R+K
Sbjct: 881 VEEALKDMDPDSLTPREALEQLYRLK 906
>gi|406025332|ref|YP_006705633.1| DNA mismatch repair protein mutS [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
gi|404432931|emb|CCM10213.1| DNA mismatch repair protein mutS [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 865
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 208/615 (33%), Positives = 315/615 (51%), Gaps = 47/615 (7%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIR---KYSLDSYMRLDSAAMRALNVLESK 307
+S + A G +L Y LS+ + +IR + Y+ LD +RAL +L +
Sbjct: 225 ISDYSAGIVAAGVILHY---LSETEHKAIKHIRSMVRLEFHQYVWLDPFTVRALELLVPQ 281
Query: 308 TDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDL 367
+L +++RT T MG RLL WL PL +V I RLDIV+ V D L L
Sbjct: 282 QVGGT--ALIEILDRTVTP-MGARLLKKWLLFPLKEVVVIQERLDIVEYLVKDAPLATLL 338
Query: 368 RQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK-ERY 426
HLK+I D+ERL+ + R +++V L ++ ++ I++ LQ F L K
Sbjct: 339 VNHLKQIGDLERLISKVAVGRVNPREMVALKRALQQVQSIQTVLQTIP--FPLLQKMNAQ 396
Query: 427 LDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
L +L D H ++ L + G +I + L L + + +
Sbjct: 397 LHGCHALVDRIHQT-----LQEQPPLLTHQGG--LIQPHVNDKLDGLNEIMRTGKDYLVE 449
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
L KQ + ++P +LK+ FG+ ++ + K+ T +I +T +++
Sbjct: 450 LQKQESQRTNIP---SLKVAYNRVFGYYLEVSNAH----KNKVPTDWIRKQTLAHAERYS 502
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
+ LK+ Q EE + +++L ++ AV + + A +++LD LSFA A
Sbjct: 503 SEALKQYEAQILHAGEEAQLLEQQLYQALVAEAVEYIPQIQENAKYIAQLDCYLSFAKQA 562
Query: 607 SSCPTPYTRPDINPPDVGDII-LEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITG 663
C Y++P + D G ++ L+ +RHP +E + ++ + PND L +ITG
Sbjct: 563 --CEYHYSKPMV---DNGTLLHLKNNRHPVIEQRLPIDKTYTPNDMYLDPSSQQIIVITG 617
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKS +RQV + +LMAQ+GSFVP A I V D IF RVGA D +G STFM EM
Sbjct: 618 PNMAGKSALLRQVALTVLMAQMGSFVPASDAQIGVVDKIFTRVGASDNLAQGESTFMMEM 677
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHFHEL 781
ETASI+ +DRSL+++DE+GRGTSTYDG +AWA+ E+L R A TLFATH+HEL
Sbjct: 678 TETASIMHNLSDRSLVLMDEIGRGTSTYDGISIAWALVEYLHHHPRYKAKTLFATHYHEL 737
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
LA K + V N++V+ + +K+ L+K+ PG SFGIHVA+ A
Sbjct: 738 NELA---------KSLPRVKNFNVA--VQEIEQKILFLHKLVPGGSQHSFGIHVAQMAGM 786
Query: 842 PESVVTLAREKAAEL 856
P ++ ARE A L
Sbjct: 787 PSIILERAREVLAHL 801
>gi|229012953|ref|ZP_04170118.1| DNA mismatch repair protein mutS [Bacillus mycoides DSM 2048]
gi|229061372|ref|ZP_04198718.1| DNA mismatch repair protein mutS [Bacillus cereus AH603]
gi|228717911|gb|EEL69557.1| DNA mismatch repair protein mutS [Bacillus cereus AH603]
gi|228748207|gb|EEL98067.1| DNA mismatch repair protein mutS [Bacillus mycoides DSM 2048]
Length = 884
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 349/661 (52%), Gaps = 77/661 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEVGSKRKRISDPNDM 886
ES++ A+E A+LE + P V+ + E+ K++ + + +
Sbjct: 770 ESLIARAKEVLAQLEGQEEIVIPKRVEVKVPEVAPEPVVVKEEPAEIQEKKEETEEDSQL 829
Query: 887 S 887
S
Sbjct: 830 S 830
>gi|423511802|ref|ZP_17488333.1| DNA mismatch repair protein mutS [Bacillus cereus HuA2-1]
gi|402450063|gb|EJV81897.1| DNA mismatch repair protein mutS [Bacillus cereus HuA2-1]
Length = 890
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 349/661 (52%), Gaps = 77/661 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEVGSKRKRISDPNDM 886
ES++ A+E A+LE + P V+ + E+ K++ + + +
Sbjct: 776 ESLIARAKEVLAQLEGQEEIVIPKRVEVKVPEVAPEPVVVKEEPAEIQEKKEETEEDSQL 835
Query: 887 S 887
S
Sbjct: 836 S 836
>gi|423598919|ref|ZP_17574919.1| DNA mismatch repair protein mutS [Bacillus cereus VD078]
gi|401237189|gb|EJR43646.1| DNA mismatch repair protein mutS [Bacillus cereus VD078]
Length = 890
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 349/661 (52%), Gaps = 77/661 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEVGSKRKRISDPNDM 886
ES++ A+E A+LE + P V+ + E+ K++ + + +
Sbjct: 776 ESLIARAKEVLAQLEGQEEIVIRKRVEVKVPEVAPEPVVVKEEPAEIQEKKEETEEDSQL 835
Query: 887 S 887
S
Sbjct: 836 S 836
>gi|255531781|ref|YP_003092153.1| DNA mismatch repair protein MutS [Pedobacter heparinus DSM 2366]
gi|255344765|gb|ACU04091.1| DNA mismatch repair protein MutS [Pedobacter heparinus DSM 2366]
Length = 858
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 306/594 (51%), Gaps = 38/594 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I + D YM LD +R L ++ S D +LF ++++T T MG RLLH W+ PL
Sbjct: 246 ISRLEEDKYMWLDRFTIRNLELVSSAND--NAVTLFEVLDQTSTP-MGARLLHKWIIMPL 302
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ I RL +V V AL Q+ H+K+I D+ERL+ + ++ G +++ +L ++
Sbjct: 303 KELKPIEERLGMVDFLVKHDALLQEFLSHIKQIGDLERLISKVGLQKVGPRELCQLKKAL 362
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
+ +++ + + F S++ ++ L+P S+ + L + E D L +
Sbjct: 363 YHIEAVKNVAEASKNPFLSVLADQ-LNPCLSIREK--LER-----ELQQDPPALLIKGNV 414
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I+ D L L+ + + + K+ A+ +P +LK+ FG+ +T
Sbjct: 415 IADGIDEELDRLRKISFGGKDYLVEIQKREAAATGIP---SLKVAFNNVFGYYLEVTHTH 471
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
+ K+ +I +T ++ +LK+ +Q E+ + + +L N ++ T
Sbjct: 472 ----KDKVPADWIRKQTLVSAERYITPELKEYEEQILGAEEKIQQIEVKLYNELMYQVST 527
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ + + A ++++LDVLL FA LA Y +P+IN V DI +G RHP +E +
Sbjct: 528 YIKPIQLNAFLIAQLDVLLCFAQLA--VKNHYVKPEINKGKVLDI--KGGRHPVIEQRLP 583
Query: 642 VN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
V +I ND L IITGPNM GKS +RQ G+ +LM Q+G FVP A+I +
Sbjct: 584 VGEAYITNDVFLDNDTQQIIIITGPNMSGKSAILRQTGLIVLMGQMGCFVPAKAAAIGLV 643
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF RVGA D G STFM EM ETASIL +D SLI++DE+GRGTSTYDG +AWA
Sbjct: 644 DKIFTRVGASDNLSSGESTFMVEMNETASILNNISDNSLILLDEIGRGTSTYDGISIAWA 703
Query: 760 ICE--HLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
I E H R TLFATH+HEL LA M + N++VS I K+
Sbjct: 704 IAEFLHTHPTARPKTLFATHYHELNELA---------TTMNRIRNFNVS--IKELGNKVI 752
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE-DFTPSAVISDDAK 870
L K+ PG + SFGIHVA+ A P ++ A E +LE D T I D K
Sbjct: 753 FLRKLIPGGSEHSFGIHVAKMAGMPPKLINRANEILKKLEIDRTEGQSIKDSIK 806
>gi|422345812|ref|ZP_16426726.1| DNA mismatch repair protein mutS [Clostridium perfringens
WAL-14572]
gi|373227477|gb|EHP49791.1| DNA mismatch repair protein mutS [Clostridium perfringens
WAL-14572]
Length = 909
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 317/584 (54%), Gaps = 43/584 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDHLNKFIALVETSVDLD---QLE 456
++P ++ + E SSL+K + LD L + D L+E S+ D L+
Sbjct: 371 GKIPNVKGII---ENCTSSLLKNYHHNLDDLRDIYD---------LLEKSIKEDPSLTLK 418
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
+G+ +I ++ + L+ + + + I SL + + + K+LK+ FG+
Sbjct: 419 DGD-LIKDGFNGEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIE 474
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
I+K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 475 ISKANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIR 531
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP V
Sbjct: 532 NEVENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVV 587
Query: 637 E-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+
Sbjct: 588 EKVIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKAN 647
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
ISV D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG
Sbjct: 648 ISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLS 707
Query: 756 LAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
+AW++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 708 IAWSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVD 756
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E LE
Sbjct: 757 NNIIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILETLE 800
>gi|423488892|ref|ZP_17465574.1| DNA mismatch repair protein mutS [Bacillus cereus BtB2-4]
gi|423494617|ref|ZP_17471261.1| DNA mismatch repair protein mutS [Bacillus cereus CER057]
gi|423498592|ref|ZP_17475209.1| DNA mismatch repair protein mutS [Bacillus cereus CER074]
gi|423661391|ref|ZP_17636560.1| DNA mismatch repair protein mutS [Bacillus cereus VDM022]
gi|401151678|gb|EJQ59124.1| DNA mismatch repair protein mutS [Bacillus cereus CER057]
gi|401159250|gb|EJQ66635.1| DNA mismatch repair protein mutS [Bacillus cereus CER074]
gi|401301432|gb|EJS07021.1| DNA mismatch repair protein mutS [Bacillus cereus VDM022]
gi|402433247|gb|EJV65301.1| DNA mismatch repair protein mutS [Bacillus cereus BtB2-4]
Length = 890
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 349/661 (52%), Gaps = 77/661 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEVGSKRKRISDPNDM 886
ES++ A+E A+LE + P V+ + E+ K++ + + +
Sbjct: 776 ESLIARAKEVLAQLEGQEEIVIPKRVEVKVPEVAPEPVVVKEEPAEIQEKKEETEEDSQL 835
Query: 887 S 887
S
Sbjct: 836 S 836
>gi|373106358|ref|ZP_09520661.1| DNA mismatch repair protein MutS [Stomatobaculum longum]
gi|371652733|gb|EHO18141.1| DNA mismatch repair protein MutS [Stomatobaculum longum]
Length = 867
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 297/578 (51%), Gaps = 34/578 (5%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++ Y ++Y+ +D+A+ R L + E+ D NK+ SL +++RT TA MG R L L++PL
Sbjct: 253 LKAYRGNAYLFIDAASRRNLELTETLRDKNKHGSLLWVLDRTKTA-MGARFLRNLLEKPL 311
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
L + EI R D +Q F+ R++LR++L I D+ERLM + A + ++ S
Sbjct: 312 LGIPEIEVRQDAIQEFLSRYIDREELREYLAPIYDMERLMGRITLGSANARDMLAFGSSI 371
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
LP I+ LQ FS+ + + L+ L D L+ +A L G ++
Sbjct: 372 AALPPIKDLLQS----FSAPLLRSFSQSLDDLRD---LSALLARAIADDPPLTLREG-HI 423
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y + + ++ + L ++ + + K L++ FG+ F +TK
Sbjct: 424 IKDGYHEDVDRYRRASTEGKQWLAELEERERNKTGI---KNLRIKYNKVFGYYFEVTKSA 480
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
++ F +T + ++T +L KL + E+ + +L V Q
Sbjct: 481 LSQV----PDYFQRRQTLANAERYTTEELGKLEESILGAEEKLLTLEFDLFQEVRQKLSA 536
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQD 640
++ A +++ LD LLS AD+A Y RP + G + + G RHP VE +
Sbjct: 537 EVARIQTSAGIIAYLDALLSLADVAERYQ--YVRPKLTAD--GPLRIVGGRHPVVERMME 592
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
F+ ND L ++ +ITGPNM GKST++RQ + L+AQ GSFVP A I + D
Sbjct: 593 SGRFVENDTLLDSEENRIAVITGPNMAGKSTYMRQTALIALLAQTGSFVPATEAEIGISD 652
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
IF RVGA D G STFM EM E A+IL+ AT RSLII+DE+GRGTST+DG +AWA+
Sbjct: 653 RIFTRVGASDDLASGQSTFMVEMTEVANILRNATKRSLIILDEIGRGTSTFDGLSIAWAV 712
Query: 761 CEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
E+L A TLFATH+HELT L + GV NY ++ + +
Sbjct: 713 VEYLATGRLAGAKTLFATHYHELTEL---------EGSIPGVHNYCIA--VKEQGDTIAF 761
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
L K+ G DQS+GI VA+ A PE+V ARE AAEL
Sbjct: 762 LRKIVKGGADQSYGIQVAKLAGVPETVTARAREIAAEL 799
>gi|283797910|ref|ZP_06347063.1| DNA mismatch repair protein MutS [Clostridium sp. M62/1]
gi|291074377|gb|EFE11741.1| DNA mismatch repair protein MutS [Clostridium sp. M62/1]
Length = 881
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 225/701 (32%), Positives = 359/701 (51%), Gaps = 65/701 (9%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+S +E A GA+LSY + I Y+ YM LD++ R L + E+ +
Sbjct: 221 LSEYEAGTIAAGAVLSYLYETQKSTLDHLTAITPYTTGQYMMLDTSTRRNLELTETLREK 280
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
K +L ++++T TA MG R+L +++QPL+D I AR + ++ + R+++ ++
Sbjct: 281 QKRGTLLWVLDKTKTA-MGARMLRSFVEQPLIDREGILARQNAIEELNMNYISREEMAEY 339
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSS-LIKE--RYL 427
L I D+ERL+ + + A + ++ S LP+I+ L G+F + L++E +
Sbjct: 340 LNAIYDLERLIGRISYKTANPRDLIAFKNSLAMLPHIKKIL----GEFGADLLREVDSGM 395
Query: 428 DPLESLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQI 484
D LE LT AL+E ++ D + +G +I Y L++ + + +
Sbjct: 396 DTLEELT---------ALIEHAIVDDPPISVRDGG-IIKDGYSEEADRLRHAKTEGKDWL 445
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
+L + + K LK+ FG+ F +T + ++ F+ +T + +
Sbjct: 446 AALEAEEREKTGI---KNLKIKFNKVFGYYFEVTNS----FKDQVPDYFVRRQTLTNAER 498
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
FT +LK+L + + + +L +V TA E + A ++ LDVL+S +
Sbjct: 499 FTTDRLKELEGTILGAEDRLFSLEYDLFCQVRDTAGAQVEKIQQTAKAIALLDVLISLST 558
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITG 663
+A+ Y +P IN + G I ++ RHP VE + F+ ND L GK+ IITG
Sbjct: 559 VATR--HNYVKPKIN--ERGVIHIKNGRHPVVEQMMRDDMFVSNDTYLDNGKNRISIITG 614
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST++RQ + LMAQ+GSFVP D A+I + D IF RVGA D G STFM EM
Sbjct: 615 PNMAGKSTYMRQTALITLMAQIGSFVPADEANIGLCDRIFTRVGASDDLASGQSTFMVEM 674
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHEL 781
E A+IL+ AT SL+I+DE+GRGTST+DG +AWA+ E++ + + A TLFATH+HEL
Sbjct: 675 TEVANILRNATRNSLLILDEIGRGTSTFDGLSIAWAVVEYISNTKTLGAKTLFATHYHEL 734
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T L E A + GV NY ++ + + L K+ G D+S+GI VA+ A
Sbjct: 735 TEL--EGA-------ISGVNNYCIA--VKEQGDNIVFLRKIVKGGADKSYGIQVAKLAGV 783
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAK-IEVGSK----RKRISDPNDMSR------GA 890
PE V+T A+E EL D A I+ AK I GS+ +K + P+++
Sbjct: 784 PEQVITRAKELVEELSD----ADITARAKEIASGSRTVQPKKSVERPDEVDLQQMSIFDT 839
Query: 891 ARAHQFLKEFSDMPLETMDLKEALERV----KRMKDDLEKD 927
R ++E ++ + + EAL + R+K+ E D
Sbjct: 840 VREEDIIRELMEIDISRLSPVEALVTLDKFQSRLKNRWEAD 880
>gi|432329250|ref|YP_007247394.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
gi|432135959|gb|AGB05228.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
Length = 829
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 203/641 (31%), Positives = 327/641 (51%), Gaps = 53/641 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++ Y D ++ LDS ++ L V ++ + ++LF +N C MG RLL W+++PL
Sbjct: 236 LQGYFRDRFLILDSTTLKNLEVFKNFL-GEERYTLFFTIN-ACVTPMGSRLLKRWMQRPL 293
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+V+EI R D V+ + + +R L I D+ER+ + RA + ++ L +
Sbjct: 294 KNVDEIEKRQDAVEELTKKQMMLESIRDVLSHIKDLERIKTRISLGRARPKDLIALKEG- 352
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
L Y Q + F S I + +E L K + L+E S+ D G+ +
Sbjct: 353 --LKY----AQDLKMNFESKILREESEKIEGL------GKIVDLIERSIAGD-YPIGDGV 399
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y L +L++ + I + ++ + K+LK+ G+ ++K
Sbjct: 400 IKRGYSRELDSLRDLTLHAQDLIGKMEERERRRTGI---KSLKIGYNDVMGYYIEVSKAN 456
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
K+ + +T K+ +F +LK L + E+ + ++ L +I+
Sbjct: 457 LSKVPDHYKRK----QTLKNSERFITDELKDLEYRILSAKEKINDIEQALYEEIIEKLKG 512
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDW 641
+ +A ++ +D + S A +A YTRP ++ + DI ++ RHP VE +
Sbjct: 513 ETSRIARVAEAIAHIDTIQSLAKVA--LEWNYTRPIVD--ESMDIAIKNGRHPVVER--Y 566
Query: 642 VNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDC 701
+F+PND I G++ F ++TGPNM GKST++RQV + ++AQ+GSFVP D A I V D
Sbjct: 567 TDFVPNDTN-ISGEARFIMLTGPNMAGKSTYMRQVALITILAQMGSFVPADYAKIGVVDR 625
Query: 702 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAIC 761
I+ RVGA D RG STFM EM+E A+IL AT+RSLI++DE+GRGTSTYDG +AW+I
Sbjct: 626 IYTRVGASDDITRGRSTFMMEMVELANILNTATERSLILLDEIGRGTSTYDGLAIAWSIT 685
Query: 762 EHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYK 821
EH+ +I+A T+FATH+H L L EN E V NYH++ + T L + K
Sbjct: 686 EHIHNKIKARTIFATHYHHLIEL--ENVLE-------NVRNYHIA--VKETPDGLVFVRK 734
Query: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS 881
V PG +S+GI VA+ A PE VV A+ +I ++ IEV R+ +
Sbjct: 735 VMPGGMSKSYGIEVAKLAGVPEDVVKRAK---------NVLEMIEEEKVIEVRRGRRIV- 784
Query: 882 DPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKD 922
M G + + L+E ++ + M EAL ++ +K+
Sbjct: 785 --QTMLFGNSNCDEILEELKNLDIMNMTPLEALNKLNELKN 823
>gi|409387689|ref|ZP_11239869.1| DNA mismatch repair protein MutS [Lactococcus raffinolactis 4877]
gi|399205246|emb|CCK20784.1| DNA mismatch repair protein MutS [Lactococcus raffinolactis 4877]
Length = 853
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 318/597 (53%), Gaps = 64/597 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++ Y + ++ +D+A+ ++L++L++ K+ SL+ L++ T TA MG R+L W+ +PL
Sbjct: 249 VQHYEIKDFLLMDAASKKSLDLLQNARTGKKHGSLYWLLDETKTA-MGTRMLRFWIDRPL 307
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ V+ I RL I+Q F+D R DL + LK + DIERL + +A + +++L +
Sbjct: 308 VSVSAIQKRLTIIQTFLDHFFERSDLTETLKGVYDIERLASRVSFGKANPKDLLQLANTL 367
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ---LENG 458
+P I+ L + + + + E+ LDP+ L + L+ +++D + + G
Sbjct: 368 SNVPAIKGVLTEMKADVLTQLIEQ-LDPMPDL---------LELITSAIDPNASATITEG 417
Query: 459 EYMISSSYDTGLSALK----------NEQESLERQIHSLHKQTASDLDLPVDKALKLDKG 508
+I + ++T L + E E+ ER+ ++ LK+D
Sbjct: 418 N-IIKNGFNTTLDEYRVIMRDGTTWIAELEAKERENSGINN-------------LKIDYN 463
Query: 509 TQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
+ G+ F +T R+++ F T K+ ++ L +L Q E + +
Sbjct: 464 KKDGYYFHVTNSN----REQVPDHFFRKATLKNSERYGTETLSRLESQMLDARENSASLE 519
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
+L +V TF + LA ++E+DVL S A +A + Y +PDI I+
Sbjct: 520 YDLFLQVRDQTETFIARIQKLAKTIAEIDVLQSLAVVAEN--NHYIQPDIIKNGQEIQII 577
Query: 629 EGSRHPCVE----AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
G RH VE AQ++V PN + ++ Q+ITGPNM GKST++R++ + ++M Q
Sbjct: 578 NG-RHAVVEKVMGAQEYV---PNSIEF-DAETMIQLITGPNMSGKSTYMRELALTVVMTQ 632
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+GSF+P ++ + + D IF R+GA D + G STFM EM+E ++ AT SLI+ DEL
Sbjct: 633 IGSFIPAEQVQLPIFDAIFTRIGAADDLISGQSTFMVEMMEANHAIRRATKNSLILFDEL 692
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGT+TYDG LA AI E++ E + A TLFATH+HEL L EN+ + + N H
Sbjct: 693 GRGTATYDGIALAQAIVEYIHEHVGAKTLFATHYHELVTL--ENS-------LQHLKNVH 743
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP 861
V+ + ++T L+K+EPG D+S+GIHVA+ A P ++ A+ +ELE TP
Sbjct: 744 VATL--EANGEVTFLHKIEPGPADKSYGIHVAKIAGLPSPLLKRAKVILSELEVDTP 798
>gi|448326836|ref|ZP_21516180.1| DNA mismatch repair protein MutS [Natronobacterium gregoryi SP2]
gi|445609887|gb|ELY63673.1| DNA mismatch repair protein MutS [Natronobacterium gregoryi SP2]
Length = 913
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 342/696 (49%), Gaps = 71/696 (10%)
Query: 260 ALGALLSYAELL-----------SDESNYGNY--YIRKYSLDSYMRLDSAAMRALNVLES 306
A GALL YAE DES Y ++ +Y Y+ LD+ A+R+L + E
Sbjct: 255 ACGALLEYAEYARGSESEAELEADDESARLEYITHLTRYDPREYLLLDAVALRSLELFEP 314
Query: 307 KTDANKN-FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ ++ +L G+++ T +A +G R L W+++PLL+ I ARLD V+ R+
Sbjct: 315 RAVHGRDEATLVGVLDETSSA-LGGRKLRDWIRRPLLEPARIEARLDAVEELQRSVRARE 373
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
L+ L + D+ERL+ + + RA + + L + +P +R+ L E
Sbjct: 374 KLQDLLWDVYDLERLIGRISRERANARDLCSLRATLAVVPDVRAHLAGSE---------- 423
Query: 426 YLDPLESLTDD-DHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESL 480
D L+ L D D L L+E S+ ++ E G +++ YD L AL+
Sbjct: 424 -CDRLQQLHADLDPLADIRELIEDSIVEDPPIEITEGG--IVAEGYDENLDALRQTARDG 480
Query: 481 ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK 540
++ I L ++ + +LK+ + G+ +T P + + + +T K
Sbjct: 481 KQWIDDLEERERERTGI---DSLKVGYNSVHGYYIEVTN---PNL-DSVPDDYQRRQTLK 533
Query: 541 DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLL 600
+ +F LK+ D+ E + EL V +T E ++LA L+ +D L+
Sbjct: 534 NSERFATPALKEREDEIVGAEERADELEYELFREVRKTVANEVERVQALADALATVDALV 593
Query: 601 SFADLASSCPTPYTRPDI-NPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQ 659
S A +A+ Y RP++ D ++ +EG RHP VE + +F+PND + G
Sbjct: 594 SLATVAAQYD--YCRPELLERGDDLEVEIEGGRHPVVE-RTQESFVPNDARFA-GDRRLA 649
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
+ITGPNM GKST++RQV +L+AQVGSFVP A ++ D IF RVGA D G STF
Sbjct: 650 VITGPNMSGKSTYMRQVAQIVLLAQVGSFVPARSARLTPVDRIFTRVGASDDIAGGRSTF 709
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M EM E A+IL+ A DRSL+++DE+GRGTST DG +A A+ EHL +E+ A TLFATH H
Sbjct: 710 MVEMDELATILREADDRSLVLLDEVGRGTSTADGLAIAQAMTEHLHDEVGATTLFATHHH 769
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
LT +A + + F + +D ++ ++V PGA S+G+ VA A
Sbjct: 770 PLTEVAEDLEDAFT-----------LHFEVDQEDGEVVFHHEVAPGAATGSYGVEVATAA 818
Query: 840 NFPESVVTLAREKAAELED-----------FTPSAVISDDAK-IEVGSKRKRISDPNDMS 887
PE VV +RE AE D TP S A E + R+ SD +S
Sbjct: 819 GVPEPVVARSRELVAETADERPDDSDSPAEATPKPTTSATADGGEQTAPRQSTSDAPGLS 878
Query: 888 RGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDD 923
A Q L+ P+E + L+R+KR+ +D
Sbjct: 879 SDVAAELQALEVAHMTPVEAL---AELDRLKRLLED 911
>gi|449129626|ref|ZP_21765856.1| DNA mismatch repair protein mutS [Treponema denticola SP37]
gi|448945674|gb|EMB26544.1| DNA mismatch repair protein mutS [Treponema denticola SP37]
Length = 884
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 320/647 (49%), Gaps = 60/647 (9%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E+ P G LL Y E +S I+ Y+ ++ LD + + L +L + D + ++
Sbjct: 235 EVPPA--GLLLQYLEEISGRDISHISGIKIYAESDFVSLDDSTRKNLELLTNLRDNSPSY 292
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SLF +N T TA MG RLL + PL EI+ RLD V + D +R+ L I
Sbjct: 293 SLFESVNYTKTA-MGTRLLRRRISYPLRSKKEIDKRLDKVNSLFKDGKASAIIRETLSSI 351
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
DIERL + ++ + ++ L QS + S ++ SLI+E+ L+ L+ L+
Sbjct: 352 LDIERLSGRIAMQKTHGKDLLALKQS------LNSVIK-----MGSLIQEKKLNFLQ-LS 399
Query: 435 DDDH--LNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHS 486
D++ L + L+E S+D D L +G+ + S DT + +N E LE+ +
Sbjct: 400 DEEKKLLTEIRNLLENSIDDDCTIALNDGKLIKKGFSKKVDTIKNIKENAHEILEKYLDD 459
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
K+T + LK+ G+ ++ + FI + + +FT
Sbjct: 460 ERKKTGIN-------NLKIKYNRMMGYFLEVSLGNISAV----PDYFIRQRSLSNADRFT 508
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK++ D E +KE+ + V + + LA ++ELDV SFA A
Sbjct: 509 TESLKQIEDNINNSEERLIEAEKEVFDEVCTEIASHHCFLQKLAEEVAELDVNQSFAQAA 568
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSW-------- 657
+TRP++ D G + + G RHP VE +F+PN KL+ G++
Sbjct: 569 --VLHAWTRPEL-CGDSGILNITGGRHPVVENHLRAGDFVPNSIKLLSGENTNSEDETIP 625
Query: 658 -FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKSTF+RQ + L+AQ+GSFVP ++A +S D IF RVGA D RG
Sbjct: 626 SFAVITGPNMAGKSTFLRQTALICLLAQIGSFVPAEKAVLSPVDKIFCRVGATDNLARGE 685
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STF+ EM+ETA IL AT SL+I+DE+GRGTS DG +A A+ EHL+ I+A TLFAT
Sbjct: 686 STFLVEMIETAYILNSATRNSLVIMDEVGRGTSMEDGLAIAQAVSEHLLNTIKAKTLFAT 745
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L HE ++ + K+ L KV PGA S+GIHVA
Sbjct: 746 HYHELTRLEHEKI-------------INLKLDVLEAEGKIVFLKKVVPGAAGNSYGIHVA 792
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
A P+SV+T A F I + + GS+ K S P
Sbjct: 793 GLAGIPQSVLTRAENLLYMRSQFQKERTIQEASSSAQGSEEKTPSSP 839
>gi|18310137|ref|NP_562071.1| DNA mismatch repair protein MutS [Clostridium perfringens str. 13]
gi|44888232|sp|Q8XL87.1|MUTS_CLOPE RecName: Full=DNA mismatch repair protein MutS
gi|18144816|dbj|BAB80861.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 909
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 318/582 (54%), Gaps = 39/582 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ + E SSL++ Y L+ L D L+E S+ D L++G
Sbjct: 371 GKIPNVKGII---ENCTSSLLR-NYHHNLDDLRD------IYELLEKSIKEDPSLTLKDG 420
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ +I +++ + L+ + + + I SL + + + K+LK+ FG+ I+
Sbjct: 421 D-LIKDGFNSEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIEIS 476
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 477 KANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNE 533
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP VE
Sbjct: 534 VENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVVEK 589
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+IS
Sbjct: 590 VIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANIS 649
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
V D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG +A
Sbjct: 650 VVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIA 709
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
W++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 710 WSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVDNN 758
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E +LE
Sbjct: 759 IIFLRKIIEGGADQSYGIEVAKLAGIPDDVINRAKEILEKLE 800
>gi|423522400|ref|ZP_17498873.1| DNA mismatch repair protein mutS [Bacillus cereus HuA4-10]
gi|401175094|gb|EJQ82297.1| DNA mismatch repair protein mutS [Bacillus cereus HuA4-10]
Length = 899
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KIGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L EN ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EENLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
ES++ A+E A+LE
Sbjct: 776 ESLIARAKEVLAQLE 790
>gi|423592288|ref|ZP_17568319.1| DNA mismatch repair protein mutS [Bacillus cereus VD048]
gi|401230530|gb|EJR37037.1| DNA mismatch repair protein mutS [Bacillus cereus VD048]
Length = 890
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 335/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
ES++ A+E A+LE
Sbjct: 776 ESLIARAKEVLAQLE 790
>gi|423367756|ref|ZP_17345188.1| DNA mismatch repair protein mutS [Bacillus cereus VD142]
gi|401083409|gb|EJP91667.1| DNA mismatch repair protein mutS [Bacillus cereus VD142]
Length = 890
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 208/661 (31%), Positives = 348/661 (52%), Gaps = 77/661 (11%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L + + + N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VLE---------ESLGQLKNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE----------------DFTPSAVISDDAKIEVGSKRKRISDPNDM 886
ES++ A+E A+LE + P V+ + E+ K++ + + +
Sbjct: 776 ESLIARAKEVLAQLEGQEEIVIPKRVEVKVPEVAPEPVVVKEEPAEIQEKKEETEEDSQL 835
Query: 887 S 887
S
Sbjct: 836 S 836
>gi|389847474|ref|YP_006349713.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
gi|388244780|gb|AFK19726.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
Length = 954
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 199/612 (32%), Positives = 313/612 (51%), Gaps = 61/612 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLF 317
A+GALL+YAE +S Y R D +++LD+ A+++L + +S++ +LF
Sbjct: 283 AVGALLAYAEYAQGDSKL-EYVTRVTRFDPREFLQLDATAIQSLELFDSRS-TRAGSTLF 340
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
+++ T A +G+R L WL++PL+D I ARLD V A DD R DLR HL + D+
Sbjct: 341 SVLDETACA-LGRRRLEAWLRRPLVDREAIEARLDAVDALCDDALSRADLRDHLSSVYDL 399
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + + RA + + L + R+P IR +L + + S +++ LD LE + D
Sbjct: 400 ERLVARVSRERANARDLRSLKTTLDRVPEIRESLAETDSALLSKLRDS-LDELECVRD-- 456
Query: 438 HLNKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
LV ++ D E G +I+ ++ L L+ E + +L Q
Sbjct: 457 -------LVGRAIVTDPPQEITEGG--VIADGFNAELDDLRGTAEDGREWVSNLEVQERE 507
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ +L++ G+ +T P + ++ ++ +T K+ +F +LK+
Sbjct: 508 RTGI---DSLEVGYNQVHGYYIEVTN---PNL-DRVPDDYVRRQTLKNSERFYTPELKER 560
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
D+ + + + +L V T SE +++A +L++LDVL + AD+A + Y
Sbjct: 561 EDEILRAADRADALEYDLFCEVRADVATESERIQAVADVLADLDVLRTLADVAVA--NDY 618
Query: 614 TRPDINPPDVGD-------------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQI 660
RP+ + G I ++ RHP VE F+PN + +G +
Sbjct: 619 ARPEFHGGSAGGGENTSNAKFDGEGIEIDAGRHPVVERAQG-EFVPNPASIPQG--GVAL 675
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQV + ++AQ+GSFVP D A + V D +F R+GA D G STFM
Sbjct: 676 ITGPNMSGKSTYMRQVALVCILAQMGSFVPADAARLPVVDRVFTRIGASDDIAGGQSTFM 735
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
+EM E IL ATD SL+++DE+GRGTST DG +A A E + +E+ A TLFATH+H+
Sbjct: 736 REMSELTEILHNATDDSLVLLDEVGRGTSTADGLAIARAATEFVHDEVGAMTLFATHYHD 795
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSR--KLTMLYKVEPGACDQSFGIHVAEF 838
LT A + FN H +T R ++T L+ V G S+G+ VA
Sbjct: 796 LTDAAADRDGVFNL-------------HFTATQRDGEVTFLHSVADGPSSSSYGVEVAHL 842
Query: 839 ANFPESVVTLAR 850
A P +VV AR
Sbjct: 843 AGVPSTVVDRAR 854
>gi|422760023|ref|ZP_16813785.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412858|gb|EFY03766.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 851
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 226/737 (30%), Positives = 359/737 (48%), Gaps = 84/737 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+G GL Y+D++ + + D FT+V S + L KE LL + + +
Sbjct: 134 DGFRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDLSEEEQM----- 185
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 186 ILVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ FSS Y+D L + D D L + L+ T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FSS----PYIDKL--VNDIDSLPELEYLIRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLV----PDHFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ R+ T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESASLEYDIFMRIRTQVETYINRLQKLAKNLATIDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITIQEGRHAVVEKVMGVKEYIPNSISFDQETS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D ++ + D IF R+GA D + G STFM EM+E +K A++
Sbjct: 616 ALTVIMAQMGSFVAADHVNLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASEN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI EH+ + I A T+FATH+HELT E +TK
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEHIHDRIGAKTMFATHYHELT--------ELSTK- 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV +T L+K+ G D+S+GIHVA+ A PES++ A
Sbjct: 727 LTRLINVHVETL--EKGGDVTFLHKIAQGPADKSYGIHVAKIAGLPESLLNRADTVLTRF 784
Query: 857 EDFTPSA-VISDDAKIE 872
E +PS +ISD ++E
Sbjct: 785 EAQSPSTDLISDSLRVE 801
>gi|423518406|ref|ZP_17494887.1| DNA mismatch repair protein mutS [Bacillus cereus HuA2-4]
gi|401161133|gb|EJQ68501.1| DNA mismatch repair protein mutS [Bacillus cereus HuA2-4]
Length = 890
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 335/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKSNLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
ES++ A+E A+LE
Sbjct: 776 ESLIARAKEVLAQLE 790
>gi|407781129|ref|ZP_11128349.1| DNA mismatch repair protein MutS [Oceanibaculum indicum P24]
gi|407208555|gb|EKE78473.1| DNA mismatch repair protein MutS [Oceanibaculum indicum P24]
Length = 873
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 246/782 (31%), Positives = 368/782 (47%), Gaps = 64/782 (8%)
Query: 155 IGLGYVDLTKRVLGLAEF-LDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
+G+ +VD++ EF + +V + L L +E LLP ++ + L +A
Sbjct: 136 LGIAWVDMST-----GEFQVQPLEEKSVAAVLARLDPQELLLPDRLLQR---EALFEAFA 187
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAP-GALGALLSYAELLS 272
++T + + F D V RL+ D FE A A GAL+ Y EL
Sbjct: 188 DWKQVMTPQPGSRF---DSVAGEKRLMALYEVQALDSFGSFERAELAAAGALVDYVELTQ 244
Query: 273 DESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRL 332
R+ + M +D+A R+L + ++T K SL +++RT T G G RL
Sbjct: 245 KGKLPRLSAPRRLQAGAVMEIDAATRRSLELTRTQTGERKG-SLLSVIDRTVT-GAGARL 302
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQ 392
L WL PL DV I RLD VQ F D LR LR+ L+R D+ER + L R G +
Sbjct: 303 LAAWLSAPLTDVPAIEDRLDRVQFFFDQEGLRGKLRETLRRCPDVERALTRLTLDRGGPR 362
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD--DHLNKFIALVET-- 448
L IR AL + L L PL D L + ALV+
Sbjct: 363 D----------LAAIRDALAE-SAVLRDLAGAPSLAPLPKGISQALDDLGRHGALVDRLG 411
Query: 449 ---SVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKL 505
+ DL L I+ Y L L+ ++ R I L + + + +LK+
Sbjct: 412 RALAPDLPVLTRDGGFIAPGYAPELDQLRMLRDESRRLIAGLQARYQQETGV---SSLKI 468
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
G+ ++ K+ FI +T V+FT +L +L + ++
Sbjct: 469 KHNNVLGYFIEVSTSHGDKLLAH--EDFIHRQTMASAVRFTTVELGELEQKLSSAADKAL 526
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ L ++ ++ A ++ LDV + A+LA+ Y RP+ + +
Sbjct: 527 AVELALFRDLVGEVTAHADAIALAANAIARLDVASALAELATD--NRYVRPETT--EGTE 582
Query: 626 IILEGSRHPCVEAQDWV---NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
+ G RHP VEA F+ NDC L GK + ++TGPNM GKSTF+RQ + ++
Sbjct: 583 FAIAGGRHPVVEAALQAAGERFVGNDCVLEGGKRLW-LLTGPNMAGKSTFLRQNALIAIL 641
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQ+G FVP A I V D +F+RVGA D RG STFM EM+ETA+IL A RSL+I+D
Sbjct: 642 AQIGGFVPAGSARIGVVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGPRSLVILD 701
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
E+GRGT+TYDG +AWA EHL R TLFATH+HELT LA + N +A
Sbjct: 702 EIGRGTATYDGLSIAWATVEHLHAVNRCRTLFATHYHELTQLAEKLEN---------LAC 752
Query: 803 YHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR---EKAAELEDF 859
+ + + ++ L++V GA D+S+GIHVA+ A P VV A +K E E
Sbjct: 753 H--TMRVKEWQDEIVFLHEVAAGAADRSYGIHVAKLAGLPAPVVARAESVLKKLEEGETG 810
Query: 860 TPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKR 919
SA IS+D + ++ ++ P + G + A L +D+ + + ++AL+ + R
Sbjct: 811 ATSARISEDLPLFAAMVQRPVAAPAQPT-GPSPAEAAL---ADINPDELTPRQALDALYR 866
Query: 920 MK 921
+K
Sbjct: 867 LK 868
>gi|340354919|ref|ZP_08677615.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
gi|339622933|gb|EGQ27444.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
Length = 855
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 301/572 (52%), Gaps = 35/572 (6%)
Query: 281 YIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQP 340
YI K D+ + +D+ +MR L ++++ K +LF +++ T TA MG R L MW+ QP
Sbjct: 245 YIEK---DAKLSIDANSMRNLELVQTIRSGKKEGTLFWVLDETVTA-MGARKLRMWIHQP 300
Query: 341 LLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQS 400
L I RL+ V VD+ LR++L + LK + D+ERL + A + + +L S
Sbjct: 301 LAQRKAIEERLETVSNLVDEFFLREELVEELKNVYDLERLAGRISMGSASARDLAQLRNS 360
Query: 401 SIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
+P ++ L + + I ++ +DP E D + + L E G
Sbjct: 361 LTHIPKLQKILSESKRPMLQQIADK-MDPCE-----DTYQLLADAIAENPPLTSKEGG-- 412
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+I Y+ L L++ + + + L ++ + K LK+ FG+ ITK
Sbjct: 413 LIKDGYNEKLDQLRDASRNGKSWLAQLEQKERQATGI---KTLKIGYNRIFGYYIEITKS 469
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ T++ +T + ++ T+LK+ + + + + L + +
Sbjct: 470 ---NVHLADLTRYERKQTLANAERYITTELKEKEELILNAEADGQILETNLFLAIREQVK 526
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ- 639
+ + LA+++SELDVLL+FA ++ Y RP+ + DI + RHP VE
Sbjct: 527 EEVQRIQKLASVVSELDVLLAFAVVSER--NRYIRPEFHNGRALDI--QNGRHPVVEKMM 582
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
+ +IPN C+L + +ITGPNM GKSTF+RQV + ++MAQ+G FVPC++A + +
Sbjct: 583 NHSLYIPNSCELADYSNML-LITGPNMSGKSTFMRQVALTVVMAQIGCFVPCEKAVLPIT 641
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D G STFM EM+E+ L AT RSL++ DE+GRGTSTYDG LA A
Sbjct: 642 DQIFTRIGAADDVASGQSTFMMEMMESQYALAHATSRSLLLFDEIGRGTSTYDGMALAQA 701
Query: 760 ICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTML 819
+ EH+ E++ A TLF+TH+HELT L + + N HV+A + K+ L
Sbjct: 702 MMEHIHEQVGANTLFSTHYHELTKL---------EDVLARLLNVHVAA--KEQNGKVVFL 750
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
+KV PGA D+S+GIHVAE A P +V A++
Sbjct: 751 HKVLPGAADRSYGIHVAELAGLPAELVERAKK 782
>gi|218232426|ref|YP_002368572.1| DNA mismatch repair protein MutS [Bacillus cereus B4264]
gi|226723052|sp|B7HDP4.1|MUTS_BACC4 RecName: Full=DNA mismatch repair protein MutS
gi|218160383|gb|ACK60375.1| DNA mismatch repair protein MutS [Bacillus cereus B4264]
Length = 890
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|429192989|ref|YP_007178667.1| DNA mismatch repair protein MutS [Natronobacterium gregoryi SP2]
gi|429137207|gb|AFZ74218.1| DNA mismatch repair protein MutS [Natronobacterium gregoryi SP2]
Length = 896
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 342/696 (49%), Gaps = 71/696 (10%)
Query: 260 ALGALLSYAELL-----------SDESNYGNY--YIRKYSLDSYMRLDSAAMRALNVLES 306
A GALL YAE DES Y ++ +Y Y+ LD+ A+R+L + E
Sbjct: 238 ACGALLEYAEYARGSESEAELEADDESARLEYITHLTRYDPREYLLLDAVALRSLELFEP 297
Query: 307 KTDANKN-FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ ++ +L G+++ T +A +G R L W+++PLL+ I ARLD V+ R+
Sbjct: 298 RAVHGRDEATLVGVLDETSSA-LGGRKLRDWIRRPLLEPARIEARLDAVEELQRSVRARE 356
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
L+ L + D+ERL+ + + RA + + L + +P +R+ L E
Sbjct: 357 KLQDLLWDVYDLERLIGRISRERANARDLCSLRATLAVVPDVRAHLAGSE---------- 406
Query: 426 YLDPLESLTDD-DHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESL 480
D L+ L D D L L+E S+ ++ E G +++ YD L AL+
Sbjct: 407 -CDRLQQLHADLDPLADIRELIEDSIVEDPPIEITEGG--IVAEGYDENLDALRQTARDG 463
Query: 481 ERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK 540
++ I L ++ + +LK+ + G+ +T P + + + +T K
Sbjct: 464 KQWIDDLEERERERTGI---DSLKVGYNSVHGYYIEVTN---PNL-DSVPDDYQRRQTLK 516
Query: 541 DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLL 600
+ +F LK+ D+ E + EL V +T E ++LA L+ +D L+
Sbjct: 517 NSERFATPALKEREDEIVGAEERADELEYELFREVRKTVANEVERVQALADALATVDALV 576
Query: 601 SFADLASSCPTPYTRPDI-NPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQ 659
S A +A+ Y RP++ D ++ +EG RHP VE + +F+PND + G
Sbjct: 577 SLATVAAQYD--YCRPELLERGDDLEVEIEGGRHPVVE-RTQESFVPNDARFA-GDRRLA 632
Query: 660 IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTF 719
+ITGPNM GKST++RQV +L+AQVGSFVP A ++ D IF RVGA D G STF
Sbjct: 633 VITGPNMSGKSTYMRQVAQIVLLAQVGSFVPARSARLTPVDRIFTRVGASDDIAGGRSTF 692
Query: 720 MQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFH 779
M EM E A+IL+ A DRSL+++DE+GRGTST DG +A A+ EHL +E+ A TLFATH H
Sbjct: 693 MVEMDELATILREADDRSLVLLDEVGRGTSTADGLAIAQAMTEHLHDEVGATTLFATHHH 752
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
LT +A + + F + +D ++ ++V PGA S+G+ VA A
Sbjct: 753 PLTEVAEDLEDAFT-----------LHFEVDQEDGEVVFHHEVAPGAATGSYGVEVATAA 801
Query: 840 NFPESVVTLAREKAAELED-----------FTPSAVISDDAK-IEVGSKRKRISDPNDMS 887
PE VV +RE AE D TP S A E + R+ SD +S
Sbjct: 802 GVPEPVVARSRELVAETADERPDDSDSPAEATPKPTTSATADGGEQTAPRQSTSDAPGLS 861
Query: 888 RGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDD 923
A Q L+ P+E + L+R+KR+ +D
Sbjct: 862 SDVAAELQALEVAHMTPVEAL---AELDRLKRLLED 894
>gi|229140410|ref|ZP_04268965.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST26]
gi|228642971|gb|EEK99247.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST26]
Length = 886
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++T A+E A+LE
Sbjct: 770 DSLITRAKEVLAQLE 784
>gi|423669345|ref|ZP_17644374.1| DNA mismatch repair protein mutS [Bacillus cereus VDM034]
gi|423674527|ref|ZP_17649466.1| DNA mismatch repair protein mutS [Bacillus cereus VDM062]
gi|401298472|gb|EJS04072.1| DNA mismatch repair protein mutS [Bacillus cereus VDM034]
gi|401310078|gb|EJS15411.1| DNA mismatch repair protein mutS [Bacillus cereus VDM062]
Length = 890
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 335/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
ES++ A+E A+LE
Sbjct: 776 ESLIARAKEVLAQLE 790
>gi|168211840|ref|ZP_02637465.1| DNA mismatch repair protein MutS [Clostridium perfringens B str.
ATCC 3626]
gi|170710211|gb|EDT22393.1| DNA mismatch repair protein MutS [Clostridium perfringens B str.
ATCC 3626]
Length = 895
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 317/582 (54%), Gaps = 39/582 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ + E SSL+K Y L+ L D L+E S+ D L++G
Sbjct: 371 GKIPNVKGII---ENCTSSLLK-NYHHNLDDLRD------IYELLEKSIKEDPSLTLKDG 420
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ +I +++ + L+ + + + I SL + + + K+LK+ FG+ I+
Sbjct: 421 D-LIKDGFNSEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIEIS 476
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 477 KANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNE 533
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP VE
Sbjct: 534 VENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVVEK 589
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+IS
Sbjct: 590 VIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANIS 649
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
+ D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG +A
Sbjct: 650 IVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIA 709
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
W++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 710 WSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVDNN 758
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E LE
Sbjct: 759 IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILETLE 800
>gi|313672389|ref|YP_004050500.1| DNA mismatch repair protein muts [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939145|gb|ADR18337.1| DNA mismatch repair protein MutS [Calditerrivibrio nitroreducens
DSM 19672]
Length = 850
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 207/649 (31%), Positives = 327/649 (50%), Gaps = 52/649 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
++ D+ + +D+ A++ L V+ES +D + SLF ++N C MG+RLL +L P
Sbjct: 245 FTFDNTLYMDAVAIKTLEVVES-SDPSGRTSLFDVLN-FCKTAMGERLLKFYLLTPTRLK 302
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
EI R + + FV+++ L L + L I+DIER++ + ++ + ++ L S +L
Sbjct: 303 FEILRRQEWITFFVNNSDLIDSLSKILSEINDIERIITRISAKKGSPRDLIGLKNSLKQL 362
Query: 405 P--------YIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE 456
P Y+ LQ + F L K+ Y +++DD LN D ++
Sbjct: 363 PQIKKILKGYVSPILQDFIKNFDDL-KDIYQLIDHAISDDPPLN--------IKDCGVIK 413
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
+G S+ D S KN Q SL +I + K+ LK+ FG+
Sbjct: 414 DG---YSTEVDELRSIRKNSQ-SLLLKIENEEKEKTGI------STLKVRYNKVFGYYIE 463
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
I+K + K+ + +T + +F +LKKL ++ E + + E+ ++
Sbjct: 464 ISKGQVGKVPDYYERR----QTLVNAERFITPELKKLEEKILTAEERLQELEYEIFCQIR 519
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ + + +A M++E+D +S A A Y RP++ D +I + RHP +
Sbjct: 520 DGVSSNASRIRYVAQMVAEIDFFISSAYCA--IKYNYVRPEVG--DFEEIKIIDGRHPVI 575
Query: 637 EAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASI 696
E + F+PND L K+ IITGPNM GKST++R V V LMA G FVP A I
Sbjct: 576 ERRVKEGFVPNDVLLDGTKNRLMIITGPNMSGKSTYLRTVAVITLMAHCGLFVPAREAKI 635
Query: 697 SVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGL 756
D IF RVGA D RG STFM EMLETA+I+K AT +SLII+DE+GRGTST+DG +
Sbjct: 636 GFVDRIFTRVGASDNLARGESTFMVEMLETANIIKNATQKSLIILDEIGRGTSTFDGLSI 695
Query: 757 AWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
AW++ E++ E ++A TLFATH+HELT L + GV NY +A + ++
Sbjct: 696 AWSVAEYIAERVKAKTLFATHYHELTELES---------MVAGVKNY--TALVKEWKNEI 744
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSK 876
+ K+ G D+S+GI+VA+ A PE++V+ A E + LE IS D + K
Sbjct: 745 IFMRKITEGVADKSYGIYVAKLAGLPEAIVSRAEEVLSILEKHE----ISIDGSFMMTKK 800
Query: 877 RKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLE 925
++ H + E + + + KEAL+ R+++ L+
Sbjct: 801 KRSYERTVIQPMLLFEEHPIISELKGINPDELSPKEALDLFYRIREKLD 849
>gi|448617252|ref|ZP_21665907.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
gi|445748601|gb|EMA00048.1| DNA mismatch repair protein MutS [Haloferax mediterranei ATCC
33500]
Length = 919
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 199/612 (32%), Positives = 313/612 (51%), Gaps = 61/612 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLF 317
A+GALL+YAE +S Y R D +++LD+ A+++L + +S++ +LF
Sbjct: 248 AVGALLAYAEYAQGDSKL-EYVTRVTRFDPREFLQLDATAIQSLELFDSRS-TRAGSTLF 305
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
+++ T A +G+R L WL++PL+D I ARLD V A DD R DLR HL + D+
Sbjct: 306 SVLDETACA-LGRRRLEAWLRRPLVDREAIEARLDAVDALCDDALSRADLRDHLSSVYDL 364
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + + RA + + L + R+P IR +L + + S +++ LD LE + D
Sbjct: 365 ERLVARVSRERANARDLRSLKTTLDRVPEIRESLAETDSALLSKLRDS-LDELECVRD-- 421
Query: 438 HLNKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
LV ++ D E G +I+ ++ L L+ E + +L Q
Sbjct: 422 -------LVGRAIVTDPPQEITEGG--VIADGFNAELDDLRGTAEDGREWVSNLEVQERE 472
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ +L++ G+ +T P + ++ ++ +T K+ +F +LK+
Sbjct: 473 RTGI---DSLEVGYNQVHGYYIEVTN---PNL-DRVPDDYVRRQTLKNSERFYTPELKER 525
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
D+ + + + +L V T SE +++A +L++LDVL + AD+A + Y
Sbjct: 526 EDEILRAADRADALEYDLFCEVRADVATESERIQAVADVLADLDVLRTLADVAVA--NDY 583
Query: 614 TRPDINPPDVGD-------------IILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQI 660
RP+ + G I ++ RHP VE F+PN + +G +
Sbjct: 584 ARPEFHGGSAGGGENTSNAKFDGEGIEIDAGRHPVVERAQG-EFVPNPASIPQG--GVAL 640
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQV + ++AQ+GSFVP D A + V D +F R+GA D G STFM
Sbjct: 641 ITGPNMSGKSTYMRQVALVCILAQMGSFVPADAARLPVVDRVFTRIGASDDIAGGQSTFM 700
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
+EM E IL ATD SL+++DE+GRGTST DG +A A E + +E+ A TLFATH+H+
Sbjct: 701 REMSELTEILHNATDDSLVLLDEVGRGTSTADGLAIARAATEFVHDEVGAMTLFATHYHD 760
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSR--KLTMLYKVEPGACDQSFGIHVAEF 838
LT A + FN H +T R ++T L+ V G S+G+ VA
Sbjct: 761 LTDAAADRDGVFNL-------------HFTATQRDGEVTFLHSVADGPSSSSYGVEVAHL 807
Query: 839 ANFPESVVTLAR 850
A P +VV AR
Sbjct: 808 AGVPSTVVDRAR 819
>gi|163941457|ref|YP_001646341.1| DNA mismatch repair protein MutS [Bacillus weihenstephanensis
KBAB4]
gi|229486459|sp|A9VS13.1|MUTS_BACWK RecName: Full=DNA mismatch repair protein MutS
gi|163863654|gb|ABY44713.1| DNA mismatch repair protein MutS [Bacillus weihenstephanensis
KBAB4]
Length = 890
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 335/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
ES++ A+E A+LE
Sbjct: 776 ESLIARAKEVLAQLE 790
>gi|423469982|ref|ZP_17446726.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6O-2]
gi|402437234|gb|EJV69258.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6O-2]
Length = 887
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 335/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ ARL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEARLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|443311537|ref|ZP_21041164.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 7509]
gi|442778416|gb|ELR88682.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 7509]
Length = 867
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 228/736 (30%), Positives = 359/736 (48%), Gaps = 74/736 (10%)
Query: 156 GLGYVDLTKRVLGLAEFL--DDSHFTNVESALVALGCKECLLPTEAV----------KSS 203
GL Y D++ EFL S ++ L+ L E L PT A KS+
Sbjct: 170 GLAYADIST-----GEFLTTQSSSLEHLTQELMRLQPSEVLFPTNAPDLGSLLRPGEKSA 224
Query: 204 ECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL-- 261
+ + + C + ++ T + R + L R S+E V G E P A+
Sbjct: 225 HLPSCLPS-SFCYALRSQNPFTLAEARSRL--LQRFRMRSLEGV-----GLEHLPLAVRA 276
Query: 262 -GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLM 320
G LL Y E E+ +R Y+L ++ +DS + R L + ++ D + SL +
Sbjct: 277 AGGLLEYLEATQKENPVALQLLRTYTLTDFLIVDSQSRRNLEITQTVRDGILHGSLLWAI 336
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERL 380
++T TA MG R L W QPLLD+ I +R D +Q V+DT+LR DLRQ L++I D+ERL
Sbjct: 337 DKTSTA-MGGRALRRWFLQPLLDIKGIKSRQDTIQELVEDTSLRHDLRQLLRQIYDLERL 395
Query: 381 MHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP-LESLTDD--D 437
A + +V L S +RLP I ++ + + +++ + P LE L +
Sbjct: 396 TGRASSGSANARDLVSLADSLLRLPEIARLVENAQSPYLKALQK--VPPILEQLGHQIRN 453
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
HL + L T E G +I S ++ L L+ E + I +L + + +
Sbjct: 454 HLVESPPLYLT-------EGG--LIRSGINSQLDELRITVEQDKLWIANLEVKEKARTGI 504
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
P LK+ FG+ I++ ++ +I +T + ++ LK+ +
Sbjct: 505 P---NLKVGFNKTFGYYISISRSRADQV----PDNYIRKQTLTNEERYITPDLKEKEARI 557
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
++ + E+ + + Q +EI ++ + ++ DVL FA++A Y RP
Sbjct: 558 LTAKDDLNRLEYEVFSLLRQEVGESAEIIRNTSRAVAAADVLCGFAEVA--VYQGYCRPQ 615
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVNF-IPNDCKL--------IRGKSWFQIITGPNMGG 668
+ + +II+ RHP VE F +PN L K I+TGPN G
Sbjct: 616 MV--EGREIIIIDGRHPVVEQSLPSGFFVPNSTMLGWEENSPDTLEKPDLVILTGPNASG 673
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KS ++RQ+G+ LMAQVG FVP A + + D IF RVGA D G STFM EM ETA+
Sbjct: 674 KSCYLRQLGLIQLMAQVGCFVPAKEAILGICDRIFTRVGAVDDLATGQSTFMVEMNETAN 733
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL AT +SL+++DE+GRGT+T+DG +AWA+ E+L +EI++ T+FATH+HE+ LA
Sbjct: 734 ILNHATSKSLVLLDEIGRGTATFDGLSIAWAVAEYLAQEIKSRTIFATHYHEMNELA--- 790
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
M VANY V+ + ++ L++V+PG D+S+GI A P V+
Sbjct: 791 ------SMMPNVANYQVT--VKELPDQIIFLHQVQPGGADKSYGIEAGRLAGLPSVVIGR 842
Query: 849 AREKAAELEDFTPSAV 864
A+E ++E + A+
Sbjct: 843 AKEVMGQIEKHSKIAI 858
>gi|188586122|ref|YP_001917667.1| DNA mismatch repair protein MutS [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350809|gb|ACB85079.1| DNA mismatch repair protein MutS [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 869
Score = 286 bits (731), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 210/658 (31%), Positives = 338/658 (51%), Gaps = 67/658 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
++ YS +SY+ +DS + L + E+ K SL ++++T TA MG R+L W++ PL
Sbjct: 263 VKPYSTESYLVMDSNTRKNLELCETIRQQRKEGSLLWVLDKTLTA-MGGRMLRNWIQHPL 321
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
L+V+ IN RL V+ F++ R++L + LK + D+ER++ + RA + ++ L S
Sbjct: 322 LNVDAINHRLQAVEFFLN-FMYREELARTLKNVYDLERVLGKIIYDRATPKDLIALSNSL 380
Query: 402 IRLPYIRSALQQYE-GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ----LE 456
LP ++ L+ E G + L +D L L D + L+ +++ D E
Sbjct: 381 EILPDVKDLLKNDEDGTLNDL-----MDRLPDLMD------LVELINSAIVPDPPATVKE 429
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
G +I +D L +K+ + I +L + + K+LK+ FG+
Sbjct: 430 GG--IIKDGFDEELDKIKDLSRGGKEWIANLEAKEKERTGI---KSLKVRYNKVFGYYIE 484
Query: 517 ITKKE-----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKEL 571
+TKK E IRK +T + +F LK+ D+ K EE + + ++
Sbjct: 485 VTKKNLDLVPEDYIRK---------QTLVNAERFVTPDLKEYEDKILKAEEEMTDLEYKI 535
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGS 631
++ ++ + + A +L+ELD S A AS+ + P ++ D+ DI +
Sbjct: 536 FQKIRSEVISRIKEIQEAAKILAELDCYRSLA--ASAAEYDFVPPQVDNSDIIDI--KEG 591
Query: 632 RHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
RHP VE F+PND L G +ITGPNM GKST++RQV + I+MAQ+GS+VP
Sbjct: 592 RHPVVERVSQEEPFVPNDTYLDNGTEQIALITGPNMAGKSTYMRQVALIIVMAQMGSYVP 651
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
A I + D IF RVGA D + G STFM EM E A+IL AT S +I+DE+GRGTST
Sbjct: 652 ATSARIGIVDKIFTRVGAADDLVSGQSTFMVEMNEVANILNNATSNSFVILDEIGRGTST 711
Query: 751 YDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
+DG +A A+ E+L +E + TLFATHFHEL LA E A V NY VS
Sbjct: 712 FDGISIARAVVEYLHQEDKVACKTLFATHFHELIELADEFAR---------VVNYSVS-- 760
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDD 868
+ + L ++E G D+S+G+ VA A P V+ A+E + LE S +
Sbjct: 761 VKEEGDDMIFLREIEKGGTDRSYGVQVARLAGIPRKVIGRAKEILSYLE--------SRE 812
Query: 869 AKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEK 926
E+ +++ +D+S A ++ ++E +++ + + K+AL+++ + D +K
Sbjct: 813 TNTEIPMTGYQVT-LDDLS---AEKNKLIQELNNINPDELSPKDALDKIYELYDKAQK 866
>gi|402312017|ref|ZP_10830947.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium ICM7]
gi|400370678|gb|EJP23660.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium ICM7]
Length = 882
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 226/738 (30%), Positives = 373/738 (50%), Gaps = 60/738 (8%)
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDR-LVRGSVEPVRDLVSGFEIAPGALGALL 265
+L + + + +T T F ++ + L R S+E + +S F A + GA+L
Sbjct: 183 SLEELKKKYNITITSLDNTYFSEKNSIDILKRHFAVSSIEALG--LSEFLDATISSGAML 240
Query: 266 SYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCT 325
Y + S I Y YM +D+++ R L ++E+ + KN SL G++++T T
Sbjct: 241 RYLYEMQKSSCAQIVGISAYKNGDYMIVDTSSRRNLELVETMREKKKNGSLLGVLDKTNT 300
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLE 385
A MG R+L +L+QPL++ I R + V D R++LR++L I D+ERLM +
Sbjct: 301 A-MGARMLRGFLEQPLVNKERIINRQEAVAELFDRYIDREELREYLNPIYDLERLMSRVV 359
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIAL 445
+ A + ++ L S + I+ L+ +E S IK+ + + D L I +
Sbjct: 360 TKNANTRDLLSLSASMKMISPIKEVLKTFE---SEEIKK-------TNNNLDRLEDIIDI 409
Query: 446 VETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA 502
++ +++ D L+ G +I++ Y+ + L+ + + + SL + + K
Sbjct: 410 IDRAINEDSPLSLKEGN-IINTGYNNEIDKLRQAKTEGKNWLASLESEEKEKTGI---KN 465
Query: 503 LKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLE 562
LK+ FG+ F +T + + FI +T + ++T KLK L + +
Sbjct: 466 LKVKFNKVFGYYFEVTNS----FKDMVPDYFIRKQTLTNAERYTTDKLKDLENIILGAED 521
Query: 563 EYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPD 622
+ + + E+ + +S A ++ +D + S A +A + Y +P+IN
Sbjct: 522 KLNSLEYEVFVEIRDEIAKNVNRIQSSAKAVAYIDAICSLATVAYN--NNYVKPEINTTG 579
Query: 623 VGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
+ DI + RHP VE + +FI ND L + K IITGPNM GKST++RQ + +
Sbjct: 580 IIDI--KDGRHPVVETMLNDDSFIANDTYLDQNKKRMSIITGPNMAGKSTYMRQTALICM 637
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+GSFVP +A++ V D IF RVGA D G STFM EM E A+IL+ AT SL+I+
Sbjct: 638 MAQIGSFVPAKQANLCVCDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRNSLVIL 697
Query: 742 DELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
DE+GRGTST+DG +AWA+ EH+ ++ I A TLFATH+HEL+ L + G
Sbjct: 698 DEIGRGTSTFDGLAIAWAVVEHISNIKLIGAKTLFATHYHELSELEG---------TLPG 748
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 859
V NY +S + + L K+ G D+S+GI VA+ A P+SV A+E EL
Sbjct: 749 VNNYCIS--VKENGDNIVFLRKIITGGADKSYGIQVAKLAGVPDSVTNRAKELIEEL--- 803
Query: 860 TPSAVISDDAKIEVG------SKRKRISDPNDMSRG------AARAHQFLKEFSDMPLET 907
SA I+ A+ E+ SKRK + +++ G A +KE S++ + +
Sbjct: 804 -SSADIATRAR-EIAEATPAVSKRKPVKKMSEVEAGQLSLFDAINNDTIIKEISEIDITS 861
Query: 908 MDLKEALERVKRMKDDLE 925
M +AL + +++ ++
Sbjct: 862 MTPMDALNTLYALQNKIK 879
>gi|429737003|ref|ZP_19270877.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 138
str. F0429]
gi|429153637|gb|EKX96415.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 138
str. F0429]
Length = 864
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 218/652 (33%), Positives = 335/652 (51%), Gaps = 60/652 (9%)
Query: 291 MRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
M+LD+ +R L + S D K +LF +++ T T MG RLL WL+ PLL + I+AR
Sbjct: 262 MQLDTYTLRNLEITRSLRDGGKKNTLFDVLDFTRTP-MGTRLLRAWLEHPLLTPHRIDAR 320
Query: 351 LDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
LD V V++ LR LR+ L+ + D ERL+ +E + A + +V L S LP +R+A
Sbjct: 321 LDAVAELVENAGLRGTLREQLRSVYDFERLLTRIETQTANARDLVALRVSLAALPAVRTA 380
Query: 411 LQQYEGQFSSLIKERYLDPLESLTDDDHLNKFI--ALVETSVDLDQLENGEYMISSSYDT 468
L G +S + R +++ D L + A+V+ L + G +I + YD
Sbjct: 381 L----GSAASRLLMRAAASIQTF---DALRDTLERAIVDEP-GLSVRDGG--IIRTGYDA 430
Query: 469 GLSALK---NEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
L L+ ++ +SL +++ ++T + + K LK+ FG+ +
Sbjct: 431 VLDELRAFSHDSKSLLQEMEE-RERTRTGI-----KTLKIGYNKVFGYYIEVRHSG---- 480
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAV 580
R ++ +I +T + +F +LK LG + + EY + L + V V
Sbjct: 481 RDQVPDDYIRKQTLANTERFITEELKDFEAKILGAEEKITALEY-HIFTTLRDEVKAQLV 539
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQ 639
+ +++A +DVL S A+ A+S Y RP + G I++ RHP VE
Sbjct: 540 PIQNVARAIA----RVDVLQSLAEAAASYR--YVRPKVTAD--GTILIRDGRHPLVERIL 591
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
+ F+PND +L G + +ITGPNM GKST++RQV + LM QVGSFVP A I+
Sbjct: 592 EREIFVPNDTELSHGGTETMLITGPNMAGKSTYMRQVALLTLMVQVGSFVPARTAEIAPV 651
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D + G STFM EM E A IL+ AT SL+I+DE+GRGTST+DG +A A
Sbjct: 652 DRIFTRIGASDDLVSGQSTFMVEMNEVAQILREATRDSLVILDEIGRGTSTFDGMSIARA 711
Query: 760 ICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTML 819
+ EH+ I A TLFATH+HELT + +E+ + NY ++ + + + L
Sbjct: 712 VVEHIDTRIHAKTLFATHYHELTEMENEH-----------IRNYCIA--VREKGKNVAFL 758
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKR 879
++ GA D+S+GIHVA A P V A E LE + S A+I V S ++
Sbjct: 759 RRIVAGAADKSYGIHVARLAGLPTKVTARAEEILHALEQKESA---SAAAEIPVASAQE- 814
Query: 880 ISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAGDC 931
+ P D + A L E + + TM EA+ + R+++ K+AG+
Sbjct: 815 -TPPTD-GMASLFADGTLAELRTLDVMTMTPLEAMNTLYRLQEQARKEAGEA 864
>gi|229168509|ref|ZP_04296232.1| DNA mismatch repair protein mutS [Bacillus cereus AH621]
gi|228614915|gb|EEK72017.1| DNA mismatch repair protein mutS [Bacillus cereus AH621]
Length = 884
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 335/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
ES++ A+E A+LE
Sbjct: 770 ESLIARAKEVLAQLE 784
>gi|213406337|ref|XP_002173940.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
gi|212001987|gb|EEB07647.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
Length = 1178
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 212/747 (28%), Positives = 355/747 (47%), Gaps = 59/747 (7%)
Query: 146 PNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSEC 205
P R +G +G+ +VD ++ EF DD T +++ L + +E LL +
Sbjct: 435 PQSRADGPLLGVCFVDTATGIVRACEFQDDISRTKLDTLLTQIRPRELLLEKSGISQKTM 494
Query: 206 KTLRDALTRCGVMLTERKKTEFKTRD-LVQDLDRL-----VRGSVEPVRDLVSGFEIAPG 259
+T+++ L+ + + EF ++ V++ D + + +R+++ +A
Sbjct: 495 RTIKNGLSASSTIHNIKPYNEFWDQERTVREFDSCDFFDEHKEMPDALRNVLDKNPLAAS 554
Query: 260 ALGALLSYAELLS---DESNYGNYYIRKYSLDSY-MRLDSAAMRALNVLESKTDANKNFS 315
A+GAL+ Y L D + GN++I S S + L+ ++ L + + D + +
Sbjct: 555 AVGALVWYLRQLKLDKDIFSMGNFHIYDASQQSTSLLLNGQTLKNLEIFNNSFDGGEEGT 614
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
LF LM R C GKRL H W+ PL +IN RLD+V+ +D+ LR + L ++
Sbjct: 615 LFRLMCR-CVTPFGKRLFHSWMNHPLRSPEQINGRLDVVELLLDNPNLRDAILGILHKLP 673
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK----ERYLDPLE 431
D+ER++ + R +++ + R I + + + + F +L+K ER ++ +
Sbjct: 674 DLERMISRVHASRCKPIDFLRILEGFKR---IDTGIHELKEDFGTLMKGTALERIVERMP 730
Query: 432 SLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
+ + L+ + S D+ G ++ ++ K Q +L +H L +
Sbjct: 731 DMASE--LDSWSRAFSWSRARDE---GVFVPEPGFEPEYDESKTHQNALIDDLHELLNR- 784
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN---- 547
K LK T F+ KE ++ + + V + G K N
Sbjct: 785 -------YKKELKCSSLT-----FKDIGKEVYQVEVPVDVKVPVSWCKMSGTKKFNRYYT 832
Query: 548 ----TKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
K+KKL + + Q + R + + + K++A+M D L S A
Sbjct: 833 DELRKKIKKLLESQETHFAIEARMQDKFYARFDEKYSDWVRMIKAVASM----DCLYSLA 888
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITG 663
+++ P RP+I + ++ E RHPCV F+PND +L + ++TG
Sbjct: 889 LASAALGEPCCRPEILDQEQSEVTFEELRHPCVSTLTAGTFVPNDVQLGGMSANMIVLTG 948
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST +RQ + ++MAQ+G +VP A ++ D I R+GA D + STFM E+
Sbjct: 949 PNMAGKSTLLRQTCLAVIMAQLGCYVPAKHARLTPMDSIHTRLGANDDIMSSRSTFMVEL 1008
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL-T 782
ET IL +T R+L+I+DELGRGTSTYDG +A+A+ HLV I F+TH+ L T
Sbjct: 1009 SETKKILDESTPRTLVILDELGRGTSTYDGQAIAYAVLHHLVSNIGCLGFFSTHYQSLCT 1068
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
H + QM SA +D R++T LYK+ G C +S+G++VA A+ P
Sbjct: 1069 DFVHH--KQLRMMQM--------SALVDEAGRRVTFLYKLVDGVCSKSYGMNVASMASVP 1118
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDA 869
E VV +A K+ ELE+FT + DA
Sbjct: 1119 EEVVQVAETKSLELEEFTQTKQTESDA 1145
>gi|56963952|ref|YP_175683.1| DNA mismatch repair protein MutS [Bacillus clausii KSM-K16]
gi|81678867|sp|Q5WFY3.1|MUTS_BACSK RecName: Full=DNA mismatch repair protein MutS
gi|56910195|dbj|BAD64722.1| DNA mismatch repair protein MutS [Bacillus clausii KSM-K16]
Length = 871
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 222/713 (31%), Positives = 361/713 (50%), Gaps = 75/713 (10%)
Query: 153 CTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDAL 212
C + G D+T G AE L + + V+ A+ G +E L K E +
Sbjct: 143 CDLSTGESDVTLIRGGSAELLQEIAASGVKEAIAPAGLEEEL----KAKLGEQQ------ 192
Query: 213 TRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLS 272
G +++ ++ D+ ++ +RL+ +P + A G +L Y
Sbjct: 193 ---GFVVSYEEQ-----EDVPKEYERLINHIQQP---------LLKRAYGRMLHYLLATQ 235
Query: 273 DESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRL 332
+S + + DSY+++D A R L ++++ D K+ SL ++++T TA MG RL
Sbjct: 236 KQSLRHLQQVVFHPADSYLKMDVHAKRNLELVQTLRDKKKSGSLLAVIDQTVTA-MGGRL 294
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQ 392
L W+++PL+D I R +V+AF++ R+ LR L+++ DIERL + +
Sbjct: 295 LRQWIERPLVDRKAIAGRQAVVEAFLEHFFEREQLRDCLRQVYDIERLAARIAYGSVNAR 354
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV-- 450
++V+L +S +P I + L+Q + R+L+ E D +AL+E S+
Sbjct: 355 ELVQLKRSLQNIPEIEATLEQVG------LGGRWLNQSEQFAD------LVALMEQSLVD 402
Query: 451 --DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKG 508
L E G +I Y+ L A ++ + ++ I L + S+ + ++LK+
Sbjct: 403 DPPLSLTEGG--LIVDGYNEELDAYRDASRNGKQWIAELEQ---SEREATGIRSLKVGYN 457
Query: 509 TQFGHVFRITKKEE---PKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ +T+ P R + +T + ++ +LK+ + E+
Sbjct: 458 RVFGYYIEVTRANAHLLPDGRYERK------QTLTNAERYITPELKEKEALILEADEKLA 511
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ + L + + + + LA +SE+DVL FA +A YT+P I + D
Sbjct: 512 DLEYRLFADIRKQVEAYVASLQKLAADISEMDVLAGFASVAEQ--NGYTKPTIT--ESRD 567
Query: 626 IILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
+ ++G RHP VE +++ ND L G +ITGPNMGGKST++RQ+ + ++MAQ
Sbjct: 568 VAIKGGRHPVVETVIKRGSYVENDIDLT-GDRDMLLITGPNMGGKSTYMRQLALTVVMAQ 626
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+GS+VP A++ + D IF R+GA D G STFM EMLET L AT SLI++DE+
Sbjct: 627 IGSYVPAAEATLPLFDQIFTRIGAADDLASGQSTFMVEMLETKDALVKATPHSLILLDEI 686
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA AI E++ E I A TLF+TH+HELT L A+ +T + N H
Sbjct: 687 GRGTSTYDGMALAQAIIEYIYETIGAKTLFSTHYHELTRL----ADSLHT-----LRNVH 737
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
VSA ++ + + L++V GA D+S+G++VAE A P+ V T A ELE
Sbjct: 738 VSAVEENGT--VVFLHQVIEGAADRSYGVYVAELAGLPKQVTTRAEALLTELE 788
>gi|229191894|ref|ZP_04318864.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 10876]
gi|228591445|gb|EEK49294.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 10876]
Length = 884
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|229081021|ref|ZP_04213534.1| DNA mismatch repair protein mutS [Bacillus cereus Rock4-2]
gi|228702335|gb|EEL54808.1| DNA mismatch repair protein mutS [Bacillus cereus Rock4-2]
Length = 884
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|169342625|ref|ZP_02863669.1| DNA mismatch repair protein MutS [Clostridium perfringens C str.
JGS1495]
gi|169299267|gb|EDS81336.1| DNA mismatch repair protein MutS [Clostridium perfringens C str.
JGS1495]
Length = 909
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 317/584 (54%), Gaps = 43/584 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDHLNKFIALVETSVDLD---QLE 456
++P ++ + E SSL+K + LD L + D L+E S+ D L+
Sbjct: 371 GKIPNVKGII---ENCTSSLLKNYHHNLDDLRDIYD---------LLEKSIKEDPSLTLK 418
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
+G+ +I ++ + L+ + + + I SL + + + K+LK+ FG+
Sbjct: 419 DGD-LIKDGFNGEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIE 474
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
I+K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 475 ISKANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIR 531
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP V
Sbjct: 532 NEVENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVV 587
Query: 637 E-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+
Sbjct: 588 EKVIPKGEFIPNDTIINKDDNQLLIITGPNMSGKSTYMRQVAIITLMCQIGSFVPASKAN 647
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
ISV D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG
Sbjct: 648 ISVVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLS 707
Query: 756 LAWAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
+AW++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 708 IAWSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVD 756
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E LE
Sbjct: 757 NNIIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILETLE 800
>gi|226324941|ref|ZP_03800459.1| hypothetical protein COPCOM_02733 [Coprococcus comes ATCC 27758]
gi|225206289|gb|EEG88643.1| DNA mismatch repair protein MutS [Coprococcus comes ATCC 27758]
Length = 883
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 209/615 (33%), Positives = 312/615 (50%), Gaps = 46/615 (7%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+S +E A GALL Y E S + +Y+ +YM LDSA R L ++E+ +
Sbjct: 228 LSDYECGMIASGALLKYLEETQKNSLSHMSRLTRYATGNYMVLDSATRRNLELVETLREK 287
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
K SL ++++T TA MG R L +++QPL+D I RLD V D+ R+++R++
Sbjct: 288 QKRGSLLWVLDKTKTA-MGARTLRKYVEQPLIDKESIVKRLDAVAELKDNAICREEIREY 346
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LD 428
L + D+ERL+ + + A + ++ S LP ++ L+ E S L+KE Y LD
Sbjct: 347 LNPVYDLERLVGKITYQSANPRDLIAFQSSLSMLPSVKCILKDME---SDLLKEIYEELD 403
Query: 429 PLESLTDDDHLNKFIALVETSVD----LDQLENGEYMISSSYDTGLSALKNEQESLERQI 484
PLE L D LV ++ L E G +I Y+ + L+ + + +
Sbjct: 404 PLEELCD---------LVGRAIQEEPPLAMKEGG--IIKDGYNEEVDRLRKAKSEGKNWL 452
Query: 485 HSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVK 544
L + + K L++ FG+ +T + + T + +T + +
Sbjct: 453 ADLETKEREKTGI---KNLRIRYNKVFGYYLEVTNSFKDLVPDYYTRK----QTLANAER 505
Query: 545 FTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
+ +LK+L D ++ + EL V T + A +++LDV+ S A
Sbjct: 506 YIIPELKELEDTILGAEDKLCALEYELYCEVRNTIAAELTRIQRTAKAVAKLDVIASLAL 565
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITG 663
+A Y RP IN V DI RHP VE + FI ND L K IITG
Sbjct: 566 VAER--NNYVRPKINEKGVIDI--RDGRHPVVEKMIPNDMFIANDTYLDDKKQRISIITG 621
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST++RQ + +LMAQ+GSFVP A+I + D IF RVGA D G STFM EM
Sbjct: 622 PNMAGKSTYMRQAALIVLMAQLGSFVPASSANIGLVDRIFTRVGASDDLASGQSTFMVEM 681
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHEL 781
E A+IL+ AT +SL+I+DE+GRGTST+DG +AWA+ E++ + A TLFATH+HEL
Sbjct: 682 NEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVVEYISNSKLLGAKTLFATHYHEL 741
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T L + +N V NY ++ + + L K+ G D+S+GI VA+ A
Sbjct: 742 TELEGKISN---------VNNYCIA--VKEKGDDIVFLRKIVKGGADKSYGIQVAKLAGV 790
Query: 842 PESVVTLAREKAAEL 856
P+ V+ A+E EL
Sbjct: 791 PDPVINRAKEIVEEL 805
>gi|110803440|ref|YP_698493.1| DNA mismatch repair protein MutS [Clostridium perfringens SM101]
gi|123047422|sp|Q0STR4.1|MUTS_CLOPS RecName: Full=DNA mismatch repair protein MutS
gi|110683941|gb|ABG87311.1| DNA mismatch repair protein MutS [Clostridium perfringens SM101]
Length = 910
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 316/582 (54%), Gaps = 39/582 (6%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YSL +M +D ++ R L + E+ + +K SL ++++T T+ MG R+L W+++PL
Sbjct: 252 IEVYSLVDFMTIDLSSRRNLELTENLREKSKKGSLLWVLDKTETS-MGSRMLRRWIEEPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I RL+ V+ +D +L L++ L I DIER++ + + A + ++ L S
Sbjct: 311 VNKEKITLRLNAVEELFNDLSLNDSLKEALHDIYDIERILGKISNKNANAKDLIALKTSI 370
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
++P ++ + E SSL+K Y L+ L D L+E S+ D L++G
Sbjct: 371 GKIPNVKGII---ENCTSSLLK-NYHHNLDDLRD------IYELLEKSIKEDPSLTLKDG 420
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+ +I ++ + L+ + + + I SL + + + K+LK+ FG+ I+
Sbjct: 421 D-LIKDGFNGEIDELRLAKTNGKDWISSLENR---EREFTGIKSLKVGFNKVFGYYIEIS 476
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
K I + ++I +T + +F +LK++ ++ E+ + + ++ +
Sbjct: 477 KANYSSIPE---GRYIRKQTLANAERFITPELKEIEEKLLGASEKLCSLEYDIFLDIRNE 533
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE- 637
+ K+ A +++ELD + + A +A + +P+IN G+ +E RHP VE
Sbjct: 534 VENHIDRLKTTAKIIAELDCISNLAFVA--LENDFIKPEINED--GETKIENGRHPVVEK 589
Query: 638 AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
FIPND + + + IITGPNM GKST++RQV + LM Q+GSFVP +A+IS
Sbjct: 590 VIPKGEFIPNDTIINKDDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANIS 649
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
V D IF R+GA D G STFM EM E ++ILK AT+ SL+++DE+GRGTSTYDG +A
Sbjct: 650 VVDKIFTRIGASDDLAGGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIA 709
Query: 758 WAICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
W++ E++ + +R TLFATH+HELT L E + GV NY V+ +
Sbjct: 710 WSVIEYICKNKNLRCKTLFATHYHELTKLEGE---------IHGVRNYSVA--VKEVDNN 758
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L K+ G DQS+GI VA+ A P+ V+ A+E LE
Sbjct: 759 IIFLRKIIEGGADQSYGIEVAKLAGIPDEVINRAKEILETLE 800
>gi|206977880|ref|ZP_03238768.1| DNA mismatch repair protein MutS [Bacillus cereus H3081.97]
gi|217961190|ref|YP_002339758.1| DNA mismatch repair protein MutS [Bacillus cereus AH187]
gi|375285691|ref|YP_005106130.1| DNA mismatch repair protein MutS [Bacillus cereus NC7401]
gi|423353471|ref|ZP_17331098.1| DNA mismatch repair protein mutS [Bacillus cereus IS075]
gi|423374434|ref|ZP_17351772.1| DNA mismatch repair protein mutS [Bacillus cereus AND1407]
gi|423567336|ref|ZP_17543583.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-A12]
gi|226723053|sp|B7HLA3.1|MUTS_BACC7 RecName: Full=DNA mismatch repair protein MutS
gi|206743880|gb|EDZ55299.1| DNA mismatch repair protein MutS [Bacillus cereus H3081.97]
gi|217065927|gb|ACJ80177.1| DNA mismatch repair protein MutS [Bacillus cereus AH187]
gi|358354218|dbj|BAL19390.1| DNA mismatch repair protein MutS [Bacillus cereus NC7401]
gi|401089284|gb|EJP97455.1| DNA mismatch repair protein mutS [Bacillus cereus IS075]
gi|401094346|gb|EJQ02428.1| DNA mismatch repair protein mutS [Bacillus cereus AND1407]
gi|401214424|gb|EJR21154.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-A12]
Length = 892
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 206/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++T A+E A+LE
Sbjct: 776 DSLITRAKEVLAQLE 790
>gi|392426160|ref|YP_006467154.1| DNA mismatch repair protein MutS [Desulfosporosinus acidiphilus
SJ4]
gi|391356123|gb|AFM41822.1| DNA mismatch repair protein MutS [Desulfosporosinus acidiphilus
SJ4]
Length = 850
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 240/785 (30%), Positives = 376/785 (47%), Gaps = 83/785 (10%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESA-----LVALGCKECLLPTEAVKSSECKTLRD 210
GL ++DL+ EF + F ES L + E LLP E +K S+
Sbjct: 133 GLSFLDLST-----GEF---TIFQTAESEVLLAELSLIHPAEILLPPELMKKSKL----- 179
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYA-E 269
G + R ++ +++R L D+ G L+ F +A A AL Y E
Sbjct: 180 ---WVGYFCSIRDRSSYQSRVL----DQRFPGQA----SLLEEFPVAASAAAALWEYVLE 228
Query: 270 LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+ I+ Y + M LD R L + ES + + +L +++ T TA +G
Sbjct: 229 TMPGVDPSHIVEIKTYRSEQRMFLDQWTRRNLELTESLRNQGRKGTLLSVLDMTQTA-LG 287
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL W+ +PLL EI RL+ V+ D+ RQDL + L ++ D+ERLM + A
Sbjct: 288 GRLLRHWIDKPLLVEAEIEQRLNNVEELTSDSFSRQDLSKILAKVYDLERLMGRVSYGTA 347
Query: 390 GLQQIVKLYQSSIRLPYIRSALQ-QYEGQFSSLIKE-RYLDPLESLTDDDHLNKFIALVE 447
+ ++ L Q+ LP +R L+ G + + LDPL ++K + +
Sbjct: 348 NAKDLLSLAQTLALLPELREVLKASTAGSLKAKVPLLEGLDPL--------VHKLLDALN 399
Query: 448 TSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDK 507
S + L +G +I + Y + L++ + + L + ++LK+
Sbjct: 400 PSPPIS-LRDGN-IIKTGYSQEVDELRSIATGGKEWVAKLENAERERTGI---RSLKIGY 454
Query: 508 GTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNC 567
FG+ IT + + +I +T + +F +LK+ + E K
Sbjct: 455 TKVFGYYIEITHSNA----RLVPEDYIRKQTLSNAERFVTPELKEYEQKILGAEERLKEL 510
Query: 568 QKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII 627
+ EL + + +++++ A L+E+DV +S A++A YTRP I G I
Sbjct: 511 EFELFQTLREEVRSYTQVILRAADSLAEIDVYVSLAEIA--VRKRYTRPQITTD--GQIS 566
Query: 628 LEGSRHPCVEAQDWVN---FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
+ RHP VE D + F+PND +L +ITGPNM GKST++RQV + +LMA
Sbjct: 567 ITEGRHPVVE--DMLEAGVFVPNDTQL-SFDHHLAVITGPNMAGKSTYMRQVALIVLMAH 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+GSFVP +A+IS+ D IF RVGA D G STFM EM E A ILK AT +SLII+DE+
Sbjct: 624 IGSFVPAKQAAISLVDRIFTRVGASDDLAAGQSTFMVEMHEVAHILKYATKKSLIILDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
GRGT+T+DG +AWA+ E+LV+ E TLFATH+HELT L ++F G+ N
Sbjct: 684 GRGTATFDGLSIAWAVAEYLVQHPEFTPKTLFATHYHELTQL----EDDFP-----GLFN 734
Query: 803 YHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
HV + + L+K+ PG D+S+GI VA A P ++ A+ ELE
Sbjct: 735 LHVG--VKERGEDIIFLHKILPGRADRSYGIQVARLAGLPHELLQRAKTLLLELEATKSV 792
Query: 863 AVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKD 922
++D ++ + P H L+E + +PLE M ++AL+ + ++D
Sbjct: 793 PSLADSSQAVTQFSFFDLPKP----------HPLLEELAQLPLEDMTSRQALQYLFDLRD 842
Query: 923 DLEKD 927
++ D
Sbjct: 843 RIQSD 847
>gi|154497030|ref|ZP_02035726.1| hypothetical protein BACCAP_01323 [Bacteroides capillosus ATCC
29799]
gi|150273429|gb|EDN00557.1| putative DNA mismatch repair protein MutS [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 869
Score = 285 bits (730), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 215/636 (33%), Positives = 324/636 (50%), Gaps = 54/636 (8%)
Query: 255 EIAPGALGALLSY--AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANK 312
E+A A G LLSY +D S+ + + M LD A R L + E+ K
Sbjct: 235 ELAVQAAGGLLSYLYETQKTDLSHIAALTVHSSASRPSMELDLTARRTLELTETMRGKEK 294
Query: 313 NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLK 372
SL ++++T TA MG RL+ WL+QPLL IN RL+ V+A VDD R ++ L+
Sbjct: 295 RGSLLWVLDKTRTA-MGHRLIRTWLEQPLLSPVAINRRLEAVKALVDDPIARDEIVLCLR 353
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLES 432
I+D+ERL+ + AG + + L LP +R+ L+ + +++
Sbjct: 354 EITDLERLIGRIVYGTAGGRDLAALAAGLGHLPDLRALLEPFSAGLLPTLRQEL------ 407
Query: 433 LTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
D L L+ +++D D + G + I + Y+ + L+N + + + +
Sbjct: 408 ----DDLADLRGLITSAIDDDPPFSVREGGF-IRAGYNADVDYLRNIMTNGKGMVAEVEA 462
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ + K+LK+ FG+ ++K ++ +I +T + ++ +
Sbjct: 463 REKEKTGI---KSLKVGYNKVFGYYIEVSKS----YYDQVPDTYIRKQTLANCERYITQE 515
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQ-TAVTFSEIFKSLATMLSELDVLLSFADLASS 608
LK + + + +L V + TA EI +S A ++ LDVL SFA +A+
Sbjct: 516 LKDMEHTILSAQDRVVALEYQLFCDVREKTAARVQEIQRS-ARAVAALDVLTSFACVAAD 574
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMG 667
Y P ++ D DI E RHP VE F+PND + G++ IITGPNM
Sbjct: 575 --NHYCMPVVDLSDRLDI--EEGRHPVVEKMLKNALFVPNDAHMDGGENLVAIITGPNMA 630
Query: 668 GKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
GKST++RQV + LMAQ+GSFVP A I + D +F R+GA D G STFM EM E A
Sbjct: 631 GKSTYMRQVALIALMAQMGSFVPAKSAHIGIVDRVFTRIGASDDLSAGQSTFMVEMTEVA 690
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHFHELTALA 785
+LK AT +SL+I+DE+GRGTSTYDG +A A+ E+ ++ R A TLFATH+HE+T L
Sbjct: 691 ELLKNATSKSLLILDEIGRGTSTYDGMSIARAVLEYCADKKRLGAKTLFATHYHEITCL- 749
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRK--LTMLYKVEPGACDQSFGIHVAEFANFPE 843
Q+ GV NY+++A RK + L K+ G DQS+G+ VA+ A PE
Sbjct: 750 --------EGQIPGVKNYNIAAK----KRKGDVIFLRKIVRGGADQSYGVEVAKLAGVPE 797
Query: 844 SVVTLAREKAAELED-----FTPSAVI-SDDAKIEV 873
V+T ARE ELE P+AV +DD +I +
Sbjct: 798 RVITRAREILEELESGQGPCAVPAAVPKADDGQISL 833
>gi|229134577|ref|ZP_04263387.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST196]
gi|228648838|gb|EEL04863.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST196]
Length = 884
Score = 285 bits (730), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 335/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLT--NKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
ES++ A+E A+LE
Sbjct: 770 ESLIARAKEVLAQLE 784
>gi|417752051|ref|ZP_12400291.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333772185|gb|EGL49058.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 851
Score = 285 bits (730), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 224/740 (30%), Positives = 361/740 (48%), Gaps = 84/740 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCCYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ + Y+D L + D D L + L+ T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILESFNSA--------YVDKL--VNDIDSLPELEYLIRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLV----PDHFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAAVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--IKIQEGRHAVVEKVMGVQEYIPNSISFNQETS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+G FV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGLFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTMFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A PE++++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPEALLSRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGS 875
E SA +IS +K+E S
Sbjct: 785 EAQAQSAEIISVPSKVEPSS 804
>gi|434403688|ref|YP_007146573.1| DNA mismatch repair protein MutS [Cylindrospermum stagnale PCC
7417]
gi|428257943|gb|AFZ23893.1| DNA mismatch repair protein MutS [Cylindrospermum stagnale PCC
7417]
Length = 865
Score = 285 bits (730), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 232/749 (30%), Positives = 348/749 (46%), Gaps = 94/749 (12%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEA---------------- 199
GL Y D++ + D H T L+ L E L PT A
Sbjct: 165 GLAYADISTGEYLTTQGSDLEHLTQ---ELMRLQPSEVLFPTNAPDLGSLLRPGETSPSL 221
Query: 200 ---VKSSECKTLRDALTRCGVMLTERKKTEFKTRDL----VQDLDRLVRGSVEPVRDLVS 252
+ S C +LR + R +FK R L + L VR
Sbjct: 222 PQCLPPSFCYSLRSQIPFSQAEARPRLLQKFKVRSLEGLGCEHLPLAVR----------- 270
Query: 253 GFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANK 312
A G LL Y E + +R Y++ Y+ +D R L + ++ D
Sbjct: 271 -------AAGGLLEYLEDTQKANTVVLQTLRTYTITDYLIVDQQTRRNLEITQTVRDGTF 323
Query: 313 NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLK 372
+ SL ++RT TA MG R L WL QPLLD+ I +R D +Q V++T LRQDLRQ L+
Sbjct: 324 HGSLLWALDRTSTA-MGGRALRRWLLQPLLDIKGIRSRQDTIQELVENTPLRQDLRQLLR 382
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP-LE 431
+I D+ERL A + +V L S RLP + + F +++ + P LE
Sbjct: 383 QIYDLERLTGRAGSGTANARDLVALADSLSRLPQLSRLVADAHSPFLKALQK--VPPVLE 440
Query: 432 SLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
L HL+ +VE S + E G +I + L K E ++ I +L
Sbjct: 441 ELAQKLHLH----IVE-SPPIHLKEGG--LIRPGINPQLDERKATVEGDQQWIANLEVDE 493
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK 551
+ +P LK+ FG+ IT+ + + +I +T + +F LK
Sbjct: 494 RTRTGIP---NLKVGFNKTFGYYISITRSKSDTV----PPNYIRKQTLTNEERFITPDLK 546
Query: 552 KLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPT 611
+ + ++ + E+ + F+EI ++L+ ++ DVL A+LA+
Sbjct: 547 EREARILSARDDLNELEYEIFASLRAEVGQFAEIIRNLSRAVAAADVLCGLAELAAH--Q 604
Query: 612 PYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF-IPNDCKLIRGKSWFQ----------- 659
Y RPD+ ++++ RHP VE F +PN L G++ Q
Sbjct: 605 GYCRPDMVAGR--EVVIFDGRHPVVEQSLPAGFFVPNSTGL-GGETNRQDAEGAKEEEEK 661
Query: 660 ----IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
I+TGPN GKS ++RQVG+ LMAQVGSFVP A++ + D IF RVGA D G
Sbjct: 662 PDLVILTGPNASGKSCYLRQVGLIQLMAQVGSFVPARLANLGICDRIFTRVGAVDDLATG 721
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
STFM EM ETA+IL AT RSL+++DE+GRGT+T+DG +AWA+ E+L +IR+ T+FA
Sbjct: 722 QSTFMVEMNETANILNHATSRSLVLLDEIGRGTATFDGLSIAWAVAEYLAVDIRSRTIFA 781
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
TH+HEL LA N VANY V+ + ++ L++V+PG D+S+GI
Sbjct: 782 THYHELNELATILPN---------VANYQVT--VKELPDQIIFLHQVQPGGADKSYGIEA 830
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAV 864
A P V+ A++ ++E + A+
Sbjct: 831 GRLAGLPAVVIKRAKQVMGQIEQHSKIAM 859
>gi|408787212|ref|ZP_11198943.1| DNA mismatch repair protein MutS [Rhizobium lupini HPC(L)]
gi|408486843|gb|EKJ95166.1| DNA mismatch repair protein MutS [Rhizobium lupini HPC(L)]
Length = 883
Score = 285 bits (730), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 219/662 (33%), Positives = 327/662 (49%), Gaps = 58/662 (8%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+ S S + +D A L ++++ + ++ SL +NRT T G G RLL L PL D
Sbjct: 260 RESAASTLFIDPATRANLELVKTLS-GERDGSLLHALNRTVTGG-GARLLAERLMSPLTD 317
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
INARLD V +DD +L LR LK+++D+ R + L R G + + + Q
Sbjct: 318 PERINARLDAVAYLIDDVSLCDGLRDALKQVADMPRALSRLALERGGPRDLGAIRQGLAS 377
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV---DLDQLENGEY 460
I + L Q L+ E +L D L + + S+ DL L+
Sbjct: 378 AERIAAILDQ------GLLPEELAS---ALADLKALPSGLEAMLGSMLADDLPLLKRDGG 428
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+ + L ++ ++ R I L Q A + + K+LK+ G+ +T
Sbjct: 429 FLREGANPELDEVRALRDQSRRVIAGLQLQYAEETGI---KSLKIKHNNVLGYFIEVTAG 485
Query: 521 EEPKIRK--KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
+ + +FI +T ++FT T+L L + E + E R+++
Sbjct: 486 NADVMTATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEAFERMVKA 545
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
V ++ K+ A L+ +DV S A LA+ Y RP ++ I +G RHP VE
Sbjct: 546 VVQQADAIKAGALALAVIDVASSLAYLATE--QAYCRPIVDASMTFSI--KGGRHPVVEQ 601
Query: 639 ----QDWVNFIPNDCKLI------RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
Q FI N+C L G W ++TGPNMGGKSTF+RQ + ++AQ+GSF
Sbjct: 602 ALRRQSAGPFIANNCDLSAVNGGKNGAIW--LLTGPNMGGKSTFLRQNALIAILAQIGSF 659
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VP + A I V D +F+RVGA D RG STFM EM+ETA+IL ATDRSL+I+DE+GRGT
Sbjct: 660 VPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGT 719
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
+T+DG +AWA EHL E R LFATHFHELT L+ E + M
Sbjct: 720 ATFDGLSIAWASVEHLHEVNRCRCLFATHFHELTVLS-EKLGRLSNATM----------R 768
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---TPSAVI 865
+ + L++V PGA D+S+GI VA A P SVV ARE +LED P++ +
Sbjct: 769 VKEWEGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQL 828
Query: 866 SDDAKI-EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
DD + ++ +R+ G+++ + LK F+ + M +EAL+ + +K +L
Sbjct: 829 IDDLPLFQIAVRREETRKA-----GSSKVEEALKSFNP---DEMTPREALDALYALKKEL 880
Query: 925 EK 926
K
Sbjct: 881 GK 882
>gi|148264432|ref|YP_001231138.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
gi|189030727|sp|A5G447.1|MUTS_GEOUR RecName: Full=DNA mismatch repair protein MutS
gi|146397932|gb|ABQ26565.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
Length = 872
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 241/795 (30%), Positives = 367/795 (46%), Gaps = 84/795 (10%)
Query: 150 ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGC---KECLLPTEAVKSSECK 206
++ T GL Y+DL+ EF + ++A+ + C +E +LP ++ K
Sbjct: 134 DDATTWGLSYLDLST-----GEF-RVTELDGFDAAVAEVACVKPREIILPAVFRENGRMK 187
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVR------GSVEPVRDLVSGFEIAPGA 260
L + +T T F D V DLD R G P G A
Sbjct: 188 EL--------MPVTAGLATTF-VDDWVYDLDYCKRLIGSHFGGASPSALGCDGLNTGLYA 238
Query: 261 LGALLSY-AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
+ A+L Y E + + N I Y+ Y+ LD + R L + + + + SL GL
Sbjct: 239 ICAVLHYLQETQKGRAGHVNSII-PYTNREYLVLDESTRRNLELTATLAEGKRKGSLLGL 297
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
M+RT TA MG R + W+ PL+ + I R D ++ FV D + R L L + D+ER
Sbjct: 298 MDRTTTA-MGGRKMKQWINYPLVTIQSITERQDAIEEFVQDPSRRTALVFLLNGVYDLER 356
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + AG + +V + +S R+P I+ L + E L+PL L
Sbjct: 357 LNGRISLASAGAKDLVAMKESLARIPGIKELLASSSSVLLRRLNEG-LNPLPDL------ 409
Query: 440 NKFIALVETSVDLDQLENGEY------MISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
+ L+ + +EN + +I+ Y+ L L+ + I L Q
Sbjct: 410 ---VGLIAGGI----VENPPFVLRDGGIIADGYNAELDELRAISREGKGFIARLEAQEKG 462
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ +LK+ FG+ +TK I +I +T + ++ +LK+
Sbjct: 463 RTGI---NSLKIRYNKVFGYYIEVTKTNLTSI----PADYIRKQTLANAERYITPELKEY 515
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
D+ + + + L + +T EI A L+ LDVL S A+LA Y
Sbjct: 516 EDKVLGAEDRIRELEFSLFQEIRETVTGHGEIVARTADCLATLDVLASLAELAHE--RNY 573
Query: 614 TRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
RP ++ D + + RHP +EA F+PND L G++ IITGPNM GKSTF
Sbjct: 574 CRPLVD--DGTTLFISEGRHPVIEAMHQGERFVPNDTLLDNGENQLIIITGPNMAGKSTF 631
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQV + LMAQ+GSFVP A IS+ D IF RVGA D RG STFM EM+E+A+IL+
Sbjct: 632 MRQVALITLMAQMGSFVPATEAHISLVDRIFTRVGASDNLARGQSTFMVEMMESANILRH 691
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHFHELTALAHENAN 790
AT +SL+I+DE+GRGTST+DG +AWA+ E L + + A TLFATH+HELT LA
Sbjct: 692 ATPKSLVILDEIGRGTSTFDGVSIAWAVAEFLHDNDKHAAKTLFATHYHELTELAVTRKR 751
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+ N++++ + + ++ L K+ G S+GI VA A P V+ A+
Sbjct: 752 ---------IKNFNIA--VKEWNEQIIFLRKIVSGGASHSYGIQVARLAGLPLEVIERAK 800
Query: 851 EKAAELE--DFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDM----- 903
E LE +F + +I G K + + +S + K M
Sbjct: 801 EILQNLEKGEFAEEGI----PRIARGKKSAGSAPASQLSLFDSGEDMLRKRLKGMDVTTL 856
Query: 904 -PLETMDLKEALERV 917
PLE ++L + L+R+
Sbjct: 857 TPLEALNLLDELKRM 871
>gi|296504268|ref|YP_003665968.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|423585820|ref|ZP_17561907.1| DNA mismatch repair protein mutS [Bacillus cereus VD045]
gi|423628850|ref|ZP_17604599.1| DNA mismatch repair protein mutS [Bacillus cereus VD154]
gi|423641148|ref|ZP_17616766.1| DNA mismatch repair protein mutS [Bacillus cereus VD166]
gi|423649634|ref|ZP_17625204.1| DNA mismatch repair protein mutS [Bacillus cereus VD169]
gi|423656630|ref|ZP_17631929.1| DNA mismatch repair protein mutS [Bacillus cereus VD200]
gi|296325320|gb|ADH08248.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171]
gi|401233166|gb|EJR39662.1| DNA mismatch repair protein mutS [Bacillus cereus VD045]
gi|401268395|gb|EJR74443.1| DNA mismatch repair protein mutS [Bacillus cereus VD154]
gi|401280209|gb|EJR86131.1| DNA mismatch repair protein mutS [Bacillus cereus VD166]
gi|401282914|gb|EJR88811.1| DNA mismatch repair protein mutS [Bacillus cereus VD169]
gi|401290371|gb|EJR96065.1| DNA mismatch repair protein mutS [Bacillus cereus VD200]
Length = 890
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|229047452|ref|ZP_04193044.1| DNA mismatch repair protein mutS [Bacillus cereus AH676]
gi|229151970|ref|ZP_04280166.1| DNA mismatch repair protein mutS [Bacillus cereus m1550]
gi|228631525|gb|EEK88158.1| DNA mismatch repair protein mutS [Bacillus cereus m1550]
gi|228723896|gb|EEL75249.1| DNA mismatch repair protein mutS [Bacillus cereus AH676]
Length = 884
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|410458687|ref|ZP_11312444.1| DNA mismatch repair protein MutS [Bacillus azotoformans LMG 9581]
gi|409931037|gb|EKN68025.1| DNA mismatch repair protein MutS [Bacillus azotoformans LMG 9581]
Length = 873
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 218/732 (29%), Positives = 375/732 (51%), Gaps = 84/732 (11%)
Query: 142 VALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVK 201
+A +F N T G Y+DLT + D + +V S + ++G KE ++
Sbjct: 127 IATITDF--NDGTYGFAYIDLTTGEGQITMITGD--WLDVVSEIYSVGAKEIVVSANH-S 181
Query: 202 SSECKTLRDALTRCGVMLTERK-----KTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEI 256
+ + LRD R V ++ + K ++T +L++ ++D
Sbjct: 182 EQQLQELRD---RANVTVSVEEDITIPKVLYETSNLLEQTK---------LKD------- 222
Query: 257 APGALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
LG LL Y L+ + ++ + Y + YM+LD + R L ++E+ K
Sbjct: 223 ---TLGRLLQY--LVKSQKRSLDHIQPVVYYEANQYMKLDIHSKRNLELVETIRTKGKKG 277
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
S L++ T TA MG R L W+++PLL EI RL++V+ + + +RQ+L++ LK +
Sbjct: 278 SFLWLLDSTVTA-MGARRLKQWIERPLLSKVEIENRLNMVETLLKNFFIRQELQEALKPV 336
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
D+ERL + + +++L +S ++P I ++Q + ++ + + +DP ESL
Sbjct: 337 YDLERLSGRVAYGNVNARDLIQLKKSLQQVPIILGLVEQLQNSYADALLQN-MDPCESL- 394
Query: 435 DDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQT 491
L+E ++ + ++ G+ +I Y+ L ++ ++ ++ I L +
Sbjct: 395 --------FQLIEAGINENPPLSIKEGD-IIKDGYNEKLDTYRDAVKNGKQWIAQLEMKE 445
Query: 492 ASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGVKFT 546
+ + K LK+ FG+ +TK E + +K +T + ++
Sbjct: 446 RQETGI---KTLKIGYNRVFGYYLEVTKANIHLLPEGRYERK--------QTLANAERYI 494
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
+LK+ + E+ + + +L ++ + T+ + LA ++SE+D L SFA ++
Sbjct: 495 TPELKEKEAIILEAEEKIVDLEYDLFVQIREQVKTYIPKLQKLAKIISEIDCLQSFAQIS 554
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPN 665
YT+P+ + + I+++ RHP VE + ++ NDC L +S +ITGPN
Sbjct: 555 EEYQ--YTKPEFS--NDRKIVIKEGRHPVVEKVLNSQVYVSNDCYL-DSESEMLLITGPN 609
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST++RQ+ + ++AQ+G +VP +A + + D IF R+GA D + G STFM EMLE
Sbjct: 610 MSGKSTYMRQIALTAILAQIGCYVPAQKAVLPIFDQIFTRIGAADDLVSGQSTFMVEMLE 669
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
+ + AT SLI++DE+GRGTSTYDG LA AI E++ EI A TLF+TH+HELT+L
Sbjct: 670 AKNAITKATQNSLILLDEIGRGTSTYDGMALAQAIIEYIHHEIGAKTLFSTHYHELTSLE 729
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
+ + + N HVSA I+ K+ L+KV+ GA D+S+GIHVAE A PE +
Sbjct: 730 ---------QSLERLKNVHVSA-IEENG-KVVFLHKVKDGAADKSYGIHVAELAELPERL 778
Query: 846 VTLAREKAAELE 857
+ A+E ELE
Sbjct: 779 IKRAKEILDELE 790
>gi|229146341|ref|ZP_04274712.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST24]
gi|228636974|gb|EEK93433.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-ST24]
Length = 884
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|423611988|ref|ZP_17587849.1| DNA mismatch repair protein mutS [Bacillus cereus VD107]
gi|401246995|gb|EJR53339.1| DNA mismatch repair protein mutS [Bacillus cereus VD107]
Length = 889
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|291519454|emb|CBK74675.1| DNA mismatch repair protein MutS [Butyrivibrio fibrisolvens 16/4]
Length = 814
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 206/616 (33%), Positives = 310/616 (50%), Gaps = 40/616 (6%)
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
F A GALLSY + +I Y+ YM LD++ R L + E+ D K
Sbjct: 175 FPFGRVAAGALLSYLKDTQKTELAHLTHITPYTDGKYMLLDNSTRRNLELTETMRDKQKR 234
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL ++++T TA MG R L +++QPLL V+EI R D + + R++LR++L
Sbjct: 235 GSLLWVLDKTKTA-MGARQLKSFVEQPLLSVDEIIRRQDAISELNESLIDREELREYLSS 293
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
+ D+ERL+ + + A + ++ QS L I++ L + LD +
Sbjct: 294 VYDLERLITKITYQSANPRDLIAFKQSIGMLSPIKTLLASFHCHL--------LDDTNAN 345
Query: 434 TDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
DD + L++ ++D + +G+ +I + ++ + L+ + ++ + L
Sbjct: 346 IDD--MKDLYELIDAAIDEEPPISSRDGD-IIKTGFNEEVDRLRRAKVDGKQWLAELE-- 400
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL-ETRKDGVKFTNTK 549
A + D K LK+ FG +T K L + V +T + ++ +
Sbjct: 401 -AKERDKTGIKNLKIKFNKVFGFYLEVTNS-----YKDLVPDYYVRKQTLANAERYYTPE 454
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
LK+L D + + E V T + + + A ++ LD ++S A +A
Sbjct: 455 LKELEDSILGAEDRLNTLEYEYFKTVRDTIASNVDRIQITAKAIALLDAMISLAVVAEK- 513
Query: 610 PTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y RP I+ + DI + RHP VE + FI NDC+L IITGPNM G
Sbjct: 514 -NHYVRPIIDNRGIIDI--KDGRHPVVEQMINADQFISNDCQLDLDSRTIAIITGPNMAG 570
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQV + +LMAQ+GSFVP A I V D IF RVGA D G STFM EM E A+
Sbjct: 571 KSTYMRQVALIVLMAQIGSFVPASSAQIGVVDRIFTRVGASDDLSTGQSTFMVEMNEVAN 630
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
IL AT++SL+I+DE+GRGTSTYDG +AW++ EH+ +I A TLFATH+HELT L
Sbjct: 631 ILHNATNKSLLILDEIGRGTSTYDGLSIAWSVVEHIAYKIGAKTLFATHYHELTELE--- 687
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
Q+ GV NY ++ + + L K+ PG DQS+GI VA A PE V++
Sbjct: 688 ------GQIKGVHNYCIA--VQELGEDIIFLRKIIPGGADQSYGIQVARLAGLPEEVLSR 739
Query: 849 AREKAAELEDFTPSAV 864
AR L + +AV
Sbjct: 740 ARTIVNSLNENDIAAV 755
>gi|253752761|ref|YP_003025902.1| DNA mismatch repair protein MutS [Streptococcus suis SC84]
gi|253754586|ref|YP_003027727.1| DNA mismatch repair protein MutS [Streptococcus suis P1/7]
gi|253756519|ref|YP_003029659.1| DNA mismatch repair protein MutS [Streptococcus suis BM407]
gi|386580987|ref|YP_006077392.1| DNA mismatch repair protein MutS [Streptococcus suis JS14]
gi|386583064|ref|YP_006079468.1| DNA mismatch repair protein MutS [Streptococcus suis SS12]
gi|386589193|ref|YP_006085594.1| DNA mismatch repair protein MutS [Streptococcus suis A7]
gi|403062526|ref|YP_006650742.1| DNA mismatch repair protein MutS [Streptococcus suis S735]
gi|251817050|emb|CAZ52702.1| DNA mismatch repair protein MutS [Streptococcus suis SC84]
gi|251818983|emb|CAZ56830.1| DNA mismatch repair protein MutS [Streptococcus suis BM407]
gi|251820832|emb|CAR47598.1| DNA mismatch repair protein MutS [Streptococcus suis P1/7]
gi|319759179|gb|ADV71121.1| DNA mismatch repair protein MutS [Streptococcus suis JS14]
gi|353735210|gb|AER16220.1| DNA mismatch repair protein MutS [Streptococcus suis SS12]
gi|354986354|gb|AER45252.1| DNA mismatch repair protein MutS [Streptococcus suis A7]
gi|402809852|gb|AFR01344.1| DNA mismatch repair protein MutS [Streptococcus suis S735]
Length = 846
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 216/687 (31%), Positives = 351/687 (51%), Gaps = 79/687 (11%)
Query: 202 SSECKTLRDALTR---CGVMLTERKKTEFKTR-DLVQDLDRLVRGSVEPVRDLVSGFEIA 257
+S C +R+ R G L+E ++ F + +L+ + V V+ + + ++ E A
Sbjct: 159 TSLCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA 218
Query: 258 PGALGALLSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
A G LLSY + D S+ + Y + Y+++D A +L++LE+ K+ S
Sbjct: 219 --AAGKLLSYLHRTQMRDLSHLQK--VVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGS 274
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L+ L++ T TA MG RLL W+ +PL+D+ I R +VQ F+D R DL + LK +
Sbjct: 275 LYWLLDETKTA-MGMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVEALKGVY 333
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLT 434
DIERL + + + +++L Q+ +P I++ LQQ E +L+ LDP+ L
Sbjct: 334 DIERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAG--LDPIPELH 391
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALK----------NEQESLE 481
AL+ +++D + + +G +I + +D L + E E+ E
Sbjct: 392 ---------ALISSAIDPEAQGTITDGN-IIRTGFDETLDQYRLVMREGAGWIAEIEAKE 441
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
R+ ++ LK+D + G+ F +T + F T K+
Sbjct: 442 REASGINN-------------LKIDYNKKDGYYFHVTNSN----LGNVPDHFFRKATLKN 484
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
++ +L K+ Q + ++ N + E+ R+ Q + + LA ++ +DVL +
Sbjct: 485 SERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQA 544
Query: 602 FADLASS----CPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKS 656
FA +A CP +T D ++ ++ RH VE +IPN L +
Sbjct: 545 FAVVAEQQHLVCPR-FT-------DQRELTIDRGRHAVVEKVMGKQTYIPNSIHL-NTDT 595
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
Q+ITGPNM GKST++RQ+ V ++MAQ+GS+VP D+A + + D IF R+GA D + G
Sbjct: 596 HMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRIGAADDLVSGQ 655
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM+E ++ ATDRSLI+ DELGRGT+TYDG LA +I E++ ++I A TLFAT
Sbjct: 656 STFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHDKIGAKTLFAT 715
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L ++ + + N HVS ++T L+K+ G D+S+GIHVA
Sbjct: 716 HYHELTDL---------SQTLEHLENVHVSTL--EKDGQVTFLHKIAQGPADKSYGIHVA 764
Query: 837 EFANFPESVVTLAREKAAELEDFTPSA 863
+ A PE ++ A LE+ P+A
Sbjct: 765 KIAGMPEELLQRADRILQTLENQAPTA 791
>gi|146321975|ref|YP_001201686.1| DNA mismatch repair protein MutS [Streptococcus suis 98HAH33]
gi|386578921|ref|YP_006075327.1| MutS-1 protein [Streptococcus suis GZ1]
gi|189083200|sp|A4W4J7.1|MUTS_STRS2 RecName: Full=DNA mismatch repair protein MutS
gi|145692781|gb|ABP93286.1| Mismatch repair ATPase (MutS family) [Streptococcus suis 98HAH33]
gi|292559384|gb|ADE32385.1| MutS-1 protein [Streptococcus suis GZ1]
Length = 847
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 216/687 (31%), Positives = 351/687 (51%), Gaps = 79/687 (11%)
Query: 202 SSECKTLRDALTR---CGVMLTERKKTEFKTR-DLVQDLDRLVRGSVEPVRDLVSGFEIA 257
+S C +R+ R G L+E ++ F + +L+ + V V+ + + ++ E A
Sbjct: 160 TSLCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA 219
Query: 258 PGALGALLSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
A G LLSY + D S+ + Y + Y+++D A +L++LE+ K+ S
Sbjct: 220 --AAGKLLSYLHRTQMRDLSHLQK--VVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGS 275
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L+ L++ T TA MG RLL W+ +PL+D+ I R +VQ F+D R DL + LK +
Sbjct: 276 LYWLLDETKTA-MGMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVEALKGVY 334
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLT 434
DIERL + + + +++L Q+ +P I++ LQQ E +L+ LDP+ L
Sbjct: 335 DIERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAG--LDPIPELH 392
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALK----------NEQESLE 481
AL+ +++D + + +G +I + +D L + E E+ E
Sbjct: 393 ---------ALISSAIDPEAQGTITDGN-IIRTGFDETLDQYRLVMREGAGWIAEIEAKE 442
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
R+ ++ LK+D + G+ F +T + F T K+
Sbjct: 443 REASGINN-------------LKIDYNKKDGYYFHVTNSN----LGNVPDHFFRKATLKN 485
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
++ +L K+ Q + ++ N + E+ R+ Q + + LA ++ +DVL +
Sbjct: 486 SERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQA 545
Query: 602 FADLASS----CPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKS 656
FA +A CP +T D ++ ++ RH VE +IPN L +
Sbjct: 546 FAVVAEQQHLVCPR-FT-------DQRELTIDRGRHAVVEKVMGKQTYIPNSIHL-NTDT 596
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
Q+ITGPNM GKST++RQ+ V ++MAQ+GS+VP D+A + + D IF R+GA D + G
Sbjct: 597 HMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRIGAADDLVSGQ 656
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM+E ++ ATDRSLI+ DELGRGT+TYDG LA +I E++ ++I A TLFAT
Sbjct: 657 STFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHDKIGAKTLFAT 716
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L ++ + + N HVS ++T L+K+ G D+S+GIHVA
Sbjct: 717 HYHELTDL---------SQTLEHLENVHVSTL--EKDGQVTFLHKIAQGPADKSYGIHVA 765
Query: 837 EFANFPESVVTLAREKAAELEDFTPSA 863
+ A PE ++ A LE+ P+A
Sbjct: 766 KIAGMPEELLQRADRILQTLENQAPTA 792
>gi|228959976|ref|ZP_04121641.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229111242|ref|ZP_04240796.1| DNA mismatch repair protein mutS [Bacillus cereus Rock1-15]
gi|229129046|ref|ZP_04258019.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-Cer4]
gi|228654283|gb|EEL10148.1| DNA mismatch repair protein mutS [Bacillus cereus BDRD-Cer4]
gi|228672236|gb|EEL27526.1| DNA mismatch repair protein mutS [Bacillus cereus Rock1-15]
gi|228799719|gb|EEM46671.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 884
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|118443496|ref|YP_878178.1| DNA mismatch repair protein MutS [Clostridium novyi NT]
gi|166232119|sp|A0Q0M6.1|MUTS_CLONN RecName: Full=DNA mismatch repair protein MutS
gi|118133952|gb|ABK60996.1| DNA mismatch repair protein MutS [Clostridium novyi NT]
Length = 909
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 200/594 (33%), Positives = 316/594 (53%), Gaps = 61/594 (10%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y Y+ +D + R L + E+ D +K SL ++++T TA MG RLL W++QPL+
Sbjct: 254 YETVDYLSIDINSRRNLELTETLRDKSKKGSLLWVLDKTTTA-MGARLLRKWVEQPLIHK 312
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I R + V+ +++ L DLR +LK + DIERL + + ++++ L S L
Sbjct: 313 EIIENRQNAVEEILNNVPLLDDLRNNLKDVYDIERLAGKISSKTVNAKELLSLKNSIGNL 372
Query: 405 PYIRSALQQYEGQFSSLIKERY-----LDPLESLTDDDHLNKFIALVETSVDLDQLENGE 459
P I+ ++ Y + L+K Y L+ L SL D+ L S L E G
Sbjct: 373 PIIKKIIENYN---TDLLKNIYSSLDCLEDLYSLLDNSIL--------PSPALSIKEGG- 420
Query: 460 YMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITK 519
+I Y+ + L+ + I SL +Q + ++ K+LK+ FG+ ITK
Sbjct: 421 -IIKDGYNKTIDELRMAKSHGTEWIASLEEQ---ERNITGIKSLKVKYNKVFGYYIEITK 476
Query: 520 KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY----QKVLEEYKNC---QKELV 572
++ + ++I +T + +F +LK++ D+ +K++E N +EL+
Sbjct: 477 SNLNQVPE---NRYIRKQTLANCERFITPELKEVEDKILGAQEKLMELEYNVFVEIRELI 533
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
+ I K+ A ++S +DVL S A +A + Y++P I G+++++ R
Sbjct: 534 EKEIYR-------IKNTAKLISSIDVLQSLAIVA--LESNYSKPIIKLD--GELLIKDGR 582
Query: 633 HPCVE---AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
HP VE +D +F+ ND L +ITGPNM GKST++RQV + LMAQ+GSFV
Sbjct: 583 HPVVEKMIPRD--SFVSNDTILDNKDHQLLLITGPNMAGKSTYMRQVALITLMAQIGSFV 640
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
P A I + D IF R+GA D RG STFM EM E A+IL AT++SLI++DE+GRGTS
Sbjct: 641 PAKEAEIVICDKIFTRIGASDDLARGKSTFMVEMWEVANILNNATNKSLILLDEVGRGTS 700
Query: 750 TYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSA 807
TYDG +AWA+ E++ ++ +++ TLFATH+HELT+L ++ GV NY ++
Sbjct: 701 TYDGLSIAWAVIEYICKDNNLKSKTLFATHYHELTSLEG---------KIKGVKNYSIA- 750
Query: 808 HIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTP 861
+ + L K+ G D+S+GI VA+ A P V A+E LE+ +P
Sbjct: 751 -VKKVDDDIIFLRKIIEGGADESYGIEVAKLAGIPSVVTNRAKEILNTLEENSP 803
>gi|427730896|ref|YP_007077133.1| DNA mismatch repair protein MutS [Nostoc sp. PCC 7524]
gi|427366815|gb|AFY49536.1| DNA mismatch repair protein MutS [Nostoc sp. PCC 7524]
Length = 871
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 230/754 (30%), Positives = 349/754 (46%), Gaps = 92/754 (12%)
Query: 152 GCTIGLGYVDLTKRVLGLAEFL--DDSHFTNVESALVALGCKECLLPT------------ 197
G GL Y D++ EFL DS ++ L+ L E L+PT
Sbjct: 161 GNHWGLAYADIST-----GEFLTTQDSDLEHLTQELMRLQPSEVLVPTNAPDLGSLLRPG 215
Query: 198 -------EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDL 250
E + S C +LR + + FK R L + L
Sbjct: 216 ESSPHLPECLPPSFCYSLRSQVPFSQGEARNKLLQTFKVRSL-EGLG------------- 261
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDA 310
+A A G LL Y E E+ +R Y++ Y+ +D R L + ++ D
Sbjct: 262 CDHLPLAVRAAGGLLEYVEDTQKENRVSLQRLRTYTITDYLIVDQQTRRNLEITQTVRDG 321
Query: 311 NKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQH 370
+ SL ++RT TA MG R L WL QPLLD+ I AR D +Q ++T LRQDLRQ
Sbjct: 322 TFHGSLLWALDRTSTA-MGSRSLRRWLLQPLLDIKGIRARQDTIQELAENTPLRQDLRQL 380
Query: 371 LKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP- 429
L++I D+ERL A + + L S RLP + + F +++ + P
Sbjct: 381 LRQIYDLERLTGRTSSGTANARDLAALADSLSRLPELARLVADARSPFLKALQK--VPPI 438
Query: 430 LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
LE L + H A + S + E G +I + L K E+ ++ I +L
Sbjct: 439 LEELAQNIH-----AHIVESPPIHLKEGG--LIRPGVNPQLDERKATVEADQQWIANLEV 491
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ +P LK+ FG+ I++ + ++ +I +T + ++ +
Sbjct: 492 DERARTGIPT---LKVGFNKTFGYYISISRAKADQV----PNNYIRKQTLTNEERYITPE 544
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
LK+ + ++ + E+ + + T +E+ ++L+ ++ DVL A+LA
Sbjct: 545 LKEREARILTARDDLNQLEYEVFVALREEVGTQAEVIRTLSRAVAAADVLCGLAELAVQ- 603
Query: 610 PTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIR-----GKSW------ 657
Y RP++ P +II RHP VE F+PN +L G S
Sbjct: 604 -QGYCRPEMIPGREIEII--DGRHPVVEQSLPAGFFVPNSTELGSRELGVGNSETPPLPT 660
Query: 658 -------FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
I+TGPN GKS ++RQVG+ LMAQ+GSFVP A + + D IF RVGA D
Sbjct: 661 PHSPLPDLIILTGPNASGKSCYLRQVGLIQLMAQIGSFVPAKSAKLGICDRIFTRVGAVD 720
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
G STFM EM ETA+IL AT RSL+++DE+GRGT+T+DG +AWA+ E+L EI A
Sbjct: 721 DLATGQSTFMVEMNETANILNHATARSLVLLDEIGRGTATFDGLSIAWAVAEYLATEITA 780
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQS 830
T+FATH+HEL LA N VANY V+ + ++ L++V+PG D+S
Sbjct: 781 RTIFATHYHELNELAGMLPN---------VANYQVT--VKELPDQIIFLHQVQPGGADKS 829
Query: 831 FGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
+GI A P V+ A++ ++E + A+
Sbjct: 830 YGIEAGRLAGLPSVVIQRAKQVMGQIEKHSKIAI 863
>gi|423378445|ref|ZP_17355729.1| DNA mismatch repair protein mutS [Bacillus cereus BAG1O-2]
gi|423441501|ref|ZP_17418407.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4X2-1]
gi|423448273|ref|ZP_17425152.1| DNA mismatch repair protein mutS [Bacillus cereus BAG5O-1]
gi|423464575|ref|ZP_17441343.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6O-1]
gi|423533917|ref|ZP_17510335.1| DNA mismatch repair protein mutS [Bacillus cereus HuB2-9]
gi|423540814|ref|ZP_17517205.1| DNA mismatch repair protein mutS [Bacillus cereus HuB4-10]
gi|423547053|ref|ZP_17523411.1| DNA mismatch repair protein mutS [Bacillus cereus HuB5-5]
gi|423623156|ref|ZP_17598934.1| DNA mismatch repair protein mutS [Bacillus cereus VD148]
gi|401128867|gb|EJQ36550.1| DNA mismatch repair protein mutS [Bacillus cereus BAG5O-1]
gi|401172002|gb|EJQ79223.1| DNA mismatch repair protein mutS [Bacillus cereus HuB4-10]
gi|401178774|gb|EJQ85947.1| DNA mismatch repair protein mutS [Bacillus cereus HuB5-5]
gi|401259929|gb|EJR66103.1| DNA mismatch repair protein mutS [Bacillus cereus VD148]
gi|401635212|gb|EJS52968.1| DNA mismatch repair protein mutS [Bacillus cereus BAG1O-2]
gi|402418162|gb|EJV50462.1| DNA mismatch repair protein mutS [Bacillus cereus BAG4X2-1]
gi|402420842|gb|EJV53113.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6O-1]
gi|402464136|gb|EJV95836.1| DNA mismatch repair protein mutS [Bacillus cereus HuB2-9]
Length = 890
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+LL NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLLKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|47568274|ref|ZP_00238977.1| DNA mismatch repair protein MutS [Bacillus cereus G9241]
gi|47555102|gb|EAL13450.1| DNA mismatch repair protein MutS [Bacillus cereus G9241]
Length = 892
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|229123283|ref|ZP_04252487.1| DNA mismatch repair protein mutS [Bacillus cereus 95/8201]
gi|228660059|gb|EEL15695.1| DNA mismatch repair protein mutS [Bacillus cereus 95/8201]
Length = 886
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L ++ N+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EDSLNQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|434376827|ref|YP_006611471.1| DNA mismatch repair protein MutS [Bacillus thuringiensis HD-789]
gi|401875384|gb|AFQ27551.1| DNA mismatch repair protein MutS [Bacillus thuringiensis HD-789]
Length = 892
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQS-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|229915836|ref|YP_002884482.1| DNA mismatch repair protein MutS [Exiguobacterium sp. AT1b]
gi|259511167|sp|C4L191.1|MUTS_EXISA RecName: Full=DNA mismatch repair protein MutS
gi|229467265|gb|ACQ69037.1| DNA mismatch repair protein MutS [Exiguobacterium sp. AT1b]
Length = 842
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 203/584 (34%), Positives = 301/584 (51%), Gaps = 54/584 (9%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y ++ +M+LD+ R L + S + SL L++ T TA MG RLL WL+QPL
Sbjct: 239 YEVEQHMQLDANTARNLELFRSARSGERKGSLLSLLDETTTA-MGGRLLKRWLEQPLYTE 297
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I R D V+ VDD LR L++ LKR+ DIERL+ + A + +V+L + R+
Sbjct: 298 QGIRERQDAVENLVDDFMLRDQLQEELKRVYDIERLVAKVGYGTANARDLVQLRDTLERM 357
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P +RS LQ + I E+ LD E+L++ + A + S + E G MI
Sbjct: 358 PSVRSLLQTVKADRLQQI-EQNLDSFETLSE-----QLRAALVDSPPISTKEGG--MIRH 409
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK---- 520
Y L L + + + I +L +Q + K+LK+ FG+ +TK
Sbjct: 410 GYSDELDELLEAKANGKSWIANLEQQERIATGI---KSLKVGYNRVFGYYLEVTKANAKL 466
Query: 521 -EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNR 574
EE + +K +T + ++ +LK+ LG + + EY +L
Sbjct: 467 LEEGRYERK--------QTLTNAERYITPELKEKEALILGAEEKSCTLEY-----DLFVA 513
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
+ + T+++ + LA LSELDVLL+ A +A R + P + +E RHP
Sbjct: 514 LREEVKTYTKPLQQLARSLSELDVLLALAVVAEK------REYVRPVTTSHVQIERGRHP 567
Query: 635 CVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
+E ++ ND L + +ITGPNM GKST++RQ + ++ Q+GSFVP +
Sbjct: 568 VIETVLPRGEYVANDLTLDDTRQML-LITGPNMSGKSTYMRQFALIAILHQIGSFVPAEA 626
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A + + D IF R+GA D + G STFM EM ET + AT SLI++DE+GRGTSTYDG
Sbjct: 627 AELPLFDRIFTRIGAADDLVSGQSTFMVEMTETRQAVTEATSNSLILLDEIGRGTSTYDG 686
Query: 754 FGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
LA AI E++ I A TLF+TH+HELT L + + N HV A I+
Sbjct: 687 MALAQAIVEYIASSIGAKTLFSTHYHELTVL---------EDSIPSLENVHVRA-IERDG 736
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
R + L++V PG D+S+GIHVAE A P+S++ AR +ELE
Sbjct: 737 R-VVFLHEVHPGRADKSYGIHVAELAELPDSLIDRARTILSELE 779
>gi|229197880|ref|ZP_04324596.1| DNA mismatch repair protein mutS [Bacillus cereus m1293]
gi|228585598|gb|EEK43700.1| DNA mismatch repair protein mutS [Bacillus cereus m1293]
Length = 886
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|146319777|ref|YP_001199489.1| DNA mismatch repair protein MutS [Streptococcus suis 05ZYH33]
gi|145690583|gb|ABP91089.1| Mismatch repair ATPase (MutS family) [Streptococcus suis 05ZYH33]
Length = 726
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 216/687 (31%), Positives = 351/687 (51%), Gaps = 79/687 (11%)
Query: 202 SSECKTLRDALTR---CGVMLTERKKTEFKTR-DLVQDLDRLVRGSVEPVRDLVSGFEIA 257
+S C +R+ R G L+E ++ F + +L+ + V V+ + + ++ E A
Sbjct: 39 TSLCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA 98
Query: 258 PGALGALLSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
A G LLSY + D S+ + Y + Y+++D A +L++LE+ K+ S
Sbjct: 99 --AAGKLLSYLHRTQMRDLSHLQK--VVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGS 154
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L+ L++ T TA MG RLL W+ +PL+D+ I R +VQ F+D R DL + LK +
Sbjct: 155 LYWLLDETKTA-MGMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVEALKGVY 213
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLT 434
DIERL + + + +++L Q+ +P I++ LQQ E +L+ LDP+ L
Sbjct: 214 DIERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAG--LDPIPELH 271
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALK----------NEQESLE 481
AL+ +++D + + +G +I + +D L + E E+ E
Sbjct: 272 ---------ALISSAIDPEAQGTITDGN-IIRTGFDETLDQYRLVMREGAGWIAEIEAKE 321
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
R+ ++ LK+D + G+ F +T + F T K+
Sbjct: 322 REASGINN-------------LKIDYNKKDGYYFHVTNSNLGNV----PDHFFRKATLKN 364
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
++ +L K+ Q + ++ N + E+ R+ Q + + LA ++ +DVL +
Sbjct: 365 SERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQA 424
Query: 602 FADLASS----CPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKS 656
FA +A CP +T D ++ ++ RH VE +IPN L +
Sbjct: 425 FAVVAEQQHLVCPR-FT-------DQRELTIDRGRHAVVEKVMGKQTYIPNSIHL-NTDT 475
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
Q+ITGPNM GKST++RQ+ V ++MAQ+GS+VP D+A + + D IF R+GA D + G
Sbjct: 476 HMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRIGAADDLVSGQ 535
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM+E ++ ATDRSLI+ DELGRGT+TYDG LA +I E++ ++I A TLFAT
Sbjct: 536 STFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHDKIGAKTLFAT 595
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L ++ + + N HVS ++T L+K+ G D+S+GIHVA
Sbjct: 596 HYHELTDL---------SQTLEHLENVHVSTL--EKDGQVTFLHKIAQGPADKSYGIHVA 644
Query: 837 EFANFPESVVTLAREKAAELEDFTPSA 863
+ A PE ++ A LE+ P+A
Sbjct: 645 KIAGMPEELLQRADRILQTLENQAPTA 671
>gi|229092807|ref|ZP_04223945.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-42]
gi|228690605|gb|EEL44386.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-42]
Length = 882
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|229157348|ref|ZP_04285426.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 4342]
gi|228626075|gb|EEK82824.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 4342]
Length = 886
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|30263775|ref|NP_846152.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Ames]
gi|47529195|ref|YP_020544.1| DNA mismatch repair protein MutS [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186619|ref|YP_029871.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Sterne]
gi|165872427|ref|ZP_02217062.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0488]
gi|167635842|ref|ZP_02394151.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0442]
gi|167639793|ref|ZP_02398062.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0193]
gi|170687825|ref|ZP_02879039.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0465]
gi|170706805|ref|ZP_02897263.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0389]
gi|177652141|ref|ZP_02934687.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0174]
gi|190568426|ref|ZP_03021333.1| DNA mismatch repair protein MutS [Bacillus anthracis str.
Tsiankovskii-I]
gi|196038192|ref|ZP_03105501.1| DNA mismatch repair protein MutS [Bacillus cereus NVH0597-99]
gi|227813323|ref|YP_002813332.1| DNA mismatch repair protein MutS [Bacillus anthracis str. CDC 684]
gi|229601639|ref|YP_002868011.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0248]
gi|254683522|ref|ZP_05147382.1| DNA mismatch repair protein MutS [Bacillus anthracis str.
CNEVA-9066]
gi|254722043|ref|ZP_05183832.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A1055]
gi|254735809|ref|ZP_05193515.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Western
North America USA6153]
gi|254739665|ref|ZP_05197359.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Kruger B]
gi|254751061|ref|ZP_05203100.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Vollum]
gi|254759379|ref|ZP_05211404.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Australia
94]
gi|421507311|ref|ZP_15954231.1| DNA mismatch repair protein MutS [Bacillus anthracis str. UR-1]
gi|421639524|ref|ZP_16080115.1| DNA mismatch repair protein MutS [Bacillus anthracis str. BF1]
gi|44888189|sp|Q81WR3.1|MUTS_BACAN RecName: Full=DNA mismatch repair protein MutS
gi|254766612|sp|C3P5H5.1|MUTS_BACAA RecName: Full=DNA mismatch repair protein MutS
gi|254766613|sp|C3L822.1|MUTS_BACAC RecName: Full=DNA mismatch repair protein MutS
gi|30258419|gb|AAP27638.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Ames]
gi|47504343|gb|AAT33019.1| DNA mismatch repair protein MutS [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180546|gb|AAT55922.1| DNA mismatch repair protein MutS [Bacillus anthracis str. Sterne]
gi|164711865|gb|EDR17407.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0488]
gi|167512194|gb|EDR87571.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0193]
gi|167528799|gb|EDR91557.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0442]
gi|170128223|gb|EDS97092.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0389]
gi|170668141|gb|EDT18890.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0465]
gi|172082510|gb|EDT67575.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0174]
gi|190560430|gb|EDV14408.1| DNA mismatch repair protein MutS [Bacillus anthracis str.
Tsiankovskii-I]
gi|196030600|gb|EDX69198.1| DNA mismatch repair protein MutS [Bacillus cereus NVH0597-99]
gi|227007689|gb|ACP17432.1| DNA mismatch repair protein MutS [Bacillus anthracis str. CDC 684]
gi|229266047|gb|ACQ47684.1| DNA mismatch repair protein MutS [Bacillus anthracis str. A0248]
gi|401822445|gb|EJT21595.1| DNA mismatch repair protein MutS [Bacillus anthracis str. UR-1]
gi|403393189|gb|EJY90434.1| DNA mismatch repair protein MutS [Bacillus anthracis str. BF1]
Length = 892
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|373857376|ref|ZP_09600118.1| DNA mismatch repair protein MutS [Bacillus sp. 1NLA3E]
gi|372453026|gb|EHP26495.1| DNA mismatch repair protein MutS [Bacillus sp. 1NLA3E]
Length = 881
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 308/578 (53%), Gaps = 32/578 (5%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y + YM++D + R L + E+ K SL L++ T TA MG RLL W+ +PL
Sbjct: 245 VSQYEVQHYMKIDYYSKRNLELTETIRSKGKKGSLIWLLDETKTA-MGGRLLKQWIDRPL 303
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+D +EI R +V+ F+ RQDLR+ L + D+ERL + + +V+L +S
Sbjct: 304 IDRDEIQHRHSLVETFLAHYFERQDLREKLTEVYDLERLSGRVAFGNVNARDLVQLKRSL 363
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
++P I+ + + + + + E+ LDP E +TD L + ALVE L+ G +
Sbjct: 364 WQIPGIKQLIGELPNETAVALAEQ-LDPCEDVTD--LLER--ALVENPPI--SLKEGN-I 415
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y L ++ + + I L +Q + K+LK+ FG+ IT+
Sbjct: 416 IQDGYHEELDRYRDASRNGKTWIAQLERQEREKTGI---KSLKIGYNRVFGYYIEITRAN 472
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
++ L + +T + +F +LK+ + + E+ + +L + + +
Sbjct: 473 LHLLQDDLYER---KQTLSNAERFITPELKEKEELILQAEEKIVELEYQLFSEIRERIKE 529
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQD 640
+ ++LA +SELDVL FA ++ + Y +P + D I ++ RHP VE +
Sbjct: 530 YIPHLQALAKRISELDVLQCFATISEN--RHYVKPLFS--DERRIFIKEGRHPVVEKVMN 585
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
++PNDC + R + +ITGPNM GKST++RQV + ++AQ+G +VP A + + D
Sbjct: 586 AQEYVPNDCHMDRDREIL-LITGPNMSGKSTYMRQVALTAILAQIGCYVPATEAVLPIFD 644
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTSTYDG LA A+
Sbjct: 645 QVFTRIGAADDLISGQSTFMVEMLEAKNAITNATQASLILFDEIGRGTSTYDGMALAQAM 704
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E++ I A TLF+TH+HELT L E + + N HVSA I+ K+ L+
Sbjct: 705 TEYIHNRIGAKTLFSTHYHELTVLDEE---------LNRLKNVHVSA-IEQNG-KVVFLH 753
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
K++ GA D+S+GIHVAE A P+ V+ A E LED
Sbjct: 754 KIKEGAADKSYGIHVAELAELPKEVIRRANEILHALED 791
>gi|423574624|ref|ZP_17550743.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-D12]
gi|401212149|gb|EJR18895.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-D12]
Length = 892
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|402572919|ref|YP_006622262.1| DNA mismatch repair protein MutS [Desulfosporosinus meridiei DSM
13257]
gi|402254116|gb|AFQ44391.1| DNA mismatch repair protein MutS [Desulfosporosinus meridiei DSM
13257]
Length = 850
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 241/787 (30%), Positives = 375/787 (47%), Gaps = 91/787 (11%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
GL ++DL+ G H + + + + E LL E K+ + +
Sbjct: 133 GLAFLDLST---GEFTVFQTPHLDVLLAEIARINPAELLLTPELSKNPK--------SWV 181
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYA-ELLSDE 274
T R++T FKT + R L + F IA A L SY E +
Sbjct: 182 QYYCTVREQTTFKTPAM--------REHFHSQEGLFTEFPIAAFAATGLWSYLLETMPGV 233
Query: 275 SNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
I+ Y + +M LD R L + ES K +L +++ T TA G RLL
Sbjct: 234 DPTHIVEIKTYRSERWMFLDQWTRRNLELTESLRGIGKKGTLLSVLDATHTA-FGGRLLR 292
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQI 394
W+ +PLL +EI RL+ ++ + D LR+DL++ L + D+ERLM + A + +
Sbjct: 293 HWIDKPLLKQDEIEGRLNSIEELIADAFLRKDLQKLLSEVYDLERLMGKVSYGTANAKDL 352
Query: 395 VKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIA---------- 444
+ L Q+ LP I + + + + +K LD L S ++ L K I
Sbjct: 353 LLLTQTLALLPDISTIITSSTAE-TLKVKVPKLDGLGSFVEN--LQKAINPNPPLSLREG 409
Query: 445 -LVET--SVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDK 501
L++T S ++D+L +ISS L+ L+N ER+ + +
Sbjct: 410 NLIKTGYSQEVDELR----IISSGGKEWLAQLENA----ERERTGI-------------R 448
Query: 502 ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
+LK+ FG+ IT + + +T + +F +LK+ +
Sbjct: 449 SLKIGYNKVFGYYIEITHANAHLVPGDYQRK----QTLSNAERFITPELKEYELKIIGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
E+ K+ + EL+ + + ++ S+A +L+E+DV +S A++A + Y RP I
Sbjct: 505 EKLKDLEYELLLALREQVRANAKKIISVAQVLAEIDVFVSLAEVAVN--NHYVRPQIKTD 562
Query: 622 DVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
G I + RHP VE + F+PND L+ +ITGPNM GKST++RQV + +
Sbjct: 563 --GQIQITEGRHPVVEKMIEQGTFVPNDT-LMSENQHLALITGPNMAGKSTYMRQVALIV 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
LMA +GSFVP +A+I++ D IF RVGA D G STFM EM E A ILK A+ SLII
Sbjct: 620 LMAHIGSFVPAKKANIALVDRIFTRVGASDDLAAGQSTFMVEMHEVAHILKYASRNSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMV 798
+DE+GRGT+TYDG +AWA+ EHLV+ + TLFATH+HELT L
Sbjct: 680 LDEIGRGTATYDGLSIAWAVSEHLVQNPQFTPKTLFATHYHELTQL---------QDNFP 730
Query: 799 GVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
G+ N HV + + L+K+ PG D+S+GI VA A P+ ++ A+ ELE
Sbjct: 731 GLVNLHVG--VKERGEDIVFLHKILPGRADRSYGIQVARLAGLPQELIIRAKALLLELES 788
Query: 859 FTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVK 918
P V + D EV ++ P + H L+E +PLE M ++AL+ +
Sbjct: 789 SEP--VHASDKSAEVITQFSLFDVP--------KVHPLLQEIEKLPLEDMTARQALQYLF 838
Query: 919 RMKDDLE 925
+++ ++
Sbjct: 839 DLRERIQ 845
>gi|42782853|ref|NP_980100.1| DNA mismatch repair protein MutS [Bacillus cereus ATCC 10987]
gi|222097215|ref|YP_002531272.1| DNA mismatch repair protein muts [Bacillus cereus Q1]
gi|48428286|sp|P61665.1|MUTS_BACC1 RecName: Full=DNA mismatch repair protein MutS
gi|254766615|sp|B9IV59.1|MUTS_BACCQ RecName: Full=DNA mismatch repair protein MutS
gi|42738780|gb|AAS42708.1| DNA mismatch repair protein MutS [Bacillus cereus ATCC 10987]
gi|221241273|gb|ACM13983.1| DNA mismatch repair protein MutS [Bacillus cereus Q1]
Length = 892
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|449108419|ref|ZP_21745062.1| DNA mismatch repair protein mutS [Treponema denticola ATCC 33520]
gi|448961500|gb|EMB42201.1| DNA mismatch repair protein mutS [Treponema denticola ATCC 33520]
Length = 884
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 321/647 (49%), Gaps = 60/647 (9%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E+ P G LL Y E +S I+ Y+ ++ LD + + L +L + D + ++
Sbjct: 235 EVPPA--GLLLQYLEEISGRDISHISGIKIYAESDFVSLDDSTRKNLELLTNLRDNSPSY 292
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SLF +N T TA MG RLL + PL EI+ RLD V + D +R+ L I
Sbjct: 293 SLFESVNYTKTA-MGTRLLRRRISYPLRSKKEIDKRLDKVNSLFKDGKASAIIRETLSSI 351
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
DIERL + ++ + ++ L QS + S ++ +SLI+E+ L+ L+ L+
Sbjct: 352 LDIERLSGRIAMQKTHGKDLLALKQS------LNSVIR-----MASLIEEKKLNFLQ-LS 399
Query: 435 DDDH--LNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHS 486
D++ L + L+E S+D D L +G+ + S DT + +N E LE+ +
Sbjct: 400 DEEKKLLTEIRDLLENSIDDDCSIALNDGKLIKKGFSKKVDTIKNIKENAHEILEKYLDD 459
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
K+T + LK+ G+ ++ + FI + + +FT
Sbjct: 460 ERKKTGIN-------NLKIKYNRMMGYFLEVSLGNISAV----PDYFIRQRSLSNADRFT 508
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK++ D E +KE+ + V + + LA ++ELDV SFA A
Sbjct: 509 TESLKQIEDNINNSEERLIEAEKEVFDEVCTEIGSHHCFLQKLAEEVAELDVNQSFAQAA 568
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSW-------- 657
+TRP++ D G + + G RHP VE +F+PN KL+ G++
Sbjct: 569 --VLHAWTRPELCG-DSGILNITGGRHPVVENHLRAGDFVPNSIKLLSGENSNSEDETIP 625
Query: 658 -FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKSTF+RQ + L+AQ+GSFVP ++A +S D IF RVGA D RG
Sbjct: 626 SFAVITGPNMAGKSTFLRQTALICLLAQIGSFVPAEKAVLSPVDKIFCRVGATDNLARGE 685
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STF+ EM+ETA IL AT SL+I+DE+GRGTS DG +A A+ EHL+ I+A TLFAT
Sbjct: 686 STFLVEMIETAYILNSATRNSLVIMDEVGRGTSMEDGLAIAQAVSEHLLNTIKAKTLFAT 745
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L HE ++ + K+ L KV PGA S+GIHVA
Sbjct: 746 HYHELTRLEHEKI-------------INLKLDVLEAEGKIVFLKKVVPGAAGNSYGIHVA 792
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
A P+SV+T A F I + + GS+ K S P
Sbjct: 793 GLAGIPQSVLTRAENLLYMRSQFQKERTIQEASPSAQGSEEKTPSSP 839
>gi|449116841|ref|ZP_21753287.1| DNA mismatch repair protein mutS [Treponema denticola H-22]
gi|448953096|gb|EMB33892.1| DNA mismatch repair protein mutS [Treponema denticola H-22]
Length = 884
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 320/647 (49%), Gaps = 60/647 (9%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E+ P G LL Y E +S I+ Y+ ++ LD + + L +L + D + ++
Sbjct: 235 EVPPA--GLLLQYLEEISGRDISHISGIKIYAESDFVSLDDSTRKNLELLTNLRDNSPSY 292
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SLF +N T TA MG RLL + PL EI+ RLD V + D +R+ L I
Sbjct: 293 SLFESVNYTKTA-MGTRLLRRRISYPLRSKKEIDKRLDKVNSLFKDGKASAIIRETLSSI 351
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
DIERL + ++ + ++ L QS + S ++ SLI+E+ L+ L+ L+
Sbjct: 352 LDIERLSGRIAMQKTHGKDLLALKQS------LNSVIR-----MGSLIEEKKLNFLQ-LS 399
Query: 435 DDDH--LNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHS 486
D++ L + L+E S+D D L +G+ + S DT + +N E LE+ +
Sbjct: 400 DEEKKLLTEIRDLLENSIDDDCSIALNDGKLIKKGFSKKVDTIKNIKENAHEILEKYLDD 459
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
K+T + LK+ G+ ++ + FI + + +FT
Sbjct: 460 ERKKTGIN-------NLKIKYNRMMGYFLEVSLGNISAV----PDYFIRQRSLSNADRFT 508
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK++ D E +KE+ + V + + LA ++ELDV SFA A
Sbjct: 509 TESLKQIEDNINNSEERLIEAEKEVFDEVCTKIGSHHCFLQKLAEEVAELDVNQSFAQAA 568
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSW-------- 657
+TRP++ D G + + G RHP VE +F+PN KL+ G++
Sbjct: 569 --VLHAWTRPEL-CGDSGILNITGGRHPVVENHLRAGDFVPNSIKLLSGENTNSEDETIP 625
Query: 658 -FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKSTF+RQ + L+AQ+GSFVP ++A +S D IF RVGA D RG
Sbjct: 626 SFAVITGPNMAGKSTFLRQTALICLLAQIGSFVPAEKAVLSPVDKIFCRVGATDNLARGE 685
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STF+ EM+ETA IL AT SL+I+DE+GRGTS DG +A A+ EHL+ I+A TLFAT
Sbjct: 686 STFLVEMIETAYILNSATRNSLVIMDEVGRGTSMEDGLAIAQAVSEHLLNTIKAKTLFAT 745
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L HE ++ + K+ L KV PGA S+GIHVA
Sbjct: 746 HYHELTRLEHEKI-------------INLKLDVLEAEGKIVFLKKVVPGAAGNSYGIHVA 792
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
A P+SV+T A F I + + GS+ K S P
Sbjct: 793 GLAGIPQSVLTRAENLLYMRSQFQKERTIQEASSSAQGSEEKTPSSP 839
>gi|229098238|ref|ZP_04229185.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-29]
gi|229117255|ref|ZP_04246633.1| DNA mismatch repair protein mutS [Bacillus cereus Rock1-3]
gi|228666155|gb|EEL21619.1| DNA mismatch repair protein mutS [Bacillus cereus Rock1-3]
gi|228685136|gb|EEL39067.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-29]
Length = 884
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+LL NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLLKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|229174434|ref|ZP_04301966.1| DNA mismatch repair protein mutS [Bacillus cereus MM3]
gi|228608994|gb|EEK66284.1| DNA mismatch repair protein mutS [Bacillus cereus MM3]
Length = 884
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L + + + N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VLE---------ESLGQLKNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|423401404|ref|ZP_17378577.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-2]
gi|423477891|ref|ZP_17454606.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6X1-1]
gi|401654394|gb|EJS71937.1| DNA mismatch repair protein mutS [Bacillus cereus BAG2X1-2]
gi|402428816|gb|EJV60908.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6X1-1]
Length = 890
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLASLPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L + + + N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VLE---------ESLGQLKNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|418296833|ref|ZP_12908676.1| DNA mismatch repair protein MutS [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539008|gb|EHH08250.1| DNA mismatch repair protein MutS [Agrobacterium tumefaciens
CCNWGS0286]
Length = 904
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 218/665 (32%), Positives = 330/665 (49%), Gaps = 64/665 (9%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+ S S + +D A L ++++ + ++ SL +NRT T G G RLL L PL D
Sbjct: 281 RESAASTLFIDPATRANLELVKTLS-GERDGSLLHALNRTVTGG-GARLLAERLMSPLTD 338
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+INARLD V +DD +L LR LK+++D+ R + L R G +
Sbjct: 339 PEKINARLDAVAYLIDDVSLSDGLRDALKQVADMPRALSRLALERGGPRD---------- 388
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV------DLDQLEN 457
L IR L E + ++++ + L P E T L + +E + DL L+
Sbjct: 389 LGAIRQGLASAE-RIAAILDQGLL-PDELATALADLKALPSGLEAMLGSMLADDLPLLKR 446
Query: 458 GEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
+ + L ++ ++ R I L + A + + K+LK+ G+ +
Sbjct: 447 DGGFLRDGANPELDEVRALRDQSRRVIAGLQLKYADETGI---KSLKIKHNNVLGYFIEV 503
Query: 518 TKKEEPKIRK--KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
T + + +FI +T ++FT T+L L + + + E R+
Sbjct: 504 TAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAQALTMELEAFARM 563
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
++ V +E K+ A L+ +DV S A LA+ Y RP ++ ++G RHP
Sbjct: 564 VEAVVQQAEAIKAGAFALATIDVASSLAYLATE--QAYCRPIVDASMT--FAIKGGRHPV 619
Query: 636 VEA----QDWVNFIPNDCKLI------RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQV 685
VE Q FI N+C L G W ++TGPNMGGKSTF+RQ + ++AQ+
Sbjct: 620 VEQALRRQSAGPFIANNCDLSAVNGGKNGAIW--LLTGPNMGGKSTFLRQNALITILAQI 677
Query: 686 GSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELG 745
GSFVP + A I V D +F+RVGA D RG STFM EM+ETA+IL ATDRSL+I+DE+G
Sbjct: 678 GSFVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIG 737
Query: 746 RGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
RGT+T+DG +AWA EHL E R LFATHFHELT L+ E + M
Sbjct: 738 RGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLS-EKLGRLSNATM-------- 788
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---TPS 862
+ + L++V PGA D+S+GI VA A P SVV ARE +LED P+
Sbjct: 789 --RVKEWEGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPA 846
Query: 863 AVISDDAKI-EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMK 921
+ + DD + ++ +R+ G+++ + LK F+ + M +EAL+ + +K
Sbjct: 847 SQLIDDLPLFQIAVRREETRKA-----GSSKVEEALKGFNP---DEMTPREALDALYALK 898
Query: 922 DDLEK 926
+L K
Sbjct: 899 KELGK 903
>gi|228902272|ref|ZP_04066432.1| DNA mismatch repair protein mutS [Bacillus thuringiensis IBL 4222]
gi|228857387|gb|EEN01887.1| DNA mismatch repair protein mutS [Bacillus thuringiensis IBL 4222]
Length = 886
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQS-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|402556108|ref|YP_006597379.1| DNA mismatch repair protein MutS [Bacillus cereus FRI-35]
gi|401797318|gb|AFQ11177.1| DNA mismatch repair protein MutS [Bacillus cereus FRI-35]
Length = 892
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|423418322|ref|ZP_17395411.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3X2-1]
gi|401106595|gb|EJQ14556.1| DNA mismatch repair protein mutS [Bacillus cereus BAG3X2-1]
Length = 890
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L + + + N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VLE---------ESLGQLKNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|218904897|ref|YP_002452731.1| DNA mismatch repair protein MutS [Bacillus cereus AH820]
gi|226723050|sp|B7JJ47.1|MUTS_BACC0 RecName: Full=DNA mismatch repair protein MutS
gi|218535511|gb|ACK87909.1| DNA mismatch repair protein MutS [Bacillus cereus AH820]
Length = 892
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|75760974|ref|ZP_00740980.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491538|gb|EAO54748.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 803
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 126 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 185
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 186 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 244
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 245 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQSA-DPCE 303
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 304 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 353
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 354 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 402
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 403 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 462
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 463 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 517
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 518 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 577
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 578 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 637
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 638 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 686
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 687 DSLIARAKEVLAQLE 701
>gi|333978769|ref|YP_004516714.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822250|gb|AEG14913.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
Length = 868
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 231/771 (29%), Positives = 353/771 (45%), Gaps = 60/771 (7%)
Query: 150 ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLR 209
E G GL VD+T + + + + L+ L E LLP + ++
Sbjct: 130 EKGNAYGLAVVDVTTGLFMVTQIDGRDALLD---ELIRLEPAEVLLPDIPLYRELAGAVK 186
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDL-DRLVRGSVEPVRDLVSGFEIAPGALGALLSYA 268
L + +++ F+ + V+ L ++L G R +SG +A G +L+Y
Sbjct: 187 SRLPKA--VISFWSPAAFERGEAVRSLQEQLGTGWT---RSGLSGLPLAILCAGGMLNYL 241
Query: 269 ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGM 328
+ + YS YM LD R L + S D ++ +L +++ T TA M
Sbjct: 242 KATQKRELGQINRVEIYSGGQYMHLDGVTRRNLELTSSLRDGSRWGTLLWVLDHTVTA-M 300
Query: 329 GKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRR 388
G RLL WL++PLLDV I AR D V+ V+D+ RQ+L+ LK I D+ERL +
Sbjct: 301 GGRLLKSWLERPLLDVQAIRARQDAVEELVNDSLARQELQHLLKTIYDLERLSSRVVYGT 360
Query: 389 AGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVET 448
AG + ++ L S LP ++ L + E D D L + L++
Sbjct: 361 AGPRDLLALKNSLAVLPKVKKVLCNKKAPLWQ----------EIAGDLDCLEDVVQLLDE 410
Query: 449 SVDLD----QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALK 504
++D D E G +I Y + L+ + + L + + ++LK
Sbjct: 411 AIDADPPAGSREGG--IIREGYHPEVDRLRQASREGKNWLAQLEAREKERTGI---RSLK 465
Query: 505 LDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEY 564
+ FG+ +T+ P + + +I +T +F +LK+L +Q E
Sbjct: 466 VGFNKVFGYYLEVTR---PNL-DLVPADYIRKQTLAGAERFITPELKELEEQILGAEERL 521
Query: 565 KNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG 624
+ L + + + A ++ D LLS A+ ++ Y RP++N D
Sbjct: 522 VQLEYRLFTEIREKVAAQVRRIQQAAGAVARTDALLSLAE--AAVKGNYVRPEVN--DGS 577
Query: 625 DIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMA 683
I + RHP VE + F+PND L G + ++TGPNM GKST++RQV + +LMA
Sbjct: 578 RITIREGRHPVVEQVLEPGEFVPNDVDL-GGDTRLILLTGPNMAGKSTYMRQVALLVLMA 636
Query: 684 QVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDE 743
QVGSF+P I + D IF RVGA D G STFM EM E I+ AT RSLII+DE
Sbjct: 637 QVGSFIPAASGEIGIVDRIFTRVGASDDLAAGQSTFMVEMSECQVIVSAATPRSLIIMDE 696
Query: 744 LGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANY 803
+GRGTSTYDG +A A+ E++V I A TLF+TH+HELT L + GV N+
Sbjct: 697 VGRGTSTYDGISIARALVEYIVRRIGARTLFSTHYHELTEL----------DVLPGVKNF 746
Query: 804 HVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSA 863
V+ ++ + L +V PG D+S+GI VA A P ++ A E ELE
Sbjct: 747 TVA--VEERGEDVVFLRRVRPGRADRSYGIQVARLAGLPGEILQRAEEILHELEYRRDGG 804
Query: 864 VISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEAL 914
+S + + ++ + P H L E + L M EAL
Sbjct: 805 AVSPAPRDLPAHREEKTAVPK---------HPILDELVKLDLWQMTPLEAL 846
>gi|402558903|ref|YP_006601627.1| DNA mismatch repair protein MutS [Bacillus thuringiensis HD-771]
gi|423359245|ref|ZP_17336748.1| DNA mismatch repair protein mutS [Bacillus cereus VD022]
gi|401085117|gb|EJP93363.1| DNA mismatch repair protein mutS [Bacillus cereus VD022]
gi|401787555|gb|AFQ13594.1| DNA mismatch repair protein MutS [Bacillus thuringiensis HD-771]
Length = 892
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYLIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|228966712|ref|ZP_04127756.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228792811|gb|EEM40369.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 793
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 116 VSQAKLIKAIGRLFNYLIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 175
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 176 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 234
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 235 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQGA-DPCE 293
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 294 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 343
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 344 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 392
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 393 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 452
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 453 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 507
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 508 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 567
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 568 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 627
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 628 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 676
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 677 DSLIARAKEVLAQLE 691
>gi|218898869|ref|YP_002447280.1| DNA mismatch repair protein MutS [Bacillus cereus G9842]
gi|226723051|sp|B7ITM1.1|MUTS_BACC2 RecName: Full=DNA mismatch repair protein MutS
gi|218542997|gb|ACK95391.1| DNA mismatch repair protein MutS [Bacillus cereus G9842]
Length = 892
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|423561823|ref|ZP_17538099.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-A1]
gi|401202080|gb|EJR08945.1| DNA mismatch repair protein mutS [Bacillus cereus MSX-A1]
Length = 892
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|298293958|ref|YP_003695897.1| DNA mismatch repair protein MutS [Starkeya novella DSM 506]
gi|296930469|gb|ADH91278.1| DNA mismatch repair protein MutS [Starkeya novella DSM 506]
Length = 930
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/607 (32%), Positives = 307/607 (50%), Gaps = 46/607 (7%)
Query: 279 NYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLK 338
N R+ + D+ M +D A L +L + T ++ SL ++RT T+ G RLL L
Sbjct: 298 NRPQREAAADA-MVIDPATRANLEILRTTT-GDRAGSLCASVDRTVTSA-GARLLSRRLA 354
Query: 339 QPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLY 398
+PL D I ARLD V+ VD+TALR LR L D+ R + + R+G + + +
Sbjct: 355 EPLTDPFRIAARLDAVEHLVDETALRAQLRDRLAGAPDLARALSRVALGRSGPRDLAAIG 414
Query: 399 QSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENG 458
+ I + + R L + D A ++ + L++ + G
Sbjct: 415 RGLTEGATISALIAASPAPAELAEAARIL----ASVDPTLAAMLGAALDDELPLNRRDGG 470
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
Y L A + ++ R + +L ++ + + +ALK+ G+ ++
Sbjct: 471 --FTRPGYSEELDATRALRDESRRVVAALERRYVEETGV---RALKIRHNAVLGYFVEVS 525
Query: 519 KKEEPKIRKK-LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQ 577
++ ++R+ F+ +T ++FT+T+L +L + E ++ + + +
Sbjct: 526 QQNADRLREPPFDAVFMHRQTMAGAMRFTSTELAELEAKIASAGERALALEQRIFDELAA 585
Query: 578 TAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE 637
+T SE ++ A L+ +DV A LA + RPD++ D D ++EG RHP VE
Sbjct: 586 AVLTHSEAIRACAEALAVIDVTAGLAKLA--VDETHVRPDVH--DGLDFLIEGGRHPVVE 641
Query: 638 A---QDWVNFIPNDCKL----------IRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
+D F+ NDC+L G+ W ++TGPNM GKSTF+RQ + ++AQ
Sbjct: 642 QALRRDGGPFVANDCELSPPEAANRGSTSGRIW--LVTGPNMAGKSTFLRQNALIAILAQ 699
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
G+FVP A I V D +F+RVGA D RG STFM EM+ETA+IL AT+RSL+I+DE+
Sbjct: 700 AGAFVPARLAKIGVVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQATERSLVILDEI 759
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGT+T+DG +AWA EHL E R LFATHFHELTAL+ A N
Sbjct: 760 GRGTATFDGLSIAWASLEHLHEVNRCRGLFATHFHELTALSQRLARLVNA---------- 809
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED---FTP 861
+ + ++ L++V PGA D+S+GI VA+ A P +VV+ AR ELE+ P
Sbjct: 810 -TVKVKEWEGEVIFLHEVVPGAADRSYGIQVAKLAGLPPAVVSRARAVLTELENADRAAP 868
Query: 862 SAVISDD 868
+ I DD
Sbjct: 869 AQRILDD 875
>gi|253733467|ref|ZP_04867632.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|417898431|ref|ZP_12542351.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21259]
gi|253728521|gb|EES97250.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
TCH130]
gi|341848464|gb|EGS89627.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21259]
Length = 872
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 313/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|196044558|ref|ZP_03111793.1| DNA mismatch repair protein MutS [Bacillus cereus 03BB108]
gi|225865750|ref|YP_002751128.1| DNA mismatch repair protein MutS [Bacillus cereus 03BB102]
gi|376267662|ref|YP_005120374.1| DNA mismatch repair protein MutS [Bacillus cereus F837/76]
gi|254766614|sp|C1ENZ3.1|MUTS_BACC3 RecName: Full=DNA mismatch repair protein MutS
gi|196024593|gb|EDX63265.1| DNA mismatch repair protein MutS [Bacillus cereus 03BB108]
gi|225787987|gb|ACO28204.1| DNA mismatch repair protein MutS [Bacillus cereus 03BB102]
gi|364513462|gb|AEW56861.1| DNA mismatch repair protein MutS [Bacillus cereus F837/76]
Length = 890
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|228986913|ref|ZP_04147040.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772862|gb|EEM21301.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 886
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|297565946|ref|YP_003684918.1| DNA mismatch repair protein MutS [Meiothermus silvanus DSM 9946]
gi|296850395|gb|ADH63410.1| DNA mismatch repair protein MutS [Meiothermus silvanus DSM 9946]
Length = 848
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 303/603 (50%), Gaps = 40/603 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE-----SKTDANKNF 314
A GA+L+YA + +Y +YM+L +R L V + S +
Sbjct: 233 AAGAVLAYARTTQAGALPQVRGFARYDPSAYMQLSETTLRTLEVYDPSPVGSYLPVGEER 292
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
+L G++ T TA G+RLL WL+QPLLD I ARLD V+A V D+ LR+ +R+ L RI
Sbjct: 293 TLMGVLGLTRTAP-GRRLLKAWLRQPLLDEGPIQARLDAVEALVRDSVLREAVRRLLYRI 351
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
D+ERL L R+ + + L +S LP + +GQ + R L L
Sbjct: 352 HDLERLAARLAAGRSNARDLAALARSLGLLP-------ELQGQLLACEPLRVLAERLPLL 404
Query: 435 DDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
+ ALVE L E G +I +D L A + E+ I L S
Sbjct: 405 AEVVERISAALVEEP-PLKITEGG--LIKDGFDATLDAHRERAEAGRSWIAGLEAAERSR 461
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLG 554
+P +LK+ G+ +T+ ++ + + ++ T KD ++T L++
Sbjct: 462 TGIP---SLKVGYNQVMGYYLEVTRP----YYAQVPSDWRIVATLKDRQRYTRPDLREKE 514
Query: 555 DQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYT 614
+ E + + E+ + + +E + A +L+ELDV + A++A+ YT
Sbjct: 515 REILLAEEAGRKREYEVFQELREELSGQAERVREAALVLAELDVYATLAEVAARHG--YT 572
Query: 615 RPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
RP +P + + RHP VE FI ND ++ ++ I+TGPNM GKST++R
Sbjct: 573 RPRFSP---DRLFIRAGRHPVVERHLEGRFIANDLEM-GPEARLLILTGPNMSGKSTYLR 628
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q + L+ Q+GSFVP + A + + D I+ R+GA D G STFM EM E A IL+GAT
Sbjct: 629 QTALIALLGQIGSFVPAEEAVLPIFDRIYTRIGAADDIAGGRSTFMVEMEELAQILQGAT 688
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNT 794
RSL+++DE+GRGTSTYDG LAWA E+L + I+A TLFATH+ ELTAL
Sbjct: 689 ARSLVLLDEIGRGTSTYDGLSLAWAASEYLHDRIKALTLFATHYFELTAL---------P 739
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
+ + NYHV+A + L ++V PG +S+G+ VA A P V+ A + A
Sbjct: 740 ETLPAARNYHVAAREEVGG--LVFYHQVLPGPASKSYGLEVARLAGLPPEVLGRAGQLLA 797
Query: 855 ELE 857
LE
Sbjct: 798 GLE 800
>gi|124004833|ref|ZP_01689676.1| DNA mismatch repair protein MutS [Microscilla marina ATCC 23134]
gi|123989511|gb|EAY29057.1| DNA mismatch repair protein MutS [Microscilla marina ATCC 23134]
Length = 814
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 314/623 (50%), Gaps = 56/623 (8%)
Query: 251 VSGFEIAP-----GALGALLSYAELLSDESNYGNYY----IRKYSLDSYMRLDSAAMRAL 301
+ GF IA A GA+L Y E+++ N I + + Y+ LD +R L
Sbjct: 160 LKGFGIADLPEGIAAAGAILHYL----TETHHNNIQHISSIGRIEANRYVWLDKFTIRNL 215
Query: 302 NVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDT 361
+L + + SL +++ T T MG RLL W+ PL D I RL IV++ + D
Sbjct: 216 ELLFPQQE--NGVSLIQVLDNTVTP-MGARLLRKWVALPLKDKQRIEERLSIVESILQDN 272
Query: 362 ALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE-GQFSS 420
L +D+ QHLK+ DIERL+ + RR ++++++ + I+ ++ LQ + QF
Sbjct: 273 DLLEDITQHLKQTGDIERLISKVASRRVKPRELLQIKKGLIQAASLKVILQHHPLPQFQK 332
Query: 421 LIKERYLDPLESLTD--DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQE 478
+ L+ + L D D L L E L++ + ++ D + N ++
Sbjct: 333 FANQ--LNECQFLVDKIDGEL-----LDEPKNVLNEGGLIKPKVNDELDELHEIVYNSKQ 385
Query: 479 SLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLET 538
LE+ ++T ++LKLD FG +T K + ++ K ++I +T
Sbjct: 386 YLEKVREKAIEETGI-------QSLKLDYNKVFGFYLEVTNKYKHQVPK----EWIRKQT 434
Query: 539 RKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDV 598
+ ++ +LK D+ E + +L + ++ A F+ + A +L+ LD
Sbjct: 435 LVNAERYITEELKVYEDKIVHAEERIWELESQLYHELVLQAGDFTNPIQQNARILATLDC 494
Query: 599 LLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKS 656
L+SFA +A YT+P +N I ++ RHP +E Q +IPND L
Sbjct: 495 LVSFAFIARKYN--YTKPTVNEGKA--INIKAGRHPVIERQLLAEEPYIPNDTLLDDEDQ 550
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
+ITGPNM GKS +RQV + LMAQVGSFVP D A I + D IF RVGA D +G
Sbjct: 551 QIMVITGPNMSGKSALLRQVALITLMAQVGSFVPADAADIGIVDKIFTRVGASDNIAKGE 610
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICE--HLVEEIRAPTLF 774
STFM EM+ETASI+ ++RSL+++DE+GRGTSTYDG +AWAI E H + R TLF
Sbjct: 611 STFMVEMMETASIMNNLSERSLVLMDEIGRGTSTYDGISIAWAILEFLHDYRKGRPKTLF 670
Query: 775 ATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIH 834
ATH+HEL LA K M + N+HV+ + K+ + K+ G + SFGIH
Sbjct: 671 ATHYHELNELA---------KDMPRIKNFHVT--VKEVGNKVVFMRKLATGGSEHSFGIH 719
Query: 835 VAEFANFPESVVTLAREKAAELE 857
VA A P +V A + LE
Sbjct: 720 VARMAGMPRRIVLRADDIMHHLE 742
>gi|118478990|ref|YP_896141.1| DNA mismatch repair protein MutS [Bacillus thuringiensis str. Al
Hakam]
gi|166232115|sp|A0RHE1.1|MUTS_BACAH RecName: Full=DNA mismatch repair protein MutS
gi|118418215|gb|ABK86634.1| DNA mismatch repair protein MutS [Bacillus thuringiensis str. Al
Hakam]
Length = 890
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|88195005|ref|YP_499805.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|87202563|gb|ABD30373.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus NCTC 8325]
Length = 840
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 313/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 207 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 265
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 266 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 325
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 326 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 374
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 375 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 421
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 422 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 472
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 473 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 530
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 531 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 587
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 588 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 647
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 648 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 698
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 699 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 753
>gi|384181579|ref|YP_005567341.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324327663|gb|ADY22923.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 892
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|193213813|ref|YP_001995012.1| DNA mismatch repair protein MutS [Chloroherpeton thalassium ATCC
35110]
gi|193087290|gb|ACF12565.1| DNA mismatch repair protein MutS [Chloroherpeton thalassium ATCC
35110]
Length = 880
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 227/722 (31%), Positives = 371/722 (51%), Gaps = 58/722 (8%)
Query: 153 CTIGLGYVDLTKRVLGLAEFLD--DSHFTNVESALVALG-CKECLLPTEAVKSSECKTLR 209
C + +D + + G+A F+D + F E L L + + P E + S + ++ +
Sbjct: 137 CAVHFAEIDRKREISGVA-FIDVTTAEFQVAEVPLSGLKDLLQTVQPAEVIISKKNRSWK 195
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDL-DRLVRGSVEPVRDLVSGF---EIAPGALGA-- 263
D+L + E TE D ++ + G + + GF E + G + A
Sbjct: 196 DSLR--NMTYEELNFTELDEWMFSHDFAEQTLLGQFKT--HSLKGFGVEEFSAGKVAASV 251
Query: 264 LLSYAELLSDESNYGNY-YIRKYS---LDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
+L+Y E E+ G YI+K S ++ LD R L +L + + +L +
Sbjct: 252 ILNYLE----ETQRGKLQYIKKISRFETADHIALDPQTKRNLEILYAMQTGAREGTLIDV 307
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG RLL W+ +P +++I RLD V+ F+ L+ +LR+ K I D+ER
Sbjct: 308 IDKTVTA-MGARLLKKWVGRPSRRMSQIQNRLDAVEVFLTRKDLKANLREAFKSICDMER 366
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
++ + RA ++++ L S ++P ++AL + E + + + L LT++
Sbjct: 367 VLARIATGRANPKEVLSLGGSLAQVPDFKAALLEIETPLVAEL-QNGLTATPELTEE--- 422
Query: 440 NKFIAL-VETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
F A+ ET L N +I Y+ L L++ S + L K A +
Sbjct: 423 -IFRAINPETPATL----NDGNVIREGYNAELDELRSLAGSAKEM---LQKVQADERKKT 474
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
+LK+ FG+ ++K K+ + +T + ++T LK+ ++
Sbjct: 475 GISSLKVQFNRVFGYYIEVSKANSEKVPDYYEKK----QTLVNAERYTIPILKEYEEKIL 530
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
E ++EL + + Q +E ++ A ++ LD L S+A+LA + Y +P+I
Sbjct: 531 TAEERRITLEQELFSALRQRIAEDAETIQADAEHIATLDCLCSYAELAEK--SNYVKPEI 588
Query: 619 NPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
+ DV DI + RHP +E ++ ++PNDC+L ++ QIITGPNM GKS+F+RQV
Sbjct: 589 HENDVIDI--KNGRHPVLEKIMPIDRKYVPNDCRL-DVETRVQIITGPNMSGKSSFLRQV 645
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
G+ +L+AQ GS+VP + ASI + D IF RVGA D G STF+ EM E A+IL T +
Sbjct: 646 GLIVLLAQAGSYVPAESASIGLVDKIFTRVGASDNLAAGESTFLVEMNEAANILNNGTAQ 705
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI++DE+GRGTSTYDG +AWA+ E + + I A TLFATH+HEL L +Q
Sbjct: 706 SLILLDEIGRGTSTYDGMSIAWAMTEFIHDAIGAKTLFATHYHELAEL---------EEQ 756
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+V V N++ A ++ T + L K+ GA D S+GI VA+ A P+ V++ A+ AEL
Sbjct: 757 LVRVKNFN--ATVEETEDTVIFLRKIVRGAADNSYGIEVAKMAGLPDKVISRAKAILAEL 814
Query: 857 ED 858
E+
Sbjct: 815 EE 816
>gi|52141719|ref|YP_085110.1| DNA mismatch repair protein MutS [Bacillus cereus E33L]
gi|81686627|sp|Q636Q7.1|MUTS_BACCZ RecName: Full=DNA mismatch repair protein MutS
gi|51975188|gb|AAU16738.1| DNA mismatch repair protein, MutS family [Bacillus cereus E33L]
Length = 894
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|423458048|ref|ZP_17434845.1| DNA mismatch repair protein mutS [Bacillus cereus BAG5X2-1]
gi|401148432|gb|EJQ55925.1| DNA mismatch repair protein mutS [Bacillus cereus BAG5X2-1]
Length = 890
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYISKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L + + + N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VLE---------ESLGQLKNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|417892208|ref|ZP_12536262.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21201]
gi|341858175|gb|EGS98976.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21201]
Length = 872
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 313/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|424785128|ref|ZP_18211931.1| DNA mismatch repair protein MutS [Staphylococcus aureus CN79]
gi|421956538|gb|EKU08867.1| DNA mismatch repair protein MutS [Staphylococcus aureus CN79]
Length = 840
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 313/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 207 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 265
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 266 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 325
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 326 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 374
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 375 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 421
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 422 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 472
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 473 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 530
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 531 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 587
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 588 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 647
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 648 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 698
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 699 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 753
>gi|228947490|ref|ZP_04109780.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228812010|gb|EEM58341.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 886
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|172087850|emb|CAQ35081.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
Length = 872
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 311/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMVEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|87160655|ref|YP_493885.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|384864522|ref|YP_005749881.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387142903|ref|YP_005731296.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TW20]
gi|418281362|ref|ZP_12894173.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21178]
gi|418875231|ref|ZP_13429491.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418883902|ref|ZP_13438097.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1769]
gi|87126629|gb|ABD21143.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|269940786|emb|CBI49168.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TW20]
gi|312829689|emb|CBX34531.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|365165184|gb|EHM57012.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21178]
gi|377714989|gb|EHT39187.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377770291|gb|EHT94053.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC93]
Length = 840
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 313/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 207 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 265
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 266 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 325
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 326 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 374
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 375 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 421
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 422 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 472
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 473 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 530
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 531 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 587
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 588 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 647
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 648 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 698
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 699 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 753
>gi|385781523|ref|YP_005757694.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 11819-97]
gi|418572156|ref|ZP_13136368.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21333]
gi|364522512|gb|AEW65262.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 11819-97]
gi|371984640|gb|EHP01749.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21333]
Length = 872
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 311/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|254796716|ref|YP_003081552.1| DNA mismatch repair protein MutS [Neorickettsia risticii str.
Illinois]
gi|254589940|gb|ACT69302.1| DNA mismatch repair protein MutS [Neorickettsia risticii str.
Illinois]
Length = 815
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 230/747 (30%), Positives = 376/747 (50%), Gaps = 63/747 (8%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDL-TKRVLGLAE 171
+V+ TPG L ED L + E + + P E IG+ ++D+ TK+++
Sbjct: 110 VVRLVTPGTLT--EDNLLVSGENN---YLFCVAPGKNE----IGIAWLDISTKKIV---- 156
Query: 172 FLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRD 231
+ ++ES LV KE LLP + + S LR + + + +T R F+
Sbjct: 157 -FTSASPASLESYLVKTEPKEVLLP-DTIDSE----LRKLIEQHNIHITRRPNNLFQFEY 210
Query: 232 LVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYM 291
+L D S EI A GAL++YA + ++Y Y+
Sbjct: 211 AENELRGFYNVLQLGFMDARSPCEIV--ACGALIAYARATQMGELKQLEFPKRYERGHYL 268
Query: 292 RLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARL 351
LD++ +R L ++ES+T KN SL ++++TCTAG GKRLL ++ PL+ V EI R
Sbjct: 269 ELDASTVRGLELIESQTPGEKN-SLLQVIDQTCTAG-GKRLLKSYIVSPLISVEEIQTRQ 326
Query: 352 DIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSAL 411
D V+ F LR+ +R L I D ER + + R + + L ++++L
Sbjct: 327 DRVEFFFIQEELRKKVRTELSNIPDAERALSRIALNRGEPIDCLAV------LSCMKASL 380
Query: 412 QQYEGQFSSLIKERYLDPL-ESLTDDDHLNKFI--ALVETSVDLDQLENGEYMISSSYDT 468
E FSS +K+ Y+ + + +D L + + A + TS ++ +G ++ +Y
Sbjct: 381 LLAE-HFSSFLKDDYIRSIYDKCAPNDELMETLRTAFLPTS---NRKVDGPFL-DPTYHP 435
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKK 528
L L + + ++ L + + +LKL K G+ + K P + K
Sbjct: 436 KLLELNMLSTNADVVMNDLLITYKRNTGI---NSLKLGKNNLIGYYVEVPKSA-PVLDSK 491
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+ FI ++ + +++T +L+ L Q K E Y+ + EL + + + K
Sbjct: 492 V---FIHRQSLLNNIRYTTLELQNLEAQIAKANENYRKLELELFRELCEKILASESPLKE 548
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPND 648
+ ++ELDV++SFA++A Y RP ++ + ++ + G RHP VE + F+PND
Sbjct: 549 MIAAMAELDVIVSFAEIAVQ--RKYVRPQVD--NSNELRISGGRHPFVEQVNA--FVPND 602
Query: 649 CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGA 708
+ ++TGPNM GKST++RQ + ++AQ+GSFVP D A I V D +F+R+GA
Sbjct: 603 LAFT-SEERVCVLTGPNMAGKSTYLRQNALITVLAQMGSFVPADSAHIGVVDRVFSRIGA 661
Query: 709 GDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEI 768
D RG STFM EM+ETA+I+ AT RSL+I+DE+GRGTST DG +A A+ E+L + +
Sbjct: 662 SDNIARGKSTFMVEMMETANIVNNATCRSLVILDEVGRGTSTLDGISIAQAVLEYLHDSV 721
Query: 769 RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACD 828
T+FATH++EL L ++ + Y S + ++ ++YKV PG D
Sbjct: 722 NCKTIFATHYNELCDLE---------SKLPRMKCY--SIEVKRWRDEIFLMYKVVPGRGD 770
Query: 829 QSFGIHVAEFANFPESVVTLAREKAAE 855
+S+GIH A + PES++ A E A E
Sbjct: 771 KSYGIHTAMLSGIPESIIRRATEIAKE 797
>gi|253682135|ref|ZP_04862932.1| DNA mismatch repair protein MutS [Clostridium botulinum D str.
1873]
gi|253561847|gb|EES91299.1| DNA mismatch repair protein MutS [Clostridium botulinum D str.
1873]
Length = 895
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 215/661 (32%), Positives = 348/661 (52%), Gaps = 67/661 (10%)
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSD 273
R V LTE+ K F + + S E D+V + G L ++ +
Sbjct: 189 RFDVALTEKSKPFFIENACLNLSKQFSDFSAEDYEDIV--IKGCNGLLNYIIETQKTTLI 246
Query: 274 ESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLL 333
N +YY +++D Y+ +D + R L + E+ D K SL ++++T TA MG RLL
Sbjct: 247 HINKIDYY---HTID-YLSIDINSRRNLELTETLRDKAKKGSLLWVLDKTTTA-MGGRLL 301
Query: 334 HMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQ 393
W++QPL+ + I R + V+ +++ L D+R++L+ + DIERL + + ++
Sbjct: 302 RKWVEQPLIQKDIIEMRQNAVEEIINNVPLCDDIRENLRDVYDIERLAGKISSKNVNAKE 361
Query: 394 IVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY-----LDPLESLTDDDHLNKFIALVET 448
++ L S LP I+S L+ + S+L+K Y LD + SL D+ L
Sbjct: 362 LLSLKNSIGNLPSIKSLLKNFN---SNLLKNIYDNIDCLDDIYSLLDEAIL--------A 410
Query: 449 SVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKG 508
S L E G +I Y++ + L+ + ++ I SL +Q + L K+LK+
Sbjct: 411 SPSLSIKEGG--IIKDGYNSTIDELRMAKSHGKQWIASLEEQERT---LTGIKSLKVKYN 465
Query: 509 TQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEE 563
FG+ ITK ++ + ++I +T + ++ +LK+ LG Q +K++E
Sbjct: 466 KVFGYYIEITKSNLDQVPE---NRYIRKQTLANCERYITPELKEVEEKILGAQ-EKLMEL 521
Query: 564 YKNCQKELVNRVIQTAVTFSEIF--KSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
N E+ N + + EI+ K A ++SE+DVL S A +A Y +P+I
Sbjct: 522 EYNLFIEIRNLIEK------EIYRIKGSAKLISEIDVLTSLAIVA--LENNYCKPEIKT- 572
Query: 622 DVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
G++ ++ RHP VE +D +F+ ND L +ITGPNM GKST++RQV +
Sbjct: 573 -TGELYIKEGRHPVVEKMIPRD--SFVSNDTVLDNKDHQLLLITGPNMAGKSTYMRQVAL 629
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
++AQ+GSFVP +AS+ + D IF R+GA D +G STFM EM E A+IL AT +SL
Sbjct: 630 INVLAQIGSFVPAKKASVVICDKIFTRIGASDDLAKGKSTFMVEMWEVANILNNATSKSL 689
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQ 796
I++DE+GRGTSTYDG +AW++ E++ + +++ TLFATH+HELT+L +
Sbjct: 690 ILLDEVGRGTSTYDGLSIAWSVIEYICKNNNLKSKTLFATHYHELTSLEG---------K 740
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ GV NY ++ + + L K+ G D+S+GI VA+ A P+ V+ A+E L
Sbjct: 741 IQGVKNYSIA--VKKVDDDIIFLRKIIEGGADESYGIEVAKLAGIPKDVIDRAKEILLTL 798
Query: 857 E 857
E
Sbjct: 799 E 799
>gi|301055259|ref|YP_003793470.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|423550481|ref|ZP_17526808.1| DNA mismatch repair protein mutS [Bacillus cereus ISP3191]
gi|300377428|gb|ADK06332.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str.
CI]
gi|401190097|gb|EJQ97147.1| DNA mismatch repair protein mutS [Bacillus cereus ISP3191]
Length = 892
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|225378113|ref|ZP_03755334.1| hypothetical protein ROSEINA2194_03773 [Roseburia inulinivorans DSM
16841]
gi|225210114|gb|EEG92468.1| hypothetical protein ROSEINA2194_03773 [Roseburia inulinivorans DSM
16841]
Length = 822
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 210/633 (33%), Positives = 322/633 (50%), Gaps = 55/633 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
A GALL Y L + N ++ I YS +M +DS+ R L ++E+ + K SL
Sbjct: 230 AAGALLKY--LYETQKNNLDHISAIHPYSTGKFMIIDSSTRRNLELVETMREKQKRGSLL 287
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
++++T TA MG RLL +++QPL+D EI R D + R++LR++L I D+
Sbjct: 288 WVLDKTKTA-MGARLLRSYVEQPLIDKAEIEKRQDAIADINRHMITREELREYLNPIYDL 346
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + A + ++ S LP I++ L+ ++ + L+KE TD D
Sbjct: 347 ERLITRVTYMSANPRDLIAFKNSIGMLPPIKTLLEDFD---TELLKE-------IQTDMD 396
Query: 438 HLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
L + L++ S+ + E G +I Y+ + ++ + + + L +
Sbjct: 397 SLEELYQLIDASIMEEPPISVREGG--LIKDGYNENVDKYRHAKTEGKTWLAELEAKERE 454
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ K LK+ FG+ +T R + F +T + ++ +LK+L
Sbjct: 455 KTGI---KNLKIKFNKVFGYYLEVTNS----YRDLVPDYFTRKQTLANAERYITPELKEL 507
Query: 554 GDQYQKVLEEYKNCQKELV----NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
D ++ N + +L NR+ V + K++A +LD +S A +A
Sbjct: 508 EDMILGAEDKLINLEYDLFCEVRNRIAAEVVRIQKTAKAVA----KLDTFVSLAVVADQ- 562
Query: 610 PTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y RP IN V DI + RHP VE + FI ND L G + IITGPNM G
Sbjct: 563 -NNYCRPKINENGVIDI--KDGRHPVVEKMMNNDMFIANDTYLDNGNNRISIITGPNMAG 619
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQ + +LMAQ+GSFVP A I + D IF RVGA D G STFM EM E A+
Sbjct: 620 KSTYMRQTAIIVLMAQIGSFVPASSAKIGIVDRIFTRVGASDDLASGQSTFMVEMNEVAN 679
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAH 786
IL+ AT SL+++DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT L
Sbjct: 680 ILRNATSNSLLVLDEIGRGTSTFDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEG 739
Query: 787 ENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVV 846
+ N V NY ++ + + L K+ G D+S+GI VA+ A P+SV+
Sbjct: 740 KLHN---------VNNYCIA--VKEKGDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSVI 788
Query: 847 TLAREKAAELEDFTPSAVISDDAKIEVGSKRKR 879
A++ EL +AV + A +E G+K+K+
Sbjct: 789 ERAKQIVEELSANDITAVTKNLA-VETGTKKKK 820
>gi|448712106|ref|ZP_21701649.1| DNA mismatch repair protein MutS [Halobiforma nitratireducens JCM
10879]
gi|445791191|gb|EMA41840.1| DNA mismatch repair protein MutS [Halobiforma nitratireducens JCM
10879]
Length = 920
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 207/628 (32%), Positives = 324/628 (51%), Gaps = 58/628 (9%)
Query: 260 ALGALLSYAELLSD-------------ESNYGNY--YIRKYSLDSYMRLDSAAMRALNVL 304
A GALL YAE ES+ Y ++R+Y Y+ LD+ A+R+L +
Sbjct: 263 ACGALLEYAEYARGSESEAEAEADDERESDRLEYLTHLRRYDPREYLLLDAVALRSLELF 322
Query: 305 ESKT-DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
E + + + +L G+++ T +A +G R L WL++PLL+ + I ARLD V+
Sbjct: 323 EPRAVHSRDDATLVGVLDETASA-LGGRKLRDWLRRPLLEPDRIEARLDAVEELNGSVRA 381
Query: 364 RQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK 423
R+ L++ L+ + D+ERL+ + + RA + + L + +P +R+ L+ + + +
Sbjct: 382 REKLQELLRDVYDLERLIGRISRERANARDLRSLRDTLAVVPDVRAQLEDADCERLEQLH 441
Query: 424 ERYLDPLESLTD--DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLE 481
LDPL + + DD A+VE ++ E G +I+ YD L L+ +
Sbjct: 442 AD-LDPLADVREVIDD------AIVEDPP-IEITEGG--IIAEGYDGDLDDLRETARDGK 491
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
+ I L ++ + +LK+ + G+ +T P + + + +T K+
Sbjct: 492 QWIDDLAERERERTGI---DSLKVGYNSVHGYYIEVTN---PNL-DSVPEDYQRRQTLKN 544
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
+F +LK+ D+ E + EL V +T E + LA L+ +D L+S
Sbjct: 545 SERFVTPELKEREDEIVGAEERADELEYELFRDVRKTVADEVERVQDLADALATVDALVS 604
Query: 602 FADLASSCPTPYTRPDINPPDVG------DIILEGSRHPCVEAQDWVNFIPNDCKLIRGK 655
+ +A+ Y RP++ D +I +EG RHP VE + +F+PND + G+
Sbjct: 605 LSTVAAQYD--YARPELLERDRERGERGLEIDIEGGRHPVVE-RTQASFVPNDARFTDGQ 661
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
+ITGPNM GKST++RQV +L++QVGSFVP A ++ D IF RVGA D G
Sbjct: 662 R-LAVITGPNMSGKSTYMRQVAQIVLLSQVGSFVPAKSARLTPVDRIFTRVGASDDIAGG 720
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
STFM EM E A+IL+ A +RSL+++DE+GRGTST DG +A AI EHL +E+ A TLFA
Sbjct: 721 RSTFMVEMDELATILREADERSLVLLDEVGRGTSTADGLAIAQAITEHLHDEVGATTLFA 780
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
TH H LT + T+Q+ H +D ++ ++V PGA S+G+ V
Sbjct: 781 THHHPLTEV---------TEQLADAFTLHF--EVDQADGEVVFRHEVAPGAATGSYGVEV 829
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSA 863
A A PE VV +RE AE ED +P A
Sbjct: 830 ATAAGVPEPVVERSRELVAEAED-SPHA 856
>gi|423452929|ref|ZP_17429782.1| DNA mismatch repair protein mutS [Bacillus cereus BAG5X1-1]
gi|401139488|gb|EJQ47050.1| DNA mismatch repair protein mutS [Bacillus cereus BAG5X1-1]
Length = 887
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|379014493|ref|YP_005290729.1| DNA mismatch repair protein MutS, partial [Staphylococcus aureus
subsp. aureus VC40]
gi|374363190|gb|AEZ37295.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus VC40]
Length = 667
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 313/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 34 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 92
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 93 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 152
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 153 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 201
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 202 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 248
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 249 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 299
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 300 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 357
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 358 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 414
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 415 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 474
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 475 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 525
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 526 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 580
>gi|228940847|ref|ZP_04103407.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973768|ref|ZP_04134345.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980323|ref|ZP_04140634.1| DNA mismatch repair protein mutS [Bacillus thuringiensis Bt407]
gi|228779428|gb|EEM27684.1| DNA mismatch repair protein mutS [Bacillus thuringiensis Bt407]
gi|228785920|gb|EEM33922.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818861|gb|EEM64926.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 884
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|417649426|ref|ZP_12299225.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21189]
gi|440734741|ref|ZP_20914353.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|110810486|sp|Q2FYZ9.2|MUTS_STAA8 RecName: Full=DNA mismatch repair protein MutS
gi|14194229|gb|AAK56305.1|AF378369_1 DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|14970731|emb|CAC44463.1| MutS protein [Staphylococcus aureus]
gi|32731677|gb|AAP87081.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731691|gb|AAP87088.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|329727795|gb|EGG64246.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21189]
gi|436431769|gb|ELP29122.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
Length = 872
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 311/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|15926878|ref|NP_374411.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus N315]
gi|21282907|ref|NP_645995.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MW2]
gi|49486134|ref|YP_043355.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57634628|ref|NP_371819.2| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus Mu50]
gi|57651865|ref|YP_186171.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus COL]
gi|148267785|ref|YP_001246728.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JH9]
gi|150393844|ref|YP_001316519.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JH1]
gi|151221416|ref|YP_001332238.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979616|ref|YP_001441875.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus Mu3]
gi|161509461|ref|YP_001575120.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221142529|ref|ZP_03567022.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253316432|ref|ZP_04839645.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731914|ref|ZP_04866079.1| MutS protein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|255006082|ref|ZP_05144683.2| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257795649|ref|ZP_05644628.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9781]
gi|258416052|ref|ZP_05682320.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9763]
gi|258421635|ref|ZP_05684559.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9719]
gi|258434791|ref|ZP_05688865.1| DNA mismatch repair protein mutS [Staphylococcus aureus A9299]
gi|258444633|ref|ZP_05692962.1| DNA mismatch repair protein mutS [Staphylococcus aureus A8115]
gi|258447534|ref|ZP_05695678.1| DNA mismatch repair protein mutS [Staphylococcus aureus A6300]
gi|258449376|ref|ZP_05697479.1| DNA mismatch repair protein mutS [Staphylococcus aureus A6224]
gi|258454755|ref|ZP_05702719.1| DNA mismatch repair protein mutS [Staphylococcus aureus A5937]
gi|262051355|ref|ZP_06023578.1| DNA mismatch repair protein [Staphylococcus aureus 930918-3]
gi|269202912|ref|YP_003282181.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ED98]
gi|282892783|ref|ZP_06301018.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8117]
gi|282920539|ref|ZP_06328260.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9765]
gi|282927637|ref|ZP_06335253.1| DNA mismatch repair protein MutS [Staphylococcus aureus A10102]
gi|284024288|ref|ZP_06378686.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 132]
gi|294848291|ref|ZP_06789038.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9754]
gi|295406232|ref|ZP_06816039.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8819]
gi|296274853|ref|ZP_06857360.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MR1]
gi|297244460|ref|ZP_06928343.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8796]
gi|300912140|ref|ZP_07129583.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381140|ref|ZP_07363793.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|384861888|ref|YP_005744608.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|386830830|ref|YP_006237484.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387150438|ref|YP_005742002.1| DNA mismatch repair protein MutS [Staphylococcus aureus 04-02981]
gi|415686487|ref|ZP_11450576.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|415691145|ref|ZP_11453384.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417651404|ref|ZP_12301167.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21172]
gi|417653287|ref|ZP_12303021.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21193]
gi|417797873|ref|ZP_12445059.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21310]
gi|417802669|ref|ZP_12449726.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21318]
gi|418284588|ref|ZP_12897305.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21209]
gi|418314097|ref|ZP_12925576.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21334]
gi|418317218|ref|ZP_12928642.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21340]
gi|418317655|ref|ZP_12929071.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21232]
gi|418321701|ref|ZP_12933040.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus VCU006]
gi|418424436|ref|ZP_12997558.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427431|ref|ZP_13000443.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430271|ref|ZP_13003187.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433237|ref|ZP_13006014.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS4]
gi|418436908|ref|ZP_13008710.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS5]
gi|418439782|ref|ZP_13011488.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS6]
gi|418442832|ref|ZP_13014434.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS7]
gi|418445892|ref|ZP_13017368.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS8]
gi|418448838|ref|ZP_13020229.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS9]
gi|418451659|ref|ZP_13022993.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS10]
gi|418454715|ref|ZP_13025977.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS11a]
gi|418457591|ref|ZP_13028794.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS11b]
gi|418569133|ref|ZP_13133473.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21272]
gi|418570846|ref|ZP_13135107.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21283]
gi|418579129|ref|ZP_13143224.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418638066|ref|ZP_13200369.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-3]
gi|418642847|ref|ZP_13205033.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-24]
gi|418646090|ref|ZP_13208205.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-55]
gi|418648314|ref|ZP_13210359.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-88]
gi|418649287|ref|ZP_13211315.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-91]
gi|418654708|ref|ZP_13216604.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-99]
gi|418655428|ref|ZP_13217288.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-105]
gi|418660133|ref|ZP_13221775.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-111]
gi|418662222|ref|ZP_13223775.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-122]
gi|418873611|ref|ZP_13427906.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-125]
gi|418878144|ref|ZP_13432379.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880974|ref|ZP_13435193.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418886557|ref|ZP_13440705.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418894995|ref|ZP_13449090.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418903508|ref|ZP_13457549.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418906231|ref|ZP_13460258.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418911902|ref|ZP_13465885.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG547]
gi|418914393|ref|ZP_13468365.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920374|ref|ZP_13474307.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418925532|ref|ZP_13479434.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928555|ref|ZP_13482441.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418931366|ref|ZP_13485207.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418934198|ref|ZP_13488021.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418947386|ref|ZP_13499760.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-157]
gi|418955427|ref|ZP_13507367.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-189]
gi|418988117|ref|ZP_13535790.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418991159|ref|ZP_13538820.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419784953|ref|ZP_14310711.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-M]
gi|421150247|ref|ZP_15609903.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742760|ref|ZP_16796760.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745472|ref|ZP_16799411.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424768019|ref|ZP_18195312.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CM05]
gi|440706035|ref|ZP_20886784.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21282]
gi|443636916|ref|ZP_21121009.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21236]
gi|443639712|ref|ZP_21123713.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21196]
gi|448743367|ref|ZP_21725276.1| DNA mismatch repair protein MutS [Staphylococcus aureus KT/Y21]
gi|44888235|sp|Q931S8.2|MUTS_STAAM RecName: Full=DNA mismatch repair protein MutS
gi|54037876|sp|P65494.1|MUTS_STAAW RecName: Full=DNA mismatch repair protein MutS
gi|54041517|sp|P65493.1|MUTS_STAAN RecName: Full=DNA mismatch repair protein MutS
gi|56749199|sp|Q6G9R8.1|MUTS_STAAS RecName: Full=DNA mismatch repair protein MutS
gi|61213893|sp|Q5HGD6.1|MUTS_STAAC RecName: Full=DNA mismatch repair protein MutS
gi|110810498|sp|P0C1S1.1|MUTS_STAAU RecName: Full=DNA mismatch repair protein MutS
gi|166232141|sp|A7X1T6.1|MUTS_STAA1 RecName: Full=DNA mismatch repair protein MutS
gi|172048870|sp|A6QGJ4.1|MUTS_STAAE RecName: Full=DNA mismatch repair protein MutS
gi|189083196|sp|A6U1B4.1|MUTS_STAA2 RecName: Full=DNA mismatch repair protein MutS
gi|189083197|sp|A5ISH9.1|MUTS_STAA9 RecName: Full=DNA mismatch repair protein MutS
gi|189083198|sp|A8Z1W6.1|MUTS_STAAT RecName: Full=DNA mismatch repair protein MutS
gi|13701095|dbj|BAB42390.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
N315]
gi|21204346|dbj|BAB95043.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
MW2]
gi|32731679|gb|AAP87082.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus COL]
gi|32731681|gb|AAP87083.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731683|gb|AAP87084.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731685|gb|AAP87085.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731687|gb|AAP87086.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731689|gb|AAP87087.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731693|gb|AAP87089.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731697|gb|AAP87091.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|32731699|gb|AAP87092.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
gi|46395341|dbj|BAB57457.2| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|49244577|emb|CAG43006.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286051|gb|AAW38145.1| DNA mismatch repair protein HexA [Staphylococcus aureus subsp.
aureus COL]
gi|147740854|gb|ABQ49152.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JH9]
gi|149946296|gb|ABR52232.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JH1]
gi|150374216|dbj|BAF67476.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156721751|dbj|BAF78168.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160368270|gb|ABX29241.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|172087852|emb|CAQ35082.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087854|emb|CAQ35083.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087860|emb|CAQ35086.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087866|emb|CAQ35089.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087868|emb|CAQ35090.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087870|emb|CAQ35091.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087872|emb|CAQ35092.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087876|emb|CAQ35094.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087880|emb|CAQ35096.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087884|emb|CAQ35098.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087886|emb|CAQ35099.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|253724324|gb|EES93053.1| MutS protein [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257789621|gb|EEV27961.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9781]
gi|257839200|gb|EEV63676.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9763]
gi|257842321|gb|EEV66746.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9719]
gi|257849152|gb|EEV73134.1| DNA mismatch repair protein mutS [Staphylococcus aureus A9299]
gi|257850126|gb|EEV74079.1| DNA mismatch repair protein mutS [Staphylococcus aureus A8115]
gi|257853725|gb|EEV76684.1| DNA mismatch repair protein mutS [Staphylococcus aureus A6300]
gi|257857364|gb|EEV80262.1| DNA mismatch repair protein mutS [Staphylococcus aureus A6224]
gi|257863138|gb|EEV85902.1| DNA mismatch repair protein mutS [Staphylococcus aureus A5937]
gi|259160730|gb|EEW45751.1| DNA mismatch repair protein [Staphylococcus aureus 930918-3]
gi|262075202|gb|ACY11175.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ED98]
gi|282590640|gb|EFB95717.1| DNA mismatch repair protein MutS [Staphylococcus aureus A10102]
gi|282594201|gb|EFB99188.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9765]
gi|282764780|gb|EFC04905.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8117]
gi|285816977|gb|ADC37464.1| DNA mismatch repair protein MutS [Staphylococcus aureus 04-02981]
gi|294825091|gb|EFG41513.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9754]
gi|294968820|gb|EFG44842.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8819]
gi|297178490|gb|EFH37736.1| DNA mismatch repair protein MutS [Staphylococcus aureus A8796]
gi|300886386|gb|EFK81588.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751117|gb|ADL65294.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340123|gb|EFM06064.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315131089|gb|EFT87073.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315198537|gb|EFU28866.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140887|gb|EFW32734.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320143846|gb|EFW35618.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329727588|gb|EGG64044.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21172]
gi|329733669|gb|EGG69997.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21193]
gi|334274305|gb|EGL92627.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21318]
gi|334276995|gb|EGL95234.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21310]
gi|365173136|gb|EHM63723.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21209]
gi|365224316|gb|EHM65581.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus VCU006]
gi|365234235|gb|EHM75173.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21334]
gi|365239590|gb|EHM80392.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21340]
gi|365244923|gb|EHM85575.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21232]
gi|371978318|gb|EHO95568.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21272]
gi|371983026|gb|EHP00174.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21283]
gi|375014533|gb|EHS08214.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-99]
gi|375015960|gb|EHS09604.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-24]
gi|375021556|gb|EHS15052.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-55]
gi|375023290|gb|EHS16753.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-3]
gi|375026731|gb|EHS20110.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-88]
gi|375029660|gb|EHS22985.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-91]
gi|375033023|gb|EHS26234.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-111]
gi|375036913|gb|EHS29974.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-122]
gi|375037144|gb|EHS30197.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-105]
gi|375366148|gb|EHS70160.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370910|gb|EHS74702.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-189]
gi|375376129|gb|EHS79678.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-157]
gi|377694266|gb|EHT18631.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377694801|gb|EHT19165.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377697156|gb|EHT21511.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377714648|gb|EHT38847.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377719905|gb|EHT44075.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377723281|gb|EHT47406.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725280|gb|EHT49395.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG547]
gi|377725510|gb|EHT49623.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731867|gb|EHT55920.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377738467|gb|EHT62476.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742523|gb|EHT66508.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744601|gb|EHT68578.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377757895|gb|EHT81783.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377765531|gb|EHT89381.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377765733|gb|EHT89582.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377770941|gb|EHT94700.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383363554|gb|EID40886.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-M]
gi|385196222|emb|CCG15844.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387718666|gb|EIK06624.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387719018|gb|EIK06974.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS2]
gi|387720343|gb|EIK08255.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS1]
gi|387725677|gb|EIK13281.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS4]
gi|387728012|gb|EIK15512.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS5]
gi|387730611|gb|EIK17978.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS6]
gi|387735820|gb|EIK22930.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS8]
gi|387737497|gb|EIK24563.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS7]
gi|387737747|gb|EIK24807.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS9]
gi|387744540|gb|EIK31304.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS10]
gi|387745830|gb|EIK32580.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS11a]
gi|387747323|gb|EIK34032.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus VRS11b]
gi|394329637|gb|EJE55739.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|402348656|gb|EJU83635.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CM05]
gi|408423480|emb|CCJ10891.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408425470|emb|CCJ12857.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408427458|emb|CCJ14821.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408429445|emb|CCJ26610.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408431433|emb|CCJ18748.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408433427|emb|CCJ20712.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408435418|emb|CCJ22678.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|408437403|emb|CCJ24646.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST228]
gi|436507566|gb|ELP43246.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21282]
gi|443406363|gb|ELS64943.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21196]
gi|443406893|gb|ELS65463.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21236]
gi|445563296|gb|ELY19458.1| DNA mismatch repair protein MutS [Staphylococcus aureus KT/Y21]
Length = 872
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 311/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|423389970|ref|ZP_17367196.1| DNA mismatch repair protein mutS [Bacillus cereus BAG1X1-3]
gi|401640886|gb|EJS58612.1| DNA mismatch repair protein mutS [Bacillus cereus BAG1X1-3]
Length = 890
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYISKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPAKEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|229162704|ref|ZP_04290661.1| DNA mismatch repair protein mutS [Bacillus cereus R309803]
gi|228620586|gb|EEK77455.1| DNA mismatch repair protein mutS [Bacillus cereus R309803]
Length = 890
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|423483360|ref|ZP_17460050.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6X1-2]
gi|401140911|gb|EJQ48466.1| DNA mismatch repair protein mutS [Bacillus cereus BAG6X1-2]
Length = 890
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|449137448|ref|ZP_21772774.1| DNA mismatch repair protein MutS [Rhodopirellula europaea 6C]
gi|448883900|gb|EMB14407.1| DNA mismatch repair protein MutS [Rhodopirellula europaea 6C]
Length = 891
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 204/617 (33%), Positives = 316/617 (51%), Gaps = 50/617 (8%)
Query: 253 GFE----IAPGALGALLSYAELLSDESNYGNY-YIRK---YSLDSYMRLDSAAMRALNVL 304
GFE +A A GA+L Y + E+ G+ + R ++ +++D+A R+L +
Sbjct: 237 GFEDNGDVAIRAAGAVLCYLK----ETQRGSLDHFRSLTCHNRSPVLQIDAATRRSLEIT 292
Query: 305 ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALR 364
+ ++ +L G+++RT T MG RLL L PL+D + I R D V FV + LR
Sbjct: 293 RTMRTGSREGALLGVIDRTVTP-MGSRLLADHLAAPLIDADAITYRTDAVDEFVRNNNLR 351
Query: 365 QDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ-FSSLIK 423
D+R L D+ RL+ + R G + + ++ + LP +++ L + + + L
Sbjct: 352 SDIRTVLGDTYDLTRLLARVATGRTGPRDLRQIAVTLSGLPALKARLAERDSACLTQLES 411
Query: 424 ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQ 483
E +L P + LN L +G + I +D+ L L+ +R
Sbjct: 412 ELHLCPELREQLESALNDECPL--------SAADGNF-IREGFDSELDTLRELARGGKRW 462
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
I ++ + +P LK+ FG+ ++ + K+ FI +T K+
Sbjct: 463 IAEYQQRQMDETGIP---NLKVGYNRVFGYYLEVSNAH----KDKIPADFIRKQTLKNCE 515
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
++ +LK+ ++ E+ + ++ L + + I + +A ++ DV+ S A
Sbjct: 516 RYITPELKEYEEKVLAADEKASSREQMLFTLLRENTHKHLAILQEVANAIAMTDVVASLA 575
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRGKSWFQI 660
++A+ + RP + V + +EG RHP ++ AQ F+PNDC +
Sbjct: 576 EVAAQ--HHWVRPTLTDDSV--LRIEGGRHPVLDVTMAQG--EFVPNDCNQSPETGMILL 629
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST+IRQV + L+AQ GSFVP A I + D IFARVGA D RG STFM
Sbjct: 630 ITGPNMAGKSTYIRQVALITLLAQTGSFVPATSAEIGIADRIFARVGASDELSRGQSTFM 689
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
EM+ETA IL AT RSL+I+DE+GRGTSTYDG LAWAI EHL E+I A TLFATH+HE
Sbjct: 690 VEMVETARILNTATSRSLVILDEIGRGTSTYDGLSLAWAITEHLHEQIGARTLFATHYHE 749
Query: 781 LTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFAN 840
L AL + + VAN V+ + ++ L+++ PG+ D+S+GI VA A
Sbjct: 750 LAAL---------QETLPRVANLSVA--VKEWQDEVVFLHRIVPGSADKSYGIQVARLAG 798
Query: 841 FPESVVTLAREKAAELE 857
P V A++ A+LE
Sbjct: 799 IPVEVNERAKDVLAQLE 815
>gi|228909593|ref|ZP_04073416.1| DNA mismatch repair protein mutS [Bacillus thuringiensis IBL 200]
gi|228849882|gb|EEM94713.1| DNA mismatch repair protein mutS [Bacillus thuringiensis IBL 200]
Length = 886
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|335033077|ref|ZP_08526449.1| DNA mismatch repair protein mutS [Agrobacterium sp. ATCC 31749]
gi|44888231|sp|Q8UIF2.1|MUTS_AGRT5 RecName: Full=DNA mismatch repair protein MutS
gi|333795753|gb|EGL67078.1| DNA mismatch repair protein mutS [Agrobacterium sp. ATCC 31749]
Length = 904
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 216/659 (32%), Positives = 322/659 (48%), Gaps = 52/659 (7%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+ S S + +D A L ++++ + +++ SL +NRT T G G RLL L PL D
Sbjct: 281 RESAASTLFIDPATRANLELVKTLS-GDRDGSLLHALNRTVTGG-GARLLAERLMSPLTD 338
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
INARLD V +DD +L LR LK ++D+ R + L R G + + + Q +
Sbjct: 339 PERINARLDAVAYLIDDVSLCDGLRDALKHVADMPRALSRLALERGGPRDLGAIRQGLVS 398
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMIS 463
I L L+ + L L + + + DL L+ +
Sbjct: 399 AEKIAVILD------GGLLPDELAKALRDLKALPGALEAMLGSMLADDLPLLKRDGGFLR 452
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
+ L ++ ++ R I L Q A + + K+LK+ G+ +T
Sbjct: 453 EGANPELDEVRALRDQSRRVIAGLQLQYADETGI---KSLKIKHNNVLGYFIEVTAGNAD 509
Query: 524 KIRK--KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
+ + +FI +T ++FT T+L L + E + E R+++ V
Sbjct: 510 VMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEAFERMVEAVVQ 569
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA--- 638
+E K+ A L+ +DV S A LA+ Y RP ++ I +G RHP VE
Sbjct: 570 QAEAIKAGALALAVIDVASSLAYLATE--QAYCRPIVDASMTFSI--KGGRHPVVEQALR 625
Query: 639 -QDWVNFIPNDCKLI------RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
Q FI N+C L G W ++TGPNMGGKSTF+RQ + ++AQ+GSFVP
Sbjct: 626 RQSAGPFIANNCDLSAVNGGKNGAIW--LLTGPNMGGKSTFLRQNALIAILAQIGSFVPA 683
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
+ A I V D +F+RVGA D RG STFM EM+ETA+IL ATDRSL+I+DE+GRGT+T+
Sbjct: 684 EAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGTATF 743
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG +AWA EHL E R LFATHFHELT L+ E + M +
Sbjct: 744 DGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLS-EKLGRLSNATM----------RVKE 792
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---TPSAVISDD 868
+ L++V PGA D+S+GI VA A P SVV ARE +LED P++ + DD
Sbjct: 793 WEGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDD 852
Query: 869 AKI-EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEK 926
+ ++ +R+ G ++ + LK F+ + M +EAL+ + +K +L K
Sbjct: 853 LPLFQIAVRREETRKA-----GPSKVEEALKSFNP---DEMTPREALDALYALKKELGK 903
>gi|427719425|ref|YP_007067419.1| DNA mismatch repair protein MutS [Calothrix sp. PCC 7507]
gi|427351861|gb|AFY34585.1| DNA mismatch repair protein MutS [Calothrix sp. PCC 7507]
Length = 863
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 207/628 (32%), Positives = 319/628 (50%), Gaps = 52/628 (8%)
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
+A A G LL Y E E++ +R Y++ Y+ +D R L + ++ D +
Sbjct: 265 LPLAVRAAGGLLEYIEDTQKENSVPLQLLRTYTVTDYLIVDHQTRRNLEITQTVRDGTFH 324
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL ++RT TA MG R L WL QPLLD I AR D +Q V++TALRQDLRQ L++
Sbjct: 325 GSLLWALDRTSTA-MGGRALRRWLLQPLLDTKGIRARQDTIQELVENTALRQDLRQLLRQ 383
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP-LES 432
I D+ERL A + +V L S RLP + + Q F +++ + P LE
Sbjct: 384 IYDLERLTGRAGSGTANAKDLVALADSLSRLPELSRLVDQAHSPFLKALQK--VPPILED 441
Query: 433 LTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTA 492
L H N +VE+ ++ G +I S + L K E+ ++ I +L
Sbjct: 442 LAQKLHNN----IVESPPI--HIKEGS-LIRSGVNPLLDERKATVEADQQWIANLEVDER 494
Query: 493 SDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+ +P LK+ FG+ I++ + ++ +I +T + ++ +LK+
Sbjct: 495 AKTGIPT---LKVGFNKTFGYYISISRAKADQV----PVNYIRKQTLTNEERYITPELKE 547
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
+ ++ + E+ + + + +E+ ++L+ ++ DVL ADLA
Sbjct: 548 REARILSARDDLNQLEYEIFVELREEVGSQAEVIRNLSRAVAAADVLCGLADLAVH--QG 605
Query: 613 YTRPDINPPDVG-DIILEGSRHPCVEAQDWVNF-IPNDCKLIRGKSWFQ----------- 659
Y RP++ VG +I + RHP VE F +PN +L G+
Sbjct: 606 YCRPEML---VGREIGIVDGRHPVVEQSLPAGFFVPNSTQL--GQESLTNDQRQMTNDNP 660
Query: 660 ---IITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
I+TGPN GKS ++RQVG+ LMAQ GSFVP A + V D IF RVGA D G
Sbjct: 661 DLIILTGPNASGKSCYLRQVGLIQLMAQTGSFVPARFAKLGVCDRIFTRVGAVDDLATGQ 720
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM ETA+IL AT RSL+++DE+GRGT+T+DG +AWA+ E+L +I++ T+FAT
Sbjct: 721 STFMVEMNETANILNHATSRSLVLLDEIGRGTATFDGLSIAWAVAEYLATDIQSRTIFAT 780
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HEL LA N VANY V+ + ++ L++V+PG D+S+GI
Sbjct: 781 HYHELNELAGMLEN---------VANYQVT--VKELPDQIIFLHQVQPGGADKSYGIEAG 829
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAV 864
A P V+ A++ ++E + A+
Sbjct: 830 RLAGLPAVVIQRAKQVMGQIEKHSKIAM 857
>gi|384187773|ref|YP_005573669.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676090|ref|YP_006928461.1| DNA mismatch repair protein MutS [Bacillus thuringiensis Bt407]
gi|423385274|ref|ZP_17362530.1| DNA mismatch repair protein mutS [Bacillus cereus BAG1X1-2]
gi|423528369|ref|ZP_17504814.1| DNA mismatch repair protein mutS [Bacillus cereus HuB1-1]
gi|452200151|ref|YP_007480232.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326941482|gb|AEA17378.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401635330|gb|EJS53085.1| DNA mismatch repair protein mutS [Bacillus cereus BAG1X1-2]
gi|402452032|gb|EJV83851.1| DNA mismatch repair protein mutS [Bacillus cereus HuB1-1]
gi|409175219|gb|AFV19524.1| DNA mismatch repair protein MutS [Bacillus thuringiensis Bt407]
gi|452105544|gb|AGG02484.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 890
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|89894338|ref|YP_517825.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense Y51]
gi|122483100|sp|Q24X61.1|MUTS_DESHY RecName: Full=DNA mismatch repair protein MutS
gi|89333786|dbj|BAE83381.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 862
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 225/711 (31%), Positives = 352/711 (49%), Gaps = 67/711 (9%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
GL +VD++ G + + L + E LLP E +K+ +
Sbjct: 145 GLAFVDVST---GEFTVFQTESLDILTTELSRIRPSELLLPAELLKAKHWRP-------- 193
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDES 275
LT+R+K ++ L+ R+L F A A L Y +L
Sbjct: 194 -YYLTQREKKTYQ--------HTLLEERFTEQRELFQEFPTAMKAANGLWQY--ILETSP 242
Query: 276 NYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRL 332
+I K Y + +M LD R L + ES K +L +++ T TA G RL
Sbjct: 243 GIDPSHILKVNAYRPEHWMLLDPWTRRNLELTESIRGQGKKGTLLSVLDFTKTA-FGGRL 301
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQ 392
L W++QPLL EI RLD V+A V+D+ LR DL Q ++ D+ERLM + A +
Sbjct: 302 LRRWIEQPLLLKGEIEKRLDYVEALVEDSFLRGDLIQLFGKVYDLERLMGKVSYGTANAR 361
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDL 452
++ L Q+ LP +R+ L EG+ L + ++ LE L + A +E +++
Sbjct: 362 DLLSLAQTLGVLPQLRALLA--EGKSEPL--QAFIPALEGL------DPLAATLEQAINP 411
Query: 453 D---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
+ L++G ++ + Y + L++ + + L + + D ++LK+
Sbjct: 412 EAPISLKDGN-LLKAGYSVEIDELRSISSGGKAWVAKLE---SMEKDRTGIRSLKVGYNK 467
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
FG+ +T I ++I +T + +F +LK+ + E+ +
Sbjct: 468 VFGYYIEVTHANSHLI----PAEYIRKQTLANAERFITPELKEYEQKILGAEEKVTQLEY 523
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
+L + +T + A L+E+DV S A+ ++ Y+RP + + G I+E
Sbjct: 524 QLFLELRETVRGQAAKILEAAHALAEIDVYTSLAE--AAVRHHYSRP-VMKGEGGLTIIE 580
Query: 630 GSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
G RHP VE+ QD +F+PND L K +ITGPNM GKST++RQV + +LMAQ+GS
Sbjct: 581 G-RHPVVESMLQD-TSFVPNDTILTEDKH-LALITGPNMAGKSTYMRQVALIVLMAQIGS 637
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+I + D IF RVGA D G STFM EM E A IL+ T +SLII+DE+GRG
Sbjct: 638 FVPAQQATIPIADHIFTRVGASDDLASGQSTFMVEMYEVAHILRHVTPQSLIILDEVGRG 697
Query: 748 TSTYDGFGLAWAICEHLV-EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
T+TYDG +AWA+ E+L +E + TLFATH+HELT L ++ G+ N HV
Sbjct: 698 TATYDGLSIAWAVAEYLAGQENKPKTLFATHYHELTDLEETHS---------GIFNLHVG 748
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ ++ L+K+ PG D+S+GI VA+ A P +++ A+ ELE
Sbjct: 749 --VREHGEEIVFLHKIIPGRADRSYGIQVAKLAGLPANLLHRAKIILHELE 797
>gi|425444955|ref|ZP_18824995.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9443]
gi|389735159|emb|CCI01290.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9443]
Length = 882
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 308/623 (49%), Gaps = 62/623 (9%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A G LL Y E + ++ YS+ ++ LD R L + ++ D + SL
Sbjct: 274 AAGGLLEYIEDTQKANQVPLQPLKTYSVSEFLILDGQTRRNLEITQTVRDGSFYGSLLWA 333
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RTCTA MG R L WL QPLLD I AR D +Q D+ +LRQD+RQ L+ I DIER
Sbjct: 334 IDRTCTA-MGSRALRRWLLQPLLDSRGIRARQDTIQELKDNPSLRQDIRQKLREIYDIER 392
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRL------------PYIRSALQQYEGQFSSLIKERYL 427
L + A + ++ L S ++L PY++ ALQQ L ++
Sbjct: 393 LSGRVGAGTANARDLLSLAASLVKLADLAALVASGNSPYLK-ALQQIPADLEKLGQQ--- 448
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
IA + S L E G +I D L AL+ + + + +L
Sbjct: 449 --------------VIAHLVESPPLHLKEGG--VIREGIDAQLDALRRDYQEVIDWFKNL 492
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITK-KEEPKIRKKLTTQFIVLETRKDGVKFT 546
+ LK++ FG+ + + K + ++ + Q +V E R +
Sbjct: 493 ETTEKERTGI---SNLKVNYNKTFGYYISLPRSKADFAPKEYVRKQTLVNEER-----YI 544
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
T+LK+ + ++E + E+ + + + FS + +AT ++ LDVL A++A
Sbjct: 545 TTELKEKENIILTAVDELNKLEYEIFSDLRRQVAEFSPEIREVATKVAALDVLAGLAEIA 604
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF-IPNDCKLIRGKSW----FQII 661
Y RP+I + DI + RHP VE F +PN L + I+
Sbjct: 605 --VYQGYCRPEIADGRLIDI--KDGRHPVVEQSLGAGFFVPNSINLGNQEGLEYPDLIIL 660
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPN GKS ++RQVG+ L+AQ GSFVP A IS+ D IF RVGA D G STFM
Sbjct: 661 TGPNASGKSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQSTFMV 720
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EM ETA+IL ATDRSL+++DE+GRGT+T+DG +AW++ E+L +++ T+FATH+HEL
Sbjct: 721 EMNETANILNHATDRSLVLLDEIGRGTATFDGLSIAWSVAEYLATVLQSRTIFATHYHEL 780
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
LA N VANY V+ + ++ L++V PG D+S+GI A
Sbjct: 781 NELASILEN---------VANYQVT--VKELPHEIVFLHQVRPGGADKSYGIEAGRLAGL 829
Query: 842 PESVVTLAREKAAELEDFTPSAV 864
P SV+ A + ++E + A+
Sbjct: 830 PASVIDRAMQVMGQIEKHSKIAI 852
>gi|49478366|ref|YP_037830.1| DNA mismatch repair protein MutS [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|81696708|sp|Q6HF46.1|MUTS_BACHK RecName: Full=DNA mismatch repair protein MutS
gi|49329922|gb|AAT60568.1| DNA mismatch repair protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 890
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|357058861|ref|ZP_09119707.1| DNA mismatch repair protein MutS [Selenomonas infelix ATCC 43532]
gi|355373207|gb|EHG20528.1| DNA mismatch repair protein MutS [Selenomonas infelix ATCC 43532]
Length = 864
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 218/658 (33%), Positives = 319/658 (48%), Gaps = 72/658 (10%)
Query: 291 MRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
M+LD+ +R L + S D K +LF +++ T T MG RLL WL+ PLL + I+AR
Sbjct: 262 MQLDTYTLRNLEITRSLRDGGKKNTLFDVLDFTRTP-MGTRLLKAWLEHPLLTPHRIDAR 320
Query: 351 LDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
L V V++ LR LR+HL+ + D ERL+ +E + A + +V L S LP +R
Sbjct: 321 LGAVAELVENAPLRGSLREHLRSVYDFERLLTRIETQTANARDLVALRVSLAALPAVREI 380
Query: 411 LQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGL 470
L G ++ + R +E+ DD N + L + G +I + YD L
Sbjct: 381 L----GTAATSLLTRAHASIETF--DDLRNTLERAIVDEPGLSVRDGG--IIRAGYDAAL 432
Query: 471 ----------SALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
AL E E ER + K LK+ FG+ +
Sbjct: 433 DELHAFSHDSKALLQEMEERERMRTGI-------------KTLKIGYNKVFGYYIEVRHS 479
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRV 575
R ++ +I +T + +F +LK LG Q + EY + EL +V
Sbjct: 480 G----RDQVPADYIRKQTLANTERFITEELKAFEAKILGAQEKITALEY-HIFTELREQV 534
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
V + +++A +DVL S A A++ Y RP + G I++ RHP
Sbjct: 535 RAQLVPIQNVARAIA----RVDVLQSLAKAAANYR--YVRPQVTTN--GAILIRDGRHPL 586
Query: 636 VE--AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE Q V F+PND L G + +ITGPNM GKST++RQV + LMAQ+GSFVP
Sbjct: 587 VERLLQREV-FVPNDTDLSHGGTETMLITGPNMAGKSTYMRQVALLTLMAQIGSFVPARA 645
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A I+ D IF R+GA D + G STFM EM E A IL+ AT SL+I+DE+GRGTST+DG
Sbjct: 646 AEIAPVDRIFTRIGASDDLVSGQSTFMVEMNEVAQILREATKDSLVILDEIGRGTSTFDG 705
Query: 754 FGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
+A A+ EH+ + I A TLFATH+HELT + +E + NY ++ +
Sbjct: 706 MSIARAVVEHIDKYIHAKTLFATHYHELTEMENER-----------IRNYCIA--VREKG 752
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEV 873
+ + L ++ GA D+S+GIHVA A P V A E LE + S A+I
Sbjct: 753 KNVAFLRRIVAGAADKSYGIHVARLAGLPPKVTARAEEILHALEQKESA---SAGAEIPA 809
Query: 874 GSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAGDC 931
+ ++ P + A L E + + TM EA+ + R+++ K+AG
Sbjct: 810 ANTQEM---PPAEGMASLFADGTLDELRTLDIMTMTPLEAMNTLYRLQEQARKEAGQA 864
>gi|423604602|ref|ZP_17580495.1| DNA mismatch repair protein mutS [Bacillus cereus VD102]
gi|401245222|gb|EJR51580.1| DNA mismatch repair protein mutS [Bacillus cereus VD102]
Length = 892
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLSGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|228935066|ref|ZP_04097896.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824636|gb|EEM70438.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 886
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|65321095|ref|ZP_00394054.1| COG0249: Mismatch repair ATPase (MutS family) [Bacillus anthracis
str. A2012]
gi|229186008|ref|ZP_04313178.1| DNA mismatch repair protein mutS [Bacillus cereus BGSC 6E1]
gi|228597427|gb|EEK55077.1| DNA mismatch repair protein mutS [Bacillus cereus BGSC 6E1]
Length = 886
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|392960659|ref|ZP_10326125.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|421054583|ref|ZP_15517550.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|421057355|ref|ZP_15520199.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
gi|421065506|ref|ZP_15527247.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|421071446|ref|ZP_15532564.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392440685|gb|EIW18354.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|392447073|gb|EIW24336.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392454795|gb|EIW31614.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|392458760|gb|EIW35254.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|392463263|gb|EIW39233.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
Length = 864
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/609 (32%), Positives = 312/609 (51%), Gaps = 42/609 (6%)
Query: 255 EIAPGALGALLSYA-ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
++A A+G LL Y + + + ++ N I Y+ Y+ +DS +MR L V + D K
Sbjct: 227 DVALAAIGCLLYYLHQTVKTDLSHINRLI-NYNAFEYLTIDSTSMRNLEVTRNVRDGGKK 285
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
+L +++ T TA MG RLL WL+ PL++ I R D + ++ LRQ + + L
Sbjct: 286 DTLLYVLDYTKTA-MGGRLLKKWLEYPLMNTTHIIQRQDSIAELLEKPTLRQTIHETLAN 344
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
I D+ER++ +E A + ++ L S + LP I+ LQ+ F S + YL
Sbjct: 345 IYDLERILTRIEVGTASARDLIALKSSLMVLPTIKEQLQKTNTVFLSNL-HFYLH----- 398
Query: 434 TDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
H++ + LV+T++ E G +I YD L L ++ + +
Sbjct: 399 ---THVD-LVTLVDTAIVDNPPFSVREGG--LIKRGYDLELDELHTIARDSKQFVQDIET 452
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ + + K+LK+ FG+ +T + ++ +T + ++ +
Sbjct: 453 RERENTGI---KSLKVGYNKVFGYYIEVTHSHTASV----PLSYVRKQTLANAERYITPE 505
Query: 550 LKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSC 609
LK+ + E+ + L +++ + + + A L++LD ++S +++A
Sbjct: 506 LKEFESKILGAQEKIVTIEYHLFSKIRDHIKVYIKEIQETARQLAQLDAIISLSEVAFRH 565
Query: 610 PTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y RP I +I ++ RHP VE F+PND +L + IITGPNM G
Sbjct: 566 N--YIRPTIT--QTREITIKDGRHPIVERLLKRELFVPNDSELNHHSNEIMIITGPNMAG 621
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQV + +LMAQ+GSF+P A IS D IF RVGA D G STFM EM E A
Sbjct: 622 KSTYMRQVALLVLMAQIGSFIPAREAIISPVDRIFTRVGASDDLSTGQSTFMVEMNEVAQ 681
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
ILK AT +SLII+DE+GRGTST+DG +A A+ E++ E ++A TLFATH+HELT LA +
Sbjct: 682 ILKHATSQSLIILDEIGRGTSTFDGMSIARAVIEYIKERVKAKTLFATHYHELTELADYH 741
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
V NY V+ + + L ++ PG D+S+GIHVA+ A P+ V+
Sbjct: 742 KT---------VKNYSVA--VKERGSDVVFLRRIIPGGADKSYGIHVAQLAGLPQKVIKR 790
Query: 849 AREKAAELE 857
A+E ELE
Sbjct: 791 AQELLVELE 799
>gi|384869830|ref|YP_005752544.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus T0131]
gi|329313965|gb|AEB88378.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus T0131]
Length = 872
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 311/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|334340541|ref|YP_004545521.1| DNA mismatch repair protein MutS [Desulfotomaculum ruminis DSM
2154]
gi|334091895|gb|AEG60235.1| DNA mismatch repair protein MutS [Desulfotomaculum ruminis DSM
2154]
Length = 869
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 238/718 (33%), Positives = 354/718 (49%), Gaps = 53/718 (7%)
Query: 148 FRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKT 207
+R G IGL DL+ + + + ++ L L +E ++P + + S
Sbjct: 130 YRYPGNIIGLALTDLSTGLFQVTQLEGQYAPDVLKDELERLAPREIVVPEDQI--STGLR 187
Query: 208 LRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSY 267
L++A G+++T + F + L + V D + GA LL Y
Sbjct: 188 LQEA---AGLVVTPLESRAFGPEAAIPTLKQHFGPKVSD--DFLQANPAVTGAAAGLLEY 242
Query: 268 AELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCT 325
L+ + N+ I +Y+ S+M LD A R L + D K SL G+++ T T
Sbjct: 243 --LIRTQRRKLNHITSISRYTPGSFMVLDGVARRNLEISRDIRDGEKKGSLLGVLDATKT 300
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLE 385
A MG R+L WL+QPL+D+N IN RLD V V LR +L Q LK I D+ERL
Sbjct: 301 A-MGGRMLRRWLEQPLIDINRINDRLDAVAELVHSALLRDELTQSLKHIYDLERLTAKAA 359
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIAL 445
A + ++ L S +LP +R AL+ + SL+++ Y D + LTD L +AL
Sbjct: 360 YGSANGRDMLALLASLEKLPLLRQALKDCQ---CSLLRKIY-DRFDCLTDLKELLN-VAL 414
Query: 446 VETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKL 505
E + E G +I + + + L++ + + SL + + K+LK+
Sbjct: 415 AENP-PVSLREGG--LIKTGFHPEVDQLRSAARDGKNWLASLEAREREKTSI---KSLKV 468
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKV 560
FG+ +T+ + + +T + +F LK+ LG + + V
Sbjct: 469 GFNKVFGYYLEVTRANLNLVPDYYQRR----QTLANAERFITPDLKEYESMILGAEDRLV 524
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
EY +L NRV A I ++ A +L+ +D L++ A++AS Y RP+I
Sbjct: 525 DLEY-TLFVDLRNRV---AAEVDRI-QNTAILLATVDTLVALAEVASR--QGYVRPEITD 577
Query: 621 PDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
V DI LEG RHP VE A F+PND L G + +ITGPNMGGKST+ RQV
Sbjct: 578 DGVIDI-LEG-RHPVVEIALGPGGFVPNDTLLDGGLNRLGLITGPNMGGKSTYQRQVAHI 635
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
+LMAQVGSFVP RA I D IFARVGA D G STFM EM ET I+ ATD+SL+
Sbjct: 636 VLMAQVGSFVPAARAKIGTVDRIFARVGASDDLRSGQSTFMVEMQETKQIIDHATDKSLV 695
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
IIDELGRGTS +G +A ++ E+L + I TLF+TH+HEL L + G
Sbjct: 696 IIDELGRGTSNLEGMAIAQSVIEYLHDVIGCRTLFSTHYHELAEL---------EGILPG 746
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ N+ + + ++T L KV +S+G+H A+ A P +++ A + +LE
Sbjct: 747 LKNFATA--VREQGDEVTFLRKVIRAQASKSYGVHCAQLAGLPGEIISRANQLVGQLE 802
>gi|423615969|ref|ZP_17591803.1| DNA mismatch repair protein mutS [Bacillus cereus VD115]
gi|401260506|gb|EJR66679.1| DNA mismatch repair protein mutS [Bacillus cereus VD115]
Length = 890
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|229104333|ref|ZP_04235002.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-28]
gi|407706174|ref|YP_006829759.1| phosphatidate cytidylyltransferase [Bacillus thuringiensis MC28]
gi|228679031|gb|EEL33239.1| DNA mismatch repair protein mutS [Bacillus cereus Rock3-28]
gi|407383859|gb|AFU14360.1| DNA mismatch repair protein mutS [Bacillus thuringiensis MC28]
Length = 884
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|389857633|ref|YP_006359876.1| DNA mismatch repair protein MutS [Streptococcus suis ST1]
gi|353741351|gb|AER22358.1| DNA mismatch repair protein MutS [Streptococcus suis ST1]
Length = 846
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 216/687 (31%), Positives = 352/687 (51%), Gaps = 79/687 (11%)
Query: 202 SSECKTLRDALTR---CGVMLTERKKTEFKTR-DLVQDLDRLVRGSVEPVRDLVSGFEIA 257
+S C +R+ R G L+E ++ F + +L+ + V V+ + + ++ E A
Sbjct: 159 TSLCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA 218
Query: 258 PGALGALLSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
A G LLSY + D S+ + Y + Y+++D A +L++LE+ K+ S
Sbjct: 219 --AAGKLLSYLHRTQMRDLSHLQK--VVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGS 274
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L+ L++ T TA MG RLL W+ +PL+D+ I R +VQ F+D R DL + LK +
Sbjct: 275 LYWLLDETKTA-MGMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVEALKGVY 333
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLT 434
DIERL + + + +++L Q+ +P I++ LQQ E +L+ LDP+ L
Sbjct: 334 DIERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAG--LDPIPEL- 390
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALK----------NEQESLE 481
H+ L+ +++D + + +G +I + +D L + E E+ E
Sbjct: 391 ---HV-----LISSAIDPEAQGTITDGN-IIRTGFDETLDQYRLVIREGAGWIAEIEAKE 441
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
R+ ++ LK+D + G+ F +T + F T K+
Sbjct: 442 REASGINN-------------LKIDYNKKDGYYFHVTNSN----LGNVPDHFFRKATLKN 484
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
++ +L K+ Q + ++ N + E+ R+ Q + + LA ++ +DVL +
Sbjct: 485 SERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQA 544
Query: 602 FADLASS----CPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKS 656
FA +A CP +T D ++ ++ RH VE +IPN L +
Sbjct: 545 FAVVAEQQHLVCPR-FT-------DQRELTIDRGRHAVVEKVMGKQTYIPNSIHL-NTDT 595
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
Q+ITGPNM GKST++RQ+ V ++MAQ+GS+VP D+A + + D IF R+GA D + G
Sbjct: 596 HMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRIGAADDLVSGQ 655
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM+E ++ ATDRSLI+ DELGRGT+TYDG LA +I E++ ++I A TLFAT
Sbjct: 656 STFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHDKIGAKTLFAT 715
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L ++ + + N HVS ++T L+K+ G D+S+GIHVA
Sbjct: 716 HYHELTDL---------SQTLEHLENVHVSTL--EKDGQVTFLHKIAQGPADKSYGIHVA 764
Query: 837 EFANFPESVVTLAREKAAELEDFTPSA 863
+ A PE ++ A LE+ P+A
Sbjct: 765 KIAGMPEELLQRADRILQTLENQAPTA 791
>gi|229018965|ref|ZP_04175807.1| DNA mismatch repair protein mutS [Bacillus cereus AH1273]
gi|229025208|ref|ZP_04181632.1| DNA mismatch repair protein mutS [Bacillus cereus AH1272]
gi|228736141|gb|EEL86712.1| DNA mismatch repair protein mutS [Bacillus cereus AH1272]
gi|228742293|gb|EEL92451.1| DNA mismatch repair protein mutS [Bacillus cereus AH1273]
Length = 884
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD YM++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQYMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SL + L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLAE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYISKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPAKEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|228916407|ref|ZP_04079974.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228843210|gb|EEM88291.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 886
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|428298685|ref|YP_007136991.1| DNA mismatch repair protein MutS [Calothrix sp. PCC 6303]
gi|428235229|gb|AFZ01019.1| DNA mismatch repair protein MutS [Calothrix sp. PCC 6303]
Length = 862
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 266/879 (30%), Positives = 415/879 (47%), Gaps = 116/879 (13%)
Query: 34 AVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFETIARDLL 93
AV F+ D++ + +A +A+ T+ + G A+S V + +E A LL
Sbjct: 46 AVLFYRVGDFFECYFSDAVTLAQELELVLTSKQAGEQGRVAMSGVP--HHSWERHA-TLL 102
Query: 94 LERTDHTL---ELYEGSGSNWRLVKSG-----TPGNLGSYED-VLFANNEMQDTPVIVAL 144
+E+ + ++ + + + RLV+ TPG L ED +L A V++A
Sbjct: 103 VEKGYAVVICDQVEDAAAAAGRLVRREVTRILTPGTL--LEDGMLKARKNNYLAAVVIA- 159
Query: 145 FPNFRENGCTIGLGYVD----------------LTKRVLGL--AEFLDDSHFTNVESALV 186
G + GL Y D LT+ V+ L AE L ++ ++ AL+
Sbjct: 160 -------GDSWGLAYADISTGEFLTTQGSNLEHLTQEVMRLQPAEILIPTNAPDL-GALL 211
Query: 187 ALGCKECLLPTEAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEP 246
G K LP E + +S C +R L R +FK R L + L
Sbjct: 212 RPGEKSASLP-ECLPASFCYCMRSQLPFSQGESRSRLLQKFKIRSL-EGLG--------- 260
Query: 247 VRDLVSGFEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLES 306
+A A G LL Y E ES+ +R Y+L ++ +D R L + ++
Sbjct: 261 ----CDHLPLAVRAAGGLLEYLEETQKESSIPLQPLRSYTLADFLIVDYQTRRNLEITQT 316
Query: 307 KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQD 366
D + SL ++RT TA MG R L WL QPLLDV I AR D + V++T+LRQD
Sbjct: 317 IRDGTYHGSLLWALDRTSTA-MGGRALRRWLLQPLLDVRGIAARQDTIAELVENTSLRQD 375
Query: 367 LRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY 426
LR+ LK+I D+ERL +A + + L +S +LP + S + + F + ++
Sbjct: 376 LRRLLKQIYDLERLTGRTGSGKANARDLGALAESLSKLPELASIVAEARSPFLKAL-QKV 434
Query: 427 LDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
LE+L + K A + S + E G +I S + L K E +R I +
Sbjct: 435 PTELETLAE-----KISAHLVESPPIHIKEGG--LIRSGINEMLDQRKALVEEDQRWIAN 487
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK-----IRKKLTT---QFIVLET 538
L + + + LK+ FG+ I++ + + IRK+ T ++I +E
Sbjct: 488 LEVDERAKTGV---QNLKVGFNKTFGYYISISRAKADQVPSNYIRKQTLTNEERYITIEL 544
Query: 539 RKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDV 598
++ + N + D YQ E + ++E+ ++EI ++++ ++ DV
Sbjct: 545 KERETRILNAQ----DDLYQLEYEIFVALREEVA--------VYAEIIRNISRAVAAADV 592
Query: 599 LLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF-IPNDCKL------ 651
L A+LA Y RP + + +I + RHP VE F +PN C+L
Sbjct: 593 LCGLAELA--VIQGYCRPQM--VEGREIYVVDGRHPVVEQSLPAGFFVPNTCRLGADTEN 648
Query: 652 -IRGKSW-----FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFAR 705
G S I+TGPN GKS ++RQ G+ +MAQ+GSFVP A + + D IF R
Sbjct: 649 NNSGNSHNPSPDLVILTGPNASGKSCYLRQTGLIQIMAQIGSFVPAKYAKLGICDRIFTR 708
Query: 706 VGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLV 765
VGA D G STFM EM ETA+IL AT +SL+++DE+GRGT+T+DG +AWA+ E+L
Sbjct: 709 VGAVDDLATGQSTFMVEMNETANILNHATAKSLVLLDEIGRGTATFDGLSIAWAVGEYLA 768
Query: 766 EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPG 825
EI++ T+FATH+HEL LA N VANY V+ + KL L++V+PG
Sbjct: 769 MEIKSRTIFATHYHELNELAGILPN---------VANYQVT--VKEMPDKLIFLHQVQPG 817
Query: 826 ACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
+S+GI A P V+ A++ ++E + A+
Sbjct: 818 GAQKSYGIEAGRLAGLPAVVIQRAKQVMGQIEQHSKIAM 856
>gi|386737592|ref|YP_006210773.1| DNA mismatch repair protein mutS [Bacillus anthracis str. H9401]
gi|384387444|gb|AFH85105.1| DNA mismatch repair protein mutS [Bacillus anthracis str. H9401]
Length = 886
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPVTEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|418599668|ref|ZP_13163148.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21343]
gi|374396326|gb|EHQ67567.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21343]
Length = 872
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 310/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V+ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVINRAQVILSEFE 785
>gi|281424692|ref|ZP_06255605.1| DNA mismatch repair protein MutS [Prevotella oris F0302]
gi|281401062|gb|EFB31893.1| DNA mismatch repair protein MutS [Prevotella oris F0302]
Length = 886
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 204/604 (33%), Positives = 301/604 (49%), Gaps = 41/604 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA+L Y EL + + D Y+RLD +R+L ++ + SL +
Sbjct: 248 ASGAILQYLELTQHTQINHITSLSRIEEDKYVRLDRFTIRSLELVAPMQEDGS--SLLNV 305
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT TA MG R+L WL PL DV IN RLDIV F RQ + + L R+ D+ER
Sbjct: 306 IDRTVTA-MGGRMLRRWLVFPLKDVAPINERLDIVDYFFQKPEFRQLIDEQLHRVGDLER 364
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
++ + R ++IV+L + + I+ A E + I E+ L+ ES+
Sbjct: 365 IISKVAVGRVSPREIVQLKNALDAVRPIKEACLYSENEALKRIGEQ-LNLCESIK----- 418
Query: 440 NKFIALVETSVDLD--QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
+E + LD QL +I+ YD L L+ + + + + ++ A + +
Sbjct: 419 ----TRIEKEIQLDPPQLITKGDVIADGYDDELDELREMSRNGKDYLLKIQEKEAEETGI 474
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
+LK+ FG+ + + K+ +I +T ++ +LK+ ++
Sbjct: 475 ---SSLKVGFNNVFGYYLEVRNT----FKDKVPEGWIRKQTLAQAERYITPELKEYEEKI 527
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
E+ + L + ++ F + A +L+ +D LLSFA +S Y RP
Sbjct: 528 LGAEEKILALEARLFSELVLAMQDFIPQIQINANLLARVDCLLSFA--KTSEENGYIRPQ 585
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
I+ +V DI RHP +E Q + ++PND L K +ITGPNM GKS +RQ
Sbjct: 586 IDDSEVLDI--SQGRHPVIETQLPLGERYVPNDVYLDTQKQQIMMITGPNMAGKSALLRQ 643
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
+ +L+AQVG FVP +RA I + D IF RVGA D G STFM EM E ++IL +
Sbjct: 644 TALIVLLAQVGCFVPAERAKIGLVDKIFTRVGASDNLSLGESTFMVEMTEASNILNNVSS 703
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFN 793
RSL++ DELGRGTSTYDG +AWAI E+L E+ RA TLFATH+HEL +
Sbjct: 704 RSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPKARARTLFATHYHELNEM--------- 754
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
K + NY+VS + K+ L K+ G + SFGIHVAE A P S+V A
Sbjct: 755 EKNFSRIKNYNVS--VKEVDGKVIFLRKLMKGGSEHSFGIHVAEIAGMPRSIVKRANAIL 812
Query: 854 AELE 857
ELE
Sbjct: 813 KELE 816
>gi|32731695|gb|AAP87090.1| DNA mismatch repair protein MutS [Staphylococcus aureus]
Length = 872
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 311/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAEPSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|159184268|ref|NP_353377.2| DNA mismatch repair protein, MutS family [Agrobacterium fabrum str.
C58]
gi|159139595|gb|AAK86162.2| DNA mismatch repair protein, MutS family [Agrobacterium fabrum str.
C58]
Length = 883
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 215/659 (32%), Positives = 322/659 (48%), Gaps = 52/659 (7%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+ S S + +D A L ++++ + +++ SL +NRT T G G RLL L PL D
Sbjct: 260 RESAASTLFIDPATRANLELVKTLS-GDRDGSLLHALNRTVTGG-GARLLAERLMSPLTD 317
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
INARLD V +DD +L LR LK ++D+ R + L R G + + + Q +
Sbjct: 318 PERINARLDAVAYLIDDVSLCDGLRDALKHVADMPRALSRLALERGGPRDLGAIRQGLVS 377
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMIS 463
I L L+ + L L + + + DL L+ +
Sbjct: 378 AEKIAVILD------GGLLPDELAKALRDLKALPGALEAMLGSMLADDLPLLKRDGGFLR 431
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
+ L ++ ++ R I L Q A + + K+LK+ G+ +T
Sbjct: 432 EGANPELDEVRALRDQSRRVIAGLQLQYADETGI---KSLKIKHNNVLGYFIEVTAGNAD 488
Query: 524 KIRK--KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
+ + +FI +T ++FT T+L L + E + E R+++ V
Sbjct: 489 VMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEAFERMVEAVVQ 548
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA--- 638
+E K+ A L+ +DV S A LA+ Y RP ++ I +G RHP VE
Sbjct: 549 QAEAIKAGALALAVIDVASSLAYLATE--QAYCRPIVDASMTFSI--KGGRHPVVEQALR 604
Query: 639 -QDWVNFIPNDCKLI------RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
Q FI N+C L G W ++TGPNMGGKSTF+RQ + ++AQ+GSFVP
Sbjct: 605 RQSAGPFIANNCDLSAVNGGKNGAIW--LLTGPNMGGKSTFLRQNALIAILAQIGSFVPA 662
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
+ A I V D +F+RVGA D RG STFM EM+ETA+IL ATDRSL+I+DE+GRGT+T+
Sbjct: 663 EAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGTATF 722
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG +AWA EHL E R LFATHFHELT L+ + N + +
Sbjct: 723 DGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNA-----------TMRVKE 771
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---TPSAVISDD 868
+ L++V PGA D+S+GI VA A P SVV ARE +LED P++ + DD
Sbjct: 772 WEGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDD 831
Query: 869 AKI-EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEK 926
+ ++ +R+ G ++ + LK F+ + M +EAL+ + +K +L K
Sbjct: 832 LPLFQIAVRREETRKA-----GPSKVEEALKSFNP---DEMTPREALDALYALKKELGK 882
>gi|417891937|ref|ZP_12535994.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21200]
gi|418306676|ref|ZP_12918452.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21194]
gi|341851223|gb|EGS92152.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21200]
gi|365246424|gb|EHM86977.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21194]
Length = 872
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 197/591 (33%), Positives = 312/591 (52%), Gaps = 59/591 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVL--ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNC 567
FG+ IT+ ++ ++F + +T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITR---ANLQNFEPSEFGYMRKQTLSNAERFITDELKEKEDIILGAEDKAIEL 510
Query: 568 QKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII 627
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +++
Sbjct: 511 EYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLELV 568
Query: 628 LEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
SRHP VE D+ +++PNDC+L +++ +ITGPNM GKST++RQV + +MAQ+G
Sbjct: 569 --ESRHPVVERVMDYNDYVPNDCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMG 625
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GR
Sbjct: 626 AYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGR 685
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N HV+
Sbjct: 686 GTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVHVA 736
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 737 A--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|392412916|ref|YP_006449523.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
gi|390626052|gb|AFM27259.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
Length = 870
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 200/607 (32%), Positives = 303/607 (49%), Gaps = 40/607 (6%)
Query: 257 APG-ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
AP A G +++Y E+ R Y L +YM LD + R L + + D + +
Sbjct: 231 APAVAAGTIINYVRQTRYEAPIHLKPPRVYHLGNYMVLDRSTTRNLEIFTNLKDGGTSGT 290
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L L++RT TA MG R + W PLLD+ EI+ R+D V AFVD T R +LR LK I
Sbjct: 291 LLKLLDRTLTA-MGARTIRSWTAYPLLDLREIHRRIDAVSAFVDSTITRGELRDALKGIG 349
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD 435
D+ER+ + R A + +V L S ++P + L+ G S L+ E L + D
Sbjct: 350 DLERIAGKISLRSANPRDLVYLRNSCEKIPVV---LKLLSGVESELVGE-----LRNADD 401
Query: 436 DDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
++ IA V L++G +I Y+ L L++ + I ++ + +
Sbjct: 402 LSYVAHAIASVLVDAPPVSLKDGG-LIRDGYNQELDELRSISHKGKEWIAAIEAREKEET 460
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+P LK+ FG+ +TK + K+ +I +T + ++ LK+ +
Sbjct: 461 GIP---NLKVGYNRVFGYYIEVTKSYQSKV----PASYIRKQTLANAERYITDDLKEYEN 513
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
+ E ++E+ N + + ++ A+ + LD +LS A+ A+ Y R
Sbjct: 514 KVLNAQERIVEIEEEIFNLLRTRLLEVIGRIQATASAIGTLDAILSLAETAAV--RGYVR 571
Query: 616 PDINPPDVGDIILEGSRHPCVEAQD-WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
P ++ D +I + RHP VE D ++PND L R IITGPNM GKST++R
Sbjct: 572 PTVHEGD--EIKILDGRHPVVETFDSRETYVPNDVILNRTSDQILIITGPNMAGKSTYMR 629
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q + ++M Q+G FVP A I + D IF R+GA D G STFM EM ETA IL A+
Sbjct: 630 QTALIVIMGQMGGFVPASEAQIGLVDRIFTRIGAADYLAYGQSTFMVEMNETADILHNAS 689
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP--TLFATHFHELT--ALAHENAN 790
RSL+++DE+GRGTST+DG +AWA+ E+L + TLFATH+HEL L E
Sbjct: 690 VRSLVLLDEVGRGTSTFDGLSIAWAVTEYLHDRADGGPRTLFATHYHELVDIPLVKERVR 749
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
FN + ++ L K+ PG C +S+GI VA+ A P++VV A+
Sbjct: 750 NFNIA-------------VKEWKDRIVFLRKIVPGGCSRSYGIQVAKLAGIPDAVVGRAQ 796
Query: 851 EKAAELE 857
E + LE
Sbjct: 797 EILSNLE 803
>gi|421076048|ref|ZP_15537050.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
gi|392525907|gb|EIW49031.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
Length = 864
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 203/614 (33%), Positives = 316/614 (51%), Gaps = 52/614 (8%)
Query: 255 EIAPGALGALLSYA-ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
++A A+G LL Y + + + ++ N I Y+ Y+ +DS +MR L V + D K
Sbjct: 227 DVALAAIGCLLYYLHQTVKTDLSHINRLI-NYNAFEYLTIDSTSMRNLEVTRNVRDGGKK 285
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
+L +++ T TA MG RLL WL+ PL++ I R D + ++ LRQ + + L
Sbjct: 286 DTLLYVLDYTKTA-MGGRLLKKWLEYPLMNTTHIIQRQDSIAELLEKPTLRQTIHETLAN 344
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
I D+ER++ +E A + ++ L S + LP I+ LQ+ F S + YL
Sbjct: 345 IYDLERILTRIEVGTASARDLIALKSSLVVLPTIKEQLQKTNTIFLSNL-HFYLH----- 398
Query: 434 TDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
H++ + LV+T++ E G +I YD L L ++ + +
Sbjct: 399 ---THVD-LVTLVDTAIVDNPPFSVREGG--LIKRGYDLELDELHTIARDSKQFVQDIET 452
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ + + K+LK+ FG+ +T + ++ +T + ++ +
Sbjct: 453 RERENTGI---KSLKVGYNKVFGYYIEVTHSHTASV----PLSYVRKQTLANAERYITPE 505
Query: 550 LKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD 604
LK+ LG Q + V EY+ L +++ + + + A L++LD ++S ++
Sbjct: 506 LKEFESKILGAQEKIVTIEYR-----LFSKIRDHIKVYIKEIQETARQLAQLDAIISLSE 560
Query: 605 LASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITG 663
+A Y RP I +I ++ RHP VE F+PND +L + IITG
Sbjct: 561 VA--FRNNYIRPTIT--QTREITIKDGRHPIVERLLKRELFVPNDSELNHHSNEIMIITG 616
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKST++RQV + +LMAQ+GSF+P A IS D IF RVGA D G STFM EM
Sbjct: 617 PNMAGKSTYMRQVALLVLMAQIGSFIPAREAIISPVDRIFTRVGASDDLSTGQSTFMVEM 676
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
E A ILK AT +SLII+DE+GRGTST+DG +A A+ E++ E ++A TLFATH+HELT
Sbjct: 677 NEVAQILKHATSQSLIILDEIGRGTSTFDGMSIARAVIEYIKERVKAKTLFATHYHELTE 736
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LA + V NY V+ + + L ++ PG D+S+GIHVA+ A P+
Sbjct: 737 LADYHK---------IVKNYSVA--VKERGSDVVFLRRIIPGGADKSYGIHVAQLAGLPQ 785
Query: 844 SVVTLAREKAAELE 857
V+ A+E ELE
Sbjct: 786 KVIKRAQELLVELE 799
>gi|258423864|ref|ZP_05686749.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9635]
gi|418889088|ref|ZP_13443224.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1524]
gi|257845893|gb|EEV69922.1| DNA mismatch repair protein MutS [Staphylococcus aureus A9635]
gi|377754598|gb|EHT78507.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 872
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 199/593 (33%), Positives = 309/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKFN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PNDC+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNDCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|433546742|ref|ZP_20503046.1| DNA mismatch repair protein MutS [Brevibacillus agri BAB-2500]
gi|432181962|gb|ELK39559.1| DNA mismatch repair protein MutS [Brevibacillus agri BAB-2500]
Length = 857
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 203/602 (33%), Positives = 312/602 (51%), Gaps = 35/602 (5%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
A+ ALL Y S +++Y Y+++D + R L + E+ D K SL
Sbjct: 218 AAVNALLYYIGTTQKRSLAHMRLLKRYDSKQYLQMDGFSRRNLELTETIRDKTKKGSLLW 277
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
L++RT TA MG RLL W+++PLL E++ARLD V+A D LR DLR L + D+E
Sbjct: 278 LLDRTQTA-MGGRLLRRWIERPLLGRAELDARLDAVEALKSDLLLRSDLRTCLDNVYDLE 336
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL + A + +++L S +P L+++ Q ++ + + ++ D
Sbjct: 337 RLAGRISYGNANARDLIQLRLSLEAVP----ELKRHLSQTNAPVLQELAQGMDECAD--- 389
Query: 439 LNKFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
L F+ ALV+ + E G MI + YD L L + + I L + S+ +
Sbjct: 390 LVSFLQAALVDDP-PISVREGG--MIRTGYDEYLDKLHSASRDGKTWIAQLEQ---SERE 443
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
++LK+ FG+ ++K I ++ +T + ++ +LK+
Sbjct: 444 ATGIRSLKVGFNKVFGYYIEVSKS---NIANVPAGRYERKQTLANAERYITPELKEREAL 500
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
+ E+ + +L V +SLA ++ +DVL +FA ++ + RP
Sbjct: 501 ILEAEEKMIELEYQLFTAVRSEIAGHIPRLQSLAERIASVDVLQAFATVSDE--RGFVRP 558
Query: 617 DINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
D G+ ++ RHP VEA + ++ ND ++ + +ITGPNM GKST++RQ
Sbjct: 559 QF--ADDGEYVIVDGRHPVVEAVLEREKYVANDVRMNQDSRQVLLITGPNMAGKSTYMRQ 616
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
+ + +MAQ+G FVP A +S+ D IF R+GA D + G STFM EMLET L+ AT
Sbjct: 617 IALITVMAQIGCFVPAKEAKLSIVDQIFTRIGAADDLVGGHSTFMVEMLETRHALQKATA 676
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SLI++DE+GRGTSTYDG LA A+ E++ + I+A TLF+TH+HELT LA
Sbjct: 677 KSLILLDEIGRGTSTYDGMALAQAVIEYICQRIKAKTLFSTHYHELTGLA---------D 727
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
M GV N V+A + KL L+K+E G D+S+GIHVAE A P V+ AR A
Sbjct: 728 TMKGVVN--VNARCEERDGKLLFLHKIEEGRADKSYGIHVAELAEMPVWVIERARSILAG 785
Query: 856 LE 857
LE
Sbjct: 786 LE 787
>gi|347531827|ref|YP_004838590.1| DNA mismatch repair protein MutS [Roseburia hominis A2-183]
gi|345501975|gb|AEN96658.1| DNA mismatch repair protein MutS [Roseburia hominis A2-183]
Length = 874
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 217/684 (31%), Positives = 340/684 (49%), Gaps = 60/684 (8%)
Query: 260 ALGALLSYAELLSDESNYGN--YYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
A GALL Y L + N N I YS YM +DS+ R L ++E+ + K SL
Sbjct: 230 AAGALLKY--LYETQKNDLNNISVIHPYSTGKYMIIDSSTRRNLELVETLREKQKRGSLL 287
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
++++T TA MG RLL +++QPL+D EI R D + R++LR++L I D+
Sbjct: 288 WVLDKTKTA-MGARLLRSYVEQPLIDKAEIEKRQDAICELNQHVITREELREYLNPIYDL 346
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + A + ++ S LP I+S L ++ + I+E D D
Sbjct: 347 ERLITRVTYLTANPRDLIAFRSSIAMLPPIKSLLGDFQCELLGEIRE----------DMD 396
Query: 438 HLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
L + AL++ ++ + + G +I Y+ + + + + + L +
Sbjct: 397 TLEELCALIDRAIMEEPPISVRDGG--LIKDGYNEDVDKYRKAKTEGKTWLAELEAKERE 454
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ K LK+ FG+ +T + + F+ +T + ++ +LK+L
Sbjct: 455 KTGI---KNLKIKYNKVFGYYLEVTNS----YKDLVPDYFMRKQTLANAERYITPELKEL 507
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
D ++ + +L V T + A ++ LDV +S A +A Y
Sbjct: 508 EDMILGAEDKLVTLEYDLFCEVRSTIAAEVVRIQRTAKAVAGLDVFVSLALVADQ--NNY 565
Query: 614 TRPDINPPDVGDIILEGSRHPCVEAQDWVN---FIPNDCKLIRGKSWFQIITGPNMGGKS 670
RP IN + DI +G RHP VE +N FI ND L G IITGPNM GKS
Sbjct: 566 CRPKINENGIIDI--KGGRHPVVEKM--INNDMFIDNDTYLDNGNHRISIITGPNMAGKS 621
Query: 671 TFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASIL 730
T++RQ + +LMAQ+GS+VP A I + D IF RVGA D G STFM EM E A+IL
Sbjct: 622 TYMRQTALIVLMAQLGSYVPAASAKIGIVDRIFTRVGASDDLASGQSTFMVEMNEVANIL 681
Query: 731 KGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHEN 788
+ AT SL+I+DE+GRGTSTYDG +AWA+ EH+ + A TLFATH+HELT L +
Sbjct: 682 RNATSNSLLILDEIGRGTSTYDGLSIAWAVVEHISNPKLLGAKTLFATHYHELTELEGKL 741
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
N V NY V+ + + L K+ G D+S+GI VA+ A P+SV+
Sbjct: 742 NN---------VNNYCVA--VKEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDSVIAR 790
Query: 849 AREKAAEL--EDFTPSAVISDDAKIEVGSKRKRIS-DPNDMSRGA----ARAHQFLKEFS 901
A+E EL D T ++ + ++ GSK+K+ D D+++ + R ++E
Sbjct: 791 AKEIVEELSANDITE---VARNISVDTGSKKKKEKLDEVDLTQMSLFDTVRDDDIIEELR 847
Query: 902 DMPLETMDLKEALERVKRMKDDLE 925
++ + + EAL ++ +++ ++
Sbjct: 848 NVDVGNLTPIEALNKLYELQNKVK 871
>gi|258452594|ref|ZP_05700600.1| DNA mismatch repair protein mutS [Staphylococcus aureus A5948]
gi|257859812|gb|EEV82654.1| DNA mismatch repair protein mutS [Staphylococcus aureus A5948]
Length = 872
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 311/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDALRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|331269502|ref|YP_004395994.1| DNA mismatch repair protein MutS [Clostridium botulinum BKT015925]
gi|329126052|gb|AEB75997.1| DNA mismatch repair protein MutS [Clostridium botulinum BKT015925]
Length = 895
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 214/664 (32%), Positives = 352/664 (53%), Gaps = 57/664 (8%)
Query: 206 KTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALL 265
K + R V LTE+ +T F + + + E D+V + G L ++
Sbjct: 181 KVISSIRERFDVALTEKSETFFIENACLNLSKQFADFNTEDYEDIV--IKGCNGLLNYII 238
Query: 266 SYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCT 325
+ N +YY +++D Y+ +D + R L + E+ D K SL ++++T T
Sbjct: 239 ETQKTTLIHINKIDYY---HTVD-YLSIDINSRRNLELTETLRDKAKKGSLLWVLDKTTT 294
Query: 326 AGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLE 385
A MG RLL W++QPL+ I R + V+ +++ L D+R++L+ + DIERL +
Sbjct: 295 A-MGGRLLRKWVEQPLIQKYIIEMRQNAVEEIMNNVPLCDDVRENLRDVYDIERLAGKIS 353
Query: 386 KRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIAL 445
+ ++++ L S LP I+S L+ + S L+K Y D L+ L D L L
Sbjct: 354 SKNVNAKELLSLKNSIGNLPAIKSLLKNFN---SDLLKNIY-DKLDCLEDIYSLLDNAIL 409
Query: 446 VETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKL 505
S+ + E G +I Y++ + L+ + ++ I SL +Q + L K+LK+
Sbjct: 410 ASPSLSIK--EGG--IIKDGYNSIIDELRMAKSHGKQWIASLEEQERT---LTGIKSLKV 462
Query: 506 DKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKV 560
FG+ ITK ++ + ++I +T + ++ +LK+ LG Q +K+
Sbjct: 463 KYNKVFGYYIEITKSNLDQVPE---NRYIRKQTLANCERYITPELKEVEEKILGAQ-EKL 518
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIF--KSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
+E N E+ +R+ + EI+ K A ++SE+DVL S A +A Y +P+I
Sbjct: 519 MELEYNLFIEIRDRIEK------EIYRIKGSAKLISEIDVLGSLAVVA--LENNYCKPEI 570
Query: 619 NPPDVGDIILEGSRHPCVEA---QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
+G++ ++ RHP VE +D +F+ ND L +ITGPNM GKST++RQ
Sbjct: 571 KT--IGELYIKEGRHPVVEKMIPRD--SFVSNDTVLDNKDQQLLLITGPNMAGKSTYMRQ 626
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + ++AQ+GSFVP +AS+ + D IF R+GA D +G STFM EM E A+IL AT
Sbjct: 627 VALINVLAQIGSFVPAKKASVVICDKIFTRIGASDDLAKGKSTFMVEMWEVANILNNATS 686
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFN 793
+SLI++DE+GRGTSTYDG +AW++ E++ + ++++ TLFATH+HELT+L
Sbjct: 687 KSLILLDEVGRGTSTYDGLSIAWSVIEYICKNNKLKSKTLFATHYHELTSLEG------- 739
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
++ GV NY ++ + + L K+ G D+S+GI VA+ A P+ V+ A+E
Sbjct: 740 --KIEGVKNYSIA--VKKVDDDIIFLRKIIKGGADESYGIEVAKLAGIPKDVIDRAKEIL 795
Query: 854 AELE 857
LE
Sbjct: 796 VTLE 799
>gi|330507603|ref|YP_004384031.1| DNA mismatch repair protein MutS [Methanosaeta concilii GP6]
gi|328928411|gb|AEB68213.1| DNA mismatch repair protein MutS [Methanosaeta concilii GP6]
Length = 877
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 222/703 (31%), Positives = 350/703 (49%), Gaps = 71/703 (10%)
Query: 251 VSGFEIAPGALGALLSYA-----ELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLE 305
+ G ++ A GA+LSY +LL + ++ YS YM LD +R L +
Sbjct: 218 LEGRGLSQRACGAVLSYLNASRFDLLGHLKD-----VQIYSGSDYMVLDEVTVRNLEITR 272
Query: 306 SKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQ 365
+ D ++ +L +++T TA MG R L WL+ PL I RLD V+ + L +
Sbjct: 273 NIRDRSRRGTLLEFLDQTRTA-MGARTLARWLQMPLQSEQAIARRLDGVEELASKSLLHR 331
Query: 366 DLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKER 425
L + LK SD+ERL+ + + A +++ L + LP ++ L + S
Sbjct: 332 SLAEELKGTSDLERLLSRISCKSASPKELSVLKSTLEMLPRLQEILMDDQSSAQS----S 387
Query: 426 YLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLER 482
YL L S L+ ++L+E S+ D + +G +I YD + L+ E L
Sbjct: 388 YLQDLSSRLSP--LDDIVSLIERSIMEDPPVHVRDGG-VIREGYDPEIDQLR---ELLRD 441
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
+ + S+ + K+LK+ FG+ +++ + + +I +T +G
Sbjct: 442 GRGWISRLEGSEKERTGIKSLKIAFNNVFGYYIEVSRANLHLVPQN----YIRKQTLANG 497
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
+F +LK + + E + ++EL +V + + + + AT L+ELDVL+S
Sbjct: 498 ERFVTPELKDMESRVLSAQERSVSLEQELFYKVRDLVASKAGVIQERATALAELDVLISL 557
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIIT 662
A S+ RP+ N G I + SRHP ++ F+PND L ++ I+T
Sbjct: 558 A--TSAKENNMIRPEFNQE--GRISIRSSRHPVLDKAMRGAFVPNDVLLDTDRNRLIILT 613
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKSTF+RQ+ + +MAQ GSFVP AS+S+ D +F RVGA D G STFM E
Sbjct: 614 GPNMAGKSTFMRQIALTAIMAQTGSFVPAAYASLSLVDQVFTRVGAYDDLSAGQSTFMVE 673
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
M E A IL AT +SL+++DE+GRGTST+DG LAWAI E+L E I+ ++FATH+H+LT
Sbjct: 674 MTEIAHILTSATRKSLVLLDEVGRGTSTFDGLSLAWAISEYLHESIKCKSVFATHYHQLT 733
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L + GV NY ++ D + +T L V PGA D+S+G+HVA A P
Sbjct: 734 DL---------ESILSGVRNYSIAVKEDKGT--ITFLRTVVPGATDKSYGVHVARLAGVP 782
Query: 843 ESVVTLAREKAAELEDFTPSAVISDDAKIEVGS---KRKRIS--------DPNDMSRGAA 891
+V A + E+E +A ++ GS ++R S D N+ A
Sbjct: 783 RTVTKRADQILREIE---------KEALMQPGSGGRSQRRSSRYTQLIFFDGNEDGNTAG 833
Query: 892 RAHQ-----FLKEFSDMPLETMDLKEALERV---KRMKDDLEK 926
+ L+E + L+ M +EAL+R+ +RM+ + E+
Sbjct: 834 EVERDKKDPILEEIESLDLDMMTPREALDRLAQYQRMQREREE 876
>gi|340351558|ref|ZP_08674470.1| DNA mismatch repair protein MutS [Prevotella pallens ATCC 700821]
gi|339617842|gb|EGQ22455.1| DNA mismatch repair protein MutS [Prevotella pallens ATCC 700821]
Length = 889
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 199/602 (33%), Positives = 307/602 (50%), Gaps = 37/602 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA++ Y E + + + Y+RLD +R+L ++ + SL G+
Sbjct: 248 AAGAIMQYLEQTQHTHISHITSLARIEEEKYVRLDRFTIRSLELVAPMQE--DGLSLLGV 305
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT T MG R+LH WL PL DV IN RLDIV+ + + R L L R+ D+ER
Sbjct: 306 VDRTITP-MGGRMLHRWLVFPLKDVKPINERLDIVEYYFREPDFRHCLDDQLHRMGDLER 364
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
++ + R +++V+L + + I+SA + + E+ L+ ES+ D
Sbjct: 365 IISRVAAGRVSPREVVQLKNALSAIQPIKSACLYSSNEALKRVGEQ-LNLCESIRDRIEQ 423
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
E D QL +I+ ++ L L++ +E+ ++ + + ++ A+ +
Sbjct: 424 -------EIMSDPPQLVAKGGVIAHGFNAELDELRSIRENGKQVLLDIQEKEAAKTGI-- 474
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+LK+ FG+ + + K+ +I +T ++ +LK+ +
Sbjct: 475 -NSLKIGFNNIFGYYLEVRNT----FKNKVPQDWIRKQTLAQAERYITPELKEYEAKILG 529
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
E+ + L N ++Q + + A +L+ LD LLSFA++A Y RP ++
Sbjct: 530 ADEKILILEARLFNELVQDMQEYIPQIQINANLLARLDCLLSFANIAEE--NKYVRPMVD 587
Query: 620 PPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
V DI + RHP +E Q + +IPND L + +ITGPNM GKS +RQ
Sbjct: 588 DSMVIDI--KKGRHPVIETQLPLGEQYIPNDVYLDNEQQQIMMITGPNMAGKSALLRQTA 645
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ +L+AQVG FVP + A I + D +F RVGA D G STFM EM E A+IL T RS
Sbjct: 646 LIVLLAQVGCFVPAESARIGLVDKVFTRVGASDNISLGESTFMVEMTEAANILNSVTPRS 705
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP--TLFATHFHELTALAHENANEFNTK 795
L++ DELGRGTSTYDG +AWAI E+L E+ RA TLFATH+HEL +A K
Sbjct: 706 LVLFDELGRGTSTYDGISIAWAIVEYLHEQPRATARTLFATHYHELNEMA---------K 756
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+ N++VS + + K+ L K+E G + SFGIHVA+ A P+S+V A E
Sbjct: 757 NFHRIKNFNVS--VKEVNGKIIFLRKLERGGSEHSFGIHVADIAGMPKSIVKRANIVLKE 814
Query: 856 LE 857
LE
Sbjct: 815 LE 816
>gi|295696238|ref|YP_003589476.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
gi|295411840|gb|ADG06332.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
Length = 879
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 203/596 (34%), Positives = 307/596 (51%), Gaps = 40/596 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
AL A+ SY E ++ +YM +D+ A R L ++++ + + SL L
Sbjct: 223 ALAAIASYIEETQRRQLVHWKPVQPLHDATYMAVDAFARRNLELVQTVREGRRTGSLLWL 282
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++ T TA MG RLL WL++PL+D I R D ++ V + R LR+ L+R+ D+ER
Sbjct: 283 LDETVTA-MGGRLLRQWLEKPLIDPVAIARRQDGIEELVGEWIRRNQLREDLRRVYDLER 341
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK--ERYLDPLESLTDDD 437
L+ + AG + + + QS + P + + L G SS++ ER LDP E + D
Sbjct: 342 LLGRVSYGSAGPRDLRAVAQSLSQAPKLAAGLA---GAGSSILADIERRLDPCEEVRD-- 396
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
L++ +A D +I + L L+ I +L +Q +
Sbjct: 397 LLDRALA-----DDPPATAKEPGVIRDGFSPELDELRRASREGRSWIAALEQQERERTGI 451
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
K+LK+ FG+ +TK + ++ + +T ++ +LK++ +
Sbjct: 452 ---KSLKIGYNRVFGYYIEVTKANLALVPREYERR----QTLAASERYVTPELKEMESRI 504
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
E + + +L + T V + LA ++ELDVL + A++A+ YTRP
Sbjct: 505 LDAQERAEAIEYQLFVELRSTVVKALPRLQRLAGAMAELDVLCALAEVAAK--RRYTRPV 562
Query: 618 INPPDVGDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
++ D I + G RHP VEA D F+PND L +ITGPNM GKST++RQ
Sbjct: 563 VD--DSSVIEIRGGRHPVVEAVLPDG-TFVPNDTFLDGDHRRVALITGPNMAGKSTYMRQ 619
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
V + +L+AQVGSFVP D A I + D +F R+GA D + G STFM EM+E A+IL+ AT
Sbjct: 620 VALIVLLAQVGSFVPADFARIGIVDRLFTRIGAADDLVAGQSTFMVEMVELATILRNATP 679
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIR--APTLFATHFHELTALAHENANEFN 793
RSLII+DE+GRGTSTYDG +A A E++ + R A TLFATH+HELT LA E
Sbjct: 680 RSLIILDEIGRGTSTYDGMSIARAAVEYIHDPTRVGARTLFATHYHELTGLADE------ 733
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
+ GV N+ DS + L+++ D+S+GIHVA A PE ++ A
Sbjct: 734 ---LPGVHNFSTEVREDSGG--IVFLHRLVDRPADRSYGIHVARLAGLPEDLLERA 784
>gi|160892634|ref|ZP_02073424.1| hypothetical protein CLOL250_00164 [Clostridium sp. L2-50]
gi|156865675|gb|EDO59106.1| DNA mismatch repair protein MutS [Clostridium sp. L2-50]
Length = 865
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 216/647 (33%), Positives = 324/647 (50%), Gaps = 74/647 (11%)
Query: 262 GALLSYAELLSDESNYGNY--YIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
G LL Y L + N+ + +I YS+D +M LDSA R L + E+ D K SL +
Sbjct: 232 GVLLQY--LHETQKNFLAHINHIVLYSIDDFMILDSATRRNLELCETLRDKQKRGSLLWV 289
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L ++QPL+ +I ARLD ++ +D R ++R++L I D+ER
Sbjct: 290 LDKTKTA-MGARMLRSMIEQPLIYKKDIEARLDAIEQLNNDMINRDEMREYLNPIYDLER 348
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
LM + R A + ++ S LPYIR LQ Y + I E+ +D L+ + D
Sbjct: 349 LMTRISLRSANPRDMIAFKTSLSYLPYIRQLLQIYPDGLLADIYEK-MDELQDIYD---- 403
Query: 440 NKFIALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L+E S++ D E G + Y + LK+ + + + L ++
Sbjct: 404 -----LLERSINDDPPILIREGG--IFKDGYLEEIDTLKSAKTDGKTWLAELEEREKQKT 456
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K L++ FG+ F +T + + FI +T + ++T +L L
Sbjct: 457 GI---KNLRIKFNKVFGYYFEVTNS----YKDLVPEYFIRKQTLANSERYTTEELDNLAG 509
Query: 556 Q--------YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLAS 607
Y E Y + ++ +++ T A ++ LD L S + +AS
Sbjct: 510 SILGSEDKLYALEYETYIALRDKIAGEILRVQNT--------ARQIALLDCLCSLSYVAS 561
Query: 608 SCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNM 666
+ + RP+IN V DI + RHP VE + FI ND L +S IITGPNM
Sbjct: 562 A--NQFVRPEINEDGVIDI--KEGRHPVVEKMMNNGMFISNDTYLNNFESRISIITGPNM 617
Query: 667 GGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLET 726
GKST++RQ + +LMAQ+GSFVP A+I + D IF RVGA D G STFM EM E
Sbjct: 618 AGKSTYMRQTALIVLMAQIGSFVPAASANIGICDRIFTRVGASDDLASGQSTFMVEMSEV 677
Query: 727 ASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTAL 784
A+IL+ AT SL+I+DE+GRGTSTYDG +AWA+ E++ E + A TLFATH+HELT L
Sbjct: 678 ANILRNATKNSLLILDEIGRGTSTYDGLSIAWAVVEYISNSELLGAKTLFATHYHELTEL 737
Query: 785 AHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPES 844
++ V NY ++ D + L K+ G D+S+GI VA+ A P+
Sbjct: 738 E---------GKLSSVNNYCIAVKEDGDD--IVFLRKIVKGGADRSYGIQVAKLAGVPDI 786
Query: 845 VVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAA 891
V+ A E +L D ++ +K K I ND + A+
Sbjct: 787 VIDRANEICNQLID------------TDITTKLKDIKITNDFHKSAS 821
>gi|75909393|ref|YP_323689.1| DNA mismatch repair protein MutS [Anabaena variabilis ATCC 29413]
gi|123608965|sp|Q3M892.1|MUTS_ANAVT RecName: Full=DNA mismatch repair protein MutS
gi|75703118|gb|ABA22794.1| DNA mismatch repair protein MutS [Anabaena variabilis ATCC 29413]
Length = 854
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 228/728 (31%), Positives = 360/728 (49%), Gaps = 61/728 (8%)
Query: 156 GLGYVDLTKRVLGLAEFL--DDSHFTNVESALVALGCKECLLPTEA------VKSSECKT 207
GL Y D++ EFL DS + L+ L E L+PT A ++ E
Sbjct: 163 GLAYADIST-----GEFLTTQDSDLERLTQELMRLQPSEVLVPTNAPDLGTLLRPGETSP 217
Query: 208 -LRDAL--TRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGAL 264
L + L + C + +++ ++ + R + L R S+E + +A A G L
Sbjct: 218 HLPECLPPSFCYSLRSQQPFSQAEARSTL--LQRFKVRSLEGLG--CDHLPLAVRAAGGL 273
Query: 265 LSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTC 324
L Y E +R Y++ Y+ +D+ R L + ++ D + SL +++T
Sbjct: 274 LEYVEDTQKAGQVSLQRLRTYTITDYLIVDNQTRRNLEITQTVRDGTFHGSLLWALDKTS 333
Query: 325 TAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNL 384
TA MG R L WL QPLLD+ I++R D +Q V +T LRQDLR L++I D+ERL
Sbjct: 334 TA-MGSRALRRWLLQPLLDIKGISSRQDTIQELVTNTRLRQDLRHLLRQIYDLERLTGRA 392
Query: 385 EKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP-LESLTDDDHLNKFI 443
A + +V L S RLP + + + F +++ + P LE L H +
Sbjct: 393 SSGTANARDLVALADSLSRLPELANLVIDAHSPFLKALQK--VPPILEELAQKIHAH--- 447
Query: 444 ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKAL 503
LVE S L E G +I + L K E+ + I +L + +P+ L
Sbjct: 448 -LVE-SPPLHLKEGG--LIRPGVNPLLDERKATVEADHQWIANLEVDERARTGIPL---L 500
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
K+ FG+ I++ + ++ +I +T K+ ++ +LK+ + ++
Sbjct: 501 KVGFNETFGYYISISRAKADQV----PANYIRKQTLKNEERYITPELKEREARILTARDD 556
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD-INPPD 622
+ E+ + + +E + L+ ++ DVL A+LA Y RP+ +N +
Sbjct: 557 LHKLEYEVFVTLREEVGEQAEAIRHLSRAVAAADVLCGLAELA--VYQGYCRPEMVNGRE 614
Query: 623 VGDIILEGSRHPCVEAQDWVNF-IPNDCKLIRGKSWFQ-----IITGPNMGGKSTFIRQV 676
+ I++G RHP VE F +PN +L + Q I+TGPN GKS ++RQV
Sbjct: 615 IA--IIDG-RHPVVEQSLPAGFFVPNSTQLGSNEETHQLPDLIILTGPNASGKSCYLRQV 671
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
G+ LMAQ+GSFVP A + + D IF RVGA D G STFM EM ETA+IL AT R
Sbjct: 672 GLIQLMAQIGSFVPAKSARLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATSR 731
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SL+++DE+GRGT+T+DG +AWA+ E++ EIR+ T+FATH+HEL LA N
Sbjct: 732 SLVLLDEIGRGTATFDGLSIAWAVAEYIATEIRSRTIFATHYHELNELAGMLPN------ 785
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
VANY V+ + ++ L++V+PG D+S+GI A P V+ A++ ++
Sbjct: 786 ---VANYQVT--VKELPDQIIFLHQVQPGGADKSYGIEAGRLAGLPTVVIQRAKQVMGQI 840
Query: 857 EDFTPSAV 864
E + A+
Sbjct: 841 EKHSKIAM 848
>gi|399055634|ref|ZP_10743329.1| DNA mismatch repair protein MutS [Brevibacillus sp. CF112]
gi|398046843|gb|EJL39427.1| DNA mismatch repair protein MutS [Brevibacillus sp. CF112]
Length = 857
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 203/602 (33%), Positives = 312/602 (51%), Gaps = 35/602 (5%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
A+ ALL Y S +++Y Y+++D + R L + E+ D K SL
Sbjct: 218 AAVNALLYYIGTTQKRSLAHMRLLKRYDSKQYLQMDGFSRRNLELTETIRDKTKKGSLLW 277
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
L++RT TA MG RLL W+++PLL E++ARLD V+A D LR DLR L + D+E
Sbjct: 278 LLDRTQTA-MGGRLLRRWIERPLLGRAELDARLDAVEALKSDLLLRSDLRTCLDNVYDLE 336
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL + A + +++L S +P L+++ Q ++ + + ++ D
Sbjct: 337 RLAGRISYGNANARDLIQLRLSLEAVP----ELKRHLSQTNAPVLQELAQGMDECAD--- 389
Query: 439 LNKFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
L F+ ALV+ + E G MI + YD L L + + I L + S+ +
Sbjct: 390 LASFLQAALVDDP-PISVREGG--MIRTGYDEYLDKLHSASRDGKTWIAQLEQ---SERE 443
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
++LK+ FG+ ++K I ++ +T + ++ +LK+
Sbjct: 444 ATGIRSLKVGFNKVFGYYIEVSKS---NIANVPAGRYERKQTLANAERYITPELKEREAL 500
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
+ E+ + +L V +SLA ++ +DVL +FA ++ + RP
Sbjct: 501 ILEAEEKMIELEYQLFTAVRSEIAGHIPRLQSLAERIASVDVLQAFATVSDE--RGFVRP 558
Query: 617 DINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
+ D G+ ++ RHP VEA + ++ ND ++ + +ITGPNM GKST++RQ
Sbjct: 559 QL--ADDGEYVIVDGRHPVVEAVLEREKYVANDVRMNQDSRQVLLITGPNMAGKSTYMRQ 616
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
+ + +MAQ+G FVP A +S+ D IF R+GA D + G STFM EMLET L+ AT
Sbjct: 617 IALITVMAQIGCFVPAKEAKLSIVDQIFTRIGAADDLVGGHSTFMVEMLETRHALQKATA 676
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTK 795
+SLI++DE+GRGTSTYDG LA A+ E++ + I A TLF+TH+HELT LA
Sbjct: 677 KSLILLDEIGRGTSTYDGMALAQAVIEYICQRIGAKTLFSTHYHELTGLA---------D 727
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
M GV N V+A + KL L+K+E G D+S+GIHVAE A P V+ AR A
Sbjct: 728 TMKGVVN--VNARCEERDGKLLFLHKIEEGRADKSYGIHVAELAEMPVWVIERARSILAG 785
Query: 856 LE 857
LE
Sbjct: 786 LE 787
>gi|149200634|ref|ZP_01877637.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155]
gi|149136283|gb|EDM24733.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155]
Length = 837
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 298/583 (51%), Gaps = 37/583 (6%)
Query: 291 MRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
M +D + R L ++E +KN +L +++ C+ MG RLL WL +PL ++ I R
Sbjct: 267 MIVDRVSQRTLELVEPIFRDSKNSTLISVLDE-CSTPMGSRLLREWLLRPLTNIEAITQR 325
Query: 351 LDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
D + +F D L ++LR+ + + DIER++ L A +++ + + +P I S
Sbjct: 326 QDTLSSFCSDQMLLEELRESFRTVRDIERILTRLNLGTANARELQTIAWALKAIPDIESI 385
Query: 411 LQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD--QLENGEYMISSSYDT 468
+ + S IK R + LTD L++ D L++G +IS Y+
Sbjct: 386 ISYVDSDLLSDIKSRLFN-FPELTD--------TLLQALTDEPPATLKDGG-IISDGYND 435
Query: 469 GLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKK 528
L + + + Q + K LK+ FG+ ++K + +
Sbjct: 436 QLDHFRKGSREGKAWLARFEAQEKERTGI---KKLKIGYNRVFGYYIELSKINSAQAPE- 491
Query: 529 LTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKS 588
+I +T + ++ +LK++ D E+ K + EL + ++ +S
Sbjct: 492 ---DYIRKQTLANAERYITPELKEIEDSVLGAEEKAKALEYELFQELRLKVTEKTKEIQS 548
Query: 589 LATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPN 647
A L+ELD L + A +A Y RP + + I + RHP VEA D F+PN
Sbjct: 549 TAIALAELDCLANLAYVA--LKRSYIRPQLC--EEKKINISDGRHPVVEAAMDAGIFVPN 604
Query: 648 DCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVG 707
D + ++ ++TGPNM GKST+IRQV + +MAQ+GSF+PC +A I + D I+ R+G
Sbjct: 605 DTDMNDHQASINLVTGPNMAGKSTYIRQVALLTIMAQMGSFIPCSKAEIGITDSIYTRIG 664
Query: 708 AGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE 767
A D RG STFM EM+ETA+IL A RSL+I+DE+GRGTSTYDG LAWAI EHL +
Sbjct: 665 AADDLSRGQSTFMVEMVETANILNNAGPRSLVILDEIGRGTSTYDGLSLAWAIAEHL-HD 723
Query: 768 IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGAC 827
TLFATH+HELT L + V N+ V+ H + K+ L+K++ GA
Sbjct: 724 AGCLTLFATHYHELTKLG---------ASLPKVKNWCVAVH--ESKGKIIFLHKIQAGAA 772
Query: 828 DQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAK 870
D+S+GI+VA+ A P+SV+ A +LED + + + K
Sbjct: 773 DRSYGIYVAKLAGIPKSVIKRADNILQDLEDINGNTYVKNKKK 815
>gi|357637688|ref|ZP_09135563.1| DNA mismatch repair protein MutS [Streptococcus macacae NCTC 11558]
gi|357586142|gb|EHJ53345.1| DNA mismatch repair protein MutS [Streptococcus macacae NCTC 11558]
Length = 849
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 317/594 (53%), Gaps = 43/594 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y + Y+++ A +L++LE+ K+ SL+ L++ T TA MG RLL +W+ +PL++
Sbjct: 244 YEIKDYLQMTYATKSSLDLLENARSGKKHGSLYWLLDETKTA-MGTRLLRVWIDRPLVNR 302
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+ I R +IVQ F++ R DL LK + DIERL + +A + +++L + ++
Sbjct: 303 DLIINRQNIVQVFLEHFFERSDLSDSLKGVYDIERLASRVSFGKANPKDLLQLSHTLAQV 362
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD-QLENGE-YMI 462
P I++ L+ ++ + + ++ +DPL L +++ T++D D Q+ E +I
Sbjct: 363 PAIKAILESFDSPYLKALVDQ-IDPLPELE---------SIIRTAIDPDAQITVTEGNII 412
Query: 463 SSSYDTGLSALKN---EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITK 519
S +D L + E S I + K+ AS ++ LK+D + G+ F +T
Sbjct: 413 RSGFDETLDKYRKVMREGASWIADIEAKEKE-ASGIN-----TLKIDYNKKDGYYFHVTN 466
Query: 520 KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
+ F T K+ +F +L K+ + + EE N + + RV +
Sbjct: 467 SNLSLV----PDYFFRKATLKNSERFGTAELAKIEGEMLEAREESANLEYMIFMRVRKQV 522
Query: 580 VTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ 639
+ + LA L+ +DVL S A +A + Y +P N D +I +E RH VE
Sbjct: 523 ELYIGRLQQLAKHLATVDVLQSLAVVAEN--NHYIKPVFN--DQEEIRIENGRHAVVEKV 578
Query: 640 DWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
+ +IPN K+ Q+ITGPNM GKST++RQ+ + ++MAQ+GSFV D AS+ +
Sbjct: 579 MGIQEYIPNSI-YFDSKTSIQLITGPNMSGKSTYMRQLALAVIMAQIGSFVSADLASLPI 637
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF R+GA D + G STFM EM+E +K A+ +SLI+ DELGRGT+TYDG LA
Sbjct: 638 FDAIFTRIGAADDLISGQSTFMVEMMEANQAIKKASRQSLILFDELGRGTATYDGMALAQ 697
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
AI EH+ + I A T+FATH+HELT L + ++ + N HV+ ++T
Sbjct: 698 AIIEHIHDRIGAKTMFATHYHELTDL---------STKLTNLVNVHVATL--EKDGEVTF 746
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIE 872
L+K+ G D+S+GIHVA+ A P+ +++ A +LE + + + AK E
Sbjct: 747 LHKITDGPADKSYGIHVAKIAGLPDELLSHADHILFDLESSSQAVSVQTKAKAE 800
>gi|423073923|ref|ZP_17062658.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense DP7]
gi|361855336|gb|EHL07320.1| DNA mismatch repair protein MutS [Desulfitobacterium hafniense DP7]
Length = 846
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 225/711 (31%), Positives = 352/711 (49%), Gaps = 67/711 (9%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
GL +VD++ G + + L + E LLP E +K+ +
Sbjct: 129 GLAFVDVST---GEFTVFQTESLDILTTELSRIRPSELLLPAELLKAKHWRP-------- 177
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDES 275
LT+R+K ++ L+ R+L F A A L Y +L
Sbjct: 178 -YYLTQREKKTYQ--------HTLLEERFTEQRELFQEFPTAMKAANGLWQY--ILETSP 226
Query: 276 NYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRL 332
+I K Y + +M LD R L + ES K +L +++ T TA G RL
Sbjct: 227 GIDPSHILKVNAYRPEHWMLLDPWTRRNLELTESIRGQGKKGTLLSVLDFTKTA-FGGRL 285
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQ 392
L W++QPLL EI RLD V+A V+D+ LR DL Q ++ D+ERLM + A +
Sbjct: 286 LRRWIEQPLLLKGEIEKRLDYVEALVEDSFLRGDLIQLFGKVYDLERLMGKVSYGTANAR 345
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDL 452
++ L Q+ LP +R+ L EG+ L + ++ LE L + A +E +++
Sbjct: 346 DLLSLAQTLGVLPQLRALLA--EGKSEPL--QAFIPALEGL------DPLAATLEQAINP 395
Query: 453 D---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
+ L++G ++ + Y + L++ + + L + + D ++LK+
Sbjct: 396 EAPISLKDGN-LLKAGYSVEIDELRSISSGGKAWVAKLE---SMEKDRTGIRSLKVGYNK 451
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
FG+ +T I ++I +T + +F +LK+ + E+ +
Sbjct: 452 VFGYYIEVTHANSHLI----PAEYIRKQTLANAERFITPELKEYEQKILGAEEKVTQLEY 507
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
+L + +T + A L+E+DV S A+ ++ Y+RP + + G I+E
Sbjct: 508 QLFLELRETVRGQAAKILEAAHALAEIDVYTSLAE--AAVRHHYSRP-VMKGEGGLTIIE 564
Query: 630 GSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
G RHP VE+ QD +F+PND L K +ITGPNM GKST++RQV + +LMAQ+GS
Sbjct: 565 G-RHPVVESMLQD-TSFVPNDTILTEDKH-LALITGPNMAGKSTYMRQVALIVLMAQIGS 621
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP +A+I + D IF RVGA D G STFM EM E A IL+ T +SLII+DE+GRG
Sbjct: 622 FVPAQQATIPIADHIFTRVGASDDLASGQSTFMVEMYEVAHILRHVTPQSLIILDEVGRG 681
Query: 748 TSTYDGFGLAWAICEHLV-EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
T+TYDG +AWA+ E+L +E + TLFATH+HELT L ++ G+ N HV
Sbjct: 682 TATYDGLSIAWAVAEYLAGQENKPKTLFATHYHELTDLEETHS---------GIFNLHVG 732
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ ++ L+K+ PG D+S+GI VA+ A P +++ A+ ELE
Sbjct: 733 --VREHGEEIVFLHKIIPGRADRSYGIQVAKLAGLPANLLHRAKIILHELE 781
>gi|428201805|ref|YP_007080394.1| DNA mismatch repair protein MutS [Pleurocapsa sp. PCC 7327]
gi|427979237|gb|AFY76837.1| DNA mismatch repair protein MutS [Pleurocapsa sp. PCC 7327]
Length = 892
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 236/751 (31%), Positives = 360/751 (47%), Gaps = 100/751 (13%)
Query: 156 GLGYVDLTKRVLGLAEFL--DDSHFTNVESALVALGCKECLLPTEAV---------KSSE 204
GL Y D++ EF S T + S L+ L E L+PT A + S+
Sbjct: 170 GLAYADIST-----GEFFTTQSSSLTALNSELLRLQPSEILVPTNAPDLKTILRPGEKSD 224
Query: 205 CKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVS-GFEIAPGAL-- 261
C L D L C + R +T F + L R +R L G E P A+
Sbjct: 225 C--LADCLPEC-FCYSLRSQTPFTLAEAKSRLIETFR-----IRSLEGLGCEHLPLAIRA 276
Query: 262 -GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLM 320
G LL Y E + +R YS+ Y+ LD R L + ++ D + + SL +
Sbjct: 277 AGGLLEYIEDTQKANQVPLQPLRTYSIADYLILDYQTRRNLEITQTVRDNSFHGSLLWAL 336
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERL 380
+RTCTA MG R L WL QPLLD I AR D +Q V++T+LRQDLRQ L+ I D+ER+
Sbjct: 337 DRTCTA-MGGRALRRWLLQPLLDPKGIRARQDTIQELVENTSLRQDLRQLLRNIYDLERI 395
Query: 381 MHNLEKRRAGLQQIVKLYQSSIRL------------PYIRSALQQYEGQFSSLIKERYLD 428
+ A + ++ L S +RL PY++ ALQ+ + L ++
Sbjct: 396 TGRVGSGTANARDLLALADSLVRLNDLAELASYSTSPYLK-ALQRVPPKLEQLGQKVIAH 454
Query: 429 PLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYD--TGLSALKNEQESLERQIHS 486
+ES HL + ++ V+ QL+ + Y+ T L E+ E+Q
Sbjct: 455 LVES--PPLHLKEG-GVIRDGVN-PQLDEMRRLAKEDYEWITNL-------EATEKQRTG 503
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
++ LK+ FG+ + + + +K +I +T + ++
Sbjct: 504 IYN-------------LKVGYNKTFGYYISLPRSKA----EKAPDDYIRKQTLTNEERYI 546
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
+LK+ + ++ + E+ + ++ +S+A ++ +DVL A++A
Sbjct: 547 TPELKERETRILTAKDDLNKLEYEIFADLRSQVAQKAQEIRSIAKAVAAIDVLAGLAEVA 606
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIR------------ 653
Y RP+I +I L+G RHP VE V F+PN ++ R
Sbjct: 607 VY--QGYCRPEIEQGRQIEI-LDG-RHPVVEQSLPVGLFVPNSTQMGRRDKIKNGEDSAL 662
Query: 654 GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 713
I+TGPN GKS ++RQVG+ LMAQ+GSFVP A + + D IF RVGA D
Sbjct: 663 SHPDLIILTGPNASGKSCYLRQVGLIQLMAQMGSFVPAKSAKLGICDRIFTRVGAVDDLA 722
Query: 714 RGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTL 773
G STFM EM ETA+IL AT +SL+++DE+GRGT+T+DG +AWA+ E+L EI+A T+
Sbjct: 723 TGQSTFMVEMNETANILNHATPKSLVLLDEIGRGTATFDGLSIAWAVAEYLATEIQAKTI 782
Query: 774 FATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGI 833
FATH+HEL LA +N VANY V+ + ++ L++V PG D+S+GI
Sbjct: 783 FATHYHELNELASLISN---------VANYQVT--VKEMPNEIIFLHQVRPGGADKSYGI 831
Query: 834 HVAEFANFPESVVTLAREKAAELEDFTPSAV 864
A P SV+ A++ ++E + A+
Sbjct: 832 EAGRLAGLPASVIDRAKQVMRQIEKHSKIAL 862
>gi|167765541|ref|ZP_02437605.1| hypothetical protein CLOSS21_00035 [Clostridium sp. SS2/1]
gi|167712726|gb|EDS23305.1| DNA mismatch repair protein MutS [Clostridium sp. SS2/1]
Length = 875
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 218/680 (32%), Positives = 342/680 (50%), Gaps = 56/680 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL Y S +I Y +M +DS++ R L + E+ D K SL +
Sbjct: 239 ATGALLGYLHETQKSSLDHLMHIEAYETSEFMIIDSSSRRNLELCETLRDKQKKGSLLWV 298
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L ++QPL+D +I R D V D T +R++LR++L I D+ER
Sbjct: 299 LDKTKTA-MGARMLRNMVEQPLVDKKKIEERYDAVTTLTDQTIVREELREYLNPIYDLER 357
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
LM + + A + ++ S LP I++ L++ + S ++E LDPLE + +
Sbjct: 358 LMTKVSYKTANPRDMIAFKTSLELLPAIKTVLEECKDPLLSGLRED-LDPLEDIHN---- 412
Query: 440 NKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L+E S+ L E G +I + + LK + ++ + L ++
Sbjct: 413 -----LLEDSIIEEPPLAIKEGG--IIKEGFKEDIDKLKRAKTEGKQWLMELEEREREKT 465
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K LK+ FG+ +T + + +I +T + ++T +L +L D
Sbjct: 466 GI---KNLKIKFNKVFGYYLDVTNS----YKDLVPDHYIRKQTLANSERYTTEELNQLAD 518
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
+ + E + +T E A +++++D L S A +A + R
Sbjct: 519 TILGSEDRLYALEYETYVMIRETLAGEMERISRTANVIAQIDALASLAYVAER--NHFVR 576
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
P +N G I ++ RHP VE Q N FI ND L K+ IITGPNM GKST++
Sbjct: 577 PKLNVR--GTIDIKDGRHPVVE-QVIPNDMFISNDTYLDNKKNRVAIITGPNMAGKSTYM 633
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQV + +LMAQ+GSFVP +A+I + D IF RVGA D G STFM EM E A+IL+ A
Sbjct: 634 RQVALIVLMAQIGSFVPAAKANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNA 693
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANE 791
T SL+I+DE+GRGTST+DG +AWA+ E++ + A TLFATH+HELT L
Sbjct: 694 TKNSLLILDEIGRGTSTFDGLSIAWAVVEYISNSKLLGAKTLFATHYHELTELE------ 747
Query: 792 FNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
++ V NY ++ + + L K+ G D+S+G+ VA+ A P++V+ A+E
Sbjct: 748 ---GKIDSVHNYCIA--VKEQGDDIVFLRKIVKGGADKSYGVQVAKLAGVPDAVINRAKE 802
Query: 852 KAAELEDFTPSAVISDDAKIEVGSKRK----RISDPNDMSRGAARAHQFLKEFSDMPLET 907
A ELE+ ++ D + G ++ R SD M H F+ E + L
Sbjct: 803 IARELEEHDLTSGAKD--IMPYGEAQQLSFFRESDEPTME------HPFMAELREKDLSD 854
Query: 908 MDLKEALERVKRMKDDLEKD 927
M EAL + +++ L+ +
Sbjct: 855 MTPLEALNYLYVLQEKLKNE 874
>gi|228928819|ref|ZP_04091851.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830626|gb|EEM76231.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 886
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNVYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|94995318|ref|YP_603416.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS10750]
gi|166232145|sp|Q1J489.1|MUTS_STRPF RecName: Full=DNA mismatch repair protein MutS
gi|94548826|gb|ABF38872.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10750]
Length = 851
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 218/721 (30%), Positives = 352/721 (48%), Gaps = 83/721 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ + Y+D L + D D L + L+ T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILESFNSA--------YVDKL--VNDIDSLPELEYLIRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLV----PDHFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA +L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 E 857
E
Sbjct: 785 E 785
>gi|196034166|ref|ZP_03101576.1| DNA mismatch repair protein MutS [Bacillus cereus W]
gi|195993240|gb|EDX57198.1| DNA mismatch repair protein MutS [Bacillus cereus W]
Length = 892
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 215 VSQAKLIKAVGCLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 274
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 275 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 333
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 334 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 392
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 393 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 442
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 443 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERK--------QTLANAE 491
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 492 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 551
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 552 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVF-LIT 606
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 607 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 666
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 667 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 726
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E + Q+ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 727 VL------EDSLDQL---KNVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 775
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 776 DSLIARAKEVLAQLE 790
>gi|449119093|ref|ZP_21755492.1| DNA mismatch repair protein mutS [Treponema denticola H1-T]
gi|449121484|ref|ZP_21757831.1| DNA mismatch repair protein mutS [Treponema denticola MYR-T]
gi|448950083|gb|EMB30906.1| DNA mismatch repair protein mutS [Treponema denticola MYR-T]
gi|448951019|gb|EMB31835.1| DNA mismatch repair protein mutS [Treponema denticola H1-T]
Length = 884
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 320/647 (49%), Gaps = 60/647 (9%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E+ P G LL Y E +S I+ Y+ ++ LD + + L +L + D + ++
Sbjct: 235 EVPPA--GLLLQYLEEISGRDISHISGIKIYAESDFVSLDDSTRKNLELLTNLRDNSPSY 292
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SLF +N T TA MG RLL + PL EI+ RLD V + D +R+ L I
Sbjct: 293 SLFESINYTKTA-MGTRLLRRRISYPLRSKKEIDKRLDKVNSLFKDGKASAIIRETLSSI 351
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
DIERL + ++ + ++ L QS + S ++ SLI+E+ L+ L+ L+
Sbjct: 352 LDIERLSGRIAMQKTHGKDLLALKQS------LNSVIR-----MGSLIEEKKLNFLQ-LS 399
Query: 435 DDDH--LNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHS 486
D++ L + L+E S+D D L +G+ + S DT + +N E LE+ +
Sbjct: 400 DEEKKLLTEIRDLLENSIDDDCTIALNDGKLIKKGFSKKVDTIKNIKENAHEILEKYLDD 459
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
K+T + LK+ G+ ++ + FI + + +FT
Sbjct: 460 ERKKTGIN-------NLKIKYNRMMGYFLEVSLGNISAV----PDYFIRQRSLSNADRFT 508
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK++ D E +KE+ + V + + LA ++ELDV SFA A
Sbjct: 509 TESLKQIEDNINNSEERLIEAEKEVFDEVCTEIGSHHCFLQKLAEEVAELDVNQSFAQAA 568
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSW-------- 657
+TRP++ D G + + G RHP VE +F+PN KL+ G++
Sbjct: 569 --VLHAWTRPELCG-DSGILNIIGGRHPVVENHLRAGDFVPNSIKLLSGENSNSEDETIP 625
Query: 658 -FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKSTF+RQ + L+AQ+GSFVP ++A +S D IF RVGA D RG
Sbjct: 626 SFAVITGPNMAGKSTFLRQTALICLLAQIGSFVPAEKAVLSPVDKIFCRVGATDNLARGE 685
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STF+ EM+ETA IL AT SL+I+DE+GRGTS DG +A A+ EHL+ I+A TLFAT
Sbjct: 686 STFLVEMIETAYILNSATRNSLVIMDEVGRGTSMEDGLAIAQAVSEHLLNTIKAKTLFAT 745
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L HE ++ + K+ L KV PGA S+GIHVA
Sbjct: 746 HYHELTRLEHEKI-------------INLKLDVLEAEGKIVFLKKVIPGAAGNSYGIHVA 792
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
A P+SV+T A F I + + GS+ K S P
Sbjct: 793 GLAGIPQSVLTRAENLLYMRSQFQKERTIQEASPSAQGSEEKTPSSP 839
>gi|387926949|ref|ZP_10129628.1| DNA mismatch repair protein MutS [Bacillus methanolicus PB1]
gi|387589093|gb|EIJ81413.1| DNA mismatch repair protein MutS [Bacillus methanolicus PB1]
Length = 870
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 313/594 (52%), Gaps = 34/594 (5%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ Y + YM++D + R L + E+ K SL L++ T TA MG RLL W+ +PL
Sbjct: 245 VSAYQVHQYMKIDYFSKRNLELTETIRSKGKKGSLLWLLDETKTA-MGGRLLKQWIDRPL 303
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ + I RL V+ ++ RQDLR+ LK + D+ERL+ + + +++L +S
Sbjct: 304 INQDSIEKRLSFVETLMNHYFERQDLREKLKEVYDLERLVGRVAFGNVNARDLIQLKRSL 363
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
+++P+++ + + + + R LDP E +TD L + ALVE + G +
Sbjct: 364 LQVPHLKEIVTGLQNKEAKNFAGR-LDPCEEVTD--LLER--ALVENPPV--SIREGNF- 415
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y+ L ++ + + I L Q + K+LK+ FG+ +TK
Sbjct: 416 IQDGYNEELDKYRDAMRNGKTWIAMLESQEREKTGI---KSLKIGYNRVFGYYIEVTKAN 472
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
++ Q+ +T + +F +LK+ + E+ + +L + +
Sbjct: 473 LHLLKD---GQYERKQTLANAERFITPELKEKEALILEAEEKSVELEYQLFVELREYVKV 529
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQD 640
+ ++LA +SELDVL FA ++ +TRP + D I+++ RHP VE +
Sbjct: 530 YIPRLQALAKTVSELDVLQCFATVSEE--RHFTRPSFS--DERRIVIKEGRHPVVEKVMN 585
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
++PNDC + + +ITGPNM GKST++RQ+ + ++AQ+G FVP A + + D
Sbjct: 586 AQEYVPNDC-YMDAEREILLITGPNMSGKSTYMRQIALTAILAQIGCFVPASEAVLPIFD 644
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
+F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTSTYDG LA AI
Sbjct: 645 QVFTRIGAADDLISGQSTFMVEMLEAKNAITNATQDSLILFDEIGRGTSTYDGMALAQAI 704
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E++ I A TLF+TH+HELT L E + V N HVSA + K+ L+
Sbjct: 705 IEYIHNRIGAKTLFSTHYHELTVLEEE---------LPKVKNVHVSAV--EQNGKVVFLH 753
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLARE--KAAELEDFTPSAVISDDAKIE 872
K++ GA D+S+GIHVA+ A PE ++ A E + E ++ + +A +DD + E
Sbjct: 754 KIKEGAADKSYGIHVAQLAELPEELINRANEILQTFEKKEDSETAAKNDDRQTE 807
>gi|172087864|emb|CAQ35088.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
Length = 872
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 308/591 (52%), Gaps = 63/591 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL+
Sbjct: 241 QYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIS 299
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 300 KEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 359
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLENGE 459
+P I++ L +L++ L+PL+ L D ++E S+ + + G
Sbjct: 360 IPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDGGL 408
Query: 460 YMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF 511
+ + + D L A KN E ++ ERQ + K+LK+ F
Sbjct: 409 FKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNKVF 455
Query: 512 GHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNC 567
G+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 456 GYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAIEL 510
Query: 568 QKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII 627
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +++
Sbjct: 511 EYQLFVQLREEVKKYTERLQHQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLELV 568
Query: 628 LEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
SRHP VE D+ +++PNDC+L +++ +ITGPNM GKST++RQV + +MAQ+G
Sbjct: 569 --ESRHPVVERVMDYNDYVPNDCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMG 625
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GR
Sbjct: 626 AYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGR 685
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N HV+
Sbjct: 686 GTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVHVA 736
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 737 A--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|449104170|ref|ZP_21740911.1| DNA mismatch repair protein mutS [Treponema denticola AL-2]
gi|448963688|gb|EMB44364.1| DNA mismatch repair protein mutS [Treponema denticola AL-2]
Length = 883
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 319/647 (49%), Gaps = 60/647 (9%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E+ P G LL Y E +S I+ Y+ ++ LD + + L +L + D + ++
Sbjct: 234 EVPPA--GLLLQYLEEISGRDISHISGIKIYAESDFISLDDSTRKNLELLTNLRDNSPSY 291
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SLF +N T TA MG RLL + PL EI+ RLD V + D +R+ L I
Sbjct: 292 SLFESVNYTKTA-MGTRLLRRRISYPLRSKKEIDKRLDKVNSLFKDGKASAIIRETLSSI 350
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
DIERL + ++ + ++ L QS + S ++ SLI+E+ L+ L+ L+
Sbjct: 351 LDIERLSGRIAMQKTHGKDLLALKQS------LNSVIR-----MGSLIEEKKLNFLQ-LS 398
Query: 435 DDDH--LNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHS 486
D++ L + L+E S+D D L +G+ + S DT + +N E LE+ +
Sbjct: 399 DEEKKLLTEIRDLLENSIDDDCSIALNDGKLIKKGFSKKVDTIKNIKENAHEILEKYLDD 458
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
K+T + LK+ G+ ++ + FI + + +FT
Sbjct: 459 ERKKTGIN-------NLKIKYNRMMGYFLEVSLGNISAV----PDYFIRQRSLSNADRFT 507
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK++ D E +KE+ + V + + LA ++ELDV SFA A
Sbjct: 508 TESLKQIEDNINNSEERLIEAEKEVFDEVCTEIGSHHCFLQKLAEEVAELDVNQSFAQAA 567
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSW-------- 657
+TRP++ D G + + G RHP VE +F+PN KL+ G++
Sbjct: 568 --VLHAWTRPELCG-DSGILNITGGRHPVVENHLRAGDFVPNSIKLLSGENTNPEDETIP 624
Query: 658 -FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKSTF+RQ + L+AQ+GSFVP ++A +S D IF RVGA D RG
Sbjct: 625 SFAVITGPNMAGKSTFLRQTALICLLAQIGSFVPAEKAVLSPVDKIFCRVGATDNLARGE 684
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STF+ EM+ETA IL AT SL+I+DE+GRGTS DG +A A+ EHL+ I+A TLFAT
Sbjct: 685 STFLVEMIETAYILNSATRNSLVIMDEVGRGTSMEDGLAIAQAVSEHLLNTIKAKTLFAT 744
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L HE ++ + K+ L KV PGA S+GIHVA
Sbjct: 745 HYHELTRLEHEKI-------------INLKLDVLEAEGKIVFLKKVVPGAAGNSYGIHVA 791
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
A P+SV+T A F I + GS+ K S P
Sbjct: 792 GLAGIPQSVLTRAENLLYMRSQFQKERTIQEARPSAQGSEEKTPSSP 838
>gi|421892385|ref|ZP_16323055.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NS88.2]
gi|379981856|emb|CCG26777.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NS88.2]
Length = 851
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 230/784 (29%), Positives = 380/784 (48%), Gaps = 98/784 (12%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F+S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FNSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTTSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVIAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 EDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALER 916
E + S I IS P+ + +A L F D +T ++++ALE
Sbjct: 785 ETQSRSTEI--------------ISVPSQVESSSAVRQGQLSLFGDEE-KTHEIRQALEA 829
Query: 917 VKRM 920
+ M
Sbjct: 830 IDVM 833
>gi|281422309|ref|ZP_06253308.1| DNA mismatch repair protein MutS [Prevotella copri DSM 18205]
gi|281403630|gb|EFB34310.1| DNA mismatch repair protein MutS [Prevotella copri DSM 18205]
Length = 887
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 308/604 (50%), Gaps = 39/604 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA++ Y E+ + + D ++R+D +R+L ++ + SL +
Sbjct: 249 ASGAIMQYLEITQHTQINHITALSRIEEDKFVRMDRFTIRSLELVAPMQEDGS--SLLNV 306
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT TA MG R+L WL PL DV IN RLDIV+ F + RQ L L RISD+ER
Sbjct: 307 IDRTVTA-MGGRMLRRWLVFPLKDVKPINERLDIVEYFFKEPEFRQLLDDQLHRISDLER 365
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
++ + R +++V+L + + I+ A Q + + E+ L+ E+L D
Sbjct: 366 IISKVAVGRVSPREVVQLKNALEAIKPIKVACQHATNEALKRVGEQ-LNVCETLKDR--- 421
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS-LHKQTASDLDLP 498
IA E D QL N +I+ ++ L L+ ++ R L K +++
Sbjct: 422 ---IAR-EIQPDPPQLVNKGDVIADGFNAELDDLR----AISRHGKDYLLKIQEREIEKT 473
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
+LK+ FG+ + + K+ ++I +T ++ +LK+ ++
Sbjct: 474 GISSLKVGYNNVFGYYLEVRNT----FKDKVPEEWIRKQTLAQAERYITQELKEYEEKIL 529
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
E+ + +L N +I + + A +++ +D LLSFA +S Y RP +
Sbjct: 530 GADEKILVLEAQLFNELIAAMQEYIPQIQINANLIARMDCLLSFA--KTSDENRYVRPIV 587
Query: 619 NPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
+ +V DI + RHP +E Q + ++PND L K +ITGPNM GKS +RQ
Sbjct: 588 DDSEVLDI--KQGRHPVIETQLPLGERYVPNDVLLDTEKQQIMMITGPNMAGKSALLRQT 645
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ +L+AQVG FVP + A + + D IF RVGA D G STFM EM E A+IL + R
Sbjct: 646 ALIVLLAQVGCFVPAESARVGLVDKIFTRVGASDNISLGESTFMVEMTEAANILNNVSPR 705
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNT 794
SL++ DELGRGTSTYDG +AWAI E+L E + +A TLFATH+HEL +
Sbjct: 706 SLVLFDELGRGTSTYDGISIAWAIVEYLHEHKKAQARTLFATHYHELNEME--------- 756
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
K + N++VS + K+ L K+EPG + SFGIHVAE A P S+V A
Sbjct: 757 KNFPRIKNFNVS--VREVDGKVIFLRKLEPGGSEHSFGIHVAEIAGMPRSIVNRANVILK 814
Query: 855 ELED 858
+LED
Sbjct: 815 QLED 818
>gi|404371184|ref|ZP_10976492.1| DNA mismatch repair protein mutS [Clostridium sp. 7_2_43FAA]
gi|226912693|gb|EEH97894.1| DNA mismatch repair protein mutS [Clostridium sp. 7_2_43FAA]
Length = 933
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 197/604 (32%), Positives = 318/604 (52%), Gaps = 35/604 (5%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y + +YM +D + R L + E+ + +K SL ++++T T+ MG R + W+++PL+
Sbjct: 252 YDIINYMTIDGNSRRNLELTENLKEKSKKGSLIWVLDKTATS-MGGRAIRKWIEEPLIIK 310
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
+EI RL+ V+ ++ +DLR LK I DIER++ + + A + ++ L S +L
Sbjct: 311 SEIEKRLEGVEELYNNAYFNEDLRSLLKEIYDIERIVGKISNKNANAKDLISLKCSLEKL 370
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P I+S L + S+++KE Y D L+ LTD L L + S+ L + +I
Sbjct: 371 PGIKSHLSEAS---SNILKEWYKD-LDELTDIKELLSNSILDDPSIALKEGN----IIKD 422
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPK 524
Y+ + +L+ + + I +L + + D ++LK+ FG+ I+K
Sbjct: 423 GYNEEVDSLRTAKLHGKEWIAALENR---ERDFTGIRSLKVGYNKVFGYYIEISKANYSS 479
Query: 525 IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSE 584
I + ++I +T + +F +LK++ D+ E+ + + +L + +
Sbjct: 480 IPE---GRYIRKQTLANAERFITQELKEMEDKILGAEEKLVSLEYDLFIEIREAIEKEIA 536
Query: 585 IFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVN 643
K A ++ LD L + + +A Y +P IN G I + RHP VE
Sbjct: 537 RLKQSARIIGNLDALSTLSLIA--VENDYVKPSINED--GIIEINEGRHPVVEKVIGKGE 592
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
F+ ND L + +ITGPNM GKST++RQV + LMAQ+GSFVP A+IS+ D IF
Sbjct: 593 FVSNDTTLNSNDNRLLLITGPNMAGKSTYMRQVALITLMAQIGSFVPAKSANISICDKIF 652
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
R+GA D G STFM EM E ++ILK AT +SL+++DE+GRGTSTYDG +AW++ E+
Sbjct: 653 TRIGASDDLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEY 712
Query: 764 LVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS-AHIDSTSRKLTMLY 820
+ + ++ TLFATH+HELT L + GV NY V+ + ID + L
Sbjct: 713 ISKNNNLKCKTLFATHYHELTKLEG---------VIEGVKNYSVAVSEIDDN---IIFLR 760
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRI 880
K+ G DQS+GI VA+ A P V+ A+E + LE+ + S + + EV + +
Sbjct: 761 KIVEGGADQSYGIEVAKLAGLPTQVIDRAKEILSSLENTSGSNSLDVTSIKEVATDKFEK 820
Query: 881 SDPN 884
D N
Sbjct: 821 DDVN 824
>gi|21911342|ref|NP_665610.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS315]
gi|28896716|ref|NP_803066.1| DNA mismatch repair protein MutS [Streptococcus pyogenes SSI-1]
gi|342165160|sp|P0DC60.1|MUTS_STRP3 RecName: Full=DNA mismatch repair protein MutS
gi|342165161|sp|P0DC61.1|MUTS_STRPQ RecName: Full=DNA mismatch repair protein MutS
gi|21905557|gb|AAM80413.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS315]
gi|28811970|dbj|BAC64899.1| putative DNA mismatch repair protein [Streptococcus pyogenes SSI-1]
Length = 851
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 230/784 (29%), Positives = 380/784 (48%), Gaps = 98/784 (12%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FDSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA +L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 EDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALER 916
E + S I IS P+ + +A L F D +T ++++ALE
Sbjct: 785 ETQSRSTEI--------------ISVPSQVESSSAVRQGQLSLFGDEE-KTHEIRQALEA 829
Query: 917 VKRM 920
+ M
Sbjct: 830 IDVM 833
>gi|117924747|ref|YP_865364.1| DNA mismatch repair protein MutS [Magnetococcus marinus MC-1]
gi|189083157|sp|A0L7L5.1|MUTS_MAGSM RecName: Full=DNA mismatch repair protein MutS
gi|117608503|gb|ABK43958.1| DNA mismatch repair protein MutS [Magnetococcus marinus MC-1]
Length = 868
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 226/693 (32%), Positives = 335/693 (48%), Gaps = 85/693 (12%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
G GALL Y E+ + + M LD R L + + D ++ SL G
Sbjct: 234 GVCGALLHYCRETQKEALSHITGLSRLHQQEGMVLDETCRRNLELNYNLKDGSRKSSLLG 293
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
+M+R C MG RLL W+ +PL ++ I R + V ++ QDLR+ L+ + D+E
Sbjct: 294 VMDR-CITPMGSRLLAQWINRPLQSLDAIATRQESVSWLRENLVAYQDLRERLRMVHDLE 352
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
R + + RRA + + L Q+ LP + + L +G SL L L DH
Sbjct: 353 RFLSRIALRRASPRDLGGLRQTLQCLPQLYAILTPADGH--SLAVPSLLRILA-----DH 405
Query: 439 LNKFIALVETSVDLDQ---------LENGEYMISSSYDTGLSALKNEQESLERQIHSLHK 489
N AL + L+Q L+ GE I +D L L++ + + L
Sbjct: 406 FNGHEALTK---QLEQQLADELPLNLKEGE-TIRLGFDQTLDTLRSLSRDGKSYLTKLEV 461
Query: 490 QTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTK 549
+ +P +LK+ FG+ +TK K+ + +I +T +GV++ +
Sbjct: 462 EEREKTGIP---SLKIKYHRSFGYSMEVTKTHLDKVPPR----YIQRQTMTNGVRYVTEE 514
Query: 550 LKKLGDQY----QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
LK+ +Q +++LE + + L +V + A T +++AT LDVL +FA +
Sbjct: 515 LKEYEEQLLTAEERMLEREQLLFEALAEQVARQAETLQASARAIAT----LDVLANFAHI 570
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPN 665
A Y RP ++ V I + RHP VE F+ ND +L + +ITGPN
Sbjct: 571 AEE--RNYCRPLLHEGAV--IEINQGRHPVVEQFSDTPFVANDIRL-DNRQRTGLITGPN 625
Query: 666 MGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLE 725
M GKST +RQV + +L+A G+ VP A I D IF RVGA D G STFM EM E
Sbjct: 626 MAGKSTLMRQVALIVLLAHTGACVPAGSAKIGRVDRIFTRVGASDDLAGGRSTFMVEMTE 685
Query: 726 TASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA 785
TA IL A++RSL+I+DE+GRGTSTYDG +AWA+ EH+ + +A TLFATH+HELT L
Sbjct: 686 TAHILHHASERSLVILDEIGRGTSTYDGLSIAWAVAEHIHTQCQARTLFATHYHELTQL- 744
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
Q+ GV N ++ + ++ L+ + GA D+S+GIHVA+ A P +V
Sbjct: 745 --------ESQLDGVFN--LTVEVKEWKDQILFLHTIVRGAADRSYGIHVAQLAGLPRAV 794
Query: 846 VTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQF--LKEFSDM 903
ARE A+LE+ + P+ M +G A A Q L F D
Sbjct: 795 TRRAREVLADLEEHA-------------------VHHPDSMGQGHAPASQPYQLTLFEDA 835
Query: 904 P-------LETMD-----LKEALERVKRMKDDL 924
P L+ +D KEALE + R+K+ L
Sbjct: 836 PPSPALLELKRVDPDELTPKEALEALYRLKELL 868
>gi|384550052|ref|YP_005739304.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302332901|gb|ADL23094.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 872
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 311/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALTSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|160939142|ref|ZP_02086493.1| hypothetical protein CLOBOL_04036 [Clostridium bolteae ATCC
BAA-613]
gi|158438105|gb|EDP15865.1| hypothetical protein CLOBOL_04036 [Clostridium bolteae ATCC
BAA-613]
Length = 881
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 212/664 (31%), Positives = 341/664 (51%), Gaps = 61/664 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I YS YM +D++ R L ++E+ + K +L ++++T TA MG RLL ++QPL
Sbjct: 252 ITPYSTGQYMVIDTSTRRNLELVETMREKQKRGTLLWVLDKTKTA-MGARLLRACIEQPL 310
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +EI R + V+ + R+++ ++L I D+ERL+ + + A + ++ S
Sbjct: 311 IHRDEIIKRQNAVEELNMNYISREEICEYLNPIYDLERLIGRISYKTANPRDLIAFRSSL 370
Query: 402 IRLPYIRSALQQYEGQFSS-LIKE--RYLDPLE---SLTDDDHLNKFIALVETSVDLDQL 455
LPYI+ L G+F+S L+ E R LDPL+ L D A+VE +
Sbjct: 371 EMLPYIKRIL----GEFNSELLAELGRELDPLQDIFQLIGD-------AIVEEP-PITVR 418
Query: 456 ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVF 515
E G +I Y+ L++ + + + L + + K LK+ FG+ F
Sbjct: 419 EGG--IIKDGYNQEADKLRHAKTEGKNWLAELEAKEKEKTGI---KTLKVKFNKVFGYYF 473
Query: 516 RITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV--- 572
+T + ++ +I +T + +FT +LK+L D E+ + + +L
Sbjct: 474 EVTNS----FKDQVPDYYIRKQTLTNAERFTTDELKQLEDIIMGAEEKLVSLEYDLFCEV 529
Query: 573 -NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGS 631
+++ + + KS+A +DV S + +A+ Y +P IN D G I ++
Sbjct: 530 RDKIGAEVIRIQKTAKSIAG----IDVFCSLSVVATR--RNYVKPSIN--DKGVIQIKNG 581
Query: 632 RHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
RHP VE + F+ ND L GK+ +ITGPNM GKST++RQV + +LMAQ+GSFVP
Sbjct: 582 RHPVVEQMMRDDMFVANDTFLDNGKNRLSVITGPNMAGKSTYMRQVALIVLMAQLGSFVP 641
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
A I + D IF RVGA D G STFM EM E A+IL+ AT SL+++DE+GRGTST
Sbjct: 642 AQEADIGICDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATRNSLLVLDEIGRGTST 701
Query: 751 YDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
+DG +AWA+ EH+ + A TLFATH+HELT L + GV NY ++
Sbjct: 702 FDGLSIAWAVIEHISNSKLLGAKTLFATHYHELTELEG---------TIAGVKNYCIA-- 750
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDD 868
+ + L K+ G D+S+GI VA+ A P+SV+ A+E A EL D +A +
Sbjct: 751 VKEQGDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSVIARAKEIAEELSDADITARAKEI 810
Query: 869 AKIEVG-SKRKRISDPNDMSR------GAARAHQFLKEFSDMPLETMDLKEALERVKRMK 921
A+I ++ K + P+++ + ++E + L TM +A+ + R++
Sbjct: 811 AEISSNITQHKAVPKPDEVDLQQLSFFDTVKDDDIIRELDSLELSTMTPLDAMNTLYRLQ 870
Query: 922 DDLE 925
L+
Sbjct: 871 TKLK 874
>gi|222151137|ref|YP_002560291.1| DNA mismatch repair protein MutS [Macrococcus caseolyticus
JCSC5402]
gi|254766632|sp|B9EBI4.1|MUTS_MACCJ RecName: Full=DNA mismatch repair protein MutS
gi|222120260|dbj|BAH17595.1| DNA mismatch repair protein MutS [Macrococcus caseolyticus
JCSC5402]
Length = 846
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 220/710 (30%), Positives = 351/710 (49%), Gaps = 62/710 (8%)
Query: 235 DLDRLVRGSVEPVRDLVSGFEI------APG-------ALGALLSYAELLS-------DE 274
DL+ ++ ++ + D++S FE+ A G A+ LLSY + DE
Sbjct: 172 DLNEVLINKIKMITDVISRFEVNDTFKQADGVDQSLQPAVNLLLSYIQYTQMRALAHIDE 231
Query: 275 SNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLH 334
+ Y Y YMRLD A R L + ES NK +L + N+ C MG RL+
Sbjct: 232 AVY-------YEPVHYMRLDMYAKRNLELTESIRHKNKKGTLLSIFNQ-CKTPMGNRLVK 283
Query: 335 MWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQI 394
W+++PLL+ EI R + V+ F D+ LR LR+ L + DIERL ++ + +
Sbjct: 284 EWIERPLLNRQEIEERHNGVELFNDNFILRHQLREALTHVYDIERLAGRVQFGNVSAKDL 343
Query: 395 VKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKF-IALVETSVDLD 453
V+L S +LP I+S L++++ +L L PL + + L++ ++ + + D
Sbjct: 344 VQLKYSLEQLPMIQSLLKEHDEVIRTLDNIDALQPLYDMLEASLLDEAPTSIKDGGIFKD 403
Query: 454 QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGH 513
N + + G L NE ++ ER+ + K+LK+ FG+
Sbjct: 404 GFNNDVDELRYASKNGKQWL-NELQAKERERTGV-------------KSLKIGYNKVFGY 449
Query: 514 VFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVN 573
I+K + + +T + +F +LK+ E+ N + EL
Sbjct: 450 YIEISKANLVNLDVD-AFGYTRKQTLSNAERFITEELKEKESLILGAEEKLMNLEYELFI 508
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRH 633
++ TF K A ++ LD L +F+++A+ Y +P I+ V +I E +RH
Sbjct: 509 QLRDFVKTFILNLKQQAKNIAVLDCLQNFSEVATK--HQYIKPIISGTKVLNI--EDARH 564
Query: 634 PCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
P VE + ++ NDCKL ++ +ITGPNM GKST++RQV + +MAQ+G+FVP
Sbjct: 565 PVVETVMERDQYVANDCKL-DDHTFIYLITGPNMSGKSTYMRQVALISIMAQMGAFVPAS 623
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
A + + D IF R+GA D + G STFM EMLE + L+ ATD SLII DE+GRGTSTYD
Sbjct: 624 YAEVPIFDQIFTRIGAADDLVSGQSTFMVEMLEAKNALQNATDNSLIIFDEIGRGTSTYD 683
Query: 753 GFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
G LA ++ E++ +I A TLF+TH+HEL L + + G+ N HV+A
Sbjct: 684 GLSLAQSMIEYVHNKIGAKTLFSTHYHELVDLE---------QTLDGLNNIHVAA--KEY 732
Query: 813 SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIE 872
+ +L L+KV PGA + S+GIHVA+ A P ++ + E E E + I+
Sbjct: 733 NGELIFLHKVMPGAVEHSYGIHVAKLAQLPAEIIERSSELLDEFEHNEKVRKGDSNKIIQ 792
Query: 873 VGSKRKRISDPNDMSRGAARAHQF-LKEFSDMPLETMDLKEALERVKRMK 921
I + N A H +++ D+ ++ + EAL +++ +K
Sbjct: 793 PSFNLFEIENENTNKYNANHEHDLIIQQIKDISIDELTPIEALLKLQEIK 842
>gi|337286407|ref|YP_004625880.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
gi|335359235|gb|AEH44916.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
Length = 857
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 233/760 (30%), Positives = 362/760 (47%), Gaps = 72/760 (9%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEF 172
+++ TPG L E+ L + +D +V+LFP G G+ ++DL+ + E
Sbjct: 104 VIRVVTPG-LNLDEETLTS----KDNRFLVSLFP-----GKAWGMAHLDLSTGDFKVTEI 153
Query: 173 LDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT------RCGVMLTERKKTE 226
+ N L L KE LLP S+ + +R+ + R + +R +
Sbjct: 154 HSEEEMLN---ELFRLEPKEILLPETLKDSALERKIRELIPHIFISYRVFINAKQRAEEL 210
Query: 227 FKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLS-----YAELLSDESNYGNYY 281
K R V DL +GF ++ + Y E +
Sbjct: 211 IKERYQVADL---------------TGFGLSQAPAALCAAATLLDYVIETQKEVSSHLGV 255
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ Y L ++ +D A R L +L + D + SL ++++T T MG RLL WL PL
Sbjct: 256 PKFYYLSQFLIIDEATKRNLEILRNNLDGSLKGSLLWVLDKTLTP-MGGRLLKEWLLYPL 314
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ I ARL+ V VD+ + R++LR+ L RI+D+ERL A + ++ L S
Sbjct: 315 RNLESIEARLEAVAYLVDEPSKRKNLRELLARIADVERLTGRAAMGVANPRDLLALKDSL 374
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
+P ++ L + IKE L P D + + ++ E G +
Sbjct: 375 KMVPQLKELLPEKISPLLDAIKENLLVP------GDLVQNLEKTIREEAPVNFKEGG--V 426
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I L L+ ++ + L + + +P LK+ FG+ ++K
Sbjct: 427 IKDGVHEELDELRRLKDDALSFLAELETRERARTGIP---NLKVGYNRVFGYYIEVSKSH 483
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
K+ +I +T G +F +LK+ + E K ++EL + +
Sbjct: 484 LSKV----PDNYIRKQTLVGGERFITPELKEFEAKVLSADERIKELEQELFLEIRKNVAE 539
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQD 640
++ K LA L+ LDVL S A++A + Y RP I + G I EG RHP VE A
Sbjct: 540 KAQELKKLARALATLDVLASLAEVAVT--NNYIRPKIIE-EPGIQIREG-RHPVVEKALP 595
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
+F+PN KL ++ +ITGPNM GKST +RQ + L+A VGSFVP + A+I + D
Sbjct: 596 SGSFVPNSVKLDLKENVVLVITGPNMAGKSTILRQTALITLLAHVGSFVPAEEATIGLCD 655
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
IF+R+GA D RG STFM EM E A+IL AT RSL+I+DE+GRGTSTYDG +AWA+
Sbjct: 656 RIFSRIGASDQLSRGRSTFMVEMSECANILHQATSRSLVILDEIGRGTSTYDGLAIAWAV 715
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
E L E+ + TLFATH+HEL LA E G+ N++V+ + + ++ LY
Sbjct: 716 AEFLHEK-KIMTLFATHYHELVELAGEYP---------GIKNFNVA--VKTFEDQIIFLY 763
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
++ PG +S+G+ VA A P+ V+ A++ LE+ T
Sbjct: 764 RLLPGPASESYGVQVAALAGLPKEVIARAKDILKSLENKT 803
>gi|20089412|ref|NP_615487.1| DNA mismatch repair protein MutS [Methanosarcina acetivorans C2A]
gi|44888230|sp|Q8TTB4.1|MUTS_METAC RecName: Full=DNA mismatch repair protein MutS
gi|19914310|gb|AAM03967.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
Length = 900
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 239/768 (31%), Positives = 373/768 (48%), Gaps = 81/768 (10%)
Query: 150 ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLR 209
E G+ ++D++ +F D +F + S L + EC+LP +SE
Sbjct: 145 EKEMEFGISFLDISTGEFLTTQFTDSENFDKLLSELARMHPAECILPPSLYGNSE----- 199
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGF-------------EI 256
LT + + +VQ+ V G+ E L + F E
Sbjct: 200 ---------LTGK----LREHTIVQEFAPEVFGTEEAGEKLKTHFGVATLEGMGCQKLEF 246
Query: 257 APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
A + A L YA+ +R YS +M LDS +R L ++++ D SL
Sbjct: 247 AVYSAWAALEYAKTTQMRDLTHINTLRTYSNTEFMILDSITLRNLEIVKNVRDEGDENSL 306
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
+ +N T T MG R L WL +PLL V +IN RLD ++ +D+ LR D+R L + D
Sbjct: 307 YRTLNCTRTP-MGNRTLKKWLLKPLLSVEKINPRLDAIEELAEDSLLRYDIRDWLSDVRD 365
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
IERL+ + A + +V L +S +P +R +L + + +F ++KE + L S ++
Sbjct: 366 IERLVGRIVYGNASARDLVALKKSLGVVPSLRDSLLE-KARFE-MLKE-IAEGLASFSEL 422
Query: 437 DHLNKFIALV---ETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
+ L + I + E V + E G MI S Y L L++ + ++ I + ++
Sbjct: 423 EELAEMIEIAIMDEPPVSVR--EGG--MIKSGYSPELDELRDISSNSKQWIAAFQQKERE 478
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+ K+LK+ FG+ +T ++ + +I +T + +F +LK+
Sbjct: 479 RSGI---KSLKVGYNKVFGYYIEVTHANSSQVPE----DYIRKQTMANAERFFTPELKEK 531
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
E+ + E+ + +T S + A + LDVL S A+ + Y
Sbjct: 532 ESLILTANEKAVALEYEIFAEITRTLSARSRELQETAERIGTLDVLASLAEATEN--NNY 589
Query: 614 TRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
TRP + + I++ RHP VE+ F+PND ++ ++ F ++TGPNM GKST++
Sbjct: 590 TRPQLT--EDCKILIRDGRHPVVESTVSGGFVPNDTEMDCKENQFLLVTGPNMAGKSTYM 647
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQ + +MAQVGSFVP AS+ + D +F R+GA D G STFM EM+E A+IL A
Sbjct: 648 RQTALIAIMAQVGSFVPASYASVGIIDQVFTRIGAFDDLASGQSTFMVEMVELANILNNA 707
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE----IRAPTLFATHFHELTALAHENA 789
+ +SL+++DE+GRGTSTYDG+ +A A+ E L IRA LFATH+H+LTAL
Sbjct: 708 SPKSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVGIRA--LFATHYHQLTAL----- 760
Query: 790 NEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLA 849
+++ V NYH++ D +L L K+ PGA D+S+GIHVA A PE V+ A
Sbjct: 761 ----EEKLKRVKNYHIAVKED--GHELVFLRKIVPGATDRSYGIHVARLAGVPEKVIERA 814
Query: 850 REKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFL 897
E ELE V+ + E G K+K S+ AR Q L
Sbjct: 815 NEILKELER---ENVLEEAEDGENGKKKK--------SKATARYTQML 851
>gi|379795662|ref|YP_005325660.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356872652|emb|CCE58991.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 834
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 202/614 (32%), Positives = 314/614 (51%), Gaps = 61/614 (9%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 207 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 265
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I +RLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 266 INKQQIESRLDIVDEFSKHFIERDTLRNYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 325
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
+P I++ L + + + L+PL DD L + + + G +
Sbjct: 326 SEIPNIKALLNSMNQETIEQVNQ--LEPL-----DDLLEVLEQSLVEEPPISVKDGGLFK 378
Query: 462 I--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGH 513
+ + D L A KN E ++ ERQ + K+LK+ FG+
Sbjct: 379 VGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNKVFGY 425
Query: 514 VFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
IT+ EP ++ +T + +F +LK+ D ++ +
Sbjct: 426 FIEITRANLQNFEPS-----NFGYMRKQTLSNAERFITDELKEKEDIILGAEDKAIELEY 480
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
+L ++ + ++E + A ++SELD L SFA++A YTRP + ++I
Sbjct: 481 QLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPTFSDNKTLNLI-- 536
Query: 630 GSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
SRHP VE D+ +++PNDC+L +++ +ITGPNM GKST++RQV + +MAQ+G++
Sbjct: 537 ESRHPVVERVMDYNDYVPNDCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMGAY 595
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GRGT
Sbjct: 596 VPCQEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGT 655
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
STYDG LA A+ E++ E A TLF+TH+HELT L + + + N HV+A
Sbjct: 656 STYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVHVAA- 705
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR------EKAAELEDFTPS 862
+ +L L+KV+ GA D S+GI VA+ A+ PE V+ A+ E+ A + P
Sbjct: 706 -NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVINRAQVILNDFEETAGKKQINPE 764
Query: 863 AVISDDAKIEVGSK 876
+ D I+V SK
Sbjct: 765 ITKNADEIIQVESK 778
>gi|197301744|ref|ZP_03166814.1| hypothetical protein RUMLAC_00470 [Ruminococcus lactaris ATCC
29176]
gi|197299184|gb|EDY33714.1| DNA mismatch repair protein MutS [Ruminococcus lactaris ATCC 29176]
Length = 877
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 210/626 (33%), Positives = 323/626 (51%), Gaps = 46/626 (7%)
Query: 262 GALLSYAELLSDESNYGNY-YIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLM 320
GALL+Y L + +++ N ++ Y YM LDS+ R L + E+ + K SL ++
Sbjct: 232 GALLTYL-LETQKNSLSNLTHLTPYVTGKYMMLDSSTRRNLELCETLREKQKRGSLLWVL 290
Query: 321 NRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERL 380
++T TA MG R L +++QPL+D NEIN RLD V+ + R+++R++L + D+ERL
Sbjct: 291 DKTRTA-MGARTLRKFVEQPLIDKNEINRRLDAVEELKEQAISREEIREYLSPVYDLERL 349
Query: 381 MHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDH 438
+ + A + + S LP IR L++ + L++E Y LD LE L D
Sbjct: 350 ITKITYGSANPRDLTAFKSSLEMLPPIRYILEEMK---VPLLQEIYEDLDALEDLCD--- 403
Query: 439 LNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
LV ++ + ++ G +I Y+ + L+ + + + L +
Sbjct: 404 ------LVTKAIREEPPIAMKEGN-IIREGYNEEVDKLRRAKSDGKDWLAKLEEDEREKT 456
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K LK+ FG+ +T + + T + +T + ++ +LK+L D
Sbjct: 457 GI---KNLKIKYNKVFGYYLEVTNSYKDLVPDYYTRK----QTLANAERYITPELKELED 509
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
++ + EL + V +T E + A ++ LDV S A +A Y R
Sbjct: 510 MILGAEDKLYALEYELYSEVRETIAAQVERIQKTAKAVAGLDVFTSLALVAER--NHYVR 567
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
P IN + DI + RHP VE + FI ND L K+ IITGPNM GKST++R
Sbjct: 568 PKINEKGIIDI--KEGRHPVVEKMIPNDMFISNDTYLDDKKNRISIITGPNMAGKSTYMR 625
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q + LMAQVG FVP A+I + D IF RVGA D G STFM EM E A+IL+ AT
Sbjct: 626 QTALIALMAQVGCFVPAQSANIGLSDRIFTRVGASDDLASGQSTFMVEMTEVANILRNAT 685
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEF 792
+SL+I+DE+GRGTST+DG +AWA+ E++ + + A TLFATH+HELT L + N
Sbjct: 686 SKSLLILDEIGRGTSTFDGLSIAWAVVEYISDSKLLGAKTLFATHYHELTELEGKIEN-- 743
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
V NY ++ + + L K+ G D+S+GI VA+ A P+ V+ A+E
Sbjct: 744 -------VNNYCIA--VKEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPDLVINRAKEI 794
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRK 878
EL D ++ +S+ A E +K+K
Sbjct: 795 VEELSDEDITSRVSEIAAREHTAKKK 820
>gi|324506957|gb|ADY42957.1| DNA mismatch repair protein MSH2 [Ascaris suum]
Length = 414
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 150/367 (40%), Positives = 228/367 (62%), Gaps = 21/367 (5%)
Query: 501 KALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRK-DGVKFTNTKLKKLGDQYQK 559
K+ KLD Q+G FR+T K E IR+ +LET K GV+FT+ L+ L ++Y++
Sbjct: 31 KSAKLDSNPQYGFFFRVTLKAEKSIRQ---AGLKILETTKGSGVRFTSKALEALNNEYKE 87
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
+ ++Y + Q EL+ VI+T ++ + L+ L+ +DVL++FA LA+ P PY+RP +
Sbjct: 88 LQKQYDSSQSELIKMVIETCAGYAPALQQLSECLAVIDVLVAFATLATLSPFPYSRPQLI 147
Query: 620 PPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGK-----SWFQIITGPNMGGKSTFI 673
+ ++L+ RHP +EA + FIPND ++ G+ + F ++TG NMGGKST++
Sbjct: 148 DKESRVLVLKSCRHPVLEALPEAPPFIPND--VLMGENPEDSTRFLLLTGANMGGKSTYL 205
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
R + +LM Q+G FVPC+ A S+ D I R+G+ D Q +GVSTFM EM+++ASIL+ A
Sbjct: 206 RSCALCVLMGQMGCFVPCEYAKFSLIDGIHTRIGSCDYQCKGVSTFMAEMIDSASILEAA 265
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFN 793
T +SL+++DELGRGTSTYDGFGLAWAI + ++ I+ +FATHFHE++AL N
Sbjct: 266 TSKSLVVVDELGRGTSTYDGFGLAWAIADDILARIKCLCIFATHFHEMSALHERYPN--- 322
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
+ N V ID +L +LYKV PG ++SFGI++A+ + ++ A
Sbjct: 323 -----ALRNIRVETQIDENG-ELILLYKVMPGIAERSFGINIAKLVGISDDIIEEAEVML 376
Query: 854 AELEDFT 860
+LE T
Sbjct: 377 QKLEKNT 383
>gi|283770359|ref|ZP_06343251.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus H19]
gi|283460506|gb|EFC07596.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus H19]
Length = 872
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 311/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMTEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|89100701|ref|ZP_01173557.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
gi|89084576|gb|EAR63721.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
Length = 883
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 304/583 (52%), Gaps = 50/583 (8%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y + +M++D + R L + E+ K SL L++ T TA MG R+L W+ +PL+D
Sbjct: 247 YQVHQFMKIDYFSKRNLELTETIRSKGKKGSLLWLLDETKTA-MGARMLKQWIDRPLIDK 305
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I R +VQ+ +DD RQDLR+ LK + D+ERL + + +++L S +++
Sbjct: 306 EAIGRRHSLVQSLLDDYFARQDLREKLKEVYDLERLAGRVAFGNVNARDLIQLKSSLLQV 365
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ----LENGEY 460
P ++ + + + + + E+ LD E +TD L+E+++ +D +++G
Sbjct: 366 PLLKELVGGLQNEDAKALAEK-LDACEEITD---------LLESAI-VDNPPISVKDGN- 413
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
MI Y L ++ + + I L Q + K+LK+ FG+ +TK
Sbjct: 414 MIRDGYHDELDQYRDASRNGKTWIAQLEAQERERTGI---KSLKIGYNRVFGYYIEVTKA 470
Query: 521 -----EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRV 575
EE + +K +T + ++ +LK+ + E + EL V
Sbjct: 471 NIHLLEEGRYDRK--------QTLANAERYITPELKEKETLILEAEERITELEYELFCHV 522
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ +SLA +SELDVL FA ++ Y RP + +I ++ RHP
Sbjct: 523 RDHVKEYIPRLQSLARTVSELDVLQCFAQISED--RHYVRPVFSGNR--EISVKEGRHPV 578
Query: 636 VE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE D ++PNDC + G+ +ITGPNM GKST++RQV + ++AQ+G +VP A
Sbjct: 579 VEKVMDSQEYVPNDCVMGDGRELL-LITGPNMSGKSTYMRQVALTSILAQIGCYVPASEA 637
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+ + D +F R+GA D + G STFM EMLE + + AT SLI+ DE+GRGTSTYDG
Sbjct: 638 VLPIFDQVFTRIGAADDLISGQSTFMVEMLEAKNAIANATQNSLILFDEIGRGTSTYDGM 697
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
LA AI E++ I A TLF+TH+HELT LA E + + N HVSA I+
Sbjct: 698 ALAQAIIEYIHSRIGAKTLFSTHYHELTVLAEE---------LPDLQNIHVSA-IEQNG- 746
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
K+ L+K++ GA D+S+GIHVA+ A P ++ A E +LE
Sbjct: 747 KVVFLHKIKEGAADKSYGIHVAQLAELPSELIDRANEILEKLE 789
>gi|334128878|ref|ZP_08502756.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
gi|333386120|gb|EGK57340.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
Length = 863
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 214/648 (33%), Positives = 326/648 (50%), Gaps = 53/648 (8%)
Query: 291 MRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINAR 350
M+LD+ +R L + S D K +LF +++ T T MG RLL WL+ PLL + I+AR
Sbjct: 262 MQLDTYTLRNLEITRSLRDGGKKNTLFDVLDFTRTP-MGTRLLKSWLEHPLLVPHRIDAR 320
Query: 351 LDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSA 410
LD V V+ + LR LR HL+ + D ERL+ +E + A + +V L S LP IR
Sbjct: 321 LDAVAELVEKSPLRASLRDHLRSVYDFERLLTRIETQTANARDLVALRVSLAALPAIRET 380
Query: 411 LQQYEGQFSSLIKERYLDPLESLTDDDHLNKFI--ALVETSVDLDQLENGEYMISSSYDT 468
L E S+L+ Y ++ D L + A+V+ L E G +I + YD
Sbjct: 381 LSTAE---SNLLTRVY----AAIQTFDELRDTLERAIVDEP-GLSVREGG--IIRTGYDA 430
Query: 469 GLS---ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
L A ++ ++L +++ ++T + + K LK+ FG+ +
Sbjct: 431 ALDELHAFSHDSKTLLQEMEE-RERTRTGI-----KTLKIGYNKVFGYYIEVRHSG---- 480
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
R ++ +I +T + +F +LK + E+ + + ++ +
Sbjct: 481 RDQVPDDYIRKQTLANTERFITEELKVFEAKILGAEEKITALEYHIFTQLREQVKAQLVP 540
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA--QDWVN 643
+++A ++ +DVL S A+ A+S Y RP + G I++ RHP VE Q V
Sbjct: 541 IQNVARAIARVDVLQSLAEAAASYR--YVRPRVTAG--GAILIRDGRHPLVERILQREV- 595
Query: 644 FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIF 703
F+PND + G + +ITGPNM GKST++RQV + LMAQVGSFVP A I+ D IF
Sbjct: 596 FVPNDTDISHGGTETMLITGPNMAGKSTYMRQVALLTLMAQVGSFVPARTAEIAPVDRIF 655
Query: 704 ARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEH 763
R+GA D + G STFM EM E A IL+ AT SL+I+DE+GRGTST+DG +A A+ EH
Sbjct: 656 TRIGASDDLVSGQSTFMVEMNEVAQILREATRDSLVILDEIGRGTSTFDGMSIARAVVEH 715
Query: 764 LVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVE 823
+ I A TLFATH+HELT + +E + NY ++ + +K+ L ++
Sbjct: 716 IDTRIHAKTLFATHYHELTDMENER-----------IRNYCIA--VREKGKKVAFLRRIV 762
Query: 824 PGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
GA D+S+GIHVA A P V A E LE S+ A S+ + +D
Sbjct: 763 AGAADKSYGIHVARLAGLPAKVTERAEEILHALEQ---KEAQSEGAAPIPASRETKPAD- 818
Query: 884 NDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAGDC 931
+ A L E + + TM EA+ + R+++ K+AG
Sbjct: 819 ---GMTSLFADGTLAELRTLDVMTMTPLEAMNTLYRLQEQARKEAGQA 863
>gi|223939292|ref|ZP_03631172.1| DNA mismatch repair protein MutS [bacterium Ellin514]
gi|223892005|gb|EEF58486.1| DNA mismatch repair protein MutS [bacterium Ellin514]
Length = 876
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 204/621 (32%), Positives = 314/621 (50%), Gaps = 48/621 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLES-KTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
Y Y+ LD +R L +LE DA KN +L+G +NRT T MG R L WL QPL D
Sbjct: 280 YQASDYLTLDIITLRHLEILEPLHRDAAKNATLYGALNRTVTP-MGARRLRDWLSQPLAD 338
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
I R + VQ ++++ + + R L ++ D+ER + L + + L + +
Sbjct: 339 AKAIGCRQNAVQTWMENVSALEQFRAQLTQVRDLERTLGRLSAGTGNARDLAALRLALEQ 398
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDL-DQL------- 455
+P +RS L G +S L E +++ L + + V DL DQ+
Sbjct: 399 VPMLRSILA---GLPTSGAGNGLLQEAEEISEPSLLGELGSQVVELPDLIDQIARAIADE 455
Query: 456 ------ENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
E G +I +D L L+ S + I L + +++ +LK+ +
Sbjct: 456 PPLALKEGG--LIRDGFDPALDELRAASRSGKDWIAKLQQ---DEIERTGISSLKVRFNS 510
Query: 510 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQK 569
FG+ +T K+ + +I +T +G +F +LK++ + E +
Sbjct: 511 VFGYYIEVTASNLSKVPQ----HYIRKQTIANGERFITPELKEMEGKILGAEERSIKLEY 566
Query: 570 ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILE 629
EL RV + + + A+ L++LDVL SFA+ A Y RP + +V +I
Sbjct: 567 ELFLRVREVMLARLPEIQQTASALAQLDVLGSFAETARLYS--YCRPQVGTENVVNI--R 622
Query: 630 GSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
RHP +E F+ ND +L + + +ITGPNM GKST+IRQV + +L+A GSF
Sbjct: 623 DGRHPVLEQNLSEERFVSNDTQLDQ-QVQVALITGPNMAGKSTYIRQVALLVLLAHTGSF 681
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
+P A + + D IF R+GA D RG STFM EM ETA+IL AT +SLII+DE+GRGT
Sbjct: 682 IPAAEARVDLVDRIFTRIGASDDLARGQSTFMVEMSETANILNNATAKSLIILDEIGRGT 741
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
ST+DG LAW+I EHL ++ A TLFATH+HELT LA ++ + NY+V+
Sbjct: 742 STFDGLSLAWSIVEHLHNQVGAKTLFATHYHELTELA---------GRLPRIKNYNVA-- 790
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--DFTPSAVIS 866
+ + ++ L K+ G D+S+GI VA A P++V+ A+E LE + TP +
Sbjct: 791 VREWNDQIVFLRKIIEGGTDKSYGIQVARLAGVPKAVIERAKEILHNLEESELTPEGNVR 850
Query: 867 DDAKIEVG-SKRKRISDPNDM 886
A+ K K+++ P +
Sbjct: 851 QQARHRAERDKLKKLAPPPQL 871
>gi|399155414|ref|ZP_10755481.1| DNA mismatch repair protein MutS [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 926
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 223/741 (30%), Positives = 358/741 (48%), Gaps = 74/741 (9%)
Query: 155 IGLGYVDLTKRVLGLAEF-LDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
+G+ +VDL+ +AEF L+++H L L +E LL T++ E L + +
Sbjct: 142 LGIAFVDLSTGEFEVAEFHLNETH--RFYDFLAQLTPQEILL-TQSRSEIESTFLEELVQ 198
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPV------------------RDL----- 250
R +L + + ++ + + L V P R+L
Sbjct: 199 RMTQLLDKMNSADARSVTSSEQISGLQNAQVFPSTGRFNFIDPYHFDPEATQRNLNNHFE 258
Query: 251 ---VSGFEI-----APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALN 302
+SGF + A GALL Y E +R+Y+ D M LD A + L
Sbjct: 259 TLNLSGFGVDDLPHGIAAAGALLRYLEETQKCDLSHLTALRRYAFDKTMLLDEATVANLE 318
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
+ ES++ A K+ +L+ ++N T T MG RL WL+QPLLDV IN R D ++ F ++
Sbjct: 319 LFESQSGARKH-TLYHILNHTKTP-MGARLFRQWLRQPLLDVEAINERFDCIEEFRNNFM 376
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
L ++ R+ L+ I D+ R++ + G+ +V L +S + + + L + + I
Sbjct: 377 LCEEFRECLENIQDLPRIIGRITLPVVGVNDLVALRESLEPVQKLPTYLAELQAPLLKKI 436
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM---ISSSYDTGLSALKNEQES 479
E + + L V +L G +M +S D +N ++
Sbjct: 437 AENFDPLTDLLDLLYQRLLEAPSV-------KLREGGFMAAGVSEELDELREISRNSKQF 489
Query: 480 LERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETR 539
L + + LH++ + + +LK+ FG+ ++ + + + +I +T
Sbjct: 490 LNKML--LHEREITGIS-----SLKISYNKVFGYYLEVSNVHKSSVPE----HYIRKQTL 538
Query: 540 KDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVL 599
+ ++ +LK+ ++ E + EL ++ + + + A ++ D L
Sbjct: 539 VNAERYITAELKEFEEKILTAEERIGELEYELFQQLKTEINSNTRRVQQTANDIAVADTL 598
Query: 600 LSFADLASSCPTPYTRPDINPPDVG-DIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSW 657
A +A + Y RP ++P + + L+ SRHP +E D F+PND L K
Sbjct: 599 AGLAFVAEN--NHYVRPSLHPLEAPRKLFLKDSRHPVIEQIDLGEVFVPNDLDLEELKCR 656
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
+ITGPNM GKST++RQV + +LMAQ GSFVP + SV D IF RVGA D G S
Sbjct: 657 IMLITGPNMAGKSTYMRQVALIVLMAQCGSFVPVSSSEFSVVDRIFTRVGASDNLTLGQS 716
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EM E A+IL AT+RSLII+DE+GRGTST+DG +AWAI E+ ++++ A TL ATH
Sbjct: 717 TFMLEMNEAAAILNNATERSLIILDEIGRGTSTFDGISIAWAIVEY-IQKLSALTLCATH 775
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
+HELTA+A E + V N+ S ++ K+ L K+ G D+S+G+ VA
Sbjct: 776 YHELTAIAQE---------LDSVKNF--SIRVEEEGEKIVFLRKIVSGEADKSYGVQVAR 824
Query: 838 FANFPESVVTLAREKAAELED 858
A P+SVV A E +LE+
Sbjct: 825 LAGLPKSVVNRALEVMEQLEE 845
>gi|425455709|ref|ZP_18835422.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9807]
gi|389803365|emb|CCI17705.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9807]
Length = 882
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 207/627 (33%), Positives = 309/627 (49%), Gaps = 70/627 (11%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A G LL Y E + ++ YS+ ++ LD R L + ++ D + SL
Sbjct: 274 AAGGLLEYIEDTQKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWA 333
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RTCTA MG R L WL QPLLD I AR D +Q D+ +LRQD+RQ L+ I DIER
Sbjct: 334 IDRTCTA-MGSRALRRWLLQPLLDSRGIRARQDTIQELKDNPSLRQDIRQKLREIYDIER 392
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRL------------PYIRSALQQYEGQFSSLIKERYL 427
L + A + ++ L S ++L PY++ ALQQ L ++
Sbjct: 393 LSGRVGAGTANARDLLSLAASLVKLADLAALVASGNSPYLK-ALQQIPADLEKLGQQ--- 448
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
IA + S L E G +I D L AL+ + + + +L
Sbjct: 449 --------------VIAHLVESPPLHLKEGG--VIREGIDAQLDALRRDYQEVIDWFKNL 492
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE---PK--IRKKLTTQFIVLETRKDG 542
+ LK++ FG+ + + + PK +RK Q +V E R
Sbjct: 493 ETTEKERTGI---SNLKVNYNKTFGYYISLPRSKADFAPKDYVRK----QTLVNEER--- 542
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
+ T+LK+ + ++E + E+ + + + FS + +AT ++ LDVL
Sbjct: 543 --YITTELKEKENIILTAVDELNKLEYEIFSDLRRQVAEFSPEIREVATKVAALDVLAGL 600
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVNF-IPNDCKLIRGKSW---- 657
A++A Y RP+I + DI + RHP VE F +PN L +
Sbjct: 601 AEIA--VYQGYCRPEIADGRLIDI--KDGRHPVVEQSLGAGFFVPNSINLGNQEGLEYPD 656
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
I+TGPN GKS ++RQVG+ L+AQ GSFVP A IS+ D IF RVGA D G S
Sbjct: 657 LIILTGPNASGKSCYLRQVGLIQLLAQTGSFVPAKSAKISICDRIFTRVGAVDDLATGQS 716
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EM ETA+IL AT+RSL+++DE+GRGT+T+DG +AW++ E+L +++ T+FATH
Sbjct: 717 TFMVEMNETANILNHATERSLVLLDEIGRGTATFDGLSIAWSVAEYLATVLQSRTIFATH 776
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
+HEL LA N VANY V+ + ++ L++V PG D+S+GI
Sbjct: 777 YHELNELASILEN---------VANYQVT--VKELPHEIVFLHQVRPGGADKSYGIEAGR 825
Query: 838 FANFPESVVTLAREKAAELEDFTPSAV 864
A P SV+ A + ++E + A+
Sbjct: 826 LAGLPASVIDRAMQVMGQIEKHSKIAI 852
>gi|357237900|ref|ZP_09125239.1| DNA mismatch repair protein MutS [Streptococcus ictaluri 707-05]
gi|356753404|gb|EHI70519.1| DNA mismatch repair protein MutS [Streptococcus ictaluri 707-05]
Length = 850
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 232/794 (29%), Positives = 376/794 (47%), Gaps = 107/794 (13%)
Query: 151 NGCTIGLGYVDLTK---RVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKT 207
+G GL Y+DL+ RV LA+FL +V+S + L +E LL E S E +T
Sbjct: 134 DGTHYGLSYMDLSTGEFRVTDLADFL------SVKSEIQNLKAREVLLGFEL--SDEEQT 185
Query: 208 LRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSY 267
+ L ++ D + + +RL++ P+ V+ LL+Y
Sbjct: 186 V----------LVKQMNLLLSFEDTLYEDERLIKADFSPIERSVAA---------KLLNY 226
Query: 268 AELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAG 327
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA
Sbjct: 227 VHTTQMRELSHLQELVHYEIKDYLQMSYATKSSLDLVENARTGKKHGSLYWLLDETKTA- 285
Query: 328 MGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKR 387
MG RLL W+ +PL++ I R +I+Q F+D R DL LK + DIERL +
Sbjct: 286 MGMRLLKTWIDRPLVNKEAILERQNIIQVFLDAFIERTDLSDSLKGVYDIERLSSRVSFG 345
Query: 388 RAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVE 447
+A + +++L + ++P I++ L+ + + L+K + V+
Sbjct: 346 KANPKDLLQLGHTLGQVPLIKAILESFNSPY--------------------LDKLVNQVD 385
Query: 448 TSVDLDQLENGEYMISSSYDTGLSALKNE--------QESLERQIHSLHKQTASDLDLPV 499
T +L+QL I S+ D A NE E L+ + + T D+
Sbjct: 386 TIPELEQL------IRSAIDPDAPATINEGNIIRTGFDERLDHYRKVMREGTGWIADIEA 439
Query: 500 DK-------ALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK 552
+ LK+D + G+ F +T + F T K+ ++ T+L K
Sbjct: 440 KERQNSGINNLKIDYNKKDGYYFHVTNSNLSMV----PDYFFRKATLKNSERYGTTELAK 495
Query: 553 LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
+ Q + EE + + ++ R+ T+ + ++LA L+ +DVL S + +A
Sbjct: 496 IEGQMLEAREESSSLEYDIFMRIRAKVETYIDRLQALAKALATIDVLQSLSFVAEK--NH 553
Query: 613 YTRPDINPPDVGDIILEGSRHPCVE----AQDWVNFIPNDCKLIRGKSWFQIITGPNMGG 668
Y RP N I ++ RH VE AQ++ I ND + G++ Q+ITGPNM G
Sbjct: 554 YIRPQFNQKH--QINIQEGRHAVVEKVMGAQEY---ISNDI-IFDGQTSIQLITGPNMSG 607
Query: 669 KSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETAS 728
KST++RQ+ + ++MAQ+GSFV + + D IF R+GA D + G STFM EM+E
Sbjct: 608 KSTYMRQLALTVIMAQMGSFVAAQSVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANH 667
Query: 729 ILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHEN 788
+K A+ SLI+ DELGRGT+TYDG LA +I EH+ +++ A T+FATH+HELT L
Sbjct: 668 AIKRASQDSLILFDELGRGTATYDGMALAQSIIEHIHDQVGAKTMFATHYHELTGL---- 723
Query: 789 ANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTL 848
+ + + N HV+ I +T L+K+ G D+S+GIHVA+ A P S++
Sbjct: 724 -----STILTSLVNVHVA--ILEKDGDVTFLHKIAQGPADKSYGIHVAKIAGLPNSLLKR 776
Query: 849 AREKAAELEDFTPSAVIS----DDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMP 904
A ELE P A+ S DD+ + + D D + + L + P
Sbjct: 777 ADTVLQELESKQPLAMTSHTDKDDSSATNSKAQLSLFDTEDKVTAIIQELEALDIMNLTP 836
Query: 905 LETM----DLKEAL 914
++ M DLK+ L
Sbjct: 837 MQAMTTLYDLKKRL 850
>gi|78043130|ref|YP_360229.1| DNA mismatch repair protein HexA [Carboxydothermus hydrogenoformans
Z-2901]
gi|90109842|sp|Q3ACA5.1|MUTS_CARHZ RecName: Full=DNA mismatch repair protein MutS
gi|77995245|gb|ABB14144.1| DNA mismatch repair protein HexA [Carboxydothermus hydrogenoformans
Z-2901]
Length = 841
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 212/688 (30%), Positives = 351/688 (51%), Gaps = 50/688 (7%)
Query: 184 ALVALGCKEC---LLPTEAVKSSECKTLRDALTRCG---VMLTERKKTEFKTRDLVQDLD 237
L+AL E L +V + + L + R ++ + K F +D+ ++
Sbjct: 134 GLIALAVAEVSTGYLGITSVDEGKIEVLASEIRRLAPTEAVVLKNFKNNFLLKDITGIVN 193
Query: 238 RLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDE--SNYGNYYIRKYSLDSYMRLDS 295
L + E + G E + A L+SY + + S +G Y +DSY+ D
Sbjct: 194 YLEKLPAEEIEIAFKGPEASKEAYKILISYLKRIEPAVLSIFGQPEF--YQIDSYLYFDE 251
Query: 296 AAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQ 355
+ + L +L ++ D + SL G+++ T TA MG R L L +PLL++ I RLD V+
Sbjct: 252 STRKNLEILRNREDNSS--SLLGIIDFTQTA-MGARKLKEELTKPLLNLKAIADRLDAVE 308
Query: 356 AFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYE 415
V+D LR++LR++LK + D+ERL L + ++K+ QS ++ +I++++ +
Sbjct: 309 ILVNDYELRENLRENLKNLYDLERLSIKLVCGTINPKDLIKIKQSLPQIWHIKNSINHVK 368
Query: 416 GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLS 471
+ S L E Y + E + + L++ S+ + + G +I + Y+ +
Sbjct: 369 NK-SVLFAEIYKNLPE-------MREVYNLIDKSIVDDPPVSPKDGG--IIKNGYNPTVD 418
Query: 472 ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTT 531
+ +E + I + K+ + K+LK++ FG+ +TK +
Sbjct: 419 EYRKAREEGQDWIINYEKKERERTGI---KSLKVNYNKVFGYFIEVTKANLHLVPADYQR 475
Query: 532 QFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLAT 591
+ +T + +F +LK + E+ N + EL + + + E K A+
Sbjct: 476 K----QTMVNAERFITEELKHYENLILGASEKLANLEYELFCEIRSEILKYQEDLKRAAS 531
Query: 592 MLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCK 650
++ LD L+S A ++ +TRP I V +I + RHP VE + NF+PND
Sbjct: 532 AVALLDFLISLA--VAAIEYDFTRPVITAEPVLEI--KNGRHPVVEKSVGRANFVPNDLY 587
Query: 651 LIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGD 710
L ++ +ITGPNM GKST++RQ + +++AQ+GSFVP + A + + D I R+GA D
Sbjct: 588 LDTKENSLLLITGPNMAGKSTYMRQAALIVILAQIGSFVPAEYARVGLVDKILTRIGATD 647
Query: 711 CQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRA 770
+G STFM EM+E +IL+ AT RSLI++DE+GRGTSTYDG +A AI E++ ++I+A
Sbjct: 648 DLAKGQSTFMVEMIECNNILRNATSRSLILLDEVGRGTSTYDGISIAEAIIEYIQKKIKA 707
Query: 771 PTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQS 830
TLF+TH+HELT L E + GV N+ V + ++ L+KV PG D+S
Sbjct: 708 RTLFSTHYHELTGLEGE---------IPGVKNFTV--LVQEKGEEVKFLHKVVPGKTDKS 756
Query: 831 FGIHVAEFANFPESVVTLAREKAAELED 858
+GI+VA+ A P VV A E A ED
Sbjct: 757 YGIYVAKLAGLPREVVERAYEILARFED 784
>gi|406981178|gb|EKE02687.1| hypothetical protein ACD_20C00346G0014 [uncultured bacterium]
Length = 863
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 327/641 (51%), Gaps = 70/641 (10%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA++ Y E + + Y L SY+ +D+ R L ++++ D N SL
Sbjct: 259 AAGAIVEYLEETQKQGIPEFDTLIPYMLTSYVSMDANTRRNLELVQTVRDNNYKGSLLWA 318
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++TCT MG RLL W++QPL DVN+I +R + V+ ++++ LR ++ L + DIER
Sbjct: 319 IDKTCT-NMGLRLLRKWIQQPLKDVNKIKSRQNAVEELLENSKLRLEISSLLDKTYDIER 377
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + A + + L S LP L + F S+ E E L D
Sbjct: 378 LATRISNNTANARDFIALKDSLKLLPEFGKLLSNAKSPFLSVFAEVK----EELVD---- 429
Query: 440 NKFIALVETSVDLDQ---LENGEYM---ISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
F ++VE ++ + L+ G + +S D L +E L + + ++T
Sbjct: 430 --FSSIVERTIAENPPVGLKEGNLIRRGVSEELDYLKELLTGGREWLTKFENDEKEKTGV 487
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTT---QFIVLETRKDGVKF 545
++LK+ FG+ +T + IRK+ T ++I E ++ +
Sbjct: 488 -------RSLKVGYSKTFGYFIEVTHANTNLVPDYYIRKQTLTNAERYITPELKEHETEV 540
Query: 546 TNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
+ + + + +YQ + + + KE F + + +A L LDVLLSFA++
Sbjct: 541 LSAETRSIDLEYQ-IFSDLREYAKE-----------FVQPMREIAKALCALDVLLSFANV 588
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRG------KSWF 658
A Y +P+I+ + D++++ RHP +E ++PND G F
Sbjct: 589 A--VEFNYVKPEID--ESYDLLIKEGRHPVIEKLLPLGKYVPNDLDSKGGDVGSQNTCQF 644
Query: 659 QIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVST 718
I+TGPNM GKST++RQ + +++AQ+GSFVP A I + D IF RVGA D G ST
Sbjct: 645 MILTGPNMAGKSTYMRQNALIVILAQIGSFVPAKAAKIGIVDKIFTRVGAVDDLSTGQST 704
Query: 719 FMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHF 778
FM EM ETA IL ATDRSLI++DE+GRGTSTYDG +AW++ E++VE I+A T+FATH+
Sbjct: 705 FMVEMNETALILNSATDRSLILLDEIGRGTSTYDGVAIAWSVAEYIVENIKARTIFATHY 764
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HE+ + +ANY V+ + + ++ L +V PG ++S+GI VA+
Sbjct: 765 HEMNVMCERYPQ---------IANYQVT--VRENNHEIEFLRQVIPGGTNRSYGIQVAKM 813
Query: 839 ANFPESVVTLAREKAAELE-DFT---PSAVISDDAKIEVGS 875
A P SV++ A + ++ D+T P+A + + IEV S
Sbjct: 814 AGLPNSVISRAENLMSRMQKDYTAKLPNAKKNSNDDIEVNS 854
>gi|297208058|ref|ZP_06924489.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|296887301|gb|EFH26203.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
Length = 872
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 312/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLVPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|357053013|ref|ZP_09114117.1| DNA mismatch repair protein mutS [Clostridium clostridioforme
2_1_49FAA]
gi|355386438|gb|EHG33478.1| DNA mismatch repair protein mutS [Clostridium clostridioforme
2_1_49FAA]
Length = 889
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 215/685 (31%), Positives = 349/685 (50%), Gaps = 59/685 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA++ Y + + YS YM +D++ R L ++E+ + K +L +
Sbjct: 238 AAGAVMQYIYETQKSTLEHITTVTPYSTGQYMVIDTSTRRNLELVETMREKQKRGTLLWV 297
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG RLL ++QPL+ +EI R + V+ + R+++ ++L I D+ER
Sbjct: 298 LDKTKTA-MGARLLRACIEQPLIHRDEIIRRQNAVEELNMNYISREEICEYLNPIYDLER 356
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSS-LIKE--RYLDPLESLTDD 436
L+ + + A + ++ S LPYI+ L G+F+S L+ E R LDPL+ +
Sbjct: 357 LIGRISYKTANPRDLIAFRSSLEMLPYIKRIL----GEFNSELLAELGRELDPLQDIF-- 410
Query: 437 DHLNKFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
+ I A+VE + E G +I Y+ L+ + + + L +
Sbjct: 411 ----RLIGDAIVEEP-PITVREGG--IIKDGYNQEADKLRQAKTEGKNWLAELEAREKEK 463
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLG 554
+ K LK+ FG+ F +T + ++ +I +T + +FT +LK+L
Sbjct: 464 TGI---KTLKVKFNKVFGYYFEVTNS----FKDQVPDYYIRKQTLTNAERFTTDELKQLE 516
Query: 555 DQYQKVLEEYKNCQKELV----NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
D E+ + + +L +++ + + KS+A +DV S + +A+
Sbjct: 517 DIIMGAEEKLVSLEYDLFCEVRDKIGAEVIRIQKTAKSIAG----IDVFCSLSVVATR-- 570
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGK 669
Y +P IN D G I ++ RHP VE + F+ ND L GK+ +ITGPNM GK
Sbjct: 571 RNYVKPSIN--DKGVIQIKNGRHPVVEQMMRDDMFVANDTFLDNGKNRLSVITGPNMAGK 628
Query: 670 STFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASI 729
ST++RQV + +LMAQ+GSFVP A I + D +F RVGA D G STFM EM E A+I
Sbjct: 629 STYMRQVALIVLMAQLGSFVPAQEADIGICDRVFTRVGASDDLASGQSTFMVEMTEVANI 688
Query: 730 LKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHE 787
L+ AT SL+++DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT L
Sbjct: 689 LRNATRNSLLVLDEIGRGTSTFDGLSIAWAVIEHISNSKLLGAKTLFATHYHELTELEG- 747
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
+ GV NY ++ + + L K+ G D+S+GI VA+ A P+SV+
Sbjct: 748 --------TIAGVKNYCIA--VKEQGDDIVFLRKIVRGGADKSYGIQVAKLAGVPDSVIA 797
Query: 848 LAREKAAELEDFTPSAVISDDAKIEVG-SKRKRISDPN--DMSR----GAARAHQFLKEF 900
A+E A EL D +A + A+I ++ K + P+ DM + + ++E
Sbjct: 798 RAKEIAEELSDADITARAKEIAEISSNITQHKAVPKPDEVDMQQLSFFDTVKDDDIIREL 857
Query: 901 SDMPLETMDLKEALERVKRMKDDLE 925
+ L TM +A+ + R++ L+
Sbjct: 858 DSLELSTMTPLDAMNTLYRLQTKLK 882
>gi|365884294|ref|ZP_09423352.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. ORS 375]
gi|365287139|emb|CCD95883.1| DNA mismatch repair protein MutS [Bradyrhizobium sp. ORS 375]
Length = 914
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 215/659 (32%), Positives = 328/659 (49%), Gaps = 61/659 (9%)
Query: 289 SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEIN 348
S M +D A RA L + SL ++ T T+ G RLL L PL + +I
Sbjct: 295 STMAIDPA-TRANLELTRTLAGERRGSLLDAIDCTVTSA-GSRLLAQRLAAPLTEPAQIG 352
Query: 349 ARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLY-------QSS 401
RLD V FV D+A R+D+R L+ D+ R M L R G + + L Q+
Sbjct: 353 RRLDAVNVFVADSAAREDIRSILRGAPDMTRAMARLSVGRGGPRDLAALRDGILAADQAL 412
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
RL SAL Q + +S++ + ++F ++ + L + + G
Sbjct: 413 ARL----SALDQPPQEIASVMAA------LARPARALADEFARALDEQLPLIKRDGG--F 460
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
+ SSYD L +N +++ + S+ + A + KALK+ G+ +T +
Sbjct: 461 VRSSYDATLDETRNLRDASRLVVASMQARYADQTGV---KALKIRHNNVLGYFVEVTAQH 517
Query: 522 EPKI-RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
K+ L FI +T V+FT ++L ++ + E N + E+ R+ A+
Sbjct: 518 GDKLMSAPLNATFIHRQTLAGQVRFTTSELGEIEAKIANAGERALNLELEIFERLCAQAL 577
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE--- 637
+ ++ A + LDV + A LA Y RP+++ +G +EG RHP VE
Sbjct: 578 AIGDDLRAAAHGFAMLDVATALAKLAVD--DNYIRPEVDG-SLG-FAIEGGRHPVVEQSL 633
Query: 638 AQDWVNFIPNDCKLI------RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
++ FI N C L G+ W ++TGPNM GKSTF+RQ + L+AQ+GSFVP
Sbjct: 634 KREGQPFIANSCDLSPTPGHKSGQLW--LLTGPNMAGKSTFLRQNALIALLAQIGSFVPA 691
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
RA I + D +F+RVGA D RG STFM EM+ETA+IL A +R+L+I+DE+GRGT+T+
Sbjct: 692 SRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALVILDEIGRGTATF 751
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG +AWA EHL E R TLFATH+HELTALA + FN + +
Sbjct: 752 DGLSIAWAAIEHLHESNRCRTLFATHYHELTALAAKLPRLFNA-----------TVRVKE 800
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF----TPSAVISD 867
+ L++V PG+ D+S+GI VA+ A P +V++ A+ A+LE A++ D
Sbjct: 801 WQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVISRAKSVLAKLEAADRGQNARALVDD 860
Query: 868 DAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEK 926
V S+ ++P MSR + + S + + M +EAL+ + R+K L K
Sbjct: 861 LPLFAVPSRAA--AEPT-MSR---ETEELIAAVSALHPDEMTPREALDALYRLKAKLPK 913
>gi|282916555|ref|ZP_06324313.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus D139]
gi|282319042|gb|EFB49394.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus D139]
Length = 872
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 311/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|448741812|ref|ZP_21723769.1| DNA mismatch repair protein MutS [Staphylococcus aureus KT/314250]
gi|445547450|gb|ELY15719.1| DNA mismatch repair protein MutS [Staphylococcus aureus KT/314250]
Length = 872
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 311/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ Y+++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYIKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|19746989|ref|NP_608125.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS8232]
gi|25453124|sp|Q8NZ24.1|MUTS_STRP8 RecName: Full=DNA mismatch repair protein MutS
gi|19749244|gb|AAL98624.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS8232]
Length = 851
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 222/740 (30%), Positives = 366/740 (49%), Gaps = 84/740 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F+S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FNSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DTDAPATISEGS-IIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTTSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N D I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FN--DNHMITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLIRL 784
Query: 857 EDFTPSA-VISDDAKIEVGS 875
E + S +IS +K+E S
Sbjct: 785 ETQSRSTEIISVPSKVEPSS 804
>gi|417896167|ref|ZP_12540134.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21235]
gi|341841068|gb|EGS82540.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21235]
Length = 872
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 311/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALRSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|414079517|ref|YP_007000941.1| DNA mismatch repair protein MutS [Anabaena sp. 90]
gi|413972796|gb|AFW96884.1| DNA mismatch repair protein MutS [Anabaena sp. 90]
Length = 862
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 315/627 (50%), Gaps = 47/627 (7%)
Query: 254 FEIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKN 313
+A A G LL Y E + +R Y+L+ Y+ +D R L + ++ D +
Sbjct: 261 LPLAVRAAGGLLEYIEDTQKANPVSLQLLRTYTLNDYLIVDHQTRRNLEITQTVRDGTFH 320
Query: 314 FSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKR 373
SL ++RT TA MG R L WL QPLL++ I +R D +Q V++T LRQDLR LK+
Sbjct: 321 GSLLWALDRTSTA-MGSRALRRWLLQPLLEIKGIKSRQDTIQELVENTPLRQDLRHLLKQ 379
Query: 374 ISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESL 433
I D+ERL RA + +V L S RLP + ++ F + ++ LE L
Sbjct: 380 IYDLERLTVRAASGRANARDLVALADSFSRLPELSRLVEDARSPFLKAL-QKVPPSLEEL 438
Query: 434 TDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
+ H + +VE+ L+ G +I + + L K ES ++ I +L +
Sbjct: 439 AEKLHAH----IVESPPT--HLKEGG-LIRAGINPLLDERKATVESDQQWIANLEVDERT 491
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKL 553
+P LK+ FG+ I++ + ++ +I +T + ++ LK+
Sbjct: 492 RTGIPT---LKVGFNKTFGYYISISRNKSDQV----PDNYIRKQTLTNEERYITPDLKER 544
Query: 554 GDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPY 613
+ ++ + ++ + + + +EI +++A ++ DVL A+LA Y
Sbjct: 545 EARILTARDDLNQLEYQIFDALRDEVGSHAEIIRNIARAVAASDVLCGLAELA--VHQGY 602
Query: 614 TRPDINPPDVGDIILEGSRHPCVEAQDWVNF-IPNDCKL---------------IRGKSW 657
RP++ ++I RHP VE F +PN KL I
Sbjct: 603 CRPEMLTGREINVI--DGRHPVVEQSLPAGFFVPNSTKLGQLSVVSGQLSVETTIDNNPD 660
Query: 658 FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVS 717
I+TGPN GKS ++RQVG+ LMAQVGSFVP A + V D IF RVGA D G S
Sbjct: 661 LVILTGPNASGKSCYLRQVGLIQLMAQVGSFVPAKFAKLGVCDRIFTRVGAVDDLATGQS 720
Query: 718 TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATH 777
TFM EM ETA+IL AT RSL+++DE+GRGT+T+DG +AWA+ E+L EI++ T+FATH
Sbjct: 721 TFMVEMNETANILNHATLRSLVLLDEIGRGTATFDGLSIAWAVAEYLAVEIKSRTIFATH 780
Query: 778 FHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAE 837
+HEL LA +N VANY V+ + ++ L++V+PG D+S+GI
Sbjct: 781 YHELNELATIISN---------VANYQVT--VKELPDQIIFLHQVQPGGADKSYGIEAGR 829
Query: 838 FANFPESVVTLAREKAAELEDFTPSAV 864
A P V+ A++ ++E + A+
Sbjct: 830 LAGLPTVVIQRAKQVMGQIEKHSKIAM 856
>gi|82750895|ref|YP_416636.1| DNA mismatch repair protein MutS [Staphylococcus aureus RF122]
gi|123549102|sp|Q2YXR9.1|MUTS_STAAB RecName: Full=DNA mismatch repair protein MutS
gi|82656426|emb|CAI80846.1| DNA mismatch repair protein [Staphylococcus aureus RF122]
Length = 872
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 311/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|416839346|ref|ZP_11902740.1| DNA mismatch repair protein MutS [Staphylococcus aureus O11]
gi|416844731|ref|ZP_11905417.1| DNA mismatch repair protein MutS [Staphylococcus aureus O46]
gi|323441077|gb|EGA98784.1| DNA mismatch repair protein MutS [Staphylococcus aureus O11]
gi|323443946|gb|EGB01557.1| DNA mismatch repair protein MutS [Staphylococcus aureus O46]
Length = 872
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 311/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|422853249|ref|ZP_16899913.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK160]
gi|325697261|gb|EGD39147.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK160]
Length = 849
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 207/654 (31%), Positives = 336/654 (51%), Gaps = 58/654 (8%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ Y + ++++D A +L++ E+ K+ SL+ LM+ T TA MG R+L W+++PL+
Sbjct: 242 QHYEIKDFLQMDYATKASLDLTENARSGKKHGSLYWLMDETKTA-MGGRMLRSWIQRPLI 300
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
D I+ R ++V+ F+D R DL + LK + DIERL + + + +++L +
Sbjct: 301 DEARISQRQNVVEVFLDHFFERSDLTESLKGVYDIERLASRVSFGKTNPKDLLQLAATLG 360
Query: 403 RLPYIRSALQQY-EGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLE--NGE 459
+P I++ LQ + LI++ LDP+ L L+ +++ D L
Sbjct: 361 NVPQIKAILQGIGSPHLARLIED--LDPIPELA---------GLISSAISPDALHIITEG 409
Query: 460 YMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKA-------LKLDKGTQFG 512
+I + +D E+L++ L T +L V + LK+D + G
Sbjct: 410 NIIRTGFD----------ETLDQYRLVLRDGTGWIAELEVKERANSGISNLKIDYNKKDG 459
Query: 513 HVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV 572
+ F +T + + + F T K+ +F +L ++ + + E+ N + E+
Sbjct: 460 YYFHVTNSQLAHV----PSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEIF 515
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
R+ + A + + ++LA L+ +DVL SFA +A RP + +E R
Sbjct: 516 MRIREEAGKYIQRLQALAQTLAAVDVLQSFAAVAEQLHL--VRPVFTAER--RLQIEKGR 571
Query: 633 HPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
H VE ++IPN L+ ++ Q+ITGPNM GKST++RQ+ + ++MAQ+GS+VP
Sbjct: 572 HAVVEKVMGAQSYIPNSI-LLDQETNIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVPA 630
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
AS+ + D IF R+GA D + G STFM EM+E ++ A++RSLI+ DELGRGT+TY
Sbjct: 631 QSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTATY 690
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG LA AI EH+ A TLFATH+HELTAL EN+ E + N HV+
Sbjct: 691 DGMALAQAIIEHIHHYTGAKTLFATHYHELTAL--ENSLEH-------LENVHVATL--E 739
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKI 871
++T L+K+EPG D+S+GIHVA+ A PE ++ A + LE S +++
Sbjct: 740 KDGQVTFLHKIEPGPADKSYGIHVAKIAGLPEKLLERADSILSHLE----SQDTGLGSEL 795
Query: 872 EVGSKRKRISDPNDMSRGA-ARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
S++KR MS A + L E D+ + M E + V +K L
Sbjct: 796 PTKSRQKRSQVAEQMSLFAEGPENPVLTELRDLDIYNMTPLEVMAVVAELKKKL 849
>gi|417903438|ref|ZP_12547285.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21269]
gi|341850059|gb|EGS91192.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21269]
Length = 872
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 311/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|418917090|ref|ZP_13471049.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377750264|gb|EHT74202.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1267]
Length = 840
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 310/595 (52%), Gaps = 71/595 (11%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL+
Sbjct: 209 QYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIS 267
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 268 KEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 327
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLENGE 459
+P I++ L +L++ L+PL+ L D ++E S+ + + G
Sbjct: 328 IPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDGGL 376
Query: 460 YMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF 511
+ + + D L A KN E ++ ERQ + K+LK+ F
Sbjct: 377 FKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNKVF 423
Query: 512 GHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
G+ IT+ EP +RK +T + +F +LK+ D ++
Sbjct: 424 GYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAEDK 474
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
+ +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 475 AIELEYQLFVQLREEVKKYTERLQHQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKT 532
Query: 624 GDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILM 682
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +M
Sbjct: 533 LELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIM 589
Query: 683 AQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIID 742
AQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII D
Sbjct: 590 AQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFD 649
Query: 743 ELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVAN 802
E+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N
Sbjct: 650 EIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKN 700
Query: 803 YHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 701 VHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 753
>gi|384547538|ref|YP_005736791.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ED133]
gi|418563349|ref|ZP_13127790.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21262]
gi|298694587|gb|ADI97809.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ED133]
gi|371971474|gb|EHO88875.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21262]
Length = 872
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 309/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|71904476|ref|YP_281279.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS6180]
gi|90109860|sp|Q48QT6.1|MUTS_STRPM RecName: Full=DNA mismatch repair protein MutS
gi|71803571|gb|AAX72924.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS6180]
Length = 851
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 221/744 (29%), Positives = 368/744 (49%), Gaps = 84/744 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FDSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA +L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGSKRKR 879
E + S +IS +++E S ++
Sbjct: 785 ETQSRSTEIISVPSQVESSSAVRQ 808
>gi|409098138|ref|ZP_11218162.1| DNA mismatch repair protein MutS [Pedobacter agri PB92]
Length = 859
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 303/599 (50%), Gaps = 48/599 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I + D YM LD +R L ++ S D +LF +++ T T MG RLL W+ PL
Sbjct: 247 ISRIEEDRYMWLDRFTIRNLELVNSAND--NAVTLFDILDHTSTP-MGARLLQKWIIMPL 303
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ I RL +V FV + ++Q+ H+K+I DIERL+ + +R G +++V L ++
Sbjct: 304 KELKPIEERLGMVDFFVKNEEIQQEFLTHIKQIGDIERLISKVGLQRVGPRELVALKRAL 363
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
I + +++ + F LIK D LN +A+ E Q E +
Sbjct: 364 IHIEAVKNLAANSKNTF--LIKIA-----------DQLNPCLAIRERIERELQPEPPALL 410
Query: 462 -----ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
IS D L L+ + + + K+ A +P +LK+ FG+
Sbjct: 411 VKGNVISDGVDEDLDRLRKIAFGGKDYLVQIQKREAEATGIP---SLKISFNNVFGYYLE 467
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI 576
+T + K+ + +I +T + ++ +LK+ +Q E+ + + L N ++
Sbjct: 468 VTHTHKDKVPEG----WIRKQTLVNAERYITPELKEYEEQILGAEEKIQAIEIRLYNELM 523
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
+ + + A ++++LD LL FA LA Y +P +N V DI +G RHP +
Sbjct: 524 YETAGYIKPIQLNAFLIAQLDCLLCFAQLAEK--NHYVKPTVNKDKVLDI--KGGRHPVI 579
Query: 637 EAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
E Q V +I ND L +ITGPNM GKS +RQ + +LMAQ+GSFVP A
Sbjct: 580 EKQLPVGQEYITNDVYLDSDSQQIIMITGPNMAGKSAILRQTALIVLMAQMGSFVPAKAA 639
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
+ + D IF RVGA D G STFM EM ETASIL +D SLI++DE+GRGTSTYDG
Sbjct: 640 DVGLVDKIFTRVGASDNISSGESTFMVEMNETASILNNISDNSLILLDEIGRGTSTYDGI 699
Query: 755 GLAWAICEHLVEEI--RAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
+AWAI E L + R TLFATH+HEL LA NT M + N++VS +
Sbjct: 700 SIAWAIAEFLHQHPTSRPKTLFATHYHELNELA-------NT--MPRIKNFNVS--VKEM 748
Query: 813 SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE-DFTPSAVISDDAK 870
+ K+ L K+ PG + SFGIHVA+ A P ++ A E +LE D T I D K
Sbjct: 749 TNKVIFLRKLVPGGSEHSFGIHVAKMAGMPPKLIGRANEILKKLEIDRTEGQSIKDSIK 807
>gi|229031399|ref|ZP_04187400.1| DNA mismatch repair protein mutS [Bacillus cereus AH1271]
gi|228729894|gb|EEL80873.1| DNA mismatch repair protein mutS [Bacillus cereus AH1271]
Length = 886
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 333/615 (54%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAIGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ ++ RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKEKVEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + +++ + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGVKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + +P + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKPVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E +LE
Sbjct: 770 DSLIARAKEVLTQLE 784
>gi|306826471|ref|ZP_07459782.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC
10782]
gi|304431330|gb|EFM34328.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC
10782]
Length = 851
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 222/740 (30%), Positives = 366/740 (49%), Gaps = 84/740 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F+S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FNSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTTSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N D I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FN--DNHMITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGS 875
E + S +IS +K+E S
Sbjct: 785 ETQSRSTEIISVPSKVEPSS 804
>gi|172087862|emb|CAQ35087.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087874|emb|CAQ35093.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
Length = 872
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 199/597 (33%), Positives = 311/597 (52%), Gaps = 71/597 (11%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPK----IRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVL 561
FG+ IT+ EP +RK +T + +F +LK+ D
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRK---------QTLSNAERFITDELKEKEDIILGAE 504
Query: 562 EEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPP 621
++ + +L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 505 DKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSEN 562
Query: 622 DVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNI 680
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 563 KTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIIS 619
Query: 681 LMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLII 740
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII
Sbjct: 620 IMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLII 679
Query: 741 IDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + +
Sbjct: 680 FDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSL 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 731 KNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|386728982|ref|YP_006195365.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
71193]
gi|387602573|ref|YP_005734094.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST398]
gi|404478637|ref|YP_006710067.1| DNA mismatch repair protein MutS [Staphylococcus aureus 08BA02176]
gi|418310539|ref|ZP_12922078.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21331]
gi|418980637|ref|ZP_13528413.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|283470511|emb|CAQ49722.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ST398]
gi|365236591|gb|EHM77478.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21331]
gi|379991612|gb|EIA13081.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|384230275|gb|AFH69522.1| MutS [Staphylococcus aureus subsp. aureus 71193]
gi|404440126|gb|AFR73319.1| DNA mismatch repair protein MutS [Staphylococcus aureus 08BA02176]
Length = 872
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 309/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|422343285|ref|ZP_16424213.1| DNA mismatch repair protein MutS [Selenomonas noxia F0398]
gi|355378592|gb|EHG25772.1| DNA mismatch repair protein MutS [Selenomonas noxia F0398]
Length = 866
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 228/690 (33%), Positives = 337/690 (48%), Gaps = 66/690 (9%)
Query: 257 APGALGALLSYAE--LLSDESNYGNYYIRKYSLDSY--MRLDSAAMRALNVLESKTDANK 312
A A+ ALL Y +++D S R LD+ M+LD+ +R L + S D +K
Sbjct: 228 AQTAIAALLRYLHDTVMADLSQIN----RLAFLDAAGTMQLDTYTLRNLEITRSLRDGSK 283
Query: 313 NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLK 372
+LF +++ T T MG RLL WL+ PLL + I+ARLD V + +LR LR+ L+
Sbjct: 284 KNTLFDVLDFTRTP-MGTRLLKSWLEHPLLTPHRIDARLDAVAELAEKPSLRSGLREALR 342
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ----FSSLIKERYLD 428
I D ERL+ +E A + +V L S LP +R+AL E + F+ I
Sbjct: 343 SIYDFERLLTRIETLAANARDLVALRVSLAALPMVRTALGTAESRLLTHFAGAI------ 396
Query: 429 PLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
LT D+ + + + E G +I YD L L + + +
Sbjct: 397 ----LTFDELRDVLERAIVDEPGISVREGG--IIREGYDAALDDLHRFSHDSKALLQEME 450
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNT 548
++ + K LK+ FG+ + R ++ +I +T + +F
Sbjct: 451 ERERERTGI---KTLKIGYNKVFGYYIEVRHSG----RDQVPADYIRKQTLANTERFITE 503
Query: 549 KLKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+LK LG Q + EY + EL RV + V + +++A +D L S A
Sbjct: 504 ELKDFEAKILGAQEKITALEY-HLFTELRERVREQLVPIQNVARAIA----RVDALQSLA 558
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE--AQDWVNFIPNDCKLIRGKSWFQII 661
+ A++ Y RP I G+II+ RHP VE Q + F+PND L G + +I
Sbjct: 559 EAAAAYR--YVRPKICTAADGEIIIRDGRHPLVERILQREI-FVPNDTHLSHGGAETMLI 615
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST++RQV + LMAQVGSFVP A I+ D IF R+GA D + G STFM
Sbjct: 616 TGPNMAGKSTYMRQVALLTLMAQVGSFVPARSAQIAPVDRIFTRIGASDDLVSGQSTFMV 675
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EM E A IL+ AT SL+I+DE+GRGTST+DG +A A+ E + I A TLFATH+HEL
Sbjct: 676 EMNEVAQILREATRDSLVILDEIGRGTSTFDGMSIARAVVEFIDTRIHAKTLFATHYHEL 735
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T +A E + NY ++ + +++ L ++ PGA D+S+GIHVA A
Sbjct: 736 TEMAGER-----------IRNYCIA--VREKGKRVAFLRRIIPGAADKSYGIHVARLAGL 782
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFS 901
P V E+A E+ + A E + R+ M+ + A L E
Sbjct: 783 PPRVT----ERAEEILHALEQKAAATAAAEEETAARQEPEQTEGMA--SLFADGTLDELR 836
Query: 902 DMPLETMDLKEALERVKRMKDDLEKDAGDC 931
+ + TM EAL + R+++ K+AG+
Sbjct: 837 ALDIMTMTPLEALNTLYRLQEQARKEAGEA 866
>gi|429761467|ref|ZP_19293892.1| DNA mismatch repair protein MutS [Anaerostipes hadrus DSM 3319]
gi|429183720|gb|EKY24761.1| DNA mismatch repair protein MutS [Anaerostipes hadrus DSM 3319]
Length = 875
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 217/680 (31%), Positives = 342/680 (50%), Gaps = 56/680 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL Y S +I Y +M +DS++ R L + E+ D K SL +
Sbjct: 239 ATGALLGYLHETQKSSLDHLMHIEAYETSEFMIIDSSSRRNLELCETLRDKQKKGSLLWV 298
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L ++QPL+D +I R D + D T +R++LR++L I D+ER
Sbjct: 299 LDKTKTA-MGARMLRNMVEQPLVDKKKIEERYDAITTLTDQTIVREELREYLNPIYDLER 357
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
LM + + A + ++ S LP I++ L++ + S ++E LDPLE + +
Sbjct: 358 LMTKVSYKTANPRDMIAFKTSLELLPAIKTVLEECKDPLLSGLRED-LDPLEDIHN---- 412
Query: 440 NKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L+E S+ L E G +I + + LK + ++ + L ++
Sbjct: 413 -----LLEDSIIEEPPLAIKEGG--IIKEGFKEDIDKLKRAKTEGKQWLMELEEREREKT 465
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K LK+ FG+ +T + + +I +T + ++T +L +L D
Sbjct: 466 GI---KNLKIKFNKVFGYYLDVTNS----YKDLVPDYYIRKQTLANSERYTTEELNQLAD 518
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
+ + E + +T E A +++++D L S A +A + R
Sbjct: 519 TILGSEDRLYALEYETYVMIRETLAGEMERISRTANVIAQIDALASLAYVAER--NHFVR 576
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
P +N G I ++ RHP VE Q N FI ND L K+ IITGPNM GKST++
Sbjct: 577 PKLNVR--GTIDIKDGRHPVVE-QVIPNDMFISNDTYLDNKKNRVAIITGPNMAGKSTYM 633
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQV + +LMAQ+GSFVP +A+I + D IF RVGA D G STFM EM E A+IL+ A
Sbjct: 634 RQVALIVLMAQIGSFVPAAKANIGIVDRIFTRVGASDDLASGQSTFMVEMSEVANILRNA 693
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANE 791
T SL+I+DE+GRGTST+DG +AWA+ E++ + A TLFATH+HELT L
Sbjct: 694 TKNSLLILDEIGRGTSTFDGLSIAWAVVEYISNSKLLGAKTLFATHYHELTELE------ 747
Query: 792 FNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
++ V NY ++ + + L K+ G D+S+G+ VA+ A P++V+ A+E
Sbjct: 748 ---GKIDSVHNYCIA--VKEQGDDIVFLRKIVKGGADKSYGVQVAKLAGVPDAVINRAKE 802
Query: 852 KAAELEDFTPSAVISDDAKIEVGSKRK----RISDPNDMSRGAARAHQFLKEFSDMPLET 907
A ELE+ ++ D + G ++ R SD M H F+ E + L
Sbjct: 803 IARELEEHDLTSGAKD--IMPYGEAQQLSFFRESDEPTME------HPFMAELREKDLSD 854
Query: 908 MDLKEALERVKRMKDDLEKD 927
M EAL + +++ L+ +
Sbjct: 855 MTPLEALNYLYVLQEKLKNE 874
>gi|387780403|ref|YP_005755201.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177505|emb|CCC87974.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus LGA251]
Length = 872
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 309/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIVRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERIQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|417656597|ref|ZP_12306280.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU028]
gi|329736258|gb|EGG72530.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
VCU028]
Length = 602
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 298/551 (54%), Gaps = 61/551 (11%)
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
+ LM+ T T MG R L W+ +PL++ +IN RL+IV+ F+D R LR HL ++
Sbjct: 1 MLWLMDETKTP-MGARRLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVY 59
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTD 435
DIERL+ + + +++L S +P+I++ L + Q ++ KE L+PL+ L
Sbjct: 60 DIERLVGRVSYGNVNARDLIQLKHSISEIPHIKALLNELGAQTTTQFKE--LEPLDDL-- 115
Query: 436 DDHLNKFIALVETSV---------DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHS 486
+ ++E S+ D +NG ++ D L A KN + L
Sbjct: 116 -------LQILEESLVEEPPISIKDGGLFKNG---FNAQLDEYLEASKNGKTWLAELQAK 165
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
++T K+LK+ FG+ IT+ + + + +T + +F
Sbjct: 166 ERERTGI-------KSLKISFNKVFGYFIEITRANLNNFQPE-AFGYNRKQTLSNAERFI 217
Query: 547 NTKLKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
+LK+ LG + + V EY EL ++ + T++E + A ++SELD L S
Sbjct: 218 TDELKEKEDIILGAEDKAVELEY-----ELFVKLREHIKTYTERLQKQAKIISELDCLQS 272
Query: 602 FADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQI 660
FA++A Y +P + V + LE SRHP VE D+ +++PNDC L +++ +
Sbjct: 273 FAEIAQKYN--YVKPTFSDDKV--LHLENSRHPVVERVMDYNDYVPNDCHL-DDETFIYL 327
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQV + +MAQ+G++VPCD A++ + D IF R+GA D + G STFM
Sbjct: 328 ITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFM 387
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHE 780
EMLE L AT+ SLII DE+GRGTSTYDG LA A+ E++ + A TLF+TH+HE
Sbjct: 388 VEMLEAQKALTYATENSLIIFDEIGRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHE 447
Query: 781 LTALAHENANEFNTKQMVG-VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
LT+L QM+ + N HV+A + +L L+KV+ GA D S+GI VA+ A
Sbjct: 448 LTSL----------DQMLKCLKNVHVAA--NEYQGELIFLHKVKDGAVDDSYGIQVAKLA 495
Query: 840 NFPESVVTLAR 850
+ P V+ A+
Sbjct: 496 DLPNEVIDRAQ 506
>gi|302874906|ref|YP_003843539.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
gi|307690474|ref|ZP_07632920.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
gi|302577763|gb|ADL51775.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
Length = 901
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 312/574 (54%), Gaps = 41/574 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y ++ ++ +D + L + E++ D K SL ++++T TA MG R L W+ QPL++
Sbjct: 254 YEIEDFLSIDINTRKNLELTETQRDKTKKGSLLWVLDKTSTA-MGARELRKWIDQPLINK 312
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I RL+ V V + +L+++L+ LK I DIERL+ + + ++++ + S ++
Sbjct: 313 NAIELRLEAVAELVSNLSLQEELKVLLKDIYDIERLVGKVSSKSVNAKELLSIKSSISKI 372
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P I++ L+Q SS ++E Y + L+ L+D + L +E S+D L+ G +
Sbjct: 373 PAIKTLLKQCT---SSYLQEIY-NNLDELSDIEEL------LEKSIDESPAITLKEGN-L 421
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I Y++ + LK ++ + + L + + K+LK+ FG+ +TK
Sbjct: 422 IKEGYNSEIDQLKVAKKDGKLWLSELEAREKETTGI---KSLKVSFNKVFGYYIEVTKTN 478
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
+ + ++I +T + ++ +LKK+ D E+ + + ++ V + +
Sbjct: 479 LNMVPEH---RYIRKQTLANCERYITDELKKMEDIILGAEEKLISLEYDVFVEVRELVLK 535
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII-LEGSRHPCVEAQ- 639
+ A +++ +D L S A +A YTRP I DV II ++ RHP VE
Sbjct: 536 EVLRMQQSARLIATIDCLNSLAIVA--LENNYTRPAI---DVSGIINIKEGRHPVVEKLL 590
Query: 640 DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
NFI N L R ++ IITGPNMGGKST++RQ + +MAQ+GSFVP + A+I +
Sbjct: 591 PTGNFISNSISLDREENQLLIITGPNMGGKSTYMRQCALITIMAQIGSFVPAESATIGIC 650
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D +F R+GA D G STFM EM E A+IL AT+ SL+++DE+GRGTSTYDG +AWA
Sbjct: 651 DKVFTRIGASDDLAGGKSTFMVEMWEVANILNNATNNSLVLLDEVGRGTSTYDGLSIAWA 710
Query: 760 ICEHLV--EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLT 817
+ E L + ++ TLFATH+HELT L E + GV NY V + ++
Sbjct: 711 VIEFLTTNKNVKCKTLFATHYHELTKLEAEFS---------GVKNYSVG--VKKIGEEII 759
Query: 818 MLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
L+K+ GA D+S+GI VA A P++V+ ++E
Sbjct: 760 FLHKIVKGAADESYGIEVARLAGLPQAVLDRSKE 793
>gi|289550910|ref|YP_003471814.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
HKU09-01]
gi|385784538|ref|YP_005760711.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
N920143]
gi|418414211|ref|ZP_12987427.1| DNA mismatch repair protein mutS [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180442|gb|ADC87687.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
HKU09-01]
gi|339894794|emb|CCB54090.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
N920143]
gi|410877849|gb|EKS25741.1| DNA mismatch repair protein mutS [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 869
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 305/576 (52%), Gaps = 43/576 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+++Y+ +M++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VKEYAAIDFMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ EI RL+ V ++ R LR +L ++ D+ERL+ + + +++L S
Sbjct: 298 IQQQEIEHRLNAVDQLINAFIERDTLRGYLNQVYDVERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV-DLDQLENGEY 460
+P+I+ L + + FS + L+PL+ L D N + SV D + G
Sbjct: 358 SEIPHIKQLLLEMDQTFSQQFDK--LEPLDDLLDVLE-NSIVEEPPISVKDGGLFKRG-- 412
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+ D L A +N + L Q+ + ++ K+LK+ FG+ IT+
Sbjct: 413 -FNQQLDEYLDASQNGKSWLA-QLQAREREKTGI------KSLKISFNKVFGYFIEITRA 464
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRV 575
+ +T + +F +LK+ LG + + V EY +L ++
Sbjct: 465 NLQGFNPT-DYGYYRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----QLFVKL 518
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ T++E + A ++SELD L SFA++A YTRP + + LE SRHP
Sbjct: 519 REHIKTYTEKLQQQAKIISELDCLQSFAEIAQRYN--YTRPQFSENKT--LNLENSRHPV 574
Query: 636 VE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE D +++PNDC L+ +++ +ITGPNM GKST++RQV + +MAQ+GSFVPCD+A
Sbjct: 575 VERVMDHNDYVPNDC-LLNKENFIYLITGPNMSGKSTYMRQVAIISIMAQMGSFVPCDKA 633
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
++ + D IF R+GA D + G STFM EMLE L AT SLII DE+GRGTSTYDG
Sbjct: 634 TLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATADSLIIFDEIGRGTSTYDGL 693
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
LA ++ E++ + A TLF+TH+HELT L E + + N HV+A D
Sbjct: 694 ALAQSMIEYVAKTSHAKTLFSTHYHELTDLDQE---------LSCLKNVHVAA--DEYQG 742
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 743 ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIERAQ 778
>gi|435848119|ref|YP_007310369.1| DNA mismatch repair protein MutS [Natronococcus occultus SP4]
gi|433674387|gb|AGB38579.1| DNA mismatch repair protein MutS [Natronococcus occultus SP4]
Length = 895
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 214/644 (33%), Positives = 318/644 (49%), Gaps = 72/644 (11%)
Query: 249 DLVSGFEIAPGAL----------GALLSYAELL-------SDESNYGN--------YYIR 283
D VSG+ P AL GALL YAE +DE+ G ++
Sbjct: 223 DTVSGYFGEPDALLAADAEIRACGALLEYAEYARGGAESDADENADGTERSRLEYLTHLT 282
Query: 284 KYSLDSYMRLDSAAMRALNVLESKT-DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+Y Y+ LD+ A+R+L + E + A+++ +L G+++ T +A +G R L WL++PLL
Sbjct: 283 RYDPREYLLLDAVALRSLELFEPRAVRAHEDATLVGVLDETASA-LGGRALRDWLRRPLL 341
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
+ + I ARLD V+ R+ L + L+ + D+ERL+ + + RA + + L +
Sbjct: 342 EPDRIEARLDAVEELTGAVRRREQLYELLRDVYDLERLIGRISRERANARDLRSLRDTLA 401
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPL---ESLTDDDHLNKFIALVETSVDLDQLENGE 459
+P IR L + + E LDPL L DD V + ++ E G
Sbjct: 402 VVPEIREVLADADCDRLQRLHEE-LDPLADVRELIDD--------AVVSDPPIEITEGG- 451
Query: 460 YMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITK 519
+I+ YD L L+ ++ I L + + +LK+ + G+ +T
Sbjct: 452 -IIAEEYDADLDELRGTARDGKQWIDDLEARERERTGI---DSLKVGYNSVHGYYIEVTN 507
Query: 520 KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
P + + + +T K+ +F +LK+ D+ E + EL V
Sbjct: 508 ---PNL-DSVPENYQRRQTLKNSERFVTPELKEREDEIVGAEERADELEYELFCEVRSAV 563
Query: 580 VTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVG-DIILEGSRHPCVEA 638
E ++LA L+ +D L+S + +A+ Y RP+I D +I +EG RHP VE
Sbjct: 564 ADEVERVQALADALATVDALVSLSTVAAQYD--YCRPEIRERDADLEIDIEGGRHPVVE- 620
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
+ +F+PN L + +ITGPNM GKST++RQV +L+AQVGSFVP A IS
Sbjct: 621 RTQESFVPNGADLSPDRR-LAVITGPNMSGKSTYMRQVAQIVLLAQVGSFVPAKSARISP 679
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF RVGA D G STFM EM E A+IL+ A +RSL+++DE+GRGTST DG +A
Sbjct: 680 VDRIFTRVGASDDIAGGRSTFMVEMDELATILREADERSLVLLDEVGRGTSTADGLAIAQ 739
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENAN----EFNTKQMVGVANYHVSAHIDSTSR 814
AI EHL +E+ A TLFATH H LT LA E F +Q G +H
Sbjct: 740 AITEHLHDEVGATTLFATHHHPLTELAEELPAAFTLHFEVEQREGEVVFH---------- 789
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
+++ PG+ S+G+ VA A PE VV +RE AE D
Sbjct: 790 -----HEIAPGSATGSYGVEVATAAGVPEDVVERSRELVAENAD 828
>gi|49483458|ref|YP_040682.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257425349|ref|ZP_05601774.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428010|ref|ZP_05604408.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430643|ref|ZP_05607025.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433403|ref|ZP_05609761.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus E1410]
gi|257436245|ref|ZP_05612292.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M876]
gi|282903850|ref|ZP_06311738.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|282905613|ref|ZP_06313468.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908589|ref|ZP_06316419.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910867|ref|ZP_06318670.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914072|ref|ZP_06321859.1| DNA mismatch repair protein HexA [Staphylococcus aureus subsp.
aureus M899]
gi|282918994|ref|ZP_06326729.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C427]
gi|282924117|ref|ZP_06331793.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C101]
gi|283958038|ref|ZP_06375489.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293501104|ref|ZP_06666955.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510066|ref|ZP_06668774.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M809]
gi|293526652|ref|ZP_06671337.1| DNA mismatch repair protein HexA [Staphylococcus aureus subsp.
aureus M1015]
gi|295427782|ref|ZP_06820414.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297591260|ref|ZP_06949898.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|384867819|ref|YP_005748015.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
gi|415683884|ref|ZP_11449086.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|417887010|ref|ZP_12531149.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21195]
gi|418566586|ref|ZP_13130959.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21264]
gi|418582129|ref|ZP_13146207.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597727|ref|ZP_13161249.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21342]
gi|418603127|ref|ZP_13166518.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21345]
gi|418891928|ref|ZP_13446043.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418897833|ref|ZP_13451903.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418900703|ref|ZP_13454760.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418909006|ref|ZP_13463009.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG149]
gi|418922877|ref|ZP_13476794.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418982208|ref|ZP_13529916.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418985877|ref|ZP_13533563.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1500]
gi|56749234|sp|Q6GHE0.1|MUTS_STAAR RecName: Full=DNA mismatch repair protein MutS
gi|49241587|emb|CAG40273.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MRSA252]
gi|172087856|emb|CAQ35084.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087858|emb|CAQ35085.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087878|emb|CAQ35095.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|172087882|emb|CAQ35097.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus]
gi|257271806|gb|EEV03944.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274851|gb|EEV06338.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278771|gb|EEV09390.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281496|gb|EEV11633.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus E1410]
gi|257284527|gb|EEV14647.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M876]
gi|282314089|gb|EFB44481.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C101]
gi|282316804|gb|EFB47178.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C427]
gi|282322140|gb|EFB52464.1| DNA mismatch repair protein HexA [Staphylococcus aureus subsp.
aureus M899]
gi|282325472|gb|EFB55781.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282327651|gb|EFB57934.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282330905|gb|EFB60419.1| DNA mismatch repair protein mutS [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595468|gb|EFC00432.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|283790187|gb|EFC29004.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290920724|gb|EFD97787.1| DNA mismatch repair protein HexA [Staphylococcus aureus subsp.
aureus M1015]
gi|291096109|gb|EFE26370.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467010|gb|EFF09528.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M809]
gi|295128140|gb|EFG57774.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297576146|gb|EFH94862.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|312438324|gb|ADQ77395.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
gi|315194182|gb|EFU24575.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|341858432|gb|EGS99222.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21195]
gi|371969856|gb|EHO87294.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21264]
gi|374393789|gb|EHQ65093.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21342]
gi|374393856|gb|EHQ65159.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21345]
gi|377703171|gb|EHT27487.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704489|gb|EHT28798.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705695|gb|EHT29999.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710539|gb|EHT34777.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377731260|gb|EHT55317.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377736200|gb|EHT60230.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377754044|gb|EHT77954.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIG149]
gi|377760868|gb|EHT84744.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 872
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 308/591 (52%), Gaps = 63/591 (10%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL+
Sbjct: 241 QYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPLIS 299
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 300 KEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISE 359
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLENGE 459
+P I++ L +L++ L+PL+ L D ++E S+ + + G
Sbjct: 360 IPNIKALLNSMNQ--DTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDGGL 408
Query: 460 YMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF 511
+ + + D L A KN E ++ ERQ + K+LK+ F
Sbjct: 409 FKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNKVF 455
Query: 512 GHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNC 567
G+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 456 GYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAIEL 510
Query: 568 QKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDII 627
+ +L ++ + ++E + A ++SELD L SFA++A YTRP + +++
Sbjct: 511 EYQLFVQLREEVKKYTERLQHQAKIISELDCLQSFAEIAQKYN--YTRPSFSENKTLELV 568
Query: 628 LEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ+G
Sbjct: 569 --ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQMG 625
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+GR
Sbjct: 626 AYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGR 685
Query: 747 GTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVS 806
GTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N HV+
Sbjct: 686 GTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVHVA 736
Query: 807 AHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 737 A--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|325291779|ref|YP_004277643.1| DNA mismatch repair protein MutS [Agrobacterium sp. H13-3]
gi|325059632|gb|ADY63323.1| DNA mismatch repair protein MutS [Agrobacterium sp. H13-3]
Length = 904
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 214/659 (32%), Positives = 322/659 (48%), Gaps = 52/659 (7%)
Query: 284 KYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLD 343
+ S S + +D A L ++++ + ++ SL +NRT T G G RLL L PL D
Sbjct: 281 RESAASTLFIDPATRANLELVKTLS-GERDGSLLHALNRTVTGG-GARLLAERLMSPLTD 338
Query: 344 VNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIR 403
+NARLD V +DD +L LR LK+++D+ R + L R G + + + Q
Sbjct: 339 PERVNARLDAVAYLIDDVSLCDGLRDALKQVADMPRALSRLALERGGPRDLGAIRQGLAS 398
Query: 404 LPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMIS 463
I + L Q L +E + L + + + DL L+ +
Sbjct: 399 AERIAAILDQ-----GLLPQELAAALADLKALPGGLEAMLGSM-LADDLPLLKRDGGFLR 452
Query: 464 SSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEP 523
+ L ++ ++ R I L Q A + + K+LK+ G+ +T
Sbjct: 453 EGANPELDDVRALRDQSRRVIAGLQLQYAEETGI---KSLKIKHNNVLGYFIEVTAGNAD 509
Query: 524 KIRK--KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
+ + +FI +T ++FT T+L L + E + E R+++ V
Sbjct: 510 VMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEAFERMVEAVVR 569
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA--- 638
+E K+ A L+ +DV S A LA+ Y RP ++ + G RHP VE
Sbjct: 570 QAEAIKAGALALAVIDVASSLAYLATE--QAYCRPIVDASMT--FAITGGRHPVVEQALR 625
Query: 639 -QDWVNFIPNDCKLI------RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
Q FI N+C L G W ++TGPNMGGKSTF+RQ + ++AQ+GSFVP
Sbjct: 626 RQSAGPFIANNCDLSAAEGGKNGAIW--LLTGPNMGGKSTFLRQNALIAILAQIGSFVPA 683
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
+ A I + D +F+RVGA D RG STFM EM+ETA+IL ATDRSL+I+DE+GRGT+T+
Sbjct: 684 EAAHIGIVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGTATF 743
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG +AWA EHL E R LFATHFHELT L+ E + M +
Sbjct: 744 DGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLS-EKLGRLSNATM----------RVKE 792
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---TPSAVISDD 868
+ L++V PGA D+S+GI VA A P SVV ARE +LED P++ + DD
Sbjct: 793 WEGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDD 852
Query: 869 AKI-EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEK 926
+ ++ +R+ G ++ + LK F+ + M +EAL+ + +K +L K
Sbjct: 853 LPLFQIAVRREETRKA-----GPSKVEEALKGFNP---DEMTPREALDALYALKKELGK 903
>gi|255994617|ref|ZP_05427752.1| DNA mismatch repair protein MutS [Eubacterium saphenum ATCC 49989]
gi|255993330|gb|EEU03419.1| DNA mismatch repair protein MutS [Eubacterium saphenum ATCC 49989]
Length = 901
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 249/861 (28%), Positives = 424/861 (49%), Gaps = 99/861 (11%)
Query: 30 NDTRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTG------------SDALSS 77
N+ + FF D+Y E+A ++K T TA R G G +DA +
Sbjct: 20 NNPSCILFFRLGDFYEMFFEDAELVSKELQLTLTA-RMSGNGEKAPMCGVPYHAADAYIA 78
Query: 78 VSVSKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSYEDVLFANNEMQD 137
V K I + T E G +V+ TPG + E +L A +
Sbjct: 79 RLVKKGYKIAICEQM------QTPEESNGKLVEREIVRVITPGTVLD-EKILRAGS---- 127
Query: 138 TPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT 197
+ I+++ N N T GL Y D++ L + E S ++E+ +V + E ++PT
Sbjct: 128 SNYILSITQN---NNNTFGLAYSDISTGELSVLEVYSTS---DLENEVVTINPVEIIMPT 181
Query: 198 EAVKSSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIA 257
A+K E + +A + G ++ +K ++ + + S ++ L+ G I+
Sbjct: 182 -ALK--EVSGVVEAAS--GFYISYLDTDYYKQSNINEAI-----FSQFGIKSLL-GIGIS 230
Query: 258 P-----GALGALLSYAELLSDESNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTDAN 311
ALGALL Y + S+ G+ + + + +YM LD + MR+L ++E +A+
Sbjct: 231 EDAAYVNALGALLIYIRR-TQRSSLGHIVEVHQETPSNYMSLDKSTMRSLELIEPLYEAD 289
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
N+SL ++ RT T+ MG RLL WLK+PL ++ I R D ++ FV+ + +R+ L
Sbjct: 290 GNYSLVDILGRTKTS-MGARLLRSWLKRPLKNLQNITKRHDAIEKFVEHKEDIKTIRKAL 348
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQ----QYEGQFSSLIKERYL 427
I D +R+ + RA + ++ + S +R+P ++S L Q + Q S+L+ E Y
Sbjct: 349 GNIYDFKRICGRIGAGRANARDLISMKLSLMRIPELKSLLTNVNTQGDKQASALLNELY- 407
Query: 428 DPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSL 487
D ++ D L + + E + + + E +I +D L ++K + I L
Sbjct: 408 DRIDDFEDVSSLIENALVDEPPITITEGE----IIKDGFDEELDSMKRAIADGKAWIAGL 463
Query: 488 HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTN 547
+ KALK+ FG+ + + + ++I +T + ++
Sbjct: 464 ENTERERTGI---KALKVGYNKVFGYYLEVRNAS----KDLVPDEYIRKQTLVNAERYIT 516
Query: 548 TKLKK-----LGDQYQKVLEEY---KNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVL 599
KLK+ LG Q + EY +N + + R+++ T A ++E+DVL
Sbjct: 517 PKLKEVEAEVLGAQNKINKREYDCFQNIRDMISERILELMHT--------ADAIAEIDVL 568
Query: 600 LSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA-QDWVNFIPNDCKLIRGKSWF 658
A +A YT+P+++ D DI + RHP VEA ++ F N+ + +
Sbjct: 569 AGLAKVA--IDNGYTKPNMH--DGKDIEVVQGRHPVVEAVMEYNQFTGNNFSIDADEKSL 624
Query: 659 QIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVST 718
+ITGPNM GKST++RQ + +LM+Q+GSF+P + A+I + D IF R+GAGD +G ST
Sbjct: 625 LLITGPNMAGKSTYMRQNALIVLMSQIGSFIPAESANIGIVDRIFTRIGAGDNLAKGQST 684
Query: 719 FMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFAT 776
F EM E A ILK ATD+S +I+DE+GRGTSTYDG +A+A+C+ L++ + TLFAT
Sbjct: 685 FFLEMSELAYILKNATDKSFVILDEIGRGTSTYDGLSIAYALCKFLLQGDNPKVRTLFAT 744
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HEL+ L + G+ N ++ + K+ +K++ G+ ++S+G+ VA
Sbjct: 745 HYHELSELEG---------VLPGLLNLTIAVF--EKNGKVIFSHKIKKGSAEKSYGVDVA 793
Query: 837 EFANFPESVVTLAREKAAELE 857
+ A P+ ++ A++K ELE
Sbjct: 794 KLAGVPDELLRSAKQKLKELE 814
>gi|383480785|ref|YP_005389679.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS15252]
gi|383494765|ref|YP_005412441.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS1882]
gi|378928775|gb|AFC66981.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS15252]
gi|378930492|gb|AFC68909.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS1882]
Length = 851
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 221/740 (29%), Positives = 366/740 (49%), Gaps = 84/740 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F+S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FNSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTTSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGS 875
E + S +IS +++E S
Sbjct: 785 ETQSRSTEIISVPSQVESSS 804
>gi|302024621|ref|ZP_07249832.1| DNA mismatch repair protein MutS [Streptococcus suis 05HAS68]
gi|330833728|ref|YP_004402553.1| DNA mismatch repair protein MutS [Streptococcus suis ST3]
gi|329307951|gb|AEB82367.1| DNA mismatch repair protein MutS [Streptococcus suis ST3]
Length = 846
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 215/682 (31%), Positives = 348/682 (51%), Gaps = 79/682 (11%)
Query: 202 SSECKTLRDALTR---CGVMLTERKKTEFKTR-DLVQDLDRLVRGSVEPVRDLVSGFEIA 257
+S C +R+ R G L+E ++ F + +L+ + V V+ + + ++ E A
Sbjct: 159 TSLCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA 218
Query: 258 PGALGALLSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
A G LLSY + D S+ + Y + Y+++D A +L++LE+ K+ S
Sbjct: 219 --AAGKLLSYLHRTQMRDLSHLQK--VVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGS 274
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L+ L++ T TA MG RLL W+ +PL+D+ I R IVQ F+D R DL + LK +
Sbjct: 275 LYWLLDETKTA-MGMRLLRTWIDRPLIDLKRIENRQAIVQVFLDYFFERSDLVEALKGVY 333
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLT 434
DIERL + + + +++L Q+ +P I++ LQQ E +L+ LDP+ L
Sbjct: 334 DIERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAG--LDPIPELH 391
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALK----------NEQESLE 481
AL+ +++D + + +G +I + +D L + E E+ E
Sbjct: 392 ---------ALISSAIDPEAQGTITDGN-IIRTGFDETLDQYRLVIREGAGWIAEIEAKE 441
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
R+ ++ LK+D + G+ F +T + F T K+
Sbjct: 442 REASGINN-------------LKIDYNKKDGYYFHVTNSNLGNV----PDHFFRKATLKN 484
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
++ +L K+ Q + ++ N + E+ R+ Q + + LA ++ +DVL +
Sbjct: 485 SERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQA 544
Query: 602 FADLASS----CPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKS 656
FA +A CP +T D ++ ++ RH VE +IPN L +
Sbjct: 545 FAVVAEQQHLVCPR-FT-------DQRELTIDRGRHAVVEKVMGKQTYIPNSIHL-NTDT 595
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
Q+ITGPNM GKST++RQ+ V ++MAQ+GS+VP D+A + + D IF R+GA D + G
Sbjct: 596 HMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRIGAADDLVSGQ 655
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM+E ++ ATDRSLI+ DELGRGT+TYDG LA +I E++ ++I A TLFAT
Sbjct: 656 STFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHDKIGAKTLFAT 715
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L ++ + + N HVS ++T L+K+ G D+S+GIHVA
Sbjct: 716 HYHELTDL---------SQTLEHLENVHVSTL--EKDGQVTFLHKIAQGPADKSYGIHVA 764
Query: 837 EFANFPESVVTLAREKAAELED 858
+ A PE ++ A LE+
Sbjct: 765 KIAGMPEELLQRADRILQTLEN 786
>gi|359405902|ref|ZP_09198629.1| DNA mismatch repair protein MutS [Prevotella stercorea DSM 18206]
gi|357557252|gb|EHJ38804.1| DNA mismatch repair protein MutS [Prevotella stercorea DSM 18206]
Length = 878
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 211/642 (32%), Positives = 318/642 (49%), Gaps = 59/642 (9%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTD 309
V + A GA+L Y E+ + + G+ + + D Y+RLD + +L +L+S D
Sbjct: 231 VDHLHLGVTAAGAILQYLEM-TQHTQIGHITSLARIDADRYVRLDRFTIHSLELLQSMQD 289
Query: 310 ANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQ 369
SL +++RTCT MG RLL W PL DV IN RLD+V+ F RQ + +
Sbjct: 290 --DGVSLLSVIDRTCTP-MGGRLLRRWTIFPLRDVATINKRLDVVETFFRKPDFRQTVDE 346
Query: 370 HLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP 429
HL RI DIER++ + R +++V+L + L I++A D
Sbjct: 347 HLHRIGDIERIISKVAVGRVSPREVVQLKYALGALKPIKAACLTN-------------DS 393
Query: 430 LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSS--YDTGLSALKNEQESLER----Q 483
E + D +N AL E +D + ++ +++ TG S +E S+ R
Sbjct: 394 AEIRSIGDQINLCEALYE-RIDRELQQDPPQLVAKGGVIATGFSPELDELRSISRGGRDY 452
Query: 484 IHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGV 543
+ + ++ A + ++LK+ FG+ + + ++ ++I +T +
Sbjct: 453 LLKIQEEEAQKTGI---QSLKVGYNNVFGYYLEVRNT----YKDQVPQEWIRKQTLANAE 505
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
++ +LK+ + E+ + L ++ + ++ A +++ LD LLSFA
Sbjct: 506 RYITEELKQYEQKIMGADEQILVLETRLFTELVTDMQAYIPQIQADANIVARLDCLLSFA 565
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQII 661
A Y RP + +V +I RHP +E Q V ++PND +L + II
Sbjct: 566 KTAEE--HRYVRPVVEDDNVLEI--RAGRHPVIETQLPVGEEYVPNDIELDTEQQQIMII 621
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKS +RQ + LMAQ+G FVP D A + V D IF RVGA D G STFM
Sbjct: 622 TGPNMAGKSALLRQTALITLMAQMGCFVPADSAHVGVVDKIFTRVGASDNISLGESTFMV 681
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFH 779
EM E ++IL T RSL++ DELGRGTSTYDG +AWAI E+L + + +A TLFATH+H
Sbjct: 682 EMTEASNILNNVTPRSLVLFDELGRGTSTYDGISIAWAIVEYLHQNPKAQARTLFATHYH 741
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
EL NE K + NY+VS + K+ L K+ G + SFGIHVAE A
Sbjct: 742 EL--------NEME-KNFERIKNYNVS--VKELDGKVIFLRKLMRGGSEHSFGIHVAEIA 790
Query: 840 NFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRIS 881
P SVV A +LE +D+A + V S R+ +S
Sbjct: 791 GMPRSVVKRAENILKQLE--------ADNASVGVESARQIVS 824
>gi|417901337|ref|ZP_12545213.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21266]
gi|341845176|gb|EGS86378.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21266]
Length = 872
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 310/593 (52%), Gaps = 63/593 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ITKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L ++L++ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--NTLVQVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + ++ D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
FG+ IT+ EP + Q T + +F +LK+ D ++
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+ +L ++ + ++E + A ++SELD L SFA++A Y RP + +
Sbjct: 509 ELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YIRPSFSENKTLE 566
Query: 626 IILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV + +MAQ
Sbjct: 567 LV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAIISIMAQ 623
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLII DE+
Sbjct: 624 MGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLIIFDEI 683
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + + + N H
Sbjct: 684 GRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPSLKNVH 734
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
V+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 735 VAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
>gi|223933229|ref|ZP_03625220.1| DNA mismatch repair protein MutS [Streptococcus suis 89/1591]
gi|386585132|ref|YP_006081535.1| DNA mismatch repair protein MutS [Streptococcus suis D9]
gi|223898159|gb|EEF64529.1| DNA mismatch repair protein MutS [Streptococcus suis 89/1591]
gi|353737278|gb|AER18287.1| DNA mismatch repair protein MutS [Streptococcus suis D9]
Length = 846
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 215/682 (31%), Positives = 348/682 (51%), Gaps = 79/682 (11%)
Query: 202 SSECKTLRDALTR---CGVMLTERKKTEFKTR-DLVQDLDRLVRGSVEPVRDLVSGFEIA 257
+S C +R+ R G L+E ++ F + +L+ + V V+ + + ++ E A
Sbjct: 159 TSLCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA 218
Query: 258 PGALGALLSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
A G LLSY + D S+ + Y + Y+++D A +L++LE+ K+ S
Sbjct: 219 --AAGKLLSYLHRTQMRDLSHLQK--VVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGS 274
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L+ L++ T TA MG RLL W+ +PL+D+ I R IVQ F+D R DL + LK +
Sbjct: 275 LYWLLDETKTA-MGMRLLRTWIDRPLIDLKRIENRQAIVQVFLDYFFERSDLVEALKGVY 333
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLT 434
DIERL + + + +++L Q+ +P I++ LQQ E +L+ LDP+ L
Sbjct: 334 DIERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAG--LDPIPELH 391
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALK----------NEQESLE 481
AL+ +++D + + +G +I + +D L + E E+ E
Sbjct: 392 ---------ALISSAIDPEAQGTITDGN-IIRTGFDETLDQYRLVIREGAGWIAEIEAKE 441
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
R+ ++ LK+D + G+ F +T + F T K+
Sbjct: 442 REASGINN-------------LKIDYNKKDGYYFHVTNSNLGNV----PDHFFRKATLKN 484
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
++ +L K+ Q + ++ N + E+ R+ Q + + LA ++ +DVL +
Sbjct: 485 SERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQA 544
Query: 602 FADLASS----CPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKS 656
FA +A CP +T D ++ ++ RH VE +IPN L +
Sbjct: 545 FAVVAEQQHLVCPR-FT-------DQRELTIDRGRHAVVEKVMGKQTYIPNSIHL-NTDT 595
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
Q+ITGPNM GKST++RQ+ V ++MAQ+GS+VP D+A + + D IF R+GA D + G
Sbjct: 596 HMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRIGAADDLVSGQ 655
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM+E ++ ATDRSLI+ DELGRGT+TYDG LA +I E++ ++I A TLFAT
Sbjct: 656 STFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHDKIGAKTLFAT 715
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L ++ + + N HVS ++T L+K+ G D+S+GIHVA
Sbjct: 716 HYHELTDL---------SQTLEHLENVHVSTL--EKDGQVTFLHKIAQGPADKSYGIHVA 764
Query: 837 EFANFPESVVTLAREKAAELED 858
+ A PE ++ A LE+
Sbjct: 765 KIAGMPEELLQRADRILQTLEN 786
>gi|15639319|ref|NP_218768.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025561|ref|YP_001933333.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum SS14]
gi|378972827|ref|YP_005221431.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378973894|ref|YP_005222500.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378974956|ref|YP_005223564.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum DAL-1]
gi|378981803|ref|YP_005230108.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. CDC2]
gi|384421853|ref|YP_005631212.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408502210|ref|YP_006869654.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Mexico A]
gi|6093453|sp|O83348.1|MUTS_TREPA RecName: Full=DNA mismatch repair protein MutS
gi|238689318|sp|B2S2S5.1|MUTS_TREPS RecName: Full=DNA mismatch repair protein MutS
gi|3322604|gb|AAC65315.1| DNA mismatch repair protein (mutS) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018136|gb|ACD70754.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum SS14]
gi|291059719|gb|ADD72454.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374677150|gb|AEZ57443.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678220|gb|AEZ58512.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679289|gb|AEZ59580.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|374680354|gb|AEZ60644.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum DAL-1]
gi|408475573|gb|AFU66338.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Mexico A]
Length = 900
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 206/620 (33%), Positives = 304/620 (49%), Gaps = 57/620 (9%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
A GAL++Y E + I +Y + ++ +D A + L +L++ D+ SLF
Sbjct: 236 AAAGALIAYLEETTRHPLSHVSAITRYHIHDFVEIDDATRKNLEILQNLHDSTHAHSLFE 295
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
+N T TA MG RLL WL PL EI RL V F + + LR L + D+E
Sbjct: 296 TLNYTHTA-MGTRLLRYWLHHPLRSQEEIQKRLSAVVFFHHRPHILKTLRATLSCVRDVE 354
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP--LESLTDD 436
RL+ + +A + ++ L +S +R+ L F SL +E P L S D
Sbjct: 355 RLVARVALEKAHGRDLLALKES------LRAILT-----FRSLERESPFPPDLLPSEGDT 403
Query: 437 DHLNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHSLHKQ 490
L + L+E S+ D L +G + S+S D N E L++ + ++
Sbjct: 404 PVLQELYGLLEQSIKEDCPVTLSDGNLIKRGFSASLDELHRVRDNANEILKQYLAEERER 463
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
T LK+ GH ++K + FI + + +FT +L
Sbjct: 464 TGIG-------TLKMKYNRMLGHFLEVSKGHLSAV----PAHFIRRRSLSNADRFTTEQL 512
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD--LASS 608
+L + + E + ++EL + +T + +++ ++ A +++LDVL SFA L
Sbjct: 513 SELEAKLARAREGLVSFEQELFADIRRTVCSHTQLLRTNAARVAQLDVLQSFAHAALQHG 572
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSW----FQIITG 663
P D G + + G RHP VE F+PND L + F +ITG
Sbjct: 573 WSQPVFIKD------GALRITGGRHPVVELHLPSGEFVPNDLTLSSSEHAVLPRFALITG 626
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKSTF+RQ + L+AQVGSFVP ++A ++ D IF RVGA D RG STF+ EM
Sbjct: 627 PNMAGKSTFLRQTALICLIAQVGSFVPAEKAELTPVDRIFCRVGAADNLARGESTFLVEM 686
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
ETA IL+ AT SL+I+DE+GRGT+T DG +A A+ E+L+ +RA TLFATH+HEL+
Sbjct: 687 SETAHILRAATRDSLVIMDEVGRGTATEDGLSIAQAVSEYLLHHVRAKTLFATHYHELSR 746
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LAH H+ + T + L KV PG+C S+GI+VA A PE
Sbjct: 747 LAHPQLE-------------HLKLDVLETDNTIVFLKKVTPGSCGSSYGIYVARLAGLPE 793
Query: 844 SVVTLAREKAAELEDFTPSA 863
SV+ A E +L+ SA
Sbjct: 794 SVLARACELLKQLQQRAGSA 813
>gi|363893649|ref|ZP_09320744.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium ACC19a]
gi|361963451|gb|EHL16523.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium ACC19a]
Length = 851
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 218/720 (30%), Positives = 368/720 (51%), Gaps = 57/720 (7%)
Query: 217 VMLTERKKTEFKTRDLVQDL---DRLVRGSV--EPVRDLVSGFEIAPGALGALLSYAELL 271
+ L + K+ FK ++ + + +V+ + E + + +S +A + +L+ + +
Sbjct: 176 IFLKKLKENSFKNSKIINNFLIENNVVQNTANYENIEEFISDNNLA-DKIPSLIQIYKYV 234
Query: 272 SDESNYG--NYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
D + N++ K + YM LD ++ L ++ES N +++LF ++N+ T+ MG
Sbjct: 235 YDTQKFFDINFFYEKNQV-KYMSLDYYTIKNLELIES-IRKNNSYTLFWVLNKANTS-MG 291
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL +L +PL D NEI RL+ V +FV+ ++ + L+ + D+ER+ + +
Sbjct: 292 SRLLKQYLLKPLNDENEIRQRLNKVSSFVEHYSVSTGVSHILREVYDLERISNRIVYDTV 351
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
+ ++ L +S L + ++G+ S +E Y E L+ +D L I L+E S
Sbjct: 352 SHRDLLNLKKS---LKAVNEIKNIFKGENDSRFEELY----EVLSKND-LMPIINLIENS 403
Query: 450 VD-LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKG 508
++ + + E++I SSYD L+ + + LE + L K + + K LK+
Sbjct: 404 IEEIGEDFKKEHIIKSSYDEKLAHYR---DLLENTSNILIKMERDEREKTGIKNLKISYN 460
Query: 509 TQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
FG+ ITK + + + +T +F N LKK+ ++ + +
Sbjct: 461 KVFGYYIEITKAALQNFN--MPSDYERRQTLVSSERFINNNLKKIEEEMLTARQGESQLE 518
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
L V + F +A M+S++DV + A A Y +P I+ G+I++
Sbjct: 519 SALYKEVKEELKNFIPKIMQVAEMISQIDVYTALAKTA--IENDYVKPMISID--GNIVI 574
Query: 629 EGSRHPCVEA----QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQ 684
+ RHP +E +D+V PND L KS IITGPNM GKST++RQV + +LMA
Sbjct: 575 KNGRHPVIEKLLPNEDYV---PNDTDL--TKSETHIITGPNMAGKSTYMRQVAIIMLMAH 629
Query: 685 VGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDEL 744
+GS+VP A I + D I+ R+GA D G STFM EM E ++ILK AT SLII+DE+
Sbjct: 630 IGSYVPASFAQIPIIDSIYTRIGASDDLSMGQSTFMVEMTEVSNILKNATQNSLIILDEI 689
Query: 745 GRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYH 804
GRGTSTYDG LA++I E++ E I+A TL +TH+HELTAL + N + NY
Sbjct: 690 GRGTSTYDGMSLAFSIVEYICEHIKAKTLVSTHYHELTALESKYKN---------IKNY- 739
Query: 805 VSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAV 864
+ S+++ L K+ G D+S+GIHVA+ A+ P V+ A ++LE ++
Sbjct: 740 --CMLVDDSKEIKFLRKIVLGKADKSYGIHVAQLADLPYEVLERANIILSKLE----TSE 793
Query: 865 ISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
K S++ ++S N R Q +K D+ ++ K+A++ + ++K +L
Sbjct: 794 KKSSKKYNQKSEQDQVSIENFSKDNNLRIVQKIK---DLNIDEYTPKQAMDLLYKIKSEL 850
>gi|118579497|ref|YP_900747.1| DNA mismatch repair protein MutS [Pelobacter propionicus DSM 2379]
gi|189083167|sp|A1AMW9.1|MUTS_PELPD RecName: Full=DNA mismatch repair protein MutS
gi|118502207|gb|ABK98689.1| DNA mismatch repair protein MutS [Pelobacter propionicus DSM 2379]
Length = 870
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 202/613 (32%), Positives = 298/613 (48%), Gaps = 52/613 (8%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
IR Y ++ LD A R L + S + K+ SL G ++RT TA MG R L WL PL
Sbjct: 259 IRVYQRSEHLALDPATRRNLEITASMAEGKKSGSLLGCLDRTVTA-MGARRLKQWLGYPL 317
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ + I +RLD V+ ++ R +L +K I+D+ERL + A + + L+ S
Sbjct: 318 VGLEPIRSRLDAVEELLEGATTRDELAAQMKGIADLERLNGRIGMASASGRDLRALHDSL 377
Query: 402 IRLPYIRSALQQYE-GQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
R+P +R + + L KE +DPLE + D LV + +EN +
Sbjct: 378 QRIPPLRELMATMQTALLCQLTKE--IDPLEDILD---------LVGRGI----VENPPF 422
Query: 461 ------MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHV 514
+I+ Y+ L L++ + I L Q + + +LK+ FG+
Sbjct: 423 SLREGGIIAPGYNPELDELRSISHEGKGFIARLEAQERARTGI---SSLKIRFNKVFGYS 479
Query: 515 FRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNR 574
ITK + +I +T + ++ +LK ++ + + L
Sbjct: 480 IEITKSNLASV----PADYIRRQTLANAERYITEELKNYEEKVLGAEDRIHELEYSLFQE 535
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
+ + A+ L+ LDVL+S A +A Y +P ++ V DI RHP
Sbjct: 536 IRERVAGEGSRIACSASGLATLDVLISLAGVADE--RGYCKPLVDDSQVIDI--HDGRHP 591
Query: 635 CVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
+EA F+PND L G+S +ITGPNM GKST++RQV + LMAQ GSFVP
Sbjct: 592 VIEAMKLGERFVPNDTLLDGGESQILMITGPNMAGKSTYMRQVALITLMAQAGSFVPAAS 651
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A I + D IF RVGAGD RG STFM EM+E A IL+ AT +SLI++DE+GRGTST+DG
Sbjct: 652 ARIGIADRIFTRVGAGDNLSRGQSTFMLEMMEAAGILRNATPKSLIVMDEIGRGTSTFDG 711
Query: 754 FGLAWAICE--HLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
+AWA+ E H R+ TLFATH+HELT LA + N+ V+ +
Sbjct: 712 VSIAWAVAEYIHDTPTCRSRTLFATHYHELTELAATRER---------IRNFTVA--VRE 760
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKI 871
+ ++ L + PG S+GI VA A P V+ A+E LE+ + A
Sbjct: 761 WNDQVIFLRTIVPGGASHSYGIQVARLAGMPADVIERAKEILRNLEN----GEFEEGAPR 816
Query: 872 EVGSKRKRISDPN 884
S+R+R DP+
Sbjct: 817 IAKSRRQRTPDPS 829
>gi|456358627|dbj|BAM93072.1| DNA mismatch repair protein MutS [Agromonas oligotrophica S58]
Length = 916
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 200/586 (34%), Positives = 298/586 (50%), Gaps = 51/586 (8%)
Query: 289 SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEIN 348
S M +D A RA L + SL ++ T T+ G RLL L PL + +I
Sbjct: 297 STMAIDPA-TRANLELTRTLAGERRGSLLDAIDCTVTSA-GSRLLAQRLAAPLTEPGQIG 354
Query: 349 ARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLY-------QSS 401
RLD V FV D A R+D+R L+ D+ R M L R G + + L Q+
Sbjct: 355 RRLDAVNTFVADGAAREDIRSILRGAPDMTRAMARLSVGRGGPRDLAALRDGILAADQAM 414
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYM 461
RL SAL Q + +S + P +L D+ F ++ + L + + G
Sbjct: 415 ARL----SALDQPPQEVAS-VTAALAKPARTLADE-----FARALDEQLPLIKRDGG--F 462
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
+ S YD L +N +++ + S+ + A + KALK+ G+ +T +
Sbjct: 463 VRSGYDATLDETRNLRDASRLVVASMQARYADQTGV---KALKIRHNNVLGYFVEVTAQH 519
Query: 522 EPKI-RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
K+ L FI +T V+FT ++L ++ + E N + E+ +R+ A+
Sbjct: 520 GDKLMSAPLNATFIHRQTLAGQVRFTTSELGEIEAKIANAGERALNLELEIFDRLCGQAL 579
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE--- 637
+ ++ A + LDV + A LA Y RP+++ +G +EG RHP VE
Sbjct: 580 AIGDDLRAAAHGFAMLDVATALAKLAVD--DNYVRPEVDG-SLG-FAIEGGRHPVVEQAL 635
Query: 638 AQDWVNFIPNDCKLI------RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPC 691
++ FI N C L G+ W ++TGPNM GKSTF+RQ + L+AQ+GSFVP
Sbjct: 636 KREGQPFIANSCDLSPTPGHKSGQLW--LLTGPNMAGKSTFLRQNALIALLAQIGSFVPA 693
Query: 692 DRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTY 751
RA I + D +F+RVGA D RG STFM EM+ETA+IL A +R+L+I+DE+GRGT+T+
Sbjct: 694 SRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALVILDEIGRGTATF 753
Query: 752 DGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
DG +AWA EHL E R TLFATH+HELTALA + FN + +
Sbjct: 754 DGLSIAWAAIEHLHESNRCRTLFATHYHELTALAAKLPRLFN-----------ATVRVKE 802
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ L++V PG+ D+S+GI VA+ A P +V++ A+ A+LE
Sbjct: 803 WQGDVVFLHEVLPGSADRSYGIQVAKLAGLPPAVISRAKSVLAKLE 848
>gi|373494868|ref|ZP_09585465.1| DNA mismatch repair protein MutS [Eubacterium infirmum F0142]
gi|371967230|gb|EHO84702.1| DNA mismatch repair protein MutS [Eubacterium infirmum F0142]
Length = 867
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 250/767 (32%), Positives = 377/767 (49%), Gaps = 83/767 (10%)
Query: 113 LVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFPNFRENGCTIGLGYVDLTKRVLGLAEF 172
++K TPG L S ++ +E I + C I G + T+ G
Sbjct: 105 VIKIITPGTLTS--QMMLNESENNYLAAIYCDKAGISISYCDISTGELRTTEMTAG---- 158
Query: 173 LDDSHFTNVESALVALGCKECLLPTEAVKSSECK-TLRDALTRCGVMLTERKKTEFKTRD 231
+ + ++ + + +GCKE ++ E + K L DA + +++ + +D
Sbjct: 159 --NDIYNDMINEICRIGCKE-IIANEGFEDIFSKEKLADASGAYVQIKSDKYYSSKAAKD 215
Query: 232 LVQDLDRLVRGSVEPVRDLVSGFE---IAPGALGALLSYAELLSDESNYGNYYIRK---Y 285
++ +L L +G+ L+SG E + LGALLSY L + G I +
Sbjct: 216 ILDEL--LGKGAF-----LISGIEDRYLCQKNLGALLSY---LMETQRQGLNQITGCVYF 265
Query: 286 SLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVN 345
L+ M LD A++R L + E+ D N SL G++++T TA MG RL+ L++PL D +
Sbjct: 266 ELNDQMSLDKASLRNLEISETLYDKNIKGSLLGVLDKTKTA-MGARLIKKMLREPLNDAD 324
Query: 346 EINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLP 405
+IN RLD V+ D L DL + LK+I D ERL + A + ++ L S LP
Sbjct: 325 KINDRLDAVEEIYIDPLLENDLVESLKKIYDFERLAARIATGTANGKDLIALRNSIAVLP 384
Query: 406 YIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSS 465
I++ L S L+K+ + D + +L DD + + + E G +I
Sbjct: 385 NIKADLSS---SGSKLLKDIH-DGISNL--DDIADLITQSISENAGFTIKEGG--LIIDG 436
Query: 466 YDTGLSALKNEQESLERQIHSL--HKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-- 521
+ L LK + + I L H++ + + K LK+ FG+ +T+
Sbjct: 437 FSEELDKLKASIKDAKAWIAGLEAHERERTGI-----KTLKVGYNKVFGYYIDVTRANSN 491
Query: 522 ---EPKIRKKLTT---QFIVLETRK--DGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVN 573
E IRK+ ++I E ++ + V TK+ KL EY+ V+
Sbjct: 492 LVPEDYIRKQTLVNNERYITPELKETENLVFNAETKINKL---------EYEI----FVS 538
Query: 574 RVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRH 633
Q EI + + ++ LDV+ SFA A S YT+P ++ + ++++E RH
Sbjct: 539 IRTQIEARIKEI-QDTSKAIAILDVICSFA--AVSRNYGYTKPIVD--NSKELVIEAGRH 593
Query: 634 PCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
P VE + F+ N+ L S IITGPNM GKST++RQ + +LMAQ G FVPCD
Sbjct: 594 PVVERMEGGEQFVSNETYLNDTDSSLMIITGPNMSGKSTYMRQNALIVLMAQAGCFVPCD 653
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
RA I V D IF R+GA D G STF EM E + IL A+DRSLII+DE+GRGTSTYD
Sbjct: 654 RARIGVVDRIFTRIGASDNLSGGQSTFFVEMSELSYILNCASDRSLIILDEIGRGTSTYD 713
Query: 753 GFGLAWAICEHLV-EEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDS 811
G +AW+ E+L + TLFATH+HELTAL Q+ GV N +V D
Sbjct: 714 GLSIAWSCIEYLCNKNTHIRTLFATHYHELTAL---------ESQIDGVKNLNVDVAEDD 764
Query: 812 TSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELED 858
+ L+K+ PGA +S+GIHVA+ A P+ ++ A K AELE+
Sbjct: 765 GD--IVFLHKIVPGAASRSYGIHVAKLAGVPKVLLDNAENKLAELEE 809
>gi|291294833|ref|YP_003506231.1| DNA mismatch repair protein MutS [Meiothermus ruber DSM 1279]
gi|290469792|gb|ADD27211.1| DNA mismatch repair protein MutS [Meiothermus ruber DSM 1279]
Length = 853
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 206/603 (34%), Positives = 305/603 (50%), Gaps = 62/603 (10%)
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESK--TDANKNFSLFGL 319
GA+L+YA + + +Y ++M+L A +R L + E D ++ +L G+
Sbjct: 238 GAVLAYALRVQENGLPQVRSFVRYDPGAFMQLSEATLRTLEIFEPSFVGDRSEERTLLGV 297
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+ T TA G+RLL WL+ PL++ + ARLD V+A V D LR ++R+ L R+ D+ER
Sbjct: 298 LGLTRTAP-GRRLLRAWLRHPLVEEAPLQARLDAVEALVKDGVLRAEVRKVLYRMHDLER 356
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L L RA + + L +S LP + L FS + ER P+
Sbjct: 357 LAARLLAGRASPRDLAALQRSLALLPELAGLLAGVGPLFS--LSERLPQPVAVAE----- 409
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
ALVE L + G +I +D L L+ E I L + +P
Sbjct: 410 QIAAALVEDP-PLKITDGG--LIREGFDPELDELRQRAEEGRAWIARLEGEAREKTGIP- 465
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
LK+ FG+ +T+ + K + L+T KD ++F+ +LK +Q +K
Sbjct: 466 --NLKVGYNAVFGYYLEVTRPHYALVPK----DWRALQTLKDRMRFSTPELK---EQERK 516
Query: 560 VLEEYKNCQK-------ELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTP 612
+L+ K EL +V Q A + + A +L+ELDV + A+ ++
Sbjct: 517 ILQAETEAIKREYAVFLELREQVAQAA----DEVRQAAQVLAELDVYAALAE--AAVEYG 570
Query: 613 YTRPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTF 672
Y+RP + G + + RHP VE FIPND + I+TGPNM GKST+
Sbjct: 571 YSRPRFS--RDGTLQIVAGRHPVVERSS--PFIPNDLSMSPAARLL-ILTGPNMAGKSTY 625
Query: 673 IRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKG 732
+RQ + L+AQVGSFVP + A++ + D I+ R+GA D G STFM EM E A IL+G
Sbjct: 626 LRQTALIALLAQVGSFVPAESATLPLFDRIYTRIGASDDIAGGRSTFMVEMDELAGILQG 685
Query: 733 ATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALA-----HE 787
AT +SL+++DE+GRGTSTYDG LAWA CE+L +++RA TLFATH+ ELTAL
Sbjct: 686 ATSKSLVLLDEIGRGTSTYDGLALAWAACEYLHDQVRAYTLFATHYFELTALPLRMAAAR 745
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
NA+ ++ G+ YH +V PG QS+G+ VA A P++V+
Sbjct: 746 NAHVAAKEEAGGLVFYH----------------QVLPGPASQSYGLEVARLAGLPQAVLQ 789
Query: 848 LAR 850
AR
Sbjct: 790 RAR 792
>gi|166031820|ref|ZP_02234649.1| hypothetical protein DORFOR_01521 [Dorea formicigenerans ATCC
27755]
gi|166028273|gb|EDR47030.1| DNA mismatch repair protein MutS [Dorea formicigenerans ATCC 27755]
Length = 874
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 214/677 (31%), Positives = 336/677 (49%), Gaps = 46/677 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL Y + S + Y+ YM LDSA R L + E+ + K SL +
Sbjct: 230 ASGALLIYLKETQKTSLSHMSRLIPYAAGKYMLLDSATRRNLELCETLREKQKRGSLLWV 289
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R L +++QPL+ +I RLD + +D+ R+++R++L I D+ER
Sbjct: 290 LDKTKTA-MGARNLRKYIEQPLVQKYDIEKRLDALNELLDNAISREEIREYLSPIYDLER 348
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + + A + ++ S LP+I+ L + S L+KE Y D D L
Sbjct: 349 LVSKITYQSANPRDMIAFESSLSMLPHIKYILSE---MTSPLLKELY-------EDLDTL 398
Query: 440 NKFIALVETSVDLD----QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L++ ++ D E G +I Y+ + L++ + + + L
Sbjct: 399 EDLCTLIKDAIQEDPPLAMKEGG--IIRDGYNPEVDKLRSAKSDGKDWLAKLESDEREKT 456
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K LK+ FG+ +T + + T + +T + ++ +LK+L D
Sbjct: 457 GI---KNLKIKYNKVFGYYLEVTNSFKDLVPDYYTRK----QTLANAERYIIPELKELED 509
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
++ + + EL + + + A +++++D L S A +A Y R
Sbjct: 510 TILGAEDKLYSLEYELYSDIRSRVAKDVVRVQKTAKVIAQIDTLASLALVAEQ--NNYVR 567
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
P IN V DI + RHP VE + FI ND L K IITGPNM GKST++R
Sbjct: 568 PKINEKGVIDI--KDGRHPVVEKMIPNDMFISNDTYLNDKKDRIAIITGPNMAGKSTYMR 625
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q + +LMAQ+GSFVP +A I + D IF RVGA D G STFM EM E A+IL+ AT
Sbjct: 626 QTALIVLMAQIGSFVPASKADIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNAT 685
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEF 792
+SL+I+DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT L + N
Sbjct: 686 SKSLLILDEIGRGTSTFDGLSIAWAVIEHISNSKLLGAKTLFATHYHELTELEGKIDN-- 743
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
V NY ++ + + L K+ G D+S+GI VA+ A PESV A+E
Sbjct: 744 -------VNNYCIA--VKENGDDIIFLRKIVKGGADKSYGIQVAKLAGVPESVTDRAKEI 794
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGA----ARAHQFLKEFSDMPLETM 908
EL ++ I D A + + + D D+++ + + LKE ++ L +
Sbjct: 795 VEELVQTDITSRIKDIAVLGAPKPKAKKYDDVDLAQMSLFDTVKDDDVLKELKELDLGNL 854
Query: 909 DLKEALERVKRMKDDLE 925
EAL + ++++ L+
Sbjct: 855 TPIEALNTLYQLQNKLK 871
>gi|422877527|ref|ZP_16923997.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1056]
gi|332360166|gb|EGJ37980.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1056]
Length = 849
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 210/655 (32%), Positives = 331/655 (50%), Gaps = 60/655 (9%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ Y + ++++D A +L++ E+ K+ SL+ LM+ T TA MG R+L W+++PL+
Sbjct: 242 QHYEIKDFLQMDYATKASLDLTENARSGKKHGSLYWLMDETKTA-MGGRMLRSWIQRPLI 300
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
D I+ R ++V+ F+D R DL + LK + DIERL + + + +++L +
Sbjct: 301 DEARISQRQNVVEVFLDHFFERSDLTESLKGVYDIERLASRVSFGKTNPKDLLQLAATLG 360
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPLESLT---------DDDHLNKFIALVETSVD-- 451
+P I++ LQ Q + + E LDP+ L D H+ ++ T D
Sbjct: 361 NVPQIKAILQGIGSQHLARLIEG-LDPIPELAGLISSAISPDAPHIITEGNIIRTGFDET 419
Query: 452 LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQF 511
LDQ Y + TG A E E ER + LK+D +
Sbjct: 420 LDQ-----YRLVLREGTGWIA---ELEVKERANSGISN-------------LKIDYNKKD 458
Query: 512 GHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKEL 571
G+ F +T + + + F T K+ +F +L ++ + + E+ N + E+
Sbjct: 459 GYYFHVTNSQLAHV----PSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYEI 514
Query: 572 VNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGS 631
R+ + A + + ++LA L+ +DVL SFA +A RP + +E
Sbjct: 515 FMRIREEAGKYIQRLQALAQTLAAVDVLQSFAAVAEQLH--LVRPVFTAER--RLQIEKG 570
Query: 632 RHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVP 690
RH VE ++IPN L+ ++ Q+ITGPNM GKST++RQ+ + ++MAQ+GS+VP
Sbjct: 571 RHAVVEKVMGAQSYIPNSI-LLDQETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYVP 629
Query: 691 CDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTST 750
AS+ + D IF R+GA D + G STFM EM+E ++ A++RSLI+ DELGRGT+T
Sbjct: 630 AQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTAT 689
Query: 751 YDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHID 810
YDG LA AI EH+ A TLFATH+HELTAL EN+ E + N HV+
Sbjct: 690 YDGMALAQAIIEHIHHYTGAKTLFATHYHELTAL--ENSLEH-------LENVHVATL-- 738
Query: 811 STSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAK 870
++T L+K+EPG D+S+GIHVA+ A PE ++ A + LE S ++
Sbjct: 739 EKDGQVTFLHKIEPGPADKSYGIHVAKIAGLPEKLLERADSILSHLE----SQDTGLGSE 794
Query: 871 IEVGSKRKRISDPNDMSRGA-ARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
+ S+ K+ MS A + L E D+ + M E + V +K L
Sbjct: 795 LPTASRPKQSQVAEQMSLFAEGTENPVLTELRDLDIYNMTPLEVMAAVAELKKKL 849
>gi|292669799|ref|ZP_06603225.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
gi|292648596|gb|EFF66568.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
Length = 866
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 228/690 (33%), Positives = 339/690 (49%), Gaps = 66/690 (9%)
Query: 257 APGALGALLSYAE--LLSDESNYGNYYIRKYSLDSY--MRLDSAAMRALNVLESKTDANK 312
A A+ ALL Y +++D S R LD+ M+LD+ +R L + S D +K
Sbjct: 228 AQTAIAALLRYLHDTVMADLSQIN----RLAFLDAAGTMQLDTYTLRNLEITRSLRDGSK 283
Query: 313 NFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLK 372
+LF +++ T T MG RLL WL+ PLL + I+ARLD V + +LR LR+ L+
Sbjct: 284 KNTLFDVLDFTRTP-MGTRLLKSWLEHPLLVPHRIDARLDAVAELAEKPSLRSGLREALR 342
Query: 373 RISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ----FSSLIKERYLD 428
I D ERL+ +E A + +V L S LP +R+AL E + F+ I
Sbjct: 343 SIYDFERLLTRIETLAANARDLVALRVSLAALPMVRTALGTAESRLLTHFAGAI------ 396
Query: 429 PLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
LT D+ + + + E G +I YD L L + + +
Sbjct: 397 ----LTFDELRDVLERAIVDEPGISVREGG--IIREGYDAALDDLHRFSHDSKALLQEME 450
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNT 548
++ + K LK+ FG+ + R ++ +I +T + +F
Sbjct: 451 ERERERTGI---KTLKIGYNKVFGYYIEVRHSG----RDQVPADYIRKQTLANTERFITE 503
Query: 549 KLKK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+LK LG Q + EY + EL RV + V +++A +++ +D L S A
Sbjct: 504 ELKAFEAKILGAQEKITALEY-HLFTELRERVREQLVPI----QNVARVIARVDALQSLA 558
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE--AQDWVNFIPNDCKLIRGKSWFQII 661
+ A++ Y RP I G+II+ RHP VE Q + F+PND L G + +I
Sbjct: 559 EAAAAYR--YVRPKICTAADGEIIIRDGRHPLVERILQREI-FVPNDTHLSHGGAETMLI 615
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST++RQV + LMAQVGSFVP A I+ D IF R+GA D + G STFM
Sbjct: 616 TGPNMAGKSTYMRQVALLTLMAQVGSFVPARSAQIAPVDRIFTRIGASDDLVSGQSTFMV 675
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHEL 781
EM E A IL+ AT SL+I+DE+GRGTST+DG +A A+ E + I A TLFATH+HEL
Sbjct: 676 EMNEVAQILREATRDSLVILDEIGRGTSTFDGMSIARAVVEFIDTRIHAKTLFATHYHEL 735
Query: 782 TALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANF 841
T +A E + NY ++ + +++ L ++ PGA D+S+GIHVA A
Sbjct: 736 TEMAGER-----------IRNYCIA--VREKGKRVAFLRRIIPGAADKSYGIHVARLAGL 782
Query: 842 PESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFS 901
P V E+A E+ + A E + R+ M+ + A L E
Sbjct: 783 PPRVT----ERAEEILHALEQKAAATAAAEEETAARQEPEQTEGMA--SLFADGTLDELR 836
Query: 902 DMPLETMDLKEALERVKRMKDDLEKDAGDC 931
+ + TM EAL + R+++ K+AG+
Sbjct: 837 ALDIMTMTPLEALNTLYRLQEQARKEAGEA 866
>gi|302386431|ref|YP_003822253.1| DNA mismatch repair protein MutS [Clostridium saccharolyticum WM1]
gi|302197059|gb|ADL04630.1| DNA mismatch repair protein MutS [Clostridium saccharolyticum WM1]
Length = 884
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 210/681 (30%), Positives = 344/681 (50%), Gaps = 51/681 (7%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA++ Y S I YS YM +D++ R L +LE+ + K SL +
Sbjct: 236 AAGAVMEYMYETQKSSLSHITTITPYSTGQYMIIDTSTRRNLELLETLREKQKRGSLLWV 295
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++RT TA MG R+L +++QPL+ EI R + ++ R+++ ++L I D+ER
Sbjct: 296 LDRTKTA-MGARMLRTYIEQPLIHKPEITKRQNAIEELNMSFISREEICEYLNPIYDLER 354
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY--LDPLESLTDDD 437
L+ + + A + ++ S LP+I++ L+++ S ++K+ + LDPLE + +
Sbjct: 355 LIGRISYKTANPRDLIAFKSSLEMLPHIKNLLKEFS---SDMLKDLWGELDPLEDVRE-- 409
Query: 438 HLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
L+ ++ D L +G +I + L++ + + + L Q
Sbjct: 410 -------LIGRAIIDDPPVTLRDGG-IIRDGFHEEADKLRSAKTEGKNWLADLESQEKEK 461
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLG 554
+ K LK+ FG+ F +T + + FI +T + ++T +LK+L
Sbjct: 462 TGI---KNLKVKFNKVFGYYFEVTNS----FKDLVPDYFIRKQTLANAERYTTDQLKELE 514
Query: 555 DQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYT 614
+ ++ + + L +V + + A ++ +DVL S + +A+ Y
Sbjct: 515 NVILGAEDKLFSLEYSLFCQVRDSVADQVLRIQKTARAIAGIDVLTSLSSVATR--NNYV 572
Query: 615 RPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
+P IN + DI + RHP VE + F+ ND L GK+ IITGPNM GKST++
Sbjct: 573 KPQINEKGLIDI--KNGRHPVVEKMMRDDLFVSNDTYLDNGKNRVSIITGPNMAGKSTYM 630
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQ + +L+AQ+GSFVP + A+I + D IF RVGA D G STFM EM E A+IL+ A
Sbjct: 631 RQTALIVLLAQIGSFVPAEEANIGICDRIFTRVGASDDLASGQSTFMVEMTEVANILRNA 690
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANE 791
T SLI++DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT L
Sbjct: 691 TKNSLIVLDEIGRGTSTFDGLSIAWAVVEHISNPKILGAKTLFATHYHELTELE------ 744
Query: 792 FNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
M GV NY ++ + + L K+ G D+S+G+ VA+ A P+SV+ A+E
Sbjct: 745 ---GTMSGVNNYCIA--VKEQGDDIVFLRKIIKGGADKSYGVQVAKLAGVPDSVIVRAKE 799
Query: 852 KAAELEDFTPSAVISDDAKIEVG-SKRKRISDPNDMSR------GAARAHQFLKEFSDMP 904
AEL D +A + A I +RK + P+++ + +KE ++
Sbjct: 800 LLAELSDADITAKAREIAGINANIIQRKVVPKPDEVDLQQMSLFDTVKDDDIIKELGELE 859
Query: 905 LETMDLKEALERVKRMKDDLE 925
L M +AL + R++ L+
Sbjct: 860 LGNMTPIDALNILYRLQTKLK 880
>gi|422809484|ref|ZP_16857895.1| DNA mismatch repair protein MutS [Listeria monocytogenes FSL
J1-208]
gi|378753098|gb|EHY63683.1| DNA mismatch repair protein MutS [Listeria monocytogenes FSL
J1-208]
Length = 860
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 338/650 (52%), Gaps = 48/650 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +YM++D + R L + ES + +L L++ T TA MG R+L W+ +PL+D
Sbjct: 248 YETSNYMKMDYYSKRNLELAESIRGKGRQGTLLWLLDNTQTA-MGGRMLKQWIDRPLIDR 306
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N+I R + V + + R +L ++LK + D+ERL + + +++L S ++
Sbjct: 307 NKIIERQNDVSELMANFFERLELVENLKNVYDLERLAGRVAYGNVNARDLIQLRNSLYQI 366
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P IR+ L + + + + LDP E LT+ K + S + E G +I
Sbjct: 367 PRIRATLLSMNSKSLTELANQ-LDPCEELTE-----KLEEAIMDSAPISIREGG--IIKD 418
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE--- 521
Y++ L ++ + + I L ++ + +L K +K+ FG+ +T+
Sbjct: 419 GYNSQLDTYRDASRNGKTWIAELERK---ERELTGIKTMKVGFNRVFGYYIEVTRANTHL 475
Query: 522 --EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
E + +K +T + ++ +LK+ E+ + +L V +
Sbjct: 476 LPEGRYERK--------QTLTNAERYITPELKEKEKLILDAEEKSMELEYQLFTEVRELV 527
Query: 580 VTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-A 638
+ E + LA +SE+D L SFAD++ + RP ++ + G + ++ RHP VE
Sbjct: 528 KDYIERLQKLAKSVSEIDCLQSFADISEK--NHFIRPTLS--EDGSLHVKQGRHPVVEKV 583
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
+++ NDC L R + +ITGPNM GKST++RQV + + AQVG FVP + A++ +
Sbjct: 584 MGAQSYVANDCDLDRNREIL-LITGPNMSGKSTYMRQVALTAICAQVGCFVPAEEATLPI 642
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF R+GA D + G STFM EMLE + + AT SLI+ DE+GRGT+TYDG LA
Sbjct: 643 FDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLILFDEIGRGTATYDGMALAQ 702
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
AI E++ E + A TLF+TH+HELT L K++ G+ N HVSA ++ K+
Sbjct: 703 AIIEYIHENVHAKTLFSTHYHELTDLE---------KELHGLQNIHVSAVEENG--KVVF 751
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRK 878
L+K++ G D+S+GIHVAE A P+S++ A +LE+ VI++D + E +
Sbjct: 752 LHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLENDDKKMVITNDKQPEEIHEEV 811
Query: 879 RIS----DPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
++S +P + +++ + LKE + M + M +A+ ++ ++ +
Sbjct: 812 QLSMFPVEPE--KKASSKETKLLKEIASMNIMQMTPMDAMNKLYELQSKI 859
>gi|406927223|gb|EKD63285.1| hypothetical protein ACD_51C00302G0003 [uncultured bacterium]
Length = 870
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 242/833 (29%), Positives = 389/833 (46%), Gaps = 78/833 (9%)
Query: 35 VRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGTGSDALSSVSVSKNMFET-IARDLL 93
+ FF D+Y GE+A +K T TA + G + + V + E IA+
Sbjct: 20 ILFFRLGDFYEMFGEDAITASKILNITLTARNK---GDNRVPMCGVPYHAAENYIAK--- 73
Query: 94 LERTDHTLELYEGSGS-------NWRLVKSGTPGNLGSYEDVLFANNEMQDTPVIVALFP 146
L R + + E + +V+ TPG ++ + + N + ++++FP
Sbjct: 74 LTRAGKCVAICEQTSDPNLPGIVEREVVRIVTPGT--TFNENIIEN---KTNNFLISIFP 128
Query: 147 NFRENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECK 206
GL DLT + E + ++ + + ++ + EC++ + ++ K
Sbjct: 129 ----KQTYFGLAVCDLTTGEFKVTEL---NGYSELRTEIIRIKPAECVIRKDFLEEEGLK 181
Query: 207 TLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL---GA 263
V E + +K L R + G G E P + G
Sbjct: 182 KFLHEFEDMCVFAFETFEDPYKFL-LAHFNTRSMEG---------FGIERWPFGMRAGGI 231
Query: 264 LLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRT 323
LLSY + I YS M LD A ++ L ++ + + + SL G+++ T
Sbjct: 232 LLSYLKQTQKSDLKHITRINSYSTAETMLLDEATIQNLELVATLREGKREGSLLGVIDST 291
Query: 324 CTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHN 383
TA MG R+L WL +PLL EI+ARLD V LR DLR L + D+ERL+
Sbjct: 292 ATA-MGGRMLKKWLLRPLLKKEEIDARLDGVLELTRKPTLRNDLRAKLGTMLDLERLIAR 350
Query: 384 LEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFI 443
L + ++ L S +P ++ L E + ER + +E LTD
Sbjct: 351 LSCATGNARDLIALKISLQTVPEMKKILSSAESEILKKANERLFE-IEKLTD-------- 401
Query: 444 ALVETSVDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
L+E ++ LD+ L G +I + L L+N + I +L ++ + +
Sbjct: 402 -LIEKAI-LDEPKMILREGG-LIKKGFFRELDDLRNLSTEGKTFIQNLQQREIARTGI-- 456
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+LK+ FG+ ++K + +I +T + +F +L++ ++
Sbjct: 457 -SSLKVRFNKVFGYYIEVSKANLSLV----PPDYIRKQTLVNAERFVTPELQEYEEKVLT 511
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
E+ + ++ V A+ F E ++ A ++ LDV+ SFA+ ++ Y RP++
Sbjct: 512 AEEKIIELEYKIFLEVKSQALEFIEEIQADAEIIGILDVIGSFAE--TAVKNRYCRPEVT 569
Query: 620 PPDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGV 678
+ I + RHP VE + F+ ND L +ITGPNM GKST++RQV +
Sbjct: 570 NKQLLKI--KEGRHPVVEQMTFARTFVSNDSFLDHENRQLLLITGPNMSGKSTYLRQVAL 627
Query: 679 NILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSL 738
LMA +GSFVP A I + D IF RVGA D +RG STFM EM ETA+I+ AT+RSL
Sbjct: 628 ITLMAHIGSFVPAASAEIGLTDRIFTRVGASDNLVRGQSTFMVEMQETANIINNATERSL 687
Query: 739 IIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMV 798
II+DE+GRGTSTYDG +AWAICE++ ++I+A TLFATH+HEL + +++
Sbjct: 688 IILDEIGRGTSTYDGMSIAWAICEYIHDKIKAKTLFATHYHELIPVV---------ERLE 738
Query: 799 GVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
N HV+A D + + LYK+ G D+S+GI V A P + + A++
Sbjct: 739 KGVNCHVTAKEDK-DKGIIFLYKILEGGIDKSYGIEVGRLAGLPVEITSKAKQ 790
>gi|88608613|ref|YP_506224.1| DNA mismatch repair protein MutS [Neorickettsia sennetsu str.
Miyayama]
gi|88600782|gb|ABD46250.1| DNA mismatch repair protein MutS [Neorickettsia sennetsu str.
Miyayama]
Length = 815
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 249/838 (29%), Positives = 406/838 (48%), Gaps = 78/838 (9%)
Query: 34 AVRFFDRRDYYTAHGENATFIAKTY-YHTTTALRQLGTGSD------ALSSVSVSKNMFE 86
AV F+ D+Y E+A ++ H T R G D +SS V N
Sbjct: 22 AVVFYRVGDFYEMFFEDAREVSHLLGLHLTR--RGTYKGKDIPMCGVPVSSCEVYINKLV 79
Query: 87 TIARDLLLERTDHTLELYEGSGSNW----RLVKSGTPGNLGSYEDVLFANNEMQDTPVIV 142
+ R + + T E + G+ +V+ TPG L ED L + E ++
Sbjct: 80 KLGRKVAICEQLETAEEAKKRGATAIVRRDVVRLVTPGTLT--EDNLLVSGENN---YLL 134
Query: 143 ALFPNFRENGCTIGLGYVDL-TKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVK 201
+ P E IGL ++D+ TK+++ ++ ++ES L + KE LLP +A+
Sbjct: 135 CVAPGKNE----IGLAWLDISTKKIV-----FTSANPASLESYLAKIEPKEVLLP-DAID 184
Query: 202 SSECKTLRDALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGAL 261
S LR + + + +T R F+ +L D S EI A
Sbjct: 185 SE----LRKVIEQHNIHITRRPNNLFQFDYAANELRGFYNVLQLGFMDARSPCEIV--AC 238
Query: 262 GALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMN 321
GAL++YA + ++Y Y+ LD++ +R L ++ES+T KN SL +++
Sbjct: 239 GALIAYARATQMGELKRLEFPKRYEKGYYLALDASTIRGLELIESQTPGEKN-SLLQVID 297
Query: 322 RTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLM 381
+TCTAG GKRLL ++ PL+ V EI AR D V+ F LR+ +R L I D ER +
Sbjct: 298 QTCTAG-GKRLLKSYIVSPLISVEEIQARQDKVEFFFIQEELRKKVRTELANIPDAERAL 356
Query: 382 HNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPL-ESLTDDDHLN 440
+ R + ++ +RS+L E FS+ ++ Y+ + + DD L
Sbjct: 357 SRIALNRGEPIDCLAVHSC------MRSSLLLAEC-FSAFLENGYIRSIYDKCAPDDELM 409
Query: 441 KFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
+ + A + TS ++ +G ++ ++ L L + + I+ L + +
Sbjct: 410 ETLRTAFLPTS---NRKVDGPFL-DPTHHPKLLELNRLSTNADVVINDLLNTYKRNTGI- 464
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQ-FIVLETRKDGVKFTNTKLKKLGDQY 557
+LKL K G+ + PK L ++ FI ++ + +++T +L+ L Q
Sbjct: 465 --NSLKLGKNNLIGYYVEV-----PKSAPLLDSEVFIHRQSLLNNIRYTTLELQNLEAQI 517
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
K E Y+ + EL + + K + ++ELDV+ SFA++A Y RP
Sbjct: 518 AKANENYRKLELELFRELCGKILASEGPLKEMIAAIAELDVIASFAEIAVQ--RKYVRPQ 575
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
++ + ++ + G RHP VE + F+PND + ++TGPNM GKST++RQ
Sbjct: 576 VD--NSNELRISGGRHPFVEQVNA--FVPNDLAFTSAER-VCVLTGPNMAGKSTYLRQNA 630
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ ++AQ+GSFVP D A I V D +F+R+GA D G STFM EM+ETA+I+ AT RS
Sbjct: 631 LITILAQMGSFVPADSAHIGVVDRVFSRIGASDNIAMGKSTFMVEMMETANIVNNATCRS 690
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQM 797
L+I+DE+GRGTST DG +A A+ E+L + + T+FATH++EL L ++
Sbjct: 691 LVILDEVGRGTSTLDGISIAQAVLEYLHDSVNCKTIFATHYNELCDL---------ESKL 741
Query: 798 VGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+ Y S + ++ ++YK+ PG D S+GIH A + PE+++ A E A E
Sbjct: 742 PRMKCY--SIEVKRWRDEVLLMYKIVPGRGDNSYGIHTAMLSGIPEAIIRRATEIAKE 797
>gi|260893758|ref|YP_003239855.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
gi|260865899|gb|ACX53005.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
Length = 865
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 208/582 (35%), Positives = 301/582 (51%), Gaps = 44/582 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I Y + +M LD+A R L + S D ++ +L +++ T T GMG R L W++QPL
Sbjct: 254 ISSYRPEGFMLLDAATRRNLELTRSLADGSRRGTLLEVLDYTLT-GMGGRRLRDWIEQPL 312
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
LD I RL+ V V+ R+++R LK++ DIERL L A + ++ L S
Sbjct: 313 LDPAAIEERLEAVAYLVEQAVEREEIRARLKKMGDIERLASRLSFGLANARDLLSLKDSL 372
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ---LENG 458
I I+ L EG R D LE+L D +L+ ++ D L+ G
Sbjct: 373 ILAGEIKERLSGAEGLLG-----RLRDQLENLDD------IASLIAEAIAPDPPATLQEG 421
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHS-LHKQTASDLDLPVDKALKLDKGTQFGHVFRI 517
+I Y + L+ ++ R H L + A + + K+LK+ FG+ +
Sbjct: 422 G-LIREGYHPEVDRLR----AIRRDAHKYLAELEAKEKERTGIKSLKIGYNRVFGYYIEV 476
Query: 518 TKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVI- 576
TK P + + + +T +F +LK+ + E + + EL +V
Sbjct: 477 TK---PNLHL-VPPDYQRRQTLTQAERFITPELKEYEEMILGAEERLYSLEYELFCQVRD 532
Query: 577 QTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCV 636
Q I ++ A + ++D L S A A Y RP ++ D+ I ++ RHP V
Sbjct: 533 QVQAHLDRILRA-ARAIGQIDALASLAVAALKGN--YVRPRVSSSDI--IRIKEGRHPVV 587
Query: 637 E-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRAS 695
E A NF+PND L IITGPNMGGKST++RQV + +LMAQ+GSFVP A
Sbjct: 588 ERALGPGNFVPNDTWLGGPDKRVAIITGPNMGGKSTYMRQVALIVLMAQIGSFVPAAEAE 647
Query: 696 ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 755
I V D IF RVGA D G STFM EM E +IL AT RSL+++DE+GRGTSTYDG
Sbjct: 648 IGVVDRIFTRVGAADNLYGGQSTFMVEMGECRTILTQATSRSLVVMDEVGRGTSTYDGMS 707
Query: 756 LAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
+A AI E+LV I+A TLF+TH+HELT LA ++ GV N V+ + + +
Sbjct: 708 IARAIVEYLVHRIKAKTLFSTHYHELTDLA----------RLPGVFNLTVA--VREEAGR 755
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
++ LY+V PG D+S+G+HVA A P+ V+ A+E ELE
Sbjct: 756 VSFLYRVLPGKADKSYGLHVAALAGLPKEVIERAKEILEELE 797
>gi|15675890|ref|NP_270064.1| DNA mismatch repair protein MutS [Streptococcus pyogenes SF370]
gi|71911618|ref|YP_283168.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS5005]
gi|410681461|ref|YP_006933863.1| DNA mismatch repair protein MutS [Streptococcus pyogenes A20]
gi|18202683|sp|Q99XL8.1|MUTS_STRP1 RecName: Full=DNA mismatch repair protein MutS
gi|13623126|gb|AAK34785.1| putative DNA mismatch repair protein [Streptococcus pyogenes M1
GAS]
gi|71854400|gb|AAZ52423.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS5005]
gi|395454824|dbj|BAM31163.1| DNA mismatch repair protein [Streptococcus pyogenes M1 476]
gi|409694050|gb|AFV38910.1| DNA mismatch repair protein MutS [Streptococcus pyogenes A20]
Length = 851
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 221/744 (29%), Positives = 367/744 (49%), Gaps = 84/744 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FDSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA +L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STN 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 EDFTPSA-VISDDAKIEVGSKRKR 879
E + S +IS +++E S ++
Sbjct: 785 ETQSRSTEIISVPSQVESSSAVRQ 808
>gi|42528103|ref|NP_973201.1| DNA mismatch repair protein MutS [Treponema denticola ATCC 35405]
gi|48428293|sp|P61672.1|MUTS_TREDE RecName: Full=DNA mismatch repair protein MutS
gi|41819148|gb|AAS13120.1| DNA mismatch repair protein MutS [Treponema denticola ATCC 35405]
Length = 891
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 318/647 (49%), Gaps = 60/647 (9%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E+ P G LL Y E +S I+ Y+ ++ LD + + L +L + D + ++
Sbjct: 242 EVPPA--GLLLQYLEEISGRDISHISGIKIYAESDFVSLDDSTRKNLELLTNLRDNSPSY 299
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SLF +N T TA MG RLL + PL NEI+ RLD V + D +R+ L I
Sbjct: 300 SLFESVNYTKTA-MGTRLLRRRISYPLRSKNEIDKRLDKVNSLFKDGKASAIIRETLSSI 358
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
DIERL + ++ + ++ L QS + S ++ SLI+E+ L+ L+ L
Sbjct: 359 LDIERLSGRIAMQKTHGKDLLALKQS------LNSVIR-----MGSLIEEKKLNFLQ-LN 406
Query: 435 DDDH--LNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHS 486
D++ L + L+E S+D D L +G+ + S DT + +N E LE+ +
Sbjct: 407 DEEKKLLTEIRDLLENSIDDDCTIALNDGKLIKKGFSKKVDTIKNIKENAHEILEKYLDD 466
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
K+T + LK+ G+ ++ + FI + + +FT
Sbjct: 467 ERKKTGIN-------NLKIKYNRMMGYFLEVSLGNISAV----PDYFIRQRSLSNADRFT 515
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK++ D E +KE+ + V + + LA ++ELDV SFA A
Sbjct: 516 TESLKQIEDNINNSEERLIEAEKEVFDEVCTEIGSHHCFLQKLAEEVAELDVNQSFAQAA 575
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSW-------- 657
+TRP++ D G + + G RHP VE +F+PN KL+ G++
Sbjct: 576 --VLHAWTRPELCS-DSGILNITGGRHPVVENHLRAGDFVPNSIKLLSGENSNPEDETIP 632
Query: 658 -FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKSTF+RQ + L+AQ+GSFVP ++A +S D IF RVGA D RG
Sbjct: 633 SFAVITGPNMAGKSTFLRQTALICLLAQIGSFVPAEKAVLSPVDKIFCRVGATDNLARGE 692
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STF+ EM+ETA IL AT SL+I+DE+GRGTS DG +A A+ EHL+ I+A TLFAT
Sbjct: 693 STFLVEMIETAYILNSATRNSLVIMDEVGRGTSMEDGLAIAQAVSEHLLNTIKAKTLFAT 752
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L HE ++ + K+ L KV GA S+GIHVA
Sbjct: 753 HYHELTRLEHEKI-------------INLKLDVLEAEGKIVFLKKVVHGAAGNSYGIHVA 799
Query: 837 EFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDP 883
A P+SV+T A F I + GS+ K S P
Sbjct: 800 GLAGIPQSVLTRAENLLYMRSQFQKERTIQEARPSAQGSEEKTPSSP 846
>gi|386363596|ref|YP_006072927.1| DNA mismatch repair protein MutS [Streptococcus pyogenes Alab49]
gi|350278005|gb|AEQ25373.1| DNA mismatch repair protein MutS [Streptococcus pyogenes Alab49]
Length = 851
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 229/784 (29%), Positives = 380/784 (48%), Gaps = 98/784 (12%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKKAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FDSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEARERQESGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTNSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA +L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITVQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 EDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALER 916
E + S I IS P+ + +A + L F D + ++++ALE
Sbjct: 785 ETQSRSTEI--------------ISVPSQVESSSAVRQEQLSLFGDEE-KAHEIRQALEV 829
Query: 917 VKRM 920
+ M
Sbjct: 830 IDVM 833
>gi|169824440|ref|YP_001692051.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
gi|238687741|sp|B0S1C1.1|MUTS_FINM2 RecName: Full=DNA mismatch repair protein MutS
gi|167831245|dbj|BAG08161.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
Length = 856
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 334/639 (52%), Gaps = 61/639 (9%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
RKY ++ +M +DS ++ L + ++ +KN SLFG++N T T+ MG RLLH +L++PL+
Sbjct: 249 RKYYINEFMEIDSNSVINLEIQKNLYTNSKNGSLFGVLNHTKTS-MGSRLLHSYLERPLM 307
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
D EI R + V+ +D L +L L I D++RL+ L + A + ++ L S
Sbjct: 308 DKEEILIRQNRVEEIFEDYELLVNLENCLDGIYDLDRLIAKLSYKSANAKDLIALKVSIE 367
Query: 403 RLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQ---LENGE 459
++PY+++ L + LI E+ LD L + D L++ S+ D L G
Sbjct: 368 KIPYLKNLLNCNKKNVQ-LIGEK-LDDLRDIYD---------LIDKSIVDDPPVILTEGN 416
Query: 460 YMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITK 519
+I ++ L L+ + + + ++ L + K LK+ + G+ +TK
Sbjct: 417 -LIKPNFSNELDQLRYNRVNGKNELVEYEMSEKDRLGI---KNLKIVFNKKLGYFIDVTK 472
Query: 520 KEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK----KLGDQYQKVLE-EYKNCQKELVNR 574
K+ + + +T + +F +L+ K+ D ++ E EYK + + +
Sbjct: 473 SNLNKVGEDYEKR----QTLTNSSRFKTKQLEAIESKILDSEDEIFELEYKIFED--IRK 526
Query: 575 VIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHP 634
+I S I KS A +++ +DV S A A Y +PDIN + D++ SRHP
Sbjct: 527 IILE--NLSRIKKS-ADLIAIIDVSNSLAKCA--YLNNYIKPDINTYGLIDVL--ESRHP 579
Query: 635 CVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDR 693
VE + FI ND + GK+ Q+ITGPNM GKST++RQV + ++ Q+GSFVP +
Sbjct: 580 IVELSVGQSEFITNDILIGSGKNDIQLITGPNMSGKSTYLRQVALICILNQIGSFVPATK 639
Query: 694 ASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDG 753
A+IS+ D IF R+G+ D +G STFM EM E ++I+K AT SL+++DE+GRGTSTYDG
Sbjct: 640 ANISIVDKIFTRIGSSDNLFKGESTFMVEMKEMSNIIKYATSNSLLVLDEIGRGTSTYDG 699
Query: 754 FGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTS 813
LAWAI E++ ++I+A TLFATH+HELT L + N N K I T+
Sbjct: 700 LSLAWAIVEYISKDIKAKTLFATHYHELTELEKKLDNLINMK-----------VDIKETN 748
Query: 814 RKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE-----------DFTPS 862
+ L K+ G+ D+S+GI VAE A P++++ A+ E++ DF
Sbjct: 749 DSIIFLRKITRGSTDKSYGIEVAELAGMPKTLIKRAKSILKEIDKEDTKIDLPIADFAVQ 808
Query: 863 AVISDDAKI-EVGSKRKRISDPNDMSRGAARAHQFLKEF 900
+ DD I E+ + I + N ++ Q L E
Sbjct: 809 NEMEDDKNIHELKDFKDEIKNINVNEITPIQSLQLLNEL 847
>gi|448545057|ref|ZP_21625800.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-646]
gi|448547362|ref|ZP_21626840.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-645]
gi|448556280|ref|ZP_21631966.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-644]
gi|445704575|gb|ELZ56487.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-646]
gi|445716373|gb|ELZ68117.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-645]
gi|445716764|gb|ELZ68498.1| DNA mismatch repair protein MutS [Haloferax sp. ATCC BAA-644]
Length = 923
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 230/717 (32%), Positives = 349/717 (48%), Gaps = 77/717 (10%)
Query: 152 GCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDA 211
G T GL VD++ E L T + AL AL E L P E V +C
Sbjct: 164 GDTYGLAVVDVST-----GECL----VTGADRAL-ALEELERLAPAELVVGPDCDLPN-- 211
Query: 212 LTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELL 271
+ + +T F+ D R + P D V A+GA L+YAE
Sbjct: 212 ------LPFDPMETPFEPEAFDADAARETLSAYAPRPDAVVESAAELRAVGAALAYAEYA 265
Query: 272 SDESNYGNYYIRKYSLD--SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
+S Y R D +++LD+ A+R+L + ES++ A +LF +++ A +G
Sbjct: 266 QGDSKL-EYVTRVTRFDPREFLQLDATAIRSLELFESRS-ARAGSTLFSVLDEAACA-LG 322
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
+R L WL++PL+D I ARLD V+A DD R DLR L + D+ERL+ + + RA
Sbjct: 323 RRRLEAWLRRPLVDRERIEARLDAVEALCDDALARADLRDQLSSVYDLERLVARVSRERA 382
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
+ + L + R+P IR +L + + +++ LD LE + D LV +
Sbjct: 383 DARDLRSLKTTLDRVPEIRDSLAGTDSDLLADLRDS-LDELEDVRD---------LVGDA 432
Query: 450 VDLDQ----LENGEYMISSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKAL 503
V D E G +I+ +D L ++ E+ + +L +Q + +D +L
Sbjct: 433 VVSDPPQEITEGG--VIADGFDAELDDVRGTAEAGREWVSNLEAREQERTGID-----SL 485
Query: 504 KLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEE 563
++ G+ +T P + ++ + +T K+ +F +LK+ D+ + +
Sbjct: 486 EVGYNQVHGYYIEVTN---PNL-DRVPDDYQRRQTLKNSERFYTPELKEREDEILRASDC 541
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN---- 619
+ +L V T S +++A L++LDVL + AD+A + Y RP+ +
Sbjct: 542 ADALEYDLFCEVRADVATESARIQAVADALADLDVLRTLADVAVA--NDYARPEFHRNAA 599
Query: 620 ----PPDV-GDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
P D I ++ RHP VE AQD F+PN L RG ++TGPNM GKST++
Sbjct: 600 SSAGPTDEDAGIRIDAGRHPVVERAQD--EFVPNPADLPRGS--VALVTGPNMSGKSTYM 655
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQV + ++AQVG FVP A + V D +F R+GA D G STFM+EM E IL A
Sbjct: 656 RQVALVCVLAQVGGFVPAKSARLPVLDRVFTRIGASDDIAGGQSTFMREMSELTEILHNA 715
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFN 793
T SL+++DE+GRGTST DG +A A E L +E+ A TLFATH+H+LT A +
Sbjct: 716 TGDSLVLLDEVGRGTSTADGLAIARAATEFLHDEVGATTLFATHYHDLTDAADDRE---- 771
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
GV N H +A ++T L+ V G S+G+ VA+ A P SVV AR
Sbjct: 772 -----GVFNLHFTAA--RRDGEVTFLHSVADGPSSSSYGVEVAQLAGVPASVVERAR 821
>gi|379011551|ref|YP_005269363.1| DNA mismatch repair protein MutS1 [Acetobacterium woodii DSM 1030]
gi|375302340|gb|AFA48474.1| DNA mismatch repair protein MutS1 [Acetobacterium woodii DSM 1030]
Length = 881
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 208/612 (33%), Positives = 305/612 (49%), Gaps = 46/612 (7%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E A A GALL Y + +R Y+ + +M LD + R L + ++ +K
Sbjct: 237 EYAIAAAGALLQYLDETQKRVLTHIKTVRYYNSNDFMVLDLSTRRNLELTQTLRTLDKKG 296
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SL G++++T TA MG R L W++ PLL+ I R V+AF + A + + + R+
Sbjct: 297 SLLGVLDKTVTA-MGGRTLRRWVEAPLLNRARILERQGCVEAFFTNAAHLPNFKNIMTRV 355
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
D+ERL L + ++ L QS LP I+ F L+ D L L
Sbjct: 356 YDLERLCGKLSFGTINPKDLLALKQSLSTLPLIKD--------FVELLDS---DKLRHLF 404
Query: 435 D-DDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
D DD L +E S+D + +++G ++I + + + + E + I L Q
Sbjct: 405 DTDDLLTDIWEYIEKSIDDEAPMVIKDG-HVIKTGFHHEIDTFREAAEKGQDWIRELECQ 463
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
+ K LK+ FG+ +TK ++ + +I +T + ++ +L
Sbjct: 464 ERERTGI---KNLKVKYNRIFGYFIEVTKSNIAQVPE----DYIRKQTLANAERYFTPEL 516
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCP 610
K++ ++ E C+ ++ + + + A ++ELD + S A +A +
Sbjct: 517 KEMENKILGAQEGLLRCETQVFQEIRDELLKEIPRVQQKAREVAELDAIYSLASVAIT-- 574
Query: 611 TPYTRPDINPPDVGDIILEGSRHPCVEAQDWV---NFIPNDCKLIRGKSWFQIITGPNMG 667
Y P I + + + RHP VE D V +FI NDC + IITGPNM
Sbjct: 575 NHYVCPQITEDKI--VQIHNGRHPVVE--DMVGNQHFIGNDCTINDDDQRMLIITGPNMA 630
Query: 668 GKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
GKSTFIRQV + L+AQ+GSFVP D ASI V D IF RVGA D G STFM EM E A
Sbjct: 631 GKSTFIRQVAIITLLAQIGSFVPADSASIGVVDRIFTRVGASDDLASGQSTFMVEMTEVA 690
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALA 785
+ILK AT+RSL+I+DE+GRGTST+DG +AWA+ E+L E I A TLFATH+HELT L
Sbjct: 691 NILKNATNRSLVILDEIGRGTSTFDGISIAWAVVEYLHNEDSIGAKTLFATHYHELTELE 750
Query: 786 HENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESV 845
G+ N+ S + T + L K+ PG DQS+GI VA+ A FP +V
Sbjct: 751 TLKP---------GIKNF--SIRLKDTPDGVIFLRKIIPGPADQSYGIEVAKLAGFPVAV 799
Query: 846 VTLAREKAAELE 857
A+E LE
Sbjct: 800 TRRAQEILGHLE 811
>gi|363890562|ref|ZP_09317889.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium CM5]
gi|361964938|gb|EHL17938.1| DNA mismatch repair protein MutS [Eubacteriaceae bacterium CM5]
Length = 851
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 224/730 (30%), Positives = 373/730 (51%), Gaps = 77/730 (10%)
Query: 217 VMLTERKKTEFKTRDLVQDL---DRLVRGSV--EPVRDLVSGFEIAPGALGALLSYAELL 271
+ L + K+ FK ++ + + +V+ + E + + +S +A + +L+ + +
Sbjct: 176 IFLKKLKENSFKNSKIINNFLIENNVVQNTANYENIEEFISDNNLA-DKIPSLIQIYKYV 234
Query: 272 SDESNYG--NYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMG 329
D + N++ K + YM LD ++ L ++ES N +++LF ++N+ T+ MG
Sbjct: 235 YDTQKFFDINFFYEKNQV-KYMSLDYYTIKNLELIES-IRKNNSYTLFWVLNKANTS-MG 291
Query: 330 KRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRA 389
RLL +L +PL D NEI RL+ V +FV+ ++ + L+ + D+ER+ + +
Sbjct: 292 SRLLKQYLLKPLNDENEIRQRLNKVSSFVEHYSVSTGVSHILREVYDLERISNRIVYDTV 351
Query: 390 GLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETS 449
+ ++ L +S L + ++G+ S +E Y E L+ +D L I L+E S
Sbjct: 352 SHRDLLNLKKS---LKAVNEIKNIFKGENDSRFEELY----EVLSKND-LMPIINLIERS 403
Query: 450 VD-LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKG 508
++ + + E++I SSYD L+ + + LE + L K + + K LK+
Sbjct: 404 IEEIGEDFKKEHIIKSSYDEKLAHYR---DLLENTSNILIKMERDEREKTGIKNLKISYN 460
Query: 509 TQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD----------QYQ 558
FG+ ITK + + + +T +F N LKK+ + Q +
Sbjct: 461 KVFGYYIEITKAALQNFN--MPSDYERRQTLVSSERFINNNLKKIEEEMLTARQGESQLE 518
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
VL YK ++EL N F +A M+S++DV + A A Y +P I
Sbjct: 519 SVL--YKEVKEELKN--------FIPKIMQVAEMISQIDVYTALAKTA--IENDYVKPMI 566
Query: 619 NPPDVGDIILEGSRHPCVEA----QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
+ G+I+++ RHP +E +D+V PND L KS IITGPNM GKST++R
Sbjct: 567 STD--GNIVIKNGRHPVIEKLLPNEDYV---PNDTDL--TKSETHIITGPNMAGKSTYMR 619
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
QV + +LMA +GS+VP A I + D I+ R+GA D G STFM EM E ++ILK AT
Sbjct: 620 QVAIIMLMAHIGSYVPASFAQIPIIDSIYTRIGASDDLSMGQSTFMVEMTEVSNILKNAT 679
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNT 794
SLII+DE+GRGTSTYDG LA++I E++ E I+A TL +TH+HELTAL + N
Sbjct: 680 QNSLIILDEIGRGTSTYDGMSLAFSIVEYICEHIKAKTLVSTHYHELTALESKYKN---- 735
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
+ NY + S+++ L K+ G D+S+GIHVA+ A+ P V+ A +
Sbjct: 736 -----IKNY---CMLVDDSKEIKFLRKIVLGKADKSYGIHVAQLADLPYEVLERANIILS 787
Query: 855 ELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEAL 914
+LE ++ K S++ ++S N R Q +K D+ ++ K+A+
Sbjct: 788 KLE----TSEKKSSKKYNQKSEQDQVSIENFSKDNNLRIVQKIK---DLNIDEYTPKQAM 840
Query: 915 ERVKRMKDDL 924
+ + ++K +L
Sbjct: 841 DLLYKIKSEL 850
>gi|86356045|ref|YP_467937.1| DNA mismatch repair protein MutS [Rhizobium etli CFN 42]
gi|123513236|sp|Q2KD76.1|MUTS_RHIEC RecName: Full=DNA mismatch repair protein MutS
gi|86280147|gb|ABC89210.1| DNA mismatch repair protein [Rhizobium etli CFN 42]
Length = 908
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 218/661 (32%), Positives = 318/661 (48%), Gaps = 84/661 (12%)
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A RA L ++N SL ++RT T G G RLL L PL D INARLD +
Sbjct: 300 ATRANLELARTLSGDRNGSLLKAIDRTVTGG-GARLLAERLMSPLTDPARINARLDSIGF 358
Query: 357 FVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQ------------SSIRL 404
+++ +L LR LK + D+ R + L R G + + + Q +S L
Sbjct: 359 LIEEPSLCGKLRDTLKHVPDMPRALSRLALDRGGPRDLWAIRQGLQAAGGLADLLASAML 418
Query: 405 P----YIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
P S LQ +L+ E D L L D + A S +LD++
Sbjct: 419 PEELDQALSGLQALPAGLETLLAETLADELPLLKRDGGFLRDGA----SAELDEVR---- 470
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
AL+++ R I L Q A + + ++LK+ G+ +T
Sbjct: 471 -----------ALRDQSR---RVIAGLQLQYAEETGI---RSLKIKHNNILGYFIEVTAG 513
Query: 521 EEPKIRK--KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
+ + + ++FI +T ++FT T+L L + + + E +R+
Sbjct: 514 NAAPMTETSEAKSRFIHRQTMASAMRFTTTELADLESRIANAADRALTIELEAFDRMTAA 573
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
V +E KS A L+ +DV A LA Y RP ++ + +EG RHP VE
Sbjct: 574 VVAQAESIKSGARALAVIDVAAGLALLAEE--QAYCRPQVDGSKM--FAIEGGRHPVVEQ 629
Query: 639 ----QDWVNFIPNDCKLIR------GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
Q F+ N+C L G W ++TGPNMGGKSTF+RQ + +MAQ+GSF
Sbjct: 630 ALRRQAGGPFVANNCDLSPKTGDKDGAIW--LLTGPNMGGKSTFLRQNALIAIMAQMGSF 687
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VP A I + D +F+RVGA D RG STFM EM+ETA+IL A+DRSL+I+DE+GRGT
Sbjct: 688 VPATSAHIGIVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQASDRSLVILDEIGRGT 747
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
+T+DG +AWA EHL E R LFATHFHELT L+ + N V + V
Sbjct: 748 ATFDGLSIAWAAVEHLHEANRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWDGDV--- 804
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---TPSAVI 865
L++V PGA D+S+GI VA A P SVV AR+ LED P++ +
Sbjct: 805 --------IFLHEVGPGAADRSYGIQVARLAGLPASVVARARDVLTRLEDADRKNPASQL 856
Query: 866 SDDAKI-EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
DD + +V +R+ D +RG ++ + L+ S L+ M +EA++ + +K L
Sbjct: 857 IDDLPLFQVAVRRE------DAARGPSKVEEALRAMS---LDDMTPREAMDALYDLKKKL 907
Query: 925 E 925
+
Sbjct: 908 K 908
>gi|290894466|ref|ZP_06557424.1| DNA mismatch repair protein MutS [Listeria monocytogenes FSL
J2-071]
gi|404407841|ref|YP_006690556.1| DNA mismatch repair protein [Listeria monocytogenes SLCC2376]
gi|290555981|gb|EFD89537.1| DNA mismatch repair protein MutS [Listeria monocytogenes FSL
J2-071]
gi|404241990|emb|CBY63390.1| DNA mismatch repair protein [Listeria monocytogenes SLCC2376]
Length = 860
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 338/650 (52%), Gaps = 48/650 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +YM++D + R L + ES + +L L++ T TA MG R+L W+ +PL+D
Sbjct: 248 YETSNYMKMDYYSKRNLELAESIRGKGRQGTLLWLLDNTQTA-MGGRMLKQWIDRPLIDR 306
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N+I R + V + + R +L ++LK + D+ERL + + +++L S ++
Sbjct: 307 NKIIERQNDVSELMANFFERLELVENLKNVYDLERLAGRVAYGNVNARDLIQLRNSLYQI 366
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P IR+ L + + + + LDP E LT+ K + S + E G +I
Sbjct: 367 PRIRATLLSMNSKSLTELANQ-LDPCEELTE-----KLEEAIMDSAPISIREGG--IIKD 418
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE--- 521
Y++ L ++ + + I L ++ + +L K +K+ FG+ +T+
Sbjct: 419 GYNSQLDTYRDASRNGKTWIAELERK---ERELTGIKTMKVGFNRVFGYYIEVTRANTHL 475
Query: 522 --EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
E + +K +T + ++ +LK+ E+ + +L V +
Sbjct: 476 LPEGRYERK--------QTLTNAERYITPELKEKEKLILDAEEKSMELEYQLFTEVRELV 527
Query: 580 VTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-A 638
+ E + LA +SE+D L SFAD++ + RP ++ + G + ++ RHP VE
Sbjct: 528 KDYIERLQKLAKSVSEIDCLQSFADISEK--NHFIRPTLS--EDGSLHVKQGRHPVVEKV 583
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
+++ NDC L R + +ITGPNM GKST++RQV + + AQVG FVP + A++ +
Sbjct: 584 MGAQSYVANDCDLDRNREIL-LITGPNMSGKSTYMRQVALTAICAQVGCFVPAEEATLPI 642
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF R+GA D + G STFM EMLE + + AT SLI+ DE+GRGT+TYDG LA
Sbjct: 643 FDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLILFDEIGRGTATYDGMALAQ 702
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
AI E++ E + A TLF+TH+HELT L K++ G+ N HVSA ++ K+
Sbjct: 703 AIIEYIHENVHAKTLFSTHYHELTDLE---------KELHGLQNIHVSAVEENG--KVVF 751
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRK 878
L+K++ G D+S+GIHVAE A P+S++ A +LE+ VI++D + E +
Sbjct: 752 LHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLENDDKKIVITNDKQPEEIHEEV 811
Query: 879 RIS----DPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
++S +P + +++ + LKE + M + M +A+ ++ ++ +
Sbjct: 812 QLSMFPVEPE--KKASSKETKLLKEIASMNIMQMTPMDAMNKLYELQSKI 859
>gi|30021861|ref|NP_833492.1| DNA mismatch repair protein MutS [Bacillus cereus ATCC 14579]
gi|44888188|sp|Q81A25.1|MUTS_BACCR RecName: Full=DNA mismatch repair protein MutS
gi|29897417|gb|AAP10693.1| DNA mismatch repair protein mutS [Bacillus cereus ATCC 14579]
Length = 884
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 332/615 (53%), Gaps = 61/615 (9%)
Query: 265 LSYAELLSDESNYGNYYIR--KYSLD-----------SYMRLDSAAMRALNVLESKTDAN 311
+S A+L+ NY IR K SLD +M++D + R L + E+
Sbjct: 209 VSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKE 268
Query: 312 KNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHL 371
K SL L+++T TA MG R+L W+++PL+ I RL++V+ FV+D LR+DL++ L
Sbjct: 269 KTGSLLWLLDKTKTA-MGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKL 327
Query: 372 KRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLE 431
K + D+ERL + + +++L +S +++P I A+ + ++S + + DP E
Sbjct: 328 KEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYASRLIQG-ADPCE 386
Query: 432 SLTDDDHLNKFIALVETSVDLD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLH 488
SLT+ L+ S+ + +++G+ +I Y+ L + ++ + I L
Sbjct: 387 SLTE---------LLGRSIQENPPLSIKDGD-IIKDGYNDKLDQYRYVSKNGKTWIAELE 436
Query: 489 KQTASDLDLPVDKALKLDKGTQFGHVFRITKKE-----EPKIRKKLTTQFIVLETRKDGV 543
K+ + D+ K+LK+ FG+ +TK E + +K +T +
Sbjct: 437 KR---ERDITGIKSLKIGYNRIFGYYIEVTKANLAALPEGRYERK--------QTLANAE 485
Query: 544 KFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFA 603
+F +LK+ + E+ + +L + + F + LA ++SELDVL SFA
Sbjct: 486 RFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFA 545
Query: 604 DLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIIT 662
++ + + + +I ++ RHP VE + ++PNDC + F +IT
Sbjct: 546 TVSEE--EQFVKLVLTTKR--EIFIKDGRHPVVEKVLNGKLYVPNDCIMPEKMDVF-LIT 600
Query: 663 GPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQE 722
GPNM GKST++RQ+ + +M+Q+G FVP A + V D IF R+GA D + G STFM E
Sbjct: 601 GPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVE 660
Query: 723 MLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELT 782
MLE + + A++RSLI+ DE+GRGTSTYDG LA AI EH+ ++I A TLF+TH+HELT
Sbjct: 661 MLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELT 720
Query: 783 ALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFP 842
L E+ ++ N HVSA I+ K+ L+K++ GA D+S+GIHVA+ A P
Sbjct: 721 VL-EESLDQLK--------NVHVSA-IEENG-KVVFLHKIQDGAADKSYGIHVAQLAELP 769
Query: 843 ESVVTLAREKAAELE 857
+S++ A+E A+LE
Sbjct: 770 DSLIARAKEVLAQLE 784
>gi|392393733|ref|YP_006430335.1| DNA mismatch repair protein MutS [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524811|gb|AFM00542.1| DNA mismatch repair protein MutS [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 850
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 240/717 (33%), Positives = 349/717 (48%), Gaps = 79/717 (11%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
GL +VD++ G + + L + E LLP E +KS +
Sbjct: 133 GLAFVDVST---GEFTVFQTQSLDILTTELSRIRPSELLLPAELLKSKHWRP-------- 181
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAELLSDES 275
LT+R+K ++ L+ R+L F A A L Y +L
Sbjct: 182 -YYLTQREKKTYQ--------HTLLEERFTEQRELFQEFPTAMKAANGLWQY--ILETSP 230
Query: 276 NYGNYYIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRL 332
+I K Y + +M LD R L + ES K +L +++ T TA G RL
Sbjct: 231 GIEPSHILKVNAYRPEHWMLLDPWTRRNLELTESIRGQGKKGTLLSVLDFTKTA-FGGRL 289
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQ 392
L W++QPLL +I+ RLD V+A V+D+ LR DL Q ++ D+ERLM + A +
Sbjct: 290 LRRWIEQPLLLKEDIDKRLDYVEALVEDSFLRGDLIQLFSKVFDLERLMGKVSYGTANAR 349
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDL 452
++ L Q+ LP +R+ L EG+ L + ++ LE L D L ++ L
Sbjct: 350 DLLSLSQTLGVLPQLRALLA--EGKSEPL--QAFIPTLEGL---DSL---------ALTL 393
Query: 453 DQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL-----DLPVDKALKLDK 507
+Q N E IS L A +E+ R I S K + L D ++LK+
Sbjct: 394 EQAINPEAPISLRDGNLLKAGYSEEIDELRSISSGGKAWVAKLESMEKDRTGIRSLKVGY 453
Query: 508 GTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLK----KLGDQYQKVLEE 563
FG+ +T I ++I +T + +F +LK K+ +KV +
Sbjct: 454 NKVFGYYIEVTHANSHLI----PPEYIRKQTLANAERFITPELKEYEQKILGAEEKVTQL 509
Query: 564 YKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDV 623
EL +V Q A E SLA E+DV S A+ ++ Y+RP + +
Sbjct: 510 EYQLFLELREKVRQHAARILEAAHSLA----EIDVYTSLAE--AAVRHHYSRP-VMMMEG 562
Query: 624 GDIILEGSRHPCVEA--QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
I+EG RHP VE+ QD +F+PND L K +ITGPNM GKST++RQV + +L
Sbjct: 563 SLTIIEG-RHPVVESMLQD-TSFVPNDTLLTPDKH-LALITGPNMAGKSTYMRQVALIVL 619
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+G FVP +A+I + D IF RVGA D G STFM EM E A IL+ T SLII+
Sbjct: 620 MAQIGCFVPAQQATIPIADHIFTRVGASDDLASGQSTFMVEMYEVAHILRHVTPHSLIIL 679
Query: 742 DELGRGTSTYDGFGLAWAICEHLV-EEIRAPTLFATHFHELTALAHENANEFNTKQMVGV 800
DE+GRGT+TYDG +AWA+ E+L +E + TLFATH+HELT L +A G+
Sbjct: 680 DEVGRGTATYDGLSIAWAVAEYLAGQENKPKTLFATHYHELTDLEETHA---------GI 730
Query: 801 ANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
N HV + ++ L+K+ PG D+S+GI VA+ A P +++ A+ ELE
Sbjct: 731 FNLHVG--VREHGEEIVFLHKIIPGRADRSYGIQVAKLAGLPANLLQRAKIILHELE 785
>gi|424888940|ref|ZP_18312543.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174489|gb|EJC74533.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 908
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 218/661 (32%), Positives = 317/661 (47%), Gaps = 84/661 (12%)
Query: 297 AMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQA 356
A RA L ++N SL ++RT T G G RLL L PL D INARLD +
Sbjct: 300 ATRANLELARTLSGDRNGSLLKAIDRTVTGG-GARLLAERLMSPLTDPARINARLDSIGF 358
Query: 357 FVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQ------------SSIRL 404
+DD +L +LR LK + D+ R + L R G + + + Q +S L
Sbjct: 359 LIDDPSLCGNLRDTLKHVPDMPRALSRLALDRGGPRDLSAIRQGLQAASEVAVMLASAML 418
Query: 405 P----YIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY 460
P S LQ +L+ E D L L D + A S +LD++
Sbjct: 419 PEELGQALSGLQALPAALETLLAETLADELPLLKRDGGFLRDGA----SAELDEVR---- 470
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
AL+++ R I L Q A + + ++LK+ G+ +T
Sbjct: 471 -----------ALRDQSR---RVIAGLQLQYAEETGI---RSLKIKHNNILGYFIEVTAG 513
Query: 521 EEPKIR--KKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
+ + +FI +T ++FT T+L L + + + ++
Sbjct: 514 NASPMTDTAEAKARFIHRQTMASAMRFTTTELADLESRIANAADRALTIELAAFEKMTAA 573
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
V +E+ KS A L+ +DV A LA Y RP ++ + ++G RHP VE
Sbjct: 574 VVAEAEVIKSGARALAVIDVAAGLALLAEE--QAYCRPQVDGSKM--FAIKGGRHPVVEQ 629
Query: 639 ----QDWVNFIPNDCKLIR------GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSF 688
Q F+ N+C L G W ++TGPNMGGKSTF+RQ + ++AQ+GSF
Sbjct: 630 ALRRQAGGPFVANNCDLSPKSGDKDGGIW--LLTGPNMGGKSTFLRQNALISILAQMGSF 687
Query: 689 VPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGT 748
VP A I + D +F+RVGA D RG STFM EM+ETA+IL A+DRSL+I+DE+GRGT
Sbjct: 688 VPATSAHIGIVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQASDRSLVILDEIGRGT 747
Query: 749 STYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAH 808
+T+DG +AWA EHL E R LFATHFHELT L+ + N V + V
Sbjct: 748 ATFDGLSIAWASVEHLHEANRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWDGDV--- 804
Query: 809 IDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF---TPSAVI 865
L++V PGA D+S+GI VA A P SVVT AR+ LED P++ +
Sbjct: 805 --------IFLHEVGPGAADRSYGIQVARLAGLPASVVTRARDVLTRLEDADRKNPASQL 856
Query: 866 SDDAKI-EVGSKRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
DD + +V +R+ D +RG ++ + LK M L+ M +EA++ + +K L
Sbjct: 857 IDDLPLFQVAVRRE------DTARGPSKVEEALK---GMSLDDMTPREAMDALYDLKKKL 907
Query: 925 E 925
+
Sbjct: 908 K 908
>gi|217964450|ref|YP_002350128.1| DNA mismatch repair protein MutS [Listeria monocytogenes HCC23]
gi|386008175|ref|YP_005926453.1| DNA mismatch repair protein [Listeria monocytogenes L99]
gi|386026776|ref|YP_005947552.1| DNA mismatch repair (recognition) [Listeria monocytogenes M7]
gi|254766631|sp|B8DFS4.1|MUTS_LISMH RecName: Full=DNA mismatch repair protein MutS
gi|217333720|gb|ACK39514.1| DNA mismatch repair protein MutS [Listeria monocytogenes HCC23]
gi|307570985|emb|CAR84164.1| DNA mismatch repair protein [Listeria monocytogenes L99]
gi|336023357|gb|AEH92494.1| DNA mismatch repair (recognition) [Listeria monocytogenes M7]
Length = 860
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 338/650 (52%), Gaps = 48/650 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y +YM++D + R L + ES + +L L++ T TA MG R+L W+ +PL+D
Sbjct: 248 YETSNYMKMDYYSKRNLELAESIRGKGRQGTLLWLLDNTQTA-MGGRMLKQWIDRPLIDR 306
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N+I R + V + + R +L ++LK + D+ERL + + +++L S ++
Sbjct: 307 NKIIERQNDVSELMANFFERLELVENLKNVYDLERLAGRVAYGNVNARDLIQLRNSLYQI 366
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISS 464
P IR+ L + + + + LDP E LT+ K + S + E G +I
Sbjct: 367 PRIRATLLSMNSKSLTELANQ-LDPCEELTE-----KLEEAIMDSAPISIREGG--IIKD 418
Query: 465 SYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE--- 521
Y++ L ++ + + I L ++ + +L K +K+ FG+ +T+
Sbjct: 419 GYNSQLDTYRDASRNGKTWIAELERK---ERELTGIKTMKVGFNRVFGYYIEVTRANTHL 475
Query: 522 --EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTA 579
E + +K +T + ++ +LK+ E+ + +L V +
Sbjct: 476 LPEGRYERK--------QTLTNAERYITPELKEKEKLILDAEEKSMELEYQLFTEVRELV 527
Query: 580 VTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-A 638
+ E + LA +SE+D L SFAD++ + RP ++ + G + ++ RHP VE
Sbjct: 528 KDYIERLQKLAKSVSEIDCLQSFADISEK--NHFIRPTLS--EDGSLHVKQGRHPVVEKV 583
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
+++ NDC L R + +ITGPNM GKST++RQV + + AQVG FVP + A++ +
Sbjct: 584 MGAQSYVANDCDLDRNREIL-LITGPNMSGKSTYMRQVALTAICAQVGCFVPAEEATLPI 642
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF R+GA D + G STFM EMLE + + AT SLI+ DE+GRGT+TYDG LA
Sbjct: 643 FDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLILFDEIGRGTATYDGMALAQ 702
Query: 759 AICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
AI E++ E + A TLF+TH+HELT L K++ G+ N HVSA ++ K+
Sbjct: 703 AIIEYIHENVHAKTLFSTHYHELTDLE---------KELHGLQNIHVSAVEENG--KVVF 751
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRK 878
L+K++ G D+S+GIHVAE A P+S++ A +LE+ VI++D + E +
Sbjct: 752 LHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLENDDKKIVITNDKQPEEIHEEV 811
Query: 879 RIS----DPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
++S +P + +++ + LKE + M + M +A+ ++ ++ +
Sbjct: 812 QLSMFPVEPE--KKASSKETKLLKEIASMNIMQMTPMDAMNKLYELQSKI 859
>gi|336434947|ref|ZP_08614666.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_4_56FAA]
gi|336002355|gb|EGN32466.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
1_4_56FAA]
Length = 888
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 215/640 (33%), Positives = 326/640 (50%), Gaps = 59/640 (9%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIR--KYSLDSYMRLDSAAMRALNVLESKT 308
+S ++ + GALL Y LL + N ++ R Y+ YM LDS+ R L + E+
Sbjct: 230 LSDYDCGVLSAGALLQY--LLETQKNDLSHMTRITPYTTGKYMMLDSSTRRNLELCETLR 287
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
+ K SL ++++T TA MG R+L +++QPL++ EI RLD V+ R+++R
Sbjct: 288 EKQKRGSLLWVLDKTKTA-MGARMLRKFIEQPLIEKQEILRRLDAVEELKQSAISREEIR 346
Query: 369 QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY-- 426
++L + D+ERL+ + A + + S LP IR L++ E SSL+K+ Y
Sbjct: 347 EYLSPVYDLERLITRITYGTANPRDLTAFAGSLSMLPPIRYLLEEME---SSLLKDIYAE 403
Query: 427 LDPLESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLER 482
LDPLE L LV+ ++ L E G +I Y+ + L+ + +
Sbjct: 404 LDPLEDLC---------TLVQNAIADEPPLAMKEGG--IIRDGYNEEVDTLRRAKSEGKD 452
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
+ L + + K L++ FG+ +T + + T + +T +
Sbjct: 453 WLAKLEQDEREKTGI---KTLRIKYNKVFGYYLEVTNSYKELVPDYYTRK----QTLANA 505
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
++ +LK+L D ++ + EL + T + ++ A ++ LDV S
Sbjct: 506 ERYITPELKELEDTILGAEDKLYALEYELYCTIRDTIAAEVKRIQTTAKAIASLDVFSSL 565
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQI 660
A +A Y RP IN + G I ++ RHP VE Q N FI ND L K I
Sbjct: 566 ALVAER--NNYVRPKIN--ESGKIDIKDGRHPVVE-QMIPNGTFICNDTLLDDKKQRVSI 620
Query: 661 ITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFM 720
ITGPNM GKST++RQ + +LMAQ+GSFVP +A I + D IF RVGA D G STFM
Sbjct: 621 ITGPNMAGKSTYMRQAALIVLMAQIGSFVPAAKADIGLVDRIFTRVGASDDLASGQSTFM 680
Query: 721 QEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHF 778
EM E A+IL+ AT +SL+I+DE+GRGTST+DG +AWA+ E++ + + A TLFATH+
Sbjct: 681 VEMTEVANILRNATSKSLLILDEIGRGTSTFDGLSIAWAVVEYISDSKLLGAKTLFATHY 740
Query: 779 HELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEF 838
HELT L + N V NY ++ + + L K+ G D+S+GI VA+
Sbjct: 741 HELTELEGKIDN---------VNNYCIA--VKEKGDDIVFLRKIVKGGADKSYGIQVAKL 789
Query: 839 ANFPESVVTLAREKAAEL--EDFTPSAVISDDAKIEVGSK 876
A P+ V+ A+E EL ED T ++I VG K
Sbjct: 790 AGVPDLVIDRAKEIVEELVNEDITIRV-----SEIAVGGK 824
>gi|354557463|ref|ZP_08976721.1| DNA mismatch repair protein mutS [Desulfitobacterium
metallireducens DSM 15288]
gi|353550257|gb|EHC19694.1| DNA mismatch repair protein mutS [Desulfitobacterium
metallireducens DSM 15288]
Length = 849
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 225/712 (31%), Positives = 351/712 (49%), Gaps = 68/712 (9%)
Query: 156 GLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALTRC 215
GL ++D++ G +++ V + L + E +LP E V+ +
Sbjct: 133 GLAFLDVST---GEFTIFENASLDIVLTELSRINPSELVLPPELVRLKHWR--------- 180
Query: 216 GVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGA---LLSYAELLS 272
G +T R + F D+++ E + + FE +P A A L +Y E
Sbjct: 181 GYFITTRDRKSFTQTDIIE----------EQFKKQHALFEESPAAAKAANALWNYLEETL 230
Query: 273 DESNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKR 331
S + I+ Y D +M LD R L + E K +L +++ T TA G R
Sbjct: 231 PGSELTHILEIQTYHPDQWMILDQWTRRNLELTEPLRGQGKKGTLLSVLDFTKTA-FGGR 289
Query: 332 LLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGL 391
LL W++QPLL EI RL+I+ +D+ LR DL Q L I D+ERLM + A
Sbjct: 290 LLRRWIEQPLLSKQEIEHRLNIISDLTEDSFLRGDLAQFLTGIYDLERLMGKVSFGTAHA 349
Query: 392 QQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVD 451
+ ++ L Q+ LP IRS+L F+S E + L LT D L + + E +++
Sbjct: 350 RDLLALKQTLSTLPKIRSSL------FASH-SESLKNYLAHLTGLDELGEEL---ENALN 399
Query: 452 LD---QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKG 508
++ L+ G ++ Y + L+ + + L Q + ++LK+
Sbjct: 400 IEAPLSLKEGN-LLKDGYSPEIDQLRGTSSGGKDWVAQLEAQEKERTGI---RSLKVGYN 455
Query: 509 TQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQ 568
FG+ +T + + ++I +T + +F +LK+ + ++ +
Sbjct: 456 KVFGYYIEVTHANA----QLVPPEYIRKQTLANAERFITPELKEYEQKILGAEDKLIQLE 511
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDI-I 627
+L + +T A L+E+DV +S A++A Y RP+I G I I
Sbjct: 512 YQLFLEIRETVRRHIPQIMDAAHALAEIDVFVSLAEVA--IRHHYVRPEIT--QGGKIQI 567
Query: 628 LEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVG 686
LEG RHP VE + F+PND L R K +ITGPNM GKST++RQV + +LMAQ+G
Sbjct: 568 LEG-RHPVVENMLENGTFVPNDTLLSRSKH-LALITGPNMAGKSTYMRQVALIVLMAQIG 625
Query: 687 SFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGR 746
S++P ++ASIS+ D IF RVGA D G STFM EM E A IL T+ SL+I+DE+GR
Sbjct: 626 SYIPAEKASISIVDHIFTRVGASDDLASGQSTFMVEMREVAYILHHVTEHSLVILDEVGR 685
Query: 747 GTSTYDGFGLAWAICEHLVEE-IRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
GT+T+DG +AWA+ E+L ++ ++ TLFATH+HELT+L + + G+ N HV
Sbjct: 686 GTATFDGLSIAWAVTEYLADQKVKPKTLFATHYHELTSLE---------ESLPGIFNLHV 736
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ + L+K+ G D+S+GI VA+ A P ++ AR ELE
Sbjct: 737 G--VREHGEDIIFLHKIISGRADRSYGIQVAKLAGLPAPLLQRARIILEELE 786
>gi|261878911|ref|ZP_06005338.1| DNA mismatch repair protein MutS [Prevotella bergensis DSM 17361]
gi|270334493|gb|EFA45279.1| DNA mismatch repair protein MutS [Prevotella bergensis DSM 17361]
Length = 888
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 322/634 (50%), Gaps = 51/634 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA++ Y E+ S +++ D Y+R+D +R+L +++ + + SL +
Sbjct: 249 AAGAIMQYLEITQHTSINHITALQRIEEDKYVRMDKFTIRSLELIQPMQEDGR--SLLNI 306
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
++ T T MG RLL W+ PL DV I+ R DIV+ F RQ + + L RI D+ER
Sbjct: 307 LDSTVTP-MGGRLLRRWMVFPLKDVARIHDRQDIVEYFFKQPDFRQVVDEQLHRIGDLER 365
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
++ + R +++V+L + + I+SA Q + + E+ L+ ESL D
Sbjct: 366 IISKVAVGRVSPREVVQLKNALTAIQPIKSACQSADNVSLKRLGEQ-LNLCESLRDR--- 421
Query: 440 NKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPV 499
IA E + D L N +++ + L L++ + + + ++ A +
Sbjct: 422 ---IAH-EINPDPPLLINKGNVMADGCNEELDQLRSISRKGKNFLIEIQQREADSTGI-- 475
Query: 500 DKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQK 559
+LK+ FG+ + + K+ +I +T ++ +LK+ ++
Sbjct: 476 -SSLKVGFNNVFGYYLEVRNT----FKDKVPETWIRKQTLAQAERYITPELKEYEEKILG 530
Query: 560 VLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDIN 619
E+ + L N +I F + A +++ +D LLSFA ++ + Y RP+++
Sbjct: 531 ADEKIIELEMRLFNELILAMQDFIPQIQINANIIAHIDCLLSFAKVSET--NLYVRPEVD 588
Query: 620 PPDVGDIILEGSRHPCVEAQDWV--NFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
D+ DI + RHP +E Q + +++PND L K IITGPNM GKS +RQ
Sbjct: 589 DSDILDI--QQGRHPVIETQMPLGEHYVPNDVYLDTAKQQVMIITGPNMAGKSALLRQTA 646
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ +L+AQ+G FVP +RA + + D IF RVGA D +G STFM EM E ++IL T S
Sbjct: 647 LIVLLAQIGCFVPAERARVGLVDKIFTRVGASDNLSQGESTFMVEMTEASNILNNVTPHS 706
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP--TLFATHFHELTALAHENANEFNTK 795
L++ DELGRGTSTYDG +AWAI E+L E+ +A TLFATH+HEL + K
Sbjct: 707 LVLFDELGRGTSTYDGISIAWAIVEYLHEQPKAQARTLFATHYHELNEME---------K 757
Query: 796 QMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE 855
+ N++VS + K+ L K+ PG + SFGIHVAE A P S+V + +
Sbjct: 758 HFARIKNFNVS--VKEVDGKVIFLRKLMPGGSEHSFGIHVAEIAGMPPSIVRRSNTILKQ 815
Query: 856 LEDFTPSAVISDDAKIEVGSKRK----RISDPND 885
LE +D+A EVGS K R++D D
Sbjct: 816 LE--------ADNA--EVGSVGKPSVERLADSRD 839
>gi|386587200|ref|YP_006083602.1| DNA mismatch repair protein MutS [Streptococcus suis D12]
gi|353739346|gb|AER20354.1| DNA mismatch repair protein MutS [Streptococcus suis D12]
Length = 846
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 214/682 (31%), Positives = 348/682 (51%), Gaps = 79/682 (11%)
Query: 202 SSECKTLRDALTR---CGVMLTERKKTEFKTR-DLVQDLDRLVRGSVEPVRDLVSGFEIA 257
+S C +R+ R G L+E ++ F + +L+ + V V+ + + ++ E A
Sbjct: 159 TSLCGEIRNLRARELVIGYALSEEEEQVFSNQMNLLLSFEDEVTEDVQLIDNSLTDLEKA 218
Query: 258 PGALGALLSYAE--LLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFS 315
A G LLSY + D S+ + Y + Y+++D A +L++LE+ K+ S
Sbjct: 219 --AAGKLLSYLHRTQMRDLSHLQK--VVHYEIKDYLQMDYATKSSLDLLENGRTGKKHGS 274
Query: 316 LFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRIS 375
L+ L++ T TA MG RLL W+ +PL+D+ I R +VQ F+D R DL + LK +
Sbjct: 275 LYWLLDETKTA-MGMRLLRTWIDRPLIDLKRIENRQAVVQVFLDYFFERSDLVEALKGVY 333
Query: 376 DIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQY-EGQFSSLIKERYLDPLESLT 434
DIERL + + + +++L Q+ +P I++ LQQ E +L+ LDP+ L
Sbjct: 334 DIERLASRVSFGKTMPKDLLQLSQTLGNIPAIKNILQQINEPALGNLVAG--LDPIPELH 391
Query: 435 DDDHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALK----------NEQESLE 481
AL+ +++D + + +G +I + +D L + E E+ E
Sbjct: 392 ---------ALISSAIDPEAQGTITDGN-IIRTGFDETLDQYRLVMREGAGWIAEIEAKE 441
Query: 482 RQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD 541
R+ ++ LK+D + G+ F +T + F T K+
Sbjct: 442 REASGINN-------------LKIDYNKKDGYYFHVTNSNLGNV----PDHFFRKATLKN 484
Query: 542 GVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLS 601
++ +L K+ Q + ++ N + E+ R+ Q + + LA ++ +DVL +
Sbjct: 485 SERYGTEELAKIEGQMLEARDKSANLEYEIFMRIRQEVEKYIGRLQKLARTIATIDVLQA 544
Query: 602 FADLASS----CPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKS 656
FA +A CP +T D ++ ++ RH VE +IPN L +
Sbjct: 545 FAVVAEQQHLVCPR-FT-------DQRELTIDRGRHAVVEKVMGKQTYIPNSIHL-NTDT 595
Query: 657 WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
Q+ITGPNM GKST++RQ+ V ++MAQ+GS+VP D+A + + D IF R+GA D + G
Sbjct: 596 HMQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRIGAADDLVSGQ 655
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STFM EM+E ++ ATDRSLI+ DELGRGT+TYDG LA +I E++ ++I A TLFAT
Sbjct: 656 STFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHDKIGAKTLFAT 715
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L ++ + + N HVS ++T L+K+ G D+S+GIHVA
Sbjct: 716 HYHELTDL---------SQTLEHLENVHVSTL--EKDGQVTFLHKIAQGPADKSYGIHVA 764
Query: 837 EFANFPESVVTLAREKAAELED 858
+ A PE ++ A LE+
Sbjct: 765 KIAGMPEELLERADRILQTLEN 786
>gi|331091141|ref|ZP_08339983.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405363|gb|EGG84899.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
2_1_46FAA]
Length = 883
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 213/667 (31%), Positives = 335/667 (50%), Gaps = 67/667 (10%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I Y+ YM LDS+ R L + E+ + K SL ++++T TA MG R L +++QPL
Sbjct: 258 IISYTTGKYMLLDSSTRRNLELCETLREKQKRGSLLWVLDKTKTA-MGARTLRSYVEQPL 316
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
++ +I ARLD V D+ R+++R++L + D+ERL+ + + A + + S
Sbjct: 317 INKEDILARLDAVGELKDNAIAREEIREYLTPVYDLERLISKITYQSANPRDLTAFQSSL 376
Query: 402 IRLPYIRSALQQYEGQF-SSLIKERYLDPLESLTDDDHLNKFIALVETSVD----LDQLE 456
LP+I+ L SL +E LD LE L + LV++++ L E
Sbjct: 377 AMLPHIKYILSDMTSPLLMSLYRE--LDTLEDLCE---------LVQSAIKEEPPLAMKE 425
Query: 457 NGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFR 516
G +I YD + L+N + + + L + + K LK+ FG+
Sbjct: 426 GG--IIKDGYDAEVDKLRNAKTEGKTWLAELEAEEREKTGI---KNLKIKYNKVFGYYLE 480
Query: 517 ITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ--------YQKVLEEYKNCQ 568
+T + + T + +T + ++ +LK+L D Y E Y +
Sbjct: 481 VTNSYKELVPDYYTRK----QTLANAERYIIPRLKELEDTILGAEDKLYALEYEIYCKIR 536
Query: 569 KELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIIL 628
++ + V++ T A ++++DV S A +A Y RP IN V DI
Sbjct: 537 DKIADEVVRIQKT--------AKAIAKIDVFASLALVAER--NNYVRPKINEKGVIDI-- 584
Query: 629 EGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGS 687
+ RHP VE + FI ND L K+ IITGPNM GKST++RQ + +LMAQ+G+
Sbjct: 585 KNGRHPVVEKMIPNDMFIANDTLLDDKKNRVSIITGPNMAGKSTYMRQTALIVLMAQIGT 644
Query: 688 FVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRG 747
FVP + A++ + D IF RVGA D G STFM EM E A+IL+ AT+RSL+I+DE+GRG
Sbjct: 645 FVPAESANVGIVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNATNRSLLILDEIGRG 704
Query: 748 TSTYDGFGLAWAICEHL--VEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHV 805
TST+DG +AWA+ EH+ + + A TLFATH+HELT L ++ V NY +
Sbjct: 705 TSTFDGLSIAWAVVEHISNAKLLGAKTLFATHYHELTELEG---------KIDSVNNYCI 755
Query: 806 SAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVI 865
+ + + L K+ G D+S+GI VA+ A PESV+ A+E +EL + + +
Sbjct: 756 A--VKEKGDDIVFLRKIVKGGADKSYGIQVAKLAGVPESVILRAKEIVSELSEADITTRV 813
Query: 866 SD------DAKIEVGSKRKRISDPNDMSR-GAARAHQFLKEFSDMPLETMDLKEALERVK 918
D ++K K+ D MS + LKE ++ + M +AL +
Sbjct: 814 KDIKIQGQESKARTKQKKYDEVDLAQMSLFDTVKDDDVLKELEELDVSRMTPMDALNTIY 873
Query: 919 RMKDDLE 925
R+++ L+
Sbjct: 874 RLQNKLK 880
>gi|417302906|ref|ZP_12089984.1| DNA mismatch repair protein MutS [Rhodopirellula baltica WH47]
gi|327540783|gb|EGF27349.1| DNA mismatch repair protein MutS [Rhodopirellula baltica WH47]
Length = 891
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 218/681 (32%), Positives = 343/681 (50%), Gaps = 77/681 (11%)
Query: 253 GFE----IAPGALGALLSYAELLSDESNYGNY-YIRK---YSLDSYMRLDSAAMRALNVL 304
GFE +A A GA+L Y + E+ G+ + R ++ +++D+A R+L +
Sbjct: 237 GFEDNGDVAIRAAGAVLCYLK----ETQRGSLDHFRSLTCHNRSPVLQIDAATRRSLEIT 292
Query: 305 ESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALR 364
+ ++ +L G+++RT T MG RLL L PL+D + I R D V FV + LR
Sbjct: 293 RTMRTGSREGALLGVIDRTVTP-MGSRLLADHLAAPLIDADAITYRTDAVDEFVRNNNLR 351
Query: 365 QDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQ-FSSLIK 423
D+R L D+ RL+ + R G + + ++ + LP +++ L + + + L
Sbjct: 352 SDIRTVLGDTYDLTRLLARVATGRTGPRDLRQIAVTLSGLPALKARLAERDSACLTRLES 411
Query: 424 ERYLDP-----LESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQE 478
E +L P LES +D+ ++ D + + G +D+ L L+
Sbjct: 412 ELHLCPELREQLESALNDE-------CPPSAADGNFIREG-------FDSELDTLRELAR 457
Query: 479 SLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLET 538
+R I ++ + + LK+ FG+ ++ + KI FI +T
Sbjct: 458 GGKRWIAEYQQRQMDETGI---ANLKVGYNRVFGYYLEVSNAHKDKI----PADFIRKQT 510
Query: 539 RKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDV 598
K+ ++ +LK+ ++ E+ + ++ L + + I + +A ++ DV
Sbjct: 511 LKNCERYITPELKEYEEKVLAADEKASSREQMLFTLLRENTHKHLAILQEVANAIAMTDV 570
Query: 599 LLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE---AQDWVNFIPNDCKLIRGK 655
+ S A++A+ + RP + V + +EG RHP ++ AQ F+PNDC
Sbjct: 571 VASLAEVAAQ--HHWVRPTLTDDSV--LRIEGGRHPVLDVTMAQG--EFVPNDCNQSPET 624
Query: 656 SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRG 715
+ITGPNM GKST+IRQV + L+AQ GSFVP A I + D IFARVGA D RG
Sbjct: 625 GMILLITGPNMAGKSTYIRQVALITLLAQTGSFVPATSAEIGIADRIFARVGASDELSRG 684
Query: 716 VSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFA 775
STFM EM+ETA IL AT RSL+I+DE+GRGTSTYDG LAWAI EHL E+I A TLFA
Sbjct: 685 QSTFMVEMVETARILNTATSRSLVILDEIGRGTSTYDGLSLAWAITEHLHEQIGARTLFA 744
Query: 776 THFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHV 835
TH+HEL AL + + VAN V+ + ++ L+++ PG+ D+S+GI V
Sbjct: 745 THYHELAAL---------QETLPRVANLSVA--VKEWQDEVVFLHRIVPGSADKSYGIQV 793
Query: 836 AEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMS-RGAARAH 894
A A P V A++ A+LE A R I+ P+ ++ +G+ +
Sbjct: 794 ARLAGIPVEVNERAKDVLAQLE-----------ADHRDSLDRPTIAPPSGVNGKGSGDTY 842
Query: 895 QF-LKEFSDMPL----ETMDL 910
Q L ++D PL ET+D+
Sbjct: 843 QLTLFGYADHPLIQEIETVDI 863
>gi|315658413|ref|ZP_07911285.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
gi|315496742|gb|EFU85065.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
Length = 869
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 305/576 (52%), Gaps = 43/576 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+++Y+ +M++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VKEYAAIDFMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ EI RL+ V ++ R LR +L ++ D+ERL+ + + +++L S
Sbjct: 298 IQQQEIEHRLNAVDQLINAFIERDTLRGYLNQVYDVERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV-DLDQLENGEY 460
+P+I+ L + + FS + L+PL+ L D N + SV D + G
Sbjct: 358 SEIPHIKQLLLEMDQTFSQQFDK--LEPLDDLLDILE-NSIVEEPPISVKDGGLFKRG-- 412
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+ D L A +N + L Q+ + ++ K+LK+ FG+ IT+
Sbjct: 413 -FNQQLDEYLDASQNGKSWLA-QLQAREREKTGI------KSLKISFNKVFGYFIEITRA 464
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRV 575
+ +T + +F +LK+ LG + + V EY +L ++
Sbjct: 465 NLQGFNPT-DYGYHRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----QLFVKL 518
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ T++E + A ++SELD L SFA++A YTRP + + LE SRHP
Sbjct: 519 REHIKTYTEKLQQQAKIISELDCLQSFAEIAQRYN--YTRPQFSENKT--LNLENSRHPV 574
Query: 636 VE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE D +++PNDC L+ +++ +ITGPNM GKST++RQV + +MAQ+GSFVPCD+A
Sbjct: 575 VERVMDHNDYVPNDC-LLNKENFIYLITGPNMSGKSTYMRQVAIISIMAQMGSFVPCDKA 633
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
++ + D IF R+GA D + G STFM EMLE L AT SLII DE+GRGTSTYDG
Sbjct: 634 TLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATADSLIIFDEIGRGTSTYDGL 693
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
LA ++ E++ + A TLF+TH+HELT L E + + N HV+A D
Sbjct: 694 ALAQSMIEYVAKTSHAKTLFSTHYHELTDLDQE---------LSCLKNVHVAA--DEYQG 742
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 743 ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIERAQ 778
>gi|346306310|ref|ZP_08848468.1| DNA mismatch repair protein mutS [Dorea formicigenerans 4_6_53AFAA]
gi|345900115|gb|EGX69943.1| DNA mismatch repair protein mutS [Dorea formicigenerans 4_6_53AFAA]
Length = 880
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 214/677 (31%), Positives = 336/677 (49%), Gaps = 46/677 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL Y + S + Y+ YM LDSA R L + E+ + K SL +
Sbjct: 236 ASGALLIYLKETQKTSLSHMSRLTPYAAGKYMLLDSATRRNLELCETLREKQKRGSLLWV 295
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R L +++QPL+ +I RLD + +D+ R+++R++L I D+ER
Sbjct: 296 LDKTKTA-MGARNLRKYIEQPLVQKYDIEKRLDALNELLDNAISREEIREYLSPIYDLER 354
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + + A + ++ S LP+I+ L + S L+KE Y D D L
Sbjct: 355 LVSKITYQSANPRDMIAFESSLSMLPHIKYILSE---MTSPLLKELY-------EDLDTL 404
Query: 440 NKFIALVETSVDLD----QLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L++ ++ D E G +I Y+ + L++ + + + L
Sbjct: 405 EDLCTLIKDAIKEDPPLAMKEGG--IIRDGYNPEVDKLRSAKSDGKDWLAKLESDEREKT 462
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K LK+ FG+ +T + + T + +T + ++ +LK+L D
Sbjct: 463 GI---KNLKIKYNKVFGYYLEVTNSFKDLVPDYYTRK----QTLANAERYIIPELKELED 515
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
++ + + EL + + + A +++++D L S A +A Y R
Sbjct: 516 TILGAEDKLYSLEYELYSDIRSRVAKDVVRVQKTAKVIAQIDTLASLALVAEQ--NNYVR 573
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
P IN V DI + RHP VE + FI ND L K IITGPNM GKST++R
Sbjct: 574 PKINEKGVIDI--KEGRHPVVEKMIPNDMFISNDTYLNDKKDRIAIITGPNMAGKSTYMR 631
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q + +LMAQ+GSFVP +A I + D IF RVGA D G STFM EM E A+IL+ AT
Sbjct: 632 QTALIVLMAQIGSFVPAAKADIGLVDRIFTRVGASDDLASGQSTFMVEMTEVANILRNAT 691
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEF 792
+SL+I+DE+GRGTST+DG +AWA+ EH+ + A TLFATH+HELT L + N
Sbjct: 692 SKSLLILDEIGRGTSTFDGLSIAWAVIEHISNSKLLGAKTLFATHYHELTELEGKIDN-- 749
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
V NY ++ + + L K+ G D+S+GI VA+ A PESV A+E
Sbjct: 750 -------VNNYCIA--VKENGDDIIFLRKIVKGGADKSYGIQVAKLAGVPESVTDRAKEI 800
Query: 853 AAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGA----ARAHQFLKEFSDMPLETM 908
EL ++ I D A + + + D D+++ + + LKE ++ L +
Sbjct: 801 VEELVQTDITSRIKDIAVLGAPKPKAKKYDDVDLAQMSLFDTVKDDDVLKELKELDLGNL 860
Query: 909 DLKEALERVKRMKDDLE 925
EAL + ++++ L+
Sbjct: 861 TPIEALNTLYQLQNKLK 877
>gi|339009509|ref|ZP_08642081.1| DNA mismatch repair protein MutS [Brevibacillus laterosporus LMG
15441]
gi|338773987|gb|EGP33518.1| DNA mismatch repair protein MutS [Brevibacillus laterosporus LMG
15441]
Length = 913
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 310/600 (51%), Gaps = 33/600 (5%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A+ LL Y + ++ Y D ++++D + R L + E+ D +K SL L
Sbjct: 224 AMNGLLHYVGTTQKRALTHMRSLQHYVADEFLQMDHFSRRNLELTETIRDKSKKGSLLWL 283
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG RLL W+++PLL+ EI R D V+AF D LR D+R+ L R+ D+ER
Sbjct: 284 LDKTETA-MGGRLLRRWIERPLLNPEEIGNRYDTVEAFRHDLLLRSDVREGLDRVYDLER 342
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L + A + +V+L S +P + L Q LI + D +
Sbjct: 343 LAGRISYGNANAKDLVQLRHSLEAIPSVIDLLVNSGEQALQLIAS-------DMDDCGDI 395
Query: 440 NKFIALVETSVDLDQLENGE-YMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
+F++ ET V+ + E +I YD L L+ + I L K S+ +L
Sbjct: 396 AQFLS--ETLVEDPPVSVREGNLIQDGYDEYLDKLRLASRQGKGWIAQLEK---SERELT 450
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
++LK+ FG+ ++K I ++ +T + ++ +LK+
Sbjct: 451 GIRSLKVGFNKVFGYYIEVSKANLAHIPPG---RYERKQTLTNAERYVTPELKEKEALIL 507
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
+ E+ + +L ++ ++LA ++ +DVL +FA ++ +TRP +
Sbjct: 508 EAEEKLVELEYQLFTQIRLEVAKHIPRIQNLAERIARIDVLQAFATVSEE--RSFTRPTL 565
Query: 619 NPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
G++ ++ RH VEA + ++ ND + + +ITGPNM GKST++RQ+
Sbjct: 566 TTD--GEVYVKDGRHAVVEAVLNQEKYVANDVTMNQKDRNILLITGPNMAGKSTYMRQMA 623
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ +MAQ+G FVP A IS+ D IF R+GA D + G STFM EMLET + L AT RS
Sbjct: 624 LITVMAQIGCFVPASEARISLVDQIFTRIGAADDLVGGFSTFMVEMLETRNALVKATPRS 683
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQM 797
LI++DE+GRGTSTYDG LA A+ E++ E I A TLF+TH+HELT L +++
Sbjct: 684 LILLDEIGRGTSTYDGMALAQAVIEYIHEHIGAKTLFSTHYHELTDL---------EEKI 734
Query: 798 VGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
GV N H A + KL L+K+E G D+S+GIHVAE A P V++ ARE LE
Sbjct: 735 PGVVNVH--ARCEERDGKLLFLHKIEEGRADKSYGIHVAELAEMPLEVISRAREILQGLE 792
>gi|77408124|ref|ZP_00784870.1| DNA mismatch repair protein MutS [Streptococcus agalactiae COH1]
gi|421147491|ref|ZP_15607178.1| DNA mismatch repair protein MutS [Streptococcus agalactiae GB00112]
gi|77173224|gb|EAO76347.1| DNA mismatch repair protein MutS [Streptococcus agalactiae COH1]
gi|401685845|gb|EJS81838.1| DNA mismatch repair protein MutS [Streptococcus agalactiae GB00112]
Length = 858
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 307/578 (53%), Gaps = 41/578 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y + Y+++ A +L++LE+ + K+ SL+ L++ T TA MG R+L W+ +PL+ +
Sbjct: 245 YEIKDYLQMSYATKNSLDLLENARTSKKHGSLYWLLDETKTA-MGTRMLRTWIDRPLVSM 303
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I R DI+Q F+D R DL + LK + DIERL + +A + +++L Q+ ++
Sbjct: 304 NRIKERQDIIQVFLDYFFERNDLTESLKGVYDIERLASRVSFGKANPKDLLQLGQTLSQI 363
Query: 405 PYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMI 462
P I+ LQ + +I + + LESL +N IA + + G +I
Sbjct: 364 PRIKMILQSFNQPELDIIVNKIDTMPELESL-----INTAIAPEAQAT----ITEGN-II 413
Query: 463 SSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
S +D L + I + ++ AS + LK+D + G+ F +T
Sbjct: 414 KSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG-----TLKIDYNKKDGYYFHVTNS 468
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ + F T K+ ++ +L K+ + + E+ N + ++ RV
Sbjct: 469 NLSLVPE----HFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQD 640
++ + + LA ++ +DVL S A +A + Y RP N D I ++ RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAENHH--YVRPKFN--DEHQIKIKNGRHATVEKVM 580
Query: 641 WVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
V +IPN ++ Q+ITGPNM GKST++RQ+ + ++MAQ+G FV D + V
Sbjct: 581 GVQEYIPNSI-YFDSQTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D + G STFM EM+E +K A+D+SLI+ DELGRGT+TYDG LA +
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 760 ICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTML 819
I E++ + +RA T+FATH+HELT L ++Q+ + N HV+ ++T L
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDL---------SEQLTRLVNVHVATL--ERDGEVTFL 748
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+K+EPG D+S+GIHVA+ A P ++ A + ++LE
Sbjct: 749 HKIEPGPADKSYGIHVAKIAGLPIDLLDRATDILSQLE 786
>gi|221633094|ref|YP_002522319.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
gi|221157200|gb|ACM06327.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
Length = 884
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 200/579 (34%), Positives = 300/579 (51%), Gaps = 44/579 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y DS+M LD+ R L +LES + SL +++RT T MG RLL WL QPLLDV
Sbjct: 279 YQTDSFMTLDAVTRRNLELLES-ARGERAHSLVSVLDRTETP-MGARLLRRWLSQPLLDV 336
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
I R + V A V++T +R L L ++D+ERL + + +++ +L S RL
Sbjct: 337 GAIRQRQERVAALVEETLVRARLGILLAGVADLERLANRVLTGHVTPRELRQLGHSLARL 396
Query: 405 PYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENGEYM 461
P I + G+ L PL +L D L L+E+++ D L G ++
Sbjct: 397 PEI----AEIAGRRPELA------PLSALPD---LLPAARLIESAIVEDPPPSLGQG-HV 442
Query: 462 ISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKE 521
I + + L L+ S I SL ++ + ++LK+ FG+ ++
Sbjct: 443 IRAGFAPELDELRERARSAREWIASLEQRERERTGI---RSLKVGYNKVFGYYIEVSHAN 499
Query: 522 EPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVT 581
R + + +T ++ +L++ + E ++E+ RV++ +
Sbjct: 500 ----RHLVPPDYQRKQTLVGAERYVTPELREFESMVLQAEERIAALEEEVYRRVVKELAS 555
Query: 582 FSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-D 640
+ + A +++ELDV + A++A Y RP ++ V +I G RHP VE +
Sbjct: 556 CAAQIRRAAQLVAELDVYRALAEVA--VDRRYVRPVVDESTVLEI--RGGRHPVVETTLE 611
Query: 641 WVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
F+ ND +L I+TGPNM GKSTF+RQV + +L+AQVGSFVP + A I + D
Sbjct: 612 AGRFVSNDARLDTESDQIVILTGPNMAGKSTFLRQVALIVLLAQVGSFVPAEFARIGLVD 671
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
IF R+GA D G STFM EM+ETASIL+ AT RSL+++DE+GRGTSTYDG +A A+
Sbjct: 672 RIFTRIGAQDDIAAGQSTFMVEMVETASILRQATLRSLVVLDEVGRGTSTYDGLAIARAV 731
Query: 761 CEHLVEEIR--APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTM 818
E+L R TLFATH+HELT L + + V NY + + ++
Sbjct: 732 VEYLHNHPRLGCRTLFATHYHELTEL---------ERVLPRVRNYRMD--VLEEGDRVVF 780
Query: 819 LYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
L++V G D+S+GIHVA+ A P +VV ARE ELE
Sbjct: 781 LHRVVRGGADKSYGIHVAQLAGLPHAVVRRAREILQELE 819
>gi|226312963|ref|YP_002772857.1| DNA mismatch repair protein MutS [Brevibacillus brevis NBRC 100599]
gi|254766617|sp|C0ZEZ4.1|MUTS_BREBN RecName: Full=DNA mismatch repair protein MutS
gi|226095911|dbj|BAH44353.1| DNA mismatch repair protein MutS [Brevibacillus brevis NBRC 100599]
Length = 862
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 197/600 (32%), Positives = 308/600 (51%), Gaps = 31/600 (5%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
A+ ALL Y S +++Y Y+++D + R L + E+ D K SL
Sbjct: 218 AAVNALLFYIGTTQKRSLAHMRLLKQYDAKQYLQMDGFSRRNLELTETIRDKTKKGSLLW 277
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
L++RT TA MG RLL W+++PLL +++ ARL V+A D LR DLR L R+ D+E
Sbjct: 278 LLDRTQTA-MGGRLLRRWIERPLLSRDQLEARLSAVEALKGDMLLRSDLRTCLDRVYDLE 336
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDH 438
RL + A + +++L S +P L+QY Q ++ + + ++ D
Sbjct: 337 RLAGRISYGNANARDLIQLRMSLEAVP----ELKQYMIQTNTPVLMELANGMDECAD--I 390
Query: 439 LNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
+N + + E G MI + YD L L + I L + +
Sbjct: 391 VNYLAHALVDDPPISVREGG--MIRTGYDEYLDKLHTASREGKTWIAQLEQGEREATGI- 447
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
++LK+ FG+ I+K I ++ +T + ++ +LK+
Sbjct: 448 --RSLKVGFNKVFGYYIEISKS---NIANVPAGRYERKQTLANAERYITPELKEREALIL 502
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
+ E+ + +L V ++LA ++ +DVL +FA ++ + RP++
Sbjct: 503 EAEEKMIELEYQLFVAVRSEVAKHIPRLQNLAERIASVDVLQAFATVSDE--RGFVRPEL 560
Query: 619 NPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVG 677
+ GD ++ RHP VEA + ++ ND ++ + +ITGPNM GKST++RQ+
Sbjct: 561 --VESGDYVITEGRHPVVEAVLEREKYVANDVEMDQTNRQVLLITGPNMAGKSTYMRQIA 618
Query: 678 VNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRS 737
+ +MAQ+G FVP +A +S+ D IF R+GA D + G STFM EMLET L+ AT +S
Sbjct: 619 LITVMAQIGCFVPAKQAKLSIVDQIFTRIGAADDLVGGHSTFMVEMLETRHALQKATAKS 678
Query: 738 LIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQM 797
LI++DE+GRGTSTYDG LA A+ E++ ++I A TLF+TH+HELT LA + +
Sbjct: 679 LILLDEIGRGTSTYDGMALAQAVIEYICQKIGAKTLFSTHYHELTGLA---------ETL 729
Query: 798 VGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
GV N V+A + KL L+K+E G D+S+GIHVAE A P V+ AR LE
Sbjct: 730 SGVVN--VNARCEEREGKLLFLHKIEEGRADKSYGIHVAELAEMPTWVIERARSILTGLE 787
>gi|339300553|ref|ZP_08649697.1| DNA mismatch repair protein HexA [Streptococcus agalactiae ATCC
13813]
gi|319745995|gb|EFV98277.1| DNA mismatch repair protein HexA [Streptococcus agalactiae ATCC
13813]
Length = 858
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 307/578 (53%), Gaps = 41/578 (7%)
Query: 285 YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDV 344
Y + Y+++ A +L++LE+ + K+ SL+ L++ T TA MG R+L W+ +PL+ +
Sbjct: 245 YEIKDYLQMSYATKNSLDLLENARTSKKHGSLYWLLDETKTA-MGTRMLRTWIDRPLVSM 303
Query: 345 NEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRL 404
N I R DI+Q F+D R DL + LK + DIERL + +A + +++L Q+ ++
Sbjct: 304 NRIKERQDIIQVFLDYFFERNDLTESLKGVYDIERLASRVSFGKANPKDLLQLGQTLSQI 363
Query: 405 PYIRSALQQYEGQFSSLIKERY--LDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMI 462
P I+ LQ + +I + + LESL +N IA + + G +I
Sbjct: 364 PRIKMILQSFNQPELDIIVNKIDTMPELESL-----INTAIAPEAQAT----ITEGN-II 413
Query: 463 SSSYDTGLSALKNEQESLERQIHSLH--KQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
S +D L + I + ++ AS + LK+D + G+ F +T
Sbjct: 414 KSGFDKQLDNYRTVMREGTGWIADIEAKERAASGIG-----TLKIDYNKKDGYYFHVTSS 468
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAV 580
+ + F T K+ ++ +L K+ + + E+ N + ++ RV
Sbjct: 469 NLSLVPE----HFFRKATLKNSERYGTAELAKIEGEMLEAREQSSNLEYDIFMRVRAQVE 524
Query: 581 TFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQD 640
++ + + LA ++ +DVL S A +A + Y RP N D I ++ RH VE
Sbjct: 525 SYIKRLQELAKTIATVDVLQSLAVVAENHH--YVRPKFN--DEHQIKIKNGRHATVEKVM 580
Query: 641 WVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVR 699
V +IPN ++ Q+ITGPNM GKST++RQ+ + ++MAQ+G FV D + V
Sbjct: 581 GVQEYIPNSI-YFDSQTDIQLITGPNMSGKSTYMRQLALTVIMAQMGGFVSADEVDLPVF 639
Query: 700 DCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWA 759
D IF R+GA D + G STFM EM+E +K A+D+SLI+ DELGRGT+TYDG LA +
Sbjct: 640 DAIFTRIGAADDLISGQSTFMVEMMEANQAVKRASDKSLILFDELGRGTATYDGMALAQS 699
Query: 760 ICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTML 819
I E++ + +RA T+FATH+HELT L ++Q+ + N HV+ ++T L
Sbjct: 700 IIEYIHDRVRAKTMFATHYHELTDL---------SEQLTRLVNVHVATL--ERDGEVTFL 748
Query: 820 YKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+K+EPG D+S+GIHVA+ A P ++ A + ++LE
Sbjct: 749 HKIEPGPADKSYGIHVAKIAGLPIDLLDRATDILSQLE 786
>gi|227484985|ref|ZP_03915301.1| possible DNA mismatch repair protein MutS [Anaerococcus
lactolyticus ATCC 51172]
gi|227236982|gb|EEI86997.1| possible DNA mismatch repair protein MutS [Anaerococcus
lactolyticus ATCC 51172]
Length = 869
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 198/608 (32%), Positives = 324/608 (53%), Gaps = 44/608 (7%)
Query: 260 ALGALLSYAELLSDES--NYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
AL LL Y +E + N I K ++ +M ++S + L + + + NK +L
Sbjct: 243 ALANLLDYIYKYYEEKLDHINNIEILK--INEFMEIESNTRKNLELTRNLSTNNKENTLI 300
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
++++ T MG R++H WL++PL+D ++IN RLD+V F +D+ L +++ L + D+
Sbjct: 301 SILDQADTV-MGSRMIHDWLERPLIDRDKINRRLDLVDGFYEDSILSRNVSNLLDSVYDL 359
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL+ + +RA + ++ L S +P ++ L ++LIK L+ L D +
Sbjct: 360 ERLLAKISYKRANARDLISLKNSIKEMPKLKHVLAD---STNNLIKNLGLN----LPDVE 412
Query: 438 HLNKFIALVETSVD---LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
+ + I ++ VD ++ E G +I S YD L LK ++ E + L + +
Sbjct: 413 DIYELIN--KSIVDEPPINITEGG--IIKSQYDKDLDNLKEMADTAEDK---LIEYESKQ 465
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLG 554
+L K LK+ G+ +TK KI + +I +T K+ ++T +L+ +
Sbjct: 466 RELTGIKNLKVIFNKNNGYSIEVTKSNIDKIDQ----SYIRKQTLKNQERYTTEELENIS 521
Query: 555 DQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYT 614
E+ + EL N++++ + + +SL+ M++ +D L SFA +A Y
Sbjct: 522 SLILNGKEKINLLEYELFNKIVENILNSTLRLQSLSKMIANIDSLNSFAKIAHKYS--YC 579
Query: 615 RPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
+P+I + II EG RHP +E D FI ND + + + QIITGPNM GKST++
Sbjct: 580 KPNITESNEISII-EG-RHPVIEINLDENEFIANDTNIGQDDNLIQIITGPNMAGKSTYM 637
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQ+ + I+MAQ+GSFVP A I + D IF R+GA D +G STFM EM E ++I+K +
Sbjct: 638 RQMALIIIMAQIGSFVPAKSAEIGICDKIFTRIGASDNISKGESTFMLEMNEVSNIIKNS 697
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFN 793
T++S +I+DE+GRGTS+ DG +A A+ E+L + + T+FATHFHELT L E N N
Sbjct: 698 TEKSFVILDEVGRGTSSDDGLSIAMALVEYLSKHKKVKTVFATHFHELTVLESELKNVRN 757
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
K I + L L K+ G D+S+GI VA+ + P+ ++ A+
Sbjct: 758 LK-----------IEILEENNNLIFLRKISRGKSDRSYGIEVAKLSGLPDEILENAKNIM 806
Query: 854 AEL--EDF 859
+L EDF
Sbjct: 807 EKLANEDF 814
>gi|323350709|ref|ZP_08086370.1| DNA mismatch repair protein HexA [Streptococcus sanguinis VMC66]
gi|322123129|gb|EFX94820.1| DNA mismatch repair protein HexA [Streptococcus sanguinis VMC66]
Length = 849
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 211/656 (32%), Positives = 331/656 (50%), Gaps = 62/656 (9%)
Query: 283 RKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLL 342
+ Y + ++++D A +L++ E+ K+ SL+ LM+ T TA MG R+L W+++PL+
Sbjct: 242 QHYEIKDFLQMDYATKASLDLTENARSGKKHGSLYWLMDETKTA-MGGRMLRSWIQRPLI 300
Query: 343 DVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSI 402
D I+ R ++V+ F+D R DL + LK + DIERL + + + +++L +
Sbjct: 301 DEARISQRQNVVEVFLDHFFERSDLTESLKGVYDIERLASRVSFGKTNPKDLLQLAATLG 360
Query: 403 RLPYIRSALQQY-EGQFSSLIKERYLDPLESLT---------DDDHLNKFIALVETSVD- 451
+P I++ LQ + LI+ LDP+ L D H+ +++T D
Sbjct: 361 NVPQIKAILQGIGSPHLARLIEG--LDPISELAGLISSAISPDAPHIITEGNIIQTGFDE 418
Query: 452 -LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQ 510
LDQ Y + TG A E E ER + LK+D +
Sbjct: 419 TLDQ-----YRLVLREGTGWIA---ELEVKERANSGISN-------------LKIDYNKK 457
Query: 511 FGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKE 570
G+ F +T + + + F T K+ +F +L ++ + + E+ N + E
Sbjct: 458 DGYYFHVTNSQLAHV----PSHFFRKATLKNSERFGTEELARIEGEMLEAREKSANLEYE 513
Query: 571 LVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEG 630
+ R+ + A + + ++LA L+ +DVL SFA +A RP I E
Sbjct: 514 IFMRIREEAGKYIQRLQALAQTLAAVDVLQSFAAVAEQLHL--VRPVFTAERCLQI--EK 569
Query: 631 SRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFV 689
RH VE ++IPN L+ ++ Q+ITGPNM GKST++RQ+ + ++MAQ+GS+V
Sbjct: 570 GRHAVVEKVMGAQSYIPNSI-LLDQETDIQLITGPNMSGKSTYMRQLAIIVIMAQMGSYV 628
Query: 690 PCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTS 749
P AS+ + D IF R+GA D + G STFM EM+E ++ A++RSLI+ DELGRGT+
Sbjct: 629 PAQSASLPLFDAIFTRIGAADDLVSGQSTFMVEMMEANRAIRQASERSLILFDELGRGTA 688
Query: 750 TYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHI 809
TYDG LA AI EH+ A TLFATH+HELTAL EN+ E + N HV+
Sbjct: 689 TYDGMALAQAIIEHIHHYTGAKTLFATHYHELTAL--ENSLEH-------LENVHVATL- 738
Query: 810 DSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDA 869
++T L+K+EPG D+S+GIHVA+ A PE ++ A + LE S +
Sbjct: 739 -EKDGQVTFLHKIEPGPADKSYGIHVAKIAGLPEKLLERADNILSHLE----SQDTGLGS 793
Query: 870 KIEVGSKRKRISDPNDMSRGA-ARAHQFLKEFSDMPLETMDLKEALERVKRMKDDL 924
++ S+ K+ MS A + L E D+ + M E + V +K L
Sbjct: 794 ELPAASRPKQSQVAEQMSLFAEGTENPILTELRDLDIYNMTPLEVMAAVAELKKKL 849
>gi|338706293|ref|YP_004673061.1| DNA mismatch repair protein MutS [Treponema paraluiscuniculi
Cuniculi A]
gi|335344354|gb|AEH40270.1| DNA mismatch repair protein MutS [Treponema paraluiscuniculi
Cuniculi A]
Length = 900
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 204/614 (33%), Positives = 302/614 (49%), Gaps = 57/614 (9%)
Query: 259 GALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
A GAL++Y E + I +Y + ++ +D A + L +L++ D+ SLF
Sbjct: 236 AAAGALIAYLEETTRHPLSHVSAITRYHIHDFVEIDDATRKNLEILQNLHDSTHAHSLFE 295
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
+N T TA MG RLL WL PL EI RL V F + + LR L + D+E
Sbjct: 296 TLNYTHTA-MGTRLLRYWLHHPLRSQEEIQKRLSAVVFFHHRPHILKALRATLSCVRDVE 354
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDP--LESLTDD 436
RL+ + +A + ++ L +S +R+ L F SL +E P L S D
Sbjct: 355 RLVARVALEKAHGRDLLALKES------LRAILT-----FRSLERESPFPPDLLPSEGDT 403
Query: 437 DHLNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHSLHKQ 490
L + L+E S+ D L +G + S+S D N E L++ + ++
Sbjct: 404 PVLQELYGLLEQSIKEDCPVTLSDGNLIKRGFSASLDELHHVRDNANEILKQYLAEERER 463
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
T LK+ GH ++K + FI + + +FT +L
Sbjct: 464 TGIG-------TLKMKYNRMLGHFLEVSKGHLSAV----PAHFIRRRSLSNADRFTTEQL 512
Query: 551 KKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFAD--LASS 608
+L + + E + ++EL + +T + +++ ++ A +++LDVL SFA L
Sbjct: 513 SELEAKLARAREGLVSFEQELFADIRRTVCSHTQLLRTNAARVAQLDVLQSFAHAALQHG 572
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIPNDCKLIRGKSW----FQIITG 663
P D G + + G RHP VE F+PND L + F +ITG
Sbjct: 573 WSQPVFIKD------GALRITGGRHPVVELHLPSGEFVPNDLTLSSSEHAVLPRFALITG 626
Query: 664 PNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEM 723
PNM GKSTF+RQ + L+AQVGSFVP ++A ++ D IF RVGA D RG STF+ EM
Sbjct: 627 PNMAGKSTFLRQTALICLIAQVGSFVPAEKAELTPVDRIFCRVGAADNLARGESTFLVEM 686
Query: 724 LETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTA 783
ETA IL+ AT SL+I+DE+GRGT+T DG +A A+ E+L+ +RA TLFATH+HEL+
Sbjct: 687 SETAHILRAATRDSLVIMDEVGRGTATEDGLSIAQAVSEYLLHHVRAKTLFATHYHELSR 746
Query: 784 LAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
LAH H+ + T + L KV PG+C S+GI+VA A PE
Sbjct: 747 LAHPRLE-------------HLKLDVLETDNTIVFLKKVTPGSCGSSYGIYVARLAGLPE 793
Query: 844 SVVTLAREKAAELE 857
SV+ A E +L+
Sbjct: 794 SVLARACELLKQLQ 807
>gi|298242708|ref|ZP_06966515.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
gi|297555762|gb|EFH89626.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
Length = 893
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 203/604 (33%), Positives = 306/604 (50%), Gaps = 29/604 (4%)
Query: 257 APGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
A A GA+++Y E +++ ++ Y SYM LD+ R L +L+ + SL
Sbjct: 227 AVAAAGAIVTYLEKMNNGLLALLTGLKSYRTSSYMVLDAHTQRNLELLQGTRSGSVQGSL 286
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
G+++RT T MG R + + QPLLD+NE++ARL V+ + ALR L+ SD
Sbjct: 287 LGVLDRTITP-MGAREMRKTITQPLLDLNELDARLGSVEELFESPALRSRFTMSLQVFSD 345
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
+ER+ + + A +++ L + +P +R L+ E + E D E +
Sbjct: 346 MERIAGRIRQGTAVRNEVLGLRDNLEHVPELRELLRGCEALLLRELAEEMQDCQEVIDLV 405
Query: 437 DHLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLD 496
D AL+ + + + ++G +I YDT L L R + SL +
Sbjct: 406 DR-----ALMRSGEEDEHGDDGR-LIRQGYDTELDELFASIRDSRRWMVSLEGRERERTG 459
Query: 497 LPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 556
+ K+LK+ FG+ ++ K + ++ +T + +F +LK+ +
Sbjct: 460 I---KSLKVGFNKVFGYYIEVSNAN----LKLVPGDYMRKQTLVNAERFITPELKEHEAR 512
Query: 557 YQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRP 616
+E + +K L V++ + A +++ +DVLLSFA +A YTRP
Sbjct: 513 ILSAVERIEEMEKGLYGEVLRQISVYYAQLAHTARLVARVDVLLSFAVVA--VHQGYTRP 570
Query: 617 DINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSW-FQIITGPNMGGKSTFIR 674
+ DI RHP VE A D FIPND ++ + ++TGPNM GKST++R
Sbjct: 571 QLEQGHGIDI--RDGRHPVVEYALDGDVFIPNDTQMEADEGRRIMLLTGPNMAGKSTYLR 628
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
QV + LMAQ+GSFVP +A I V D IF RVGA D G STFM EM ET +IL AT
Sbjct: 629 QVALITLMAQIGSFVPARQARIGVVDRIFTRVGAEDDIAAGKSTFMVEMEETGTILHHAT 688
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNT 794
SL+I+DE+GRGTSTYDG +A A+ EHL ++A TLFATH+HEL ALA E +
Sbjct: 689 PHSLLILDEIGRGTSTYDGLAIARAVVEHLHSRLKARTLFATHYHELAALAEELPHLCVH 748
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
+ + H S + L+KV G+ +S+G+HVA A P S+V A E
Sbjct: 749 AMAISDEDEHAS---------IVFLHKVVEGSAGKSYGVHVARLAGMPMSIVERAEEILY 799
Query: 855 ELED 858
+LE+
Sbjct: 800 QLEE 803
>gi|219850607|ref|YP_002465040.1| DNA mismatch repair protein MutS [Chloroflexus aggregans DSM 9485]
gi|219544866|gb|ACL26604.1| DNA mismatch repair protein MutS [Chloroflexus aggregans DSM 9485]
Length = 968
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 244/764 (31%), Positives = 366/764 (47%), Gaps = 92/764 (12%)
Query: 155 IGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPT-EAVKSSECKTLRDALT 213
+GL Y DL+ AEF+D T +++ L L E L+P EA++ ++ L+
Sbjct: 168 VGLAYADLSTGEFAAAEFVDARALTQLQAELARLRPAEVLVPDDEALRLPNLAPVQARLS 227
Query: 214 RCGVMLT-ERKKTEFKTRDLVQDLD-----RLVRGSVE--------------------PV 247
+ LT E ++ + + LD +G V V
Sbjct: 228 QDLAPLTKEEREVLLPHERVARRLDAPGAASWTQGHVTEWPTWRWELATAASALCEQLAV 287
Query: 248 RDL-VSGFE---IAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNV 303
L V G E +A A GAL+ YA+ + Y+R Y +YM LD R L +
Sbjct: 288 ATLAVCGLEDRPLATRAAGALIQYAQTTQRQRVNQLRYLRVYQTGAYMLLDPQTRRNLEL 347
Query: 304 LESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTAL 363
LES SL G+++RTCTA MG RLL W+ QPL+ + + R V V +T
Sbjct: 348 LESSGRQGAKASLIGVLDRTCTA-MGARLLRRWIAQPLIVLEPLQVRQHAVARLVAETMT 406
Query: 364 RQDLRQHLKRISDIERLMHNLEK--RRAGLQQIVKLYQSSIRLPYIRSALQQY------- 414
R +LR+ L + D+ER ++ + + A + +V+L + +LP I A+
Sbjct: 407 RLELREALAELPDMERALNRIAQGIAVATPRDMVQLRAALRKLPGIAQAIAPLLPDLLAP 466
Query: 415 EGQFSSLIK----ERYLDPLESLTDDDHLNKFIALVETSVDLDQLENG----EYMISSSY 466
E L+ LD LE DDD AL+ +S L E G +I +
Sbjct: 467 EMDGEPLLTFDPCSDVLDLLERALDDDP----PALLGSSNYLRAAEEGGERPRRVIRPGF 522
Query: 467 DTGLSAL----KNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEE 522
D L AL ++ QE ++R ++T ++LK+ FG+ I++ +
Sbjct: 523 DQRLDALIKASRHAQEFIDRLETKERERTGI-------RSLKVGYNQVFGYYIEISRAVD 575
Query: 523 PKIRKKLTTQFIVLETRKDGVKFTNTKLKK----LGDQYQKVLEEYKNCQKELVNRVIQT 578
PK+ + + + +T + ++ +LK L D K+++ ++ + L + + Q
Sbjct: 576 PKL---IPSHYERKQTLVNAERYVTEELKYYEGLLSDARLKLVDLERDIFQRLCDDIQQ- 631
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
+ + T+ + + A + Y +P + V + ++ RHP VE
Sbjct: 632 -----HLDRLRITVAAVARLDALAALAEVAVRGRYVQPTLRTDRV--LRIKQGRHPVVER 684
Query: 639 QDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISV 698
FI ND L IITGPNM GKSTF+RQV + LMAQ+GSFVP D A I +
Sbjct: 685 TLGEPFIGNDVDLDGDNVQILIITGPNMAGKSTFLRQVALITLMAQIGSFVPADEAEIGL 744
Query: 699 RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAW 758
D IF R+GA D G STFM EM ETA++L +T RSLII+DE+GRGTSTYDG +A
Sbjct: 745 VDRIFTRIGAQDDIATGQSTFMVEMTETAALLMQSTPRSLIILDEVGRGTSTYDGMAIAR 804
Query: 759 AICEHLVEEIR--APTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKL 816
A+ E++ E R TLFATH+HELTAL E + V N+H++A ++ R +
Sbjct: 805 AVVEYIHNEPRLGCRTLFATHYHELTALDTE---------LPRVRNFHMAA-VERDGR-V 853
Query: 817 TMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFT 860
L+++ PG D+S+GIHVAE A P SV+ A + AELE T
Sbjct: 854 VFLHELRPGGADRSYGIHVAELAGIPASVIRRANDLLAELEGHT 897
>gi|291559008|emb|CBL37808.1| DNA mismatch repair protein MutS [butyrate-producing bacterium
SSC/2]
Length = 875
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 216/680 (31%), Positives = 341/680 (50%), Gaps = 56/680 (8%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GALL Y S +I Y +M +DS++ R L + E+ D K SL +
Sbjct: 239 ATGALLGYLHETQKSSLDHLMHIEAYETSEFMIIDSSSRRNLELCETLRDKQKKGSLLWV 298
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T TA MG R+L ++QPL+D +I R D + D T +R++LR++L I D+ER
Sbjct: 299 LDKTKTA-MGARMLRNMVEQPLVDKKKIEERYDAITTLTDQTIVREELREYLNPIYDLER 357
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
LM + + A + ++ S LP I++ L++ + S ++E LDPLE + +
Sbjct: 358 LMTKVSYKTANPRDMIAFKTSLELLPAIKTVLEECKDPLLSGLRED-LDPLEDIHN---- 412
Query: 440 NKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
L+E S+ L E G +I + + LK + ++ + L ++
Sbjct: 413 -----LLEDSIIEEPPLAIKEGG--IIKEGFKEDIDKLKRAKTEGKQWLMELEEREREKT 465
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
+ K LK+ FG+ +T + + +I +T + ++T +L +L D
Sbjct: 466 GI---KNLKIKFNKVFGYYLDVTNS----YKDLVPDHYIRKQTLANSERYTTEELNQLAD 518
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
+ + E + +T E A +++++D L S A +A + R
Sbjct: 519 TILGSEDRLYALEYETYVMIRETLAGEMERISRTANVIAQIDALASLAYVAER--NHFVR 576
Query: 616 PDINPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFI 673
P +N G I ++ RHP VE Q N FI ND L K+ IITGPNM GKST++
Sbjct: 577 PKLNVR--GTIDIKDGRHPVVE-QVIPNDMFISNDTYLDNKKNRVAIITGPNMAGKSTYM 633
Query: 674 RQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGA 733
RQV + +LMAQ+GSFVP +A+I + D IF R GA D G STFM EM E A+IL+ A
Sbjct: 634 RQVALIVLMAQIGSFVPAAKANIGIVDRIFTRAGASDDLASGQSTFMVEMSEVANILRNA 693
Query: 734 TDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANE 791
T SL+I+DE+GRGTST+DG +AWA+ E++ + A TLFATH+HELT L
Sbjct: 694 TKNSLLILDEIGRGTSTFDGLSIAWAVVEYISNSKLLGAKTLFATHYHELTELE------ 747
Query: 792 FNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLARE 851
++ V NY ++ + + L K+ G D+S+G+ VA+ A P++V+ A+E
Sbjct: 748 ---GKIDSVHNYCIA--VKEQGDDIVFLRKIVKGGADKSYGVQVAKLAGVPDAVINRAKE 802
Query: 852 KAAELEDFTPSAVISDDAKIEVGSKRK----RISDPNDMSRGAARAHQFLKEFSDMPLET 907
A ELE+ ++ D + G ++ R SD M H F+ E + L
Sbjct: 803 IARELEEHDLTSGAKD--IMPYGEAQQLSFFRESDEPTME------HPFMAELREKDLSD 854
Query: 908 MDLKEALERVKRMKDDLEKD 927
M EAL + +++ L+ +
Sbjct: 855 MTPLEALNYLYVLQEKLKNE 874
>gi|418635629|ref|ZP_13198000.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
VCU139]
gi|374841658|gb|EHS05118.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
VCU139]
Length = 869
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 305/576 (52%), Gaps = 43/576 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+++Y+ +M++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VKEYAAIDFMKMDYYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ EI RL+ V ++ R LR +L ++ D+ERL+ + + +++L S
Sbjct: 298 IQQQEIEHRLNAVDQLINAFIERDTLRGYLNQVYDVERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV-DLDQLENGEY 460
+P+I+ L + + FS + L+PL+ L D N + SV D + G
Sbjct: 358 SEIPHIKQLLLEMDQTFSQQFDK--LEPLDDLLDILE-NSIVEEPPISVKDGGLFKRG-- 412
Query: 461 MISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKK 520
+ D L A +N + L Q+ + ++ K+LK+ FG+ IT+
Sbjct: 413 -FNQQLDEYLDASQNGKSWLA-QLQAREREKTGI------KSLKISFNKVFGYFIEITRA 464
Query: 521 EEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKVLEEYKNCQKELVNRV 575
+ +T + +F +LK+ LG + + V EY +L ++
Sbjct: 465 NLQGFNPT-DYGYHRKQTLSNAERFITDELKEKEDIILGAEDKAVELEY-----QLFVKL 518
Query: 576 IQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPC 635
+ T++E + A ++SELD L SFA++A YTRP + + LE SRHP
Sbjct: 519 REHIKTYTEKLQQQAKIISELDCLQSFAEIAQRYN--YTRPQFSENKT--LNLENSRHPV 574
Query: 636 VE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRA 694
VE D +++PNDC L+ +++ +ITGPNM GKST++RQV + +MAQ+GSFVPCD+A
Sbjct: 575 VERVMDHNDYVPNDC-LLNKENFIYLITGPNMSGKSTYMRQVAIISIMAQMGSFVPCDKA 633
Query: 695 SISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGF 754
++ + D IF R+GA D + G STFM EMLE L AT SLII DE+GRGTSTYDG
Sbjct: 634 TLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATADSLIIFDEIGRGTSTYDGL 693
Query: 755 GLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSR 814
LA ++ E++ + A TLF+TH+HELT L E + + N HV+A D
Sbjct: 694 ALAQSMIEYVAKTSHAKTLFSTHYHELTDLDQE---------LSCLKNVHVAA--DEYQG 742
Query: 815 KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+L L+KV+ GA D S+GI VA+ A+ P V+ A+
Sbjct: 743 ELIFLHKVKDGAVDDSYGIQVAKLADLPNEVIERAQ 778
>gi|317153256|ref|YP_004121304.1| DNA mismatch repair protein MutS [Desulfovibrio aespoeensis Aspo-2]
gi|316943507|gb|ADU62558.1| DNA mismatch repair protein MutS [Desulfovibrio aespoeensis Aspo-2]
Length = 888
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 208/606 (34%), Positives = 304/606 (50%), Gaps = 40/606 (6%)
Query: 260 ALGALLSYAELLS--DESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLF 317
A GALL+Y E ++ G + R +L ++ LD R L + +L+
Sbjct: 236 ACGALLTYLEHTQKCPLTHLGEF--RPLNLGKHLLLDEVTERNLEIFRRLDGRPGKGTLW 293
Query: 318 GLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDI 377
+++RT T MG RLL L+QP D+ I D V D LR DLRQ L + D+
Sbjct: 294 RVLDRTMTP-MGGRLLEARLRQPWRDIVPIEKTQDCVVFLHDRDQLRADLRQALDGVHDL 352
Query: 378 ERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDD 437
ERL + RA + V L QS LP +R+ L + + +K L D
Sbjct: 353 ERLSTRVVLGRATPRDFVALRQSLPMLPKVRALLAGLDLDTAPDVKRLLLK-------WD 405
Query: 438 HLNKFIALVETS-VD-LDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDL 495
+ L+E+S VD L + +D L L E E ++ +LH+Q +L
Sbjct: 406 DMEDLAGLLESSFVDSPPPLITDGGLFRKGFDPRLDELIELNEHGEDKLRTLHQQ---EL 462
Query: 496 DLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGD 555
D LKL FG+ F ++K + ++ FI +T ++ LK++ +
Sbjct: 463 DASSIPKLKLGYNKVFGYYFEVSKA----YKGQVPDHFIRRQTLVGSERYITPALKEMEE 518
Query: 556 QYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTR 615
+ +E K + L + + + F +A ++ LD A+ A + R
Sbjct: 519 RIISASDERKALEHSLFLTLREQVASARSRFLFMADAVAALDYWQGLAEAARI--NEWHR 576
Query: 616 PDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
P+++ D DI +E RHP VE A +IPND ++ R K +ITGPNM GKST +R
Sbjct: 577 PELH--DGLDIDIEAGRHPVVEDAMGRATYIPNDLRMDRDKR-ILLITGPNMAGKSTVLR 633
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
QV + ++MAQ+GSFVP RA + + D +F+RVGA D +G STFM EM ETA IL+ AT
Sbjct: 634 QVAIFVIMAQIGSFVPARRARLGLADRVFSRVGASDNLAQGHSTFMVEMTETARILRQAT 693
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAP--TLFATHFHELTALAHENANEF 792
RSL+I+DE+GRGTSTYDG LAWA+ E L R TLFATH+HELT L
Sbjct: 694 QRSLVILDEIGRGTSTYDGLSLAWAVVEELATRARGGIRTLFATHYHELTGL-------- 745
Query: 793 NTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREK 852
++ G+ N +++ + + L ++ PG D+S+GI VA+ A P+ VV ARE
Sbjct: 746 -EGKIEGLRNLNIA--VKEWKGDIVFLRRLVPGPADRSYGIEVAKLAGVPKPVVDRAREI 802
Query: 853 AAELED 858
A LE+
Sbjct: 803 LANLEE 808
>gi|163783941|ref|ZP_02178911.1| DNA mismatch repair protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159880792|gb|EDP74326.1| DNA mismatch repair protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 868
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 321/612 (52%), Gaps = 53/612 (8%)
Query: 281 YIRK---YSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWL 337
+I+K Y D YMRLD +A + L ++ S N +LF ++N+T T GMGKR L +L
Sbjct: 244 FIKKPSPYREDIYMRLDYSAQKHLELVHSNEG---NVALFNVINKTLT-GMGKRKLRFFL 299
Query: 338 KQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKL 397
PL + +I R + V+ + + LR LR+ LK I DIERL+ + + +V L
Sbjct: 300 LHPLKNKEKIIERQNAVEELIKKSELRNQLREILKDIFDIERLVSKISSNTLNPRDMVAL 359
Query: 398 YQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-----DHLNKFIALVETSVDL 452
+S + L+ YE + +S YL + S +D D L++++ E + +
Sbjct: 360 RESLKK----SQNLKSYENKVNS----TYLKSIFSQIEDFEYLVDKLDRYL---EDNPPI 408
Query: 453 DQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFG 512
L+ G+ +I + L LK +E + + ++ + +LK+ G
Sbjct: 409 -HLKEGK-LIKKGINPYLDELKEIKEKGNKWVKEFQEKERQATGIA---SLKVGFNKVMG 463
Query: 513 HVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELV 572
+ ITK P + K + + +T + +FT +L+ ++ E+ K + E+
Sbjct: 464 YYIEITK---PNL-KFVPPHYKRRQTLSNAERFTTEELQSFEEKILSADEKIKALEYEIF 519
Query: 573 NRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSR 632
+ + S+I A+ + ELD +LS A LA + +P+I + ++ +E
Sbjct: 520 MNLREEVSLISDIIAKTASAIGELDAVLSLAQLA--VEKGWIKPEI--IEGKELYIEEGV 575
Query: 633 HPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD 692
HP + A +F+PN K+ S+F IITGPNM GKSTFIRQ + ++++ +GSF+P
Sbjct: 576 HPVI-ANYNPDFVPNSLKMDEN-SYFHIITGPNMAGKSTFIRQSAILVILSHIGSFIPAR 633
Query: 693 RASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYD 752
+A I V D +F R+G+ D +G+STFM EMLE ++I+ AT S +++DE+GRGTSTYD
Sbjct: 634 KAVIPVFDGVFTRIGSADALAKGLSTFMVEMLEMSNIVSNATKNSFVVLDEVGRGTSTYD 693
Query: 753 GFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDST 812
G LAWAI E+LV+ ++A TLFATH+HELT L E + V NYH+ + +
Sbjct: 694 GLSLAWAISEYLVKNVKAKTLFATHYHELTQLEEE---------LPQVKNYHMHIY-EEG 743
Query: 813 SRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAE-LEDFTPSAVISDDAKI 871
+ + Y+V G ++S+GIHVA+ A + ++ E+A E LE F S + D ++
Sbjct: 744 DKDIKFTYRVLEGFTNKSYGIHVAKLAGIKDEII----ERAYEILEKFENSHELEDIFQV 799
Query: 872 EVGSKRKRISDP 883
E K + P
Sbjct: 800 ENKEFPKVLRQP 811
>gi|21227785|ref|NP_633707.1| DNA mismatch repair protein MutS [Methanosarcina mazei Go1]
gi|452210265|ref|YP_007490379.1| DNA mismatch repair protein MutS [Methanosarcina mazei Tuc01]
gi|44888226|sp|Q8PWA7.1|MUTS_METMA RecName: Full=DNA mismatch repair protein MutS
gi|20906191|gb|AAM31379.1| DNA mismatch repair protein [Methanosarcina mazei Go1]
gi|452100167|gb|AGF97107.1| DNA mismatch repair protein MutS [Methanosarcina mazei Tuc01]
Length = 900
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 232/748 (31%), Positives = 365/748 (48%), Gaps = 71/748 (9%)
Query: 150 ENGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLR 209
E GL ++D++ +F D F + S L + EC+LP +S
Sbjct: 145 EKEMEFGLSFLDISTGEFLTTQFTDSGSFDKLLSELARMKPAECILPPTLYGNS------ 198
Query: 210 DALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAP----------- 258
+L +R + + +VQ+ + G E L F ++
Sbjct: 199 --------VLVDR----LREQTIVQEFAPEISGIEEAGEKLKIHFRVSTLEGMGCEKLEF 246
Query: 259 GALGAL--LSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
G A L YA+ +R YS +M LDS +R L ++++ D + SL
Sbjct: 247 GVYSAWSALEYAKTTQMRDLAHINTLRTYSNTEFMVLDSVTLRNLEIVKNVRDEGDHNSL 306
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
+ ++ T T MG R+L WL +PLL V +IN RLD V+ + LR D+R L + D
Sbjct: 307 YRTLSFTKTP-MGSRILKKWLLKPLLSVEQINHRLDAVEELAGNPLLRYDIRDWLSEVRD 365
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
IERL+ + A + +V L +S +P IR L + G + ++K + L S ++
Sbjct: 366 IERLVGRIVYGNANARDLVALKKSLDAVPSIRDCLLEKAG--AEMLK-GIAEGLASFSEI 422
Query: 437 DHLNKFI--ALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASD 494
+ L K I A+VE + E G MI S + L L++ + ++ I + ++ +
Sbjct: 423 EELAKMIGNAIVEEP-PVSVREGG--MIKSGFSEELDELRDISSNSKQWIAAFQQK---E 476
Query: 495 LDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLG 554
D K+LK+ FG+ +T ++ +I +T + +F +LK+
Sbjct: 477 KDRTGIKSLKIGYNKVFGYYIEVTNANSSQV----PDDYIRKQTMANAERFFTPELKEKE 532
Query: 555 DQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYT 614
++ + E+ + +T S+ + A + LDVL A++A + YT
Sbjct: 533 SLILTANDKAVALEYEIFTEITETLSAHSKELQETAERIGVLDVLADLAEVAEN--NNYT 590
Query: 615 RPDINPPDVGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIR 674
RP + + I++ RHP VE+ F+PND ++ ++ F ++TGPNM GKST++R
Sbjct: 591 RPQLT--EDCKILIRDGRHPVVESTVSGGFVPNDTEMDCKENQFLLVTGPNMAGKSTYMR 648
Query: 675 QVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT 734
Q + +MAQ GSFVP ASI V D +F R+GA D G STFM EM+E A+IL A+
Sbjct: 649 QTALIAIMAQAGSFVPASYASIGVIDQVFTRIGAFDDLASGQSTFMVEMVELANILNNAS 708
Query: 735 DRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE----IRAPTLFATHFHELTALAHENAN 790
+SL+++DE+GRGTSTYDG+ +A A+ E L IRA LFATH+H+LT+L
Sbjct: 709 PKSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVGIRA--LFATHYHQLTSL------ 760
Query: 791 EFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAR 850
+++ V NYH++ + +L L K+ PGA D+S+GIHVA A PE V+ A
Sbjct: 761 ---EEKLKRVKNYHIA--VKEEGHELVFLRKIVPGATDRSYGIHVARLAGVPEKVIERAN 815
Query: 851 EKAAELEDFTPSAVISDDAKIEVGSKRK 878
E ELE +V+ + E G KRK
Sbjct: 816 EILRELER---ESVLEESEDCENGKKRK 840
>gi|422341112|ref|ZP_16422053.1| DNA mismatch repair protein mutS [Treponema denticola F0402]
gi|325474683|gb|EGC77869.1| DNA mismatch repair protein mutS [Treponema denticola F0402]
Length = 894
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 211/613 (34%), Positives = 310/613 (50%), Gaps = 60/613 (9%)
Query: 255 EIAPGALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNF 314
E+ P G LL Y E +S I+ Y+ ++ LD + + L +L + D + ++
Sbjct: 242 EVPPA--GLLLQYLEEISGRDISHISGIKIYAESDFVSLDDSTRKNLELLTNLRDNSPSY 299
Query: 315 SLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRI 374
SLF +N T TA MG RLL + PL NEI+ RLD V + D +R+ L I
Sbjct: 300 SLFESVNYTKTA-MGTRLLRRRISYPLRSKNEIDKRLDKVNSLFKDGKASAIIRETLSSI 358
Query: 375 SDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLT 434
DIERL + ++ + ++ L QS + S ++ SLI+E+ L+ L+ L
Sbjct: 359 LDIERLSGRIAMQKTHGKDLLALKQS------LNSVIR-----MGSLIEEKKLNFLQ-LN 406
Query: 435 DDDH--LNKFIALVETSVDLD---QLENGEYM---ISSSYDTGLSALKNEQESLERQIHS 486
D++ L + L+E S+D D L +G+ + S DT + +N E LE+ +
Sbjct: 407 DEEKKLLTEIRDLLENSIDDDCTIALNDGKLIKKGFSKKVDTIKNIKENAHEILEKYLDD 466
Query: 487 LHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFT 546
K+T + LK+ G+ ++ + FI + + +FT
Sbjct: 467 ERKKTGIN-------NLKIKYNRMMGYFLEVSLGNISAV----PDYFIRQRSLSNADRFT 515
Query: 547 NTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLA 606
LK++ D E +KE+ + V + + LA ++ELDV SFA A
Sbjct: 516 TESLKQIEDNINNSEERLIEAEKEVFDEVCTEIGSHHCFLQKLAEEVAELDVNQSFAQAA 575
Query: 607 SSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWV-NFIPNDCKLIRGKSW-------- 657
+TRP++ D G + + G RHP VE +F+PN +L+ G++
Sbjct: 576 --VLHAWTRPELCG-DSGILNIIGGRHPVVENHLRAGDFVPNSIELLSGENTNPEDETIP 632
Query: 658 -FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGV 716
F +ITGPNM GKSTF+RQ + L+AQ+GSFVP ++A +S D IF RVGA D RG
Sbjct: 633 SFAVITGPNMAGKSTFLRQTALICLLAQIGSFVPAEKAVLSPVDKIFCRVGATDNLARGE 692
Query: 717 STFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFAT 776
STF+ EM+ETA IL AT SL+I+DE+GRGTS DG +A A+ EHL+ I+A TLFAT
Sbjct: 693 STFLVEMIETAYILNSATRNSLVIMDEVGRGTSMEDGLAIAQAVSEHLLNTIKAKTLFAT 752
Query: 777 HFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVA 836
H+HELT L HE ++ + K+ L KV PGA S+GIHVA
Sbjct: 753 HYHELTRLEHEKI-------------INLKLDVLEAEGKIVFLKKVVPGAAGNSYGIHVA 799
Query: 837 EFANFPESVVTLA 849
A P+SV+T A
Sbjct: 800 GLAGIPQSVLTRA 812
>gi|189502159|ref|YP_001957876.1| DNA mismatch repair protein MutS [Candidatus Amoebophilus asiaticus
5a2]
gi|189497600|gb|ACE06147.1| hypothetical protein Aasi_0767 [Candidatus Amoebophilus asiaticus
5a2]
Length = 863
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 218/676 (32%), Positives = 345/676 (51%), Gaps = 54/676 (7%)
Query: 260 ALGALLSYAELLSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGL 319
A GA+L Y E + I + D Y+ LD +R L +L+ + + SL +
Sbjct: 232 ASGAILRYLEETEHKEKKHITSIARIEEDKYVWLDKFTIRNLEILQPQQEGG--VSLIEV 289
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
+++T T MG RL+ WL PL D+ I RLDIV F DT L + Q LK+ISD+ER
Sbjct: 290 LDKTVTP-MGARLMKKWLVLPLKDIQAIQRRLDIVDLFYQDTNLWGSILQELKQISDLER 348
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIK-ERYLDPLESLTDDDH 438
L+ + RA + ++ L ++ I++ LQ E LIK + L E L D
Sbjct: 349 LISKVSVGRATPRDLLALQKALQHTLPIQNYLQTSEHDL--LIKLSQQLHNCEYLAD--- 403
Query: 439 LNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLP 498
K ++ + L L G+ +I D+ L L+ + + L ++ + +
Sbjct: 404 --KIRGTLQDNPPLS-LTQGD-LIREGIDSELDELRKIAYQGKDYLLQLQQKEIKNTGI- 458
Query: 499 VDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQ 558
+LK+ FG+ +T + K+ +I +T + ++ +LK ++
Sbjct: 459 --NSLKIAYNKVFGYYLEVTNVH----KSKVPASWIRKQTLVNAERYVTEELKTYEEKIL 512
Query: 559 KVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDI 618
+ + ++ L +++ +A+ F A +L+++D L+FA A YT+P +
Sbjct: 513 QAESKMLEIEQRLYQQLLDSALEFVPQILQNAKILAQIDCYLTFAQEARKHQ--YTKPIL 570
Query: 619 NPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
+ II++ RHP +E Q V+ ++PND L +ITGPNM GKS +RQV
Sbjct: 571 --ANHKKIIIKNGRHPVIEQQLSVDVSYVPNDIYLDNETQQVIVITGPNMAGKSALLRQV 628
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ +LMAQ+GSFVP +A I + D IF RVGA D G STFM EM ETASI+ +DR
Sbjct: 629 ALIVLMAQIGSFVPASQAEIGLVDKIFTRVGASDNLALGESTFMVEMTETASIMHNLSDR 688
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNT 794
SLI++DE+GRGTSTYDG +AW+I E+L + +A TLFATH+HEL L +
Sbjct: 689 SLIVMDEIGRGTSTYDGISIAWSIIEYLHNHPKYKAKTLFATHYHELNQL---------S 739
Query: 795 KQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAA 854
Q+ V N++V+ + + K+ L K+ G + SFGIHVA+ A P VV A E
Sbjct: 740 DQLERVKNFNVA--VKEVAGKIIFLRKLREGGSEHSFGIHVAQLAGMPTQVVERASEILG 797
Query: 855 ELEDFTPSAVISDDAKIE-VGSKRKRI----SDPNDMSRGAARAHQFLKEFSDMPLETMD 909
LE I + AKI+ + +K ++ +DP+ +A LK+ + ++T+
Sbjct: 798 HLEH--DKKHIENKAKIKTIPAKTYQLALFEADPD-----IEKAKSLLKQ---LDIDTLA 847
Query: 910 LKEALERVKRMKDDLE 925
EAL ++K +++ L+
Sbjct: 848 PIEALLKLKELQESLK 863
>gi|352684318|ref|YP_004896303.1| DNA mismatch repair protein MutS [Acidaminococcus intestini
RyC-MR95]
gi|350278973|gb|AEQ22163.1| DNA mismatch repair protein MutS [Acidaminococcus intestini
RyC-MR95]
Length = 871
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 200/643 (31%), Positives = 325/643 (50%), Gaps = 38/643 (5%)
Query: 288 DSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEI 347
D M LD+ A+R L ++ + D K +L +++ T TA MG RL+ W++ PL D I
Sbjct: 263 DRTMVLDATAIRNLELVRNMKDGTKKGTLLDILDYTATA-MGARLMRQWIESPLYDAARI 321
Query: 348 NARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYI 407
+R V V D+ LR +L + LK+I+D+ER++ +E A + + L + + +P +
Sbjct: 322 TSRQQAVGTLVGDSRLRTELGEALKKITDLERILSRIEVGSANARDMASLRTALLAVPDL 381
Query: 408 RSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYD 467
+ L Y + + R +D E++ D+ L + I E G MI Y+
Sbjct: 382 KRLLAPYRDGLLAKLSSR-IDSHETVLDE--LRRGIV---DDPPFTVREGG--MIRKGYN 433
Query: 468 TGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRK 527
L L + E+ + + + + K LK+ FG+ ++K + ++
Sbjct: 434 AELDELHDIAENNNAWMQDFELRIKEETGI---KNLKVGFNKVFGYYIEVSKGQVSQV-- 488
Query: 528 KLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFK 587
FI +T +G ++ +LK ++ E+ + + L N + +
Sbjct: 489 --PDSFIRKQTLVNGERYIVPELKAFENKILSAKEKIQQLEYYLFNEIRDCVRDELVTIQ 546
Query: 588 SLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQ-DWVNFIP 646
A + ELD + S A ++ Y P ++ D G+II++ RHP VE + F+P
Sbjct: 547 DTARAIGELDAIYSLA--MAAFKGNYVCPRLS--DKGEIIIKDGRHPVVEKLLERELFVP 602
Query: 647 NDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 706
ND L I+TGPNM GKST++RQV + +LM Q+GSF+PC A I+ D IF RV
Sbjct: 603 NDVHLNGTNERLIILTGPNMAGKSTYMRQVALLVLMTQMGSFLPCREAVITPVDRIFTRV 662
Query: 707 GAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVE 766
GA D G STFM EM E A+ILK AT RSLII+DE+GRGTSTYDG +A A+ E++ E
Sbjct: 663 GASDDLATGQSTFMVEMNEVANILKNATSRSLIILDEVGRGTSTYDGMSIARAVVEYINE 722
Query: 767 EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGA 826
+I+A TLFATH+HEL L + F+ G+ NY ++ + + L ++ PG
Sbjct: 723 KIKAKTLFATHYHELIEL----EDLFD-----GIKNYSIA--VKEKGNDVVFLRRIVPGG 771
Query: 827 CDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDM 886
D+S+GIHVA+ A P+ V+ A E LE++ A +S V ++ +D
Sbjct: 772 TDRSYGIHVAKLAGLPKKVLDRADEL---LEEYAAEAPLSHKGTHHVEISKEAATDE--- 825
Query: 887 SRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLEKDAG 929
++G+ + + TM EA+ + ++ ++ +++ G
Sbjct: 826 TQGSLFGDTIRDTLMGLDVMTMTPLEAMNTLYQLAEEAKREGG 868
>gi|56808552|ref|ZP_00366286.1| COG0249: Mismatch repair ATPase (MutS family) [Streptococcus
pyogenes M49 591]
Length = 794
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 220/737 (29%), Positives = 365/737 (49%), Gaps = 84/737 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 77 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 129
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 130 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 172
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 173 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 231
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 232 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 291
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F S ++ ++ ++SL + ++L + T++
Sbjct: 292 PKDLLQLGHTLAQVPYIKAILES----FDSPCVDKLVNDIDSLPELEYL------IRTAI 341
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 342 DPDAPATISEGS-IIRNGFDERLDHYRKVMREGTGWIADIEAKERQESGINN-------- 392
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 393 -----LKIDYNKKDGYYFHVTNSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 443
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA L+ +DVL S A +A + Y RP
Sbjct: 444 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVLQSLAVVAET--NHYIRPQ 501
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 502 FNDNHV--ITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 558
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 559 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 618
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 619 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 669
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
++ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 670 LISLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 727
Query: 857 EDFTPSA-VISDDAKIE 872
E + S +IS +++E
Sbjct: 728 ETQSRSTEIISVPSQVE 744
>gi|419768032|ref|ZP_14294169.1| putative DNA mismatch repair protein MutS [Staphylococcus aureus
subsp. aureus IS-250]
gi|383360953|gb|EID38336.1| putative DNA mismatch repair protein MutS [Staphylococcus aureus
subsp. aureus IS-250]
Length = 598
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 192/547 (35%), Positives = 296/547 (54%), Gaps = 61/547 (11%)
Query: 320 MNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIER 379
M+ T T MG R L W+ +PL++ +IN RL+IV+ F+D R LR HL ++ DIER
Sbjct: 1 MDETKTP-MGARRLKQWIDRPLINKQQINDRLNIVEEFMDRFIERDTLRNHLNQVYDIER 59
Query: 380 LMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHL 439
L+ + + +++L S +P+I++ L + Q ++ KE L+PL+ L
Sbjct: 60 LVGRVSYGNVNARDLIQLKHSISEIPHIKALLNELGAQTTTQFKE--LEPLDDL------ 111
Query: 440 NKFIALVETSV---------DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQ 490
+ ++E S+ D +NG ++ D L A KN + L ++
Sbjct: 112 ---LQILEESLVEEPPISIKDGGLFKNG---FNAQLDEYLEASKNGKTWLAELQAKERER 165
Query: 491 TASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKL 550
T K+LK+ FG+ IT+ + + + +T + +F +L
Sbjct: 166 TGI-------KSLKISFNKVFGYFIEITRANLNNFQPE-AFGYNRKQTLSNAERFITDEL 217
Query: 551 KK-----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADL 605
K+ LG + + V EY EL ++ + T++E + A ++SELD L SFA++
Sbjct: 218 KEKEDIILGAEDKAVELEY-----ELFVKLREHIKTYTERLQKQAKIISELDCLQSFAEI 272
Query: 606 ASSCPTPYTRPDINPPDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGP 664
A Y +P + V + LE SRHP VE D+ +++PNDC L +++ +ITGP
Sbjct: 273 AQKYN--YVKPTFSDDKV--LHLENSRHPVVERVMDYNDYVPNDCHL-DDETFIYLITGP 327
Query: 665 NMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEML 724
NM GKST++RQV + +MAQ+G++VPCD A++ + D IF R+GA D + G STFM EML
Sbjct: 328 NMSGKSTYMRQVAIISIMAQMGAYVPCDSATLPIFDQIFTRIGAADDLVSGKSTFMVEML 387
Query: 725 ETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTAL 784
E L AT+ SLII DE+GRGTSTYDG LA A+ E++ + A TLF+TH+HELT+L
Sbjct: 388 EAQKALTYATENSLIIFDEIGRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSL 447
Query: 785 AHENANEFNTKQMVG-VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPE 843
QM+ + N HV+A + +L L+KV+ GA D S+GI VA+ A+ P
Sbjct: 448 ----------DQMLKCLKNVHVAA--NEYQGELIFLHKVKDGAVDDSYGIQVAKLADLPN 495
Query: 844 SVVTLAR 850
V+ A+
Sbjct: 496 EVIDRAQ 502
>gi|282878840|ref|ZP_06287607.1| DNA mismatch repair protein MutS [Prevotella buccalis ATCC 35310]
gi|281299048|gb|EFA91450.1| DNA mismatch repair protein MutS [Prevotella buccalis ATCC 35310]
Length = 887
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 305/604 (50%), Gaps = 41/604 (6%)
Query: 260 ALGALLSYAELLSDESNYGNYY-IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFG 318
A GA+L Y E+ + +N G+ + + + Y+RLD + +L ++++ + + SL
Sbjct: 249 ASGAILQYLEI-TQHTNIGHITSLARIEEERYVRLDKFTIHSLELIDTMQEGGR--SLLN 305
Query: 319 LMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIE 378
++++T T MG R+L W+ PL DV I RLD+V F D RQ + + +RI D+E
Sbjct: 306 IIDKTITP-MGGRMLRRWMVFPLKDVTPIQQRLDVVDYFFKDPDFRQLVGEQFQRIGDLE 364
Query: 379 RLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD-D 437
R++ + R +++V+L + L +++A + + I E+ L E + D +
Sbjct: 365 RIISKVAVGRVSPREVVQLKNALQALQPVKAACMKASNESLRRIGEQ-LQLCEIIRDRIE 423
Query: 438 HLNKFIALVETSVDLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDL 497
H E D L N +I+ YDT L L+ + + + + ++ +
Sbjct: 424 H--------EIQPDPPLLVNKGGVIADGYDTELDELRQISRNGKDYLIQIQEREVEQTGI 475
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
+LK+ FG+ + + K+ ++ +T ++ +LK ++
Sbjct: 476 A---SLKVGYNNVFGYYLEVRNM----YKDKVPENWVRKQTLAQAERYITEELKAYEEKI 528
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
E + +L +I + + A +++ LD LL FA +A Y RP
Sbjct: 529 LGADERIMMLEDKLFRELIVDMQPYIPQIQLDANLIAHLDCLLGFAQVAEE--NQYVRPQ 586
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN--FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 675
I+ DV DI + RHP +E Q + ++PND L K +ITGPNM GKS +RQ
Sbjct: 587 IDATDVLDI--KQGRHPVIEMQLPLGETYVPNDIYLDTEKQQVMMITGPNMAGKSALLRQ 644
Query: 676 VGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATD 735
+ +L+AQ+G FVP +RA I + D IF RVGA D G STFM EM E A+IL T+
Sbjct: 645 TALIVLLAQIGCFVPAERAKIGLVDKIFTRVGASDNISLGESTFMVEMTEAANILNNVTN 704
Query: 736 RSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFHELTALAHENANEFN 793
RSL++ DELGRGTSTYDG +AWAI E+L E+ RA TLFATH+HEL +
Sbjct: 705 RSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPRARARTLFATHYHELNEM--------- 755
Query: 794 TKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKA 853
K + NY+VS + K+ + K+E G + SFGIHVAE A P S+V A
Sbjct: 756 EKHFPRIHNYNVS--VKEADGKVIFMRKLERGGSEHSFGIHVAEIAGMPRSIVKRANAIL 813
Query: 854 AELE 857
+LE
Sbjct: 814 KQLE 817
>gi|157803980|ref|YP_001492529.1| DNA mismatch repair protein MutS [Rickettsia canadensis str.
McKiel]
gi|166232131|sp|A8EZG1.1|MUTS_RICCK RecName: Full=DNA mismatch repair protein MutS
gi|157785243|gb|ABV73744.1| hypothetical protein A1E_04085 [Rickettsia canadensis str. McKiel]
Length = 891
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 216/689 (31%), Positives = 346/689 (50%), Gaps = 55/689 (7%)
Query: 247 VRDLVSGFEIAPG---ALGALLSYAELLSDESNYGNYYI-RKYSLDSYMRLDSAAMRALN 302
++D+ EI+ G +G++L Y L + + N + I R + SYM +D A R L
Sbjct: 241 MKDIKGIGEISSGQICTIGSILEYLSL-TQKQNIPHLPIPRIINFHSYMAIDVATRRNLE 299
Query: 303 VLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTA 362
++ + +K S+ +N T T G RLL+ +L PL D+ +IN RL+I F + A
Sbjct: 300 IVTNSQGGSKG-SVLSTINHTVTK-QGGRLLYNFLSSPLTDITKINQRLNITDFFYSNPA 357
Query: 363 LRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLI 422
+ +R++LKRISDIER + + R+ ++ + + I+ G
Sbjct: 358 IVSKIREYLKRISDIERCLTRITMNRSSGHDLLSIKYTLETATIIKGVFFDVYGVNLPDF 417
Query: 423 KERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEY--MISSSYDTGLSAL----KNE 476
E+ + PL T ++ L L+E ++ D N +I Y ++ L N
Sbjct: 418 IEKIIKPL---TGNEELYN---LIEATIREDAPHNLNEGGIIKHEYHPKVAQLHDLINNG 471
Query: 477 QESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVL 536
+ +E+ K+T D +LK+ G IT K KI +FI
Sbjct: 472 KLHIEKLRDQYRKETGID-------SLKICHNNVIGLFIDITAKNANKITDP---KFIHR 521
Query: 537 ETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSEL 596
+T + V++T +L+KL + +K L + + + S + LA LS L
Sbjct: 522 QTTVNSVRYTTNELQKLESNLVNAKTLVISLEKALYADICRQVIVKSSYLRMLAISLSRL 581
Query: 597 DVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA---QDWVNFIPNDCKLIR 653
DV +FA +A Y +P+ D+ I++G RHP VE ++ +F+ NDC+L
Sbjct: 582 DVFCNFAYVADE--YDYVKPEFTN-DLSFNIVKG-RHPVVEKALQRESKSFVYNDCRLSE 637
Query: 654 -GKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQ 712
+ W +ITGPNM GKSTF+RQ + +MAQ+GSFVP A I V D IF+R+GA D
Sbjct: 638 FERIW--LITGPNMAGKSTFLRQNAIIAIMAQIGSFVPAKSAKIGVVDKIFSRIGAADDL 695
Query: 713 LRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPT 772
++G STFM EMLET++IL +T SLII+DE+GRGTSTYDG +AW++ E++ ++++
Sbjct: 696 IKGQSTFMAEMLETSAILAQSTKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLKCRC 755
Query: 773 LFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFG 832
LFATH+HELT F + + + NY ++ I+ + + L+ + GA D+S+G
Sbjct: 756 LFATHYHELT---------FMSNFLPALQNYTIA--IEELGKDILFLHNIISGAADRSYG 804
Query: 833 IHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAAR 892
IHVA A P SV+ A + L F ++ I K + ++ S N
Sbjct: 805 IHVAALAGLPASVINRAEQI---LLKFEKTSTIK--GKNILSTESNNFSLFNLKPNKTTI 859
Query: 893 AHQFLKEFSDMPLETMDLKEALERVKRMK 921
+++ +F + + + KEALE + +K
Sbjct: 860 SNKLYAKFRTIDPDKLSPKEALELIYELK 888
>gi|405375426|ref|ZP_11029458.1| DNA mismatch repair protein MutS [Chondromyces apiculatus DSM 436]
gi|397086307|gb|EJJ17430.1| DNA mismatch repair protein MutS [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 922
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 212/625 (33%), Positives = 307/625 (49%), Gaps = 53/625 (8%)
Query: 289 SYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEIN 348
++ +D ++ L VL S D + SL G++++T T+ +G R L WL PL + EI+
Sbjct: 301 GHLLMDESSRANLEVLRSLRDGGRKGSLLGVLDKTVTS-LGARKLARWLASPLGSLPEIH 359
Query: 349 ARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIR 408
ARLD V+ + R++L LK + D+ERL L + + L S +LP +
Sbjct: 360 ARLDAVEELSGRSVWREELASILKEVGDLERLCGRLSLGAGNARDLRALGVSLAQLPRVA 419
Query: 409 SALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLDQLENGEYMISSSYDT 468
+ L + E S+L+K PL +L + L E V L + G MI + Y+
Sbjct: 420 AVLGRCE---SALLKS-LTGPLSALPELAELLSRAVADEPPVTLK--DGG--MIRAGYNA 471
Query: 469 GLS---ALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKI 525
L AL + L QI K+ +LK+ FG+ +TK ++
Sbjct: 472 ELDKLVALSTHGKDLLLQIEQREKERTGI------SSLKVRYNKVFGYYLEVTKSNLDRV 525
Query: 526 RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEI 585
K +I +T + +F +LK+ +Q E + +L + V +
Sbjct: 526 PK----DYIRKQTTVNSERFVTPELKEYEEQVLTAEERRCTLELQLFEELRAKVVAAAPR 581
Query: 586 FKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVE----AQDW 641
+S A ++ D LLSFA A+ YTRP+++ + + + RHP VE A D
Sbjct: 582 IRSAAEAVAAGDSLLSFARCAAE--YGYTRPEVDASEA--LSITAGRHPVVERMLGAGD- 636
Query: 642 VNFIPNDCKLIRGK-SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRD 700
+F+PND +L + + +ITGPNM GKST +RQV + LMAQ GSFVP A I + D
Sbjct: 637 -SFVPNDVRLDPAEDAQLLVITGPNMAGKSTVMRQVALTALMAQAGSFVPAKAARIGLCD 695
Query: 701 CIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAI 760
IF RVGA D RG STFM EM ET+ IL AT++SLII+DE+GRGTST+DG +AWA+
Sbjct: 696 RIFTRVGAADNLARGQSTFMVEMTETSHILHHATNKSLIILDEIGRGTSTFDGLSIAWAV 755
Query: 761 CEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLY 820
EHL + + A LFATH+HEL LA E V N ++ + + K+ L
Sbjct: 756 AEHLHDTVGARALFATHYHELVDLARERTR---------VKNLCIA--VKEQNGKVIFLR 804
Query: 821 KVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRI 880
K+ PG +S+GI VA+ A P VV ARE LE DDA G R +
Sbjct: 805 KLVPGGASRSYGIEVAKLAGLPPEVVGRARELLQNLESGE-----LDDA----GRPRVAV 855
Query: 881 SDPNDMSRGAARAHQFLKEFSDMPL 905
P R A+ + L F P+
Sbjct: 856 RQPQGGRRAASASSGQLGLFGAEPV 880
>gi|374995728|ref|YP_004971227.1| DNA mismatch repair protein MutS [Desulfosporosinus orientis DSM
765]
gi|357214094|gb|AET68712.1| DNA mismatch repair protein MutS [Desulfosporosinus orientis DSM
765]
Length = 850
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 327/650 (50%), Gaps = 51/650 (7%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
I+ Y + +M LD R L + ES K +L +++ T TA G RLL W+ +PL
Sbjct: 241 IKTYRTERWMFLDQWTRRNLELTESLRGVGKKGTLLSVLDLTKTA-FGGRLLRHWIDKPL 299
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
L +EI RLD +Q + D+ LR+DL + L + D+ERLM + A + ++ L Q+
Sbjct: 300 LLQDEIEGRLDSIQELISDSFLRKDLLKLLSEVYDLERLMGKVSYGTANAKDLLSLTQTL 359
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSVDLD---QLENG 458
LP + S L + + K L LE+ F+A ++ +++ L +G
Sbjct: 360 ALLPDLCSLLSSSRAE-TLKTKVPMLGGLET---------FVAKLKNAINPAPPISLRDG 409
Query: 459 EYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRIT 518
+I + Y + L+ + + L + ++LK+ FG+ +T
Sbjct: 410 N-IIKTGYSREVDQLREIASGGKEWLAQLENAERERTGI---RSLKIGYNKIFGYYIEVT 465
Query: 519 KKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQT 578
I K+ + +T + +F +LK + E+ K+ + EL + +
Sbjct: 466 HANAHLIPKEYQRK----QTLANAERFITPELKDYELKIVGAEEKLKDLEYELFLALREE 521
Query: 579 AVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEA 638
++ +A +L+E+DV +S +++A Y RP I + G+I++ RHP VE
Sbjct: 522 VRLQTKRIIQVAQILAEIDVFVSLSEVA--VRNHYVRPQIK--NDGEILITEGRHPVVEE 577
Query: 639 QDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASIS 697
N F+PND L + +ITGPNM GKST++RQV + +LMA +GSFVP A IS
Sbjct: 578 MLEQNLFVPNDTHLSESQH-LALITGPNMAGKSTYMRQVALIVLMAHIGSFVPAKNAGIS 636
Query: 698 VRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLA 757
+ D IF RVGA D G STFM EM E A ILK A+ +SLII+DE+GRGT+TYDG +A
Sbjct: 637 LVDRIFTRVGASDDLAAGQSTFMVEMQEVAHILKYASPKSLIILDEIGRGTATYDGLSIA 696
Query: 758 WAICEHLVE--EIRAPTLFATHFHELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRK 815
WA+ EHLV+ E R TLFATH+HELT L E A G+ N HV +
Sbjct: 697 WAVTEHLVKHPEFRPKTLFATHYHELTQLQDEFA---------GLFNLHVG--VKERGED 745
Query: 816 LTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGS 875
+ L+K+ PG D+S+GI VA A P ++ A+ ELE S + V +
Sbjct: 746 IVFLHKILPGRADRSYGIQVARLAGLPPELLQRAKTLLLELE--------SAEPAHAVPA 797
Query: 876 KRKRISDPNDMSRGAARAHQFLKEFSDMPLETMDLKEALERVKRMKDDLE 925
+++ + + H L+E +PL+ M ++AL+ + +++ ++
Sbjct: 798 PPAKVTQFSLFDE--PQMHPLLQEIELLPLDDMTARQALQYLFDLQERIQ 845
>gi|323703567|ref|ZP_08115212.1| DNA mismatch repair protein MutS [Desulfotomaculum nigrificans DSM
574]
gi|323531470|gb|EGB21364.1| DNA mismatch repair protein MutS [Desulfotomaculum nigrificans DSM
574]
Length = 873
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 216/610 (35%), Positives = 312/610 (51%), Gaps = 52/610 (8%)
Query: 259 GALGALLSYAELLSDESNYGNYY--IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSL 316
GA G LL Y LL + + I Y SYM LD A R L + +S D K SL
Sbjct: 237 GAAGGLLHY--LLETQKRKLQHITEITSYFTQSYMILDGIARRNLEICKSLRDGGKKGSL 294
Query: 317 FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISD 376
+++ T +A MG RLL WL+QPL+D+ IN RLD VQ VD LR +L LK + D
Sbjct: 295 LSVLDLTRSA-MGGRLLKAWLEQPLIDIKAINERLDAVQELVDSVLLRDELATALKNVYD 353
Query: 377 IERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDD 436
+ERL A + ++ L S LP +R AL + S L+K Y D ++L D
Sbjct: 354 MERLTARAAYGSANARDMLALLASLQMLPPLRQALTNCQ---SKLLKRIY-DQFDTLED- 408
Query: 437 DHLNKFIALVETSVDLDQ---LENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTAS 493
L+E+S+ D L +G +I + Y + L+ + + L +
Sbjct: 409 -----LKGLLESSIAEDAPITLRDGG-LIKAGYSQEVDQLRAVARDGKSWLAGLESREKE 462
Query: 494 DLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKK- 552
+ K+LK+ FG+ +TK + + + +T + +F +LK+
Sbjct: 463 KTGI---KSLKVGFNKVFGYYLEVTKANLNLVPEYYQRR----QTLANAERFITPELKEY 515
Query: 553 ----LGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASS 608
LG + + V EY N ++ N Q A S I + A +++++DVL++ A++A+
Sbjct: 516 ESMILGAEDRLVELEY-NLFVDVRN---QVAAEVSRI-QHTALLVAQVDVLVALAEVAAR 570
Query: 609 CPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMG 667
Y RP++N V +I EG RHP VE F+PND + + +ITGPNMG
Sbjct: 571 --QGYVRPEVNNSGVIEIT-EG-RHPVVEINLGPGCFVPNDTYIDTDRHRLALITGPNMG 626
Query: 668 GKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETA 727
GKST+ RQV + +LMAQVGSFVP +ASI + D IFARVGA D G STFM EMLET
Sbjct: 627 GKSTYQRQVALIVLMAQVGSFVPASKASIGIVDRIFARVGASDDLTSGQSTFMVEMLETK 686
Query: 728 SILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHE 787
I+ AT +SL+IIDELGRGTS +G +A A+ E L + + TLF+TH+HEL L
Sbjct: 687 QIMDHATSQSLVIIDELGRGTSNLEGMAIAQAVIEFLHDVVGCRTLFSTHYHELAEL--- 743
Query: 788 NANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVT 847
++ G+ NY + + ++T L KV +S+GIH A A P ++
Sbjct: 744 ------EGRLAGLKNYATA--VKEQGDEVTFLRKVIRDQASKSYGIHCARLAGLPGQIIQ 795
Query: 848 LAREKAAELE 857
A + +LE
Sbjct: 796 RANQLVQQLE 805
>gi|50915171|ref|YP_061143.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS10394]
gi|139474579|ref|YP_001129295.1| DNA mismatch repair protein MutS [Streptococcus pyogenes str.
Manfredo]
gi|68052493|sp|Q5X9F3.1|MUTS_STRP6 RecName: Full=DNA mismatch repair protein MutS
gi|166232146|sp|A2RGX2.1|MUTS_STRPG RecName: Full=DNA mismatch repair protein MutS
gi|50904245|gb|AAT87960.1| MutS [Streptococcus pyogenes MGAS10394]
gi|134272826|emb|CAM31104.1| DNA mismatch repair protein MutS [Streptococcus pyogenes str.
Manfredo]
Length = 851
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 216/721 (29%), Positives = 356/721 (49%), Gaps = 83/721 (11%)
Query: 151 NGCTIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRD 210
+GC GL Y+D++ + + D FT+V S + L KE LL + S E +T+
Sbjct: 134 DGCRYGLAYMDVSTGEFCVTDLAD---FTSVRSEIQNLKAKEVLLGFDL--SEEEQTI-- 186
Query: 211 ALTRCGVMLTERKKTEFKTRDLVQDLDRLVRGSVEPVRDLVSGFEIAPGALGALLSYAEL 270
L + +L ++T ++ + L+ G + V A G LL Y
Sbjct: 187 -LVKQMNLLLSYEETVYEDKSLID-------GQLTTVE---------LTAAGKLLQYVHK 229
Query: 271 LSDESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGK 330
+ Y + Y+++ A +L+++E+ K+ SL+ L++ T TA MG
Sbjct: 230 TQMRELSHLQALVHYEIKDYLQMSYATKSSLDLVENARTNKKHGSLYWLLDETKTA-MGM 288
Query: 331 RLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAG 390
RLL W+ +PL+ I R +I+Q F++ R DL LK + DIERL + +A
Sbjct: 289 RLLRSWIDRPLVSKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKAN 348
Query: 391 LQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV 450
+ +++L + ++PYI++ L+ F S ++ ++ ++SL + ++L + T++
Sbjct: 349 PKDLLQLGHTLAQVPYIKAILES----FDSPCVDKLVNDIDSLPELEYL------IRTAI 398
Query: 451 DLDQ---LENGEYMISSSYDTGLSALKN----------EQESLERQIHSLHKQTASDLDL 497
D D + G +I + +D L + + E+ ERQ ++
Sbjct: 399 DPDAPATISEGS-IIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINN-------- 449
Query: 498 PVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQY 557
LK+D + G+ F +T + + F T K+ ++ +L K+ Q
Sbjct: 450 -----LKIDYNKKDGYYFHVTTSNLSLVPE----HFFRKATLKNSERYGTAELAKIEGQM 500
Query: 558 QKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPD 617
+ EE + + ++ + T+ + LA +L+ +DVL S A +A + Y RP
Sbjct: 501 LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAET--NHYIRPQ 558
Query: 618 INPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQV 676
N V I ++ RH VE V +IPN + S Q+ITGPNM GKST++RQ+
Sbjct: 559 FNDNHV--ITIQEGRHAVVEKVMGVQEYIPNSISFDQQTS-IQLITGPNMSGKSTYMRQL 615
Query: 677 GVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDR 736
+ ++MAQ+GSFV D + + D IF R+GA D + G STFM EM+E +K A+D
Sbjct: 616 ALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADDLISGQSTFMVEMMEANQAIKRASDN 675
Query: 737 SLIIIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQ 796
SLI+ DELGRGT+TYDG LA AI E++ + + A T+FATH+HELT L + +
Sbjct: 676 SLILFDELGRGTATYDGMALAQAIIEYIHDRVGAKTIFATHYHELTDL---------STK 726
Query: 797 MVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAEL 856
+ + N HV+ +T L+K+ G D+S+GIHVA+ A P+S++ A E L
Sbjct: 727 LTSLVNVHVATL--EKDGDVTFLHKIAEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRL 784
Query: 857 E 857
E
Sbjct: 785 E 785
>gi|384260705|ref|YP_005415891.1| DNA mismatch repair protein mutS [Rhodospirillum photometricum DSM
122]
gi|378401805|emb|CCG06921.1| DNA mismatch repair protein mutS [Rhodospirillum photometricum DSM
122]
Length = 969
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 233/723 (32%), Positives = 350/723 (48%), Gaps = 49/723 (6%)
Query: 154 TIGLGYVDLTKRVLGLAEFLDDSHFTNVESALVALGCKECLLPTEAVKSSECKTLRDALT 213
T+GL +VD++ LG A+ LD + AL L E +LP S +AL
Sbjct: 220 TLGLAWVDVSTGALG-AQALD---VATLGPALARLAPGELILPD---TLSADPAFAEALV 272
Query: 214 RCGVMLTERKKTEFKTRDLVQDLDRLVR-GSVEPVRDLVSGFEIAPGALGALLSYAELLS 272
+++ + F + + + L + G+++ D EIA ALGA++ Y L
Sbjct: 273 SVKPVVSPLPASRFDSENARKRLHEVFAVGALDAFGDFGRA-EIA--ALGAVIDYVTLTQ 329
Query: 273 DESNYGNYYIRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRL 332
R+ + M +D A R L + E+ T K SL ++RT T G G RL
Sbjct: 330 AGRLPRLSPPRRLDESAVMAIDPATRRNLELFETLTGGRKG-SLLATLDRTVT-GPGARL 387
Query: 333 LHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQ 392
L L PL D +N RLD V FV T R +LR L DI R + L R G +
Sbjct: 388 LAERLAAPLTDPEVLNQRLDGVALFVGATEARTELRGLLTGCPDIARALSRLSLGRGGPR 447
Query: 393 QIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFI--ALVETSV 450
+ + R+P +R + G +L + L +L D L + AL +
Sbjct: 448 DLAAVRDGLARVPALRLGIGALGGGLHALPSD-VSSALAALGQHDALVDLLGRALAD--- 503
Query: 451 DLDQLENGEYMISSSYDTGLSALKNEQESLERQIHSLHKQTASDLDLPVDKALKLDKGTQ 510
DL L I + GL + ++ R I +L + + + LK+
Sbjct: 504 DLPVLARDGGFIHPGFHAGLDEARALRDESRRLIAALQARYVEETGI---NTLKIKHNNV 560
Query: 511 FGHVFRITKKEEPKI-----RKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQKVLEEYK 565
G+ + ++ + T F+ +T V+FT L L D+ + E
Sbjct: 561 LGYFIEVPAGRADRLMGARGAEGQTNPFMHRQTLASQVRFTTVDLADLEDRIRGAAERAL 620
Query: 566 NCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINPPDVGD 625
+++L + + +E + A L++LDVLL+ A+LA + Y RP ++
Sbjct: 621 ALEQDLFAELRDAVLAEAEGIAAAADGLAQLDVLLALAELAET--ERYCRPVLDRSLAFS 678
Query: 626 IILEGSRHPCVEAQDWVN----FIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVNIL 681
++ +RHP VEA + F+ N C L G+ + ++TGPNM GKSTF+RQ + +L
Sbjct: 679 LV--NARHPVVEAALKASGEGAFVGNACDLGPGQRLW-LLTGPNMAGKSTFLRQNALIVL 735
Query: 682 MAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLIII 741
MAQ+GSFVP D+A + V D +F+RVGA D RG STFM EM+ETA+IL AT+RSL+I+
Sbjct: 736 MAQMGSFVPADQAHLGVVDRLFSRVGAADDLARGRSTFMVEMVETAAILHQATERSLVIL 795
Query: 742 DELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVGVA 801
DE+GRGT+TYDG +AWA E L + R LFATH+HELT LA + ++ + +
Sbjct: 796 DEIGRGTATYDGLSIAWATVESLHDTTRCRALFATHYHELTVLA-KRLDQLSCHTL---- 850
Query: 802 NYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE--DF 859
+ ++ L++V PGA D+S+GIHVA A P++V+ A E A LE D
Sbjct: 851 ------RVREWKGEVVFLHEVGPGAADRSYGIHVARLAGLPDAVLARAEEVLATLERGDT 904
Query: 860 TPS 862
TPS
Sbjct: 905 TPS 907
>gi|154483535|ref|ZP_02025983.1| hypothetical protein EUBVEN_01239 [Eubacterium ventriosum ATCC
27560]
gi|149735445|gb|EDM51331.1| DNA mismatch repair protein MutS [Eubacterium ventriosum ATCC
27560]
Length = 897
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 216/697 (30%), Positives = 349/697 (50%), Gaps = 66/697 (9%)
Query: 251 VSGFEIAPGALGALLSYAELLSDESNYGNYYIR--KYSLDSYMRLDSAAMRALNVLESKT 308
+S + A G+LL Y L + N ++ + YS ++M LD++ R L + E+
Sbjct: 241 ISNMSLGIIASGSLLKY--LYETQKNSLSHMTKLIPYSTSTFMILDTSTRRNLELCETLR 298
Query: 309 DANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINARLDIVQAFVDDTALRQDLR 368
+ K SL ++++T TA MG R L +++QPL+ EI R +++ R +LR
Sbjct: 299 EKQKKGSLLWVLDKTKTA-MGARTLRNYIEQPLISKEEIINRQKVIEELNKSMITRDELR 357
Query: 369 QHLKRISDIERLMHNLEKRRAGLQQIVKLYQSSIRLPYIRSALQQYEGQFSSLIKERY-- 426
++L I D+ERL+ + R A + ++ S LP+I++ + ++ S L K+ Y
Sbjct: 358 EYLAPIYDLERLLSKISYRSANPRDLIAFKTSLSMLPHIKNIIMDFK---SPLFKDIYNR 414
Query: 427 LDPLESLTDDDHLNKFIALVETSV----DLDQLENGEYMISSSYDTGLSALKNEQESLER 482
LD LE +T L+ S+ ++ E G +I + Y+ + L+N + +
Sbjct: 415 LDVLEDIT---------TLISESIMDDPPINIKEGG--IIRTGYNEEIDRLRNAKTEGKT 463
Query: 483 QIHSLHKQTASDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDG 542
+ + AS+ + K LK+ FG+ ++ + ++ ++ +T +
Sbjct: 464 WLAEME---ASEKESTGIKNLKIKYNKVFGYYIEVSNS----FKDQVPDYYVRKQTLTNA 516
Query: 543 VKFTNTKLKKLGDQYQKVLEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSF 602
++T KLK+L D ++ + + + + + A ++++DV S
Sbjct: 517 ERYTTDKLKELEDVIMGAEDKLFSLEYNIFTAIRDEIFNQINRIQQTAKAVAQIDVFASL 576
Query: 603 ADLASSCPTPYTRPDINPPDVGDIILEGSRHPCVEAQDWVN-FIPNDCKLIRGKSWFQII 661
A +A Y +P IN V DI + RHP VE N FI N+ L + II
Sbjct: 577 AFVADR--NHYVKPKINEKGVIDI--KDGRHPVVEKMMPDNTFIANNTFLDMNNNRLAII 632
Query: 662 TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQ 721
TGPNM GKST++RQ + +LMAQ+GSFVP A+IS+ D IF RVGA D G STFM
Sbjct: 633 TGPNMAGKSTYMRQTALIVLMAQIGSFVPAKYANISICDKIFTRVGASDDLASGQSTFMV 692
Query: 722 EMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVEE--IRAPTLFATHFH 779
EM E A+IL+ AT SL+I+DE+GRGTST+DG +AWA+ EH+ ++ + A TLFATH+H
Sbjct: 693 EMTEVANILRNATANSLLILDEIGRGTSTFDGLSIAWAVVEHICDKKLLGAKTLFATHYH 752
Query: 780 ELTALAHENANEFNTKQMVGVANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFA 839
ELT L + GV NY +S + + L K+ G D+S+GI VA+ A
Sbjct: 753 ELTELE---------GTLPGVNNYCIS--VKEQGDDIVFLRKIVAGGADKSYGIQVAKLA 801
Query: 840 NFPESVVTLAREKAAELEDFTPSAVISDDAKIEVGSKRKRISDPNDMSRGAARAHQ---- 895
PESV+ A+E EL + A I+ AK E+ + + ++ AHQ
Sbjct: 802 GVPESVLNRAKELVNELSN----ADITVKAK-EIAANLQPGNNVLPTMNDDLEAHQMTLF 856
Query: 896 -------FLKEFSDMPLETMDLKEALERVKRMKDDLE 925
+KE ++ L TM E L + ++++ L+
Sbjct: 857 DTVREDDIIKELQEIDLGTMTPIEGLNYLYKLQNQLK 893
>gi|379021006|ref|YP_005297668.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M013]
gi|418950189|ref|ZP_13502385.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-160]
gi|359830315|gb|AEV78293.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M013]
gi|375377562|gb|EHS81021.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus IS-160]
Length = 872
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 201/598 (33%), Positives = 310/598 (51%), Gaps = 73/598 (12%)
Query: 282 IRKYSLDSYMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPL 341
+ +Y+ YM++D A R L + ES +K +L LM+ T T MG R L W+ +PL
Sbjct: 239 VVQYAAIDYMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTP-MGARRLKQWIDRPL 297
Query: 342 LDVNEINARLDIVQAFVDDTALRQDLRQHLKRISDIERLMHNLEKRRAGLQQIVKLYQSS 401
+ +I ARLDIV F R LR +L ++ DIERL+ + + +++L S
Sbjct: 298 ISKEQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDLIQLKHSI 357
Query: 402 IRLPYIRSALQQYEGQFSSLIKERYLDPLESLTDDDHLNKFIALVETSV----DLDQLEN 457
+P I++ L +L+ L+PL+ L D ++E S+ + +
Sbjct: 358 SEIPNIKALLNSMNQ--DTLVHVNQLEPLDDLLD---------ILEQSLVEEPPISVKDG 406
Query: 458 GEYMI--SSSYDTGLSALKN------EQESLERQIHSLHKQTASDLDLPVDKALKLDKGT 509
G + + + D L A KN E ++ ERQ + K+LK+
Sbjct: 407 GLFKVGFNMQLDEYLEASKNGKTWLAELQAKERQRTGI-------------KSLKISFNK 453
Query: 510 QFGHVFRITKKE----EPKIRKKLTTQFIVLETRKDGVKFTNTKLKK-----LGDQYQKV 560
FG+ IT+ EP + Q T + +F +LK+ LG + + +
Sbjct: 454 VFGYFIEITRANLQNFEPSEFGYMRKQ-----TLSNAERFITDELKEKEDIILGAEDKAI 508
Query: 561 LEEYKNCQKELVNRVIQTAVTFSEIFKSLATMLSELDVLLSFADLASSCPTPYTRPDINP 620
EY L ++ + ++E + A ++SELD L SFA++A YTRP +
Sbjct: 509 ELEYL-----LFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQKYN--YTRPSFSE 561
Query: 621 PDVGDIILEGSRHPCVE-AQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQVGVN 679
+++ SRHP VE D+ +++PN+C+L +++ +ITGPNM GKST++RQV +
Sbjct: 562 NKTLELV--ESRHPVVERVMDYNDYVPNNCRL-DNETFIYLITGPNMSGKSTYMRQVAII 618
Query: 680 ILMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDRSLI 739
+MAQ+G++VPC A + + D IF R+GA D + G STFM EMLE L AT+ SLI
Sbjct: 619 SIMAQMGAYVPCKEAVLPIFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATEDSLI 678
Query: 740 IIDELGRGTSTYDGFGLAWAICEHLVEEIRAPTLFATHFHELTALAHENANEFNTKQMVG 799
I DE+GRGTSTYDG LA A+ E++ E A TLF+TH+HELT L + +
Sbjct: 679 IFDEIGRGTSTYDGLALAQAMIEYVAETSHAKTLFSTHYHELTTL---------DQALPS 729
Query: 800 VANYHVSAHIDSTSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELE 857
+ N HV+A + +L L+KV+ GA D S+GI VA+ A+ PE V++ A+ +E E
Sbjct: 730 LKNVHVAA--NEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFE 785
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,042,821,397
Number of Sequences: 23463169
Number of extensions: 589219138
Number of successful extensions: 1747624
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8867
Number of HSP's successfully gapped in prelim test: 1603
Number of HSP's that attempted gapping in prelim test: 1709867
Number of HSP's gapped (non-prelim): 15093
length of query: 938
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 786
effective length of database: 8,792,793,679
effective search space: 6911135831694
effective search space used: 6911135831694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)