Query 002310
Match_columns 937
No_of_seqs 542 out of 3637
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 21:12:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002310.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002310hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2217 ZntA Cation transport 100.0 8E-140 2E-144 1237.9 83.3 707 126-906 2-710 (713)
2 KOG0207 Cation transport ATPas 100.0 8E-137 2E-141 1181.5 62.6 776 126-937 146-939 (951)
3 PRK10671 copA copper exporting 100.0 4E-115 9E-120 1079.5 85.4 724 126-905 99-829 (834)
4 PRK11033 zntA zinc/cadmium/mer 100.0 1E-113 3E-118 1045.8 87.7 688 124-906 51-739 (741)
5 TIGR01511 ATPase-IB1_Cu copper 100.0 4E-101 8E-106 913.1 69.2 558 277-885 1-562 (562)
6 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.3E-92 2.8E-97 837.5 66.0 533 296-904 1-535 (536)
7 TIGR01525 ATPase-IB_hvy heavy 100.0 3.2E-92 6.9E-97 839.4 69.2 551 296-903 1-556 (556)
8 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-92 4.4E-97 862.8 66.8 508 327-866 56-612 (755)
9 PRK14010 potassium-transportin 100.0 5.7E-91 1.2E-95 822.9 63.2 492 332-862 72-577 (673)
10 PRK01122 potassium-transportin 100.0 5E-90 1.1E-94 815.5 67.2 513 327-877 67-600 (679)
11 PRK10517 magnesium-transportin 100.0 9E-90 2E-94 848.7 66.1 559 327-920 123-763 (902)
12 TIGR01524 ATPase-IIIB_Mg magne 100.0 1.3E-89 2.8E-94 848.2 66.8 558 326-920 88-728 (867)
13 PRK15122 magnesium-transportin 100.0 1.2E-89 2.5E-94 849.2 65.8 568 326-931 111-773 (903)
14 TIGR01517 ATPase-IIB_Ca plasma 100.0 5.1E-88 1.1E-92 843.8 64.4 586 329-930 131-806 (941)
15 TIGR01497 kdpB K+-transporting 100.0 2.3E-86 4.9E-91 782.5 64.1 516 325-876 64-600 (675)
16 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2.5E-86 5.4E-91 823.9 65.8 577 330-931 84-756 (884)
17 KOG0202 Ca2+ transporting ATPa 100.0 2.4E-87 5.1E-92 761.6 44.1 588 326-932 78-817 (972)
18 KOG0204 Calcium transporting A 100.0 7.1E-86 1.5E-90 748.0 39.8 555 362-932 219-878 (1034)
19 COG0474 MgtA Cation transport 100.0 7.9E-85 1.7E-89 807.3 52.8 573 333-931 110-778 (917)
20 TIGR01106 ATPase-IIC_X-K sodiu 100.0 8.3E-83 1.8E-87 798.8 68.2 580 325-929 103-821 (997)
21 TIGR01523 ATPase-IID_K-Na pota 100.0 1.3E-82 2.8E-87 794.5 66.2 583 326-932 81-890 (1053)
22 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.2E-80 4.7E-85 772.3 66.0 589 327-931 37-768 (917)
23 TIGR01494 ATPase_P-type ATPase 100.0 3.5E-80 7.6E-85 729.3 53.9 477 333-871 3-484 (499)
24 TIGR01657 P-ATPase-V P-type AT 100.0 8E-78 1.7E-82 758.6 59.0 565 325-919 192-923 (1054)
25 TIGR01652 ATPase-Plipid phosph 100.0 1E-69 2.3E-74 687.0 50.6 619 276-922 11-902 (1057)
26 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.6E-72 3.5E-77 638.6 20.3 610 296-932 96-846 (1019)
27 COG2216 KdpB High-affinity K+ 100.0 5.1E-65 1.1E-69 550.5 38.6 530 280-847 15-568 (681)
28 KOG0208 Cation transport ATPas 100.0 3.6E-64 7.7E-69 578.9 44.4 570 323-923 211-979 (1140)
29 PLN03190 aminophospholipid tra 100.0 3.4E-63 7.3E-68 621.2 57.0 626 276-927 97-1010(1178)
30 KOG0205 Plasma membrane H+-tra 100.0 2.7E-64 5.9E-69 555.3 31.1 500 330-863 101-659 (942)
31 KOG0210 P-type ATPase [Inorgan 100.0 1.7E-54 3.6E-59 479.9 27.2 497 323-852 129-845 (1051)
32 KOG0209 P-type ATPase [Inorgan 100.0 3.5E-51 7.6E-56 461.4 36.1 462 329-814 220-832 (1160)
33 KOG0206 P-type ATPase [General 100.0 2.7E-50 5.8E-55 487.9 29.1 566 276-866 42-872 (1151)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.5E-33 3.2E-38 299.9 23.3 223 331-571 1-230 (230)
35 PF00702 Hydrolase: haloacid d 100.0 1.3E-30 2.9E-35 273.5 12.2 210 575-808 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.7 1.1E-16 2.5E-21 145.6 13.5 125 712-839 18-145 (152)
37 PF00403 HMA: Heavy-metal-asso 99.3 1.5E-11 3.3E-16 102.3 8.2 62 129-198 1-62 (62)
38 COG2608 CopZ Copper chaperone 99.2 3.4E-11 7.3E-16 102.6 8.3 68 126-201 2-69 (71)
39 TIGR02137 HSK-PSP phosphoserin 99.0 1.2E-09 2.6E-14 113.5 11.4 116 724-843 68-198 (203)
40 PRK11133 serB phosphoserine ph 98.9 5.1E-09 1.1E-13 116.1 12.5 115 724-841 181-316 (322)
41 TIGR01670 YrbI-phosphatas 3-de 98.9 1.2E-08 2.7E-13 101.3 12.0 105 732-840 36-148 (154)
42 TIGR00338 serB phosphoserine p 98.9 9.7E-09 2.1E-13 108.3 11.0 113 724-839 85-218 (219)
43 TIGR02726 phenyl_P_delta pheny 98.8 3.9E-08 8.4E-13 98.8 10.8 100 731-832 41-142 (169)
44 PRK09484 3-deoxy-D-manno-octul 98.7 9.3E-08 2E-12 97.9 13.1 139 702-844 19-172 (183)
45 TIGR01487 SPP-like sucrose-pho 98.7 7.2E-08 1.6E-12 101.5 11.2 131 706-839 3-214 (215)
46 PRK01158 phosphoglycolate phos 98.6 2E-07 4.2E-12 99.1 12.5 133 705-841 4-226 (230)
47 COG0560 SerB Phosphoserine pho 98.6 1.4E-07 3E-12 98.6 10.9 96 723-818 76-190 (212)
48 PRK13582 thrH phosphoserine ph 98.6 2.1E-07 4.5E-12 97.1 11.7 116 724-841 68-196 (205)
49 PRK10513 sugar phosphate phosp 98.6 3.9E-07 8.4E-12 99.4 13.8 134 705-841 4-265 (270)
50 KOG1615 Phosphoserine phosphat 98.6 5.3E-08 1.2E-12 95.7 5.9 91 724-814 88-199 (227)
51 COG0561 Cof Predicted hydrolas 98.5 5.8E-07 1.3E-11 97.7 12.7 135 705-842 4-259 (264)
52 PRK15126 thiamin pyrimidine py 98.5 4.2E-07 9E-12 99.3 11.6 133 706-841 4-259 (272)
53 PRK10976 putative hydrolase; P 98.5 7.3E-07 1.6E-11 97.1 12.3 133 706-841 4-261 (266)
54 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 4.2E-07 9E-12 94.3 10.0 100 724-825 80-200 (201)
55 TIGR01482 SPP-subfamily Sucros 98.5 6.6E-07 1.4E-11 94.7 11.0 124 709-835 3-212 (225)
56 COG1778 Low specificity phosph 98.5 3.5E-07 7.7E-12 87.3 7.3 116 732-851 43-166 (170)
57 PLN02954 phosphoserine phospha 98.4 1.6E-06 3.4E-11 91.8 12.5 114 724-839 84-222 (224)
58 PRK10530 pyridoxal phosphate ( 98.4 2.9E-06 6.2E-11 92.6 13.8 52 790-841 217-268 (272)
59 TIGR03333 salvage_mtnX 2-hydro 98.4 2E-06 4.4E-11 90.4 11.5 118 723-841 69-209 (214)
60 PF12710 HAD: haloacid dehalog 98.4 8.3E-07 1.8E-11 91.3 7.6 79 727-805 92-192 (192)
61 PF08282 Hydrolase_3: haloacid 98.3 3E-06 6.5E-11 90.6 12.0 119 722-840 13-254 (254)
62 TIGR00099 Cof-subfamily Cof su 98.3 2.6E-06 5.6E-11 92.2 10.3 50 790-839 206-255 (256)
63 PRK09552 mtnX 2-hydroxy-3-keto 98.3 3.1E-06 6.8E-11 89.3 10.2 114 724-840 74-212 (219)
64 PLN02887 hydrolase family prot 98.3 6.8E-06 1.5E-10 97.7 13.7 52 790-841 525-576 (580)
65 TIGR01489 DKMTPPase-SF 2,3-dik 98.2 5.1E-06 1.1E-10 85.1 8.7 90 723-812 71-186 (188)
66 TIGR01488 HAD-SF-IB Haloacid D 98.2 3.5E-06 7.6E-11 85.5 7.4 82 724-807 73-177 (177)
67 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 8.2E-06 1.8E-10 84.8 9.3 92 721-814 84-197 (202)
68 PRK13222 phosphoglycolate phos 98.1 2.3E-05 5.1E-10 82.8 11.3 119 723-843 92-224 (226)
69 PRK08238 hypothetical protein; 98.0 0.00023 5E-09 83.3 18.4 96 724-821 72-172 (479)
70 PRK00192 mannosyl-3-phosphogly 98.0 5.5E-05 1.2E-09 82.7 12.6 57 705-764 5-61 (273)
71 COG0546 Gph Predicted phosphat 98.0 5.7E-05 1.2E-09 79.8 12.2 118 722-841 87-218 (220)
72 PRK03669 mannosyl-3-phosphogly 98.0 7.5E-05 1.6E-09 81.6 12.9 60 702-764 5-64 (271)
73 cd01427 HAD_like Haloacid deha 97.9 4.5E-05 9.7E-10 72.9 9.1 92 721-812 21-138 (139)
74 TIGR01454 AHBA_synth_RP 3-amin 97.9 0.0001 2.2E-09 76.9 11.5 115 724-840 75-203 (205)
75 KOG0207 Cation transport ATPas 97.8 3.7E-05 8.1E-10 92.0 7.3 71 127-205 70-140 (951)
76 PRK13223 phosphoglycolate phos 97.7 0.00029 6.3E-09 77.0 12.3 117 723-841 100-230 (272)
77 TIGR01486 HAD-SF-IIB-MPGP mann 97.7 0.00032 7E-09 75.9 12.4 52 790-841 196-253 (256)
78 TIGR02471 sucr_syn_bact_C sucr 97.7 0.0002 4.4E-09 76.5 10.2 52 790-841 177-232 (236)
79 PRK13288 pyrophosphatase PpaX; 97.7 0.00027 5.9E-09 74.2 11.1 115 724-840 82-210 (214)
80 PRK10671 copA copper exporting 97.5 0.00014 3E-09 91.9 7.5 64 126-202 3-66 (834)
81 TIGR00003 copper ion binding p 97.5 0.00041 8.9E-09 56.0 7.9 65 127-199 3-67 (68)
82 TIGR01449 PGP_bact 2-phosphogl 97.5 0.0006 1.3E-08 71.3 10.5 113 724-838 85-211 (213)
83 TIGR01544 HAD-SF-IE haloacid d 97.4 0.0013 2.8E-08 71.0 12.3 118 723-840 120-273 (277)
84 PLN02957 copper, zinc superoxi 97.4 0.0004 8.6E-09 74.0 8.4 68 125-204 5-72 (238)
85 TIGR01485 SPP_plant-cyano sucr 97.4 0.00099 2.1E-08 71.8 11.3 57 707-763 4-60 (249)
86 PRK10187 trehalose-6-phosphate 97.3 0.0012 2.5E-08 71.9 11.0 61 703-763 13-76 (266)
87 PRK13225 phosphoglycolate phos 97.3 0.0021 4.7E-08 70.1 12.3 114 724-840 142-267 (273)
88 KOG4656 Copper chaperone for s 97.3 0.00063 1.4E-08 67.6 7.2 69 125-205 6-74 (247)
89 PRK10826 2-deoxyglucose-6-phos 97.3 0.0012 2.5E-08 69.9 9.6 112 723-837 91-216 (222)
90 TIGR02461 osmo_MPG_phos mannos 97.1 0.0037 8.1E-08 66.2 11.4 53 707-763 2-54 (225)
91 PRK13226 phosphoglycolate phos 97.1 0.0032 6.9E-08 67.0 10.6 115 724-840 95-224 (229)
92 TIGR03351 PhnX-like phosphonat 97.1 0.004 8.6E-08 65.6 11.1 115 723-839 86-218 (220)
93 TIGR01548 HAD-SF-IA-hyp1 haloa 97.0 0.0019 4.2E-08 66.8 8.4 86 722-807 104-197 (197)
94 PRK13478 phosphonoacetaldehyde 97.0 0.0049 1.1E-07 67.1 11.9 85 724-809 101-197 (267)
95 PRK11009 aphA acid phosphatase 97.0 0.0023 4.9E-08 68.0 8.7 83 724-810 114-206 (237)
96 TIGR01662 HAD-SF-IIIA HAD-supe 97.0 0.0042 9.2E-08 59.7 10.0 104 706-809 2-125 (132)
97 PRK06769 hypothetical protein; 97.0 0.0026 5.6E-08 64.5 8.5 109 703-813 3-135 (173)
98 PLN02382 probable sucrose-phos 97.0 0.0058 1.3E-07 70.6 12.1 133 706-841 11-257 (413)
99 TIGR01422 phosphonatase phosph 96.9 0.0073 1.6E-07 65.2 11.9 86 724-810 99-196 (253)
100 PRK11590 hypothetical protein; 96.9 0.0062 1.3E-07 63.9 11.0 92 724-816 95-204 (211)
101 PRK12702 mannosyl-3-phosphogly 96.9 0.0078 1.7E-07 65.1 11.5 55 706-763 3-57 (302)
102 PLN03243 haloacid dehalogenase 96.9 0.0079 1.7E-07 65.2 11.7 111 724-836 109-230 (260)
103 TIGR01672 AphA HAD superfamily 96.9 0.0027 5.9E-08 67.4 7.8 82 724-810 114-206 (237)
104 KOG4383 Uncharacterized conser 96.8 0.011 2.4E-07 68.3 12.7 149 714-862 816-1098(1354)
105 TIGR01545 YfhB_g-proteo haloac 96.8 0.0074 1.6E-07 63.2 10.3 91 724-815 94-202 (210)
106 PRK08942 D,D-heptose 1,7-bisph 96.8 0.013 2.9E-07 59.7 11.7 115 724-840 29-176 (181)
107 PRK06698 bifunctional 5'-methy 96.6 0.011 2.4E-07 69.6 11.7 116 724-843 330-456 (459)
108 COG4359 Uncharacterized conser 96.6 0.0058 1.3E-07 60.4 7.2 89 724-812 73-183 (220)
109 PRK14502 bifunctional mannosyl 96.6 0.017 3.6E-07 69.4 12.4 56 705-763 417-472 (694)
110 PRK11587 putative phosphatase; 96.6 0.014 3E-07 61.5 10.6 105 724-828 83-197 (218)
111 KOG1603 Copper chaperone [Inor 96.6 0.008 1.7E-07 51.6 7.0 56 130-196 8-63 (73)
112 TIGR01668 YqeG_hyp_ppase HAD s 96.5 0.014 3E-07 59.0 9.6 105 701-810 22-131 (170)
113 PHA02530 pseT polynucleotide k 96.5 0.008 1.7E-07 66.6 8.6 91 721-811 184-292 (300)
114 TIGR01428 HAD_type_II 2-haloal 96.5 0.0082 1.8E-07 62.1 8.0 87 724-810 92-187 (198)
115 PLN02770 haloacid dehalogenase 96.5 0.022 4.8E-07 61.3 11.5 110 724-835 108-230 (248)
116 TIGR01685 MDP-1 magnesium-depe 96.4 0.011 2.4E-07 59.7 8.4 94 720-813 41-155 (174)
117 TIGR01484 HAD-SF-IIB HAD-super 96.4 0.013 2.8E-07 61.0 9.2 52 707-762 2-55 (204)
118 COG4030 Uncharacterized protei 96.4 0.024 5.3E-07 57.7 10.4 118 724-842 83-263 (315)
119 TIGR02253 CTE7 HAD superfamily 96.3 0.018 4E-07 60.5 9.8 91 724-814 94-195 (221)
120 PRK14988 GMP/IMP nucleotidase; 96.3 0.013 2.8E-07 62.1 8.5 92 724-815 93-195 (224)
121 TIGR00213 GmhB_yaeD D,D-heptos 96.3 0.024 5.2E-07 57.6 10.0 129 706-836 3-174 (176)
122 PLN02575 haloacid dehalogenase 96.2 0.043 9.3E-07 62.2 12.0 111 724-836 216-337 (381)
123 PF13419 HAD_2: Haloacid dehal 96.1 0.015 3.2E-07 58.0 7.4 89 722-810 75-172 (176)
124 COG2179 Predicted hydrolase of 96.1 0.047 1E-06 53.6 10.1 104 699-807 23-130 (175)
125 PLN02779 haloacid dehalogenase 96.0 0.026 5.7E-07 62.1 9.3 111 724-836 144-268 (286)
126 PRK14501 putative bifunctional 96.0 0.053 1.1E-06 67.7 13.0 65 699-763 487-554 (726)
127 TIGR02254 YjjG/YfnB HAD superf 96.0 0.03 6.5E-07 58.9 9.4 113 724-839 97-223 (224)
128 TIGR01990 bPGM beta-phosphoglu 96.0 0.014 3E-07 59.5 6.4 85 724-810 87-180 (185)
129 TIGR01509 HAD-SF-IA-v3 haloaci 96.0 0.026 5.7E-07 57.1 8.5 85 724-809 85-178 (183)
130 smart00775 LNS2 LNS2 domain. T 96.0 0.073 1.6E-06 53.0 11.3 88 722-809 25-140 (157)
131 TIGR01656 Histidinol-ppas hist 95.8 0.027 5.8E-07 55.4 7.4 87 724-810 27-140 (147)
132 TIGR01664 DNA-3'-Pase DNA 3'-p 95.7 0.053 1.1E-06 54.6 9.2 106 704-809 13-156 (166)
133 PLN02580 trehalose-phosphatase 95.7 0.1 2.2E-06 59.2 12.4 76 681-757 96-173 (384)
134 TIGR02009 PGMB-YQAB-SF beta-ph 95.7 0.024 5.1E-07 57.7 6.8 86 723-810 87-181 (185)
135 PRK09449 dUMP phosphatase; Pro 95.7 0.062 1.3E-06 56.7 10.1 114 724-840 95-222 (224)
136 TIGR01533 lipo_e_P4 5'-nucleot 95.6 0.048 1E-06 58.9 8.9 83 722-804 116-204 (266)
137 PLN02940 riboflavin kinase 95.6 0.047 1E-06 62.6 9.4 110 724-835 93-215 (382)
138 PRK05446 imidazole glycerol-ph 95.2 0.049 1.1E-06 61.3 7.7 88 723-812 29-145 (354)
139 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.2 0.12 2.7E-06 55.3 10.5 98 704-808 8-115 (242)
140 TIGR01686 FkbH FkbH-like domai 95.1 0.062 1.3E-06 60.2 8.3 109 706-814 5-129 (320)
141 TIGR01549 HAD-SF-IA-v1 haloaci 95.1 0.069 1.5E-06 52.6 7.6 83 724-808 64-154 (154)
142 PF06888 Put_Phosphatase: Puta 94.9 0.077 1.7E-06 56.2 7.6 81 724-804 71-186 (234)
143 TIGR01675 plant-AP plant acid 94.8 0.15 3.2E-06 53.8 9.4 79 723-801 119-209 (229)
144 PLN02811 hydrolase 94.8 0.086 1.9E-06 55.6 7.8 90 723-812 77-181 (220)
145 TIGR00685 T6PP trehalose-phosp 94.8 0.13 2.7E-06 55.3 9.2 61 776-840 167-239 (244)
146 TIGR02252 DREG-2 REG-2-like, H 94.7 0.089 1.9E-06 54.5 7.8 85 724-809 105-199 (203)
147 TIGR01261 hisB_Nterm histidino 94.7 0.087 1.9E-06 52.7 7.2 88 724-813 29-145 (161)
148 PF09419 PGP_phosphatase: Mito 94.7 0.14 3E-06 51.3 8.5 98 701-802 38-151 (168)
149 TIGR01681 HAD-SF-IIIC HAD-supe 94.6 0.12 2.6E-06 49.6 7.7 83 724-806 29-126 (128)
150 TIGR02463 MPGP_rel mannosyl-3- 94.5 0.13 2.7E-06 54.2 8.3 38 776-813 179-220 (221)
151 TIGR01691 enolase-ppase 2,3-di 94.2 0.13 2.9E-06 54.1 7.7 93 721-813 92-194 (220)
152 smart00577 CPDc catalytic doma 94.1 0.079 1.7E-06 52.2 5.3 90 722-812 43-139 (148)
153 PTZ00174 phosphomannomutase; P 93.0 0.083 1.8E-06 56.8 3.6 54 775-828 187-245 (247)
154 PLN03017 trehalose-phosphatase 92.9 1.5 3.2E-05 49.5 13.3 63 695-758 102-166 (366)
155 COG3769 Predicted hydrolase (H 92.8 0.71 1.5E-05 47.4 9.6 57 704-764 7-63 (274)
156 TIGR02247 HAD-1A3-hyp Epoxide 92.5 0.18 4E-06 52.5 5.4 88 723-810 93-191 (211)
157 PLN02919 haloacid dehalogenase 92.5 0.59 1.3E-05 60.6 10.9 111 724-836 161-285 (1057)
158 COG4907 Predicted membrane pro 92.5 0.089 1.9E-06 58.8 2.9 28 71-98 564-591 (595)
159 PF13344 Hydrolase_6: Haloacid 92.3 0.25 5.4E-06 45.3 5.3 85 718-808 8-99 (101)
160 TIGR02052 MerP mercuric transp 92.0 0.76 1.7E-05 40.1 8.0 65 127-199 24-88 (92)
161 PLN02645 phosphoglycolate phos 91.5 0.48 1.1E-05 52.8 7.5 102 703-811 27-134 (311)
162 PHA02597 30.2 hypothetical pro 91.2 0.6 1.3E-05 48.1 7.5 86 724-811 74-170 (197)
163 TIGR01993 Pyr-5-nucltdase pyri 90.6 0.61 1.3E-05 47.4 6.7 84 724-810 84-180 (184)
164 KOG3120 Predicted haloacid deh 90.6 0.93 2E-05 46.6 7.6 91 724-814 84-209 (256)
165 PLN02205 alpha,alpha-trehalose 90.3 1.3 2.9E-05 55.9 10.5 62 699-760 591-653 (854)
166 PRK09456 ?-D-glucose-1-phospha 90.2 0.74 1.6E-05 47.6 7.0 88 724-811 84-181 (199)
167 PF05116 S6PP: Sucrose-6F-phos 90.2 1.2 2.7E-05 47.8 9.0 75 729-819 133-212 (247)
168 PRK10563 6-phosphogluconate ph 90.1 0.55 1.2E-05 49.3 6.1 88 723-813 87-184 (221)
169 PRK10725 fructose-1-P/6-phosph 89.0 1.1 2.3E-05 45.7 7.0 84 725-810 89-181 (188)
170 PF03767 Acid_phosphat_B: HAD 87.8 0.53 1.2E-05 49.9 4.0 80 724-803 115-207 (229)
171 PRK10444 UMP phosphatase; Prov 85.9 2.1 4.5E-05 46.1 7.2 102 717-832 10-117 (248)
172 COG2177 FtsX Cell division pro 85.0 67 0.0015 35.5 20.6 23 137-159 70-92 (297)
173 PLN02151 trehalose-phosphatase 84.6 8.7 0.00019 43.3 11.5 77 681-758 75-153 (354)
174 TIGR01457 HAD-SF-IIA-hyp2 HAD- 84.2 5.3 0.00011 43.0 9.5 54 706-763 3-59 (249)
175 TIGR01680 Veg_Stor_Prot vegeta 83.6 6.3 0.00014 42.6 9.5 79 722-801 143-235 (275)
176 TIGR01684 viral_ppase viral ph 83.0 2.6 5.7E-05 45.9 6.4 60 703-765 125-187 (301)
177 PRK13748 putative mercuric red 82.1 3.5 7.7E-05 49.9 7.9 67 129-204 3-69 (561)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 81.5 4.4 9.4E-05 43.8 7.6 81 707-796 4-93 (257)
179 PLN03138 Protein TOC75; Provis 81.4 1.6 3.4E-05 53.8 4.5 15 146-160 137-151 (796)
180 PRK10748 flavin mononucleotide 80.6 2.9 6.3E-05 44.5 5.8 84 724-813 113-206 (238)
181 TIGR01452 PGP_euk phosphoglyco 80.5 4.8 0.0001 44.1 7.6 97 706-812 4-108 (279)
182 cd00371 HMA Heavy-metal-associ 80.5 7.9 0.00017 27.9 6.9 42 131-172 3-44 (63)
183 TIGR02251 HIF-SF_euk Dullard-l 80.0 1.1 2.3E-05 44.9 2.0 89 722-813 40-135 (162)
184 TIGR01663 PNK-3'Pase polynucle 79.5 6.1 0.00013 47.1 8.4 103 704-807 168-303 (526)
185 TIGR02463 MPGP_rel mannosyl-3- 78.7 5 0.00011 42.0 6.8 53 708-764 3-56 (221)
186 KOG1456 Heterogeneous nuclear 78.0 6.6 0.00014 43.3 7.2 44 128-171 32-75 (494)
187 PF12689 Acid_PPase: Acid Phos 77.8 8.2 0.00018 38.9 7.6 81 724-804 45-140 (169)
188 PLN02177 glycerol-3-phosphate 77.8 13 0.00028 44.2 10.3 88 724-815 110-215 (497)
189 PRK14054 methionine sulfoxide 76.6 3.5 7.5E-05 41.5 4.5 40 138-177 10-68 (172)
190 TIGR01458 HAD-SF-IIA-hyp3 HAD- 75.1 8.1 0.00018 41.7 7.3 111 726-839 122-253 (257)
191 PF08235 LNS2: LNS2 (Lipin/Ned 72.9 22 0.00048 35.3 8.9 88 722-809 25-140 (157)
192 COG0637 Predicted phosphatase/ 72.7 12 0.00026 39.4 7.7 91 723-813 85-184 (221)
193 COG1011 Predicted hydrolase (H 72.3 14 0.0003 38.6 8.1 112 724-840 99-226 (229)
194 TIGR01493 HAD-SF-IA-v2 Haloaci 71.2 3.7 8.1E-05 41.1 3.3 77 724-807 90-175 (175)
195 COG0241 HisB Histidinol phosph 70.5 12 0.00026 38.1 6.6 88 725-813 32-146 (181)
196 COG0647 NagD Predicted sugar p 70.5 36 0.00077 37.0 10.7 105 717-831 17-129 (269)
197 PLN03138 Protein TOC75; Provis 70.1 6.9 0.00015 48.4 5.7 13 187-199 189-201 (796)
198 PHA03398 viral phosphatase sup 69.5 11 0.00023 41.3 6.4 58 704-764 128-188 (303)
199 COG3700 AphA Acid phosphatase 68.7 11 0.00024 37.6 5.7 88 725-813 115-210 (237)
200 PRK05528 methionine sulfoxide 68.5 7.6 0.00017 38.5 4.7 40 138-177 8-61 (156)
201 TIGR01456 CECR5 HAD-superfamil 66.7 22 0.00049 39.7 8.6 86 717-808 9-104 (321)
202 PRK00058 methionine sulfoxide 65.1 7.5 0.00016 40.4 4.0 40 138-177 52-110 (213)
203 PRK13014 methionine sulfoxide 64.9 7.2 0.00016 39.8 3.8 40 138-177 15-73 (186)
204 PF01206 TusA: Sulfurtransfera 64.4 15 0.00033 30.8 5.2 55 128-200 1-55 (70)
205 TIGR00739 yajC preprotein tran 62.6 37 0.00081 29.9 7.4 31 351-381 28-58 (84)
206 PTZ00174 phosphomannomutase; P 61.7 19 0.00041 38.6 6.6 53 704-759 5-57 (247)
207 TIGR01460 HAD-SF-IIA Haloacid 61.7 56 0.0012 34.7 10.2 85 719-809 9-101 (236)
208 PRK05550 bifunctional methioni 61.3 39 0.00084 36.9 8.7 40 138-177 134-192 (283)
209 KOG0208 Cation transport ATPas 60.3 4.7E+02 0.01 33.6 18.3 82 715-798 638-732 (1140)
210 PRK13111 trpA tryptophan synth 59.5 2.3E+02 0.0051 30.6 14.4 76 723-801 125-212 (258)
211 COG0078 ArgF Ornithine carbamo 58.9 95 0.0021 34.2 11.0 99 702-811 69-178 (310)
212 PLN02591 tryptophan synthase 58.1 91 0.002 33.6 10.9 81 723-806 114-209 (250)
213 PRK14194 bifunctional 5,10-met 57.7 77 0.0017 35.0 10.4 61 770-830 139-209 (301)
214 PF02358 Trehalose_PPase: Treh 57.5 30 0.00065 36.7 7.2 54 709-762 2-58 (235)
215 TIGR00262 trpA tryptophan synt 56.4 85 0.0018 33.9 10.5 79 721-801 121-210 (256)
216 PF01625 PMSR: Peptide methion 55.9 18 0.00039 35.9 4.8 40 138-177 7-65 (155)
217 TIGR02244 HAD-IG-Ncltidse HAD 54.9 48 0.001 37.4 8.5 37 726-762 186-223 (343)
218 KOG3973 Uncharacterized conser 53.4 14 0.0003 40.5 3.6 8 69-76 411-418 (465)
219 KOG3040 Predicted sugar phosph 52.7 25 0.00055 36.2 5.2 58 715-772 14-76 (262)
220 COG4278 Uncharacterized conser 52.3 16 0.00035 37.9 3.8 10 70-79 217-226 (269)
221 COG0225 MsrA Peptide methionin 52.2 20 0.00044 35.9 4.3 47 138-192 13-78 (174)
222 COG1862 YajC Preprotein transl 51.2 45 0.00098 30.2 6.0 51 331-381 14-64 (97)
223 TIGR01689 EcbF-BcbF capsule bi 50.0 49 0.0011 31.6 6.5 50 706-755 3-55 (126)
224 TIGR00401 msrA methionine-S-su 49.7 24 0.00052 34.7 4.5 40 138-177 7-65 (149)
225 PRK03692 putative UDP-N-acetyl 49.3 89 0.0019 33.5 9.1 123 730-856 95-234 (243)
226 PF13380 CoA_binding_2: CoA bi 49.1 23 0.0005 33.2 4.2 40 724-763 63-103 (116)
227 PLN02423 phosphomannomutase 49.0 26 0.00057 37.5 5.1 41 775-816 188-233 (245)
228 PF13246 Hydrolase_like2: Puta 48.9 33 0.00072 30.6 5.0 60 630-689 19-90 (91)
229 PF06506 PrpR_N: Propionate ca 48.7 65 0.0014 32.5 7.7 106 728-852 65-172 (176)
230 cd04724 Tryptophan_synthase_al 48.6 90 0.0019 33.4 9.1 79 723-801 112-199 (242)
231 PRK15424 propionate catabolism 48.4 1.9E+02 0.0041 34.9 12.6 70 728-799 95-165 (538)
232 PF05822 UMPH-1: Pyrimidine 5' 47.7 68 0.0015 34.3 7.8 115 724-839 90-240 (246)
233 TIGR02250 FCP1_euk FCP1-like p 46.9 37 0.0008 33.7 5.4 41 723-764 57-97 (156)
234 PF00763 THF_DHG_CYH: Tetrahyd 46.8 38 0.00082 31.9 5.2 68 721-788 8-86 (117)
235 TIGR01501 MthylAspMutase methy 45.9 1.3E+02 0.0029 29.0 8.8 69 714-786 54-130 (134)
236 CHL00200 trpA tryptophan synth 45.6 4.3E+02 0.0093 28.7 14.3 80 720-802 124-215 (263)
237 PF11491 DUF3213: Protein of u 45.4 26 0.00057 30.4 3.4 54 139-200 11-64 (88)
238 cd02071 MM_CoA_mut_B12_BD meth 44.3 96 0.0021 29.2 7.6 66 714-780 52-119 (122)
239 PRK05585 yajC preprotein trans 43.7 1.3E+02 0.0029 27.8 8.0 36 345-380 37-72 (106)
240 PRK14179 bifunctional 5,10-met 43.2 1.8E+02 0.004 31.9 10.4 62 769-830 137-208 (284)
241 PF00389 2-Hacid_dh: D-isomer 42.9 3E+02 0.0064 26.0 13.0 86 720-814 2-89 (133)
242 PF03808 Glyco_tran_WecB: Glyc 42.9 1E+02 0.0022 31.0 8.0 118 729-847 37-170 (172)
243 TIGR01459 HAD-SF-IIA-hyp4 HAD- 42.2 29 0.00063 37.0 4.1 83 726-810 140-236 (242)
244 COG1512 Beta-propeller domains 41.9 25 0.00053 38.2 3.5 14 10-23 137-150 (271)
245 KOG1250 Threonine/serine dehyd 39.8 83 0.0018 35.8 7.1 91 707-805 83-177 (457)
246 KOG4383 Uncharacterized conser 38.4 61 0.0013 38.9 6.0 35 374-408 163-197 (1354)
247 TIGR01659 sex-lethal sex-letha 38.0 2.8E+02 0.0061 31.4 11.3 47 126-172 106-158 (346)
248 PF00875 DNA_photolyase: DNA p 37.7 1E+02 0.0022 30.6 7.0 73 729-803 55-133 (165)
249 PRK13125 trpA tryptophan synth 37.6 1.5E+02 0.0032 31.7 8.7 98 719-816 105-216 (244)
250 PRK14192 bifunctional 5,10-met 37.4 73 0.0016 35.0 6.3 67 721-787 11-89 (283)
251 cd01994 Alpha_ANH_like_IV This 36.7 1.5E+02 0.0033 30.5 8.3 37 728-764 11-60 (194)
252 PF04312 DUF460: Protein of un 36.6 2.9E+02 0.0062 26.8 9.2 77 706-785 45-123 (138)
253 PRK05886 yajC preprotein trans 36.6 2.1E+02 0.0045 26.7 8.1 46 351-402 29-76 (109)
254 TIGR00640 acid_CoA_mut_C methy 35.7 4.1E+02 0.0088 25.5 10.7 102 715-818 6-115 (132)
255 PRK02261 methylaspartate mutas 35.5 2.9E+02 0.0063 26.7 9.5 61 714-776 56-124 (137)
256 PTZ00445 p36-lilke protein; Pr 35.4 48 0.001 34.6 4.2 52 699-750 38-101 (219)
257 cd04726 KGPDC_HPS 3-Keto-L-gul 35.2 2.6E+02 0.0056 28.5 9.9 37 727-764 90-128 (202)
258 KOG3915 Transcription regulato 35.1 36 0.00078 38.7 3.5 6 48-53 37-42 (641)
259 COG2503 Predicted secreted aci 34.9 1.5E+02 0.0032 31.6 7.6 79 725-804 123-209 (274)
260 TIGR01517 ATPase-IIB_Ca plasma 34.1 4.2E+02 0.0092 34.4 13.5 35 375-410 187-221 (941)
261 PRK14182 bifunctional 5,10-met 33.5 1E+02 0.0023 33.7 6.7 67 721-787 9-86 (282)
262 PF13242 Hydrolase_like: HAD-h 33.4 1E+02 0.0022 26.1 5.4 51 778-828 11-69 (75)
263 PRK04302 triosephosphate isome 32.9 3.3E+02 0.0071 28.6 10.3 86 725-814 99-202 (223)
264 TIGR00696 wecB_tagA_cpsF bacte 32.6 1.9E+02 0.0041 29.4 8.0 119 730-849 38-171 (177)
265 cd04728 ThiG Thiazole synthase 32.3 1.7E+02 0.0036 31.4 7.6 79 722-802 102-188 (248)
266 cd00532 MGS-like MGS-like doma 32.3 2E+02 0.0043 26.6 7.6 66 718-790 3-69 (112)
267 KOG0105 Alternative splicing f 32.2 2.7E+02 0.006 28.2 8.6 44 128-172 116-159 (241)
268 PF02680 DUF211: Uncharacteriz 32.1 75 0.0016 28.6 4.3 69 126-203 5-78 (95)
269 PF14336 DUF4392: Domain of un 32.0 1E+02 0.0022 34.0 6.4 36 727-762 63-99 (291)
270 COG1171 IlvA Threonine dehydra 31.8 86 0.0019 35.3 5.8 57 747-806 82-138 (347)
271 PF12710 HAD: haloacid dehalog 31.6 26 0.00056 35.4 1.6 13 578-590 1-13 (192)
272 TIGR03679 arCOG00187 arCOG0018 30.8 1.8E+02 0.0039 30.6 7.8 62 728-793 74-140 (218)
273 PF06506 PrpR_N: Propionate ca 30.8 75 0.0016 32.1 4.8 71 722-797 15-86 (176)
274 COG1888 Uncharacterized protei 30.6 2.1E+02 0.0045 25.5 6.6 71 125-203 5-80 (97)
275 PRK14166 bifunctional 5,10-met 30.3 1.1E+02 0.0025 33.4 6.3 67 721-787 9-86 (282)
276 cd00860 ThrRS_anticodon ThrRS 30.2 1.4E+02 0.003 25.9 5.9 47 718-764 6-53 (91)
277 KOG2882 p-Nitrophenyl phosphat 30.1 1.9E+02 0.0041 31.8 7.7 96 703-809 21-126 (306)
278 COG1877 OtsB Trehalose-6-phosp 29.3 3.8E+02 0.0081 29.2 10.0 62 702-763 16-80 (266)
279 PF03120 DNA_ligase_OB: NAD-de 29.1 29 0.00062 30.5 1.2 23 380-402 45-68 (82)
280 cd02072 Glm_B12_BD B12 binding 29.0 3.2E+02 0.0068 26.2 8.3 69 713-785 51-127 (128)
281 TIGR03849 arch_ComA phosphosul 28.7 2E+02 0.0043 30.6 7.6 66 726-793 40-118 (237)
282 PF15584 Imm44: Immunity prote 28.6 23 0.0005 31.4 0.5 20 387-406 13-32 (94)
283 TIGR01452 PGP_euk phosphoglyco 28.6 65 0.0014 35.1 4.2 84 726-811 145-243 (279)
284 PF09874 DUF2101: Predicted me 28.1 1.9E+02 0.0041 29.8 6.9 12 383-394 180-191 (206)
285 PRK11018 hypothetical protein; 27.8 1.3E+02 0.0029 25.9 5.2 57 127-201 8-64 (78)
286 TIGR00603 rad25 DNA repair hel 27.0 2.5E+02 0.0054 35.1 9.1 77 732-814 488-568 (732)
287 cd05017 SIS_PGI_PMI_1 The memb 27.0 1.1E+02 0.0024 28.5 4.9 37 726-764 56-92 (119)
288 COG0309 HypE Hydrogenase matur 26.8 1.7E+02 0.0036 32.8 6.8 78 718-796 219-307 (339)
289 PRK14170 bifunctional 5,10-met 26.8 1.1E+02 0.0024 33.5 5.5 67 721-787 10-87 (284)
290 PF09580 Spore_YhcN_YlaJ: Spor 26.8 1.2E+02 0.0027 30.5 5.6 63 138-202 74-139 (177)
291 COG4371 Predicted membrane pro 26.7 78 0.0017 33.4 4.0 10 71-80 68-77 (334)
292 cd03420 SirA_RHOD_Pry_redox Si 26.5 1.3E+02 0.0027 25.3 4.7 54 130-201 2-55 (69)
293 PF04273 DUF442: Putative phos 26.4 1.5E+02 0.0032 27.6 5.5 75 729-804 16-102 (110)
294 PTZ00445 p36-lilke protein; Pr 26.3 1.4E+02 0.003 31.3 5.7 70 724-794 26-97 (219)
295 KOG3085 Predicted hydrolase (H 26.1 1.2E+02 0.0025 32.4 5.3 81 727-809 116-207 (237)
296 TIGR02898 spore_YhcN_YlaJ spor 25.9 1.7E+02 0.0036 29.2 6.0 56 139-194 54-109 (158)
297 PRK14188 bifunctional 5,10-met 25.8 1.4E+02 0.003 33.0 6.1 67 721-787 10-88 (296)
298 PRK14189 bifunctional 5,10-met 25.7 1.4E+02 0.0029 32.9 5.9 67 721-787 11-88 (285)
299 PRK14018 trifunctional thiored 25.7 78 0.0017 37.8 4.4 40 138-177 205-262 (521)
300 COG0084 TatD Mg-dependent DNas 25.2 1.7E+02 0.0038 31.5 6.6 72 723-796 13-94 (256)
301 TIGR00288 conserved hypothetic 25.0 2E+02 0.0043 28.8 6.3 65 731-796 70-137 (160)
302 TIGR03679 arCOG00187 arCOG0018 25.0 3.4E+02 0.0074 28.5 8.6 68 728-797 9-95 (218)
303 PLN02363 phosphoribosylanthran 24.8 2E+02 0.0043 31.1 6.9 63 714-776 69-136 (256)
304 PRK09479 glpX fructose 1,6-bis 24.7 1.6E+02 0.0034 32.6 6.0 84 719-805 161-282 (319)
305 TIGR00640 acid_CoA_mut_C methy 24.3 2.5E+02 0.0055 26.9 6.9 70 713-783 54-125 (132)
306 PHA00370 III attachment protei 23.9 1E+02 0.0022 32.7 4.2 6 143-148 150-155 (297)
307 cd03421 SirA_like_N SirA_like_ 23.8 1.1E+02 0.0024 25.3 3.8 53 130-201 2-54 (67)
308 PRK00652 lpxK tetraacyldisacch 23.7 1.6E+02 0.0034 33.1 6.1 57 779-835 70-154 (325)
309 KOG0921 Dosage compensation co 23.7 1.3E+02 0.0028 37.8 5.6 26 48-73 1152-1177(1282)
310 PF00290 Trp_syntA: Tryptophan 23.3 9.7E+02 0.021 25.9 13.0 81 721-804 121-213 (259)
311 PRK14169 bifunctional 5,10-met 23.1 1.8E+02 0.0039 31.9 6.3 67 721-787 9-86 (282)
312 COG4420 Predicted membrane pro 22.9 3.5E+02 0.0076 27.6 7.6 33 469-501 40-73 (191)
313 PF03129 HGTP_anticodon: Antic 22.9 1.9E+02 0.0041 25.4 5.5 48 717-764 3-54 (94)
314 TIGR00249 sixA phosphohistidin 22.9 3.7E+02 0.0079 26.3 8.0 76 723-798 25-110 (152)
315 TIGR01524 ATPase-IIIB_Mg magne 22.6 7.7E+02 0.017 31.8 12.7 107 330-438 96-222 (867)
316 TIGR03882 cyclo_dehyd_2 bacter 22.5 4.5E+02 0.0098 27.0 8.8 99 726-847 58-160 (193)
317 PRK11840 bifunctional sulfur c 22.4 1.1E+02 0.0024 34.0 4.4 38 723-760 177-217 (326)
318 TIGR02765 crypto_DASH cryptoch 22.3 2.8E+02 0.006 32.4 8.1 70 727-798 61-136 (429)
319 PRK05265 pyridoxine 5'-phospha 22.2 2.1E+02 0.0045 30.4 6.2 39 726-765 112-150 (239)
320 KOG3915 Transcription regulato 22.2 1E+02 0.0022 35.4 4.0 7 51-57 34-40 (641)
321 PRK00035 hemH ferrochelatase; 22.1 2.1E+02 0.0046 32.1 6.9 33 725-757 246-283 (333)
322 PRK14175 bifunctional 5,10-met 22.0 1.6E+02 0.0035 32.4 5.6 67 721-787 11-88 (286)
323 PLN02616 tetrahydrofolate dehy 22.0 1.7E+02 0.0037 33.1 5.9 68 720-787 80-159 (364)
324 COG3965 Predicted Co/Zn/Cd cat 21.9 1.9E+02 0.004 31.1 5.7 42 292-333 162-203 (314)
325 cd01423 MGS_CPS_I_III Methylgl 21.9 4.6E+02 0.0099 24.2 8.0 65 718-787 4-70 (116)
326 PRK14168 bifunctional 5,10-met 21.8 1.9E+02 0.0041 32.0 6.1 67 721-787 11-89 (297)
327 PTZ00146 fibrillarin; Provisio 21.8 99 0.0022 34.0 3.9 7 401-407 203-209 (293)
328 KOG1635 Peptide methionine sul 21.7 1.4E+02 0.003 30.0 4.4 40 138-177 31-89 (191)
329 cd00859 HisRS_anticodon HisRS 21.3 1.8E+02 0.004 24.6 5.0 47 718-764 6-53 (91)
330 COG1585 Membrane protein impli 21.3 3.8E+02 0.0083 26.1 7.5 19 376-394 110-128 (140)
331 cd01994 Alpha_ANH_like_IV This 21.2 3.9E+02 0.0084 27.5 8.0 64 727-794 75-143 (194)
332 cd01516 FBPase_glpX Bacterial 21.1 2.3E+02 0.005 31.2 6.4 83 720-805 159-279 (309)
333 COG4025 Predicted membrane pro 21.1 3.6E+02 0.0077 28.5 7.4 12 303-314 167-178 (284)
334 PLN02423 phosphomannomutase 21.1 1.8E+02 0.0039 31.1 5.8 47 705-755 8-54 (245)
335 PRK14174 bifunctional 5,10-met 20.9 1.6E+02 0.0036 32.4 5.4 67 721-787 9-87 (295)
336 PRK15108 biotin synthase; Prov 20.8 6.4E+02 0.014 28.5 10.4 122 722-849 103-256 (345)
337 PRK14184 bifunctional 5,10-met 20.7 2.2E+02 0.0047 31.4 6.2 67 721-787 9-87 (286)
338 PRK13670 hypothetical protein; 20.6 6.5E+02 0.014 29.0 10.4 93 714-806 2-112 (388)
339 PF02679 ComA: (2R)-phospho-3- 20.4 2.6E+02 0.0056 30.0 6.6 104 725-832 52-169 (244)
340 KOG3128 Uncharacterized conser 20.3 4.2E+02 0.0091 28.5 7.8 116 724-839 138-289 (298)
341 PRK15122 magnesium-transportin 20.2 4.9E+02 0.011 33.6 10.3 148 335-494 124-311 (903)
342 cd01305 archeal_chlorohydrolas 20.2 4.5E+02 0.0098 28.1 8.8 82 729-815 127-220 (263)
343 COG3981 Predicted acetyltransf 20.1 2.3E+02 0.005 28.5 5.6 60 705-764 70-156 (174)
No 1
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-140 Score=1237.87 Aligned_cols=707 Identities=41% Similarity=0.600 Sum_probs=640.0
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcc-cchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKV-IPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~-~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
.+..+.|+||+|++|+++|| .|++++||.+++||+.++++.|.||++..+ . +++.+.+++.||.+.....
T Consensus 2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~--------~~~~~~v~~~gy~~~~~~~ 72 (713)
T COG2217 2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLP--------ADIVAAVEKAGYSARLTAA 72 (713)
T ss_pred ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccH--------HHHHHHHHhcCcccccccc
Confidence 35789999999999999999 999999999999999999999999986554 3 7899999999998765111
Q ss_pred CCccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhHHHHHHHHHHhhccHHHHHH
Q 002310 205 GTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLILD 284 (937)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~ 284 (937)
. ... +.+... +. +...+++.+++.+.+..++..+..+.+. ....|+.+++++++++|.|||||+.
T Consensus 73 ~-~~~----~~~~~~--~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~v~~~~g~~f~~~ 137 (713)
T COG2217 73 L-ADP----AEAEAR--LL-RELLRRLIIAGLLTLPLLLLSLGLLLGA-------FLLPWVSFLLATPVLFYGGWPFYRG 137 (713)
T ss_pred c-cch----hhhhhh--hh-hhHHHHHHHHHHHHHHHHHHHHHhhcch-------hhHHHHHHHHHHHHHHHHhHHHHHH
Confidence 0 000 000000 01 2234567777777666655544333321 2345788999999999999999999
Q ss_pred HHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCce
Q 002310 285 GVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSK 364 (937)
Q Consensus 285 a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~ 364 (937)
+|+.++++.+|||+|+++|++++|+||.|.++.+ .||++++++++|+++|+++|.+++.|+++++++|.++.|++
T Consensus 138 a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-----~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~ 212 (713)
T COG2217 138 AWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-----VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKT 212 (713)
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCE
Confidence 9999999999999999999999999999998874 89999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEE
Q 002310 365 ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLT 444 (937)
Q Consensus 365 ~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~ 444 (937)
++++++++ ++++||+++|++||+|.|+|||+||+||+|++|++.||||+|||||.|+.|.+||.|++||+|.+|.++
T Consensus 213 A~~~~~~~---~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~ 289 (713)
T COG2217 213 ATVVRGDG---EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLT 289 (713)
T ss_pred EEEEecCC---cEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECCccEE
Confidence 99887643 389999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHH
Q 002310 445 VEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524 (937)
Q Consensus 445 ~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~a 524 (937)
++|+++|.||++++|+++++++|.+|+|+|+++||++.+|+|.++++++++|++|++++. .+|..++.++
T Consensus 290 i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~----------~~~~~a~~~a 359 (713)
T COG2217 290 IRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG----------GDWETALYRA 359 (713)
T ss_pred EEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999887653 3567899999
Q ss_pred HHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCC
Q 002310 525 CSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD 604 (937)
Q Consensus 525 i~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~ 604 (937)
+++|++ +|||||+ +++|+++.+++.+++++||++|+++++|+++++|+++||||||||+|+|+|+++...
T Consensus 360 ~avLVI---aCPCALg--LAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~----- 429 (713)
T COG2217 360 LAVLVI---ACPCALG--LATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVAL----- 429 (713)
T ss_pred Hhheee---eCccHHH--hHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecC-----
Confidence 999999 9999999 999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHH
Q 002310 605 PNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLR 684 (937)
Q Consensus 605 ~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~ 684 (937)
++ +++++|++++++|.+|+||+++||++++++.+.. ....+++++|+|+.+.++++.+.+|+++++.
T Consensus 430 --------~~-~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~~----~~~~~~~i~G~Gv~~~v~g~~v~vG~~~~~~ 496 (713)
T COG2217 430 --------DG-DEDELLALAAALEQHSEHPLAKAIVKAAAERGLP----DVEDFEEIPGRGVEAEVDGERVLVGNARLLG 496 (713)
T ss_pred --------CC-CHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCCC----CccceeeeccCcEEEEECCEEEEEcCHHHHh
Confidence 33 7889999999999999999999999999887632 2244899999999999999999999999999
Q ss_pred hcCCCCcc-hhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 685 SHGVDTST-FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 685 ~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+++.+... .+..+..+.+|.++++++.|++++|+++++|++|+|++++|++||+.|++++|+||||+.+|++||+++||
T Consensus 497 ~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 497 EEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred hcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCh
Confidence 88765543 23344556678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 764 PKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 764 ~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
+ +++|+++||||.++|++||++|++|+|||||+||+|||++||||||||+|+|+|+|+||++|++|++..+++++++|
T Consensus 577 d--~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~ls 654 (713)
T COG2217 577 D--EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLS 654 (713)
T ss_pred H--hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 7 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 844 RLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 844 R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
|+++++||||++|+|+||+++||+|+++ +++|++|+++|.+||++|++|||||+..
T Consensus 655 r~t~~~IkqNl~~A~~yn~~~iplA~~g-------~l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 655 RATRRIIKQNLFWAFGYNAIAIPLAAGG-------LLTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 9999999999999999999999999866 4789999999999999999999999753
No 2
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-137 Score=1181.52 Aligned_cols=776 Identities=39% Similarity=0.557 Sum_probs=679.9
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (937)
..++|.|.||+|.+|+.+||+.+++++||.+++|++.++++.|.||++.+.+ .++.+.+++.||++......
T Consensus 146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~p--------r~i~k~ie~~~~~~~~~~~~ 217 (951)
T KOG0207|consen 146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGP--------RDIIKAIEETGFEASVRPYG 217 (951)
T ss_pred CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccCh--------HHHHHHHHhhcccceeeecc
Confidence 5799999999999999999999999999999999999999999999999998 78999999999998765532
Q ss_pred CccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH-HHHhhh-----hhhhHHHhhhhhHHHHHHHHHHhhccH
Q 002310 206 TDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHL-SHILGA-----KASWIHVFHSTGFHLSLSLFTLLGPGF 279 (937)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~g~ 279 (937)
+....... +.++ +.+.+++.++.+..+.+++++..+ .+++.. .+.|+.+....++.++|+++++|..||
T Consensus 218 ~~~~~~~l--~~~~---ei~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~vqf~~G~ 292 (951)
T KOG0207|consen 218 DTTFKNSL--KHKE---EIRKWKRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGNSLSFVLATPVQFVGGR 292 (951)
T ss_pred ccchhhhh--hhhh---HHHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhhHHHhhhheeeEEecce
Confidence 22211111 1112 233444555555555554433321 111110 022334455568899999999999999
Q ss_pred HHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccC--cchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 002310 280 QLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLG--WKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGL 357 (937)
Q Consensus 280 ~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~--~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l 357 (937)
+||.+||++|++++.|||+|+++++.++|+||.+.....-.. |..||+++.|++.|+.+|+|+|.++++|+..++.+|
T Consensus 293 ~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskL 372 (951)
T KOG0207|consen 293 PFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKL 372 (951)
T ss_pred eeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHHHHH
Confidence 999999999999999999999999999999998766543222 789999999999999999999999999999999999
Q ss_pred hcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCcccccee
Q 002310 358 LGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSI 437 (937)
Q Consensus 358 ~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~ 437 (937)
+++.|.++.++.++. .+++|+.+.|++||+|.|+||++||+||+|++|+++||||++|||++||.|++|+.|.+||+
T Consensus 373 msl~p~~a~ii~~g~---~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsi 449 (951)
T KOG0207|consen 373 MSLAPSKATIIEDGS---EEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGESMPVPKKKGSTVIAGSI 449 (951)
T ss_pred hhcCcccceEeecCC---cceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCceecccCCCCeeeeeee
Confidence 999999999987632 38899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcH
Q 002310 438 NLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPV 517 (937)
Q Consensus 438 ~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~ 517 (937)
|.+|++.++++++|.||.++||+++++++|.+|+|+|+++|+++.||+|+++++++++|++|.+++...+.........+
T Consensus 450 N~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~ 529 (951)
T KOG0207|consen 450 NLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAF 529 (951)
T ss_pred cCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998875433332223678
Q ss_pred HHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEE
Q 002310 518 SLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVV 597 (937)
Q Consensus 518 ~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~ 597 (937)
..+|+++++||++ +|||+|+ |++|+++++++..+|++|+|+|+++++|.+.++++++||||||||+|+|.|.++.
T Consensus 530 ~~a~~~aisVlvi---ACPCaLg--LATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~ 604 (951)
T KOG0207|consen 530 SHAFQLAISVLVI---ACPCALG--LATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFK 604 (951)
T ss_pred HHHHHhhheEEEE---ECchhhh--cCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEE
Confidence 8999999999999 9999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCe--eEEEEcCeEE
Q 002310 598 TSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSG--TVAIIEDRKV 675 (937)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g--~~~~i~~~~~ 675 (937)
... +..+..+++.++++.|++++||+++||++|++............++++.||+| +...+++.++
T Consensus 605 ~~~------------~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i 672 (951)
T KOG0207|consen 605 SLS------------NPISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEV 672 (951)
T ss_pred ecC------------CcccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeEE
Confidence 873 23678999999999999999999999999999877544444446788899999 6788889999
Q ss_pred EeccHHHHHhcCCCCcc--hhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHH
Q 002310 676 SVGTIDWLRSHGVDTST--FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS 753 (937)
Q Consensus 676 ~~G~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t 753 (937)
.+|+.+|+.+++....+ .+..++.+..|++.+|++.|+++.|++.++|++|+|+..+|+.||++||+++|+||||..|
T Consensus 673 ~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~a 752 (951)
T KOG0207|consen 673 LIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAA 752 (951)
T ss_pred eechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHH
Confidence 99999999999876542 2334456678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCCh
Q 002310 754 AEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRL 833 (937)
Q Consensus 754 A~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l 833 (937)
|.++|+++||+ .|||++.|+||.++|+.+|+++++|+|||||+||+|||++|||||+||.|+++|.|+|||||+.|||
T Consensus 753 A~svA~~VGi~--~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L 830 (951)
T KOG0207|consen 753 ARSVAQQVGID--NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDL 830 (951)
T ss_pred HHHHHHhhCcc--eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccch
Confidence 99999999987 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhcccccccccc
Q 002310 834 SQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKA 913 (937)
Q Consensus 834 ~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~ 913 (937)
.+++.++++||+++++||+|+.|+++||+++||+|+|+|.|+. +.|+||.|.++|.+||+.|++|||.|++++.+....
T Consensus 831 ~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~-~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~ 909 (951)
T KOG0207|consen 831 RDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFG-IVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINK 909 (951)
T ss_pred hhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCc-cccCchHHHHHHHhhhHHHhhhHHHHhhcccccccc
Confidence 9999999999999999999999999999999999999999975 889999999999999999999999997776554221
Q ss_pred cc------CCCCCCccccccccccccccCC
Q 002310 914 SF------QAPSSRVNSNVDSHQLMDLKGK 937 (937)
Q Consensus 914 ~~------~~~~~~~~~~~~~~~~~~~~~~ 937 (937)
.. +..-.+.-.++.+|+=+|-||+
T Consensus 910 ~~~~e~~~~~~~~~~~~~~~~~~gl~~~~~ 939 (951)
T KOG0207|consen 910 LYRYEAETSSSIGQKSESVDLHRGLDDKGR 939 (951)
T ss_pred ceecccccccccccccccceEEeccccccc
Confidence 11 2222244455888887776653
No 3
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=4.2e-115 Score=1079.47 Aligned_cols=724 Identities=32% Similarity=0.480 Sum_probs=626.5
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (937)
.+.++.++||+|.+|++.+|+.+.+.+||.++++|+.++++.+... .+. +++.+.++++||.+.+.++.
T Consensus 99 ~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~---~s~--------~~I~~~I~~~Gy~a~~~~~~ 167 (834)
T PRK10671 99 DSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGS---ASP--------QDLVQAVEKAGYGAEAIEDD 167 (834)
T ss_pred ceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEcc---CCH--------HHHHHHHHhcCCCccccccc
Confidence 3678999999999999999999999999999999999999888632 222 56778889999987654321
Q ss_pred CccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH-HHHhhhhhhhHHHhhhhhH-HHHHHHHHHhhccHHHHH
Q 002310 206 TDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHL-SHILGAKASWIHVFHSTGF-HLSLSLFTLLGPGFQLIL 283 (937)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~g~~~~~ 283 (937)
..... ..+...++ +.+...+++.+++++++..++..+ ..++...+.+. ..|+ .+++++++++|+|||||+
T Consensus 168 ~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~ 239 (834)
T PRK10671 168 AKRRE-RQQETAQA---TMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNR----SLWLVIGLITLAVMVFAGGHFYR 239 (834)
T ss_pred cchhh-hhhhhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccch----hHHHHHHHHHHHHHHHhhHHHHH
Confidence 11100 00000011 112223456666655543333211 10000001111 1244 256778999999999999
Q ss_pred HHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcc----cCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhc
Q 002310 284 DGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPK----LGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLG 359 (937)
Q Consensus 284 ~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~----~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~ 359 (937)
+||++|+++.+|||+|+++|++++|++|++..+.+. .+.+.||++++++++|+++|+++|.+++.|+++.+++|.+
T Consensus 240 ~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~ 319 (834)
T PRK10671 240 SAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLD 319 (834)
T ss_pred HHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998776431 1225699999999999999999999999999999999999
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeee
Q 002310 360 ILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINL 439 (937)
Q Consensus 360 ~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~ 439 (937)
+.|++++++++ |++++|+.++|+|||+|.|++||+||+||+|++|++.||||+|||||.|+.|.+||.||+||+|.
T Consensus 320 l~p~~a~~~~~----~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~ 395 (834)
T PRK10671 320 LTPPTARVVTD----EGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQ 395 (834)
T ss_pred cCCCEEEEEeC----CcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehhhcCCCCCEecCCCCEEEecceec
Confidence 99999999876 46789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHH
Q 002310 440 NGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSL 519 (937)
Q Consensus 440 ~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~ 519 (937)
+|.++++|+++|.+|.++||++++++++.+|+++|+.+|+++.+|++++++++++++++|++.+.. ..+..
T Consensus 396 ~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~---------~~~~~ 466 (834)
T PRK10671 396 DGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPA---------PQIVY 466 (834)
T ss_pred ceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---------hHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998765321 12456
Q ss_pred HHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEec
Q 002310 520 ALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTS 599 (937)
Q Consensus 520 ~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~ 599 (937)
++.+++++|++ +|||+|+ +++|+++..++.+++++||++|+++++|+++++|++|||||||||+|+|+|.++...
T Consensus 467 ~~~~a~~vlv~---acPcaL~--la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 541 (834)
T PRK10671 467 TLVIATTVLII---ACPCALG--LATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF 541 (834)
T ss_pred HHHHHHHHHHH---hcccchh--hhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc
Confidence 78889999999 9999999 999999999999999999999999999999999999999999999999999998765
Q ss_pred CCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEecc
Q 002310 600 GSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGT 679 (937)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~ 679 (937)
.+.++.+++.+++++|.++.||+++||+++++.... ....++++.+|+|+.+.+++..+.+|+
T Consensus 542 -------------~~~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~~~----~~~~~~~~~~g~Gv~~~~~g~~~~~G~ 604 (834)
T PRK10671 542 -------------NGVDEAQALRLAAALEQGSSHPLARAILDKAGDMTL----PQVNGFRTLRGLGVSGEAEGHALLLGN 604 (834)
T ss_pred -------------CCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCC----CCcccceEecceEEEEEECCEEEEEeC
Confidence 345677899999999999999999999998864322 223578899999999999999999999
Q ss_pred HHHHHhcCCCCcchh-hHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002310 680 IDWLRSHGVDTSTFQ-EVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758 (937)
Q Consensus 680 ~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA 758 (937)
++++.+.+....... ..+..+..+.++++++.|++++|++.++|++||+++++|++|++.|++++|+|||+..++..++
T Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia 684 (834)
T PRK10671 605 QALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA 684 (834)
T ss_pred HHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 999987665432222 2233456788999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHH
Q 002310 759 SLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 759 ~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~ 838 (937)
+++||+ .+++++.|++|.++++.+|++++.|+|+|||.||+|||++|||||+||+|++.++++||++++++++..|++
T Consensus 685 ~~lgi~--~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~ 762 (834)
T PRK10671 685 KEAGID--EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVAD 762 (834)
T ss_pred HHcCCC--EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHH
Confidence 999997 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhcc
Q 002310 839 ALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRL 905 (937)
Q Consensus 839 ~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~ 905 (937)
++++||+++++|+||++|++.||+++||+|+|+++|.+|++++|++|+++|.+||++|++||+||+.
T Consensus 763 ~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~ 829 (834)
T PRK10671 763 ALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLR 829 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhcC
Confidence 9999999999999999999999999999999999998898899999999999999999999999963
No 4
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.3e-113 Score=1045.83 Aligned_cols=688 Identities=28% Similarity=0.388 Sum_probs=594.8
Q ss_pred CccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccccc
Q 002310 124 SSDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRD 203 (937)
Q Consensus 124 ~~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 203 (937)
...+..+.++||+|++|++.+|+.+.+.+||..+++++.++++.+.|++... +.+.+.+++.||++...+
T Consensus 51 ~~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~----------~~I~~aI~~~Gy~a~~~~ 120 (741)
T PRK11033 51 SGTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIR----------AQVESAVQKAGFSLRDEQ 120 (741)
T ss_pred CCceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccch----------HHHHHHHHhccccccccc
Confidence 3456789999999999999999999999999999999999999999876521 457778899999876443
Q ss_pred CCCccchhhhhHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHHhhhhhhhHHHhhhhhHHHHHHHHHHhhccHHHHH
Q 002310 204 MGTDNFFKVFETKMHEKRNRLKESGRGLAVSWALCAVCLVGHLSHILGAKASWIHVFHSTGFHLSLSLFTLLGPGFQLIL 283 (937)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~ 283 (937)
.... +...+ .++ ..++.+. + +..++..+ .+....+. ..|+.+++ ..++.||||++
T Consensus 121 ~~~~-------~~~~~---~~~--~~~~~~~--~-~~~~~~~~--~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~ 175 (741)
T PRK11033 121 AAAA-------APESR---LKS--ENLPLIT--L-AVMMAISW--GLEQFNHP-----FGQLAFIA---TTLVGLYPIAR 175 (741)
T ss_pred chhh-------hHHHH---HHH--HHHHHHH--H-HHHHHHHH--HHhhhhhH-----HHHHHHHH---HHHHHHHHHHH
Confidence 2110 00000 111 1112211 1 11111111 00000010 01333333 23677899999
Q ss_pred HHHHHHHcCCC-CchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCC
Q 002310 284 DGVKSLFKGAP-NMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILP 362 (937)
Q Consensus 284 ~a~~~l~~~~~-~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p 362 (937)
+||++++++++ |||+|++++++++++++. |++++++++++++|+++|.++++|+++.+++|.++.|
T Consensus 176 ~a~~~l~~~~~~~~~~L~~~a~~~a~~~~~-------------~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p 242 (741)
T PRK11033 176 KALRLIRSGSPFAIETLMSVAAIGALFIGA-------------TAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVP 242 (741)
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHHcc-------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999885 999999999999987652 4578899999999999999999999999999999999
Q ss_pred ceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecce
Q 002310 363 SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGT 442 (937)
Q Consensus 363 ~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~ 442 (937)
.+++++|+ |++++|++++|+|||+|.|++||+||+||+|++|++.||||+|||||.|+.|.+||.||+||+|.+|.
T Consensus 243 ~~a~vir~----g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~ 318 (741)
T PRK11033 243 ETATRLRD----GEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGEKVPAGATSVDRL 318 (741)
T ss_pred CEEEEEEC----CEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEeecccccCCCCCEecCCCCeeccCCEEcCce
Confidence 99999976 58899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHH
Q 002310 443 LTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQ 522 (937)
Q Consensus 443 ~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~ 522 (937)
++++|+++|.+|.++||.+++++++.+++|+|+.+|+++.+|+++++++++++|++|+++. +.+|..++.
T Consensus 319 ~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~----------~~~~~~~i~ 388 (741)
T PRK11033 319 VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF----------AAPWQEWIY 388 (741)
T ss_pred EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------cCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999885542 235677889
Q ss_pred HHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCc
Q 002310 523 LSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSL 602 (937)
Q Consensus 523 ~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~ 602 (937)
+++++|++ +|||+|+ +++|+++..++.+++|+||++|+++++|+|+++|++|||||||||+|+|+|.+++..
T Consensus 389 ~a~svlvi---acPcaL~--latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~--- 460 (741)
T PRK11033 389 RGLTLLLI---GCPCALV--ISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA--- 460 (741)
T ss_pred HHHHHHHH---hchhhhh--hhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEec---
Confidence 99999999 9999999 999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHH
Q 002310 603 TDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDW 682 (937)
Q Consensus 603 ~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~ 682 (937)
++.++++++.+++++|.++.||+++||++++++.+... ....++...+|+|+.+.+++..+.+|++++
T Consensus 461 ----------~~~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~~--~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~ 528 (741)
T PRK11033 461 ----------TGISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAI--PEAESQRALAGSGIEGQVNGERVLICAPGK 528 (741)
T ss_pred ----------CCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCC--CCCcceEEEeeEEEEEEECCEEEEEecchh
Confidence 34567889999999999999999999999998877652 234677888999999999999999999999
Q ss_pred HHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 002310 683 LRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG 762 (937)
Q Consensus 683 l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~G 762 (937)
+.+.. ....+..+..+.++.+++++++|++++|++.|+|++|+|++++|++|+++|++++|+|||++.+|.++|+++|
T Consensus 529 ~~~~~--~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lg 606 (741)
T PRK11033 529 LPPLA--DAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELG 606 (741)
T ss_pred hhhcc--HHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 86521 1111223345567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 002310 763 IPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 763 I~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~ 842 (937)
|+ ++++++|+||.++|+.||+. +.|+|||||+||+|||++|||||+||+|+++++++||++++++++..|++++++
T Consensus 607 i~---~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~ 682 (741)
T PRK11033 607 ID---FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIEL 682 (741)
T ss_pred CC---eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 95 78999999999999999965 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 843 SRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 843 ~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
||+++++||||+.|+++||++++|+++.+ +++||+|+++|.+||++|++||+|+..+
T Consensus 683 sr~~~~~I~~nl~~a~~~n~~~i~~a~~g-------~~~~~~a~~~~~~ss~~v~~Nslrl~~~ 739 (741)
T PRK11033 683 SRATHANIRQNITIALGLKAIFLVTTLLG-------ITGLWLAVLADSGATALVTANALRLLRK 739 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHcChHHHHHHHHHhhccc
Confidence 99999999999999999999999999743 3679999999999999999999998643
No 5
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=3.7e-101 Score=913.12 Aligned_cols=558 Identities=43% Similarity=0.657 Sum_probs=521.1
Q ss_pred ccHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcc----cCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhH
Q 002310 277 PGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPK----LGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATS 352 (937)
Q Consensus 277 ~g~~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~----~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~ 352 (937)
+|||||++||++++++++|||+|++++++++|++|++.++.+. .+++.||++++++++++++|+++|.++++|+++
T Consensus 1 ~g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~ 80 (562)
T TIGR01511 1 AGRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASD 80 (562)
T ss_pred CcHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999888642 234679999999999999999999999999999
Q ss_pred HHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCcc
Q 002310 353 DMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEV 432 (937)
Q Consensus 353 ~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v 432 (937)
.+++|.++.|.++++++++ |++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+||.|
T Consensus 81 ~~~~L~~~~p~~a~~~~~~---~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~pv~k~~gd~V 157 (562)
T TIGR01511 81 ALSKLAKLQPSTATLLTKD---GSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPV 157 (562)
T ss_pred HHHHHHhcCCCEEEEEECC---CeEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCCcEEcCCCCEE
Confidence 9999999999999999864 4678999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhc
Q 002310 433 AAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQ 512 (937)
Q Consensus 433 ~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~ 512 (937)
|+||+|.+|.++++|+++|.+|.++||.+++++++.+|+|+|+.+|+++.+|++++++++++++++|.
T Consensus 158 ~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------ 225 (562)
T TIGR01511 158 IAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------ 225 (562)
T ss_pred EeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999999999999999999999999998888773
Q ss_pred cCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccE
Q 002310 513 YGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPV 592 (937)
Q Consensus 513 ~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~ 592 (937)
.++.+++++|++ +|||+|+ +++|+++..++.+++++||++|+++++|+|+++|++|||||||||+|+|+
T Consensus 226 ------~~~~~~~svlvv---acPcaL~--la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~ 294 (562)
T TIGR01511 226 ------FALEFAVTVLII---ACPCALG--LATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPT 294 (562)
T ss_pred ------HHHHHHHHHHHH---hccchhh--hHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEE
Confidence 256789999999 9999999 99999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcC
Q 002310 593 VTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIED 672 (937)
Q Consensus 593 v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~ 672 (937)
|.++... ++.++++++.+++++|+++.||+++||++++++.+.... ...++++.+|+|+.+.+++
T Consensus 295 v~~i~~~-------------~~~~~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~~~~--~~~~~~~~~g~Gi~~~~~g 359 (562)
T TIGR01511 295 VTDVHVF-------------GDRDRTELLALAAALEAGSEHPLAKAIVSYAKEKGITLV--EVSDFKAIPGIGVEGTVEG 359 (562)
T ss_pred EEEEecC-------------CCCCHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCcC--CCCCeEEECCceEEEEECC
Confidence 9999765 334578899999999999999999999999987765432 2357888999999999999
Q ss_pred eEEEeccHHHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHH
Q 002310 673 RKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN 752 (937)
Q Consensus 673 ~~~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~ 752 (937)
+++.+|+++++.+.+..... .+.++.+.++++.|++++|++.++|++||+++++|++||+.|++++|+|||+..
T Consensus 360 ~~~~iG~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~ 433 (562)
T TIGR01511 360 TKIQLGNEKLLGENAIKIDG------KAEQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRK 433 (562)
T ss_pred EEEEEECHHHHHhCCCCCCh------hhhCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHH
Confidence 99999999999876654221 224678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC
Q 002310 753 SAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 753 tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~ 832 (937)
+++.+++++||+ +|+++.|++|.++++.+|++++.|+|||||.||++|+++|||||+||.|++.+++.||+++++++
T Consensus 434 ~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~ 510 (562)
T TIGR01511 434 TAKAVAKELGIN---VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRND 510 (562)
T ss_pred HHHHHHHHcCCc---EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCC
Confidence 999999999994 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHH
Q 002310 833 LSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIA 885 (937)
Q Consensus 833 l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a 885 (937)
+..|++++++||+++++|+||+.|+++||+++||+|+++++|+ |+.++|++|
T Consensus 511 l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~~-g~~~~p~~a 562 (562)
T TIGR01511 511 LNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYPI-GILLSPAVA 562 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-ccccCCCcC
Confidence 9999999999999999999999999999999999999999886 778999864
No 6
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.3e-92 Score=837.48 Aligned_cols=533 Identities=37% Similarity=0.531 Sum_probs=496.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCC
Q 002310 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (937)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g 375 (937)
||+|++++++.+|+++. ||+ ++++++++++++++|.++++|+++.+++|.++.|.+++|+|+ |
T Consensus 1 ~~~l~~~a~~~~~~~~~------------~~~-~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~----g 63 (536)
T TIGR01512 1 VDLLMALAALGAVAIGE------------YLE-GALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRG----G 63 (536)
T ss_pred CcHHHHHHHHHHHHHhh------------HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEC----C
Confidence 79999999999997762 454 478889999999999999999999999999999999999987 5
Q ss_pred eEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccH
Q 002310 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETA 455 (937)
Q Consensus 376 ~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~ 455 (937)
+++++++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.||+||++.+|+++++|+++|.+|.
T Consensus 64 ~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~ 143 (536)
T TIGR01512 64 SLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADST 143 (536)
T ss_pred EEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccccc
Q 002310 456 MGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSIC 535 (937)
Q Consensus 456 ~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~ 535 (937)
+||+.+++++++.+++|+|+.+++++.+|++++++++++++++|+++.. +..++.++++++++ +|
T Consensus 144 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~svlv~---~~ 208 (536)
T TIGR01512 144 IAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------------WPFWVYRALVLLVV---AS 208 (536)
T ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------cHHHHHHHHHHHhh---cC
Confidence 9999999999999999999999999999999999999988888765432 12377889999999 99
Q ss_pred ccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCC
Q 002310 536 CCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPL 615 (937)
Q Consensus 536 Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 615 (937)
||+|+ +++|+++..++.+++++|+++|+++++|+++++|++|||||||||+|+|+|.++++
T Consensus 209 P~aL~--la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~----------------- 269 (536)
T TIGR01512 209 PCALV--ISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP----------------- 269 (536)
T ss_pred ccccc--cchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH-----------------
Confidence 99999 99999999999999999999999999999999999999999999999999999863
Q ss_pred CHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCcchhh
Q 002310 616 SETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTSTFQE 695 (937)
Q Consensus 616 ~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~~~~~ 695 (937)
.+++++++++|.++.||+++||++++++.+ ...++.+.+++|+.+.+++.++.+|+++++.+.+..
T Consensus 270 --~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~------~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~------ 335 (536)
T TIGR01512 270 --AEVLRLAAAAEQASSHPLARAIVDYARKRE------NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGA------ 335 (536)
T ss_pred --HHHHHHHHHHhccCCCcHHHHHHHHHHhcC------CCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCc------
Confidence 268999999999999999999999998764 235677889999999999999999999998766542
Q ss_pred HHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCCceeEeccCh
Q 002310 696 VEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGI-GVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774 (937)
Q Consensus 696 ~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI-~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~P 774 (937)
..+..+.+.+++++|+.+.|.+.++|++||+++++|++|+++|+ +++|+|||++.++..+++++||+ .+|+++.|
T Consensus 336 --~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~~p 411 (536)
T TIGR01512 336 --RPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--EVHAELLP 411 (536)
T ss_pred --chhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--hhhhccCc
Confidence 22345678899999999999999999999999999999999999 99999999999999999999997 78999999
Q ss_pred hhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHH
Q 002310 775 NEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN 853 (937)
Q Consensus 775 e~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~n 853 (937)
++|.++++.++++++.|+|+|||.||++|+++||+||++| ++++.++++||++++++++..+.+++++||+++++|+||
T Consensus 412 ~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n 491 (536)
T TIGR01512 412 EDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQN 491 (536)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhc
Q 002310 854 LWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLR 904 (937)
Q Consensus 854 l~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~ 904 (937)
+.|++.||+++|++|+.+ +++||+|+++|.+||++|++||+|++
T Consensus 492 l~~a~~~n~~~i~~a~~G-------~~~p~~aa~~m~~ss~~v~~ns~r~~ 535 (536)
T TIGR01512 492 VVIALGIILLLILLALFG-------VLPLWLAVLGHEGSTVLVILNALRLL 535 (536)
T ss_pred HHHHHHHHHHHHHHHHHh-------hccHHHHHHHHcChHHHHHHHHHhhc
Confidence 999999999999999744 58999999999999999999999985
No 7
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=3.2e-92 Score=839.36 Aligned_cols=551 Identities=41% Similarity=0.633 Sum_probs=504.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCC
Q 002310 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (937)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g 375 (937)
||+|++++++.+|++|. |.+++++++++++++++|.++++|+++.+++|.+..|.+++++|++ |
T Consensus 1 ~d~l~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~---g 64 (556)
T TIGR01525 1 MDLLMALATIAAYAMGL-------------VLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGD---G 64 (556)
T ss_pred CcHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECC---C
Confidence 89999999999998874 3467899999999999999999999999999999999999999874 3
Q ss_pred eEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccH
Q 002310 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETA 455 (937)
Q Consensus 376 ~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~ 455 (937)
++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+.||+||.+.+|.++++|+++|.+|+
T Consensus 65 ~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~ 144 (556)
T TIGR01525 65 SEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDST 144 (556)
T ss_pred eEEEEEHHHCCCCCEEEECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccccc
Q 002310 456 MGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSIC 535 (937)
Q Consensus 456 ~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~ 535 (937)
+|++.+++++++.+++|+|+.+++++.+|+++++++++++|++|++... . .++.++++++++ +|
T Consensus 145 ~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-----------~--~~~~~~~~vlv~---~~ 208 (556)
T TIGR01525 145 LAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-----------L--GALYRALAVLVV---AC 208 (556)
T ss_pred HHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------c--hHHHHHHHHHhh---cc
Confidence 9999999999999999999999999999999999999999998876532 1 577889999999 99
Q ss_pred ccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCC
Q 002310 536 CCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPL 615 (937)
Q Consensus 536 Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 615 (937)
||+|+ +++|+++..++.+++++|+++|+++++|+++++|++|||||||||+|+|+|.++...+.. ..
T Consensus 209 P~al~--l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-----------~~ 275 (556)
T TIGR01525 209 PCALG--LATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA-----------SI 275 (556)
T ss_pred ccchh--ehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC-----------Cc
Confidence 99999 999999999999999999999999999999999999999999999999999999865210 01
Q ss_pred CHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccCC-ceEEecCCeeEEEEcC-eEEEeccHHHHHhcCCCCcch
Q 002310 616 SETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVADG-TFIEEPGSGTVAIIED-RKVSVGTIDWLRSHGVDTSTF 693 (937)
Q Consensus 616 ~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~-~~~~~~g~g~~~~i~~-~~~~~G~~~~l~~~~~~~~~~ 693 (937)
++++++.+++.+|.++.||+++||++++++.+.+... . ++.+.+++|+.+.+++ .++.+|+++++..........
T Consensus 276 ~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~---~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~ 352 (556)
T TIGR01525 276 SEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPK---QEDVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISAS 352 (556)
T ss_pred cHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCccc---ccCeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhh
Confidence 2678899999999999999999999999887654321 3 6678899999999999 799999999984322221111
Q ss_pred -hhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCceeEec
Q 002310 694 -QEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQG-IGVYMLSGDKKNSAEYVASLVGIPKDKVLSG 771 (937)
Q Consensus 694 -~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aG-I~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar 771 (937)
+..+....++.+.++++.|++++|.+.++|++||+++++|+.|+++| ++++|+|||+..++.++++++|++ .+|++
T Consensus 353 ~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~ 430 (556)
T TIGR01525 353 PDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAE 430 (556)
T ss_pred HHHHHHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeecc
Confidence 12233445788999999999999999999999999999999999999 999999999999999999999997 89999
Q ss_pred cChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHH
Q 002310 772 VKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVK 851 (937)
Q Consensus 772 ~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~ 851 (937)
+.|++|.++++.+|+.++.|+|+|||.||++|+++|||||++|++++.+++.||+++.++++..+++++++||+++++|+
T Consensus 431 ~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~ 510 (556)
T TIGR01525 431 LLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIK 510 (556)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccccccchHH-HHHHHhhhhHHHHHHHHhhh
Q 002310 852 QNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPS-IAGALMGLSSIGVMANSLLL 903 (937)
Q Consensus 852 ~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~-~a~~~m~~ssl~v~~nsl~l 903 (937)
||+.|+++||++++++|+++ +++|+ +|+++|.+||++|++||+|+
T Consensus 511 ~nl~~a~~~N~~~i~~a~~g-------~~~p~~~aa~~m~~ss~~v~lns~r~ 556 (556)
T TIGR01525 511 QNLAWALGYNLVAIPLAAGG-------LLPLWLLAVLLHEGSTVLVVLNSLRL 556 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------hcCHHHHHHHHHhchHHHHHHHhhcC
Confidence 99999999999999999866 36896 99999999999999999985
No 8
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=2e-92 Score=862.79 Aligned_cols=508 Identities=23% Similarity=0.275 Sum_probs=446.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEe
Q 002310 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVR 406 (937)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll 406 (937)
.++++++++++++..++.++++++++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|+
T Consensus 56 ~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rd----g~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi 131 (755)
T TIGR01647 56 VDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRD----GKWQEIPASELVPGDVVRLKIGDIVPADCRLF 131 (755)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC----CEEEEEEhhhCcCCCEEEECCCCEEeceEEEE
Confidence 34567777888888899999999999999999999999999987 58999999999999999999999999999999
Q ss_pred ecc-eeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Q 002310 407 AGR-STVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFT 485 (937)
Q Consensus 407 ~G~-~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~ 485 (937)
+|+ +.||||+|||||.|+.|.+|+.+|+||.+.+|+++++|++||.+|.+|+|.+++++++.+++|+|+.+++++.+++
T Consensus 132 ~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~ 211 (755)
T TIGR01647 132 EGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLI 211 (755)
T ss_pred ecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHH
Confidence 998 8999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcC
Q 002310 486 YGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRG 565 (937)
Q Consensus 486 ~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~ 565 (937)
+++++++++++++|++.. +.++..++.++++++++ +|||+|+ +++|+++..+..+++|+|+++|+
T Consensus 212 ~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~~i~vlv~---a~P~~Lp--~~~~~~la~g~~r~ak~gilvk~ 276 (755)
T TIGR01647 212 VLIGVLVLIELVVLFFGR----------GESFREGLQFALVLLVG---GIPIAMP--AVLSVTMAVGAAELAKKKAIVTR 276 (755)
T ss_pred HHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHH---hCCcchH--HHHHHHHHHHHHHHHhCCeEEcc
Confidence 999988888888776521 23567888999999999 9999999 99999999999999999999999
Q ss_pred chHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhc-ccCCCCChHHHHHHHHH
Q 002310 566 GNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGV-ESNTVHPIGKAIVEAAE 644 (937)
Q Consensus 566 ~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~-e~~s~hP~~~Ai~~~a~ 644 (937)
++++|+||++|+||||||||||+|+|+|.+++..+ +..++++++.+++.+ +..+.||+++||+++++
T Consensus 277 l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~------------~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~ 344 (755)
T TIGR01647 277 LTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFF------------NGFDKDDVLLYAALASREEDQDAIDTAVLGSAK 344 (755)
T ss_pred cHHHHhccCCcEEEecCCCccccCceEEEEEEecC------------CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999998652 114566788887755 57889999999999887
Q ss_pred hcCCcc---ccccCCceEEecCCeeEEEEc----CeE--EEeccHHHHHhcCCCCcch-----hhHHHHHhCCCeEEEEE
Q 002310 645 FSNCQN---VKVADGTFIEEPGSGTVAIIE----DRK--VSVGTIDWLRSHGVDTSTF-----QEVEMEDLMNQSLVYVG 710 (937)
Q Consensus 645 ~~~~~~---~~~~~~~~~~~~g~g~~~~i~----~~~--~~~G~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~v~ 710 (937)
+.+... .......|. ..++++.+.++ ++. +.||+++++.+.|...... +..++...+|.++++++
T Consensus 345 ~~~~~~~~~~~~~~~pf~-~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA 423 (755)
T TIGR01647 345 DLKEARDGYKVLEFVPFD-PVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVA 423 (755)
T ss_pred HhHHHHhcCceEEEeccC-CCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 543100 001001111 14566666663 433 6789999999988643211 12234556788999998
Q ss_pred E-----CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 711 V-----DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 711 ~-----~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
+ +.+++|+++|+||+|||++++|++||++||+|+|+|||++.||.++|+++||...
T Consensus 424 ~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~ 503 (755)
T TIGR01647 424 RTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSG 503 (755)
T ss_pred EEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHH
Confidence 7 2389999999999999999999999999999999999999999999999999641
Q ss_pred ---------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHH
Q 002310 767 ---------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLL 837 (937)
Q Consensus 767 ---------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~ 837 (937)
.+|||++|+||.++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||+||++|+|+.|+
T Consensus 504 ~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~ 583 (755)
T TIGR01647 504 ELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 583 (755)
T ss_pred HHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHH
Confidence 29999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 838 VALELSRLTMKTVKQNLWWAFGYNIVGIP 866 (937)
Q Consensus 838 ~~i~~~R~~~~~i~~nl~~a~~~Nii~i~ 866 (937)
+++++||++++|||||+.|.++.|+..+.
T Consensus 584 ~ai~~gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 584 DAILESRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 99999999999999999999999986554
No 9
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5.7e-91 Score=822.87 Aligned_cols=492 Identities=24% Similarity=0.297 Sum_probs=416.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCc-eEEE-EecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc
Q 002310 332 LIAFVLLGKNLEQRAKIKATSDMTGLLGILPS-KARL-LVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409 (937)
Q Consensus 332 il~~~llg~~le~~~~~k~~~~l~~l~~~~p~-~~~v-~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~ 409 (937)
+++..+++.++|.++++|+++.+++|+++.|+ ++++ .|+ |++++|++++|+|||+|.|++||+|||||+|++|+
T Consensus 72 l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rd----g~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~ 147 (673)
T PRK14010 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQD----GSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL 147 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeC----CEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc
Confidence 33445689999999999999999999999986 7874 444 58999999999999999999999999999999999
Q ss_pred eeeeeccccCCCcccccCCC---CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHH
Q 002310 410 STVDESSFTGEPLPVTKIPE---SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTY 486 (937)
Q Consensus 410 ~~VDeS~LTGEs~pv~K~~g---~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~ 486 (937)
+.||||+|||||.|+.|.+| +.||+||.+.+|+++++|+++|.+|++|||++++++++.+|+|+|...+.+...+
T Consensus 148 ~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l-- 225 (673)
T PRK14010 148 ATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTL-- 225 (673)
T ss_pred eEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHH--
Confidence 99999999999999999999 8899999999999999999999999999999999999999999996655443222
Q ss_pred HHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCc
Q 002310 487 GVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGG 566 (937)
Q Consensus 487 ~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~ 566 (937)
.+.++.+++|++.... + ..+...+.+.+++++. +|||+++ ..+|++...++.+++|+|+++|++
T Consensus 226 ---~ii~l~~~~~~~~~~~------~--~~~~~~~~~~val~V~---~IP~aL~--~~~~~~~~~g~~r~ak~gvLvk~~ 289 (673)
T PRK14010 226 ---TIIFLVVILTMYPLAK------F--LNFNLSIAMLIALAVC---LIPTTIG--GLLSAIGIAGMDRVTQFNILAKSG 289 (673)
T ss_pred ---hHHHHHHHHHHHHHHh------h--ccHHHHHHHHHHHHHH---hhhhhHH--HHHHHHHHHHHHHHhhCCEEEeCc
Confidence 2222222222211000 0 0223455566777777 8999999 999999999999999999999999
Q ss_pred hHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhc
Q 002310 567 NILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFS 646 (937)
Q Consensus 567 ~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~ 646 (937)
+++|++|++|++|||||||||+|++.+.++.+. .+.+.++++..++.++..+.||+++||++++++.
T Consensus 290 ~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~-------------~~~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~ 356 (673)
T PRK14010 290 RSVETCGDVNVLILDKTGTITYGNRMADAFIPV-------------KSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQ 356 (673)
T ss_pred HHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeC-------------CCccHHHHHHHHHHhcCCCCChHHHHHHHHHHHc
Confidence 999999999999999999999999888887643 2334567888888888899999999999999877
Q ss_pred CCccccccCC--ceEEe-cCCeeEEEEcCeEEEeccHHHHHhcCCCC----c-ch-hhHHHHHhCCCeEEEEEECCEEEE
Q 002310 647 NCQNVKVADG--TFIEE-PGSGTVAIIEDRKVSVGTIDWLRSHGVDT----S-TF-QEVEMEDLMNQSLVYVGVDNMLAG 717 (937)
Q Consensus 647 ~~~~~~~~~~--~~~~~-~g~g~~~~i~~~~~~~G~~~~l~~~~~~~----~-~~-~~~~~~~~~~~~~~~v~~~~~~lG 717 (937)
+++......+ .|... .++|+ .++++.+.||+++++.+.|... . .. +..++...+|.+++++..|++++|
T Consensus 357 ~~~~~~~~~~~~pF~~~~k~~gv--~~~g~~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG 434 (673)
T PRK14010 357 HIDLPQEVGEYIPFTAETRMSGV--KFTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILG 434 (673)
T ss_pred CCCchhhhcceeccccccceeEE--EECCEEEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEE
Confidence 6542111111 12111 13344 3677889999999998766421 1 11 122334567889999999999999
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCC
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDG 797 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG 797 (937)
+++++|++|||++++|++||++||+++|+||||+.||.+||+++||+ ++|||++||||.++|+.+|++|++|+|+|||
T Consensus 435 ~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDG 512 (673)
T PRK14010 435 VIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--RFVAECKPEDKINVIREEQAKGHIVAMTGDG 512 (673)
T ss_pred EEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--eEEcCCCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 99999999999999999999999999999999999999999999997 7999999999999999999999999999999
Q ss_pred cccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 798 INDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNI 862 (937)
Q Consensus 798 ~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Ni 862 (937)
+||+|||++||||||||+|+|+|+++||+||++|||+.|++++++||++|.|+++.+.|.++.|+
T Consensus 513 vNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~ 577 (673)
T PRK14010 513 TNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDI 577 (673)
T ss_pred hhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccH
Confidence 99999999999999999999999999999999999999999999999999999999999999887
No 10
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5e-90 Score=815.52 Aligned_cols=513 Identities=25% Similarity=0.342 Sum_probs=430.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCc-eEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEE
Q 002310 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPS-KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405 (937)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~-~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvl 405 (937)
...+.+++.++++.++|.+++.|+++.+++|+++.|+ +++++|++ +++++|++++|++||+|.|++||+||+||+|
T Consensus 67 ~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g---~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~v 143 (679)
T PRK01122 67 AITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREP---GAAEEVPATELRKGDIVLVEAGEIIPADGEV 143 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECC---CEEEEEEHHHcCCCCEEEEcCCCEEEEEEEE
Confidence 3445666677899999999999999999999999886 79998763 2488999999999999999999999999999
Q ss_pred eecceeeeeccccCCCcccccCCCCc---cccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHH
Q 002310 406 RAGRSTVDESSFTGEPLPVTKIPESE---VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSG 482 (937)
Q Consensus 406 l~G~~~VDeS~LTGEs~pv~K~~g~~---v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~ 482 (937)
++|.+.||||+|||||.|+.|.+|+. ||+||.|.+|.++++|+++|.+|.++||++++++++.+|+|+|...+.+..
T Consensus 144 ieG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~ 223 (679)
T PRK01122 144 IEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLA 223 (679)
T ss_pred EEccEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHH
Confidence 99999999999999999999999998 999999999999999999999999999999999999999999988887766
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEE
Q 002310 483 HFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLL 562 (937)
Q Consensus 483 ~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gil 562 (937)
+++.+.+++++..+.++++. +.+ .++.++++++++ +|||+++ .++|+....++.+++|+|++
T Consensus 224 ~l~~i~l~~~~~~~~~~~~~-----------g~~--~~l~~~iallV~---aiP~alg--~l~~~i~i~g~~r~ak~gvL 285 (679)
T PRK01122 224 GLTIIFLLVVATLPPFAAYS-----------GGA--LSITVLVALLVC---LIPTTIG--GLLSAIGIAGMDRVLQANVI 285 (679)
T ss_pred hhhHHHHHHHHHHHHHHHHh-----------Cch--HHHHHHHHHHHH---cccchhh--hHHHHHHHHHHHHHhcCCee
Confidence 66544433332222221111 112 267788999999 9999999 99999999999999999999
Q ss_pred EcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHH
Q 002310 563 LRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEA 642 (937)
Q Consensus 563 vk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~ 642 (937)
+|+++++|++|++|++|||||||||+|+|+++++++. .+.++++++..++.++..+.||.++||+++
T Consensus 286 vk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-------------~~~~~~~ll~~a~~~s~~s~hP~~~AIv~~ 352 (679)
T PRK01122 286 ATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPV-------------PGVTEEELADAAQLSSLADETPEGRSIVVL 352 (679)
T ss_pred ecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeC-------------CCCCHHHHHHHHHHhcCCCCCchHHHHHHH
Confidence 9999999999999999999999999999999998764 335567889999999999999999999999
Q ss_pred HHh-cCCccccc--cCCceEEe-cCCeeEE-EEcCeEEEeccHHHHHhcCCC----Cc-ch-hhHHHHHhCCCeEEEEEE
Q 002310 643 AEF-SNCQNVKV--ADGTFIEE-PGSGTVA-IIEDRKVSVGTIDWLRSHGVD----TS-TF-QEVEMEDLMNQSLVYVGV 711 (937)
Q Consensus 643 a~~-~~~~~~~~--~~~~~~~~-~g~g~~~-~i~~~~~~~G~~~~l~~~~~~----~~-~~-~~~~~~~~~~~~~~~v~~ 711 (937)
+++ .+...... ....+... ..++..+ .++++.+.||+++.+.+.|.. .. .. +..++.+.+|.++++++.
T Consensus 353 a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~ 432 (679)
T PRK01122 353 AKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAE 432 (679)
T ss_pred HHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEE
Confidence 876 23321110 01112111 2233333 367888999999987665521 11 11 122344567889999999
Q ss_pred CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEE
Q 002310 712 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVV 791 (937)
Q Consensus 712 ~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~V 791 (937)
|++++|+++++|++|||++++|++||++||+++|+||||+.||.+||+++||+ +++||++||||.++|+.+|++|+.|
T Consensus 433 ~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A~~~PedK~~iV~~lQ~~G~~V 510 (679)
T PRK01122 433 DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLAEATPEDKLALIRQEQAEGRLV 510 (679)
T ss_pred CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHHHHcCCeE
Confidence 99999999999999999999999999999999999999999999999999997 8999999999999999999999999
Q ss_pred EEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-----HHH
Q 002310 792 AMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQN-LWWAFGYNI-----VGI 865 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~n-l~~a~~~Ni-----i~i 865 (937)
+|+|||+||+|||++||||||||+|+|+|+|+||+||++|||+.|++++++||++. ..|.. -.|++. |- ..+
T Consensus 511 aMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~-~tr~~~~~f~~~-n~~~~~~~i~ 588 (679)
T PRK01122 511 AMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLL-MTRGALTTFSIA-NDVAKYFAII 588 (679)
T ss_pred EEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHH-hhhHhhhhhhHH-HHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 34444 455554 53 345
Q ss_pred HHHhhhhhcccc
Q 002310 866 PIAAGVLLPVTG 877 (937)
Q Consensus 866 ~la~~~~~~~~g 877 (937)
|..+...||-.+
T Consensus 589 p~~~~~~~~~~~ 600 (679)
T PRK01122 589 PAMFAATYPQLN 600 (679)
T ss_pred HHHHHhhCcccc
Confidence 555555666544
No 11
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=9e-90 Score=848.75 Aligned_cols=559 Identities=20% Similarity=0.255 Sum_probs=461.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCC--CCeEEEEeCCCccCCcEEEEcCCCEEeeeEE
Q 002310 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDA--KDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (937)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~--~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgv 404 (937)
..+++++++++++.+++.++++|+++.+++|.++.|.+++|+|+++. +|++++|+++||+|||+|.|++||+|||||+
T Consensus 123 ~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~ 202 (902)
T PRK10517 123 FAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLR 202 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEE
Confidence 35678888999999999999999999999999999999999987321 1578999999999999999999999999999
Q ss_pred Eeecc-eeeeeccccCCCcccccCCCC-------------ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccC
Q 002310 405 VRAGR-STVDESSFTGEPLPVTKIPES-------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470 (937)
Q Consensus 405 ll~G~-~~VDeS~LTGEs~pv~K~~g~-------------~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~ 470 (937)
|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|++||.+|.+|+|.+++++++.++
T Consensus 203 li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~ 282 (902)
T PRK10517 203 ILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEP 282 (902)
T ss_pred EEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCC
Confidence 99997 699999999999999999875 6999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHH
Q 002310 471 APVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSY 550 (937)
Q Consensus 471 ~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~ 550 (937)
+|+|+.+|+++.++..++++++.++++++.+.. .+|..++.+++++++. +|||+|+ +++++++.
T Consensus 283 t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~-----------~~~~~~l~~alsv~V~---~~Pe~LP--~~vt~~la 346 (902)
T PRK10517 283 NAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK-----------GDWWEAALFALSVAVG---LTPEMLP--MIVTSTLA 346 (902)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc-----------CCHHHHHHHHHHHHHH---HcccHHH--HHHHHHHH
Confidence 999999999999998888888777776654322 2467788899999999 9999998 99999999
Q ss_pred HHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhc---
Q 002310 551 VGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGV--- 627 (937)
Q Consensus 551 ~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~--- 627 (937)
.+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.++... .+.+.++++.+++..
T Consensus 347 ~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~-------------~~~~~~~ll~~a~l~~~~ 413 (902)
T PRK10517 347 RGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI-------------SGKTSERVLHSAWLNSHY 413 (902)
T ss_pred HHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC-------------CCCCHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999987532 122345677766542
Q ss_pred ccCCCCChHHHHHHHHHhcCCccccccCCceEEec----CCeeEEEEc---C--eEEEeccHHHHHhcCCCCc------c
Q 002310 628 ESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP----GSGTVAIIE---D--RKVSVGTIDWLRSHGVDTS------T 692 (937)
Q Consensus 628 e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~----g~g~~~~i~---~--~~~~~G~~~~l~~~~~~~~------~ 692 (937)
+....||++.|++++++..+..........+.+.| .+++...++ + ..+.||+++.+.+.|.... +
T Consensus 414 ~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 493 (902)
T PRK10517 414 QTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVP 493 (902)
T ss_pred CCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeec
Confidence 23457999999999887543111111111222333 344444442 2 3488999999988875321 1
Q ss_pred h-----hh----HHHHHhCCCeEEEEEE----------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEc
Q 002310 693 F-----QE----VEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS 747 (937)
Q Consensus 693 ~-----~~----~~~~~~~~~~~~~v~~----------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlT 747 (937)
. ++ .+....+|.+++++++ |++|+|+++|+||+|||++++|++|+++||+|+|+|
T Consensus 494 l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miT 573 (902)
T PRK10517 494 LDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILT 573 (902)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEc
Confidence 1 01 1234567888888874 568999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCc-----------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHH
Q 002310 748 GDKKNSAEYVASLVGIPKD-----------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAAL 804 (937)
Q Consensus 748 GD~~~tA~~iA~~~GI~~~-----------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL 804 (937)
|||+.||.+||+++||..+ .||||++|+||.++|+.||++|++|+|+|||+||+|||
T Consensus 574 GD~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPAL 653 (902)
T PRK10517 574 GDSELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPAL 653 (902)
T ss_pred CCCHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHH
Confidence 9999999999999999621 79999999999999999999999999999999999999
Q ss_pred HhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHH
Q 002310 805 ASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSI 884 (937)
Q Consensus 805 ~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~ 884 (937)
++||||||||+|+|+|+++||+||++|||..|++++++||++++||+|++.|.++.|+..+...+...+. .+ ..|+.
T Consensus 654 k~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~-~~--~~pl~ 730 (902)
T PRK10517 654 RAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAF-LP--FLPML 730 (902)
T ss_pred HhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-hh--hhhhH
Confidence 9999999999999999999999999999999999999999999999999999999998554433211110 11 13666
Q ss_pred HHHHhhhhHHHHHHHHhhhccccccccccccCCCCC
Q 002310 885 AGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSS 920 (937)
Q Consensus 885 a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~ 920 (937)
+..++...-+.- +.++-|. ..+..++.+++||+
T Consensus 731 ~~qiL~inl~~D-~~~~al~--~d~~~~~~m~~p~r 763 (902)
T PRK10517 731 PLHLLIQNLLYD-VSQVAIP--FDNVDDEQIQKPQR 763 (902)
T ss_pred HHHHHHHHHHHH-HhHHhhc--CCCCChhhhcCCCC
Confidence 666666665655 3355554 44455556788887
No 12
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.3e-89 Score=848.16 Aligned_cols=558 Identities=20% Similarity=0.262 Sum_probs=458.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCC--CCCeEEEEeCCCccCCcEEEEcCCCEEeeeE
Q 002310 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDND--AKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (937)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~--~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDg 403 (937)
|..+++++++++++.+++.++++|+++++++|.++.+.+++|+|+-. .+|++++|+++||+|||+|.|++||+|||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg 167 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADA 167 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccE
Confidence 33566777888888889999999999999999999999999998210 0268999999999999999999999999999
Q ss_pred EEeecc-eeeeeccccCCCcccccCCCC-------------ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhcc
Q 002310 404 VVRAGR-STVDESSFTGEPLPVTKIPES-------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSR 469 (937)
Q Consensus 404 vll~G~-~~VDeS~LTGEs~pv~K~~g~-------------~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~ 469 (937)
+|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|||.+++++ +..
T Consensus 168 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~ 246 (867)
T TIGR01524 168 RVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RRG 246 (867)
T ss_pred EEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CCC
Confidence 999997 599999999999999999875 59999999999999999999999999999999988 777
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHH
Q 002310 470 EAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYS 549 (937)
Q Consensus 470 ~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~ 549 (937)
++|+|+.+++++.++.+++++++.+++++|.+.. .+|..++.+++++++. +|||+|+ +++++++
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-----------~~~~~~~~~al~l~v~---~iP~~Lp--~~vt~~l 310 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK-----------GDWLEAFLFALAVAVG---LTPEMLP--MIVSSNL 310 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc-----------CCHHHHHHHHHHHHHH---hCcchHH--HHHHHHH
Confidence 8999999999999999988888887777664432 2456788899999999 9999998 9999999
Q ss_pred HHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHh---
Q 002310 550 YVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAG--- 626 (937)
Q Consensus 550 ~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~--- 626 (937)
..+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.+++.. .+.+.++++.+++.
T Consensus 311 a~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~-------------~~~~~~~~l~~a~l~~~ 377 (867)
T TIGR01524 311 AKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDS-------------SGETSERVLKMAWLNSY 377 (867)
T ss_pred HHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecC-------------CCCCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999998642 12234567766653
Q ss_pred cccCCCCChHHHHHHHHHhcCCccccccCCceEEec----CCeeEEEEcC-----eEEEeccHHHHHhcCCCCc------
Q 002310 627 VESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEP----GSGTVAIIED-----RKVSVGTIDWLRSHGVDTS------ 691 (937)
Q Consensus 627 ~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~----g~g~~~~i~~-----~~~~~G~~~~l~~~~~~~~------ 691 (937)
.+..+.||+++|+++++..............+.+.| ++++.+.+++ ..+.||+++.+.+.|....
T Consensus 378 ~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~ 457 (867)
T TIGR01524 378 FQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVV 457 (867)
T ss_pred CCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCcee
Confidence 233467999999999887532111111112233334 4566665543 2489999999988775321
Q ss_pred ch-----h----hHHHHHhCCCeEEEEEE----------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEE
Q 002310 692 TF-----Q----EVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYML 746 (937)
Q Consensus 692 ~~-----~----~~~~~~~~~~~~~~v~~----------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~ml 746 (937)
+. + ..+....+|.+++++++ |.+|+|+++|+||+|+|++++|++||++||+|+|+
T Consensus 458 ~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmi 537 (867)
T TIGR01524 458 TLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVL 537 (867)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEE
Confidence 00 1 11234567888888886 23799999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCc-----------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHH
Q 002310 747 SGDKKNSAEYVASLVGIPKD-----------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAA 803 (937)
Q Consensus 747 TGD~~~tA~~iA~~~GI~~~-----------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~A 803 (937)
|||++.||.+||+++||..+ .||||++|+||.++|+.||++|++|+|+|||+||+||
T Consensus 538 TGD~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapA 617 (867)
T TIGR01524 538 TGDNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPA 617 (867)
T ss_pred cCCCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHH
Confidence 99999999999999999621 7999999999999999999999999999999999999
Q ss_pred HHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhccccccchH
Q 002310 804 LASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLPVTGTMLTP 882 (937)
Q Consensus 804 L~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~~~~~~~g~~l~P 882 (937)
|++||||||||+|+|+|+++||+||++|+|+.|++++++||++++||+||+.|.++.|+..+...+ +.++ . ...|
T Consensus 618 Lk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~---~-~~~p 693 (867)
T TIGR01524 618 LRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF---I-PFLP 693 (867)
T ss_pred HHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---h-hhhh
Confidence 999999999999999999999999999999999999999999999999999999988875443322 1111 1 1246
Q ss_pred HHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCC
Q 002310 883 SIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSS 920 (937)
Q Consensus 883 ~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~ 920 (937)
+.+..+....-+.- +.++.|. ..+...+.+++||+
T Consensus 694 l~~~qil~inl~~d-~~~~al~--~~~~~~~~m~~p~~ 728 (867)
T TIGR01524 694 MLSLHLLIQNLLYD-FSQLTLP--WDKMDREFLKKPHQ 728 (867)
T ss_pred HHHHHHHHHHHHHH-HHHHhhc--CCCCChHhhCCCCC
Confidence 66666666665666 4565554 44555555676665
No 13
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.2e-89 Score=849.21 Aligned_cols=568 Identities=20% Similarity=0.255 Sum_probs=462.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCC--CCCeEEEEeCCCccCCcEEEEcCCCEEeeeE
Q 002310 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDND--AKDSIIEVPCNSLHVGDHIVVLPGDRIPADG 403 (937)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~--~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDg 403 (937)
|..+++++++++++.+++.++++|+++++++|.++.|.+++|+|++. .+|++++|+++||+|||+|.|++||+|||||
T Consensus 111 ~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg 190 (903)
T PRK15122 111 LTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADV 190 (903)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeE
Confidence 34567788888999999999999999999999999999999998731 1257899999999999999999999999999
Q ss_pred EEeecc-eeeeeccccCCCcccccCC-----------------------CCccccceeeecceEEEEEEecCCccHHHHH
Q 002310 404 VVRAGR-STVDESSFTGEPLPVTKIP-----------------------ESEVAAGSINLNGTLTVEVRRPGGETAMGDI 459 (937)
Q Consensus 404 vll~G~-~~VDeS~LTGEs~pv~K~~-----------------------g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i 459 (937)
+|++|+ +.||||+|||||.|+.|.+ ++.+|+||.+.+|+++++|++||.+|.+|||
T Consensus 191 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI 270 (903)
T PRK15122 191 RLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270 (903)
T ss_pred EEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHH
Confidence 999997 5899999999999999975 2679999999999999999999999999999
Q ss_pred HHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccccccccc
Q 002310 460 VRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLS 539 (937)
Q Consensus 460 ~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal 539 (937)
.+++++ ...++|+|+.++++..++..+.+.++.+++++.++. +.++..++.+++++++. +|||+|
T Consensus 271 ~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-----------~~~~~~~l~~aisl~V~---~~Pe~L 335 (903)
T PRK15122 271 AKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-----------KGDWLEALLFALAVAVG---LTPEML 335 (903)
T ss_pred HHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-----------cCCHHHHHHHHHHHHHH---HccchH
Confidence 999987 566789999999998887776665555444432221 13567788899999999 999999
Q ss_pred chhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHH
Q 002310 540 MCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETE 619 (937)
Q Consensus 540 ~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 619 (937)
+ +++++++..+..+++++|+++|+.+++|+||++|+||||||||||+|+|+|.+++.. .+.++++
T Consensus 336 p--~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~-------------~~~~~~~ 400 (903)
T PRK15122 336 P--MIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDV-------------SGRKDER 400 (903)
T ss_pred H--HHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcC-------------CCCChHH
Confidence 9 999999999999999999999999999999999999999999999999999998753 1123355
Q ss_pred HHHHHHh---cccCCCCChHHHHHHHHHhcCCccccccCCceEEecCCeeE---E-EE---cCe--EEEeccHHHHHhcC
Q 002310 620 ILKFAAG---VESNTVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGSGTV---A-II---EDR--KVSVGTIDWLRSHG 687 (937)
Q Consensus 620 ll~~aa~---~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~g~~---~-~i---~~~--~~~~G~~~~l~~~~ 687 (937)
++.+++. .+..+.||+++|+++++...+..........+.+.|+.+.. . .+ +++ .+.||+++.+.+.|
T Consensus 401 ~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c 480 (903)
T PRK15122 401 VLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVA 480 (903)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhc
Confidence 6666653 23456899999999999876543111112334455544322 1 12 333 36789999998887
Q ss_pred CCCc------chh---------hHHHHHhCCCeEEEEEE------------------CCEEEEEEEecCcCChhHHHHHH
Q 002310 688 VDTS------TFQ---------EVEMEDLMNQSLVYVGV------------------DNMLAGLIYVEDRIRDDAAHVVN 734 (937)
Q Consensus 688 ~~~~------~~~---------~~~~~~~~~~~~~~v~~------------------~~~~lG~i~l~D~lr~~a~e~I~ 734 (937)
.... +.+ ..+....+|.+++++++ |++|+|+++|+||+|||++++|+
T Consensus 481 ~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~ 560 (903)
T PRK15122 481 THVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIA 560 (903)
T ss_pred hhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHH
Confidence 5321 111 12234567888888874 45899999999999999999999
Q ss_pred HHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-----------------------ceeEeccChhhHHHHHHHHhcCCCEE
Q 002310 735 SLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-----------------------DKVLSGVKPNEKKRFINELQNDENVV 791 (937)
Q Consensus 735 ~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-----------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~V 791 (937)
+||++||+|+|+||||+.||.+||+++||.. ..||||++|+||.++|+.||++|++|
T Consensus 561 ~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vV 640 (903)
T PRK15122 561 ALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTV 640 (903)
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEE
Confidence 9999999999999999999999999999962 16999999999999999999999999
Q ss_pred EEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Q 002310 792 AMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-G 870 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~ 870 (937)
+|+|||+||+|||++||||||||+|+|+|+++||+||++|||+.|++++++||++++||+|++.|.++.|+..+...+ +
T Consensus 641 amtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~ 720 (903)
T PRK15122 641 GFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVA 720 (903)
T ss_pred EEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999975543322 1
Q ss_pred hhhccccccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCcccccccccc
Q 002310 871 VLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 871 ~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (937)
.++ + ...|+.+..+.+..-+.-. .++-|. ..+...+.+ +||++.+..++++.+
T Consensus 721 ~~~---~-~~~pl~~~qil~~nli~D~-~~lal~--~d~~~~~~m-~~P~~~~~~~~~~~~ 773 (903)
T PRK15122 721 SAF---I-PFLPMLAIHLLLQNLMYDI-SQLSLP--WDKMDKEFL-RKPRKWDAKNIGRFM 773 (903)
T ss_pred HHH---h-ccchhHHHHHHHHHHHHHH-HHHhhc--CCCCCHhhc-CCCCCCChhhhHHHH
Confidence 111 1 1246666666665555553 455554 444555557 888888888877654
No 14
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=5.1e-88 Score=843.84 Aligned_cols=586 Identities=18% Similarity=0.186 Sum_probs=461.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcC-CCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee
Q 002310 329 PIMLIAFVLLGKNLEQRAKIKATSDMTGLLGI-LPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA 407 (937)
Q Consensus 329 ~~~il~~~llg~~le~~~~~k~~~~l~~l~~~-~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~ 407 (937)
++++++.+++...+...+..++++.+++|.+. .+.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|++
T Consensus 131 ~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd----G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~ 206 (941)
T TIGR01517 131 GVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG----GQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS 206 (941)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC----CEEEEEeHHHCCCCCEEEECCCCEecccEEEEE
Confidence 34444444444444455555566666666653 4778999987 589999999999999999999999999999999
Q ss_pred c-ceeeeeccccCCCcccccCCCCc--cccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Q 002310 408 G-RSTVDESSFTGEPLPVTKIPESE--VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHF 484 (937)
Q Consensus 408 G-~~~VDeS~LTGEs~pv~K~~g~~--v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~ 484 (937)
| ++.||||+|||||.|+.|.+++. +|+||.+.+|.++++|++||.+|.+|||.+++++++ +++|+|+.+++++.++
T Consensus 207 g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~ 285 (941)
T TIGR01517 207 GLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLI 285 (941)
T ss_pred cCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHH
Confidence 9 79999999999999999998877 999999999999999999999999999999998765 5679999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhc-c-cccc---hhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcC
Q 002310 485 TYGVIALSAATFVFWNLFGA-H-VLPT---AIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATR 559 (937)
Q Consensus 485 ~~~vl~la~~~~i~~~~~~~-~-~~~~---~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~ 559 (937)
.++++++++++|++|++... . .... .-..+.++...+.++++++++ +|||+|+ +++|+++..++.+++++
T Consensus 286 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~---~iP~~Lp--~~vti~l~~~~~~mak~ 360 (941)
T TIGR01517 286 GKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVV---AVPEGLP--LAVTIALAYSMKKMMKD 360 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHh---hCCCchH--HHHHHHHHHHHHHHHhC
Confidence 99988888888877643210 0 0000 000123567788899999999 9999999 99999999999999999
Q ss_pred cEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhccc----------
Q 002310 560 GLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVES---------- 629 (937)
Q Consensus 560 gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~---------- 629 (937)
|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..++.+........ ...+++..++.+..
T Consensus 361 ~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~s~~~~~~~~~~ 439 (941)
T TIGR01517 361 NNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPK-HVRNILVEGISLNSSSEEVVDRGG 439 (941)
T ss_pred CCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCH-HHHHHHHHHHHhCCCCccccCCCC
Confidence 9999999999999999999999999999999999999875433322111000000 11223322222211
Q ss_pred ---CCCCChHHHHHHHHHhcCCcccc-------ccCCceEE-ecCCeeEEEEcCe---EEEeccHHHHHhcCCCC-----
Q 002310 630 ---NTVHPIGKAIVEAAEFSNCQNVK-------VADGTFIE-EPGSGTVAIIEDR---KVSVGTIDWLRSHGVDT----- 690 (937)
Q Consensus 630 ---~s~hP~~~Ai~~~a~~~~~~~~~-------~~~~~~~~-~~g~g~~~~i~~~---~~~~G~~~~l~~~~~~~----- 690 (937)
...+|++.|++++++..+.+... .....|.. ..+.++....++. .+.||+++.+...|...
T Consensus 440 ~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g 519 (941)
T TIGR01517 440 KRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNG 519 (941)
T ss_pred ccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCC
Confidence 12568899999998866543211 11112222 1233444444332 48899999998877431
Q ss_pred --cch--------hhHHHHHhCCCeEEEEEE----------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEE
Q 002310 691 --STF--------QEVEMEDLMNQSLVYVGV----------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVY 744 (937)
Q Consensus 691 --~~~--------~~~~~~~~~~~~~~~v~~----------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~ 744 (937)
.+. +..+++..+|.+++.+++ |++|+|+++++||+|+|++++|+.||++||+|+
T Consensus 520 ~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~ 599 (941)
T TIGR01517 520 EATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVR 599 (941)
T ss_pred CcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEE
Confidence 000 112345567888887764 448999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCc-------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcc
Q 002310 745 MLSGDKKNSAEYVASLVGIPKD-------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGIN 799 (937)
Q Consensus 745 mlTGD~~~tA~~iA~~~GI~~~-------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~N 799 (937)
|+|||++.||.+||+++||.+. .||||++|+||.++|+.||++|++|+|||||+|
T Consensus 600 miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 600 MVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred EECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999999631 699999999999999999999999999999999
Q ss_pred cHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 002310 800 DAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGT 878 (937)
Q Consensus 800 Da~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~ 878 (937)
|+|||++|||||||| +|+|+|+++||++|++|+|+.|++++++||+++++|+||+.|+++||+..+++++.+.+ ++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~--~~- 756 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSC--IS- 756 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-
Confidence 999999999999999 99999999999999999999999999999999999999999999999998888764332 22
Q ss_pred cchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCccccccccc
Q 002310 879 MLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQ 930 (937)
Q Consensus 879 ~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (937)
.-.|+-+..+..++-+...+.++.|... ++..+.+++||.+.+....+..
T Consensus 757 ~~~pl~~~qil~inl~~d~~~al~l~~e--~~~~~lm~~~P~~~~~~li~~~ 806 (941)
T TIGR01517 757 STSPLTAVQLLWVNLIMDTLAALALATE--PPTEALLDRKPIGRNAPLISRS 806 (941)
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHccC--CccHHHHhCCCCCCCCCcCCHH
Confidence 1347777777777778888888887644 4445568889988777776654
No 15
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.3e-86 Score=782.47 Aligned_cols=516 Identities=27% Similarity=0.373 Sum_probs=432.1
Q ss_pred hhhhHH--HHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCce-EEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEee
Q 002310 325 FFEEPI--MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSK-ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPA 401 (937)
Q Consensus 325 ~f~~~~--~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~-~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPa 401 (937)
||+..+ .+++.++++.++|.++++|+++.+++|.+..|++ ++++|++ |++++|++++|+|||+|.|++||+||+
T Consensus 64 ~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~d---g~~~~V~~~~L~~GDiV~V~~Gd~IPa 140 (675)
T TIGR01497 64 LFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDD---GAIDKVPADQLKKGDIVLVEAGDVIPC 140 (675)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeC---CEEEEEEHHHCCCCCEEEECCCCEEee
Confidence 454433 3344478999999999999999999999998874 8787643 588999999999999999999999999
Q ss_pred eEEEeecceeeeeccccCCCcccccCCCCc---cccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHH
Q 002310 402 DGVVRAGRSTVDESSFTGEPLPVTKIPESE---VAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLAD 478 (937)
Q Consensus 402 Dgvll~G~~~VDeS~LTGEs~pv~K~~g~~---v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d 478 (937)
||+|++|++.||||+|||||.|+.|.+|+. ||+||.+.+|.++++|+++|.+|+++||++++++++.+|+|+|...+
T Consensus 141 DG~vieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~ 220 (675)
T TIGR01497 141 DGEVIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALT 220 (675)
T ss_pred eEEEEEccEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHH
Confidence 999999999999999999999999999985 99999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhc
Q 002310 479 QVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGAT 558 (937)
Q Consensus 479 ~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~ 558 (937)
.+..++..+.+ ++. +.+|.+.. +.+. ..++.++++++++ +|||+++ ...|.....++.+++|
T Consensus 221 ~l~~~l~~v~l-i~~--~~~~~~~~--------~~~~--~~~~~~lvallV~---aiP~aLg--~l~~av~iag~~r~ar 282 (675)
T TIGR01497 221 ILLIALTLVFL-LVT--ATLWPFAA--------YGGN--AISVTVLVALLVC---LIPTTIG--GLLSAIGIAGMDRVLG 282 (675)
T ss_pred HHHHHHHHHHH-HHH--HHHHHHHH--------hcCh--hHHHHHHHHHHHH---hCchhhh--hHHHHHHHHHHHHHHH
Confidence 76655433322 222 22232211 0111 2356677889999 9999998 7888888889999999
Q ss_pred CcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHH
Q 002310 559 RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKA 638 (937)
Q Consensus 559 ~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~A 638 (937)
+|+++|+++++|++|++|++|||||||||+|+|++.++++. .+.++++++.+++.++..++||+++|
T Consensus 283 ~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-------------~~~~~~~ll~~aa~~~~~s~hP~a~A 349 (675)
T TIGR01497 283 FNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA-------------QGVDEKTLADAAQLASLADDTPEGKS 349 (675)
T ss_pred CCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec-------------CCCcHHHHHHHHHHhcCCCCCcHHHH
Confidence 99999999999999999999999999999999999999864 33466789999999999999999999
Q ss_pred HHHHHHhcCCccccc--cCCceEEecCC-eeEEE--EcCeEEEeccHHHHHhcCC----CCc-c-hhhHHHHHhCCCeEE
Q 002310 639 IVEAAEFSNCQNVKV--ADGTFIEEPGS-GTVAI--IEDRKVSVGTIDWLRSHGV----DTS-T-FQEVEMEDLMNQSLV 707 (937)
Q Consensus 639 i~~~a~~~~~~~~~~--~~~~~~~~~g~-g~~~~--i~~~~~~~G~~~~l~~~~~----~~~-~-~~~~~~~~~~~~~~~ 707 (937)
|++++++.+.+.... ...++...++. ++.+. .+++.+.+|+++++.+.+. ... . .+..++...++.+++
T Consensus 350 iv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l 429 (675)
T TIGR01497 350 IVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPL 429 (675)
T ss_pred HHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEE
Confidence 999998766543211 11234444444 45543 3678899999988765432 111 1 122334567788999
Q ss_pred EEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC
Q 002310 708 YVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND 787 (937)
Q Consensus 708 ~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~ 787 (937)
+++.|++++|+++++|++|||++++|++||++||+++|+|||+..||.++|+++||+ ++++|++|+||.++|+.+|++
T Consensus 430 ~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~~~PedK~~~v~~lq~~ 507 (675)
T TIGR01497 430 VVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAEATPEDKIALIRQEQAE 507 (675)
T ss_pred EEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcCCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999997 899999999999999999999
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
Q 002310 788 ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNI----V 863 (937)
Q Consensus 788 G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Ni----i 863 (937)
|+.|+|+|||+||+|||++|||||||++|+++|+++||++|++|||++|++++++||+++-+...-..|++.-++ .
T Consensus 508 g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 508 GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999888877788876443 3
Q ss_pred HHHHHhhhhhccc
Q 002310 864 GIPIAAGVLLPVT 876 (937)
Q Consensus 864 ~i~la~~~~~~~~ 876 (937)
.+|..+...||..
T Consensus 588 ~~~~~~~~~~~~~ 600 (675)
T TIGR01497 588 IIPAIFAAAYPQL 600 (675)
T ss_pred HHHHHHHhhCcch
Confidence 4454444455543
No 16
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.5e-86 Score=823.90 Aligned_cols=577 Identities=21% Similarity=0.279 Sum_probs=464.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc
Q 002310 330 IMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409 (937)
Q Consensus 330 ~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~ 409 (937)
+.+++++++...+..++++|+++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|++|+
T Consensus 84 ~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRd----g~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~ 159 (884)
T TIGR01522 84 VSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIRE----GKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV 159 (884)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC
Confidence 33333444444555556667788899999999999999987 58999999999999999999999999999999995
Q ss_pred -eeeeeccccCCCcccccCCCC--------------ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHH
Q 002310 410 -STVDESSFTGEPLPVTKIPES--------------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQ 474 (937)
Q Consensus 410 -~~VDeS~LTGEs~pv~K~~g~--------------~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~ 474 (937)
+.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|++||.+|.+|+|.+++++++..++|+|
T Consensus 160 ~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq 239 (884)
T TIGR01522 160 DLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239 (884)
T ss_pred ceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHH
Confidence 899999999999999999874 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHH
Q 002310 475 RLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTS 554 (937)
Q Consensus 475 ~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~ 554 (937)
+.+++++.+++++++++++++++++++. +.++..++.++++++++ +|||+|+ +++|+++..+..
T Consensus 240 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~v~llv~---aiP~~Lp--~~vt~~l~~~~~ 303 (884)
T TIGR01522 240 KSMDLLGKQLSLVSFGVIGVICLVGWFQ-----------GKDWLEMFTISVSLAVA---AIPEGLP--IIVTVTLALGVL 303 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------cCCHHHHHHHHHHHHHH---HccchHH--HHHHHHHHHHHH
Confidence 9999999999887766555555443322 23467788899999999 9999999 999999999999
Q ss_pred hhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCC-C-----CCC------CCC-CCCC--HHH
Q 002310 555 LGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDP-N-----SKQ------NPI-HPLS--ETE 619 (937)
Q Consensus 555 ~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~-~-----~~~------~~~-~~~~--~~~ 619 (937)
+++++|+++|+.+++|+||++|+||||||||||+|+|+|.+++..+..+.. + ... ... ...+ ..+
T Consensus 304 r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (884)
T TIGR01522 304 RMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSR 383 (884)
T ss_pred HHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHH
Confidence 999999999999999999999999999999999999999999875432110 0 000 000 0011 134
Q ss_pred HHHHHHhcccC---------CCCChHHHHHHHHHhcCCccccccCCceEEecCC------eeEEEE--cC--eEEEeccH
Q 002310 620 ILKFAAGVESN---------TVHPIGKAIVEAAEFSNCQNVKVADGTFIEEPGS------GTVAII--ED--RKVSVGTI 680 (937)
Q Consensus 620 ll~~aa~~e~~---------s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~~~g~------g~~~~i--~~--~~~~~G~~ 680 (937)
++..++.+... ..||+++|++++++..+.+........+.+.|.. ++.... ++ ..+.||++
T Consensus 384 ~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGap 463 (884)
T TIGR01522 384 ILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAY 463 (884)
T ss_pred HHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCCh
Confidence 44444332211 1359999999999876654211111233444432 222222 23 24789999
Q ss_pred HHHHhcCCCCc-------ch---------hhHHHHHhCCCeEEEEEECC-----EEEEEEEecCcCChhHHHHHHHHHhC
Q 002310 681 DWLRSHGVDTS-------TF---------QEVEMEDLMNQSLVYVGVDN-----MLAGLIYVEDRIRDDAAHVVNSLSSQ 739 (937)
Q Consensus 681 ~~l~~~~~~~~-------~~---------~~~~~~~~~~~~~~~v~~~~-----~~lG~i~l~D~lr~~a~e~I~~L~~a 739 (937)
+.+...|.... +. +..++...+|.++++++++. +|+|+++++||+|||++++|+.|+++
T Consensus 464 e~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~ 543 (884)
T TIGR01522 464 EQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG 543 (884)
T ss_pred HHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC
Confidence 99988775321 01 11123456788999998754 89999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------------eeEeccChhhHHHHHHHHhcCCCEEEEE
Q 002310 740 GIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------KVLSGVKPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 740 GI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
||+++|+|||++.||.++|+++||.+. .||||++|+||.++|+.||+.|++|+||
T Consensus 544 Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 544 GVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 999999999999999999999999631 5999999999999999999999999999
Q ss_pred cCCcccHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 002310 795 GDGINDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLL 873 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~ 873 (937)
|||+||+|||++|||||+|| +|+|+++++||++|++|+|+.|++++++||++++|||||+.|+++.|+..+.+.+..
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~-- 701 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALA-- 701 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH--
Confidence 99999999999999999999 799999999999999999999999999999999999999999999999877654322
Q ss_pred ccccccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCcccccccccc
Q 002310 874 PVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 874 ~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (937)
.+++ ...|+.+..+..++-+...+.++.|.+ .++..+.+++||.+.+..+.++.|
T Consensus 702 ~~~~-~~~pl~~~qiL~inl~~d~~~a~~l~~--e~~~~~~m~~~P~~~~~~~~~~~~ 756 (884)
T TIGR01522 702 TLMG-FPNPLNAMQILWINILMDGPPAQSLGV--EPVDKDVMRKPPRPRNDKILTKDL 756 (884)
T ss_pred HHHc-CCCchhHHHHHHHHHHHHhhHHHHhcc--CCCChhHhhCCCCCCCCCccCHHH
Confidence 1233 235777777777888888888877765 444555689999988888877654
No 17
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-87 Score=761.60 Aligned_cols=588 Identities=22% Similarity=0.301 Sum_probs=465.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEE
Q 002310 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405 (937)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvl 405 (937)
|+++..|.+.+.+...+..++++++++++++|+++.|+.++|+|+ |+.+.++++||||||||.++-||+||||.+|
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~----gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl 153 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRS----GKLQHILARELVPGDIVELKVGDKIPADLRL 153 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEec----CcccceehhccCCCCEEEEecCCccccceeE
Confidence 556666666666666666777778889999999999999999998 5899999999999999999999999999999
Q ss_pred eecc-eeeeeccccCCCcccccCCC--------------CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccC
Q 002310 406 RAGR-STVDESSFTGEPLPVTKIPE--------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSRE 470 (937)
Q Consensus 406 l~G~-~~VDeS~LTGEs~pv~K~~g--------------~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~ 470 (937)
++-. ..||||.|||||.|+.|... +.+|+||.+..|.++++|+.||.+|.+|+|.+.+++.++.|
T Consensus 154 ~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~k 233 (972)
T KOG0202|consen 154 IEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPK 233 (972)
T ss_pred EeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCC
Confidence 9764 68999999999999999542 34899999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcccccchhccC---CcHHHHHHHHHHHHhhcccccccccchhhHHH
Q 002310 471 APVQRLADQVSGHFTYGVIALSAATFVFW-NLFGAHVLPTAIQYG---GPVSLALQLSCSVLRKETSICCCLSMCPWLSH 546 (937)
Q Consensus 471 ~~l~~~~d~~~~~~~~~vl~la~~~~i~~-~~~~~~~~~~~~~~~---~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p 546 (937)
+|+|+..|++...+..++.++++.+++.- .++. .|. ..| ..+...|..++++-+. ++|.+|+ ..+.
T Consensus 234 TPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~---~p~--~~g~~fk~~~~~f~IaVsLAVA---AIPEGLP--aVvT 303 (972)
T KOG0202|consen 234 TPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL---DPV--HGGSWFKGALYYFKIAVSLAVA---AIPEGLP--AVVT 303 (972)
T ss_pred CcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc---ccc--ccccchhchhhhhhHHHHHHHH---hccCCCc--chhh
Confidence 99999999999998876666666555441 1111 010 111 2445667788888888 9999999 9999
Q ss_pred HHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCC-------------C---CCC
Q 002310 547 AYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPN-------------S---KQN 610 (937)
Q Consensus 547 ~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~-------------~---~~~ 610 (937)
+.++.+..+|+|++++||...++|+||.+++||+|||||||+|+|.+.+++..+..+... . +++
T Consensus 304 ~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~ 383 (972)
T KOG0202|consen 304 TTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDG 383 (972)
T ss_pred hhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecC
Confidence 999999999999999999999999999999999999999999999999999865433221 0 000
Q ss_pred ---CCCCCCHH---HHHHHHHhc-----ccC-------CCCChHHHHHHHHHhcCCccccccCC----------------
Q 002310 611 ---PIHPLSET---EILKFAAGV-----ESN-------TVHPIGKAIVEAAEFSNCQNVKVADG---------------- 656 (937)
Q Consensus 611 ---~~~~~~~~---~ll~~aa~~-----e~~-------s~hP~~~Ai~~~a~~~~~~~~~~~~~---------------- 656 (937)
.......+ +++..++.+ +++ ...|.+.|+...+++.++........
T Consensus 384 ~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~ 463 (972)
T KOG0202|consen 384 LYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLF 463 (972)
T ss_pred ccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhh
Confidence 00111222 233333222 222 34799999999998877654221011
Q ss_pred -ceEEec---C-CeeEEEE----c---CeEEEeccHHHHHhcCCCCc--------chh---------hHHHHHhCCCeEE
Q 002310 657 -TFIEEP---G-SGTVAII----E---DRKVSVGTIDWLRSHGVDTS--------TFQ---------EVEMEDLMNQSLV 707 (937)
Q Consensus 657 -~~~~~~---g-~g~~~~i----~---~~~~~~G~~~~l~~~~~~~~--------~~~---------~~~~~~~~~~~~~ 707 (937)
...+.| . +.+...+ . ...+.||++|.+.++|.... +.. ...+...++.+++
T Consensus 464 ~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvL 543 (972)
T KOG0202|consen 464 KKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVL 543 (972)
T ss_pred hheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEE
Confidence 001111 1 1122222 1 24589999999999884211 111 1122344566666
Q ss_pred EEEE------------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 708 YVGV------------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 708 ~v~~------------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
.++. |++|+|++++.||+|++++++|+.|+++||+|+|+|||+++||++||+++||
T Consensus 544 alA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 544 ALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred EEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 6553 6789999999999999999999999999999999999999999999999999
Q ss_pred CCc-----------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 764 PKD-----------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 764 ~~~-----------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
..+ .+|+|++|++|.+||+.||++|.+|||+|||+||+||||.||||||||
T Consensus 624 ~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 624 FSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred CcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeec
Confidence 421 699999999999999999999999999999999999999999999999
Q ss_pred -CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhH
Q 002310 815 -GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSS 893 (937)
Q Consensus 815 -~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ss 893 (937)
+|||+||++||+||.||||+.|+.++++||.+|+|||+++.|.++.|+..+.+-+ +...+|+ -.|+.+..+.+..-
T Consensus 704 ~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~--l~aa~~~-p~pL~pvQiLWiNl 780 (972)
T KOG0202|consen 704 ISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIF--LTAAFGI-PEPLIPVQILWINL 780 (972)
T ss_pred CCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHH--HHHHhCC-CCcccchhhheeee
Confidence 9999999999999999999999999999999999999999999999985443221 1112342 26777777888776
Q ss_pred HHHHHHHhhhccccccccccccCCCCCCccccccccccc
Q 002310 894 IGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLM 932 (937)
Q Consensus 894 l~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (937)
+.--..|..| .+.+..+|.+++||++.+.+++++.|+
T Consensus 781 vtDG~PA~aL--G~ep~D~DiM~kpPR~~~~~iit~~l~ 817 (972)
T KOG0202|consen 781 VTDGPPATAL--GFEPVDPDIMKKPPRDSKDGIITGWLI 817 (972)
T ss_pred eccCCchhhc--CCCCCChhHHhCCCCCCCCCeeeHHHH
Confidence 6666666655 456778889999999999999999875
No 18
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-86 Score=748.04 Aligned_cols=555 Identities=21% Similarity=0.230 Sum_probs=453.3
Q ss_pred CceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeec-ceeeeeccccCCCcccccCC--CCccccceee
Q 002310 362 PSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG-RSTVDESSFTGEPLPVTKIP--ESEVAAGSIN 438 (937)
Q Consensus 362 p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G-~~~VDeS~LTGEs~pv~K~~--g~~v~aGt~~ 438 (937)
..+..|+|+ |+.++|++.||+||||+.|+.||+|||||++++| ++.||||++||||++++|.. +.++++||.+
T Consensus 219 ~~k~~ViR~----G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv 294 (1034)
T KOG0204|consen 219 NIKFQVIRG----GRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKV 294 (1034)
T ss_pred ceEEEEEEC----CEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeeccee
Confidence 457788887 6999999999999999999999999999999999 47999999999999999976 6789999999
Q ss_pred ecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cc------ccc
Q 002310 439 LNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGA---HV------LPT 509 (937)
Q Consensus 439 ~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~---~~------~~~ 509 (937)
.+|++++.|+.+|.+|..|+++..+.+....++|+|-.+++++..+..+.+.+|++++++...... .. +..
T Consensus 295 ~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~ 374 (1034)
T KOG0204|consen 295 MEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTW 374 (1034)
T ss_pred ecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccc
Confidence 999999999999999999999999999888999999999999999999999888888876543321 10 000
Q ss_pred hhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCC
Q 002310 510 AIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIG 589 (937)
Q Consensus 510 ~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~ 589 (937)
.-.....+...|..++.++++ |+|.+|+ ||+.++++.++.+|.+.+.++|..+++|+||..++||+|||||||.|
T Consensus 375 ~~~~~~~~v~~f~i~VTilVV---AVPEGLP--LAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N 449 (1034)
T KOG0204|consen 375 SDEYIQEFVKFFIIAVTILVV---AVPEGLP--LAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTN 449 (1034)
T ss_pred cHHHHHHHHHHhhheeEEEEE---ECCCCcc--HHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEee
Confidence 000122356667778888999 9999999 99999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEecCCcCCCCCCCCCCCCCCHH--HHHHHHHhc---------------ccCCCCChHHHHHHHHHhcCCcccc
Q 002310 590 RPVVTKVVTSGSLTDPNSKQNPIHPLSET--EILKFAAGV---------------ESNTVHPIGKAIVEAAEFSNCQNVK 652 (937)
Q Consensus 590 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~--~ll~~aa~~---------------e~~s~hP~~~Ai~~~a~~~~~~~~~ 652 (937)
+|.|++.+..++.++.+.... ...++. +++-..-+. .....+|.++||+.+....|.+...
T Consensus 450 ~MtVV~~~~~~~~~k~~~~~~--~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~ 527 (1034)
T KOG0204|consen 450 RMTVVQSYIGSEHYKVNSPKS--SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD 527 (1034)
T ss_pred eEEEEeeeeccccccccCccc--ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh
Confidence 999999999887777554431 223332 222111111 2234689999999999887776433
Q ss_pred ccCC-c------eEEec-CCeeEEEE-cCe--EEEeccHHHHHhcCCCCc-------chhh---------HHHHHhCCCe
Q 002310 653 VADG-T------FIEEP-GSGTVAII-EDR--KVSVGTIDWLRSHGVDTS-------TFQE---------VEMEDLMNQS 705 (937)
Q Consensus 653 ~~~~-~------~~~~~-g~g~~~~i-~~~--~~~~G~~~~l~~~~~~~~-------~~~~---------~~~~~~~~~~ 705 (937)
.+.+ . |.... ..|+.... ++. .+.||+.|.+...|..+. ++.+ .+..+.++.+
T Consensus 528 ~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LR 607 (1034)
T KOG0204|consen 528 VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLR 607 (1034)
T ss_pred hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhh
Confidence 3221 1 11111 22444333 222 589999999999886432 1111 2234455666
Q ss_pred EEEEEE---------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 706 LVYVGV---------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 706 ~~~v~~---------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
.+.+++ +.+++|+++++||+|||++++|+.|+++||+|.|+||||..||++||.+|||.
T Consensus 608 ti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 608 TICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGIL 687 (1034)
T ss_pred eeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccc
Confidence 666654 34799999999999999999999999999999999999999999999999993
Q ss_pred C---------------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CC
Q 002310 765 K---------------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GG 816 (937)
Q Consensus 765 ~---------------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~g 816 (937)
. -+|+||.+|.||+.+|+.|+++|++||.+|||+||+|||++||||.||| .|
T Consensus 688 t~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaG 767 (1034)
T KOG0204|consen 688 TPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAG 767 (1034)
T ss_pred cCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccc
Confidence 2 1799999999999999999999999999999999999999999999999 99
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHH
Q 002310 817 VGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGV 896 (937)
Q Consensus 817 t~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v 896 (937)
|++|||+|||||+||||++|+++++|||+.|.+|+|+++|+++.|++++.+++-.- ...| =+|+-|..+.+..-|+-
T Consensus 768 TeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A-~~~~--dsPLtAVQlLWVNLIMD 844 (1034)
T KOG0204|consen 768 TEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSA-CATG--DSPLTAVQLLWVNLIMD 844 (1034)
T ss_pred hhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhh-hhcC--CccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998887775322 1234 37999999999999999
Q ss_pred HHHHhhhccccccccccccCCCCCCccccccccccc
Q 002310 897 MANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLM 932 (937)
Q Consensus 897 ~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (937)
.+-||.|+.+.|.+. .++++|--.+...+|..|+
T Consensus 845 TLgALALATepPt~~--Lm~RkP~GR~~~LIt~tMw 878 (1034)
T KOG0204|consen 845 TLGALALATEPPTDE--LMKRKPVGRTKPLITRTMW 878 (1034)
T ss_pred HHHHHHhccCCCChH--HhcCCCCCCCCcchHHHHH
Confidence 999999876644444 5777777666666666554
No 19
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-85 Score=807.33 Aligned_cols=573 Identities=24% Similarity=0.307 Sum_probs=455.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecce-e
Q 002310 333 IAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS-T 411 (937)
Q Consensus 333 l~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~-~ 411 (937)
++++.+...+..++..|+.+.+++|++..+.+++|+|+ |++++|+++||+|||+|.+++||+||||++|++++. .
T Consensus 110 ~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~----g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~ 185 (917)
T COG0474 110 LLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRD----GKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLE 185 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeC----CcEEEecHHHCCCCcEEEECCCCccccceEEEEecCce
Confidence 33344444444555566777888888888999999996 699999999999999999999999999999999987 9
Q ss_pred eeeccccCCCcccccCC--------------CCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHH
Q 002310 412 VDESSFTGEPLPVTKIP--------------ESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLA 477 (937)
Q Consensus 412 VDeS~LTGEs~pv~K~~--------------g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~ 477 (937)
||||+|||||.|+.|.+ .+.+|+||.+.+|.+.+.|++||.+|.+|++.+++......++|+|+.+
T Consensus 186 VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l 265 (917)
T COG0474 186 VDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKL 265 (917)
T ss_pred EEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHH
Confidence 99999999999999963 4678999999999999999999999999999999998878899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhh
Q 002310 478 DQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGA 557 (937)
Q Consensus 478 d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a 557 (937)
+++..++..+.+++++++++..++.+. .+|...+.+++++.+. ++|.+|+ ..+.++++.+..+++
T Consensus 266 ~~~~~~l~~~~l~~~~~~~~~~~~~~~----------~~~~~~~~~~v~l~va---~IPegLp--~~vti~la~g~~~ma 330 (917)
T COG0474 266 NKLGKFLLVLALVLGALVFVVGLFRGG----------NGLLESFLTALALAVA---AVPEGLP--AVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----------ccHHHHHHHHHHHHHh---ccccchH--HHHHHHHHHHHHHHH
Confidence 999999999888888888877644322 2267889999999999 9999999 999999999999999
Q ss_pred cCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCH--HHHHHHHHhc---ccC--
Q 002310 558 TRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSE--TEILKFAAGV---ESN-- 630 (937)
Q Consensus 558 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~--~~ll~~aa~~---e~~-- 630 (937)
++++++|+++++|+||++++||+|||||||+|+|+|.+++..+...+.. ......+. .+++..++.+ ...
T Consensus 331 k~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~lc~~~~~~~~ 407 (917)
T COG0474 331 KDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID---DKDLKDSPALLRFLLAAALCNSVTPEKN 407 (917)
T ss_pred hccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc---ccccccchHHHHHHHHHHhcCccccccc
Confidence 9999999999999999999999999999999999999999884100000 00001111 1122211111 122
Q ss_pred ----CCCChHHHHHHHHHhcCC--ccccccCC--ceEEec---CCe-eEEEEc---C--eEEEeccHHHHHhcCCCC---
Q 002310 631 ----TVHPIGKAIVEAAEFSNC--QNVKVADG--TFIEEP---GSG-TVAIIE---D--RKVSVGTIDWLRSHGVDT--- 690 (937)
Q Consensus 631 ----s~hP~~~Ai~~~a~~~~~--~~~~~~~~--~~~~~~---g~g-~~~~i~---~--~~~~~G~~~~l~~~~~~~--- 690 (937)
..+|.+.||++.+++.+. +....... ...+.| .+. +...++ + ..++||+++.+.+.|...
T Consensus 408 ~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~ 487 (917)
T COG0474 408 GWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGEL 487 (917)
T ss_pred CceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcc
Confidence 569999999999998776 32211111 122333 222 223332 2 248999999998866521
Q ss_pred cch-----hh----HHHHHhCCCeE-----------------EEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEE
Q 002310 691 STF-----QE----VEMEDLMNQSL-----------------VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVY 744 (937)
Q Consensus 691 ~~~-----~~----~~~~~~~~~~~-----------------~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~ 744 (937)
.+. +. ..+...+|.++ ...+.|..|+|+++++||||+|++++|+.|+++||+||
T Consensus 488 ~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 488 EPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 000 10 11111112111 24566789999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCc---------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCC
Q 002310 745 MLSGDKKNSAEYVASLVGIPKD---------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDG 797 (937)
Q Consensus 745 mlTGD~~~tA~~iA~~~GI~~~---------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG 797 (937)
|+||||+.||++||++|||..+ .||||++|+||.++|+.||+.|++|+|+|||
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDG 647 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDG 647 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 9999999999999999997322 5899999999999999999999999999999
Q ss_pred cccHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 002310 798 INDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVT 876 (937)
Q Consensus 798 ~NDa~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~ 876 (937)
+||+||||+|||||||| +|+|+|+++||+++++|+|..+..++++||++|.|+++.+.|.+.+|+..+.+.+.. .++
T Consensus 648 vNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~--~~~ 725 (917)
T COG0474 648 VNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIY--SLF 725 (917)
T ss_pred chhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 99999999999999998 799999999999999999999999999999999999999999999999855443321 112
Q ss_pred cccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCcccccccccc
Q 002310 877 GTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 877 g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (937)
+....|+.+..++...-+...+.++.|.... +..+.++.||.+-+.++++..+
T Consensus 726 ~~~~~p~~~~qll~inll~d~~pa~~L~~~~--~~~~~m~~~~~~p~~~i~~~~~ 778 (917)
T COG0474 726 NLFFLPLTPLQLLWINLLTDSLPALALGVED--PESDVMKRPPRGPEEGLFNRKI 778 (917)
T ss_pred hcccccHHHHHHHHHHHHHhhhhhheeecCC--CcccccccCCCCccccccchhH
Confidence 3224578888888888888888888886664 4455677777777766665543
No 20
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=8.3e-83 Score=798.83 Aligned_cols=580 Identities=20% Similarity=0.249 Sum_probs=468.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEE
Q 002310 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGV 404 (937)
Q Consensus 325 ~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgv 404 (937)
+|..++++++++++...+..+++.|+.+.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+
T Consensus 103 ~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRd----g~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~ 178 (997)
T TIGR01106 103 NLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRD----GEKMSINAEQVVVGDLVEVKGGDRIPADLR 178 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC----CEEEEeeHHHCCCCCEEEECCCCEEeeeEE
Confidence 3445667777888888899999999999999999999999999987 589999999999999999999999999999
Q ss_pred Eeecc-eeeeeccccCCCcccccCCCC----------ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChH
Q 002310 405 VRAGR-STVDESSFTGEPLPVTKIPES----------EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPV 473 (937)
Q Consensus 405 ll~G~-~~VDeS~LTGEs~pv~K~~g~----------~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l 473 (937)
|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|++.+++++++.+++|+
T Consensus 179 il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl 258 (997)
T TIGR01106 179 IISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPI 258 (997)
T ss_pred EEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcH
Confidence 99996 699999999999999998874 5999999999999999999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHH
Q 002310 474 QRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGT 553 (937)
Q Consensus 474 ~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~ 553 (937)
|+.+++++.+++.++++++++++++|++.+ ..|..++.++++++++ +|||+|+ +++++++..+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~i~v~v~---~iP~~L~--~~v~i~l~~~~ 322 (997)
T TIGR01106 259 AIEIEHFIHIITGVAVFLGVSFFILSLILG-----------YTWLEAVIFLIGIIVA---NVPEGLL--ATVTVCLTLTA 322 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHhh---cCCccch--HHHHHHHHHHH
Confidence 999999999999988888887777765433 2456778888999999 9999998 99999999999
Q ss_pred HhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCC----CCC--CCHHHHHHHHHhc
Q 002310 554 SLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNP----IHP--LSETEILKFAAGV 627 (937)
Q Consensus 554 ~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~----~~~--~~~~~ll~~aa~~ 627 (937)
.+++++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+..+..... .+. ...+.++..++.+
T Consensus 323 ~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alc 402 (997)
T TIGR01106 323 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLC 402 (997)
T ss_pred HHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999876554432211100 010 1112455544443
Q ss_pred cc----------------CCCCChHHHHHHHHHhcCCccccc--cCCceEEec-----CCeeEEEE-c---C---eEEEe
Q 002310 628 ES----------------NTVHPIGKAIVEAAEFSNCQNVKV--ADGTFIEEP-----GSGTVAII-E---D---RKVSV 677 (937)
Q Consensus 628 e~----------------~s~hP~~~Ai~~~a~~~~~~~~~~--~~~~~~~~~-----g~g~~~~i-~---~---~~~~~ 677 (937)
.. ...+|.+.|+++++...+...... ......+.| .+...... + + ..+.|
T Consensus 403 n~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~K 482 (997)
T TIGR01106 403 NRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMK 482 (997)
T ss_pred CCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEe
Confidence 21 124789999999987543221111 011122222 22222221 1 1 23799
Q ss_pred ccHHHHHhcCCCC------cch-----h----hHHHHHhCCCeEEEEE------------------------ECCEEEEE
Q 002310 678 GTIDWLRSHGVDT------STF-----Q----EVEMEDLMNQSLVYVG------------------------VDNMLAGL 718 (937)
Q Consensus 678 G~~~~l~~~~~~~------~~~-----~----~~~~~~~~~~~~~~v~------------------------~~~~~lG~ 718 (937)
|+++.+.+.|... .+. + ..++...+|.+++.++ .|.+|+|+
T Consensus 483 GApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGl 562 (997)
T TIGR01106 483 GAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGL 562 (997)
T ss_pred CChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEE
Confidence 9999999988421 010 1 1223455677766554 35579999
Q ss_pred EEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------------------------
Q 002310 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------------- 766 (937)
Q Consensus 719 i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------------- 766 (937)
++++||+|+|++++|++|+++||+|+|+|||+..||.++|+++||.++
T Consensus 563 i~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~ 642 (997)
T TIGR01106 563 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS 642 (997)
T ss_pred EeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence 999999999999999999999999999999999999999999999311
Q ss_pred -------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CChHHHHhhcCE
Q 002310 767 -------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAASEVASV 826 (937)
Q Consensus 767 -------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~gt~~a~~aADi 826 (937)
.||||++|+||.++|+.||+.|++|+|+|||+||+|||++|||||||| +|+|+|+++||+
T Consensus 643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADi 722 (997)
T TIGR01106 643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 722 (997)
T ss_pred HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhce
Confidence 299999999999999999999999999999999999999999999999 899999999999
Q ss_pred EEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccc
Q 002310 827 VLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLK 906 (937)
Q Consensus 827 vL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~ 906 (937)
||++|+|+.|++++++||+++.|+++++.|.++.|+..+.+.+.. .+++ .-.|+.+..++.++-+...+.++.|.+.
T Consensus 723 vL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~--~~~~-~~~pl~~~qlL~inli~d~lp~~al~~e 799 (997)
T TIGR01106 723 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIF--IIAN-IPLPLGTITILCIDLGTDMVPAISLAYE 799 (997)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH--HHHc-CcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999766554322 2233 2357777778888888888888888663
Q ss_pred cccccccccCCCCCCc-ccccccc
Q 002310 907 FSSKQKASFQAPSSRV-NSNVDSH 929 (937)
Q Consensus 907 ~~~~~~~~~~~~~~~~-~~~~~~~ 929 (937)
+...+.+++||++. +..+.+.
T Consensus 800 --~~~~~~m~~~P~~~~~~~l~~~ 821 (997)
T TIGR01106 800 --KAESDIMKRQPRNPKTDKLVNE 821 (997)
T ss_pred --CCCcccccCCCcCCccccccCH
Confidence 45555788888764 4444443
No 21
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.3e-82 Score=794.53 Aligned_cols=583 Identities=20% Similarity=0.225 Sum_probs=460.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEE
Q 002310 326 FEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVV 405 (937)
Q Consensus 326 f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvl 405 (937)
|..++++++++++...+..++++|+++++++|+++.+.+++|+|+ |++++|+++||||||||.|++||+||||++|
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRd----g~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRN----GKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeC----CeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 345677888888899999999999999999999999999999987 6899999999999999999999999999999
Q ss_pred eec-ceeeeeccccCCCcccccCCC---------------CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhc-
Q 002310 406 RAG-RSTVDESSFTGEPLPVTKIPE---------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQS- 468 (937)
Q Consensus 406 l~G-~~~VDeS~LTGEs~pv~K~~g---------------~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~- 468 (937)
+++ ++.||||+|||||.|+.|.+. +.+|+||.+.+|.++++|++||.+|.+|||.+++.+.+.
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 997 589999999999999999742 358999999999999999999999999999999865431
Q ss_pred ----------------------------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccC
Q 002310 469 ----------------------------------REAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYG 514 (937)
Q Consensus 469 ----------------------------------~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~ 514 (937)
.+||+|+.+++++.++..+.+++++++|++..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~------------ 304 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD------------ 304 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------------
Confidence 2499999999999988777777776666543210
Q ss_pred CcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEE
Q 002310 515 GPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVT 594 (937)
Q Consensus 515 ~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~ 594 (937)
.+...+.+++++++. ++|.+|+ ..+.++++.+..+++++++++|+++++|+||++++||+|||||||+|+|+|+
T Consensus 305 -~~~~~~~~av~l~Va---~VPegLp--~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 -VDKEVAIYAICLAIS---IIPESLI--AVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred -hhHHHHHHHHHHHHH---HcccchH--HHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 013455667888888 9999999 9999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCC-c---------CCCCC-C---------------C----C---------C----CCCCC---HHHHHHHHHhcc
Q 002310 595 KVVTSGS-L---------TDPNS-K---------------Q----N---------P----IHPLS---ETEILKFAAGVE 628 (937)
Q Consensus 595 ~i~~~~~-~---------~~~~~-~---------------~----~---------~----~~~~~---~~~ll~~aa~~e 628 (937)
+++..+. . |+++. . . + . ..... ..+++..++.+.
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 9986531 1 11100 0 0 0 0 00000 123444333321
Q ss_pred c-------------CCCCChHHHHHHHHHhcCCccc------cc---------------------cCCceEEec---CCe
Q 002310 629 S-------------NTVHPIGKAIVEAAEFSNCQNV------KV---------------------ADGTFIEEP---GSG 665 (937)
Q Consensus 629 ~-------------~s~hP~~~Ai~~~a~~~~~~~~------~~---------------------~~~~~~~~~---g~g 665 (937)
. ...+|.+.|+++++...+.+.. .. ......+.| .+.
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 0 1258999999999987665310 00 001111222 222
Q ss_pred -eEEEEc---Ce---EEEeccHHHHHhcCCCCc--------ch---------hhHHHHHhCCCeEEEEEE----------
Q 002310 666 -TVAIIE---DR---KVSVGTIDWLRSHGVDTS--------TF---------QEVEMEDLMNQSLVYVGV---------- 711 (937)
Q Consensus 666 -~~~~i~---~~---~~~~G~~~~l~~~~~~~~--------~~---------~~~~~~~~~~~~~~~v~~---------- 711 (937)
+...+. +. .++||+++.+.+.|.... +. +..++++.+|.+++.+++
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 222221 22 378999999999885321 11 112345567777766552
Q ss_pred ---------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------
Q 002310 712 ---------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------- 766 (937)
Q Consensus 712 ---------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---------- 766 (937)
|.+|+|+++++||+|++++++|+.||++||+|+|+|||++.||.+||+++||.+.
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 5679999999999999999999999999999999999999999999999999532
Q ss_pred -------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC-CChHHH
Q 002310 767 -------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG-GGVGAA 820 (937)
Q Consensus 767 -------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg-~gt~~a 820 (937)
.||||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|+|
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~va 778 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVA 778 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHH
Confidence 389999999999999999999999999999999999999999999999 899999
Q ss_pred HhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhc-cccccchHHHHHHHhhhhHHHHHH
Q 002310 821 SEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLP-VTGTMLTPSIAGALMGLSSIGVMA 898 (937)
Q Consensus 821 ~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~~~~~-~~g~~l~P~~a~~~m~~ssl~v~~ 898 (937)
+++||++|++|+|+.|++++++||++++||++++.|.++.|+..+.+.+ +.++. +.|....|+.+..+.+..-+...+
T Consensus 779 k~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~ 858 (1053)
T TIGR01523 779 KDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCF 858 (1053)
T ss_pred HHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999996655443 22221 113223466666777777777778
Q ss_pred HHhhhccccccccccccCCCCCCccccccccccc
Q 002310 899 NSLLLRLKFSSKQKASFQAPSSRVNSNVDSHQLM 932 (937)
Q Consensus 899 nsl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (937)
.++.|.+ .++..+.+++||++.+.++.+..+.
T Consensus 859 palaL~~--e~~~~~~m~~~Pr~~~~~l~~~~~~ 890 (1053)
T TIGR01523 859 PAMGLGL--EKAAPDLMDRLPHDNEVGIFQKELI 890 (1053)
T ss_pred HHHhhcc--CCCChhHHhcCCCCCCccccCHHHH
Confidence 8877765 4566667999999988888886543
No 22
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.2e-80 Score=772.29 Aligned_cols=589 Identities=21% Similarity=0.232 Sum_probs=465.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEe
Q 002310 327 EEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVR 406 (937)
Q Consensus 327 ~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll 406 (937)
..++++++++++...+..++++|+++.+++|.++.|.+++|+|+ |++++|+++||+|||+|.|++||+|||||+|+
T Consensus 37 ~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd----g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll 112 (917)
T TIGR01116 37 VEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD----GRWSVIKAKDLVPGDIVELAVGDKVPADIRVL 112 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC----CEEEEEEHHHCCCCCEEEECCCCEeeccEEEE
Confidence 35667777788888889999999999999999999999999987 58999999999999999999999999999999
Q ss_pred ecc-eeeeeccccCCCcccccCCC-------------CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCCh
Q 002310 407 AGR-STVDESSFTGEPLPVTKIPE-------------SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAP 472 (937)
Q Consensus 407 ~G~-~~VDeS~LTGEs~pv~K~~g-------------~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~ 472 (937)
+|+ +.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|||.+++++++.+++|
T Consensus 113 ~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~ 192 (917)
T TIGR01116 113 SLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTP 192 (917)
T ss_pred EecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCC
Confidence 985 89999999999999999875 7799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHH
Q 002310 473 VQRLADQVSGHFTYGVIALSAATFVFWNLFGAHV-LPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYV 551 (937)
Q Consensus 473 l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~-~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~ 551 (937)
+|+.+++++.+++++++++++++|+++....... ....+. ..+...+..++++++. +|||+|+ ++++++++.
T Consensus 193 lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~l~v~---~iP~~Lp--~~vti~l~~ 265 (917)
T TIGR01116 193 LQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWI--QGAIYYFKIAVALAVA---AIPEGLP--AVITTCLAL 265 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhH--HHHHHHHHHHHhhhhh---ccccccH--HHHHHHHHH
Confidence 9999999999998888877777766553221100 000000 1223455567788888 9999999 999999999
Q ss_pred HHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcC-------------CCCCCC-CCC---CC
Q 002310 552 GTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLT-------------DPNSKQ-NPI---HP 614 (937)
Q Consensus 552 ~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~-------------~~~~~~-~~~---~~ 614 (937)
+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+ ++.... ... ..
T Consensus 266 ~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (917)
T TIGR01116 266 GTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAG 345 (917)
T ss_pred HHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccc
Confidence 9999999999999999999999999999999999999999999998764221 100000 000 00
Q ss_pred CC---HHHHHHHHHhccc-------------CCCCChHHHHHHHHHhcCCcccccc---------------C---CceEE
Q 002310 615 LS---ETEILKFAAGVES-------------NTVHPIGKAIVEAAEFSNCQNVKVA---------------D---GTFIE 660 (937)
Q Consensus 615 ~~---~~~ll~~aa~~e~-------------~s~hP~~~Ai~~~a~~~~~~~~~~~---------------~---~~~~~ 660 (937)
.. ..+++..++.+.. ...+|.+.|+++++++.+.+..... . ....+
T Consensus 346 ~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (917)
T TIGR01116 346 GQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLAT 425 (917)
T ss_pred cchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeee
Confidence 00 1223333322211 1258999999999887665422110 0 01111
Q ss_pred ec----CCeeEEEEc--C--eEEEeccHHHHHhcCCCCc-------ch-----h----hHHHHHh-CCCeEEEEEE----
Q 002310 661 EP----GSGTVAIIE--D--RKVSVGTIDWLRSHGVDTS-------TF-----Q----EVEMEDL-MNQSLVYVGV---- 711 (937)
Q Consensus 661 ~~----g~g~~~~i~--~--~~~~~G~~~~l~~~~~~~~-------~~-----~----~~~~~~~-~~~~~~~v~~---- 711 (937)
.| .+.+...++ + ..+.||+++.+.+.|.... +. + ..++.+. +|.+++.+++
T Consensus 426 ~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~ 505 (917)
T TIGR01116 426 LEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIP 505 (917)
T ss_pred cccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECC
Confidence 12 122233332 2 3488999999999885321 11 0 1223455 7777776652
Q ss_pred -------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-------
Q 002310 712 -------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------- 765 (937)
Q Consensus 712 -------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~------- 765 (937)
|.+|+|+++++||+|++++++|+.||++||+++|+|||+++||.++|+++||..
T Consensus 506 ~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~ 585 (917)
T TIGR01116 506 DPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTF 585 (917)
T ss_pred ccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccc
Confidence 457999999999999999999999999999999999999999999999999954
Q ss_pred ----------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhh
Q 002310 766 ----------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823 (937)
Q Consensus 766 ----------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~a 823 (937)
..||||++|+||.++|+.||+.|++|+|+|||+||+|||++|||||+||+|+++++++
T Consensus 586 ~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~a 665 (917)
T TIGR01116 586 KSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEA 665 (917)
T ss_pred eeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHh
Confidence 1599999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhh
Q 002310 824 ASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLL 903 (937)
Q Consensus 824 ADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l 903 (937)
||+++.+|+|+.|++++++||++++|+++++.|.++.|+..+.+.+... ++| .-.|+-+..+..++.+...+.++.|
T Consensus 666 AD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~--~~~-~~~pl~~~qll~inli~d~lp~~~l 742 (917)
T TIGR01116 666 SDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTA--ALG-IPEGLIPVQLLWVNLVTDGLPATAL 742 (917)
T ss_pred cCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH--HHc-CCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997655443221 123 2256666677777778888888887
Q ss_pred ccccccccccccCCCCCCcccccccccc
Q 002310 904 RLKFSSKQKASFQAPSSRVNSNVDSHQL 931 (937)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (937)
.+..+ ..+.+++||.+.+..+++..+
T Consensus 743 ~~~~~--~~~~m~~pP~~~~~~l~~~~~ 768 (917)
T TIGR01116 743 GFNPP--DKDIMWKPPRRPDEPLITGWL 768 (917)
T ss_pred hcCCc--chhHhcCCCCCCCCCcccHHH
Confidence 65533 366688999887777766543
No 23
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=3.5e-80 Score=729.29 Aligned_cols=477 Identities=32% Similarity=0.436 Sum_probs=431.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhc--CCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecce
Q 002310 333 IAFVLLGKNLEQRAKIKATSDMTGLLG--ILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS 410 (937)
Q Consensus 333 l~~~llg~~le~~~~~k~~~~l~~l~~--~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~ 410 (937)
+++++++.+++.++++++.+.+++|.+ ..|++++++|+ | +++|++++|+|||+|.+++||+|||||+|++|++
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~----g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~ 77 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRN----G-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC 77 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEEC----C-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE
Confidence 456788999999999999999999998 89999999985 5 7899999999999999999999999999999999
Q ss_pred eeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHH-HHHHHHHH
Q 002310 411 TVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVS-GHFTYGVI 489 (937)
Q Consensus 411 ~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~-~~~~~~vl 489 (937)
.||||+|||||.|+.|.+|+.+++|+.+.+|+++++|+++|.+|..+++...+++++..++++++..+++. .+|+++++
T Consensus 78 ~vdes~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~ 157 (499)
T TIGR01494 78 FVDESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVL 157 (499)
T ss_pred EEEcccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999 89999999
Q ss_pred HHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHH
Q 002310 490 ALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNIL 569 (937)
Q Consensus 490 ~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~l 569 (937)
+++++++++|++.... ..+|..++.++++++++ +|||+|+ +++|+++..+..+++++|+++|+++++
T Consensus 158 ~la~~~~~~~~~~~~~--------~~~~~~~~~~~~~vl~~---~~P~aL~--~~~~~~~~~~~~~~~~~gilvk~~~~l 224 (499)
T TIGR01494 158 LIALAVFLFWAIGLWD--------PNSIFKIFLRALILLVI---AIPIALP--LAVTIALAVGDARLAKKGIVVRSLNAL 224 (499)
T ss_pred HHHHHHHHHHHHHHcc--------cccHHHHHHHHHHHHHH---hcCCcHH--HHHHHHHHHHHHHHHHCCcEEechhhh
Confidence 9999888888654321 01357789999999999 9999999 999999999999999999999999999
Q ss_pred hhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCc
Q 002310 570 EKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQ 649 (937)
Q Consensus 570 E~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~ 649 (937)
|+|+++|++|||||||||+|+|++.++++.+ . |..+.||+++|++++++.....
T Consensus 225 E~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~-------------~-------------~~~s~hp~~~ai~~~~~~~~~~ 278 (499)
T TIGR01494 225 EELGKVDYICSDKTGTLTKNEMSFKKVSVLG-------------G-------------EYLSGHPDERALVKSAKWKILN 278 (499)
T ss_pred hhccCCcEEEeeCCCccccCceEEEEEEecC-------------C-------------CcCCCChHHHHHHHHhhhcCcc
Confidence 9999999999999999999999999998641 1 4678999999999998754321
Q ss_pred cccccCCceEEecCCeeEEEEcC--eEEEeccHHHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCCh
Q 002310 650 NVKVADGTFIEEPGSGTVAIIED--RKVSVGTIDWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRD 727 (937)
Q Consensus 650 ~~~~~~~~~~~~~g~g~~~~i~~--~~~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~ 727 (937)
..+|...+ +|+.+.+++ +.+.+|+++++.+.|... .+..+.....+.+.++++++++++|++.++|++|+
T Consensus 279 -----~~~f~~~~-~~~~~~~~~~~~~~~~G~~~~i~~~~~~~--~~~~~~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~ 350 (499)
T TIGR01494 279 -----VFEFSSVR-KRMSVIVRGPDGTYVKGAPEFVLSRVKDL--EEKVKELAQSGLRVLAVASKETLLGLLGLEDPLRD 350 (499)
T ss_pred -----eeccCCCC-ceEEEEEecCCcEEEeCCHHHHHHhhHHH--HHHHHHHHhCCCEEEEEEECCeEEEEEEecCCCch
Confidence 23455555 677777764 579999999998876421 11222345578899999999999999999999999
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhC
Q 002310 728 DAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 728 ~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~A 807 (937)
+++++|+.|+++|++++|+|||++.+|..+|+++|| +++++|+||.++|+.+|++|+.|+|+|||+||+|||++|
T Consensus 351 ~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-----~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~A 425 (499)
T TIGR01494 351 DAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-----FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKA 425 (499)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhC
Confidence 999999999999999999999999999999999997 799999999999999999999999999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGV 871 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~ 871 (937)
||||+|+ |+++||++|+++++..++.++++||+++++++||+.|+++||++.+++++++
T Consensus 426 dvgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 426 DVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred CCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999997 7899999999999999999999999999999999999999999999998753
No 24
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=8e-78 Score=758.64 Aligned_cols=565 Identities=18% Similarity=0.202 Sum_probs=435.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEc--CCCEEeee
Q 002310 325 FFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVL--PGDRIPAD 402 (937)
Q Consensus 325 ~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~--~Ge~IPaD 402 (937)
||..++++++++++...+..++++|+.+.++++.. .|..++|+|+ |++++|+++||+|||+|.|+ +|++||||
T Consensus 192 ~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rd----g~~~~I~s~eLvpGDiv~l~~~~g~~iPaD 266 (1054)
T TIGR01657 192 YYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRN----GKWVTIASDELVPGDIVSIPRPEEKTMPCD 266 (1054)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEEC----CEEEEEEcccCCCCCEEEEecCCCCEecce
Confidence 55567778888888999999999999999888755 5789999987 58999999999999999999 99999999
Q ss_pred EEEeecceeeeeccccCCCcccccCCC------------------Cccccceeeec-------ceEEEEEEecCCccHHH
Q 002310 403 GVVRAGRSTVDESSFTGEPLPVTKIPE------------------SEVAAGSINLN-------GTLTVEVRRPGGETAMG 457 (937)
Q Consensus 403 gvll~G~~~VDeS~LTGEs~pv~K~~g------------------~~v~aGt~~~~-------G~~~~~V~~~G~~T~~~ 457 (937)
|+|++|++.||||+|||||.|+.|.+. +.+|+||.+.+ |.+.++|++||.+|..|
T Consensus 267 ~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G 346 (1054)
T TIGR01657 267 SVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKG 346 (1054)
T ss_pred EEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccch
Confidence 999999999999999999999999762 24999999984 78999999999999999
Q ss_pred HHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhccccccc
Q 002310 458 DIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCC 537 (937)
Q Consensus 458 ~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pc 537 (937)
++++.+..++..++++++.+.++..++. +++++.++++++.+. ..+.++...+.+++.++++ ++|+
T Consensus 347 ~i~~~i~~~~~~~~~~~~~~~~~~~~l~----~~a~i~~i~~~~~~~-------~~~~~~~~~~l~~l~iiv~---~vP~ 412 (1054)
T TIGR01657 347 QLVRSILYPKPRVFKFYKDSFKFILFLA----VLALIGFIYTIIELI-------KDGRPLGKIILRSLDIITI---VVPP 412 (1054)
T ss_pred HHHHHhhCCCCCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHH-------HcCCcHHHHHHHHHHHHHh---hcCc
Confidence 9999999888888999888777654433 333333332222111 1234677888899999999 9999
Q ss_pred ccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCH
Q 002310 538 LSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSE 617 (937)
Q Consensus 538 al~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 617 (937)
+|+ +++++++..++.+++++|+++|++.++|.+|++|++|||||||||+|+|.|.+++..+.................
T Consensus 413 ~LP--~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~ 490 (1054)
T TIGR01657 413 ALP--AELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKP 490 (1054)
T ss_pred hHH--HHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCc
Confidence 999 999999999999999999999999999999999999999999999999999999875432111000000000111
Q ss_pred HHHHHHHHhcc-------cCCCCChHHHHHHHHHhcCCc--c--cccc----------CCc------eEEecCC-e--eE
Q 002310 618 TEILKFAAGVE-------SNTVHPIGKAIVEAAEFSNCQ--N--VKVA----------DGT------FIEEPGS-G--TV 667 (937)
Q Consensus 618 ~~ll~~aa~~e-------~~s~hP~~~Ai~~~a~~~~~~--~--~~~~----------~~~------~~~~~g~-g--~~ 667 (937)
..++...+.+. ....+|++.|+++++...-.. . .... ... +...+.+ . +.
T Consensus 491 ~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvv 570 (1054)
T TIGR01657 491 SITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVI 570 (1054)
T ss_pred hHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEE
Confidence 22222222221 234799999999986421000 0 0000 011 1111111 1 22
Q ss_pred EEEc--Ce--EEEeccHHHHHhcCCCCc---c-hhhHHHHHhCCCeEEEEEE---------------------CCEEEEE
Q 002310 668 AIIE--DR--KVSVGTIDWLRSHGVDTS---T-FQEVEMEDLMNQSLVYVGV---------------------DNMLAGL 718 (937)
Q Consensus 668 ~~i~--~~--~~~~G~~~~l~~~~~~~~---~-~~~~~~~~~~~~~~~~v~~---------------------~~~~lG~ 718 (937)
.... ++ .+.||+||.+.+.|.... . .+..+.+..+|.+++.+++ |.+|+|+
T Consensus 571 v~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGl 650 (1054)
T TIGR01657 571 VSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGF 650 (1054)
T ss_pred EEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEE
Confidence 2222 22 589999999999987422 1 1234456778888888763 4689999
Q ss_pred EEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------------------------
Q 002310 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-------------------------------- 766 (937)
Q Consensus 719 i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-------------------------------- 766 (937)
++|+||+||+++++|+.||++||+|+|+||||+.||.+||+++||.+.
T Consensus 651 i~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1054)
T TIGR01657 651 IVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAS 730 (1054)
T ss_pred EEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccc
Confidence 999999999999999999999999999999999999999999999210
Q ss_pred -------------------------------------------------eeEeccChhhHHHHHHHHhcCCCEEEEEcCC
Q 002310 767 -------------------------------------------------KVLSGVKPNEKKRFINELQNDENVVAMVGDG 797 (937)
Q Consensus 767 -------------------------------------------------~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG 797 (937)
.||||++|+||.++|+.||+.|++|+|||||
T Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG 810 (1054)
T TIGR01657 731 TQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDG 810 (1054)
T ss_pred ccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4999999999999999999999999999999
Q ss_pred cccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 002310 798 INDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTG 877 (937)
Q Consensus 798 ~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g 877 (937)
+||+||||+||||||||++ |++ .+||+++.+++|+.|+++|++||+++.++++.+.|.+.|+++..... ..++ ..|
T Consensus 811 ~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~-~~l~-~~~ 886 (1054)
T TIGR01657 811 ANDCGALKQADVGISLSEA-EAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSV-SILY-LIG 886 (1054)
T ss_pred hHHHHHHHhcCcceeeccc-cce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-Hcc
Confidence 9999999999999999854 444 89999999999999999999999999999999999999998764332 2222 234
Q ss_pred ccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCC
Q 002310 878 TMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPS 919 (937)
Q Consensus 878 ~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~ 919 (937)
..++| ..++....++....++.|.+.+|.+. .+++||
T Consensus 887 ~~l~~---~Q~l~i~li~~~~~~l~l~~~~p~~~--l~~~~P 923 (1054)
T TIGR01657 887 SNLGD---GQFLTIDLLLIFPVALLMSRNKPLKK--LSKERP 923 (1054)
T ss_pred CcCcc---HHHHHHHHHHHHHHHHHHHcCCchhh--cCCCCC
Confidence 33444 45667777788888888866644443 355555
No 25
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1e-69 Score=687.04 Aligned_cols=619 Identities=15% Similarity=0.111 Sum_probs=450.6
Q ss_pred hccHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 002310 276 GPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355 (937)
Q Consensus 276 ~~g~~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~ 355 (937)
|..|.|++..+..++++..|+.+|+...+.....++ ..++..++.+.++++++..+++++|++.++++++.++
T Consensus 11 Y~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s-------~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n 83 (1057)
T TIGR01652 11 YTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS-------PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVN 83 (1057)
T ss_pred CcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC-------CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence 556788888888899999999998754433221111 1234456667777777889999999999999987654
Q ss_pred HhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee-----cceeeeeccccCCCcccccCCC-
Q 002310 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIPE- 429 (937)
Q Consensus 356 ~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~-----G~~~VDeS~LTGEs~pv~K~~g- 429 (937)
++.++|+|++ |++++++++||+|||+|.|++||+||||++|++ |.++||||.|||||.|+.|.+.
T Consensus 84 ------~~~~~v~~~~---~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~ 154 (1057)
T TIGR01652 84 ------NRLTEVLEGH---GQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALE 154 (1057)
T ss_pred ------CcEEEEECCC---CcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecch
Confidence 4788998763 478999999999999999999999999999996 7799999999999999988642
Q ss_pred -----------------------------------------------Cccccceeeec-ceEEEEEEecCCccHHHHHHH
Q 002310 430 -----------------------------------------------SEVAAGSINLN-GTLTVEVRRPGGETAMGDIVR 461 (937)
Q Consensus 430 -----------------------------------------------~~v~aGt~~~~-G~~~~~V~~~G~~T~~~~i~~ 461 (937)
+.+++||.+.+ |.+.+.|++||.+|.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~--- 231 (1057)
T TIGR01652 155 ETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR--- 231 (1057)
T ss_pred hhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh---
Confidence 34678888888 899999999999997755
Q ss_pred HHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhcc------C---CcHHHHHHHHHHHHhhcc
Q 002310 462 LVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQY------G---GPVSLALQLSCSVLRKET 532 (937)
Q Consensus 462 ~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~------~---~~~~~~l~~ai~vlvv~~ 532 (937)
.....+.+++++++.++++..++..+.++++++.+++..++........++. . ..+...+..++.++..
T Consensus 232 n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~-- 309 (1057)
T TIGR01652 232 NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSS-- 309 (1057)
T ss_pred cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhh--
Confidence 3445567789999999999888777777777666665333221000000100 0 0122234445555555
Q ss_pred cccccccchhhHHHHHHHHHH------Hhhhc----CcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCc
Q 002310 533 SICCCLSMCPWLSHAYSYVGT------SLGAT----RGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSL 602 (937)
Q Consensus 533 ~~~Pcal~~pla~p~a~~~~~------~~~a~----~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~ 602 (937)
.+|.+|. ..+.++..... .++.+ +++++|+.+.+|+||+|++||+|||||||+|+|++++++..+..
T Consensus 310 -~IPisL~--v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~ 386 (1057)
T TIGR01652 310 -LIPISLY--VSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVS 386 (1057)
T ss_pred -hcceeee--ehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEE
Confidence 8999998 88888877776 56665 35999999999999999999999999999999999999987665
Q ss_pred CCCCCCC--------C------------C-----------------CCCCC--HHHHHHHHH-hc----c---c------
Q 002310 603 TDPNSKQ--------N------------P-----------------IHPLS--ETEILKFAA-GV----E---S------ 629 (937)
Q Consensus 603 ~~~~~~~--------~------------~-----------------~~~~~--~~~ll~~aa-~~----e---~------ 629 (937)
|+..... . . ..... ..+++..++ +. + .
T Consensus 387 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~ 466 (1057)
T TIGR01652 387 YGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEIT 466 (1057)
T ss_pred ecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceE
Confidence 5422100 0 0 00000 012222111 11 1 1
Q ss_pred -CCCCChHHHHHHHHHhcCCccccccCC-------------ceE---Eec----CCeeEEEEc--C---eEEEeccHHHH
Q 002310 630 -NTVHPIGKAIVEAAEFSNCQNVKVADG-------------TFI---EEP----GSGTVAIIE--D---RKVSVGTIDWL 683 (937)
Q Consensus 630 -~s~hP~~~Ai~~~a~~~~~~~~~~~~~-------------~~~---~~~----g~g~~~~i~--~---~~~~~G~~~~l 683 (937)
.+.+|.+.|++++++..|+.....+.. .+. ..| .+.+...++ + ..++||+++.+
T Consensus 467 y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~i 546 (1057)
T TIGR01652 467 YQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVI 546 (1057)
T ss_pred EEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHH
Confidence 146899999999999887754322211 111 011 122333332 2 24799999999
Q ss_pred HhcCCCCc--c----hhhHHHHHhCCCeEEEEE--------------------------------------ECCEEEEEE
Q 002310 684 RSHGVDTS--T----FQEVEMEDLMNQSLVYVG--------------------------------------VDNMLAGLI 719 (937)
Q Consensus 684 ~~~~~~~~--~----~~~~~~~~~~~~~~~~v~--------------------------------------~~~~~lG~i 719 (937)
.+.|.... . .+..++...+|.+++.++ .|.+|+|++
T Consensus 547 l~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~ 626 (1057)
T TIGR01652 547 FKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGAT 626 (1057)
T ss_pred HHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEE
Confidence 98775321 1 112334556677776654 367899999
Q ss_pred EecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---------------------------------
Q 002310 720 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------------------------- 766 (937)
Q Consensus 720 ~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--------------------------------- 766 (937)
+++|+||+|++++|+.||++||+|||+|||+.+||.+||++|||.+.
T Consensus 627 gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~ 706 (1057)
T TIGR01652 627 AIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEF 706 (1057)
T ss_pred EEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999997210
Q ss_pred ---------------------------------------eeEeccChhhHHHHHHHHhcC-CCEEEEEcCCcccHHHHHh
Q 002310 767 ---------------------------------------KVLSGVKPNEKKRFINELQND-ENVVAMVGDGINDAAALAS 806 (937)
Q Consensus 767 ---------------------------------------~v~ar~~Pe~K~~iV~~Lq~~-G~~VamvGDG~NDa~AL~~ 806 (937)
.||||++|+||.++|+.+|+. |++|+|+|||+||+|||++
T Consensus 707 ~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~ 786 (1057)
T TIGR01652 707 NNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQE 786 (1057)
T ss_pred hhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhh
Confidence 289999999999999999998 9999999999999999999
Q ss_pred CCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhc-cccccchH
Q 002310 807 SHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVAL-ELSRLTMKTVKQNLWWAFGYNIVGIPIAA-GVLLP-VTGTMLTP 882 (937)
Q Consensus 807 AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i-~~~R~~~~~i~~nl~~a~~~Nii~i~la~-~~~~~-~~g~~l~P 882 (937)
|||||++. .....|+++||+++.+ |+.|.+++ .+||+.++++++.+.|.++.|++.+.+-+ +.++. +.| .+|
T Consensus 787 AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~--~~~ 862 (1057)
T TIGR01652 787 ADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSG--QTL 862 (1057)
T ss_pred cCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc--HHH
Confidence 99999984 2222578899999974 99999998 77999999999999999999986554432 22221 122 345
Q ss_pred HHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCc
Q 002310 883 SIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRV 922 (937)
Q Consensus 883 ~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~ 922 (937)
+-...++.+..+...+.++.+.....+..++.++++|..+
T Consensus 863 ~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly 902 (1057)
T TIGR01652 863 YEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLY 902 (1057)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHH
Confidence 5555666778888888887775544444455677777644
No 26
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-72 Score=638.65 Aligned_cols=610 Identities=21% Similarity=0.254 Sum_probs=451.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCC
Q 002310 296 MNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKD 375 (937)
Q Consensus 296 md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g 375 (937)
..+|+-+++..+|+...+..-..+...+...-.++++...+.+.-....++..|..+.++.+.++.|..++|+|+ |
T Consensus 96 ~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRd----g 171 (1019)
T KOG0203|consen 96 FSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRD----G 171 (1019)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeec----c
Confidence 456777777777664332222111111112222344444444555566777888889999999999999999998 6
Q ss_pred eEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc-eeeeeccccCCCcccccCCC----------CccccceeeecceEE
Q 002310 376 SIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR-STVDESSFTGEPLPVTKIPE----------SEVAAGSINLNGTLT 444 (937)
Q Consensus 376 ~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~-~~VDeS~LTGEs~pv~K~~g----------~~v~aGt~~~~G~~~ 444 (937)
+.+.+..+||++||+|.++-||+||||.+++++. ++||+|+|||||+|.++.+. +.-|.+|.+++|+.+
T Consensus 172 ~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~ 251 (1019)
T KOG0203|consen 172 EKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGR 251 (1019)
T ss_pred eeEEechhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEE
Confidence 8899999999999999999999999999999986 79999999999999998763 346889999999999
Q ss_pred EEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHH
Q 002310 445 VEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLS 524 (937)
Q Consensus 445 ~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~a 524 (937)
+.|.+||.+|.+|+|..+-..-+..++|+++.++++..+.+...+.+.+..|++.... |..|..++.+.
T Consensus 252 givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~-----------gy~~l~avv~~ 320 (1019)
T KOG0203|consen 252 GIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL-----------GYEWLRAVVFL 320 (1019)
T ss_pred EEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-----------cchhHHHhhhh
Confidence 9999999999999999998888889999999999988877766666666555443333 33567777778
Q ss_pred HHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCC
Q 002310 525 CSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTD 604 (937)
Q Consensus 525 i~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~ 604 (937)
+.+++. .+|.+|. ..+...+.....+++++++++|+.++.|+||...+||+|||||||+|+|.|.++|..+....
T Consensus 321 i~iivA---nvPeGL~--~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~ 395 (1019)
T KOG0203|consen 321 IGIIVA---NVPEGLL--ATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHE 395 (1019)
T ss_pred heeEEe---cCcCCcc--ceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceee
Confidence 888888 9999998 88888889999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCCCCC------CCCCHHHHHHHHHhccc----------------CCCCChHHHHHHHHHhcCCc--cc-----cccC
Q 002310 605 PNSKQNPI------HPLSETEILKFAAGVES----------------NTVHPIGKAIVEAAEFSNCQ--NV-----KVAD 655 (937)
Q Consensus 605 ~~~~~~~~------~~~~~~~ll~~aa~~e~----------------~s~hP~~~Ai~~~a~~~~~~--~~-----~~~~ 655 (937)
.+...+.. ....-.++.+.+..+.. -..++.+.|++++++..-.. .. ++.+
T Consensus 396 ~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~e 475 (1019)
T KOG0203|consen 396 ADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAE 475 (1019)
T ss_pred eechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhc
Confidence 33211110 11122334443332211 12467788998887642111 00 1111
Q ss_pred CceEEecCCeeEEEE-------cCeEEEeccHHHHHhcCCCCc------chhhHH---------HHHhCC----------
Q 002310 656 GTFIEEPGSGTVAII-------EDRKVSVGTIDWLRSHGVDTS------TFQEVE---------MEDLMN---------- 703 (937)
Q Consensus 656 ~~~~~~~g~g~~~~i-------~~~~~~~G~~~~l~~~~~~~~------~~~~~~---------~~~~~~---------- 703 (937)
..|......-+.... +.-.+.||+++.+.+.|.... +..+.. .....|
T Consensus 476 ipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~ 555 (1019)
T KOG0203|consen 476 IPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLE 555 (1019)
T ss_pred CCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHh
Confidence 111111111111111 112378899999999886321 111100 000001
Q ss_pred -------CeEEEE-------EECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----
Q 002310 704 -------QSLVYV-------GVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---- 765 (937)
Q Consensus 704 -------~~~~~v-------~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---- 765 (937)
.+..+- -.++.|+|++++-||+|..+++++..||.+||||+|+|||++.||+++|+++||..
T Consensus 556 l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~e 635 (1019)
T KOG0203|consen 556 LPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSE 635 (1019)
T ss_pred cchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCch
Confidence 111111 12568999999999999999999999999999999999999999999999999721
Q ss_pred -----------------------------------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCc
Q 002310 766 -----------------------------------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGI 798 (937)
Q Consensus 766 -----------------------------------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~ 798 (937)
+.||||.+|+||+.||+.+|+.|.+|+++|||+
T Consensus 636 t~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGV 715 (1019)
T KOG0203|consen 636 TVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGV 715 (1019)
T ss_pred hhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCc
Confidence 169999999999999999999999999999999
Q ss_pred ccHHHHHhCCeeEEeC-CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 002310 799 NDAAALASSHIGVAMG-GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTG 877 (937)
Q Consensus 799 NDa~AL~~AdVGIamg-~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g 877 (937)
||+||||+|||||||| +|+|++|++||+||+||||++|+..+++||.+|+|+||.|.|.++.|+--|.--+..+ ++|
T Consensus 716 NDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi--~~g 793 (1019)
T KOG0203|consen 716 NDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI--LFG 793 (1019)
T ss_pred CCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH--HhC
Confidence 9999999999999999 9999999999999999999999999999999999999999999999985443222111 123
Q ss_pred cc--chHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCC-ccccccccccc
Q 002310 878 TM--LTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSR-VNSNVDSHQLM 932 (937)
Q Consensus 878 ~~--l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 932 (937)
+. ++++ ..+...+- .-+..|+.|. +...+.++++++|++ ++-...||+|.
T Consensus 794 iPLplgti-tIL~IDLg--TDmvPAiSLA--YE~aEsDIM~r~PR~p~~D~LVN~rLi 846 (1019)
T KOG0203|consen 794 IPLPLGTV-TILCIDLG--TDIVPAISLA--YEKAESDIMLRPPRNPKDDKLVNKRLI 846 (1019)
T ss_pred CCcccchh-hhhhhHhh--cccchhhhHh--ccCchhhHHhcCCCCCcccccccchhH
Confidence 22 2332 22222221 2334455554 456677789999998 88888898875
No 27
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-65 Score=550.55 Aligned_cols=530 Identities=26% Similarity=0.346 Sum_probs=408.0
Q ss_pred HHHHHHHHHHH----cCCCCchhHHHHHHHHHHHHHHHHHHhcc-cCcchhhhhHHHHH-HHHHHHHHHHHHHHHHhhHH
Q 002310 280 QLILDGVKSLF----KGAPNMNTLVGLGAVSSFTVSSLAALVPK-LGWKAFFEEPIMLI-AFVLLGKNLEQRAKIKATSD 353 (937)
Q Consensus 280 ~~~~~a~~~l~----~~~~~md~Li~l~~~~a~~~s~~~~~~~~-~~~~~~f~~~~~il-~~~llg~~le~~~~~k~~~~ 353 (937)
+-++.+|+.|. -++|-| +++-++++.+.++..+.-++.. .....|+....+++ +.+++..+-|..++.|....
T Consensus 15 ~A~~~af~KL~P~~~~kNPVM-Fvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAq 93 (681)
T COG2216 15 QALKDAFKKLNPRVLVKNPVM-FVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQ 93 (681)
T ss_pred HHHHHHHHhcChHHhhhCCeE-EeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 33444444442 133434 4445555555544444333322 12233443333333 33567778888887766666
Q ss_pred HHHhhcCCC-ceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecceeeeeccccCCCcccccCCC---
Q 002310 354 MTGLLGILP-SKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKIPE--- 429 (937)
Q Consensus 354 l~~l~~~~p-~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~~VDeS~LTGEs~pv~K~~g--- 429 (937)
...|++... ..+++++++ |+++.|++.+|+.||+|+|+.||.||+||.|++|.++||||.+||||-||-|+.|
T Consensus 94 AdsLr~~~~~~~A~~l~~~---g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~asVdESAITGESaPViresGgD~ 170 (681)
T COG2216 94 ADSLRKTKTETIARLLRAD---GSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAITGESAPVIRESGGDF 170 (681)
T ss_pred HHHHHHHHHHHHHHHhcCC---CCeeeccccccccCCEEEEecCCCccCCCeEEeeeeecchhhccCCCcceeeccCCCc
Confidence 566655433 345666554 6899999999999999999999999999999999999999999999999999998
Q ss_pred CccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 002310 430 SEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPT 509 (937)
Q Consensus 430 ~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~ 509 (937)
+.|-.||.+++..++++++....+|++.|++.+++.++.+|+|-+-.++-+..-++.+.++ +.++. ++.
T Consensus 171 ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~-~~~Tl----------~p~ 239 (681)
T COG2216 171 SSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLL-AVATL----------YPF 239 (681)
T ss_pred ccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHH-HHHhh----------hhH
Confidence 7799999999999999999999999999999999999999999766554433222222111 11111 111
Q ss_pred hhcc-CCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCC
Q 002310 510 AIQY-GGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTI 588 (937)
Q Consensus 510 ~~~~-~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~ 588 (937)
..+. +.+. .+...+++++. .+|...+ -..+.-=.+++.+..+.+++.+++.+.|..|.+|+++.|||||+|.
T Consensus 240 a~y~~g~~~--~i~~LiALlV~---LIPTTIG--gLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~ 312 (681)
T COG2216 240 AIYSGGGAA--SVTVLVALLVC---LIPTTIG--GLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITL 312 (681)
T ss_pred HHHcCCCCc--CHHHHHHHHHH---HhcccHH--HHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceee
Confidence 1111 2222 23345667777 7787777 4455555678999999999999999999999999999999999999
Q ss_pred CccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCccccccC---CceEEec---
Q 002310 589 GRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVAD---GTFIEEP--- 662 (937)
Q Consensus 589 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~---~~~~~~~--- 662 (937)
|+-.-.++++. ++.+++++...+....-.-+.|..+.|++.+++.+........ .+|....
T Consensus 313 GnR~A~~f~p~-------------~gv~~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~T 379 (681)
T COG2216 313 GNRQASEFIPV-------------PGVSEEELADAAQLASLADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQT 379 (681)
T ss_pred cchhhhheecC-------------CCCCHHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCCcccccccceeeecceec
Confidence 99999988876 6778888888888777788899999999999988755322221 1222211
Q ss_pred -CCeeEEEEcCeEEEeccHHHHHhcC----CCCc-c-hhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHH
Q 002310 663 -GSGTVAIIEDRKVSVGTIDWLRSHG----VDTS-T-FQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNS 735 (937)
Q Consensus 663 -g~g~~~~i~~~~~~~G~~~~l~~~~----~~~~-~-~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~ 735 (937)
.+|+... +++++.||+.+.++++- .... . ....++-+..|.+.+.+..|++++|++.+.|-+||+.+|-..+
T Consensus 380 RmSGvd~~-~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~e 458 (681)
T COG2216 380 RMSGVDLP-GGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAE 458 (681)
T ss_pred ccccccCC-CCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHH
Confidence 1222211 23789999998876542 2121 1 2223445677899999999999999999999999999999999
Q ss_pred HHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCC
Q 002310 736 LSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGG 815 (937)
Q Consensus 736 L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~ 815 (937)
||++|||.+|+||||+.||.+||++.|++ ++.|+++||||.++|+.-|.+|+.|+|+|||.||+|||++||||+||.+
T Consensus 459 lR~MgIkTvM~TGDN~~TAa~IA~EAGVD--dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNs 536 (681)
T COG2216 459 LRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS 536 (681)
T ss_pred HHhcCCeEEEEeCCCHHHHHHHHHHhCch--hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhcc
Confidence 99999999999999999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhhcCEEEeCCChhHHHHHHHHHHHHH
Q 002310 816 GVGAASEVASVVLMGNRLSQLLVALELSRLTM 847 (937)
Q Consensus 816 gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~ 847 (937)
|+++|||++..|=+|.|..++.+.+++|++..
T Consensus 537 GTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 537 GTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred ccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 99999999999999999999999999999864
No 28
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-64 Score=578.94 Aligned_cols=570 Identities=18% Similarity=0.227 Sum_probs=417.7
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcC-CCEEee
Q 002310 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLP-GDRIPA 401 (937)
Q Consensus 323 ~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~-Ge~IPa 401 (937)
+.|+..++.++++.+.+..+..+..++.+..++++... +..++|+|+ |.+++|.++||+||||+.+.+ +-..||
T Consensus 211 d~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~----g~~~ti~S~eLVPGDil~i~~~~~~~Pc 285 (1140)
T KOG0208|consen 211 DSYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRD----GFWETVDSSELVPGDILYIPPPGKIMPC 285 (1140)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEEC----CEEEEEeccccccccEEEECCCCeEeec
Confidence 45666667777777777788888888888888877654 467888887 589999999999999999998 999999
Q ss_pred eEEEeecceeeeeccccCCCcccccCCC-------------------Cccccceeeec------ceEEEEEEecCCccHH
Q 002310 402 DGVVRAGRSTVDESSFTGEPLPVTKIPE-------------------SEVAAGSINLN------GTLTVEVRRPGGETAM 456 (937)
Q Consensus 402 Dgvll~G~~~VDeS~LTGEs~pv~K~~g-------------------~~v~aGt~~~~------G~~~~~V~~~G~~T~~ 456 (937)
|++|++|+|.||||+|||||.|+.|.+- +.+|.||.+++ +.+.+.|++||.+|..
T Consensus 286 Da~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~K 365 (1140)
T KOG0208|consen 286 DALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTK 365 (1140)
T ss_pred ceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccc
Confidence 9999999999999999999999999874 24789998874 6899999999999999
Q ss_pred HHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccc
Q 002310 457 GDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICC 536 (937)
Q Consensus 457 ~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~P 536 (937)
|++++.+..++.....+.+...++... +.+++++.|++..+. ....|.++...+.+++-++.+ .+|
T Consensus 366 GqLVRsilyPkP~~fkfyrds~~fi~~----l~~ia~~gfiy~~i~-------l~~~g~~~~~iiirsLDliTi---~VP 431 (1140)
T KOG0208|consen 366 GQLVRSILYPKPVNFKFYRDSFKFILF----LVIIALIGFIYTAIV-------LNLLGVPLKTIIIRSLDLITI---VVP 431 (1140)
T ss_pred cHHHHhhcCCCCcccHHHHHHHHHHHH----HHHHHHHHHHHHhHh-------HHHcCCCHHHHhhhhhcEEEE---ecC
Confidence 999999999887766666665554332 333333333332211 122456778889999999999 999
Q ss_pred cccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCC-------
Q 002310 537 CLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQ------- 609 (937)
Q Consensus 537 cal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~------- 609 (937)
.||+ -+..+....+.+|+.|+||.+-+++.+...|++|++|||||||||++.+.+..+.+.....+.....
T Consensus 432 PALP--AaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~ 509 (1140)
T KOG0208|consen 432 PALP--AALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDS 509 (1140)
T ss_pred CCch--hhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhh
Confidence 9999 9999999999999999999999999999999999999999999999999999988753221111000
Q ss_pred -------CCCCCCCH-HHHHHHHHhcccC---------CCCChHHHHHHHHHh---------------cCCcc--ccccC
Q 002310 610 -------NPIHPLSE-TEILKFAAGVESN---------TVHPIGKAIVEAAEF---------------SNCQN--VKVAD 655 (937)
Q Consensus 610 -------~~~~~~~~-~~ll~~aa~~e~~---------s~hP~~~Ai~~~a~~---------------~~~~~--~~~~~ 655 (937)
........ ..+. ++.+.++ ..+|++..+.+.... ..... .++..
T Consensus 510 ~~~~~~l~~~~~~~~~~~~~--~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~ 587 (1140)
T KOG0208|consen 510 LQLFYKLSLRSSSLPMGNLV--AAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPE 587 (1140)
T ss_pred ccceeeccccccCCchHHHH--HHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCc
Confidence 00000001 1111 1112222 245665544332211 00000 00100
Q ss_pred C---ceEE-----------ec----CCeeEEEEc-C-----eEEEeccHHHHHhcCCCCc---ch-hhHHHHHhCCCeEE
Q 002310 656 G---TFIE-----------EP----GSGTVAIIE-D-----RKVSVGTIDWLRSHGVDTS---TF-QEVEMEDLMNQSLV 707 (937)
Q Consensus 656 ~---~~~~-----------~~----g~g~~~~i~-~-----~~~~~G~~~~l~~~~~~~~---~~-~~~~~~~~~~~~~~ 707 (937)
. ...+ .+ =+.+...+. + ..|.||+||.+.+.|.+.. ++ +..+.+..+|.+++
T Consensus 588 ~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Yt~~GfRVI 667 (1140)
T KOG0208|consen 588 NAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEYTHQGFRVI 667 (1140)
T ss_pred ccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHHHhCCeEEE
Confidence 0 0000 00 011122221 1 2389999999999997643 22 33455778899888
Q ss_pred EEEE---------------------CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc
Q 002310 708 YVGV---------------------DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD 766 (937)
Q Consensus 708 ~v~~---------------------~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~ 766 (937)
.++. |.+|+|++.||++||++++.+|++|++++||++|+||||..||..+||+||+.+.
T Consensus 668 AlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p 747 (1140)
T KOG0208|consen 668 ALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEP 747 (1140)
T ss_pred EEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCC
Confidence 8764 6789999999999999999999999999999999999999999999999998210
Q ss_pred --------------------------------------------------------------------------------
Q 002310 767 -------------------------------------------------------------------------------- 766 (937)
Q Consensus 767 -------------------------------------------------------------------------------- 766 (937)
T Consensus 748 ~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il 827 (1140)
T KOG0208|consen 748 QVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKIL 827 (1140)
T ss_pred CCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHH
Confidence
Q ss_pred ---eeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 767 ---KVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 767 ---~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
.|||||+|+||.++|+.||+.|++|+|||||+||+.|||+|||||+++++ .|.-+|.+.-.-.+++.++++|++|
T Consensus 828 ~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEG 905 (1140)
T KOG0208|consen 828 LKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREG 905 (1140)
T ss_pred hcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhh
Confidence 69999999999999999999999999999999999999999999999633 3455678777667999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchHHHHHHHhhhhHHHHHHHHhhhccccccccccccCCCCCCcc
Q 002310 844 RLTMKTVKQNLWWAFGYNIVGIPIAAGVLLPVTGTMLTPSIAGALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVN 923 (937)
Q Consensus 844 R~~~~~i~~nl~~a~~~Nii~i~la~~~~~~~~g~~l~P~~a~~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~ 923 (937)
|..+-.-..-+.|...|-++.....+ ++|. .+..++-. ..+..--++.+.-|+.|. ++.+.+...+++||.++-
T Consensus 906 RaALVTSf~~FkYMalYs~iqFisv~-~LY~-~~~nl~D~---Qfl~iDLlii~pia~~m~-~~~a~~~L~~~rP~~~L~ 979 (1140)
T KOG0208|consen 906 RAALVTSFACFKYMALYSAIQFISVV-FLYL-INSNLGDL---QFLFIDLLIITPIAVMMS-RFDASDKLFPKRPPTNLL 979 (1140)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhh-eeee-ecccccch---hhhhhHHHHHHHHHHHHc-cCcHHHHhcCCCCCcccc
Confidence 99999888888899999887654333 2332 22223322 222222223333344454 446666667888888753
No 29
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.4e-63 Score=621.21 Aligned_cols=626 Identities=17% Similarity=0.122 Sum_probs=428.8
Q ss_pred hccHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 002310 276 GPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355 (937)
Q Consensus 276 ~~g~~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~ 355 (937)
|..|.|++..+..+++|..|+.+|+..-+.....+| ..++..++.+.++++++..+++.+|++.++|+++..+
T Consensus 97 Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s-------~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N 169 (1178)
T PLN03190 97 YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLA-------VFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIEN 169 (1178)
T ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcc-------cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhc
Confidence 445788889999999999999999533322111111 1123445667788888889999999999999998765
Q ss_pred HhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee-----cceeeeeccccCCCcccccCCCC
Q 002310 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIPES 430 (937)
Q Consensus 356 ~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~-----G~~~VDeS~LTGEs~pv~K~~g~ 430 (937)
++.++++++ |.++++++++|+|||+|.|++||+||||++|++ |.++||||+|||||.|+.|.+++
T Consensus 170 ------~~~~~v~~~----~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 170 ------NRLAWVLVD----DQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred ------CcEEEEEEC----CeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 467888876 578999999999999999999999999999997 88999999999999999997652
Q ss_pred c---------------------------------------------cccceeeecc-eEEEEEEecCCccHHHHHHHHHH
Q 002310 431 E---------------------------------------------VAAGSINLNG-TLTVEVRRPGGETAMGDIVRLVE 464 (937)
Q Consensus 431 ~---------------------------------------------v~aGt~~~~G-~~~~~V~~~G~~T~~~~i~~~v~ 464 (937)
. ++.|+.+.+. .+.+.|++||.+|. ++....
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~N~~ 316 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AMLNNS 316 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh---HhhcCC
Confidence 1 2223333332 68999999999995 444444
Q ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cc-cccchhcc--------CC-----cH-HHHHHHHHH
Q 002310 465 EAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFG---AH-VLPTAIQY--------GG-----PV-SLALQLSCS 526 (937)
Q Consensus 465 ~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~---~~-~~~~~~~~--------~~-----~~-~~~l~~ai~ 526 (937)
.+..+.+++++.++++..+++.+.++++++++++...+. .. .+...++. .. .+ ...+..++.
T Consensus 317 ~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 396 (1178)
T PLN03190 317 GAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLM 396 (1178)
T ss_pred CCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHH
Confidence 556788999999999988877777777766655432211 10 00000110 00 01 122333444
Q ss_pred HHhhcccccccccchhhHHHHHHHHHHHhhhcC----------cEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEE
Q 002310 527 VLRKETSICCCLSMCPWLSHAYSYVGTSLGATR----------GLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKV 596 (937)
Q Consensus 527 vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~----------gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i 596 (937)
.+++++..+|..|. +.+.+........+.++ ++.+|+.+.+|+||+|++||+|||||||+|+|+++++
T Consensus 397 ~lil~~~~IPISL~--Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~ 474 (1178)
T PLN03190 397 SVIVFQIMIPISLY--ISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCA 474 (1178)
T ss_pred HHHHHHhhcceeee--eeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEE
Confidence 44455558999998 77777775534444332 3789999999999999999999999999999999999
Q ss_pred EecCCcCCCCCC----------------C-CCCC--------------CCC-H-----HHHHH-HHHh--c-----c---
Q 002310 597 VTSGSLTDPNSK----------------Q-NPIH--------------PLS-E-----TEILK-FAAG--V-----E--- 628 (937)
Q Consensus 597 ~~~~~~~~~~~~----------------~-~~~~--------------~~~-~-----~~ll~-~aa~--~-----e--- 628 (937)
...+..|+.... . .+.. +.+ + .+++. ++-+ + +
T Consensus 475 ~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~ 554 (1178)
T PLN03190 475 SIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTS 554 (1178)
T ss_pred EECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCC
Confidence 987655532110 0 0000 000 0 11222 2221 1 1
Q ss_pred --------cCCCCChHHHHHHHHHhcCCccccccCCc-----------e------EEec-CCeeEEEEc---C--eEEEe
Q 002310 629 --------SNTVHPIGKAIVEAAEFSNCQNVKVADGT-----------F------IEEP-GSGTVAIIE---D--RKVSV 677 (937)
Q Consensus 629 --------~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~-----------~------~~~~-g~g~~~~i~---~--~~~~~ 677 (937)
..+.+|.+.|++++|+..|+.....+... + ...+ .+.+...++ + ..++|
T Consensus 555 ~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~K 634 (1178)
T PLN03190 555 DPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVK 634 (1178)
T ss_pred CccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEe
Confidence 22348999999999999887432221111 1 0111 122222332 2 24789
Q ss_pred ccHHHHHhcCCCCcc-------hhhHHHHHhCCCeEEEE--------------------------------------EEC
Q 002310 678 GTIDWLRSHGVDTST-------FQEVEMEDLMNQSLVYV--------------------------------------GVD 712 (937)
Q Consensus 678 G~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~v--------------------------------------~~~ 712 (937)
|+++.+.+.|..... .+..++.+.+|.+++.+ +.|
T Consensus 635 GA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~d 714 (1178)
T PLN03190 635 GADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENN 714 (1178)
T ss_pred cCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcC
Confidence 999999988753211 11223345556655543 347
Q ss_pred CEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---------------------------
Q 002310 713 NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--------------------------- 765 (937)
Q Consensus 713 ~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--------------------------- 765 (937)
++++|+++++|++|++++++|+.|+++||+|||+|||+.+||.+||++|||.+
T Consensus 715 L~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~ 794 (1178)
T PLN03190 715 LTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMS 794 (1178)
T ss_pred cEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhh
Confidence 78999999999999999999999999999999999999999999999888710
Q ss_pred -------------------------------------c----------------eeEeccChhhHHHHHHHHhcC-CCEE
Q 002310 766 -------------------------------------D----------------KVLSGVKPNEKKRFINELQND-ENVV 791 (937)
Q Consensus 766 -------------------------------------~----------------~v~ar~~Pe~K~~iV~~Lq~~-G~~V 791 (937)
+ .||||++|+||+++|+.+|+. +++|
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vt 874 (1178)
T PLN03190 795 KKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMT 874 (1178)
T ss_pred hhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEE
Confidence 0 279999999999999999997 5799
Q ss_pred EEEcCCcccHHHHHhCCeeEEe-C-CChHHHHhhcCEEEeCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 792 AMVGDGINDAAALASSHIGVAM-G-GGVGAASEVASVVLMGNRLSQLLVALE-LSRLTMKTVKQNLWWAFGYNIVGIPIA 868 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIam-g-~gt~~a~~aADivL~~~~l~~l~~~i~-~~R~~~~~i~~nl~~a~~~Nii~i~la 868 (937)
+|||||+||+|||++|||||++ | +|. .|..+||+.+. .|+.|.+++. .||..|+++.+-+.|.|..|++.+..-
T Consensus 875 laIGDGaNDv~mIq~AdVGIGIsG~EG~-qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 875 LAIGDGANDVSMIQMADVGVGISGQEGR-QAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred EEECCCcchHHHHHhcCeeeeecCchhH-HHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987 3 344 56679999995 6888998888 499999999999999999998755432
Q ss_pred hhhhhccccccchHHHHH-HHhhhhHHHHHHHHhhhccccccccccccCCCCCCcccccc
Q 002310 869 AGVLLPVTGTMLTPSIAG-ALMGLSSIGVMANSLLLRLKFSSKQKASFQAPSSRVNSNVD 927 (937)
Q Consensus 869 ~~~~~~~~g~~l~P~~a~-~~m~~ssl~v~~nsl~l~~~~~~~~~~~~~~~~~~~~~~~~ 927 (937)
+ ++-.+.|+--+|++-. .++..+.+...+.-+.+......-+......-|+-++.|..
T Consensus 952 f-~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~ 1010 (1178)
T PLN03190 952 F-WYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQR 1010 (1178)
T ss_pred H-HHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhcc
Confidence 2 1111233333444433 33333444444443333222222222234444555555444
No 30
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-64 Score=555.28 Aligned_cols=500 Identities=23% Similarity=0.266 Sum_probs=395.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecc
Q 002310 330 IMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGR 409 (937)
Q Consensus 330 ~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~ 409 (937)
..++.+++++.-+...+++++.+....|+..+..++.|+|| |+|.++++.+||||||+.++.|++||||++|++|+
T Consensus 101 ~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRD----Gkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD 176 (942)
T KOG0205|consen 101 VGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRD----GKWSEQEASILVPGDILSIKLGDIIPADARLLEGD 176 (942)
T ss_pred hhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeec----CeeeeeeccccccCceeeeccCCEecCccceecCC
Confidence 34555566666555555667777888888888889999998 69999999999999999999999999999999998
Q ss_pred -eeeeeccccCCCcccccCCCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH
Q 002310 410 -STVDESSFTGEPLPVTKIPESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGV 488 (937)
Q Consensus 410 -~~VDeS~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~v 488 (937)
..||+|.|||||.|+.|.+||.+|+||.+.+|++.++|++||.+|++||-..++.. -.....+|+-++.+..+....+
T Consensus 177 ~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si 255 (942)
T KOG0205|consen 177 PLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSI 255 (942)
T ss_pred ccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999987 5566789999988876654333
Q ss_pred HHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEEcCchH
Q 002310 489 IALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNI 568 (937)
Q Consensus 489 l~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~ 568 (937)
.+--++.+++.+.... ..+.....-+.++++ ..+|.+++ -.+.+.++++..+++++|.++|...+
T Consensus 256 ~~g~lie~~vmy~~q~-----------R~~r~~i~nLlvllI--GgiPiamP--tVlsvTMAiGs~rLaqqgAItkrmtA 320 (942)
T KOG0205|consen 256 ALGMLIEITVMYPIQH-----------RLYRDGIDNLLVLLI--GGIPIAMP--TVLSVTMAIGSHRLSQQGAITKRMTA 320 (942)
T ss_pred HHHHHHHHHhhhhhhh-----------hhhhhhhhheheeee--cccccccc--eeeeehhhHHHHHHHhcccHHHHHHH
Confidence 2222222222111111 122333334455555 23888887 77777888999999999999999999
Q ss_pred HhhcccccEEEEeCCCccCCCccEEEE--EEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcc-cCCCCChHHHHHHHHHh
Q 002310 569 LEKFAMVNTVVFDKTGTLTIGRPVVTK--VVTSGSLTDPNSKQNPIHPLSETEILKFAAGVE-SNTVHPIGKAIVEAAEF 645 (937)
Q Consensus 569 lE~lg~v~~i~fDKTGTLT~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e-~~s~hP~~~Ai~~~a~~ 645 (937)
+|+|+.+|++|+|||||||.|+++|.+ +..+ .++.++++++-.|+... ....+.+++|++...++
T Consensus 321 IEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~------------v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~d 388 (942)
T KOG0205|consen 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF------------VKGVDKDDVLLTAARASRKENQDAIDAAIVGMLAD 388 (942)
T ss_pred HHHhhCceEEeecCcCceeecceecCcCcceee------------ecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcC
Confidence 999999999999999999999999988 4222 15566777766655443 34567888999887654
Q ss_pred cCCccccccCCceEEecC----CeeEEEE-c--C--eEEEeccHHHHHhcCCCCcchh-----hHHHHHhCCCeEEEEEE
Q 002310 646 SNCQNVKVADGTFIEEPG----SGTVAII-E--D--RKVSVGTIDWLRSHGVDTSTFQ-----EVEMEDLMNQSLVYVGV 711 (937)
Q Consensus 646 ~~~~~~~~~~~~~~~~~g----~g~~~~i-~--~--~~~~~G~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~ 711 (937)
-... ...-..++..|. +.+..++ + | .++.||+|+++.+.|....+.. .+.+....|.+.+.+++
T Consensus 389 PKea--ra~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVAr 466 (942)
T KOG0205|consen 389 PKEA--RAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVAR 466 (942)
T ss_pred HHHH--hhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhh
Confidence 1000 000011222221 2233333 2 2 3488999999998876543322 23345566766666664
Q ss_pred C-------------CEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-------------
Q 002310 712 D-------------NMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK------------- 765 (937)
Q Consensus 712 ~-------------~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~------------- 765 (937)
. -+++|+.-+-||+|.|..++|.+-...|++|.|+|||....++..++++|+-.
T Consensus 467 q~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~ 546 (942)
T KOG0205|consen 467 QEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGK 546 (942)
T ss_pred hccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCC
Confidence 2 27999999999999999999999999999999999999999999999999721
Q ss_pred ---------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeC
Q 002310 766 ---------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMG 830 (937)
Q Consensus 766 ---------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~ 830 (937)
.+=||.+.||+|.++|+.||++|+.|+|+|||+||+||||.||+||++..++|+|+.++||||+.
T Consensus 547 ~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVlte 626 (942)
T KOG0205|consen 547 DGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626 (942)
T ss_pred CCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcC
Confidence 25689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 831 NRLSQLLVALELSRLTMKTVKQNLWWAFGYNIV 863 (937)
Q Consensus 831 ~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Nii 863 (937)
..++.+..++..||.+|++++..-.|++...+-
T Consensus 627 pglSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 627 PGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred CCchhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 999999999999999999999988888775543
No 31
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-54 Score=479.87 Aligned_cols=497 Identities=20% Similarity=0.226 Sum_probs=362.5
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeee
Q 002310 323 KAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPAD 402 (937)
Q Consensus 323 ~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaD 402 (937)
..|+.+.++++++.++.+.+|+..|++-++..++ +.-+++.+++ ....|+++|++||+|.+..+++||||
T Consensus 129 ~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Ns------e~y~~ltr~~----~~~~~Ss~i~vGDvi~v~K~~RVPAD 198 (1051)
T KOG0210|consen 129 STYWGPLGFVLTITLIKEAVDDLKRRRRDRELNS------EKYTKLTRDG----TRREPSSDIKVGDVIIVHKDERVPAD 198 (1051)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhheeeccCC----cccccccccccccEEEEecCCcCCcc
Confidence 5677788889999999999999999887776653 2333443332 33349999999999999999999999
Q ss_pred EEEe-----ecceeeeeccccCCCcccccCC-----------------------------------------------CC
Q 002310 403 GVVR-----AGRSTVDESSFTGEPLPVTKIP-----------------------------------------------ES 430 (937)
Q Consensus 403 gvll-----~G~~~VDeS~LTGEs~pv~K~~-----------------------------------------------g~ 430 (937)
.+++ +|+++|-+-.|+||++.+.|.| ++
T Consensus 199 milLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~Lsven 278 (1051)
T KOG0210|consen 199 MILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVEN 278 (1051)
T ss_pred eEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccc
Confidence 9998 5889999999999999877744 23
Q ss_pred ccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccch
Q 002310 431 EVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTA 510 (937)
Q Consensus 431 ~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~ 510 (937)
.++++|++.+|.+.+.|++||.+|+- +.+...++.+-..++..+|.+.+++...+++++++....- +
T Consensus 279 tLWanTVvAs~t~~gvVvYTG~dtRs---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~---g------- 345 (1051)
T KOG0210|consen 279 TLWANTVVASGTAIGVVVYTGRDTRS---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMK---G------- 345 (1051)
T ss_pred eeeeeeeEecCcEEEEEEEecccHHH---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhh---c-------
Confidence 57899999999999999999999943 2223334455566777888888888777777776554331 1
Q ss_pred hccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhc----CcEEEcCchHHhhcccccEEEEeCCCcc
Q 002310 511 IQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGAT----RGLLLRGGNILEKFAMVNTVVFDKTGTL 586 (937)
Q Consensus 511 ~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~----~gilvk~~~~lE~lg~v~~i~fDKTGTL 586 (937)
.+.+|...+.+++.++.. .+|..|- .-+-++-.+......+ .|.++|+.+..|+||++.++.+||||||
T Consensus 346 --~~~~wyi~~~RfllLFS~---IIPISLR--vnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTL 418 (1051)
T KOG0210|consen 346 --FGSDWYIYIIRFLLLFSS---IIPISLR--VNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTL 418 (1051)
T ss_pred --CCCchHHHHHHHHHHHhh---hceeEEE--EehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCcc
Confidence 134667777776666555 8888777 6666665544444432 3899999999999999999999999999
Q ss_pred CCCccEEEEEEecCCcCCCCC-------------C--CCC-------CCCCC---HHHHHHHHHhc------------cc
Q 002310 587 TIGRPVVTKVVTSGSLTDPNS-------------K--QNP-------IHPLS---ETEILKFAAGV------------ES 629 (937)
Q Consensus 587 T~~~~~v~~i~~~~~~~~~~~-------------~--~~~-------~~~~~---~~~ll~~aa~~------------e~ 629 (937)
|+|+|.+++++.+...|..+. + .+. ..+.+ .+.++.++-+. ..
T Consensus 419 TqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sY 498 (1051)
T KOG0210|consen 419 TQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSY 498 (1051)
T ss_pred ccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEe
Confidence 999999999997654443220 0 000 00111 12233343332 23
Q ss_pred CCCCChHHHHHHHHHhcCCccccccCCc------------e--------EE-ecCCeeEEEEc--Ce--EEEeccHHHHH
Q 002310 630 NTVHPIGKAIVEAAEFSNCQNVKVADGT------------F--------IE-EPGSGTVAIIE--DR--KVSVGTIDWLR 684 (937)
Q Consensus 630 ~s~hP~~~Ai~~~a~~~~~~~~~~~~~~------------~--------~~-~~g~g~~~~i~--~~--~~~~G~~~~l~ 684 (937)
+..+|.+.||+++.+..|......+... + .. ....|+....+ ++ -+.||+.-.|.
T Consensus 499 QAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs 578 (1051)
T KOG0210|consen 499 QAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMS 578 (1051)
T ss_pred ecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHh
Confidence 4567999999998877666543222111 1 11 12346655544 22 27899886554
Q ss_pred hcCCCCcc--hhhHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEecC
Q 002310 685 SHGVDTST--FQEVEMEDLMNQSLVYVG---------------------------------------VDNMLAGLIYVED 723 (937)
Q Consensus 685 ~~~~~~~~--~~~~~~~~~~~~~~~~v~---------------------------------------~~~~~lG~i~l~D 723 (937)
..- .+.+ .++..+.+.+|.+.+.++ .|++++|+.++||
T Consensus 579 ~iV-q~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVED 657 (1051)
T KOG0210|consen 579 GIV-QYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVED 657 (1051)
T ss_pred ccc-ccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHH
Confidence 321 1111 122223334444444444 4778999999999
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--------------------------------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-------------------------------------- 765 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-------------------------------------- 765 (937)
++++|++.+++.||++||||||+|||+.+||..||+..++..
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~S 737 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGES 737 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCch
Confidence 999999999999999999999999999999999999999821
Q ss_pred --------------------ceeEeccChhhHHHHHHHHhcC-CCEEEEEcCCcccHHHHHhCCeeEEe-CCChHHHHhh
Q 002310 766 --------------------DKVLSGVKPNEKKRFINELQND-ENVVAMVGDGINDAAALASSHIGVAM-GGGVGAASEV 823 (937)
Q Consensus 766 --------------------~~v~ar~~Pe~K~~iV~~Lq~~-G~~VamvGDG~NDa~AL~~AdVGIam-g~gt~~a~~a 823 (937)
..|+||++|+||+++++.+|+. |+.|++||||.||+.|+++|||||++ |.....|.-+
T Consensus 738 l~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLA 817 (1051)
T KOG0210|consen 738 LEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLA 817 (1051)
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchh
Confidence 1689999999999999999885 88999999999999999999999999 5433445668
Q ss_pred cCEEEeCCChhHHHHHHHH-HHHHHHHHHH
Q 002310 824 ASVVLMGNRLSQLLVALEL-SRLTMKTVKQ 852 (937)
Q Consensus 824 ADivL~~~~l~~l~~~i~~-~R~~~~~i~~ 852 (937)
||+.+. .|+.+-+++.+ ||+.|++--+
T Consensus 818 ADfSIt--qF~Hv~rLLl~HGR~SYkrsa~ 845 (1051)
T KOG0210|consen 818 ADFSIT--QFSHVSRLLLWHGRNSYKRSAK 845 (1051)
T ss_pred ccccHH--HHHHHHHHhhccccchHHHHHH
Confidence 999986 59999999888 9999887544
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-51 Score=461.38 Aligned_cols=462 Identities=21% Similarity=0.223 Sum_probs=327.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcC---CCEEeeeEEE
Q 002310 329 PIMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLP---GDRIPADGVV 405 (937)
Q Consensus 329 ~~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~---Ge~IPaDgvl 405 (937)
..+-++++..-+.--.+++.|+.+.++++ ...|..+.|+|+ ++|+.+..+||.|||+|.|.. ...||||.++
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~M-g~kpy~I~v~R~----kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllL 294 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRTM-GNKPYTINVYRN----KKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLL 294 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEEEec----CcceeccccccCCCceEEeccCcccCcCCceEEE
Confidence 33333333444444456677777777765 446788899987 489999999999999999977 5689999999
Q ss_pred eecceeeeeccccCCCcccccCC-----------------CCccccceeee-------------cceEEEEEEecCCccH
Q 002310 406 RAGRSTVDESSFTGEPLPVTKIP-----------------ESEVAAGSINL-------------NGTLTVEVRRPGGETA 455 (937)
Q Consensus 406 l~G~~~VDeS~LTGEs~pv~K~~-----------------g~~v~aGt~~~-------------~G~~~~~V~~~G~~T~ 455 (937)
+.|+|.|||+||||||.|..|.+ ...+|+||.++ +|-+.+.|.+||.+|.
T Consensus 295 L~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTS 374 (1160)
T KOG0209|consen 295 LRGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETS 374 (1160)
T ss_pred EecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEecccccc
Confidence 99999999999999999999976 12479999886 5789999999999999
Q ss_pred HHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccC-CcHHHHHHHHHHHHhhcccc
Q 002310 456 MGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAHVLPTAIQYG-GPVSLALQLSCSVLRKETSI 534 (937)
Q Consensus 456 ~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~-~~~~~~l~~ai~vlvv~~~~ 534 (937)
.|+++|.+....++-+.-.+ -+.+|..+.+++|++...+.|.-+.. .+ ..-++-+.-++ .+.+..
T Consensus 375 QGkLvRtilf~aervTaNn~----Etf~FILFLlVFAiaAa~Yvwv~Gsk-------d~~RsrYKL~LeC~---LIlTSV 440 (1160)
T KOG0209|consen 375 QGKLVRTILFSAERVTANNR----ETFIFILFLLVFAIAAAGYVWVEGSK-------DPTRSRYKLFLECT---LILTSV 440 (1160)
T ss_pred CCceeeeEEecceeeeeccH----HHHHHHHHHHHHHHHhhheEEEeccc-------Ccchhhhheeeeee---EEEecc
Confidence 99999988765544443222 22334333333333322111111110 01 00111111122 223347
Q ss_pred cccccchhhHHHHHHHHHHHhhhcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCC
Q 002310 535 CCCLSMCPWLSHAYSYVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHP 614 (937)
Q Consensus 535 ~Pcal~~pla~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~ 614 (937)
+|.-|+ +-..+++-.++..++|.|+.+..+-.+--.|++|+.|||||||||+..|.|..+.-....... ..+...
T Consensus 441 vPpELP--mELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~---~~~~s~ 515 (1160)
T KOG0209|consen 441 VPPELP--MELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGA---LTPASK 515 (1160)
T ss_pred CCCCCc--hhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCccc---ccchhh
Confidence 888888 888899999999999999999999999999999999999999999999999998643221111 111112
Q ss_pred CCHHHHHHHHHh--c---c-cCCCCChHHHHHHHHHhcCCccc--cccCCc---eEEec---------CCeeEEEEcC--
Q 002310 615 LSETEILKFAAG--V---E-SNTVHPIGKAIVEAAEFSNCQNV--KVADGT---FIEEP---------GSGTVAIIED-- 672 (937)
Q Consensus 615 ~~~~~ll~~aa~--~---e-~~s~hP~~~Ai~~~a~~~~~~~~--~~~~~~---~~~~~---------g~g~~~~i~~-- 672 (937)
...+.++.+|.+ + | .-..+|+++|.+++....-.... ..+..+ +..+. ...+.+..++
T Consensus 516 ~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g 595 (1160)
T KOG0209|consen 516 APNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPG 595 (1160)
T ss_pred CCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCC
Confidence 222334444433 2 2 34579999999998743211000 000010 10000 1111222221
Q ss_pred -----eEEEeccHHHHHhcCCCCc-chhh-HHHHHhCCCeEEEEEE---------------------CCEEEEEEEecCc
Q 002310 673 -----RKVSVGTIDWLRSHGVDTS-TFQE-VEMEDLMNQSLVYVGV---------------------DNMLAGLIYVEDR 724 (937)
Q Consensus 673 -----~~~~~G~~~~l~~~~~~~~-~~~~-~~~~~~~~~~~~~v~~---------------------~~~~lG~i~l~D~ 724 (937)
-.-.||+||.++++-.+.+ ..++ ..++..+|.+++.+++ |++|.|++.|.-|
T Consensus 596 ~s~k~~~aVKGAPEvi~~ml~dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CP 675 (1160)
T KOG0209|consen 596 SSEKYFVAVKGAPEVIQEMLRDVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCP 675 (1160)
T ss_pred CceEEEEEecCCHHHHHHHHHhCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCC
Confidence 1257899999987644432 2222 4567778888877653 6789999999999
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---------------------------------------
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--------------------------------------- 765 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--------------------------------------- 765 (937)
+|+|++++|+.|++.+++++|+||||+.||.++|+++||..
T Consensus 676 lK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l 755 (1160)
T KOG0209|consen 676 LKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLL 755 (1160)
T ss_pred CCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhh
Confidence 99999999999999999999999999999999999999821
Q ss_pred ----------------------------ceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 766 ----------------------------DKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 766 ----------------------------~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
..||||+.|.||..+|..|++.|+.++|||||+||+.|||+||||||+-
T Consensus 756 ~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 756 AETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred hhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 0699999999999999999999999999999999999999999999984
No 33
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.7e-50 Score=487.86 Aligned_cols=566 Identities=16% Similarity=0.141 Sum_probs=407.0
Q ss_pred hccHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 002310 276 GPGFQLILDGVKSLFKGAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMT 355 (937)
Q Consensus 276 ~~g~~~~~~a~~~l~~~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il~~~llg~~le~~~~~k~~~~l~ 355 (937)
|..+.|+++.+..+++|..|.++|+..-....- +| ..++.....+.++++....+...+|++.|++.++.++
T Consensus 42 Yt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~-------~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN 113 (1151)
T KOG0206|consen 42 YTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS-------PFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVN 113 (1151)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc-------ccCccceeeceeeeehHHHHHHHHhhhhhhhccHHhh
Confidence 334577888888888988999999654333221 22 1122334445667777788999999999999999887
Q ss_pred HhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee-----cceeeeeccccCCCcccccCCC-
Q 002310 356 GLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-----GRSTVDESSFTGEPLPVTKIPE- 429 (937)
Q Consensus 356 ~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~-----G~~~VDeS~LTGEs~pv~K~~g- 429 (937)
+ .++.|.++++ .+++..+++|++||+|.+..+|.+|||.++++ |.|+|++++|+||++.+.|+.-
T Consensus 114 ~------~~~~v~~~~~---~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~ 184 (1151)
T KOG0206|consen 114 N------RKVEVLRGDG---CFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALE 184 (1151)
T ss_pred c------ceeEEecCCc---eeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehh
Confidence 4 5778876532 38999999999999999999999999999994 6699999999999999887540
Q ss_pred ----------------------------------------------Cccccceeeecc-eEEEEEEecCCccHHHHHHHH
Q 002310 430 ----------------------------------------------SEVAAGSINLNG-TLTVEVRRPGGETAMGDIVRL 462 (937)
Q Consensus 430 ----------------------------------------------~~v~aGt~~~~G-~~~~~V~~~G~~T~~~~i~~~ 462 (937)
+.++.|+.+.+. .+.+.|+.+|++|.+ +..
T Consensus 185 ~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~---~~n 261 (1151)
T KOG0206|consen 185 CTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKL---MQN 261 (1151)
T ss_pred hhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchH---HHh
Confidence 113456666664 678899999999955 445
Q ss_pred HHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cccchhcc-CC-cHHHHHHHHHHHHhhccccccc
Q 002310 463 VEEAQSREAPVQRLADQVSGHFTYGVIALSAATFVFWNLFGAH---VLPTAIQY-GG-PVSLALQLSCSVLRKETSICCC 537 (937)
Q Consensus 463 v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~~~i~~~~~~~~---~~~~~~~~-~~-~~~~~l~~ai~vlvv~~~~~Pc 537 (937)
...+..+++++++..++....++.+.+.++++..+...+.... ..+..++. .. +...++...++.++.++..+|.
T Consensus 262 ~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPI 341 (1151)
T KOG0206|consen 262 SGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPI 341 (1151)
T ss_pred cCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEE
Confidence 5568889999999999988777777776666655543322211 11111111 11 2345566667777777779998
Q ss_pred ccchhhHHHHHHHHHHHhh----------hcCcEEEcCchHHhhcccccEEEEeCCCccCCCccEEEEEEecCCcCCCCC
Q 002310 538 LSMCPWLSHAYSYVGTSLG----------ATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNS 607 (937)
Q Consensus 538 al~~pla~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~ 607 (937)
.|. ..+.+.-....... .......|+.+..|+||+|++|++|||||||+|.|++.+|.+.+..|+...
T Consensus 342 SLy--vsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 342 SLY--VSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEE--EEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 887 55555443333222 245788999999999999999999999999999999999999988776542
Q ss_pred CCC------------------C----------------CCCCCHHHHHHHHH---h-----------cccCCCCChHHHH
Q 002310 608 KQN------------------P----------------IHPLSETEILKFAA---G-----------VESNTVHPIGKAI 639 (937)
Q Consensus 608 ~~~------------------~----------------~~~~~~~~ll~~aa---~-----------~e~~s~hP~~~Ai 639 (937)
... . .......+.....+ . +.+...+|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 210 0 00001112222211 1 1234568999999
Q ss_pred HHHHHhcCCccccccCCceEEecCCe-------------------eEEEEc---C--eEEEeccHHHHHhcCCCCc-ch-
Q 002310 640 VEAAEFSNCQNVKVADGTFIEEPGSG-------------------TVAIIE---D--RKVSVGTIDWLRSHGVDTS-TF- 693 (937)
Q Consensus 640 ~~~a~~~~~~~~~~~~~~~~~~~g~g-------------------~~~~i~---~--~~~~~G~~~~l~~~~~~~~-~~- 693 (937)
+++|++.|+.........+... ..| ++..+. + ..++||+...+.++..... ..
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~-~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~ 578 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIR-ELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLR 578 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEe-ccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHH
Confidence 9999999887654443332222 222 222221 1 2389999988766544211 00
Q ss_pred ----hhHHHHHhCCCeEEEE--------------------------------------EECCEEEEEEEecCcCChhHHH
Q 002310 694 ----QEVEMEDLMNQSLVYV--------------------------------------GVDNMLAGLIYVEDRIRDDAAH 731 (937)
Q Consensus 694 ----~~~~~~~~~~~~~~~v--------------------------------------~~~~~~lG~i~l~D~lr~~a~e 731 (937)
+..++++.+|.+.+++ +.|+.++|.+++||+||++++|
T Consensus 579 e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPe 658 (1151)
T KOG0206|consen 579 EKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPE 658 (1151)
T ss_pred HHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchH
Confidence 1122333444444443 3478999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC----------------------------------------------
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---------------------------------------------- 765 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---------------------------------------------- 765 (937)
+|+.|++||||+||+|||+.+||.+|+..|++.+
T Consensus 659 tI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 738 (1151)
T KOG0206|consen 659 TIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSE 738 (1151)
T ss_pred HHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCc
Confidence 9999999999999999999999999999999711
Q ss_pred -c-------------------------------eeEeccChhhHHHHHHHHhc-CCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 766 -D-------------------------------KVLSGVKPNEKKRFINELQN-DENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 766 -~-------------------------------~v~ar~~Pe~K~~iV~~Lq~-~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
. .++||++|.||+.+|+..++ .+..+++||||+||++|+++|||||+
T Consensus 739 ~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVG 818 (1151)
T KOG0206|consen 739 KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVG 818 (1151)
T ss_pred CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCee
Confidence 0 58999999999999999974 58899999999999999999999999
Q ss_pred eC-CChHHHHhhcCEEEeCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 813 MG-GGVGAASEVASVVLMGNRLSQLLVALE-LSRLTMKTVKQNLWWAFGYNIVGIP 866 (937)
Q Consensus 813 mg-~gt~~a~~aADivL~~~~l~~l~~~i~-~~R~~~~~i~~nl~~a~~~Nii~i~ 866 (937)
++ .....|..+||+.+.. |+-+.+++. .||..|.++.+.+.+.|+.|+....
T Consensus 819 IsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~ 872 (1151)
T KOG0206|consen 819 ISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTF 872 (1151)
T ss_pred eccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHH
Confidence 96 3444455689988864 555555544 3999999999999999999986553
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.5e-33 Score=299.89 Aligned_cols=223 Identities=25% Similarity=0.415 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCce-EEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEee-c
Q 002310 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSK-ARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRA-G 408 (937)
Q Consensus 331 ~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~-~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~-G 408 (937)
+++++++++.+++.++++|+.+.++++.+..+++ ++|+|+ |++++++++||+|||+|.+++||+|||||+|++ |
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~----~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g 76 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRD----GRWQKIPSSELVPGDIIILKAGDIVPADGILLESG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEET----TEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEec----cccccchHhhccceeeeecccccccccCccceecc
Confidence 4677889999999999999999999999988887 888877 599999999999999999999999999999999 9
Q ss_pred ceeeeeccccCCCcccccC-----CCCccccceeeecceEEEEEEecCCccHHHHHHHHHHHhhccCChHHHHHHHHHHH
Q 002310 409 RSTVDESSFTGEPLPVTKI-----PESEVAAGSINLNGTLTVEVRRPGGETAMGDIVRLVEEAQSREAPVQRLADQVSGH 483 (937)
Q Consensus 409 ~~~VDeS~LTGEs~pv~K~-----~g~~v~aGt~~~~G~~~~~V~~~G~~T~~~~i~~~v~~a~~~~~~l~~~~d~~~~~ 483 (937)
.++||||.+|||+.|+.|. .++.+|+||.+.+|.+.++|++||.+|.++++.+.+.+++.+++++++.++++..+
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKI 156 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHH
Confidence 9999999999999999999 99999999999999999999999999999999999999888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccchhccCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHhhhcCcEEE
Q 002310 484 FTYGVIALSAATFVFWNLFGAHVLPTAIQYGGPVSLALQLSCSVLRKETSICCCLSMCPWLSHAYSYVGTSLGATRGLLL 563 (937)
Q Consensus 484 ~~~~vl~la~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ai~vlvv~~~~~Pcal~~pla~p~a~~~~~~~~a~~gilv 563 (937)
+++++++++++++++|++. ..+..+...+..++++++. +|||+++ +++|+++..+..+++++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~l~~---~~P~~l~--~~~~~~~~~~~~~~~~~~i~v 222 (230)
T PF00122_consen 157 LIIIILAIAILVFIIWFFN---------DSGISFFKSFLFAISLLIV---LIPCALP--LALPLSLAIAARRLAKNGIIV 222 (230)
T ss_dssp HHHHHHHHHHHHHHHCHTG---------STTCHCCHHHHHHHHHHHH---HS-TTHH--HHHHHHHHHHHHHHHHTTEEE
T ss_pred HHhcccccchhhhccceec---------ccccccccccccccceeee---eccccee--ehHHHHHHHHHHHHHHCCEEE
Confidence 9999998888888776552 1223456778888999999 9999999 999999999999999999999
Q ss_pred cCchHHhh
Q 002310 564 RGGNILEK 571 (937)
Q Consensus 564 k~~~~lE~ 571 (937)
|+++++|+
T Consensus 223 ~~~~a~E~ 230 (230)
T PF00122_consen 223 KNLSALEA 230 (230)
T ss_dssp SSTTHHHH
T ss_pred eCcccccC
Confidence 99999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.97 E-value=1.3e-30 Score=273.55 Aligned_cols=210 Identities=34% Similarity=0.509 Sum_probs=176.9
Q ss_pred ccEEEEeCCCccCCCccEEEEEEecCCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCChHHHHHHHHHhcCCcccccc
Q 002310 575 VNTVVFDKTGTLTIGRPVVTKVVTSGSLTDPNSKQNPIHPLSETEILKFAAGVESNTVHPIGKAIVEAAEFSNCQNVKVA 654 (937)
Q Consensus 575 v~~i~fDKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ll~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~ 654 (937)
|++||||||||||+|++.+ . . .....++.++...+..+.||+..+++.++...... ..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---------------~-~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~-~~-- 58 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---------------P-PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWS-KS-- 58 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---------------S-CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHH-SC--
T ss_pred CeEEEEecCCCcccCeEEE---E---------------e-ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccch-hh--
Confidence 6899999999999999999 1 0 34678899999999999999999999988763222 11
Q ss_pred CCceEEecCCeeEEEEcCeEEEeccHHHHHhcCCCCc-chhhHHHHHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHH
Q 002310 655 DGTFIEEPGSGTVAIIEDRKVSVGTIDWLRSHGVDTS-TFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVV 733 (937)
Q Consensus 655 ~~~~~~~~g~g~~~~i~~~~~~~G~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I 733 (937)
...+...+++|....+++. +. |+++++.+.+.... ...........+...+++..+..++|.+.+.|++|++++++|
T Consensus 59 ~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l 136 (215)
T PF00702_consen 59 LESFSEFIGRGISGDVDGI-YL-GSPEWIHELGIRVISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEAL 136 (215)
T ss_dssp CEEEEEETTTEEEEEEHCH-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHH
T ss_pred hhhheeeeecccccccccc-cc-ccchhhhhccccccccchhhhHHHhhCCcccceeecCeEEEEEeecCcchhhhhhhh
Confidence 3567888999999999887 44 99999877654321 111111223345567777789999999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc--ChhhH--HHHHHHHhcCCCEEEEEcCCcccHHHHHhCC
Q 002310 734 NSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV--KPNEK--KRFINELQNDENVVAMVGDGINDAAALASSH 808 (937)
Q Consensus 734 ~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~--~Pe~K--~~iV~~Lq~~G~~VamvGDG~NDa~AL~~Ad 808 (937)
+.|+++|++++|+|||+..++.++++++||....+++++ +|++| .++|+.||.+++.|+|||||+||++|+++||
T Consensus 137 ~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 137 QELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hhhhccCcceeeeeccccccccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999999999999999866799999 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.71 E-value=1.1e-16 Score=145.59 Aligned_cols=125 Identities=29% Similarity=0.473 Sum_probs=112.4
Q ss_pred CCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEE
Q 002310 712 DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVV 791 (937)
Q Consensus 712 ~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~V 791 (937)
-+++.+.++-.-++=++++++|+.|++. ++|++.|||...+....|+-+||+.+++++...|+.|.++|+.|++.+++|
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~ 96 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKV 96 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEE
Confidence 4567788888889999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCcccHHHHHhCCeeEEe-C--CChHHHHhhcCEEEeCCChhHHHHH
Q 002310 792 AMVGDGINDAAALASSHIGVAM-G--GGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVGIam-g--~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
.|||||+||.+||++||+||.. + +...-+.++||+++. ++..+.++
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 9999999999999999999977 3 456677799999985 34444443
No 37
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=99.27 E-value=1.5e-11 Score=102.25 Aligned_cols=62 Identities=34% Similarity=0.561 Sum_probs=58.7
Q ss_pred EEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcc
Q 002310 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFK 198 (937)
Q Consensus 129 ~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~ 198 (937)
+|.|+||+|++|+++|+++|.++|||.++++|+.++++.|.|+++..++ ++|.++|+++||+
T Consensus 1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~--------~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSI--------EKIIEAIEKAGYE 62 (62)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCH--------HHHHHHHHHTTSE
T ss_pred CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCH--------HHHHHHHHHhCcC
Confidence 5899999999999999999999999999999999999999999988776 8899999999995
No 38
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]
Probab=99.22 E-value=3.4e-11 Score=102.64 Aligned_cols=68 Identities=35% Similarity=0.462 Sum_probs=62.8
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
...+++|+||+|.+|+..|+++|++++||.+++||+..+++.|.+|+...+. ++|.++++++||++..
T Consensus 2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~--------~~i~~ai~~aGy~~~~ 69 (71)
T COG2608 2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDI--------EAIIEAIEDAGYKVEE 69 (71)
T ss_pred ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCH--------HHHHHHHHHcCCCeee
Confidence 4578999999999999999999999999999999999999999999977775 8999999999998753
No 39
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.04 E-value=1.2e-09 Score=113.51 Aligned_cols=116 Identities=17% Similarity=0.199 Sum_probs=96.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe--------c-------cChhhHHHHHHHHhcCC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS--------G-------VKPNEKKRFINELQNDE 788 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a--------r-------~~Pe~K~~iV~~Lq~~G 788 (937)
+++|++++.|+.||+.| ++.++||-....+..+++++|++ .+++ + ..|++|..+++.+++.|
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC
Confidence 68999999999999975 99999999999999999999996 3443 1 35789999999999888
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 789 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
..+.|+|||.||.+|++.|++||++.....+...+=|+- .-.+.+.+..++..+
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~-~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFP-AVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCC-cccCHHHHHHHHHHH
Confidence 889999999999999999999999975555554444433 335677777777765
No 40
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.94 E-value=5.1e-09 Score=116.06 Aligned_cols=115 Identities=22% Similarity=0.307 Sum_probs=99.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe------------c-----cChhhHHHHHHHHhc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS------------G-----VKPNEKKRFINELQN 786 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a------------r-----~~Pe~K~~iV~~Lq~ 786 (937)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++ .+++ + +..+.|.+.++.+.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 58999999999999999999999999988899999999996 3332 1 234689988888765
Q ss_pred C-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 787 D-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 787 ~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+ | ..+.++|||.||.+|++.|++|||+ ++.+..++.||.++..+++..+..++.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 4 3 5799999999999999999999999 778888999999999899998887754
No 41
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.89 E-value=1.2e-08 Score=101.28 Aligned_cols=105 Identities=19% Similarity=0.219 Sum_probs=85.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhc----CCCEEEEEcCCcccHHHHHhC
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQN----DENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~----~G~~VamvGDG~NDa~AL~~A 807 (937)
+|++|++.|+++.++|++....+..+.+++|+. .++... ..|.+.++.+.+ ....+.|+||+.||.+|++.|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a 111 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKV 111 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999997 555543 345555555433 235799999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCC----hhHHHHHH
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNR----LSQLLVAL 840 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~----l~~l~~~i 840 (937)
+++++|..+.+..+..+|+++..+. |..+.+.+
T Consensus 112 g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 112 GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 9999999888889999999997553 44444443
No 42
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.87 E-value=9.7e-09 Score=108.32 Aligned_cols=113 Identities=23% Similarity=0.348 Sum_probs=94.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----------------cChhhHHHHHHHHhc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 786 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----------------~~Pe~K~~iV~~Lq~ 786 (937)
+++|++++.++.|++.|+++.++|+.....+..+.+.+|+. .+++. ..+..|.++++.+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 68999999999999999999999999999999999999996 34431 123347777776654
Q ss_pred CC----CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHH
Q 002310 787 DE----NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 787 ~G----~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
+. ..+.||||+.||.+|++.|+++|+++ +.+..++.||.+|.+++|..+..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 42 35889999999999999999999996 567888899999999999887654
No 43
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.77 E-value=3.9e-08 Score=98.76 Aligned_cols=100 Identities=23% Similarity=0.317 Sum_probs=83.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccCh--hhHHHHHHHHhcCCCEEEEEcCCcccHHHHHhCC
Q 002310 731 HVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP--NEKKRFINELQNDENVVAMVGDGINDAAALASSH 808 (937)
Q Consensus 731 e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~P--e~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~Ad 808 (937)
..|+.|++.|+++.++|+.+...+..+.+.+|+. .+|....| +--..+++.++-....++|+||+.||.+|++.|+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag 118 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVG 118 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCC
Confidence 4799999999999999999999999999999997 66665543 3334444444333457999999999999999999
Q ss_pred eeEEeCCChHHHHhhcCEEEeCCC
Q 002310 809 IGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 809 VGIamg~gt~~a~~aADivL~~~~ 832 (937)
++++|+++.+..++.|+.|...++
T Consensus 119 ~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 119 LAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred CeEECcCchHHHHHhCCEEcCCCC
Confidence 999999999999999999886443
No 44
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.75 E-value=9.3e-08 Score=97.92 Aligned_cols=139 Identities=21% Similarity=0.258 Sum_probs=102.0
Q ss_pred CCCeEEEEEECCEEEEE-EEe---cCcCChhH---HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccCh
Q 002310 702 MNQSLVYVGVDNMLAGL-IYV---EDRIRDDA---AHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKP 774 (937)
Q Consensus 702 ~~~~~~~v~~~~~~lG~-i~l---~D~lr~~a---~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~P 774 (937)
.+...+.+..||+++.- +.+ ..++++-. ..+|+.|++.|+++.++||.....+..+++++|+. .+|.. .
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g--~ 94 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQG--Q 94 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecC--C
Confidence 35667777888887631 111 11122222 26899999999999999999999999999999997 56653 3
Q ss_pred hhHHHHHHHHh-cCC---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCC----ChhHHHHHHHHHH
Q 002310 775 NEKKRFINELQ-NDE---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGN----RLSQLLVALELSR 844 (937)
Q Consensus 775 e~K~~iV~~Lq-~~G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~----~l~~l~~~i~~~R 844 (937)
++|...++.+. +.| ..|+||||+.||.+|++.|.++++++.+.+..+..||+++-.+ .+..+.+.+...|
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 45766666543 333 4699999999999999999999999888888888999998532 2455555554443
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.71 E-value=7.2e-08 Score=101.47 Aligned_cols=131 Identities=21% Similarity=0.245 Sum_probs=100.2
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
.++...||+++. =..++.+.+.++|++|++.|+++.+.||-....+..+++++++...
T Consensus 3 ~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~ 79 (215)
T TIGR01487 3 LVAIDIDGTLTE---PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLA 79 (215)
T ss_pred EEEEecCCCcCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEe
Confidence 466677888774 1235889999999999999999999999999999999999997311
Q ss_pred ---------------------------------------------------e-e----EeccC--hhhHHHHHHHHhcC-
Q 002310 767 ---------------------------------------------------K-V----LSGVK--PNEKKRFINELQND- 787 (937)
Q Consensus 767 ---------------------------------------------------~-v----~ar~~--Pe~K~~iV~~Lq~~- 787 (937)
. + +..++ .-.|...++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 159 (215)
T TIGR01487 80 NMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELL 159 (215)
T ss_pred cccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHh
Confidence 0 0 00111 23555555555432
Q ss_pred C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHH
Q 002310 788 E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 788 G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
| ..++++||+.||.+|++.|+.|++|+++.+.+++.||+|..+++-..+.++
T Consensus 160 ~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 160 GIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred CCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 2 348999999999999999999999999999999999999976665555543
No 46
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.65 E-value=2e-07 Score=99.14 Aligned_cols=133 Identities=23% Similarity=0.285 Sum_probs=98.8
Q ss_pred eEEEEEECCEEEEEEEecC-cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------------e
Q 002310 705 SLVYVGVDNMLAGLIYVED-RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------K 767 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D-~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~----------------~ 767 (937)
..++...||+++- .| .+.+.+.++|++|++.|+++++.||-....+..+.+++|+... .
T Consensus 4 kli~~DlDGTLl~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~ 79 (230)
T PRK01158 4 KAIAIDIDGTITD----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKR 79 (230)
T ss_pred eEEEEecCCCcCC----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCE
Confidence 3566777888762 33 3789999999999999999999999999999999999997311 0
Q ss_pred -------------------------eEe------------------------------------------ccChh--hHH
Q 002310 768 -------------------------VLS------------------------------------------GVKPN--EKK 778 (937)
Q Consensus 768 -------------------------v~a------------------------------------------r~~Pe--~K~ 778 (937)
.+. ...|. .|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg 159 (230)
T PRK01158 80 IFLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKG 159 (230)
T ss_pred EEEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChH
Confidence 000 00010 022
Q ss_pred HHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 779 RFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 779 ~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.-++.+.+. ...++++||+.||.+|++.|++|+||+++.+..++.||+|..+++=..+.++++
T Consensus 160 ~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 160 TGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 222222111 124899999999999999999999999999999999999998877777777664
No 47
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.65 E-value=1.4e-07 Score=98.62 Aligned_cols=96 Identities=23% Similarity=0.258 Sum_probs=80.3
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--------------eeEec-cChhhHHHHHHHHhc-
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------KVLSG-VKPNEKKRFINELQN- 786 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--------------~v~ar-~~Pe~K~~iV~~Lq~- 786 (937)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|++.. .+... +..+.|...++.+.+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999531 12222 345789998866655
Q ss_pred CCC---EEEEEcCCcccHHHHHhCCeeEEeCCChH
Q 002310 787 DEN---VVAMVGDGINDAAALASSHIGVAMGGGVG 818 (937)
Q Consensus 787 ~G~---~VamvGDG~NDa~AL~~AdVGIamg~gt~ 818 (937)
.|. .+.++|||.||.|||+.|+.+|+++....
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH
Confidence 455 49999999999999999999999985433
No 48
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.63 E-value=2.1e-07 Score=97.08 Aligned_cols=116 Identities=19% Similarity=0.245 Sum_probs=91.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------e-eEec--cChhhHHHHHHHHhcCCCE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------K-VLSG--VKPNEKKRFINELQNDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~----------~-v~ar--~~Pe~K~~iV~~Lq~~G~~ 790 (937)
++.|++++.++.|+++ +++.++|+-....+..+.+++|+..- . +... ..|+.|...++.++..+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~ 146 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYR 146 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCe
Confidence 4689999999999999 99999999999999999999998520 0 1111 2578899999999988899
Q ss_pred EEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+.||||+.||.+|.++|++|+..+...+.....++..+. +++..+...+.
T Consensus 147 ~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~-~~~~el~~~l~ 196 (205)
T PRK13582 147 VIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV-HTYDELLAAID 196 (205)
T ss_pred EEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc-CCHHHHHHHHH
Confidence 999999999999999999999987654444445565322 45666655443
No 49
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.61 E-value=3.9e-07 Score=99.44 Aligned_cols=134 Identities=21% Similarity=0.314 Sum_probs=99.7
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--c----------------
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--D---------------- 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~---------------- 766 (937)
..+++..||+++.- ...+-+.++++|++|++.|+++++.||-....+..+.+++++.. .
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~ 80 (270)
T PRK10513 4 KLIAIDMDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADG 80 (270)
T ss_pred EEEEEecCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCC
Confidence 45667778888742 34688999999999999999999999999999999999998631 0
Q ss_pred ---------------------------------eeEec---------------------------------------cCh
Q 002310 767 ---------------------------------KVLSG---------------------------------------VKP 774 (937)
Q Consensus 767 ---------------------------------~v~ar---------------------------------------~~P 774 (937)
.++.. ..|
T Consensus 81 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (270)
T PRK10513 81 ETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEP 160 (270)
T ss_pred CEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCH
Confidence 01100 001
Q ss_pred hhHHHHHHHHhcC-----------------------------------C---CEEEEEcCCcccHHHHHhCCeeEEeCCC
Q 002310 775 NEKKRFINELQND-----------------------------------E---NVVAMVGDGINDAAALASSHIGVAMGGG 816 (937)
Q Consensus 775 e~K~~iV~~Lq~~-----------------------------------G---~~VamvGDG~NDa~AL~~AdVGIamg~g 816 (937)
++..++.+.+++. | ..|+++|||.||.+||+.|++||||+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA 240 (270)
T PRK10513 161 EILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNA 240 (270)
T ss_pred HHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCc
Confidence 1111122222210 1 2488999999999999999999999999
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 817 VGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 817 t~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.+..|+.||.|..+++=..+.++++
T Consensus 241 ~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 241 IPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred cHHHHHhcCeeccCCCcchHHHHHH
Confidence 9999999999998877777777664
No 50
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.60 E-value=5.3e-08 Score=95.72 Aligned_cols=91 Identities=27% Similarity=0.476 Sum_probs=79.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc-------------------ChhhHHHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV-------------------KPNEKKRFINEL 784 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~-------------------~Pe~K~~iV~~L 784 (937)
.+-|+++|.++.|++.|.+|+++||--..-+..+|.++||+..++||+. .-.-|.++|+.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 5678999999999999999999999999999999999999876677653 246899999999
Q ss_pred hcC--CCEEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 785 QND--ENVVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 785 q~~--G~~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
++. .+.++|||||.||.+|...||-=|+.+
T Consensus 168 rk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 168 RKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HhCCChheeEEecCCccccccCCchhhhhccC
Confidence 884 358999999999999999977666664
No 51
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.54 E-value=5.8e-07 Score=97.72 Aligned_cols=135 Identities=21% Similarity=0.251 Sum_probs=102.0
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc------------------
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------ 766 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------ 766 (937)
..+++..||+++. =..++.+.++++|+++++.|+++.+.||-....+..+.+++++...
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~ 80 (264)
T COG0561 4 KLLAFDLDGTLLD---SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQ 80 (264)
T ss_pred eEEEEcCCCCccC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEee
Confidence 4566667777643 1223899999999999999999999999999999999999998320
Q ss_pred -----------------------ee-----------------------------------------EeccChh-------
Q 002310 767 -----------------------KV-----------------------------------------LSGVKPN------- 775 (937)
Q Consensus 767 -----------------------~v-----------------------------------------~ar~~Pe------- 775 (937)
.+ .....++
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T COG0561 81 KPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVE 160 (264)
T ss_pred ecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHH
Confidence 00 0011112
Q ss_pred ----------------------------hHHHHHHHHhc-CCC---EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhh
Q 002310 776 ----------------------------EKKRFINELQN-DEN---VVAMVGDGINDAAALASSHIGVAMGGGVGAASEV 823 (937)
Q Consensus 776 ----------------------------~K~~iV~~Lq~-~G~---~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~a 823 (937)
+|..-++.|.+ .|- .|+++||+.||.+||+.|..||||+++.+.+++.
T Consensus 161 ~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~ 240 (264)
T COG0561 161 ALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKEL 240 (264)
T ss_pred HHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhh
Confidence 23333333322 232 3999999999999999999999999999999999
Q ss_pred cCEEEeCCChhHHHHHHHH
Q 002310 824 ASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 824 ADivL~~~~l~~l~~~i~~ 842 (937)
||++...++=..|..+++.
T Consensus 241 A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 241 ADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred CCcccCCccchHHHHHHHH
Confidence 9988888888888877763
No 52
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.54 E-value=4.2e-07 Score=99.34 Aligned_cols=133 Identities=16% Similarity=0.185 Sum_probs=97.2
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
.+++..||+++. -...+.+.++++|++|++.|+++.+.||-....+..+.+++|++..
T Consensus 4 li~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~ 80 (272)
T PRK15126 4 LAAFDMDGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHR 80 (272)
T ss_pred EEEEeCCCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEe
Confidence 566677888864 2336899999999999999999999999999999999999997310
Q ss_pred ----------------------------eeEec------------------------------------cChhhHHHHHH
Q 002310 767 ----------------------------KVLSG------------------------------------VKPNEKKRFIN 782 (937)
Q Consensus 767 ----------------------------~v~ar------------------------------------~~Pe~K~~iV~ 782 (937)
..+.. ..|++-.++.+
T Consensus 81 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~ 160 (272)
T PRK15126 81 QDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQI 160 (272)
T ss_pred ecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHH
Confidence 00000 01111111222
Q ss_pred HHhcC-----------------------------------C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhc
Q 002310 783 ELQND-----------------------------------E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVA 824 (937)
Q Consensus 783 ~Lq~~-----------------------------------G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aA 824 (937)
.+++. | ..|+++|||.||.+||+.|+.||||+++.+.+|+.|
T Consensus 161 ~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A 240 (272)
T PRK15126 161 QLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAEL 240 (272)
T ss_pred HHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhC
Confidence 22210 1 248899999999999999999999999999999999
Q ss_pred CE--EEeCCChhHHHHHHH
Q 002310 825 SV--VLMGNRLSQLLVALE 841 (937)
Q Consensus 825 Di--vL~~~~l~~l~~~i~ 841 (937)
|. |..+++=..+.++++
T Consensus 241 ~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 241 PHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred CCCeecCCCcchHHHHHHH
Confidence 85 666677677776664
No 53
>PRK10976 putative hydrolase; Provisional
Probab=98.51 E-value=7.3e-07 Score=97.06 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=97.3
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------- 766 (937)
.+++..||+++- -...+.+.+.++|+++++.|+++.+.||-....+..+.+++|++..
T Consensus 4 li~~DlDGTLl~---~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~ 80 (266)
T PRK10976 4 VVASDLDGTLLS---PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFS 80 (266)
T ss_pred EEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehh
Confidence 566777888763 1335889999999999999999999999999999999999997210
Q ss_pred -----------------------------eeEe-cc------------------------------------ChhhHHHH
Q 002310 767 -----------------------------KVLS-GV------------------------------------KPNEKKRF 780 (937)
Q Consensus 767 -----------------------------~v~a-r~------------------------------------~Pe~K~~i 780 (937)
.++. +. .+++..++
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~ 160 (266)
T PRK10976 81 HNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPL 160 (266)
T ss_pred hcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHH
Confidence 0010 00 01111112
Q ss_pred HHHHhcC-----------------------------------C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHh
Q 002310 781 INELQND-----------------------------------E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASE 822 (937)
Q Consensus 781 V~~Lq~~-----------------------------------G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~ 822 (937)
.+.+++. | ..|+++||+.||.+||+.|+.||||+++.+..|+
T Consensus 161 ~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~ 240 (266)
T PRK10976 161 EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKD 240 (266)
T ss_pred HHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHH
Confidence 2223210 1 2488999999999999999999999999999999
Q ss_pred hcC--EEEeCCChhHHHHHHH
Q 002310 823 VAS--VVLMGNRLSQLLVALE 841 (937)
Q Consensus 823 aAD--ivL~~~~l~~l~~~i~ 841 (937)
.|| .|..+++=..+..+++
T Consensus 241 ~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 241 LLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred hCCCCeecccCchHHHHHHHH
Confidence 987 6766777777776664
No 54
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.51 E-value=4.2e-07 Score=94.29 Aligned_cols=100 Identities=24% Similarity=0.281 Sum_probs=80.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----------------cChhhHHHHHHHHhc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------------VKPNEKKRFINELQN 786 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----------------~~Pe~K~~iV~~Lq~ 786 (937)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+. .+++. ..|..|.++++.+.+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 58999999999999999999999999999999999999986 33321 234567777776644
Q ss_pred C----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcC
Q 002310 787 D----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS 825 (937)
Q Consensus 787 ~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aAD 825 (937)
+ ...+.|+||+.||.+|++.|+++++++.+....+.++|
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 3 34599999999999999999999999865555555554
No 55
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.49 E-value=6.6e-07 Score=94.69 Aligned_cols=124 Identities=22% Similarity=0.279 Sum_probs=92.9
Q ss_pred EEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------------------
Q 002310 709 VGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------------------- 766 (937)
Q Consensus 709 v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---------------------- 766 (937)
+..||+++- =...+.+.+.++|++|++.|+++++.||-+...+..+.+++|+...
T Consensus 3 ~DlDGTLl~---~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~ 79 (225)
T TIGR01482 3 SDIDGTLTD---PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAY 79 (225)
T ss_pred EeccCccCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecc
Confidence 345666652 1224788999999999999999999999999999999999995210
Q ss_pred ---------------------------------------------------ee-------EeccCh--hhHHHHHHHHhc
Q 002310 767 ---------------------------------------------------KV-------LSGVKP--NEKKRFINELQN 786 (937)
Q Consensus 767 ---------------------------------------------------~v-------~ar~~P--e~K~~iV~~Lq~ 786 (937)
.+ +....| -.|..-++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~ 159 (225)
T TIGR01482 80 LEEEWFLDIVIAKTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKE 159 (225)
T ss_pred cCHHHHHHHHHhcccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHH
Confidence 00 001112 245444544433
Q ss_pred C-C---CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhH
Q 002310 787 D-E---NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQ 835 (937)
Q Consensus 787 ~-G---~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~ 835 (937)
. | ..|+++||+.||.+|++.|++|+||+++.+..++.||.|..+++-..
T Consensus 160 ~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 160 KLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCc
Confidence 2 2 45899999999999999999999999999999999999987766666
No 56
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.47 E-value=3.5e-07 Score=87.29 Aligned_cols=116 Identities=20% Similarity=0.226 Sum_probs=97.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhC
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~A 807 (937)
.|+.|.++||+|.++||-+...++.=|+++||. .+|-. -++|....+.|.++ -.-|+++||..||-|++++.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG--~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~v 118 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQG--ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKV 118 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeec--hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHc
Confidence 689999999999999999999999999999997 67744 45898888877654 34699999999999999999
Q ss_pred CeeEEeCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHH
Q 002310 808 HIGVAMGGGVGAASEVASVVLMGNR----LSQLLVALELSRLTMKTVK 851 (937)
Q Consensus 808 dVGIamg~gt~~a~~aADivL~~~~----l~~l~~~i~~~R~~~~~i~ 851 (937)
..+++..++....++.||+|+..+. ++.+.++|..++..+....
T Consensus 119 Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 119 GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred CCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 9999999999999999999987643 6677777777776655443
No 57
>PLN02954 phosphoserine phosphatase
Probab=98.44 E-value=1.6e-06 Score=91.79 Aligned_cols=114 Identities=22% Similarity=0.430 Sum_probs=86.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-------------------cChhhHHHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-------------------VKPNEKKRFINEL 784 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-------------------~~Pe~K~~iV~~L 784 (937)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+....+|+. .....|.+.++.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 478999999999999999999999999999999999999974345431 0123588888877
Q ss_pred hcC--CCEEEEEcCCcccHHHHHh--CCeeEEeCCC--hHHHHhhcCEEEeCCChhHHHHH
Q 002310 785 QND--ENVVAMVGDGINDAAALAS--SHIGVAMGGG--VGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 785 q~~--G~~VamvGDG~NDa~AL~~--AdVGIamg~g--t~~a~~aADivL~~~~l~~l~~~ 839 (937)
+++ ...+.|+||+.||..|.++ ++++++.+.. .+.....+|.++ +++..+...
T Consensus 164 ~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 222 (224)
T PLN02954 164 KKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIEV 222 (224)
T ss_pred HHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHHh
Confidence 654 2568999999999999777 5777776632 233445689887 456666554
No 58
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.41 E-value=2.9e-06 Score=92.61 Aligned_cols=52 Identities=29% Similarity=0.379 Sum_probs=46.9
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|+++||+.||.+|++.|++|++||++.+..++.||.|..+++=..+..+++
T Consensus 217 e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 217 NVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 4889999999999999999999999888888999999998888777777764
No 59
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.38 E-value=2e-06 Score=90.39 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=86.7
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec-----------cCh------------hhHHH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG-----------VKP------------NEKKR 779 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar-----------~~P------------e~K~~ 779 (937)
-+++|++.+.++.|++.|+++.++||........+.+.++.. ..+++. ..| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 479999999999999999999999999999999999887543 244331 113 35899
Q ss_pred HHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 780 FINELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 780 iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
+++.++.....+.|||||.||..|++.||+.++-+.-.+-.++.---...-++|..+...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 99999888888999999999999999999987754222212221111222256777766553
No 60
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.36 E-value=8.3e-07 Score=91.29 Aligned_cols=79 Identities=32% Similarity=0.477 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-------------ccChh-h--HHHHHHHH------
Q 002310 727 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-------------GVKPN-E--KKRFINEL------ 784 (937)
Q Consensus 727 ~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-------------r~~Pe-~--K~~iV~~L------ 784 (937)
+++.+.|+.++++|++++++||+....++.+++.+|++...+++ +.+|. + |.+.++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 77779999999999999999999999999999999998543332 33333 3 99999999
Q ss_pred hcCCCEEEEEcCCcccHHHHH
Q 002310 785 QNDENVVAMVGDGINDAAALA 805 (937)
Q Consensus 785 q~~G~~VamvGDG~NDa~AL~ 805 (937)
+.....+.++|||.||.||||
T Consensus 172 ~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCeEEEEECCHHHHHHhC
Confidence 445789999999999999986
No 61
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.35 E-value=3e-06 Score=90.64 Aligned_cols=119 Identities=22% Similarity=0.276 Sum_probs=92.7
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-----------------------------------
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD----------------------------------- 766 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~----------------------------------- 766 (937)
...+.+.+.+++++|+++|+++.+.||-....+..+.+++++...
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 446789999999999999999999999999999999999997310
Q ss_pred --------------------------------------------------eeEec-------------------------
Q 002310 767 --------------------------------------------------KVLSG------------------------- 771 (937)
Q Consensus 767 --------------------------------------------------~v~ar------------------------- 771 (937)
.+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 11111
Q ss_pred -------cCh--hhHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHH
Q 002310 772 -------VKP--NEKKRFINELQND----ENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 772 -------~~P--e~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~ 838 (937)
++| -.|..-++.|.+. ...+.++||+.||.+||+.|+.||||+++++..++.||.+....+=..+.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 122 3566655555431 246899999999999999999999999999999999999998654466665
Q ss_pred HH
Q 002310 839 AL 840 (937)
Q Consensus 839 ~i 840 (937)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 43
No 62
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.30 E-value=2.6e-06 Score=92.18 Aligned_cols=50 Identities=32% Similarity=0.393 Sum_probs=44.1
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
.++++||+.||.+|++.|+.|++|+++.+..++.||+++.+++=..+..+
T Consensus 206 ~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 206 DVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred HEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 48899999999999999999999999999999999999987766655543
No 63
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.29 E-value=3.1e-06 Score=89.31 Aligned_cols=114 Identities=19% Similarity=0.258 Sum_probs=85.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec---c--------C--h----------hhHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG---V--------K--P----------NEKKRF 780 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar---~--------~--P----------e~K~~i 780 (937)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+ +..+.+++. . . | ..|..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 68999999999999999999999999999999999998 754445532 1 1 1 248899
Q ss_pred HHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhh--cCEEEeCCChhHHHHHH
Q 002310 781 INELQNDENVVAMVGDGINDAAALASSHIGVAMGGGVGAASEV--ASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 781 V~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~a--ADivL~~~~l~~l~~~i 840 (937)
++.++.....+.|||||.||..|.++||+.++-+.-.+.+++. +.+.+ ++|..+...+
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 9999888788999999999999999999977743111222222 33322 5677766554
No 64
>PLN02887 hydrolase family protein
Probab=98.28 E-value=6.8e-06 Score=97.75 Aligned_cols=52 Identities=29% Similarity=0.408 Sum_probs=47.7
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
.|+++|||.||.+||+.|+.||||+++.+..|+.||+|..+++=..|..+++
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888777877765
No 65
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.18 E-value=5.1e-06 Score=85.09 Aligned_cols=90 Identities=20% Similarity=0.268 Sum_probs=75.1
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEec-----------cCh------------hhH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSG-----------VKP------------NEK 777 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~ar-----------~~P------------e~K 777 (937)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+... .+++. ..| ..|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 47899999999999999999999999999999999999998531 23321 111 259
Q ss_pred HHHHHHHhcC-CCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 778 KRFINELQND-ENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 778 ~~iV~~Lq~~-G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999887 8899999999999999999987554
No 66
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.18 E-value=3.5e-06 Score=85.48 Aligned_cols=82 Identities=27% Similarity=0.383 Sum_probs=68.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-------------------ccChhhHHHHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-------------------GVKPNEKKRFINEL 784 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-------------------r~~Pe~K~~iV~~L 784 (937)
+++|++.+.++.|++.|++++++||.....+..+++.+|+.. +++ ...++.|..+++.+
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD--VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch--heeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 368999999999999999999999999999999999999862 221 23457899999887
Q ss_pred hcC----CCEEEEEcCCcccHHHHHhC
Q 002310 785 QND----ENVVAMVGDGINDAAALASS 807 (937)
Q Consensus 785 q~~----G~~VamvGDG~NDa~AL~~A 807 (937)
+++ ...+.|+|||.||.+|++.|
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 654 34699999999999999875
No 67
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.13 E-value=8.2e-06 Score=84.81 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=76.6
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec------------------cChhhHHHHHH
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG------------------VKPNEKKRFIN 782 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar------------------~~Pe~K~~iV~ 782 (937)
+..++++++.+.++.+++.|++++++|+-....+..+++.+|++ .+++. +.++.|.+.++
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~ 161 (202)
T TIGR01490 84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALA 161 (202)
T ss_pred HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccCCCCCChHHHHHHH
Confidence 34579999999999999999999999999999999999999996 23221 23467888887
Q ss_pred HHhc-CCC---EEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 783 ELQN-DEN---VVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 783 ~Lq~-~G~---~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
.+.+ .+. .+.++||+.||.|+++.|+.++++.
T Consensus 162 ~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 162 ELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 7644 342 6899999999999999999999886
No 68
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.07 E-value=2.3e-05 Score=82.82 Aligned_cols=119 Identities=21% Similarity=0.264 Sum_probs=89.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccCh--hhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKP--NEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~P--e~K~~iV~~Lq~~G~~Vam 793 (937)
.++.|++.+.++.|++.|+++.++|+........+.+..|+.. +.+++ +..| +--..+++.++.....+.|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 4689999999999999999999999999999999999999853 12222 1233 2224455556555678999
Q ss_pred EcCCcccHHHHHhCCe-eEEeCC----ChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 794 VGDGINDAAALASSHI-GVAMGG----GVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIamg~----gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
+||+.||..+.++|++ +|.+.. ..+.....+|.++ +++..+...+..+
T Consensus 172 igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 9999999999999998 666532 2344455688777 6788888877543
No 69
>PRK08238 hypothetical protein; Validated
Probab=97.99 E-value=0.00023 Score=83.35 Aligned_cols=96 Identities=16% Similarity=0.242 Sum_probs=77.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-----ccChhhHHHHHHHHhcCCCEEEEEcCCc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-----GVKPNEKKRFINELQNDENVVAMVGDGI 798 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-----r~~Pe~K~~iV~~Lq~~G~~VamvGDG~ 798 (937)
|++|++.+.+++++++|+++.++|+=.+..++.+++.+|+.. .+.+ +..|+.|.+.+++...++ .+.|+||..
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-~Vigsd~~~~~kg~~K~~~l~~~l~~~-~~~yvGDS~ 149 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-GVFASDGTTNLKGAAKAAALVEAFGER-GFDYAGNSA 149 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-EEEeCCCccccCCchHHHHHHHHhCcc-CeeEecCCH
Confidence 588999999999999999999999999999999999999832 3432 356778877665433222 257899999
Q ss_pred ccHHHHHhCCeeEEeCCChHHHH
Q 002310 799 NDAAALASSHIGVAMGGGVGAAS 821 (937)
Q Consensus 799 NDa~AL~~AdVGIamg~gt~~a~ 821 (937)
||.|+++.|+-.++++.+....+
T Consensus 150 ~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 150 ADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred HHHHHHHhCCCeEEECCCHHHHH
Confidence 99999999999999986554443
No 70
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.98 E-value=5.5e-05 Score=82.70 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=48.4
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
.++++..||+++.- .+.+.+++.++|++|++.|++++++||-....+..+.+++|+.
T Consensus 5 kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 5 LLVFTDLDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred eEEEEcCcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 46677778887641 3457788999999999999999999999999999999999973
No 71
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.98 E-value=5.7e-05 Score=79.78 Aligned_cols=118 Identities=23% Similarity=0.347 Sum_probs=91.1
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEe-cc------ChhhHHHHHHHHhcCCCEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-GV------KPNEKKRFINELQNDENVVA 792 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~a-r~------~Pe~K~~iV~~Lq~~G~~Va 792 (937)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+..- .+++ .- .|+.....++.+....+.++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 456789999999999999999999999999999999999999632 2333 22 34455555566655534799
Q ss_pred EEcCCcccHHHHHhCC---eeEEeCC--ChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 793 MVGDGINDAAALASSH---IGVAMGG--GVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 793 mvGDG~NDa~AL~~Ad---VGIamg~--gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
||||..||..|-++|+ ||+..|. ........+|.++ +++..|...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999998 6677763 4567777799988 56777766543
No 72
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.95 E-value=7.5e-05 Score=81.56 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=50.0
Q ss_pred CCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 702 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 702 ~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
+....++...||+++- =...+-+.++++|++|++.|+++++.||-....+..+.+++|++
T Consensus 5 ~~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 5 QDPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 3556788888999863 12345578999999999999999999999999999999999873
No 73
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.91 E-value=4.5e-05 Score=72.86 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=71.5
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CceeEe-----------------------ccChh
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLS-----------------------GVKPN 775 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~~~v~a-----------------------r~~Pe 775 (937)
...++.+++.+.+++|++.|++++++||.....+..+.+++|+. .+.+++ +-.|+
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34589999999999999999999999999999999999999972 222332 23444
Q ss_pred hHHHHHHHHhcCCCEEEEEcCCcccHHHHHh-CCeeEE
Q 002310 776 EKKRFINELQNDENVVAMVGDGINDAAALAS-SHIGVA 812 (937)
Q Consensus 776 ~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~-AdVGIa 812 (937)
.+..+.+.++.....+.++||+.||..|++. ..-+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5555555555556789999999999999998 555544
No 74
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.87 E-value=0.0001 Score=76.93 Aligned_cols=115 Identities=18% Similarity=0.297 Sum_probs=84.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+.....+..+-+..|+.. +.+++. ..| +-=..+++.++-....++||
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~i 154 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMV 154 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEE
Confidence 788999999999999999999999999999999999999953 233321 223 22234444444445679999
Q ss_pred cCCcccHHHHHhCCeeEE-e--C--CChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGVA-M--G--GGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIa-m--g--~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
||+.+|..+-++|++-.. + | ...+...+.+|+++ +++..|..++
T Consensus 155 gD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 155 GDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred cCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 999999999999998643 2 3 33345566789886 5676666544
No 75
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.78 E-value=3.7e-05 Score=91.99 Aligned_cols=71 Identities=30% Similarity=0.416 Sum_probs=66.9
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccCC
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDMG 205 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 205 (937)
+-.++|.||+|.+|+..+|+.|++++||.++.|.+..+++.+.|||...+. +.+.+.++++||.+++.+..
T Consensus 70 ~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~--------~~~~e~ie~~gf~a~~i~~~ 140 (951)
T KOG0207|consen 70 KCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSP--------DSIAESIEDLGFSAELIESV 140 (951)
T ss_pred eeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCc--------hhHHHHHHhcCccceehhcc
Confidence 678999999999999999999999999999999999999999999999987 89999999999999876654
No 76
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.70 E-value=0.00029 Score=76.96 Aligned_cols=117 Identities=18% Similarity=0.244 Sum_probs=83.0
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-ccChhhH------HHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-GVKPNEK------KRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r~~Pe~K------~~iV~~Lq~~G~~Vam 793 (937)
.++.|++.++++.|++.|+++.++|+-....+..+.++.|+.. +.+++ ...+..| ..+.+.+.-....+.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 4789999999999999999999999999999999999999853 12332 2223223 2233333323457999
Q ss_pred EcCCcccHHHHHhCCe-eEEe--C--CChHHHHhhcCEEEeCCChhHHHHHHH
Q 002310 794 VGDGINDAAALASSHI-GVAM--G--GGVGAASEVASVVLMGNRLSQLLVALE 841 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIam--g--~gt~~a~~aADivL~~~~l~~l~~~i~ 841 (937)
|||+.||..+.++|++ .+++ | ...+.....+|.++ +++..+..++.
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999997 3444 3 22334455788887 56777765533
No 77
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.70 E-value=0.00032 Score=75.90 Aligned_cols=52 Identities=21% Similarity=0.123 Sum_probs=43.1
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCCh---HHHHhh--c-CEEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGV---GAASEV--A-SVVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt---~~a~~a--A-DivL~~~~l~~l~~~i~ 841 (937)
.|.++||+.||.+||+.|+.||||+++. +..++. | +.|..+++-..+.++++
T Consensus 196 ~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 196 KVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred eEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 4899999999999999999999999887 467776 4 47777777777777665
No 78
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.67 E-value=0.0002 Score=76.47 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=44.5
Q ss_pred EEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcC----EEEeCCChhHHHHHHH
Q 002310 790 VVAMVGDGINDAAALASSHIGVAMGGGVGAASEVAS----VVLMGNRLSQLLVALE 841 (937)
Q Consensus 790 ~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aAD----ivL~~~~l~~l~~~i~ 841 (937)
.|+++||+.||.+|++.++.||+|+++.+..++.|| +|...++=..+.++|+
T Consensus 177 ~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 177 QILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred HEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 488999999999999999999999999999999999 6665666566766664
No 79
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.67 E-value=0.00027 Score=74.16 Aligned_cols=115 Identities=20% Similarity=0.258 Sum_probs=82.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c----cC--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VK--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r----~~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+.. +.+++ . .. |+--.++++.++-....+.||
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 161 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMV 161 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEE
Confidence 478999999999999999999999999999999999999963 12222 1 12 333344455554445679999
Q ss_pred cCCcccHHHHHhCCeeE---EeCC-C-hHHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGV---AMGG-G-VGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGI---amg~-g-t~~a~~aADivL~~~~l~~l~~~i 840 (937)
||..+|..|-++|++-. .-|. . .+.....+|.++ +++..+...+
T Consensus 162 GDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 162 GDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 99999999999999843 2232 2 223345688775 4677776654
No 80
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.53 E-value=0.00014 Score=91.90 Aligned_cols=64 Identities=34% Similarity=0.583 Sum_probs=54.0
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLR 202 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~ 202 (937)
.++++.|+||+|++|+.+||++|++++||.+++||+. +..+..+ .++ +.+.++++++||++...
T Consensus 3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~---~~~--------~~i~~~i~~~Gy~~~~~ 66 (834)
T PRK10671 3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGT---ASA--------EALIETIKQAGYDASVS 66 (834)
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEec---CCH--------HHHHHHHHhcCCccccc
Confidence 4689999999999999999999999999999999995 4555443 233 78999999999998753
No 81
>TIGR00003 copper ion binding protein. This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.
Probab=97.53 E-value=0.00041 Score=56.01 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=55.0
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
+..+.|.||+|.+|+..+++.++..+++..+.+++..+++.+.|++..... ..+...+++.||.+
T Consensus 3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~ 67 (68)
T TIGR00003 3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATE--------ICIAEAILDAGYEV 67 (68)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCH--------HHHHHHHHHcCCCc
Confidence 457899999999999999999999999999999999999999998654443 55666678888854
No 82
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.48 E-value=0.0006 Score=71.32 Aligned_cols=113 Identities=17% Similarity=0.212 Sum_probs=79.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChh--hHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPN--EKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe--~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+-....+..+.+..|+.. +.+++. ..|+ -=....+.+.-....++||
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 164 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYV 164 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEe
Confidence 688999999999999999999999999999999999999842 123332 2232 1123333333334569999
Q ss_pred cCCcccHHHHHhCCeeEEe---CCC--hHHHHhhcCEEEeCCChhHHHH
Q 002310 795 GDGINDAAALASSHIGVAM---GGG--VGAASEVASVVLMGNRLSQLLV 838 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam---g~g--t~~a~~aADivL~~~~l~~l~~ 838 (937)
||..||..|.++|++-... |.+ .......+|.++ +++..+..
T Consensus 165 gDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 165 GDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred CCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 9999999999999986543 322 223334688776 45666554
No 83
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.43 E-value=0.0013 Score=71.04 Aligned_cols=118 Identities=18% Similarity=0.251 Sum_probs=83.2
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CceeEecc-----------C--h----hhHHHHHHH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLSGV-----------K--P----NEKKRFINE 783 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~~~v~ar~-----------~--P----e~K~~iV~~ 783 (937)
-++||++.+.++.|++.|+++.++||-....+..+.++.|+. ...++|+. . | ..|.+.+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 478999999999999999999999999999999999999983 22332110 1 2 346554432
Q ss_pred -----Hh--cCCCEEEEEcCCcccHHHHHhC---CeeEEeC---CC----hHHHHhhcCEEEeCCChhHHHHHH
Q 002310 784 -----LQ--NDENVVAMVGDGINDAAALASS---HIGVAMG---GG----VGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 784 -----Lq--~~G~~VamvGDG~NDa~AL~~A---dVGIamg---~g----t~~a~~aADivL~~~~l~~l~~~i 840 (937)
++ .....|.|+|||.||..|..-. +-=|.+| .- -+.-+++-||||.+|.=-.++..|
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHH
Confidence 22 2345799999999999996544 2234444 22 234566889999998765566554
No 84
>PLN02957 copper, zinc superoxide dismutase
Probab=97.43 E-value=0.0004 Score=74.03 Aligned_cols=68 Identities=29% Similarity=0.403 Sum_probs=58.7
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
+.++.+.+ +|+|.+|+..|++.|++++||..+.+|+..+++.|.++. .. +.+.+++++.||.+.+...
T Consensus 5 ~~~~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~---~~--------~~I~~aIe~~Gy~a~~~~~ 72 (238)
T PLN02957 5 ELLTEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSS---PV--------KAMTAALEQTGRKARLIGQ 72 (238)
T ss_pred cEEEEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecC---CH--------HHHHHHHHHcCCcEEEecC
Confidence 45677888 799999999999999999999999999999999998832 22 6788999999999876654
No 85
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.41 E-value=0.00099 Score=71.79 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=45.6
Q ss_pred EEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 707 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 707 ~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
++...|++|+.---=..+..|...++++++++.|+.+++.||-.....+.+.+++++
T Consensus 4 i~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 4 LVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred EEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 444567777621111456779999999999999999999999999999999998886
No 86
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.35 E-value=0.0012 Score=71.90 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=47.3
Q ss_pred CCeEEEEEECCEEEEEEEe--cCcCChhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 703 NQSLVYVGVDNMLAGLIYV--EDRIRDDAAHVVNSLSS-QGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l--~D~lr~~a~e~I~~L~~-aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
....+++..||+|+-...= .-.+-++++++|+.|++ .|+.++++||-.......+.+.+++
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF 76 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc
Confidence 3467888899998742110 11456899999999998 7999999999999999888876664
No 87
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.30 E-value=0.0021 Score=70.06 Aligned_cols=114 Identities=19% Similarity=0.194 Sum_probs=80.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeE-eccChhhHHHHHH-HHhc---CCCEEEEEcC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVL-SGVKPNEKKRFIN-ELQN---DENVVAMVGD 796 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~-ar~~Pe~K~~iV~-~Lq~---~G~~VamvGD 796 (937)
++.|++.++++.|++.|+++.++|+.+...+..+-+..|+.+. .+. +...+ .|.+.++ .+++ ....++||||
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 5789999999999999999999999999999999999998532 122 22211 1333332 3333 3456999999
Q ss_pred CcccHHHHHhCCeeEEe---CCChH--HHHhhcCEEEeCCChhHHHHHH
Q 002310 797 GINDAAALASSHIGVAM---GGGVG--AASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 797 G~NDa~AL~~AdVGIam---g~gt~--~a~~aADivL~~~~l~~l~~~i 840 (937)
..+|..|-++|++-... |.... .....+|+++ +++..|...+
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 99999999999886432 22222 3334689887 5688777654
No 88
>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]
Probab=97.30 E-value=0.00063 Score=67.64 Aligned_cols=69 Identities=26% Similarity=0.383 Sum_probs=58.0
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
...++|.| -|+|.+|+..|++.|+.++||.+++|++....+.|..... . .++.+.|+..|-++.++..
T Consensus 6 ~~~~efaV-~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p---~--------s~i~~~le~tGr~Avl~G~ 73 (247)
T KOG4656|consen 6 TYEAEFAV-QMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVP---P--------SEIQNTLENTGRDAVLRGA 73 (247)
T ss_pred ceeEEEEE-echhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCC---h--------HHHHHHHHhhChheEEecC
Confidence 34577777 4999999999999999999999999999999999974322 1 7899999999998887665
Q ss_pred C
Q 002310 205 G 205 (937)
Q Consensus 205 ~ 205 (937)
.
T Consensus 74 G 74 (247)
T KOG4656|consen 74 G 74 (247)
T ss_pred C
Confidence 3
No 89
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.27 E-value=0.0012 Score=69.87 Aligned_cols=112 Identities=16% Similarity=0.187 Sum_probs=78.9
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChhhHHHHHHHHhcCC---CEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNEKKRFINELQNDE---NVVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe~K~~iV~~Lq~~G---~~Va 792 (937)
-++.|++.++++.|++.|+++.++|+........+.++.||.. +.+++. ..|+-. -+.+.+++.| ..+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPE-VYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHH-HHHHHHHHcCCCHHHeE
Confidence 4688999999999999999999999999999999999999853 122221 223222 2333444443 5689
Q ss_pred EEcCCcccHHHHHhCCeeEEeC-C---ChHHHHhhcCEEEeCCChhHHH
Q 002310 793 MVGDGINDAAALASSHIGVAMG-G---GVGAASEVASVVLMGNRLSQLL 837 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVGIamg-~---gt~~a~~aADivL~~~~l~~l~ 837 (937)
||||..||..+.++|++....- . ..+.-...+|.++ .++..+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 9999999999999999875442 2 2222233577766 4566554
No 90
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.10 E-value=0.0037 Score=66.22 Aligned_cols=53 Identities=17% Similarity=0.336 Sum_probs=44.6
Q ss_pred EEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 707 VYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 707 ~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+++..||+++- .+..-+++.++|++|++.|++++++||-....+..+.+++|+
T Consensus 2 i~~DlDGTLl~----~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 2 IFTDLDGTLLP----PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred EEEeCCCCCcC----CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 34556777653 456667899999999999999999999999999999999997
No 91
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.07 E-value=0.0032 Score=66.96 Aligned_cols=115 Identities=15% Similarity=0.118 Sum_probs=81.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEe-c----cC--hhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLS-G----VK--PNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~a-r----~~--Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+... .+.+ . .. |+-=..+++.+.-....+.||
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV 174 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe
Confidence 5789999999999999999999999999998888899998531 2222 1 12 222344555555556679999
Q ss_pred cCCcccHHHHHhCCeeE-Ee--CCC--h-HHHHhhcCEEEeCCChhHHHHHH
Q 002310 795 GDGINDAAALASSHIGV-AM--GGG--V-GAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGI-am--g~g--t-~~a~~aADivL~~~~l~~l~~~i 840 (937)
||..||..|-++|++-. ++ |.. . ......+|+++ +++..|...+
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 99999999999998764 33 221 1 12234588887 4566665443
No 92
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.06 E-value=0.004 Score=65.58 Aligned_cols=115 Identities=23% Similarity=0.255 Sum_probs=80.5
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--C--ceeEec-----cChhhH--HHHHHHHhcC-CCE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--K--DKVLSG-----VKPNEK--KRFINELQND-ENV 790 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~--~~v~ar-----~~Pe~K--~~iV~~Lq~~-G~~ 790 (937)
.++.||+.+.++.|++.|+++.++|+-.......+.+..|+. . +.+++. -.|+.. ....+.+.-. ...
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 479999999999999999999999999999999999999986 2 233332 224222 2223333222 257
Q ss_pred EEEEcCCcccHHHHHhCCeeE--EeCCCh----HHHHhhcCEEEeCCChhHHHHH
Q 002310 791 VAMVGDGINDAAALASSHIGV--AMGGGV----GAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGI--amg~gt----~~a~~aADivL~~~~l~~l~~~ 839 (937)
+.||||+.+|..|-++|++.. ++..|. ......+|.++ +++..+..+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 999999999999999999986 332222 12223467666 457666554
No 93
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.04 E-value=0.0019 Score=66.82 Aligned_cols=86 Identities=17% Similarity=0.166 Sum_probs=66.2
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--ee------EeccChhhHHHHHHHHhcCCCEEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KV------LSGVKPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v------~ar~~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..- .+ ..+-.|+--..+++.+.-....+.|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 455677789999999999999999999999999999999998521 11 1122344445566666555667999
Q ss_pred EcCCcccHHHHHhC
Q 002310 794 VGDGINDAAALASS 807 (937)
Q Consensus 794 vGDG~NDa~AL~~A 807 (937)
|||..+|+.|-++|
T Consensus 184 vGD~~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDTVDDIITGRKA 197 (197)
T ss_pred EeCCHHHHHHHHhC
Confidence 99999999887765
No 94
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.04 E-value=0.0049 Score=67.14 Aligned_cols=85 Identities=14% Similarity=0.155 Sum_probs=63.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEec-c----ChhhHHHHHHHHhcCC----CEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-V----KPNEKKRFINELQNDE----NVV 791 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar-~----~Pe~K~~iV~~Lq~~G----~~V 791 (937)
++-|++.++++.|++.|+++.++|+.....+..+-+..|+.. +.+++. - .|+ ..-+.+.+++.| ..+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~-p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY-PWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCC-hHHHHHHHHHcCCCCCcce
Confidence 567999999999999999999999999998888877766532 233322 1 232 122334444433 469
Q ss_pred EEEcCCcccHHHHHhCCe
Q 002310 792 AMVGDGINDAAALASSHI 809 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdV 809 (937)
.||||..+|..|-+.|++
T Consensus 180 l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred EEEcCcHHHHHHHHHCCC
Confidence 999999999999999987
No 95
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.02 E-value=0.0023 Score=68.01 Aligned_cols=83 Identities=20% Similarity=0.374 Sum_probs=64.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCC--C--ceeEeccCh--hhHHHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD----KKNSAEYVASLVGIP--K--DKVLSGVKP--NEKKRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD----~~~tA~~iA~~~GI~--~--~~v~ar~~P--e~K~~iV~~Lq~~G~~Vam 793 (937)
.+.+++++.++.|++.|+++.++|+- ...|+..+.+..|++ . ..+++.-++ .+|... +++.| .+.|
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~~---l~~~~-i~I~ 189 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQW---LKKKN-IRIF 189 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHHH---HHhcC-CeEE
Confidence 57788999999999999999999994 577999999999993 2 244444332 445554 44444 4899
Q ss_pred EcCCcccHHHHHhCCee
Q 002310 794 VGDGINDAAALASSHIG 810 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVG 810 (937)
+||..+|..|-++|++-
T Consensus 190 IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 190 YGDSDNDITAAREAGAR 206 (237)
T ss_pred EcCCHHHHHHHHHcCCc
Confidence 99999999999999874
No 96
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.01 E-value=0.0042 Score=59.74 Aligned_cols=104 Identities=17% Similarity=0.241 Sum_probs=73.2
Q ss_pred EEEEEECCEEEEEEEe-----cCcCChhHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCCCceeEe--
Q 002310 706 LVYVGVDNMLAGLIYV-----EDRIRDDAAHVVNSLSSQGIGVYMLSGDK--------KNSAEYVASLVGIPKDKVLS-- 770 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l-----~D~lr~~a~e~I~~L~~aGI~v~mlTGD~--------~~tA~~iA~~~GI~~~~v~a-- 770 (937)
.+.+..|+++..-... +-++.|++.++++.|++.|+++.++|+.. ......+.+.+|+....++.
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 81 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACP 81 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3556677777632111 23678999999999999999999999988 77888899999986332221
Q ss_pred -ccCh--hhHHHHHHHHh-cCCCEEEEEcC-CcccHHHHHhCCe
Q 002310 771 -GVKP--NEKKRFINELQ-NDENVVAMVGD-GINDAAALASSHI 809 (937)
Q Consensus 771 -r~~P--e~K~~iV~~Lq-~~G~~VamvGD-G~NDa~AL~~AdV 809 (937)
...| +-=..+++.++ -....+.|||| -.+|..+.+++++
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 1233 21134444442 34467999999 5999999988875
No 97
>PRK06769 hypothetical protein; Validated
Probab=96.98 E-value=0.0026 Score=64.53 Aligned_cols=109 Identities=14% Similarity=0.153 Sum_probs=76.4
Q ss_pred CCeEEEEEECCEEEEEEEecC----cCChhHHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCCCceeE-
Q 002310 703 NQSLVYVGVDNMLAGLIYVED----RIRDDAAHVVNSLSSQGIGVYMLSGDKKN--------SAEYVASLVGIPKDKVL- 769 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D----~lr~~a~e~I~~L~~aGI~v~mlTGD~~~--------tA~~iA~~~GI~~~~v~- 769 (937)
+.+.+++.+|+++.|-..+.+ ++.|++++++++|++.|+++.++|..... .....-+..|+. .++
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~~ 80 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIYL 80 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEEE
Confidence 567888999999877644443 36899999999999999999999987641 233445567876 333
Q ss_pred e---------ccChhh--HHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 770 S---------GVKPNE--KKRFINELQNDENVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 770 a---------r~~Pe~--K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
+ ...|.- =..+++.+.-.-+.+.||||..+|..|-++|++-...
T Consensus 81 ~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 81 CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 1 123322 2444455544445799999999999999999876543
No 98
>PLN02382 probable sucrose-phosphatase
Probab=96.96 E-value=0.0058 Score=70.64 Aligned_cols=133 Identities=12% Similarity=0.109 Sum_probs=87.1
Q ss_pred EEEEEECCEEEEEEEecC--cCChhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc----------------
Q 002310 706 LVYVGVDNMLAGLIYVED--RIRDDAAHVV-NSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---------------- 766 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D--~lr~~a~e~I-~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---------------- 766 (937)
.++...|++++.- .| .+.+...+++ +++++.|+..+..||-.......+.++.++...
T Consensus 11 lI~sDLDGTLL~~---~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~ 87 (413)
T PLN02382 11 MIVSDLDHTMVDH---HDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGES 87 (413)
T ss_pred EEEEcCCCcCcCC---CCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCC
Confidence 4444567777632 13 3443445555 889999999999999999999999988886211
Q ss_pred -----------------------------------------e--eE---------------------------------e
Q 002310 767 -----------------------------------------K--VL---------------------------------S 770 (937)
Q Consensus 767 -----------------------------------------~--v~---------------------------------a 770 (937)
. ++ -
T Consensus 88 ~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~l 167 (413)
T PLN02382 88 MVPDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDL 167 (413)
T ss_pred CccChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEE
Confidence 0 00 1
Q ss_pred ccChh--hHHHHHHHHhcC----C---CEEEEEcCCcccHHHHHhCC-eeEEeCCChHHHHhhc--------CEEEeC-C
Q 002310 771 GVKPN--EKKRFINELQND----E---NVVAMVGDGINDAAALASSH-IGVAMGGGVGAASEVA--------SVVLMG-N 831 (937)
Q Consensus 771 r~~Pe--~K~~iV~~Lq~~----G---~~VamvGDG~NDa~AL~~Ad-VGIamg~gt~~a~~aA--------DivL~~-~ 831 (937)
.+.|. .|..-++.|.+. | ..|.++||+.||.+||+.++ .||+|+++.+..++.+ +++..+ .
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 11222 255555555333 2 36899999999999999999 6999999988888642 555443 3
Q ss_pred ChhHHHHHHH
Q 002310 832 RLSQLLVALE 841 (937)
Q Consensus 832 ~l~~l~~~i~ 841 (937)
+-..|.++++
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 3444554443
No 99
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.92 E-value=0.0073 Score=65.16 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=65.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEec-----cChhhHHHHHHHHhcCC----CEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-----VKPNEKKRFINELQNDE----NVV 791 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar-----~~Pe~K~~iV~~Lq~~G----~~V 791 (937)
++.|++.+.++.|++.|+++.++|+.....+..+-++.|+.. +.+++. -.|+ ..-+.+.+++.| ..+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~-p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPA-PWMALKNAIELGVYDVAAC 177 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCC-HHHHHHHHHHcCCCCchhe
Confidence 567999999999999999999999999999999989888753 233332 1232 223344444443 459
Q ss_pred EEEcCCcccHHHHHhCCee
Q 002310 792 AMVGDGINDAAALASSHIG 810 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVG 810 (937)
.||||..+|..|-++|.+-
T Consensus 178 l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred EEECCcHHHHHHHHHCCCe
Confidence 9999999999999999864
No 100
>PRK11590 hypothetical protein; Provisional
Probab=96.92 E-value=0.0062 Score=63.86 Aligned_cols=92 Identities=13% Similarity=0.013 Sum_probs=73.1
Q ss_pred cCChhHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---CCceeEe-------------ccChhhHHHHHHHH-h
Q 002310 724 RIRDDAAHVV-NSLSSQGIGVYMLSGDKKNSAEYVASLVGI---PKDKVLS-------------GVKPNEKKRFINEL-Q 785 (937)
Q Consensus 724 ~lr~~a~e~I-~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI---~~~~v~a-------------r~~Pe~K~~iV~~L-q 785 (937)
.+.|++.+.| +.+++.|++++++|+-....+..+++.+|+ + ..+.. .+.-++|..-++.. .
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~ 173 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIG 173 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceEEEEEEEEEccEECCccCCChHHHHHHHHHhC
Confidence 5589999999 678999999999999999999999999994 3 12211 14568998877754 3
Q ss_pred cCCCEEEEEcCCcccHHHHHhCCeeEEeCCC
Q 002310 786 NDENVVAMVGDGINDAAALASSHIGVAMGGG 816 (937)
Q Consensus 786 ~~G~~VamvGDG~NDa~AL~~AdVGIamg~g 816 (937)
......-+=||..||.|+|+.|+-.++++..
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 3334455789999999999999999999743
No 101
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.90 E-value=0.0078 Score=65.07 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=47.3
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+++...||+++- -.+..-+.++++|++|++.||.+++.||-.......+.+++|+
T Consensus 3 LIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 3 LVLSSLDGSLLD---LEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred EEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 566777888763 2455778899999999999999999999999999999999997
No 102
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.89 E-value=0.0079 Score=65.19 Aligned_cols=111 Identities=20% Similarity=0.210 Sum_probs=77.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cCh--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+-....+..+-+.+|+.. +.+++. -.| +-=...++.+.-....++||
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~I 188 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVF 188 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEE
Confidence 578999999999999999999999999999999999999853 223221 133 22233444444445579999
Q ss_pred cCCcccHHHHHhCCeeE-Ee-CCChHHHHhhcCEEEeCCChhHH
Q 002310 795 GDGINDAAALASSHIGV-AM-GGGVGAASEVASVVLMGNRLSQL 836 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGI-am-g~gt~~a~~aADivL~~~~l~~l 836 (937)
||..+|..|-++|++-. ++ |.........+|.++ ++++.+
T Consensus 189 gDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 189 GNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred cCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 99999999999999843 33 322222233577765 445554
No 103
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.87 E-value=0.0027 Score=67.43 Aligned_cols=82 Identities=18% Similarity=0.284 Sum_probs=62.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCC--ceeEeccC-----hhhHHHHHHHHhcCCCEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD----KKNSAEYVASLVGIPK--DKVLSGVK-----PNEKKRFINELQNDENVVA 792 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD----~~~tA~~iA~~~GI~~--~~v~ar~~-----Pe~K~~iV~~Lq~~G~~Va 792 (937)
.+.+++++.++.|++.|+++.++|+- ...++..+.+.+|++. +.+++.-. | +|. ..+++.| .+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp-~~~---~~l~~~~-i~i 188 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQY-TKT---QWIQDKN-IRI 188 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCC-CHH---HHHHhCC-CeE
Confidence 34555999999999999999999996 7779999999999964 23333222 2 243 3455555 479
Q ss_pred EEcCCcccHHHHHhCCee
Q 002310 793 MVGDGINDAAALASSHIG 810 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVG 810 (937)
|+||..||..+-++|.+-
T Consensus 189 ~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 189 HYGDSDNDITAAKEAGAR 206 (237)
T ss_pred EEeCCHHHHHHHHHCCCC
Confidence 999999999999988764
No 104
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.84 E-value=0.011 Score=68.32 Aligned_cols=149 Identities=14% Similarity=0.273 Sum_probs=117.7
Q ss_pred EEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---------------------------
Q 002310 714 MLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--------------------------- 766 (937)
Q Consensus 714 ~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--------------------------- 766 (937)
.|.|++.+..+.+++....|+.|-++-|+.+-.+-.++...+-.|+++||...
T Consensus 816 If~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~ 895 (1354)
T KOG4383|consen 816 IFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAA 895 (1354)
T ss_pred hhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhc
Confidence 48999999999999999999999999999999999999999999999998210
Q ss_pred --------------------------------------------------------------------------eeEecc
Q 002310 767 --------------------------------------------------------------------------KVLSGV 772 (937)
Q Consensus 767 --------------------------------------------------------------------------~v~ar~ 772 (937)
-.|..+
T Consensus 896 qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDc 975 (1354)
T KOG4383|consen 896 QKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDC 975 (1354)
T ss_pred cCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCC
Confidence 257889
Q ss_pred ChhhHHHHHHHHhcCCCEEEEEcCCcccHHH--HHhCCeeEEeCC-------------ChHHHH-hhc------------
Q 002310 773 KPNEKKRFINELQNDENVVAMVGDGINDAAA--LASSHIGVAMGG-------------GVGAAS-EVA------------ 824 (937)
Q Consensus 773 ~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~A--L~~AdVGIamg~-------------gt~~a~-~aA------------ 824 (937)
+|+.--+.|+.+|+.|++|+.+|...|-... .-+||++|++-. .+.+.. ++.
T Consensus 976 npeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqL 1055 (1354)
T KOG4383|consen 976 NPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQL 1055 (1354)
T ss_pred CHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccc
Confidence 9999999999999999999999999886543 368999998831 111111 122
Q ss_pred -----CEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002310 825 -----SVVLMGNRLSQLLVALELSRLTMKTVKQNLWWAFGYNI 862 (937)
Q Consensus 825 -----DivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~a~~~Ni 862 (937)
|+-+-...+-++..+|+-+|..+.-+|+.+.|.+...+
T Consensus 1056 naL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL 1098 (1354)
T KOG4383|consen 1056 NALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQL 1098 (1354)
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 22232333556788888899999999998888765443
No 105
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.80 E-value=0.0074 Score=63.22 Aligned_cols=91 Identities=14% Similarity=0.063 Sum_probs=71.4
Q ss_pred cCChhHHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCC---CCceeEec-------------cChhhHHHHHHHH-h
Q 002310 724 RIRDDAAHVVN-SLSSQGIGVYMLSGDKKNSAEYVASLVGI---PKDKVLSG-------------VKPNEKKRFINEL-Q 785 (937)
Q Consensus 724 ~lr~~a~e~I~-~L~~aGI~v~mlTGD~~~tA~~iA~~~GI---~~~~v~ar-------------~~Pe~K~~iV~~L-q 785 (937)
.++|++.+.|+ .++++|++++++|+=....++.+|+..++ .. .+..+ +.-++|.+-++.. .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~ 172 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LIASQIERGNGGWVLPLRCLGHEKVAQLEQKIG 172 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EEEEEeEEeCCceEcCccCCChHHHHHHHHHhC
Confidence 57999999995 88999999999999999999999998544 21 12111 4558998877754 3
Q ss_pred cCCCEEEEEcCCcccHHHHHhCCeeEEeCC
Q 002310 786 NDENVVAMVGDGINDAAALASSHIGVAMGG 815 (937)
Q Consensus 786 ~~G~~VamvGDG~NDa~AL~~AdVGIamg~ 815 (937)
......-+=||..||.|||+.||-.++++.
T Consensus 173 ~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 173 SPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred CChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 233345688999999999999999999963
No 106
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.76 E-value=0.013 Score=59.68 Aligned_cols=115 Identities=23% Similarity=0.230 Sum_probs=72.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCceeEe----------ccC--hhh
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKDKVLS----------GVK--PNE 776 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~---------------~tA~~iA~~~GI~~~~v~a----------r~~--Pe~ 776 (937)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+.-+.++. ... |+-
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~~ 108 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPGM 108 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHHH
Confidence 4678999999999999999999998763 1122334456763223331 122 232
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccHHHHHhCCeeE-EeCCChH---HHHhhc--CEEEeCCChhHHHHHH
Q 002310 777 KKRFINELQNDENVVAMVGDGINDAAALASSHIGV-AMGGGVG---AASEVA--SVVLMGNRLSQLLVAL 840 (937)
Q Consensus 777 K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVGI-amg~gt~---~a~~aA--DivL~~~~l~~l~~~i 840 (937)
-...++.+.-....+.||||..+|..+-++|++-. .+..|.. .....+ |.++ +++..+..++
T Consensus 109 ~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~el~~~l 176 (181)
T PRK08942 109 LLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLADLPQAL 176 (181)
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHHHHHHH
Confidence 34444555444567999999999999999999743 2223321 112234 7765 4576666554
No 107
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.65 E-value=0.011 Score=69.60 Aligned_cols=116 Identities=16% Similarity=0.219 Sum_probs=82.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c-----cChhhHHHHHHHHhcCCCEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G-----VKPNEKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r-----~~Pe~K~~iV~~Lq~~G~~VamvG 795 (937)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.. +.+++ . -.|+-=...++.++ -..+.|||
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~VG 407 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVVG 407 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEEe
Confidence 688999999999999999999999999999999999999852 12222 1 23432222333332 35799999
Q ss_pred CCcccHHHHHhCCe-eEEeC--CChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 002310 796 DGINDAAALASSHI-GVAMG--GGVGAASEVASVVLMGNRLSQLLVALELS 843 (937)
Q Consensus 796 DG~NDa~AL~~AdV-GIamg--~gt~~a~~aADivL~~~~l~~l~~~i~~~ 843 (937)
|..+|..|-+.|.+ .|++. .+.+.....+|+++ +++..+..++...
T Consensus 408 Ds~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 408 DRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred CCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 99999999999997 44443 22222234578886 5677777665433
No 108
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.61 E-value=0.0058 Score=60.37 Aligned_cols=89 Identities=18% Similarity=0.155 Sum_probs=70.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CCCceeEe------------------ccChhhHHHHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG----IPKDKVLS------------------GVKPNEKKRFI 781 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~G----I~~~~v~a------------------r~~Pe~K~~iV 781 (937)
.++|+-++.++.+++.++.++++|+--..-...+-++++ |...++.+ ..--.+|...|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI 152 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVI 152 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhH
Confidence 589999999999999999999999888877777777766 32111110 11135899999
Q ss_pred HHHhcCCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 782 NELQNDENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 782 ~~Lq~~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
+.|++..+.+-|+|||+.|..|-+.+|+=.|
T Consensus 153 ~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 153 HELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred HHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 9999999999999999999998888777654
No 109
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.60 E-value=0.017 Score=69.36 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=45.9
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
.+++...|++|+.- .+..-+.+.++|++|+++|+.+++.||-.......+++++|+
T Consensus 417 KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 417 KIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred eEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 56777788887531 223445789999999999999999999999999999999986
No 110
>PRK11587 putative phosphatase; Provisional
Probab=96.58 E-value=0.014 Score=61.52 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=71.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-ceeEec-----cChh--hHHHHHHHHhcCCCEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-DKVLSG-----VKPN--EKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-~~v~ar-----~~Pe--~K~~iV~~Lq~~G~~VamvG 795 (937)
++.|++.++++.|++.|+++.++|+.....+...-+..|+.. +.+.+. ..|+ -=....+.+.-....+.|||
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ig 162 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVE 162 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEe
Confidence 578999999999999999999999988777777777788742 122221 2232 11223333333346799999
Q ss_pred CCcccHHHHHhCCee-EEeCCCh-HHHHhhcCEEE
Q 002310 796 DGINDAAALASSHIG-VAMGGGV-GAASEVASVVL 828 (937)
Q Consensus 796 DG~NDa~AL~~AdVG-Iamg~gt-~~a~~aADivL 828 (937)
|..+|..|-++|++- |++..+. ......+|.++
T Consensus 163 Ds~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 197 (218)
T PRK11587 163 DAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVL 197 (218)
T ss_pred cchhhhHHHHHCCCEEEEECCCCchhhhccCCEEe
Confidence 999999999999984 5554332 22334577765
No 111
>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]
Probab=96.55 E-value=0.008 Score=51.57 Aligned_cols=56 Identities=29% Similarity=0.385 Sum_probs=47.4
Q ss_pred EEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcC
Q 002310 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCG 196 (937)
Q Consensus 130 l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~G 196 (937)
...-.|||.+|+..|++.++.++||.+++++...++++|.-+ .++ ..+.+.+++.|
T Consensus 8 v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~---~~p--------~~vl~~l~k~~ 63 (73)
T KOG1603|consen 8 VLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGN---VDP--------VKLLKKLKKTG 63 (73)
T ss_pred EEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEe---cCH--------HHHHHHHHhcC
Confidence 344589999999999999999999999999999999999865 333 67788887755
No 112
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.50 E-value=0.014 Score=59.01 Aligned_cols=105 Identities=21% Similarity=0.227 Sum_probs=76.4
Q ss_pred hCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCceeEeccChhhHHH
Q 002310 701 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK-KNSAEYVASLVGIPKDKVLSGVKPNEKKR 779 (937)
Q Consensus 701 ~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~-~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~ 779 (937)
..+...+.+..|+++.-. =...+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+. .+.....|... -
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~--~~~~~~KP~p~-~ 96 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP--VLPHAVKPPGC-A 96 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE--EEcCCCCCChH-H
Confidence 356677888888775421 133678999999999999999999999988 67788888999985 23333455332 2
Q ss_pred HHHHHhc---CCCEEEEEcCCc-ccHHHHHhCCee
Q 002310 780 FINELQN---DENVVAMVGDGI-NDAAALASSHIG 810 (937)
Q Consensus 780 iV~~Lq~---~G~~VamvGDG~-NDa~AL~~AdVG 810 (937)
+-..+++ ....++||||.. .|..+-+.|++-
T Consensus 97 ~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 97 FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2233333 345699999998 799999999874
No 113
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.50 E-value=0.008 Score=66.61 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=72.8
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe--------------ccChhhHHHHHHH
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS--------------GVKPNEKKRFINE 783 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a--------------r~~Pe~K~~iV~~ 783 (937)
..+++.+++.++++.|++.|+++.++||-...++..+.+.+|+.. +.+.+ +-.|+-+...++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 578999999999999999999999999999999999999888863 01111 2335566666666
Q ss_pred Hhc-CCCEEEEEcCCcccHHHHHhCCeeE
Q 002310 784 LQN-DENVVAMVGDGINDAAALASSHIGV 811 (937)
Q Consensus 784 Lq~-~G~~VamvGDG~NDa~AL~~AdVGI 811 (937)
+-. .-..+.||||..+|+.+-+.|.+-.
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 533 3367999999999999999999874
No 114
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.48 E-value=0.0082 Score=62.07 Aligned_cols=87 Identities=18% Similarity=0.201 Sum_probs=65.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+-+......+.+.+|+.. +.+++ ...|+.. ..+.+.+.-.-..+.||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v 171 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV 171 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE
Confidence 578999999999999999999999999898999999999842 12322 2244322 33444444344678999
Q ss_pred cCCcccHHHHHhCCee
Q 002310 795 GDGINDAAALASSHIG 810 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG 810 (937)
||+.+|+.+-++|++-
T Consensus 172 gD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 172 ASNPWDLGGAKKFGFK 187 (198)
T ss_pred eCCHHHHHHHHHCCCc
Confidence 9999999998888764
No 115
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.46 E-value=0.022 Score=61.26 Aligned_cols=110 Identities=11% Similarity=0.192 Sum_probs=77.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ce-eEecc----Ch--hhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DK-VLSGV----KP--NEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~-v~ar~----~P--e~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|+++.++|+-....+..+-+.+||.+ +. +.+.. .| +--....+.++-....+.||
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~v 187 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEE
Confidence 578899999999999999999999999999999999999853 12 22222 23 22344445554445679999
Q ss_pred cCCcccHHHHHhCCeeEE-eCCC-h--HHHHhhcCEEEeCCChhH
Q 002310 795 GDGINDAAALASSHIGVA-MGGG-V--GAASEVASVVLMGNRLSQ 835 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIa-mg~g-t--~~a~~aADivL~~~~l~~ 835 (937)
||..+|..|-++|++-.. +..| . +.....+|.++. ++..
T Consensus 188 gDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~--~~~e 230 (248)
T PLN02770 188 EDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK--DYED 230 (248)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec--cchh
Confidence 999999999999987532 2222 1 222346787773 4444
No 116
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.44 E-value=0.011 Score=59.72 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=68.9
Q ss_pred EecCcCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCC---------C--ceeEeccCh-hhH--HHHHHHH
Q 002310 720 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGD-KKNSAEYVASLVGIP---------K--DKVLSGVKP-NEK--KRFINEL 784 (937)
Q Consensus 720 ~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD-~~~tA~~iA~~~GI~---------~--~~v~ar~~P-e~K--~~iV~~L 784 (937)
.-+-++.|++.++++.|+++|+++.++|+- ....+..+-+.+|+. . +.+.+.-.| ..| ..+.+.+
T Consensus 41 ~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 41 GTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120 (174)
T ss_pred CCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence 344467899999999999999999999965 889999999999985 2 233322222 222 2345555
Q ss_pred hcC------CCEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 785 QND------ENVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 785 q~~------G~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
.+. -..+.||||...|+.|-++|.+-...
T Consensus 121 ~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 121 NKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 433 25799999999999999998886544
No 117
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.43 E-value=0.013 Score=60.96 Aligned_cols=52 Identities=12% Similarity=0.308 Sum_probs=43.4
Q ss_pred EEEEECCEEEEEEEecC--cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 002310 707 VYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG 762 (937)
Q Consensus 707 ~~v~~~~~~lG~i~l~D--~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~G 762 (937)
+++..|++++. .+ ++.+.+.+++++|++.|++++++||-.......+.++++
T Consensus 2 i~~D~DgTL~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 2 LFFDLDGTLLD----PNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EEEeCcCCCcC----CCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 44566777764 22 578999999999999999999999999999999988755
No 118
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.41 E-value=0.024 Score=57.74 Aligned_cols=118 Identities=20% Similarity=0.332 Sum_probs=93.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-------------------------------------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------------------- 766 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------------------------- 766 (937)
++-|++.++++.|++. ...+++|---.+-+.++|+.+|++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5679999999999876 66777787888889999999998431
Q ss_pred -----eeEeccChhhHHHHHHHHhcC------------------CCEEEEEcCCcccHHHHHhCC-e-eEEeC-CChHHH
Q 002310 767 -----KVLSGVKPNEKKRFINELQND------------------ENVVAMVGDGINDAAALASSH-I-GVAMG-GGVGAA 820 (937)
Q Consensus 767 -----~v~ar~~Pe~K~~iV~~Lq~~------------------G~~VamvGDG~NDa~AL~~Ad-V-GIamg-~gt~~a 820 (937)
.+|.|+.|.+-.+|++..+.- ....++|||.+.|+.||+.+. - |+|+. +|.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 578888887766666655432 234688999999999999884 2 36666 788888
Q ss_pred HhhcCEEEeCCChhHHHHHHHH
Q 002310 821 SEVASVVLMGNRLSQLLVALEL 842 (937)
Q Consensus 821 ~~aADivL~~~~l~~l~~~i~~ 842 (937)
...||+.+...+...+..+|++
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8889999999999888888876
No 119
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.34 E-value=0.018 Score=60.48 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=66.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|++.|++++++|+-+.......-+.+|+.. +.+++ +..|+.. ..+.+.+.-....+.||
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~i 173 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV 173 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 578999999999999999999999988888888889999852 12222 2344322 22333333334579999
Q ss_pred cCCc-ccHHHHHhCCe-eEEeC
Q 002310 795 GDGI-NDAAALASSHI-GVAMG 814 (937)
Q Consensus 795 GDG~-NDa~AL~~AdV-GIamg 814 (937)
||.. +|..+-++|++ .|.+.
T Consensus 174 gDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 174 GDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CCChHHHHHHHHHCCCEEEEEC
Confidence 9998 99999999987 34444
No 120
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.32 E-value=0.013 Score=62.07 Aligned_cols=92 Identities=14% Similarity=0.167 Sum_probs=66.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-ec----cChhh--HHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG----VKPNE--KKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar----~~Pe~--K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|.-+...+...-+..|+.+ +.++ +. -.|+- =....+.+.-....+.||
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~i 172 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFI 172 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 678999999999999999999999998888888888889842 1222 22 23321 122233333334579999
Q ss_pred cCCcccHHHHHhCCee--EEeCC
Q 002310 795 GDGINDAAALASSHIG--VAMGG 815 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG--Iamg~ 815 (937)
||..+|+.+-++|++. +++..
T Consensus 173 gDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 173 DDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred cCCHHHHHHHHHcCCeEEEEEeC
Confidence 9999999999999995 44543
No 121
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.29 E-value=0.024 Score=57.59 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=76.7
Q ss_pred EEEEEECCEEEEEEEe-----cCcCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCC
Q 002310 706 LVYVGVDNMLAGLIYV-----EDRIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPK 765 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l-----~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~---------------~tA~~iA~~~GI~~ 765 (937)
.+++.+||+++---.. +=++.|++.++++.|+++|+++.++|.-+. .....+-.+.|+.-
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL 82 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 4667777777520010 113468999999999999999999997653 12223444555542
Q ss_pred ceeE-e---------------ccChhhH--HHHHHHHhcCCCEEEEEcCCcccHHHHHhCCee--EEeCCChH---HHHh
Q 002310 766 DKVL-S---------------GVKPNEK--KRFINELQNDENVVAMVGDGINDAAALASSHIG--VAMGGGVG---AASE 822 (937)
Q Consensus 766 ~~v~-a---------------r~~Pe~K--~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVG--Iamg~gt~---~a~~ 822 (937)
+.++ + ...|+-. ....+.+.-....+.||||..+|..|-++|++. |.+..|.. ....
T Consensus 83 ~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~ 162 (176)
T TIGR00213 83 DGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAEN 162 (176)
T ss_pred cEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccc
Confidence 2332 1 1233221 222333333346789999999999999999985 34433322 1223
Q ss_pred hcCEEEeCCChhHH
Q 002310 823 VASVVLMGNRLSQL 836 (937)
Q Consensus 823 aADivL~~~~l~~l 836 (937)
.+|.++ +++..|
T Consensus 163 ~ad~~i--~~~~el 174 (176)
T TIGR00213 163 IADWVL--NSLADL 174 (176)
T ss_pred cCCEEe--ccHHHh
Confidence 478887 455544
No 122
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.16 E-value=0.043 Score=62.24 Aligned_cols=111 Identities=18% Similarity=0.201 Sum_probs=79.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChh--hHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPN--EKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe--~K~~iV~~Lq~~G~~Vamv 794 (937)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||.+ +.+++. -.|+ -=...++.++-....+.||
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 477999999999999999999999999999999999999853 123221 2332 2244555555456789999
Q ss_pred cCCcccHHHHHhCCeeEEe-CCChHHH-HhhcCEEEeCCChhHH
Q 002310 795 GDGINDAAALASSHIGVAM-GGGVGAA-SEVASVVLMGNRLSQL 836 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam-g~gt~~a-~~aADivL~~~~l~~l 836 (937)
||..+|+.|-+.|++-... ..+.+.. ...+|+++ +++..+
T Consensus 296 GDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 296 GNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred cCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 9999999999999985432 2332222 23478775 456655
No 123
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.12 E-value=0.015 Score=58.04 Aligned_cols=89 Identities=21% Similarity=0.338 Sum_probs=69.5
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CceeEec-----cCh--hhHHHHHHHHhcCCCEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLSG-----VKP--NEKKRFINELQNDENVVA 792 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~~~v~ar-----~~P--e~K~~iV~~Lq~~G~~Va 792 (937)
..++.|++.+.++.|++.|++++++|+-.........+++|+. .+.+++. ..| +-=..+++.+.-....+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 3578899999999999999999999999999999999999986 2344332 123 222445555554567899
Q ss_pred EEcCCcccHHHHHhCCee
Q 002310 793 MVGDGINDAAALASSHIG 810 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVG 810 (937)
||||..+|..+-++|++-
T Consensus 155 ~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 155 FVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEESSHHHHHHHHHTTSE
T ss_pred EEeCCHHHHHHHHHcCCe
Confidence 999999999999988764
No 124
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.07 E-value=0.047 Score=53.62 Aligned_cols=104 Identities=22% Similarity=0.270 Sum_probs=80.1
Q ss_pred HHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHH
Q 002310 699 EDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKK 778 (937)
Q Consensus 699 ~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~ 778 (937)
....|.+-+.+..|++++..= ....-|++++-++.++++|+++.++|-.++..+..+++.+|++ -++--..|--+
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A~KP~~~- 97 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRAKKPFGR- 97 (175)
T ss_pred HHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecccCccHH-
Confidence 445678888899999987643 3466788999999999999999999999999999999999997 55555667655
Q ss_pred HHHHHHhcC---CCEEEEEcCC-cccHHHHHhC
Q 002310 779 RFINELQND---ENVVAMVGDG-INDAAALASS 807 (937)
Q Consensus 779 ~iV~~Lq~~---G~~VamvGDG-~NDa~AL~~A 807 (937)
.+-+++++. -+.|+||||- .-|+-+=..|
T Consensus 98 ~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~ 130 (175)
T COG2179 98 AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRA 130 (175)
T ss_pred HHHHHHHHcCCChhHEEEEcchhhhhhhccccc
Confidence 455555554 4689999996 4565444443
No 125
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.00 E-value=0.026 Score=62.06 Aligned_cols=111 Identities=15% Similarity=0.197 Sum_probs=73.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---CCc-eeEec-----cChhh--HHHHHHHHhcCCCEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI---PKD-KVLSG-----VKPNE--KKRFINELQNDENVVA 792 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI---~~~-~v~ar-----~~Pe~--K~~iV~~Lq~~G~~Va 792 (937)
++.|++.+.++.|++.|+++.++|+-+......+-+..++ ... .+++. ..|+- =..+.+.+.-....+.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 5789999999999999999999999888888776665532 110 22211 12322 2334444444456799
Q ss_pred EEcCCcccHHHHHhCCeeEEeC-CC--hHHHHhhcCEEEeCCChhHH
Q 002310 793 MVGDGINDAAALASSHIGVAMG-GG--VGAASEVASVVLMGNRLSQL 836 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVGIamg-~g--t~~a~~aADivL~~~~l~~l 836 (937)
||||..+|..|-++|++....- .| ..-....+|+++ +++..+
T Consensus 224 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 224 VVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred EEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 9999999999999999765442 22 111123578876 445444
No 126
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.00 E-value=0.053 Score=67.73 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=49.8
Q ss_pred HHhCCCeEEEEEECCEEEEEEEe--cCcCChhHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 699 EDLMNQSLVYVGVDNMLAGLIYV--EDRIRDDAAHVVNSLSS-QGIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 699 ~~~~~~~~~~v~~~~~~lG~i~l--~D~lr~~a~e~I~~L~~-aGI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
+......++++..||+++....- ...+.+++.+++++|.+ .|+.|+++||.............++
T Consensus 487 y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l 554 (726)
T PRK14501 487 YRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPI 554 (726)
T ss_pred HHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCe
Confidence 33445688999999998864211 12367899999999999 6999999999999988877665553
No 127
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.99 E-value=0.03 Score=58.86 Aligned_cols=113 Identities=13% Similarity=0.244 Sum_probs=76.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChhhH--HHHHHHH-hcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNEK--KRFINEL-QNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe~K--~~iV~~L-q~~G~~Vam 793 (937)
++.|++.+.++.|++. +++.++|+-....+..+.+++|+.. +.+++. ..|+.. ...++.+ .-....+.|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence 5789999999999999 9999999999999999999999842 234332 134332 2334444 323356999
Q ss_pred EcCCc-ccHHHHHhCCe-eEEeC--CChHHHHhhcCEEEeCCChhHHHHH
Q 002310 794 VGDGI-NDAAALASSHI-GVAMG--GGVGAASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 794 vGDG~-NDa~AL~~AdV-GIamg--~gt~~a~~aADivL~~~~l~~l~~~ 839 (937)
|||.. +|..+-+.+++ .|.+. .........+|.++ +++..|..+
T Consensus 176 igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 176 IGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred ECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 99998 89999999996 33332 22212223456555 456666543
No 128
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.96 E-value=0.014 Score=59.48 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=59.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++.|+++|+++.++|+... +..+.+.+|+.. +.++. +-.|+-. ....+.+.-....+.||
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v 164 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI 164 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 6789999999999999999999996432 456788889852 12221 2233211 22333333233569999
Q ss_pred cCCcccHHHHHhCCee
Q 002310 795 GDGINDAAALASSHIG 810 (937)
Q Consensus 795 GDG~NDa~AL~~AdVG 810 (937)
||..+|+.+-++|++-
T Consensus 165 gD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 165 EDAQAGIEAIKAAGMF 180 (185)
T ss_pred ecCHHHHHHHHHcCCE
Confidence 9999999999999874
No 129
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.96 E-value=0.026 Score=57.12 Aligned_cols=85 Identities=16% Similarity=0.250 Sum_probs=61.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeE-ec----cChh--hHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVL-SG----VKPN--EKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~-ar----~~Pe--~K~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.. +.++ +. ..|+ -=..+.+.+.-....+.||
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 678999999999999999999999988777 66666688842 2332 22 2232 2233444444445689999
Q ss_pred cCCcccHHHHHhCCe
Q 002310 795 GDGINDAAALASSHI 809 (937)
Q Consensus 795 GDG~NDa~AL~~AdV 809 (937)
||...|..+-+++.+
T Consensus 164 gD~~~di~aA~~~G~ 178 (183)
T TIGR01509 164 DDSPAGIEAAKAAGM 178 (183)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999888876
No 130
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.95 E-value=0.073 Score=53.01 Aligned_cols=88 Identities=19% Similarity=0.298 Sum_probs=65.6
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHH-----cCCCCceeEe--------------ccChhh-HH
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE---YVASL-----VGIPKDKVLS--------------GVKPNE-KK 778 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~---~iA~~-----~GI~~~~v~a--------------r~~Pe~-K~ 778 (937)
+|.+.++++++++++++.|++++.+||-....+. ...++ .+++...+++ .-.|++ |.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 3788999999999999999999999999988874 44555 2343211111 233544 88
Q ss_pred HHHHHHhc-----CCCEEEEEcCCcccHHHHHhCCe
Q 002310 779 RFINELQN-----DENVVAMVGDGINDAAALASSHI 809 (937)
Q Consensus 779 ~iV~~Lq~-----~G~~VamvGDG~NDa~AL~~AdV 809 (937)
+.++.+++ ....++..||+.+|+.+-++++|
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 88888776 34677889999999999988765
No 131
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.80 E-value=0.027 Score=55.44 Aligned_cols=87 Identities=18% Similarity=0.280 Sum_probs=60.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCc-eeEec---------cChhhH-
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKK---------------NSAEYVASLVGIPKD-KVLSG---------VKPNEK- 777 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~---------------~tA~~iA~~~GI~~~-~v~ar---------~~Pe~K- 777 (937)
++.|++.++++.|++.|+++.++|.... .....+.+.+|+... .+++. ..|+-+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 4689999999999999999999998662 455667788998522 22221 134322
Q ss_pred -HHHHHHHhcCCCEEEEEcCCcccHHHHHhCCee
Q 002310 778 -KRFINELQNDENVVAMVGDGINDAAALASSHIG 810 (937)
Q Consensus 778 -~~iV~~Lq~~G~~VamvGDG~NDa~AL~~AdVG 810 (937)
..+++.+.-....+.||||...|..+-+.+++-
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 223333332345799999999999998888763
No 132
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.71 E-value=0.053 Score=54.56 Aligned_cols=106 Identities=11% Similarity=0.129 Sum_probs=68.6
Q ss_pred CeEEEEEECCEEEEEEE----ecC--c---CChhHHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHcC
Q 002310 704 QSLVYVGVDNMLAGLIY----VED--R---IRDDAAHVVNSLSSQGIGVYMLSGDKKN------------SAEYVASLVG 762 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~----l~D--~---lr~~a~e~I~~L~~aGI~v~mlTGD~~~------------tA~~iA~~~G 762 (937)
...+++..|++++-... ..+ + +-|++.++++.|++.|+++.++|.-... ....+.+.+|
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~g 92 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLK 92 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcC
Confidence 35677788888774221 112 2 3499999999999999999999965442 4567888999
Q ss_pred CCCceeEe-c----cChhhH--HHHHHHHh--cCCCEEEEEcCCc--------ccHHHHHhCCe
Q 002310 763 IPKDKVLS-G----VKPNEK--KRFINELQ--NDENVVAMVGDGI--------NDAAALASSHI 809 (937)
Q Consensus 763 I~~~~v~a-r----~~Pe~K--~~iV~~Lq--~~G~~VamvGDG~--------NDa~AL~~AdV 809 (937)
+....+.+ . -.|+.. ..+.+.+. -....+.||||.. +|..+-++|++
T Consensus 93 l~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi 156 (166)
T TIGR01664 93 VPIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGL 156 (166)
T ss_pred CCEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCC
Confidence 86433322 1 123211 22333332 1235699999986 69988888766
No 133
>PLN02580 trehalose-phosphatase
Probab=95.69 E-value=0.1 Score=59.16 Aligned_cols=76 Identities=12% Similarity=0.241 Sum_probs=50.5
Q ss_pred HHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecC--cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 002310 681 DWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYV 757 (937)
Q Consensus 681 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D--~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~i 757 (937)
.|+.++-.....++....+.......+++.+||++.-+..--| .+-++.++++++|.+. ..|.++||-........
T Consensus 96 ~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~ 173 (384)
T PLN02580 96 TWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYEL 173 (384)
T ss_pred HHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHH
Confidence 3555443333344455555555678888999999987552212 2356889999999887 48999999876655443
No 134
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.68 E-value=0.024 Score=57.72 Aligned_cols=86 Identities=16% Similarity=0.226 Sum_probs=61.7
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-----ccChhhH--HHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-----GVKPNEK--KRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-----r~~Pe~K--~~iV~~Lq~~G~~Vam 793 (937)
-++.|++.++++.|++.|+++.++|+- ..+..+-+..|+.. +.+++ +..|+.. ..+.+.+.-....+.|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 378999999999999999999999986 56778888889842 23332 2234322 1222333223356899
Q ss_pred EcCCcccHHHHHhCCee
Q 002310 794 VGDGINDAAALASSHIG 810 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVG 810 (937)
|||..+|..+-++|++-
T Consensus 165 IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 165 FEDALAGVQAARAAGMF 181 (185)
T ss_pred EeCcHhhHHHHHHCCCe
Confidence 99999999999999874
No 135
>PRK09449 dUMP phosphatase; Provisional
Probab=95.66 E-value=0.062 Score=56.67 Aligned_cols=114 Identities=19% Similarity=0.235 Sum_probs=75.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ce-eEecc----ChhhH--HHHHHHHhcC-CCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DK-VLSGV----KPNEK--KRFINELQND-ENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~-v~ar~----~Pe~K--~~iV~~Lq~~-G~~Vam 793 (937)
++.|++.++++.|+ .|+++.++|......+...-+..|+.. +. +.+.- .|+.. ..+++.+.-. ...+.|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 47899999999999 689999999998888888888899842 12 33322 34321 2233333321 246999
Q ss_pred EcCCc-ccHHHHHhCCee-EEeC-CChH-HHHhhcCEEEeCCChhHHHHHH
Q 002310 794 VGDGI-NDAAALASSHIG-VAMG-GGVG-AASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 794 vGDG~-NDa~AL~~AdVG-Iamg-~gt~-~a~~aADivL~~~~l~~l~~~i 840 (937)
|||.. +|..+-++|++- |.+. .+.. .....+|.++ +++..+..++
T Consensus 174 vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred EcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 99998 799999999985 4443 2221 1112467766 4577666543
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.59 E-value=0.048 Score=58.94 Aligned_cols=83 Identities=19% Similarity=0.312 Sum_probs=63.4
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCC---ceeEeccChhhHHHHHHHHhcCCCEEEEEc
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDK---KNSAEYVASLVGIPK---DKVLSGVKPNEKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~---~~tA~~iA~~~GI~~---~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvG 795 (937)
..++-|++.+.++.|++.|+++.++|+-. ...+...-+..|++. +.++.|-....|....+.+.+...+++|+|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Ivl~vG 195 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIVLLFG 195 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEEEEEC
Confidence 34677999999999999999999999965 344456667789953 456666444567777777766667899999
Q ss_pred CCcccHHHH
Q 002310 796 DGINDAAAL 804 (937)
Q Consensus 796 DG~NDa~AL 804 (937)
|-.+|....
T Consensus 196 D~~~Df~~~ 204 (266)
T TIGR01533 196 DNLLDFDDF 204 (266)
T ss_pred CCHHHhhhh
Confidence 999998543
No 137
>PLN02940 riboflavin kinase
Probab=95.56 E-value=0.047 Score=62.61 Aligned_cols=110 Identities=17% Similarity=0.167 Sum_probs=73.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCC--ceeEe-----ccChh--hHHHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS-LVGIPK--DKVLS-----GVKPN--EKKRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~-~~GI~~--~~v~a-----r~~Pe--~K~~iV~~Lq~~G~~Vam 793 (937)
++.|++.+.++.|++.|+++.++|+-....+...-+ ..|+.. +.+++ +..|+ -=..+++.+.-..+.+.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~ 172 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLV 172 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 577999999999999999999999999888877665 678732 12222 12332 223344444434567999
Q ss_pred EcCCcccHHHHHhCCeeE-EeCCC--hHHHHhhcCEEEeCCChhH
Q 002310 794 VGDGINDAAALASSHIGV-AMGGG--VGAASEVASVVLMGNRLSQ 835 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGI-amg~g--t~~a~~aADivL~~~~l~~ 835 (937)
|||..+|..|-++|++-. ++..+ .......+|.++ +++..
T Consensus 173 VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i--~sl~e 215 (382)
T PLN02940 173 IEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI--NSLLD 215 (382)
T ss_pred EeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe--CCHhH
Confidence 999999999999999864 33322 222333466665 34444
No 138
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.20 E-value=0.049 Score=61.31 Aligned_cols=88 Identities=19% Similarity=0.190 Sum_probs=62.4
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCceeE-ec---------cChhhH
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKVL-SG---------VKPNEK 777 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD---------------~~~tA~~iA~~~GI~~~~v~-ar---------~~Pe~K 777 (937)
-++.|++.++++.|++.|+++.++|.- .......+.+..|+.-+.++ +- -.|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~-- 106 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPK-- 106 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCC--
Confidence 367899999999999999999999982 24456678888888532332 21 1232
Q ss_pred HHHHHHHhc----CCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 778 KRFINELQN----DENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 778 ~~iV~~Lq~----~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
-.++..+.+ ....+.||||+.+|..+-+.|.+-..
T Consensus 107 p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 107 TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 334433322 23679999999999999999988643
No 139
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.16 E-value=0.12 Score=55.27 Aligned_cols=98 Identities=17% Similarity=0.254 Sum_probs=66.9
Q ss_pred CeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCCC---ceeEeccChhh-H
Q 002310 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE--YVASLVGIPK---DKVLSGVKPNE-K 777 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~--~iA~~~GI~~---~~v~ar~~Pe~-K 777 (937)
...+.+..|+++ .-.+.+-|++.+++++|+++|+++.++|.-...... ...+++|+.. +.++ ++.+ .
T Consensus 8 ~~~~~~D~dG~l----~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii---~s~~~~ 80 (242)
T TIGR01459 8 YDVFLLDLWGVI----IDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMII---SSGEIA 80 (242)
T ss_pred CCEEEEeccccc----ccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEE---ccHHHH
Confidence 345556666544 456778999999999999999999999986655444 5668899974 2333 2222 1
Q ss_pred HHHHHH-Hhc---CCCEEEEEcCCcccHHHHHhCC
Q 002310 778 KRFINE-LQN---DENVVAMVGDGINDAAALASSH 808 (937)
Q Consensus 778 ~~iV~~-Lq~---~G~~VamvGDG~NDa~AL~~Ad 808 (937)
...++. +++ .+..+.|+||+.+|...+...+
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 123332 333 2467999999999998886543
No 140
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.14 E-value=0.062 Score=60.20 Aligned_cols=109 Identities=15% Similarity=0.162 Sum_probs=79.9
Q ss_pred EEEEEECCEEEEEEEecC--------cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCceeEeccC
Q 002310 706 LVYVGVDNMLAGLIYVED--------RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL----VGIPKDKVLSGVK 773 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D--------~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~----~GI~~~~v~ar~~ 773 (937)
++.+..|+++-|-+.-+| ++.+++.++++.|++.|+++.++|.-+...+..+-++ +|+...-......
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~ 84 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN 84 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe
Confidence 445555666666555555 4578999999999999999999999999999999998 8886321221233
Q ss_pred hhhHHHHHHHH----hcCCCEEEEEcCCcccHHHHHhCCeeEEeC
Q 002310 774 PNEKKRFINEL----QNDENVVAMVGDGINDAAALASSHIGVAMG 814 (937)
Q Consensus 774 Pe~K~~iV~~L----q~~G~~VamvGDG~NDa~AL~~AdVGIamg 814 (937)
++-|.+.++.+ .-.-..++||||...|..+.+++...+.+-
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 34455444443 223368999999999999999999887553
No 141
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.06 E-value=0.069 Score=52.60 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=57.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec----cChh--hHHHHHHHHhcCCCEEEEEc
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG----VKPN--EKKRFINELQNDENVVAMVG 795 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar----~~Pe--~K~~iV~~Lq~~G~~VamvG 795 (937)
...+++.+.++.|++.|+++.++|+-....+....+.. +.. +.+++. ..|+ -=..+.+.+.-.. .++|||
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l~iG 141 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVLHVG 141 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEEEEe
Confidence 44589999999999999999999999988888887774 321 123322 2332 1122233333234 799999
Q ss_pred CCcccHHHHHhCC
Q 002310 796 DGINDAAALASSH 808 (937)
Q Consensus 796 DG~NDa~AL~~Ad 808 (937)
|..+|..|-++|.
T Consensus 142 Ds~~Di~aa~~aG 154 (154)
T TIGR01549 142 DNLNDIEGARNAG 154 (154)
T ss_pred CCHHHHHHHHHcc
Confidence 9999998887763
No 142
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.85 E-value=0.077 Score=56.17 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=64.4
Q ss_pred cCChhHHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCCCc------------------------eeEeccCh-hh
Q 002310 724 RIRDDAAHVVNSL--SSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------------------KVLSGVKP-NE 776 (937)
Q Consensus 724 ~lr~~a~e~I~~L--~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------------------~v~ar~~P-e~ 776 (937)
|+.|+.++.++.| ++.|+.+.++|-=|..--..+-+.-|+... +-+.++.| .=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 6788999999999 568999999999999999999999998421 11223334 47
Q ss_pred HHHHHHHHhcC----C---CEEEEEcCCcccH-HHH
Q 002310 777 KKRFINELQND----E---NVVAMVGDGINDA-AAL 804 (937)
Q Consensus 777 K~~iV~~Lq~~----G---~~VamvGDG~NDa-~AL 804 (937)
|..+++.+++. | .+|.+||||.||- |++
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 99999988775 4 6999999999996 444
No 143
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.82 E-value=0.15 Score=53.80 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=59.1
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCC-ceeEeccC-hhh------HHHHHHHHhcCCC-E
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS---AEYVASLVGIPK-DKVLSGVK-PNE------KKRFINELQNDEN-V 790 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t---A~~iA~~~GI~~-~~v~ar~~-Pe~------K~~iV~~Lq~~G~-~ 790 (937)
-|.-|++.+.++.|++.|++|+++||-.+.. +..--++.|++. +.++-|-. .+. |.+.=+.+.++|+ +
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrI 198 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRI 198 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceE
Confidence 4788999999999999999999999998765 334445678863 45555531 112 6666667777776 6
Q ss_pred EEEEcCCcccH
Q 002310 791 VAMVGDGINDA 801 (937)
Q Consensus 791 VamvGDG~NDa 801 (937)
++.+||-.+|.
T Consensus 199 v~~iGDq~sDl 209 (229)
T TIGR01675 199 WGNIGDQWSDL 209 (229)
T ss_pred EEEECCChHHh
Confidence 77899999886
No 144
>PLN02811 hydrolase
Probab=94.76 E-value=0.086 Score=55.57 Aligned_cols=90 Identities=18% Similarity=0.224 Sum_probs=59.2
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH-HHHHHcCCCC--ceeEecc-------Chh--hHHHHHHHHh---cC
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE-YVASLVGIPK--DKVLSGV-------KPN--EKKRFINELQ---ND 787 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~-~iA~~~GI~~--~~v~ar~-------~Pe--~K~~iV~~Lq---~~ 787 (937)
-++.|++.+.|+.|++.|+++.++||-...... ...+..++.. +.+++.- .|+ -=...++.+. -.
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 156 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD 156 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence 357899999999999999999999997765433 2333334421 1222222 222 1133334442 22
Q ss_pred CCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 788 ENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 788 G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
...+.||||...|+.|-++|++-..
T Consensus 157 ~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 157 PGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred ccceEEEeccHhhHHHHHHCCCeEE
Confidence 3579999999999999999998543
No 145
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.75 E-value=0.13 Score=55.30 Aligned_cols=61 Identities=26% Similarity=0.296 Sum_probs=41.2
Q ss_pred hHHHHHHHHhcC----CCEEEEEcCCcccHHHHHhC--------CeeEEeCCChHHHHhhcCEEEeCCChhHHHHHH
Q 002310 776 EKKRFINELQND----ENVVAMVGDGINDAAALASS--------HIGVAMGGGVGAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 776 ~K~~iV~~Lq~~----G~~VamvGDG~NDa~AL~~A--------dVGIamg~gt~~a~~aADivL~~~~l~~l~~~i 840 (937)
+|...++.+.++ ...++|+||+.||.+|++.+ ..+|.|+.|. .+..|++++- +...+...+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 455555544332 24689999999999999999 4788885332 3456888774 566665554
No 146
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.74 E-value=0.089 Score=54.50 Aligned_cols=85 Identities=16% Similarity=0.231 Sum_probs=59.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEe-c----cChhh--HHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLS-G----VKPNE--KKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~a-r----~~Pe~--K~~iV~~Lq~~G~~Vamv 794 (937)
++-|++.++++.|++.|+++.++|+-... ...+.+.+|+.. +.++. . ..|+- =..+++.+.-....+.||
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I 183 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI 183 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 57799999999999999999999975544 467778888842 12222 1 13432 122333333334679999
Q ss_pred cCCc-ccHHHHHhCCe
Q 002310 795 GDGI-NDAAALASSHI 809 (937)
Q Consensus 795 GDG~-NDa~AL~~AdV 809 (937)
||.. +|..+-++|++
T Consensus 184 gD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 184 GDSLRNDYQGARAAGW 199 (203)
T ss_pred CCCchHHHHHHHHcCC
Confidence 9997 89988888765
No 147
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.72 E-value=0.087 Score=52.72 Aligned_cols=88 Identities=18% Similarity=0.226 Sum_probs=61.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCcee-Ee-----cc----ChhhHH
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD---------------KKNSAEYVASLVGIPKDKV-LS-----GV----KPNEKK 778 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD---------------~~~tA~~iA~~~GI~~~~v-~a-----r~----~Pe~K~ 778 (937)
++-|++.+++++|++.|+++.++|-- .......+.+..|+.-+.+ ++ .. .|. .
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~--~ 106 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPK--I 106 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCC--H
Confidence 45689999999999999999999974 2456677888889862223 33 11 232 2
Q ss_pred HHHHH-HhcC---CCEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 779 RFINE-LQND---ENVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 779 ~iV~~-Lq~~---G~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
.+++. +++. ...+.||||..+|..+-++|.+-...
T Consensus 107 ~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 107 KLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 23332 2333 34699999999999999998876443
No 148
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.70 E-value=0.14 Score=51.29 Aligned_cols=98 Identities=23% Similarity=0.283 Sum_probs=76.2
Q ss_pred hCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCC--eEEEEcCC-------CHHHHHHHHHHcCCCCcee-Ee
Q 002310 701 LMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGI--GVYMLSGD-------KKNSAEYVASLVGIPKDKV-LS 770 (937)
Q Consensus 701 ~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI--~v~mlTGD-------~~~tA~~iA~~~GI~~~~v-~a 770 (937)
..|...+.+..|+++.. --++++-|+..+.+++|++.+. +|.++|-- +...|+.+++.+||+ .+ +.
T Consensus 38 ~~Gik~li~DkDNTL~~--~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~h~ 113 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTP--PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLRHR 113 (168)
T ss_pred hcCceEEEEcCCCCCCC--CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEEeC
Confidence 45667777888887532 4678899999999999999987 49999976 488999999999996 43 34
Q ss_pred ccChhhHHHHHHHHhcC-----CCEEEEEcCC-cccHH
Q 002310 771 GVKPNEKKRFINELQND-----ENVVAMVGDG-INDAA 802 (937)
Q Consensus 771 r~~Pe~K~~iV~~Lq~~-----G~~VamvGDG-~NDa~ 802 (937)
.-.|.-..++.+.++.+ -+.++||||= .-|+-
T Consensus 114 ~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 114 AKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred CCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 46897777888888765 5679999995 34443
No 149
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.64 E-value=0.12 Score=49.56 Aligned_cols=83 Identities=10% Similarity=0.097 Sum_probs=58.4
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC-------CCC---ceeEeccChhhH--HHHHHHHh--cCC
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGD-KKNSAEYVASLVG-------IPK---DKVLSGVKPNEK--KRFINELQ--NDE 788 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD-~~~tA~~iA~~~G-------I~~---~~v~ar~~Pe~K--~~iV~~Lq--~~G 788 (937)
++.+++.+.++.|++.|+++.++|+- .+..+..+-+..+ +.. ..+.++-.|+-+ ...++.+. -..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 58999999999999999999999999 7888878777777 321 123332344333 22333333 334
Q ss_pred CEEEEEcCCcccHHHHHh
Q 002310 789 NVVAMVGDGINDAAALAS 806 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~ 806 (937)
..+.||||...|.-+++.
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 789999999988776653
No 150
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=94.51 E-value=0.13 Score=54.21 Aligned_cols=38 Identities=26% Similarity=0.298 Sum_probs=31.0
Q ss_pred hHHHHHHHHhc----CCCEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 776 EKKRFINELQN----DENVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 776 ~K~~iV~~Lq~----~G~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
.|..-++.+.+ ....|+++||+.||.+||+.|+.|||+
T Consensus 179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 57766666533 245799999999999999999999996
No 151
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.24 E-value=0.13 Score=54.11 Aligned_cols=93 Identities=11% Similarity=0.177 Sum_probs=65.8
Q ss_pred ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCC--ceeE---eccChhh--HHHHHHHHhcCCCE
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV---GIPK--DKVL---SGVKPNE--KKRFINELQNDENV 790 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~---GI~~--~~v~---ar~~Pe~--K~~iV~~Lq~~G~~ 790 (937)
++-++.||+.+++++|+++|+++.++|..+......+-+.. ++.+ +.+| ....|+- =..+++.+.-....
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 44579999999999999999999999998888777766654 3311 0111 1123322 23445555444467
Q ss_pred EEEEcCCcccHHHHHhCCeeEEe
Q 002310 791 VAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIam 813 (937)
++||||...|+.|-++|++-...
T Consensus 172 ~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 172 ILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred EEEEeCCHHHHHHHHHcCCEEEE
Confidence 99999999999999999986544
No 152
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.11 E-value=0.079 Score=52.20 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=65.4
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEec-cChhhHHHHHHHHhc---CCCEEEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-VKPNEKKRFINELQN---DENVVAMV 794 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar-~~Pe~K~~iV~~Lq~---~G~~Vamv 794 (937)
.-++||++.+.++.|+ .++++.+.|.=+...+..+-+.+++.. +.++++ -....|-.+.+.+++ ....+.||
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEE
Confidence 3367999999999999 579999999999999999999999853 233332 111222225444444 34689999
Q ss_pred cCCcccHHHHHhCCeeEE
Q 002310 795 GDGINDAAALASSHIGVA 812 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIa 812 (937)
||..+|..+-++|.|-|.
T Consensus 122 ~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 122 DDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ECCHHHhhcCccCEEEec
Confidence 999999988777755443
No 153
>PTZ00174 phosphomannomutase; Provisional
Probab=92.98 E-value=0.083 Score=56.80 Aligned_cols=54 Identities=22% Similarity=0.295 Sum_probs=46.6
Q ss_pred hhHHHHHHHHhcCCCEEEEEcC----CcccHHHHHhC-CeeEEeCCChHHHHhhcCEEE
Q 002310 775 NEKKRFINELQNDENVVAMVGD----GINDAAALASS-HIGVAMGGGVGAASEVASVVL 828 (937)
Q Consensus 775 e~K~~iV~~Lq~~G~~VamvGD----G~NDa~AL~~A-dVGIamg~gt~~a~~aADivL 828 (937)
-.|..-++.|.+.-..|+++|| |.||.+||+.| -.|+++++..+..+..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 5899999999887788999999 99999999987 788999888888888776543
No 154
>PLN03017 trehalose-phosphatase
Probab=92.85 E-value=1.5 Score=49.51 Aligned_cols=63 Identities=11% Similarity=0.162 Sum_probs=48.4
Q ss_pred hHHHHHhCCCeEEEEEECCEEEEEEEecC--cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002310 695 EVEMEDLMNQSLVYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758 (937)
Q Consensus 695 ~~~~~~~~~~~~~~v~~~~~~lG~i~l~D--~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA 758 (937)
...........++++..||+|+-++.-.| .+-++..++|++|. .|+.++++||-.......+.
T Consensus 102 ~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 102 QIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 33333344567788889999987665434 47889999999999 78999999999988887664
No 155
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.82 E-value=0.71 Score=47.41 Aligned_cols=57 Identities=23% Similarity=0.340 Sum_probs=44.4
Q ss_pred CeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
..+++...|+++++ =+.+ . ..+.+.+.+|+++|+.|+.+|.-....-...-+.+|+.
T Consensus 7 ~~lIFtDlD~TLl~-~~ye--~-~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 7 PLLIFTDLDGTLLP-HSYE--W-QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ceEEEEcccCcccC-CCCC--C-CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 35677788888877 2222 2 24678999999999999999988888778888888873
No 156
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.54 E-value=0.18 Score=52.53 Aligned_cols=88 Identities=16% Similarity=0.203 Sum_probs=57.6
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCCC--ceeEec-----cChhhH--HHHHHHHhcCCCEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNS--AEYVASLVGIPK--DKVLSG-----VKPNEK--KRFINELQNDENVV 791 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~t--A~~iA~~~GI~~--~~v~ar-----~~Pe~K--~~iV~~Lq~~G~~V 791 (937)
-++.|++.+.++.|++.|+++.++|...... ........++.. +.+++. ..|+-. ..+.+.+.-....+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~ 172 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC 172 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 3678999999999999999999999865433 332233344421 133321 244322 23334443334568
Q ss_pred EEEcCCcccHHHHHhCCee
Q 002310 792 AMVGDGINDAAALASSHIG 810 (937)
Q Consensus 792 amvGDG~NDa~AL~~AdVG 810 (937)
+||||...|+.+-++|++-
T Consensus 173 l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 173 VFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred EEEcCCHHHHHHHHHcCCE
Confidence 9999999999999999884
No 157
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.49 E-value=0.59 Score=60.65 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=77.8
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEe-----ccChhh--HHHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLS-----GVKPNE--KKRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~a-----r~~Pe~--K~~iV~~Lq~~G~~Vam 793 (937)
.+-|++.+.++.|+++|+++.++|+-....+..+-+..|+.. +.+++ +..|+. =....+.+.-....+.|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~ 240 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVV 240 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEE
Confidence 467999999999999999999999999999998889999851 22222 223332 23444444444567999
Q ss_pred EcCCcccHHHHHhCCe-eEEeCCC---hHHHHhhcCEEEeCCChhHH
Q 002310 794 VGDGINDAAALASSHI-GVAMGGG---VGAASEVASVVLMGNRLSQL 836 (937)
Q Consensus 794 vGDG~NDa~AL~~AdV-GIamg~g---t~~a~~aADivL~~~~l~~l 836 (937)
|||..+|+.|-++|.+ -|++..+ .+.....+|.++ +++..+
T Consensus 241 IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi--~~l~el 285 (1057)
T PLN02919 241 IEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR--KDIGNI 285 (1057)
T ss_pred EcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE--CChHHC
Confidence 9999999999999988 3344322 233344677777 445543
No 158
>COG4907 Predicted membrane protein [Function unknown]
Probab=92.46 E-value=0.089 Score=58.76 Aligned_cols=28 Identities=43% Similarity=0.807 Sum_probs=11.3
Q ss_pred cccCCcCCCCCCCCCCCCCCCCCCCCCC
Q 002310 71 MSSCAASFGAAGGSAGGDVGGGGGGGGG 98 (937)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 98 (937)
.|++++|..++.+|||+|+.||+.||||
T Consensus 564 ysa~a~S~~~~~~GGG~G~~gGg~GGGG 591 (595)
T COG4907 564 YSAIASSRRSSSSGGGGGFSGGGSGGGG 591 (595)
T ss_pred hhcccccccCCCCCCCCCcCCCCCCCCC
Confidence 4444444444333333333344444333
No 159
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=92.34 E-value=0.25 Score=45.28 Aligned_cols=85 Identities=20% Similarity=0.313 Sum_probs=54.9
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC--CceeEeccChhhHHHHHHHHhc--CCCE
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA---SLVGIP--KDKVLSGVKPNEKKRFINELQN--DENV 790 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA---~~~GI~--~~~v~ar~~Pe~K~~iV~~Lq~--~G~~ 790 (937)
++...+++=|++.++|+.|+++|++++++|-....+...++ +.+|++ .++++ +|-+ ...+.|++ .+.+
T Consensus 8 vl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~---ts~~--~~~~~l~~~~~~~~ 82 (101)
T PF13344_consen 8 VLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEII---TSGM--AAAEYLKEHKGGKK 82 (101)
T ss_dssp TSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEE---EHHH--HHHHHHHHHTTSSE
T ss_pred EeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEE---ChHH--HHHHHHHhcCCCCE
Confidence 44567888999999999999999999999988755544444 667874 22343 2222 23334444 5789
Q ss_pred EEEEcCCcccHHHHHhCC
Q 002310 791 VAMVGDGINDAAALASSH 808 (937)
Q Consensus 791 VamvGDG~NDa~AL~~Ad 808 (937)
|.++|.. .....++.++
T Consensus 83 v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAG 99 (101)
T ss_dssp EEEES-H-HHHHHHHHTT
T ss_pred EEEEcCH-HHHHHHHHcC
Confidence 9999875 5555666554
No 160
>TIGR02052 MerP mercuric transport protein periplasmic component. This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).
Probab=91.99 E-value=0.76 Score=40.05 Aligned_cols=65 Identities=32% Similarity=0.481 Sum_probs=49.7
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
+..+.+.|+.|..|...++..+...+++....++....+..+.++...... ..+...+++.||..
T Consensus 24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~ 88 (92)
T TIGR02052 24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNV--------KALTEATTDAGYPS 88 (92)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCH--------HHHHHHHHhcCCCe
Confidence 456779999999999999999999999988999998888777765432222 34445556677764
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=91.50 E-value=0.48 Score=52.79 Aligned_cols=102 Identities=10% Similarity=0.167 Sum_probs=67.1
Q ss_pred CCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCC--CceeEeccChhhH
Q 002310 703 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA---SLVGIP--KDKVLSGVKPNEK 777 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA---~~~GI~--~~~v~ar~~Pe~K 777 (937)
....+++..||++. -.+.+=|++.++|+.|++.|++++++|+....+...++ +.+|+. .+.|+.... -.
T Consensus 27 ~~~~~~~D~DGtl~----~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~--~~ 100 (311)
T PLN02645 27 SVETFIFDCDGVIW----KGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF--AA 100 (311)
T ss_pred hCCEEEEeCcCCeE----eCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH--HH
Confidence 45567777787654 35667799999999999999999999999977776666 567874 224432221 11
Q ss_pred HHHHHHHhc-CCCEEEEEcCCcccHHHHHhCCeeE
Q 002310 778 KRFINELQN-DENVVAMVGDGINDAAALASSHIGV 811 (937)
Q Consensus 778 ~~iV~~Lq~-~G~~VamvGDG~NDa~AL~~AdVGI 811 (937)
...++...- .++. .++++...|..+++.+++=+
T Consensus 101 ~~~l~~~~~~~~~~-V~viG~~~~~~~l~~~Gi~~ 134 (311)
T PLN02645 101 AAYLKSINFPKDKK-VYVIGEEGILEELELAGFQY 134 (311)
T ss_pred HHHHHhhccCCCCE-EEEEcCHHHHHHHHHCCCEE
Confidence 222222211 1344 55555678999999887644
No 162
>PHA02597 30.2 hypothetical protein; Provisional
Probab=91.21 E-value=0.6 Score=48.06 Aligned_cols=86 Identities=16% Similarity=0.214 Sum_probs=55.5
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-------ceeEeccChhhHHHHHH-HHhcCC-CEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK-------DKVLSGVKPNEKKRFIN-ELQNDE-NVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~-------~~v~ar~~Pe~K~~iV~-~Lq~~G-~~Vamv 794 (937)
++.|++.++++.|++.+ +.+++|.-+..+....-+.+++.. ..+.++.... |-++++ .+++.| ..++||
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~-kp~~~~~a~~~~~~~~~v~v 151 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDES-KEKLFIKAKEKYGDRVVCFV 151 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcc-cHHHHHHHHHHhCCCcEEEe
Confidence 47899999999999875 566777654445444556666631 1222333221 334333 333333 458899
Q ss_pred cCCcccHHHHHhC--CeeE
Q 002310 795 GDGINDAAALASS--HIGV 811 (937)
Q Consensus 795 GDG~NDa~AL~~A--dVGI 811 (937)
||..+|..|-++| ++-.
T Consensus 152 gDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred CCCHHHHHHHHHHHcCCcE
Confidence 9999999999999 8854
No 163
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=90.61 E-value=0.61 Score=47.45 Aligned_cols=84 Identities=14% Similarity=0.197 Sum_probs=61.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec---------cChhhH--HHHHHHHhcCCCE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG---------VKPNEK--KRFINELQNDENV 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar---------~~Pe~K--~~iV~~Lq~~G~~ 790 (937)
++.+++.++++.|+ .+++++|.-+...+..+.+..|+.. +.+++. ..|+.. ..+++.+......
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 47789999999998 4799999998999999999999842 233332 244322 3344444444567
Q ss_pred EEEEcCCcccHHHHHhCCee
Q 002310 791 VAMVGDGINDAAALASSHIG 810 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVG 810 (937)
++||||...|..+-++|++-
T Consensus 161 ~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCE
Confidence 89999999999988888764
No 164
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.56 E-value=0.93 Score=46.64 Aligned_cols=91 Identities=22% Similarity=0.231 Sum_probs=66.9
Q ss_pred cCChhHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCC-------------------------ceeEeccCh-hh
Q 002310 724 RIRDDAAHVVNSLSSQGI-GVYMLSGDKKNSAEYVASLVGIPK-------------------------DKVLSGVKP-NE 776 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI-~v~mlTGD~~~tA~~iA~~~GI~~-------------------------~~v~ar~~P-e~ 776 (937)
|+-|+..++|+.+++.|- .++++|--|.---..+-+..||.. .+-+.++-| -=
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 677899999999999996 999999999998889999988720 011222222 24
Q ss_pred HHHHHHHHhcCC-------CEEEEEcCCcccH-HHHHhCCeeEEeC
Q 002310 777 KKRFINELQNDE-------NVVAMVGDGINDA-AALASSHIGVAMG 814 (937)
Q Consensus 777 K~~iV~~Lq~~G-------~~VamvGDG~NDa-~AL~~AdVGIamg 814 (937)
|..++..++..+ .++-++|||.||. |.++...--++|-
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 666766665432 2799999999995 7777766666773
No 165
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=90.29 E-value=1.3 Score=55.92 Aligned_cols=62 Identities=11% Similarity=0.143 Sum_probs=47.9
Q ss_pred HHhCCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHH
Q 002310 699 EDLMNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSL-SSQGIGVYMLSGDKKNSAEYVASL 760 (937)
Q Consensus 699 ~~~~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L-~~aGI~v~mlTGD~~~tA~~iA~~ 760 (937)
+.....+.+++..||+++-.-...-.+-++..+++++| ++.|+.|+++||....+....-..
T Consensus 591 y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 591 YKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred HHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 44445688889999998844333335668999999997 778999999999999988776644
No 166
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=90.23 E-value=0.74 Score=47.58 Aligned_cols=88 Identities=17% Similarity=0.265 Sum_probs=58.1
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCCC--cee-Eec----cChhhH--HHHHHHHhcCCCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA-SLVGIPK--DKV-LSG----VKPNEK--KRFINELQNDENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA-~~~GI~~--~~v-~ar----~~Pe~K--~~iV~~Lq~~G~~Vam 793 (937)
++.|++.++++.|++.|+++.++|.-+.......- +..++.. +.+ .+. ..|+-. ..+++.+.-....+.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 47899999999999999999999987766554332 2224321 122 221 234221 2334444334467899
Q ss_pred EcCCcccHHHHHhCCeeE
Q 002310 794 VGDGINDAAALASSHIGV 811 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGI 811 (937)
|||...|+.+-++|++-.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 164 FDDNADNIEAANALGITS 181 (199)
T ss_pred eCCCHHHHHHHHHcCCEE
Confidence 999999999999988843
No 167
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=90.19 E-value=1.2 Score=47.76 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=51.4
Q ss_pred HHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcC----CCEEEEEcCCcccHHH
Q 002310 729 AAHVVNSLSSQGIGVYML-SGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQND----ENVVAMVGDGINDAAA 803 (937)
Q Consensus 729 a~e~I~~L~~aGI~v~ml-TGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~----G~~VamvGDG~NDa~A 803 (937)
..+.-+.|++.|+++.++ +++.. + ++.- ....|...|+.|+++ -..|..+||..||.+|
T Consensus 133 ~~~i~~~l~~~~l~~~~i~s~~~~---------l-----dilP--~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~m 196 (247)
T PF05116_consen 133 LEEIRARLRQRGLRVNVIYSNGRD---------L-----DILP--KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEM 196 (247)
T ss_dssp HHHHHHHHHCCTCEEEEEECTCCE---------E-----EEEE--TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHH
T ss_pred HHHHHHHHHHcCCCeeEEEcccee---------E-----EEcc--CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHH
Confidence 455556678999998766 33321 1 1211 224688888888765 2357779999999999
Q ss_pred HHhCCeeEEeCCChHH
Q 002310 804 LASSHIGVAMGGGVGA 819 (937)
Q Consensus 804 L~~AdVGIamg~gt~~ 819 (937)
|..++-||.++++...
T Consensus 197 L~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 197 LEGGDHGVVVGNAQPE 212 (247)
T ss_dssp HCCSSEEEE-TTS-HH
T ss_pred HcCcCCEEEEcCCCHH
Confidence 9999999999977666
No 168
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=90.13 E-value=0.55 Score=49.33 Aligned_cols=88 Identities=16% Similarity=0.154 Sum_probs=62.4
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEec-c----Ch--hhHHHHHHHHhcCCCEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSG-V----KP--NEKKRFINELQNDENVVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar-~----~P--e~K~~iV~~Lq~~G~~Va 792 (937)
-++.|+++++++.| ++++.++|+.....+...-+..|+.. +.+++. - .| +-=....+.+.-....++
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 35678999999998 49999999999888888888888852 123332 1 22 222333333333345799
Q ss_pred EEcCCcccHHHHHhCCeeEEe
Q 002310 793 MVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 793 mvGDG~NDa~AL~~AdVGIam 813 (937)
||||..+|..+-++|++-+..
T Consensus 164 ~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEE
Confidence 999999999999999987653
No 169
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=88.97 E-value=1.1 Score=45.67 Aligned_cols=84 Identities=15% Similarity=0.133 Sum_probs=59.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--ceeEec-----cChhh--HHHHHHHHhcCCCEEEEEc
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKVLSG-----VKPNE--KKRFINELQNDENVVAMVG 795 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v~ar-----~~Pe~--K~~iV~~Lq~~G~~VamvG 795 (937)
+-|+ .++++.|++. +++.++|+.....+..+-+..|+.. +.+++. -.|+. =....+.++-....+.|||
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ig 166 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFE 166 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEe
Confidence 3454 6899999875 8999999999999999999999852 233322 12322 2333444443345688999
Q ss_pred CCcccHHHHHhCCee
Q 002310 796 DGINDAAALASSHIG 810 (937)
Q Consensus 796 DG~NDa~AL~~AdVG 810 (937)
|..+|+.+-++|++-
T Consensus 167 Ds~~di~aA~~aG~~ 181 (188)
T PRK10725 167 DADFGIQAARAAGMD 181 (188)
T ss_pred ccHhhHHHHHHCCCE
Confidence 999999999998874
No 170
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=87.84 E-value=0.53 Score=49.95 Aligned_cols=80 Identities=20% Similarity=0.340 Sum_probs=58.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCC-ceeEeccCh--------hhHHHHHHHHhcCCC-E
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKN---SAEYVASLVGIPK-DKVLSGVKP--------NEKKRFINELQNDEN-V 790 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~---tA~~iA~~~GI~~-~~v~ar~~P--------e~K~~iV~~Lq~~G~-~ 790 (937)
+.=|++.+.++.+++.|++|..|||-+.. ....--++.|... +.++-|-.. +-|...-+.++++|+ +
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I 194 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI 194 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE
Confidence 55578999999999999999999986543 4444556778754 445444322 238888888888865 7
Q ss_pred EEEEcCCcccHHH
Q 002310 791 VAMVGDGINDAAA 803 (937)
Q Consensus 791 VamvGDG~NDa~A 803 (937)
++++||-.+|...
T Consensus 195 i~~iGD~~~D~~~ 207 (229)
T PF03767_consen 195 IANIGDQLSDFSG 207 (229)
T ss_dssp EEEEESSGGGCHC
T ss_pred EEEeCCCHHHhhc
Confidence 7889999999754
No 171
>PRK10444 UMP phosphatase; Provisional
Probab=85.87 E-value=2.1 Score=46.11 Aligned_cols=102 Identities=14% Similarity=0.264 Sum_probs=66.7
Q ss_pred EEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CC--CCceeEeccChhhHHHHHHHHhcC-CCE
Q 002310 717 GLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV---GI--PKDKVLSGVKPNEKKRFINELQND-ENV 790 (937)
Q Consensus 717 G~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~---GI--~~~~v~ar~~Pe~K~~iV~~Lq~~-G~~ 790 (937)
|.+.-.+.+-|++.++|+.|++.|++++++|+....+...+++++ |+ ..++++ +|.+ ...+.|++. +.+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~---ts~~--~~~~~L~~~~~~~ 84 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFY---TSAM--ATADFLRRQEGKK 84 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEe---cHHH--HHHHHHHhCCCCE
Confidence 344556788999999999999999999999999998888877774 66 333443 4433 334445543 567
Q ss_pred EEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC
Q 002310 791 VAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~ 832 (937)
|.++|.. --...|+.++ +.+. .+.+|.|+...+
T Consensus 85 v~~~g~~-~l~~~l~~~g--~~~~------~~~~~~Vvvg~~ 117 (248)
T PRK10444 85 AYVIGEG-ALIHELYKAG--FTIT------DINPDFVIVGET 117 (248)
T ss_pred EEEEcCH-HHHHHHHHCc--CEec------CCCCCEEEEeCC
Confidence 8889872 2234455443 3321 124566766544
No 172
>COG2177 FtsX Cell division protein [Cell division and chromosome partitioning]
Probab=84.96 E-value=67 Score=35.48 Aligned_cols=23 Identities=30% Similarity=0.248 Sum_probs=20.4
Q ss_pred ChhHHHHHHHHhhcCCCceEEEe
Q 002310 137 CGGCAASVKRILESQPQVSSASV 159 (937)
Q Consensus 137 C~~Ca~~ve~~L~~~~GV~~~~V 159 (937)
-..|...+++.++..|||++++.
T Consensus 70 ~~~~~~~v~~~i~~~~gV~~v~~ 92 (297)
T COG2177 70 DQDDAALVREKIEGIPGVKSVRF 92 (297)
T ss_pred ChHHHHHHHHHHhcCCCcceEEE
Confidence 38999999999999999988764
No 173
>PLN02151 trehalose-phosphatase
Probab=84.60 E-value=8.7 Score=43.33 Aligned_cols=77 Identities=17% Similarity=0.319 Sum_probs=50.2
Q ss_pred HHHHhcCCCCcchhhHHHHHhCCCeEEEEEECCEEEEEEEecCc--CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 002310 681 DWLRSHGVDTSTFQEVEMEDLMNQSLVYVGVDNMLAGLIYVEDR--IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVA 758 (937)
Q Consensus 681 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~lG~i~l~D~--lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA 758 (937)
.|+..+-.....+++...........+++.+||+++-+.---|. +-++.+++|+.|.+ +..|.++||-.......+.
T Consensus 75 ~w~~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 75 CWIKEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred HHHHhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHc
Confidence 35544322222333333333345578888999998865543343 56789999999994 5799999998877666554
No 174
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=84.19 E-value=5.3 Score=42.98 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=40.4
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCC
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSG---DKKNSAEYVASLVGI 763 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTG---D~~~tA~~iA~~~GI 763 (937)
.+++..||++. -.+.+=+++.++|++|++.|++++++|| -.........+++|+
T Consensus 3 ~~~~D~DGtl~----~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~ 59 (249)
T TIGR01457 3 GYLIDLDGTMY----KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDI 59 (249)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 34555666654 4566667999999999999999999997 456666666666776
No 175
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=83.61 E-value=6.3 Score=42.55 Aligned_cols=79 Identities=23% Similarity=0.294 Sum_probs=55.0
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCCC-ceeEeccCh--------hhHHHHHHHHhcCC
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKN----SAEYVASLVGIPK-DKVLSGVKP--------NEKKRFINELQNDE 788 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~----tA~~iA~~~GI~~-~~v~ar~~P--------e~K~~iV~~Lq~~G 788 (937)
+.|.=|++.+..+.+++.|++|..+||-.+. |..++ ++.|... +.++-|-.. +.|...=+.+.++|
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eG 221 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEG 221 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcC
Confidence 3566789999999999999999999998854 33333 3568853 345555321 22444445556666
Q ss_pred C-EEEEEcCCcccH
Q 002310 789 N-VVAMVGDGINDA 801 (937)
Q Consensus 789 ~-~VamvGDG~NDa 801 (937)
+ +++.+||-.+|-
T Consensus 222 YrIv~~iGDq~sDl 235 (275)
T TIGR01680 222 YNIVGIIGDQWNDL 235 (275)
T ss_pred ceEEEEECCCHHhc
Confidence 5 778899999996
No 176
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=82.98 E-value=2.6 Score=45.89 Aligned_cols=60 Identities=17% Similarity=0.177 Sum_probs=50.2
Q ss_pred CCeEEEEEECCEEEEEEEecCc--CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 002310 703 NQSLVYVGVDNMLAGLIYVEDR--IR-DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK 765 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D~--lr-~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~ 765 (937)
-..++++..|++++.- +.+ +| |++.+++++|++.|+++.++|+-....+...-+++||..
T Consensus 125 ~~kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 125 PPHVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cceEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 3457778889987543 433 66 999999999999999999999988888899999999973
No 177
>PRK13748 putative mercuric reductase; Provisional
Probab=82.07 E-value=3.5 Score=49.94 Aligned_cols=67 Identities=34% Similarity=0.510 Sum_probs=53.1
Q ss_pred EEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccccccC
Q 002310 129 ILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSLRDM 204 (937)
Q Consensus 129 ~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 204 (937)
.+.++||+|.+|...++..+...+++..+.+++..++..+.+++. ... +.+...+++.||...+...
T Consensus 3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~-~~~--------~~i~~~i~~~g~~~~~~~~ 69 (561)
T PRK13748 3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVG-TSP--------DALTAAVAGLGYRATLADA 69 (561)
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCC-CCH--------HHHHHHHHHcCCeeeccCc
Confidence 466899999999999999999999999999999999988877542 222 4455667888998665544
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=81.47 E-value=4.4 Score=43.84 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=52.0
Q ss_pred EEEEECCEEEEEEEecCc----CChhHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCC--CceeEeccChhhH
Q 002310 707 VYVGVDNMLAGLIYVEDR----IRDDAAHVVNSLSSQGIGVYMLSGDKKNS---AEYVASLVGIP--KDKVLSGVKPNEK 777 (937)
Q Consensus 707 ~~v~~~~~~lG~i~l~D~----lr~~a~e~I~~L~~aGI~v~mlTGD~~~t---A~~iA~~~GI~--~~~v~ar~~Pe~K 777 (937)
+++..||++. -.+. +=|++.++|++|+++|++++++||....+ .....+++|++ .++++ +|.+
T Consensus 4 i~~D~DGtl~----~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~---ts~~- 75 (257)
T TIGR01458 4 VLLDISGVLY----ISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVF---TPAP- 75 (257)
T ss_pred EEEeCCCeEE----eCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeE---cHHH-
Confidence 4455566553 4455 78899999999999999999999977665 44444567874 22332 3322
Q ss_pred HHHHHHHhcCCCEEEEEcC
Q 002310 778 KRFINELQNDENVVAMVGD 796 (937)
Q Consensus 778 ~~iV~~Lq~~G~~VamvGD 796 (937)
.....|++.+..+..+|.
T Consensus 76 -~~~~~l~~~~~~~~~~g~ 93 (257)
T TIGR01458 76 -AARQLLEEKQLRPMLLVD 93 (257)
T ss_pred -HHHHHHHhcCCCeEEEEC
Confidence 234455555555555554
No 179
>PLN03138 Protein TOC75; Provisional
Probab=81.41 E-value=1.6 Score=53.83 Aligned_cols=15 Identities=13% Similarity=-0.004 Sum_probs=8.7
Q ss_pred HHhhcCCCceEEEee
Q 002310 146 RILESQPQVSSASVN 160 (937)
Q Consensus 146 ~~L~~~~GV~~~~Vn 160 (937)
--|+++.|-++..|+
T Consensus 137 ~~~~~~~~~~~~~vs 151 (796)
T PLN03138 137 VPLSKLSGFKRYKVS 151 (796)
T ss_pred EechhcCCcceEEEE
Confidence 346666776555554
No 180
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=80.57 E-value=2.9 Score=44.55 Aligned_cols=84 Identities=15% Similarity=0.236 Sum_probs=54.6
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC--cee-Eec----cChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK--DKV-LSG----VKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~--~~v-~ar----~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++-||+.++++.|++. +++.++|.-+.. .+..|+.. +.+ .+. ..|.-. ....+.+.-....+.||
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V 186 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV 186 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence 4668999999999975 899999975544 25677742 122 222 233322 22233333334579999
Q ss_pred cCC-cccHHHHHhCCeeEEe
Q 002310 795 GDG-INDAAALASSHIGVAM 813 (937)
Q Consensus 795 GDG-~NDa~AL~~AdVGIam 813 (937)
||. ..|+.+-++|++-...
T Consensus 187 GD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 187 GDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred cCCcHHHHHHHHHCCCeEEE
Confidence 999 5999999998875443
No 181
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=80.51 E-value=4.8 Score=44.07 Aligned_cols=97 Identities=15% Similarity=0.232 Sum_probs=62.0
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHcCCCC--ceeEeccChhhHHHH
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEY---VASLVGIPK--DKVLSGVKPNEKKRF 780 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~---iA~~~GI~~--~~v~ar~~Pe~K~~i 780 (937)
.+.+..||++. -.+.+=|++.++|++|++.|++++++|+....+... --+++|+.. ++++ +|..- .
T Consensus 4 ~~~~D~DGtl~----~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~---ts~~~--~ 74 (279)
T TIGR01452 4 GFIFDCDGVLW----LGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLF---SSALC--A 74 (279)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe---cHHHH--H
Confidence 45566677663 357777889999999999999999999965433322 335678742 2332 22221 2
Q ss_pred HHHHhc---CCCEEEEEcCCcccHHHHHhCCeeEE
Q 002310 781 INELQN---DENVVAMVGDGINDAAALASSHIGVA 812 (937)
Q Consensus 781 V~~Lq~---~G~~VamvGDG~NDa~AL~~AdVGIa 812 (937)
.+.|++ .+..|.++|+. .....++.+++-+.
T Consensus 75 ~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 75 ARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred HHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 234444 35789999985 34566776665543
No 182
>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.
Probab=80.49 E-value=7.9 Score=27.89 Aligned_cols=42 Identities=40% Similarity=0.631 Sum_probs=34.8
Q ss_pred EecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecC
Q 002310 131 DVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVS 172 (937)
Q Consensus 131 ~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~ 172 (937)
.+.++.|..|...++..+...+++.....++......+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (63)
T cd00371 3 SVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDP 44 (63)
T ss_pred eECCeEcHHHHHHHHHHHhcCCCEeEEEEEccCCEEEEEECC
Confidence 468899999999999999999998888888877776666643
No 183
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.03 E-value=1.1 Score=44.94 Aligned_cols=89 Identities=8% Similarity=0.093 Sum_probs=62.1
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC---ceeEeccC-hhhHHHHHHHHhcCC---CEEEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK---DKVLSGVK-PNEKKRFINELQNDE---NVVAMV 794 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~---~~v~ar~~-Pe~K~~iV~~Lq~~G---~~Vamv 794 (937)
.=..||++.+.++.|++. +++++.|--.+..|..+.+.++... ..+++|-. ...|-.+++.|..-| ..|.||
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEE
Confidence 336899999999999987 9999999999999999999999754 12333311 111222455554433 579999
Q ss_pred cCCcccHHHHHhCCeeEEe
Q 002310 795 GDGINDAAALASSHIGVAM 813 (937)
Q Consensus 795 GDG~NDa~AL~~AdVGIam 813 (937)
||...|..+=.++ ||-+
T Consensus 119 DD~~~~~~~~~~N--gI~i 135 (162)
T TIGR02251 119 DNSPYSYSLQPDN--AIPI 135 (162)
T ss_pred eCChhhhccCccC--Eeec
Confidence 9988887544444 4544
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=79.51 E-value=6.1 Score=47.09 Aligned_cols=103 Identities=13% Similarity=0.226 Sum_probs=65.8
Q ss_pred CeEEEEEECCEEEEE----EEecC--c---CChhHHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcC
Q 002310 704 QSLVYVGVDNMLAGL----IYVED--R---IRDDAAHVVNSLSSQGIGVYMLSGDKK------------NSAEYVASLVG 762 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~----i~l~D--~---lr~~a~e~I~~L~~aGI~v~mlTGD~~------------~tA~~iA~~~G 762 (937)
..++++..|++++-. ....| . +-|++.+.++.|++.|++++++|.-.. ..+..+.+++|
T Consensus 168 ~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lg 247 (526)
T TIGR01663 168 EKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLG 247 (526)
T ss_pred CcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcC
Confidence 356777888877632 11222 1 468999999999999999999997444 35778899999
Q ss_pred CCCceeEecc-----ChhhHHHHHHHHhcCC-------CEEEEEcCCcccHHHHHhC
Q 002310 763 IPKDKVLSGV-----KPNEKKRFINELQNDE-------NVVAMVGDGINDAAALASS 807 (937)
Q Consensus 763 I~~~~v~ar~-----~Pe~K~~iV~~Lq~~G-------~~VamvGDG~NDa~AL~~A 807 (937)
+.-+.++|-- .|.- ..+-..+++.+ ....||||-..|..+-+.|
T Consensus 248 ipfdviia~~~~~~RKP~p-Gm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~a 303 (526)
T TIGR01663 248 VPFQVFIAIGAGFYRKPLT-GMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAA 303 (526)
T ss_pred CceEEEEeCCCCCCCCCCH-HHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhc
Confidence 8644333211 1211 11222233322 3688999999998664433
No 185
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=78.72 E-value=5 Score=42.01 Aligned_cols=53 Identities=21% Similarity=0.343 Sum_probs=42.8
Q ss_pred EEEECCEEEEEEEecCc-CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 708 YVGVDNMLAGLIYVEDR-IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 708 ~v~~~~~~lG~i~l~D~-lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
+...||+++. .|. .-+.++++|+.|++.|++++++||-....+..+.+++|+.
T Consensus 3 ~~DlDGTLL~----~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 3 FSDLDGTLLD----SHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEeCCCCCcC----CCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455676642 233 3345899999999999999999999999999999999985
No 186
>KOG1456 consensus Heterogeneous nuclear ribonucleoprotein L (contains RRM repeats) [RNA processing and modification]
Probab=78.02 E-value=6.6 Score=43.30 Aligned_cols=44 Identities=16% Similarity=0.128 Sum_probs=36.5
Q ss_pred EEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeec
Q 002310 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPV 171 (937)
Q Consensus 128 ~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d 171 (937)
..++|.|++=.--...+-++|++-.-|..+.+-+..+.+.|+++
T Consensus 32 pvvhvr~l~~~v~eadl~eal~~fG~i~yvt~~P~~r~alvefe 75 (494)
T KOG1456|consen 32 PVVHVRGLHQGVVEADLVEALSNFGPIAYVTCMPHKRQALVEFE 75 (494)
T ss_pred ceEEEeccccccchhHHHHHHhcCCceEEEEeccccceeeeeec
Confidence 45778887766666777788999999999999999999999885
No 187
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=77.83 E-value=8.2 Score=38.85 Aligned_cols=81 Identities=14% Similarity=0.217 Sum_probs=53.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCC----------CceeEeccChhhHHHHHHHHhcC----C
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLS-GDKKNSAEYVASLVGIP----------KDKVLSGVKPNEKKRFINELQND----E 788 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlT-GD~~~tA~~iA~~~GI~----------~~~v~ar~~Pe~K~~iV~~Lq~~----G 788 (937)
.+-|+++++++.|++.|+++.+.| -|.+..|+++-+.++|. ..--+-+.-|..|..-.+.++++ -
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y 124 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPY 124 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---G
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCCh
Confidence 356899999999999999999999 68999999999999997 22233556688898888888764 2
Q ss_pred CEEEEEcCCcccHHHH
Q 002310 789 NVVAMVGDGINDAAAL 804 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL 804 (937)
..+++.=|-.......
T Consensus 125 ~eMlFFDDe~~N~~~v 140 (169)
T PF12689_consen 125 EEMLFFDDESRNIEVV 140 (169)
T ss_dssp GGEEEEES-HHHHHHH
T ss_pred hHEEEecCchhcceee
Confidence 2466665544433333
No 188
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=77.77 E-value=13 Score=44.22 Aligned_cols=88 Identities=15% Similarity=0.133 Sum_probs=62.7
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCc-----------eeEec------cChhhHHHHHHHHh
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPKD-----------KVLSG------VKPNEKKRFINELQ 785 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~-~GI~~~-----------~v~ar------~~Pe~K~~iV~~Lq 785 (937)
.+++++.+.+ ++.|. ++++|+=...-++.+|++ +|++.- .+-.+ +.=++|.+-++...
T Consensus 110 ~l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~ 185 (497)
T PLN02177 110 DVHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEF 185 (497)
T ss_pred hcCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHh
Confidence 3777766544 56674 499999999999999987 898620 01111 23356888887543
Q ss_pred cCCCEEEEEcCCcccHHHHHhCCeeEEeCC
Q 002310 786 NDENVVAMVGDGINDAAALASSHIGVAMGG 815 (937)
Q Consensus 786 ~~G~~VamvGDG~NDa~AL~~AdVGIamg~ 815 (937)
.......+-||..||.|+|+.||-...++.
T Consensus 186 g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 186 GDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 222223678999999999999999999985
No 189
>PRK14054 methionine sulfoxide reductase A; Provisional
Probab=76.64 E-value=3.5 Score=41.54 Aligned_cols=40 Identities=18% Similarity=0.134 Sum_probs=36.1
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCCe-------------------eEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTET-------------------AIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~-------------------~~V~~d~~~~~~ 177 (937)
++|=|-+|..+.+++||.++.|-++.+. +.|.|||+.++.
T Consensus 10 gGCFWg~E~~f~~~~GV~~t~vGYagG~~~~PtY~~Vcsg~tgh~E~V~V~yDp~~isy 68 (172)
T PRK14054 10 GGCFWGMEAPFDRVKGVISTRVGYTGGHVENPTYEQVCSGTTGHAEAVEITYDPAVISY 68 (172)
T ss_pred cCChhhhHHHHccCCCEEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCH
Confidence 5899999999999999999999887765 889999999986
No 190
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=75.12 E-value=8.1 Score=41.74 Aligned_cols=111 Identities=8% Similarity=0.041 Sum_probs=66.3
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHH-------------HHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEE
Q 002310 726 RDDAAHVVNSLSSQGIGVYMLSGDKKNSA-------------EYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVA 792 (937)
Q Consensus 726 r~~a~e~I~~L~~aGI~v~mlTGD~~~tA-------------~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~Va 792 (937)
-++..++++.|++.+++..+.|+...... ..+....|... .++..-.|+-=..+++.+......+.
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~-~~~gKP~p~~~~~~~~~~~~~~~~~~ 200 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKA-TVVGKPSKTFFLEALRATGCEPEEAV 200 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCc-eeecCCCHHHHHHHHHHhCCChhhEE
Confidence 36788999999999999999987554322 22222333321 22333333333445555544557899
Q ss_pred EEcCCc-ccHHHHHhCCeeE-EeCCCh---H-H--HHhhcCEEEeCCChhHHHHH
Q 002310 793 MVGDGI-NDAAALASSHIGV-AMGGGV---G-A--ASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 793 mvGDG~-NDa~AL~~AdVGI-amg~gt---~-~--a~~aADivL~~~~l~~l~~~ 839 (937)
||||.. +|..+-+.+.+-- .+..|. + . ....+|.++ +++..+...
T Consensus 201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 201 MIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred EECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 999996 9999888887743 333332 1 1 123467666 457666543
No 191
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=72.85 E-value=22 Score=35.27 Aligned_cols=88 Identities=18% Similarity=0.208 Sum_probs=64.8
Q ss_pred cCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHc-----CCCCc---------------eeEeccChhhHH
Q 002310 722 EDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE---YVASLV-----GIPKD---------------KVLSGVKPNEKK 778 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~---~iA~~~-----GI~~~---------------~v~ar~~Pe~K~ 778 (937)
.|..++++.+..+.+++.|++++-||+-...-+. ..-++. ++++- ++..+-.-+.|.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHHH
Confidence 3789999999999999999999999998855443 333333 55432 233333456888
Q ss_pred HHHHHHhcC-----CCEEEEEcCCcccHHHHHhCCe
Q 002310 779 RFINELQND-----ENVVAMVGDGINDAAALASSHI 809 (937)
Q Consensus 779 ~iV~~Lq~~-----G~~VamvGDG~NDa~AL~~AdV 809 (937)
..++.+++. ...++.-|.-.+|+.|-+++.|
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 888988864 3467778888999999987765
No 192
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=72.74 E-value=12 Score=39.41 Aligned_cols=91 Identities=18% Similarity=0.153 Sum_probs=71.2
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---eeE------eccChhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---KVL------SGVKPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---~v~------ar~~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
.++.|++.+.++.|++.|+.+.+.|+-....+..+.+.+|+... .|. ..=.|+-=+.-.+.|.-....+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cvv 164 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVV 164 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEE
Confidence 48899999999999999999999999999999999999998521 111 122344445555555445678999
Q ss_pred EcCCcccHHHHHhCCeeEEe
Q 002310 794 VGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 794 vGDG~NDa~AL~~AdVGIam 813 (937)
+.|..|.+.|-++|..-+-.
T Consensus 165 iEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 165 VEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred EecchhHHHHHHHCCCEEEE
Confidence 99999999999999876533
No 193
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=72.29 E-value=14 Score=38.63 Aligned_cols=112 Identities=22% Similarity=0.243 Sum_probs=68.9
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---eeE----eccChhhHHHHHHHHhcC---CCEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---KVL----SGVKPNEKKRFINELQND---ENVVAM 793 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---~v~----ar~~Pe~K~~iV~~Lq~~---G~~Vam 793 (937)
++-+++.++++.|++. +++.++|--.........+++||... .+. ....|+.+ -.-..+++. ...++|
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~-~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPE-IFEYALEKLGVPPEEALF 176 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcH-HHHHHHHHcCCCcceEEE
Confidence 6678899999999988 99999998778888889999997421 122 23455444 333344444 457999
Q ss_pred EcCC-ccc-HHHHHhCCeeEEeC-CCh---HHHHhhcCEEEeCCChhHHHHHH
Q 002310 794 VGDG-IND-AAALASSHIGVAMG-GGV---GAASEVASVVLMGNRLSQLLVAL 840 (937)
Q Consensus 794 vGDG-~ND-a~AL~~AdVGIamg-~gt---~~a~~aADivL~~~~l~~l~~~i 840 (937)
|||. .|| .+|.+.-=-+|-+. .+. +.. ...|..+ .++..+..++
T Consensus 177 VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~-~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 177 VGDSLENDILGARALGMKTVWINRGGKPLPDAL-EAPDYEI--SSLAELLDLL 226 (229)
T ss_pred ECCChhhhhHHHHhcCcEEEEECCCCCCCCCCc-cCCceEE--cCHHHHHHHH
Confidence 9996 777 44444333344444 221 112 3455444 3466555554
No 194
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=71.16 E-value=3.7 Score=41.12 Aligned_cols=77 Identities=18% Similarity=0.125 Sum_probs=53.2
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc---eeEec----cChhhH--HHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD---KVLSG----VKPNEK--KRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~---~v~ar----~~Pe~K--~~iV~~Lq~~G~~Vamv 794 (937)
++.|++.++++ ++.++|.-+......+-+..|+..- .+.+. ..|+-. ....+.+.-....+.||
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 57899999998 3779999888888888999998521 12222 233332 44445554445679999
Q ss_pred cCCcccHHHHHhC
Q 002310 795 GDGINDAAALASS 807 (937)
Q Consensus 795 GDG~NDa~AL~~A 807 (937)
||...|..+-+++
T Consensus 163 gD~~~Di~~A~~~ 175 (175)
T TIGR01493 163 AAHQWDLIGARKF 175 (175)
T ss_pred ecChhhHHHHhcC
Confidence 9999998776653
No 195
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=70.53 E-value=12 Score=38.11 Aligned_cols=88 Identities=13% Similarity=0.171 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcC---CC--HHHH----------HHHHHHcCCC-CceeEeccChhh--------HHHH
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSG---DK--KNSA----------EYVASLVGIP-KDKVLSGVKPNE--------KKRF 780 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTG---D~--~~tA----------~~iA~~~GI~-~~~v~ar~~Pe~--------K~~i 780 (937)
+.+++.+++..|+++|++++|+|- .. ..+. ..+-++.|+. ....+|.-.|++ ...+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~ 111 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGML 111 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHH
Confidence 568999999999999999999994 11 1111 1222333421 124555555654 2345
Q ss_pred HHHHhcCC---CEEEEEcCCcccHHHHHhCCeeEEe
Q 002310 781 INELQNDE---NVVAMVGDGINDAAALASSHIGVAM 813 (937)
Q Consensus 781 V~~Lq~~G---~~VamvGDG~NDa~AL~~AdVGIam 813 (937)
.+.+++.+ ....||||-..|..+-..|++. .+
T Consensus 112 ~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 112 LSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred HHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 55555554 6789999999999999988887 55
No 196
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=70.52 E-value=36 Score=37.04 Aligned_cols=105 Identities=18% Similarity=0.276 Sum_probs=69.0
Q ss_pred EEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CC--CceeEeccChhhHHHHHHHHhcC--C
Q 002310 717 GLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG----IP--KDKVLSGVKPNEKKRFINELQND--E 788 (937)
Q Consensus 717 G~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~G----I~--~~~v~ar~~Pe~K~~iV~~Lq~~--G 788 (937)
|.+.-.+.+=|++.++|++|+++|++++.+|--...+...+++++. ++ .+.++ ++-+ .....++++ +
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~---TS~~--at~~~l~~~~~~ 91 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIV---TSGD--ATADYLAKQKPG 91 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHee---cHHH--HHHHHHHhhCCC
Confidence 5666888999999999999999999999999988888775555432 21 12232 1111 122334333 3
Q ss_pred CEEEEEcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCC
Q 002310 789 NVVAMVGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGN 831 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~ 831 (937)
.+|.++|. -.+...|+.+++-+.-.... ...|.|+...
T Consensus 92 ~kv~viG~-~~l~~~l~~~G~~~~~~~~~----~~~d~Vv~g~ 129 (269)
T COG0647 92 KKVYVIGE-EGLKEELEGAGFELVDEEEP----ARVDAVVVGL 129 (269)
T ss_pred CEEEEECC-cchHHHHHhCCcEEeccCCC----CcccEEEEec
Confidence 69999994 45667888888877653221 1156666643
No 197
>PLN03138 Protein TOC75; Provisional
Probab=70.06 E-value=6.9 Score=48.43 Aligned_cols=13 Identities=31% Similarity=0.511 Sum_probs=7.8
Q ss_pred HHHHHHHhcCccc
Q 002310 187 ALAKHLTSCGFKS 199 (937)
Q Consensus 187 ~i~~~i~~~Gy~~ 199 (937)
+..+.|.+.||-.
T Consensus 189 ~dv~~I~~tG~F~ 201 (796)
T PLN03138 189 KELETLASCGMFE 201 (796)
T ss_pred HHHHHHHhcCCce
Confidence 3455566788744
No 198
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=69.46 E-value=11 Score=41.33 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=47.7
Q ss_pred CeEEEEEECCEEEEEEEecCc--CC-hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 704 QSLVYVGVDNMLAGLIYVEDR--IR-DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~--lr-~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
..++++..|++++-- +++ +| |++.+++++|+++|+++.++|+-....+..+.+.+|+.
T Consensus 128 ~~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 128 PHVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred ccEEEEecCCCccCC---CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 356777778887543 444 46 99999999999999999999977777889999999996
No 199
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=68.68 E-value=11 Score=37.57 Aligned_cols=88 Identities=18% Similarity=0.306 Sum_probs=64.3
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCc--eeEeccChh-hHHHHHHHHhcCCCEEEEEcCC
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKK----NSAEYVASLVGIPKD--KVLSGVKPN-EKKRFINELQNDENVVAMVGDG 797 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~----~tA~~iA~~~GI~~~--~v~ar~~Pe-~K~~iV~~Lq~~G~~VamvGDG 797 (937)
+++-+++.|..-++.|=+|+.+||..+ .++..+|+...|.+. ..|+.-.|. .+..-...+|+++ .-..-||.
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~-~~IhYGDS 193 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKPKPGQYTKTQWIQDKN-IRIHYGDS 193 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCCCcccccccHHHHhcC-ceEEecCC
Confidence 567788899999999999999999875 466778888888532 567766661 2233345566665 44678999
Q ss_pred cccHHHHHhCCe-eEEe
Q 002310 798 INDAAALASSHI-GVAM 813 (937)
Q Consensus 798 ~NDa~AL~~AdV-GIam 813 (937)
-||.-|-+.|.+ ||-+
T Consensus 194 D~Di~AAkeaG~RgIRi 210 (237)
T COG3700 194 DNDITAAKEAGARGIRI 210 (237)
T ss_pred chhhhHHHhcCccceeE
Confidence 999999998876 5544
No 200
>PRK05528 methionine sulfoxide reductase A; Provisional
Probab=68.55 E-value=7.6 Score=38.45 Aligned_cols=40 Identities=18% Similarity=0.250 Sum_probs=34.2
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCC--------------eeEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTE--------------TAIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~--------------~~~V~~d~~~~~~ 177 (937)
++|=|-+|..+.+++||.+++|-++.+ .+.|.|||..++.
T Consensus 8 gGCFWg~E~~f~~l~GV~~t~vGYagG~~~~p~~~~tgH~E~V~V~yDp~~isy 61 (156)
T PRK05528 8 GGCLWGVQAFFKTLPGVIHTEAGRANGRTSTLDGPYDGYAECVKTHFDPRMVSI 61 (156)
T ss_pred cCCchhhHHHHhcCCCEEEEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCcCCH
Confidence 589999999999999999999876542 2778999999886
No 201
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=66.67 E-value=22 Score=39.71 Aligned_cols=86 Identities=17% Similarity=0.263 Sum_probs=55.4
Q ss_pred EEEEecCcCChhHHHHHHHHHhC----CCeEEEEcCCC---HH-HHHHHHHHcCCCC--ceeEeccChhhHHHHHHHHhc
Q 002310 717 GLIYVEDRIRDDAAHVVNSLSSQ----GIGVYMLSGDK---KN-SAEYVASLVGIPK--DKVLSGVKPNEKKRFINELQN 786 (937)
Q Consensus 717 G~i~l~D~lr~~a~e~I~~L~~a----GI~v~mlTGD~---~~-tA~~iA~~~GI~~--~~v~ar~~Pe~K~~iV~~Lq~ 786 (937)
|++.-.+++-+++.++++.|++. |+++..+|-.. .. .+..+.+++|++- ++++... ..+...+++
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~-----~~~~~ll~~ 83 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH-----SPYKSLVNK 83 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh-----HHHHHHHHH
Confidence 45567788999999999999998 99999999554 33 3666778888842 1232222 222233333
Q ss_pred CCCEEEEEcCCcccHHHHHhCC
Q 002310 787 DENVVAMVGDGINDAAALASSH 808 (937)
Q Consensus 787 ~G~~VamvGDG~NDa~AL~~Ad 808 (937)
.+.+|.++|.+. -...++.++
T Consensus 84 ~~~~v~viG~~~-~~~~l~~~G 104 (321)
T TIGR01456 84 YEKRILAVGTGS-VRGVAEGYG 104 (321)
T ss_pred cCCceEEEeChH-HHHHHHHcC
Confidence 344788898764 344555433
No 202
>PRK00058 methionine sulfoxide reductase A; Provisional
Probab=65.12 E-value=7.5 Score=40.42 Aligned_cols=40 Identities=20% Similarity=0.148 Sum_probs=35.1
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCC-------------------eeEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTE-------------------TAIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~-------------------~~~V~~d~~~~~~ 177 (937)
++|=|-+|..+.+++||.+++|-++.+ .+.|.|||..++.
T Consensus 52 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~~PtY~~VcsG~tgH~EaV~V~YDp~~ISy 110 (213)
T PRK00058 52 MGCFWGAERLFWQLPGVYSTAVGYAGGYTPNPTYREVCSGRTGHAEVVRVVYDPAVISY 110 (213)
T ss_pred ccCcchhHHHHhcCCCEEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCccCCH
Confidence 689999999999999999999988733 3789999999886
No 203
>PRK13014 methionine sulfoxide reductase A; Provisional
Probab=64.90 E-value=7.2 Score=39.77 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=35.5
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCCe-------------------eEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTET-------------------AIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~-------------------~~V~~d~~~~~~ 177 (937)
++|=|-+|....+++||.+++|-++.+. +.|.|||+.++.
T Consensus 15 gGCFWg~E~~f~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~tgH~E~V~V~yDp~~iSy 73 (186)
T PRK13014 15 GGCFWGVEGVFQHVPGVVSVVSGYSGGHVDNPTYEQVCTGTTGHAEAVQITYDPKQVSY 73 (186)
T ss_pred cCCceeeHHHHccCCCEEEEEeeecCCCCCCCChhhhcCCCCCceEEEEEEECCCcCCH
Confidence 5889999999999999999999887664 789999999886
No 204
>PF01206 TusA: Sulfurtransferase TusA; InterPro: IPR001455 SirA functions as a response regulator as part of a two-component system, where BarA is the sensor kinase. This system increases the expression of virulence genes and decreases the expression of motility genes []. BarA phosphorylates SirA, thereby activating the protein. Phosphorylated SirA directly activates virulence expression by interacting with hilA and hilC promoters, while repressing the flagellar regulon indirectly by binding to the csrB promoter, which in turn affects flagellar gene expression. Orthologues of SirA from Salmonella spp. can be found throughout proteobacteria, such as GacA in Psuedomonas spp., VarA in Vibrio cholerae, ExpA in Erwinia carotovora, LetA in Legionella pneumophila, and UvrY in Escherichia coli []. A sensor kinase for SirA is present in each of these organisms as well; the sensor kinase is known as BarA in E. coli and Salmonella spp., but has different names in other genera. In different species, SirA/BarA orthologues are required for virulence gene expression, exoenzyme and antibiotic production, motility, and biofilm formation. The structure of SirA consists of an alpha/beta sandwich with a beta-alpha-beta-alpha-beta(2) fold, comprising a mixed four-stranded beta-sheet stacked against two alpha-helices, both of which are nearly parallel to the strands of the beta-sheet []. Several uncharacterised bacterial proteins (73 to 81 amino-acid residues in length) that contain a well-conserved region in their N-terminal region show structural similarity to the SirA protein, including the E. coli protein YedF (P0AA31 from SWISSPROT), and other members of the UPF0033 family.; GO: 0016783 sulfurtransferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 3LVJ_D 3LVK_B 1DCJ_A 3HZ7_A 1JDQ_A 1JE3_A 1PAV_A.
Probab=64.37 E-value=15 Score=30.76 Aligned_cols=55 Identities=24% Similarity=0.309 Sum_probs=40.1
Q ss_pred EEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccc
Q 002310 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (937)
Q Consensus 128 ~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (937)
.++.+.|+.|+...-.+.++|++++.= ..+.|..|..... +++....++.||+..
T Consensus 1 ~~lD~rg~~CP~Pll~~~~~l~~l~~G---------~~l~v~~d~~~~~---------~di~~~~~~~g~~~~ 55 (70)
T PF01206_consen 1 KTLDLRGLSCPMPLLKAKKALKELPPG---------EVLEVLVDDPAAV---------EDIPRWCEENGYEVV 55 (70)
T ss_dssp EEEECSS-STTHHHHHHHHHHHTSGTT----------EEEEEESSTTHH---------HHHHHHHHHHTEEEE
T ss_pred CEEeCCCCCCCHHHHHHHHHHHhcCCC---------CEEEEEECCccHH---------HHHHHHHHHCCCEEE
Confidence 368899999999999999999997543 2344554443322 679999999999844
No 205
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=62.65 E-value=37 Score=29.93 Aligned_cols=31 Identities=10% Similarity=0.159 Sum_probs=13.7
Q ss_pred hHHHHHhhcCCCceEEEEecCCCCCeEEEEe
Q 002310 351 TSDMTGLLGILPSKARLLVDNDAKDSIIEVP 381 (937)
Q Consensus 351 ~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~ 381 (937)
++..+++.+.+..--.|+..+|-.|+..++.
T Consensus 28 ~k~~~~m~~~L~~Gd~VvT~gGi~G~V~~i~ 58 (84)
T TIGR00739 28 RKAHKKLIESLKKGDKVLTIGGIIGTVTKIA 58 (84)
T ss_pred HHHHHHHHHhCCCCCEEEECCCeEEEEEEEe
Confidence 3333444443333344555544444555554
No 206
>PTZ00174 phosphomannomutase; Provisional
Probab=61.72 E-value=19 Score=38.61 Aligned_cols=53 Identities=15% Similarity=0.283 Sum_probs=41.7
Q ss_pred CeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 002310 704 QSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS 759 (937)
Q Consensus 704 ~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~ 759 (937)
..++++..||+++- =..++-+.++++|+++++.|+++++.||..........+
T Consensus 5 ~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTK---PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 45677778888752 223588999999999999999999999999886655444
No 207
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=61.71 E-value=56 Score=34.71 Aligned_cols=85 Identities=19% Similarity=0.327 Sum_probs=51.4
Q ss_pred EEecCcCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHH-HHHHHcCCC--CceeEeccChhhHHHHHHHHhc--CCCE
Q 002310 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLS---GDKKNSAE-YVASLVGIP--KDKVLSGVKPNEKKRFINELQN--DENV 790 (937)
Q Consensus 719 i~l~D~lr~~a~e~I~~L~~aGI~v~mlT---GD~~~tA~-~iA~~~GI~--~~~v~ar~~Pe~K~~iV~~Lq~--~G~~ 790 (937)
+.-.+.+=+++.++|+.+++.|++++++| |-...... .+.+..|++ .+.++. |. ....+.|++ .+..
T Consensus 9 L~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iit---s~--~~~~~~l~~~~~~~~ 83 (236)
T TIGR01460 9 LWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIIT---SG--SVTKDLLRQRFEGEK 83 (236)
T ss_pred cCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeee---HH--HHHHHHHHHhCCCCE
Confidence 33456667799999999999999999999 44444333 344436763 222321 11 112233333 3567
Q ss_pred EEEEcCCcccHHHHHhCCe
Q 002310 791 VAMVGDGINDAAALASSHI 809 (937)
Q Consensus 791 VamvGDG~NDa~AL~~AdV 809 (937)
|.++|.. .....++.+++
T Consensus 84 v~v~G~~-~~~~~l~~~g~ 101 (236)
T TIGR01460 84 VYVIGVG-ELRESLEGLGF 101 (236)
T ss_pred EEEECCH-HHHHHHHHcCC
Confidence 9999964 45566766543
No 208
>PRK05550 bifunctional methionine sulfoxide reductase B/A protein; Provisional
Probab=61.34 E-value=39 Score=36.92 Aligned_cols=40 Identities=23% Similarity=0.163 Sum_probs=34.6
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCCe-------------------eEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTET-------------------AIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~-------------------~~V~~d~~~~~~ 177 (937)
++|=|-+|..+.+++||.+++|-++.++ +.|.|||..++.
T Consensus 134 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~VcsG~tgH~EaV~V~yDp~~isy 192 (283)
T PRK05550 134 GGCFWGVEYYFKKLPGVLSVESGYTGGDTKNPTYEQVCSGTTGHAEAVRVEFDPAKISY 192 (283)
T ss_pred cCCchhhhhhHhhCcCEEEEEEeeCCCCCCCCChhhcccCCCCCeEEEEEEECCccCCH
Confidence 5899999999999999999998775543 788999999886
No 209
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=60.27 E-value=4.7e+02 Score=33.55 Aligned_cols=82 Identities=22% Similarity=0.350 Sum_probs=55.9
Q ss_pred EEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc-----------eeEe-ccChhhHHHHHH
Q 002310 715 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD-----------KVLS-GVKPNEKKRFIN 782 (937)
Q Consensus 715 ~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~-----------~v~a-r~~Pe~K~~iV~ 782 (937)
.+.-+.-.+.+-.|..|.++.....|.||+-+-+-+..+- ...+...++++ -|+- ++.|+- ..+|+
T Consensus 638 ~I~~ic~p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~-~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T-~~VI~ 715 (1140)
T KOG0208|consen 638 SIAEICKPETVPADYQEVLKEYTHQGFRVIALASKELETS-TLQKAQKLSRDTVESNLEFLGLIVMENKLKEET-KRVID 715 (1140)
T ss_pred HHHHhcCcccCCccHHHHHHHHHhCCeEEEEEecCccCcc-hHHHHhhccHhhhhccceeeEEEEeeccccccc-HHHHH
Confidence 3445566777788999999999999999998877776665 44444444433 2333 344444 46778
Q ss_pred HHhcCC-CEEEEEcCCc
Q 002310 783 ELQNDE-NVVAMVGDGI 798 (937)
Q Consensus 783 ~Lq~~G-~~VamvGDG~ 798 (937)
+|++.+ ++|+.+||..
T Consensus 716 eL~~AnIRtVMcTGDNl 732 (1140)
T KOG0208|consen 716 ELNRANIRTVMCTGDNL 732 (1140)
T ss_pred HHHhhcceEEEEcCCch
Confidence 887765 4666689974
No 210
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=59.52 E-value=2.3e+02 Score=30.61 Aligned_cols=76 Identities=14% Similarity=0.260 Sum_probs=49.3
Q ss_pred CcCChhHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHcCCCCceeEe--c--------cChhhHHHHHHHHhcCCCE
Q 002310 723 DRIRDDAAHVVNSLSSQGIG-VYMLSGDK-KNSAEYVASLVGIPKDKVLS--G--------VKPNEKKRFINELQNDENV 790 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~-v~mlTGD~-~~tA~~iA~~~GI~~~~v~a--r--------~~Pe~K~~iV~~Lq~~G~~ 790 (937)
|-+-++..+.++.|++.|+. |.++|-.. .+..+.+++...= -+|+ + ..|++=.+.++.+++....
T Consensus 125 DLp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~g---fIY~vs~~GvTG~~~~~~~~~~~~i~~vk~~~~~ 201 (258)
T PRK13111 125 DLPPEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASG---FVYYVSRAGVTGARSADAADLAELVARLKAHTDL 201 (258)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCC---cEEEEeCCCCCCcccCCCccHHHHHHHHHhcCCC
Confidence 54557888899999999987 44577666 4566777776532 2322 1 2244555677777776555
Q ss_pred EEEEcCCcccH
Q 002310 791 VAMVGDGINDA 801 (937)
Q Consensus 791 VamvGDG~NDa 801 (937)
-.++|=|+++.
T Consensus 202 pv~vGfGI~~~ 212 (258)
T PRK13111 202 PVAVGFGISTP 212 (258)
T ss_pred cEEEEcccCCH
Confidence 66788888554
No 211
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=58.87 E-value=95 Score=34.16 Aligned_cols=99 Identities=24% Similarity=0.420 Sum_probs=60.0
Q ss_pred CCCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccC----hhhH
Q 002310 702 MNQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVK----PNEK 777 (937)
Q Consensus 702 ~~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~----Pe~K 777 (937)
.|...+|+.-+..=+| -.+.++++-+-|-+. +..+|+=+...++....|+..+++ |+-.++ |-|=
T Consensus 69 lGg~~~~l~~~~~Qlg-------r~Esi~DTArVLsr~-~D~I~~R~~~~~~ve~lA~~s~VP---ViNgLtD~~HP~Q~ 137 (310)
T COG0078 69 LGGHAIYLGPGDSQLG-------RGESIKDTARVLSRM-VDAIMIRGFSHETLEELAKYSGVP---VINGLTDEFHPCQA 137 (310)
T ss_pred cCCCeEEeCCCccccC-------CCCcHHHHHHHHHhh-hheEEEecccHHHHHHHHHhCCCc---eEcccccccCcHHH
Confidence 4666677665543333 233444444444443 677899999999999999999997 444443 4343
Q ss_pred HHHHHHHhc-----CCCEEEEEcCCcccHHH--HHhCCeeE
Q 002310 778 KRFINELQN-----DENVVAMVGDGINDAAA--LASSHIGV 811 (937)
Q Consensus 778 ~~iV~~Lq~-----~G~~VamvGDG~NDa~A--L~~AdVGI 811 (937)
+.=+..+++ +|.++++||||-|=+-. +..|-.|+
T Consensus 138 LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~ 178 (310)
T COG0078 138 LADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGM 178 (310)
T ss_pred HHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCC
Confidence 322222222 47899999999555443 34443443
No 212
>PLN02591 tryptophan synthase
Probab=58.08 E-value=91 Score=33.57 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=56.7
Q ss_pred CcCChhHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHcCCCCceeEe---------c-cChhhHHHHHHHHhcCCCE
Q 002310 723 DRIRDDAAHVVNSLSSQGIG-VYMLSGDK-KNSAEYVASLVGIPKDKVLS---------G-VKPNEKKRFINELQNDENV 790 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~-v~mlTGD~-~~tA~~iA~~~GI~~~~v~a---------r-~~Pe~K~~iV~~Lq~~G~~ 790 (937)
|-+=++..+..+.+++.|+. |.++|-.. ++..+.+++...= -+|+ + -.|++-.+.++.+|+....
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~g---FIY~Vs~~GvTG~~~~~~~~~~~~i~~vk~~~~~ 190 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEG---FVYLVSSTGVTGARASVSGRVESLLQELKEVTDK 190 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCC---cEEEeeCCCCcCCCcCCchhHHHHHHHHHhcCCC
Confidence 44448899999999999997 66666666 3567788877632 1221 1 2266667788889887677
Q ss_pred EEEEcCCcc---cHHHHHh
Q 002310 791 VAMVGDGIN---DAAALAS 806 (937)
Q Consensus 791 VamvGDG~N---Da~AL~~ 806 (937)
-.+||=|++ |+..+.+
T Consensus 191 Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 191 PVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred ceEEeCCCCCHHHHHHHHh
Confidence 788999999 5555444
No 213
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=57.66 E-value=77 Score=35.04 Aligned_cols=61 Identities=16% Similarity=0.249 Sum_probs=34.9
Q ss_pred eccChhhHHHHHHHHhc--CCCEEEEEcCC-cccHH---HHHhCCeeEEeC---C-ChHHHHhhcCEEEeC
Q 002310 770 SGVKPNEKKRFINELQN--DENVVAMVGDG-INDAA---ALASSHIGVAMG---G-GVGAASEVASVVLMG 830 (937)
Q Consensus 770 ar~~Pe~K~~iV~~Lq~--~G~~VamvGDG-~NDa~---AL~~AdVGIamg---~-gt~~a~~aADivL~~ 830 (937)
.-+||.-=.++++.+.- .|+.|+++|-| +==.| .|.+++.-+.+- + ....+...||||+.-
T Consensus 139 ~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 139 TPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 34556555555554432 48999999997 43333 455566555553 1 123334568888763
No 214
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=57.48 E-value=30 Score=36.70 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=28.7
Q ss_pred EEECCEEEEEEEecC--cCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcC
Q 002310 709 VGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVG 762 (937)
Q Consensus 709 v~~~~~~lG~i~l~D--~lr~~a~e~I~~L~~a-GI~v~mlTGD~~~tA~~iA~~~G 762 (937)
+.+||++..+..-.+ .+-+++.+++++|.+. +..|+++||-..........--+
T Consensus 2 lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~ 58 (235)
T PF02358_consen 2 LDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPN 58 (235)
T ss_dssp EE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS
T ss_pred cccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCC
Confidence 345666555544333 4567899999999776 45799999999998555544333
No 215
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=56.44 E-value=85 Score=33.90 Aligned_cols=79 Identities=14% Similarity=0.315 Sum_probs=49.8
Q ss_pred ecCcCChhHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHcC-CCCceeE-----ecc---ChhhHHHHHHHHhcCCC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG-VYMLSGDK-KNSAEYVASLVG-IPKDKVL-----SGV---KPNEKKRFINELQNDEN 789 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~-v~mlTGD~-~~tA~~iA~~~G-I~~~~v~-----ar~---~Pe~K~~iV~~Lq~~G~ 789 (937)
+-|.+-++..+.++.+++.|++ +.+++-.. .+....+++... .. -+. ... .+.+=.+.|+.+++.-.
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~gfi--y~vs~~G~TG~~~~~~~~~~~~i~~lr~~~~ 198 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQGFV--YLVSRAGVTGARNRAASALNELVKRLKAYSA 198 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCCCCE--EEEECCCCCCCcccCChhHHHHHHHHHhhcC
Confidence 4566668899999999999998 54777666 345667777764 21 111 111 22334566666666533
Q ss_pred EEEEEcCCcccH
Q 002310 790 VVAMVGDGINDA 801 (937)
Q Consensus 790 ~VamvGDG~NDa 801 (937)
.-.++|=|+|..
T Consensus 199 ~pi~vgfGI~~~ 210 (256)
T TIGR00262 199 KPVLVGFGISKP 210 (256)
T ss_pred CCEEEeCCCCCH
Confidence 346789999843
No 216
>PF01625 PMSR: Peptide methionine sulfoxide reductase; InterPro: IPR002569 Peptide methionine sulphoxide reductase (Msr) reverses the inactivation of many proteins due to the oxidation of critical methionine residues by reducing methionine sulphoxide, Met(O), to methionine []. It is present in most living organisms, and the cognate structural gene belongs to the so-called minimum gene set [, ]. The domains: MsrA and MsrB, reduce different epimeric forms of methionine sulphoxide. This group represent MsrA, the crystal structure of which has been determined in a number of organisms. In Mycobacterium tuberculosis, the MsrA structure has been determined to 1.5 Angstrom resolution []. In contrast to the three catalytic cysteine residues found in previously characterised MsrA structures, M. tuberculosis MsrA represents a class containing only two functional cysteine residues. The overall structure shows no resemblance to the structures of MsrB (IPR002579 from INTERPRO) from other organisms; though the active sites show approximate mirror symmetry. In each case, conserved amino acid motifs mediate the stereo-specific recognition and reduction of the substrate. In a number of pathogenic bacteria including Neisseria gonorrhoeae, the MsrA and MsrB domains are fused; the MsrA being N-terminal to MsrB. This arrangement is reversed in Treponema pallidum. In N. gonorrhoeae and Neisseria meningitidis a thioredoxin domain is fused to the N terminus. This may function to reduce the active sites of the downstream MsrA and MsrB domains. ; GO: 0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, 0019538 protein metabolic process, 0055114 oxidation-reduction process; PDB: 2GT3_A 1FF3_B 2IEM_A 3E0M_D 2J89_A 3PIN_B 3PIM_B 3PIL_B 2L90_A 3BQF_A ....
Probab=55.92 E-value=18 Score=35.86 Aligned_cols=40 Identities=23% Similarity=0.213 Sum_probs=34.0
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCC-------------------eeEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTE-------------------TAIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~-------------------~~~V~~d~~~~~~ 177 (937)
++|=|.+|..+.+++||.++.|-++.+ .+.|.|||..++.
T Consensus 7 ~GCFW~~e~~f~~~~GV~~t~vGYagG~~~~PtY~~v~~g~tgh~E~V~V~yD~~~is~ 65 (155)
T PF01625_consen 7 GGCFWGVEAAFRRLPGVISTRVGYAGGTTPNPTYRQVCSGRTGHAEAVRVTYDPSVISY 65 (155)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSSSS--HHHHHTTTTT-EEEEEEEEETTTS-H
T ss_pred cCCCeEhHHHHhhCCCEEEEEecccCCCCCCCcceeeecCCCCCeEEEEEEECCCcccH
Confidence 589999999999999999999987655 3678999999886
No 217
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=54.89 E-value=48 Score=37.39 Aligned_cols=37 Identities=11% Similarity=0.263 Sum_probs=34.5
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-C
Q 002310 726 RDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV-G 762 (937)
Q Consensus 726 r~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~-G 762 (937)
-|++.++++.|+++|+++.++|.=....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 568999999999999999999999999999999986 6
No 218
>KOG3973 consensus Uncharacterized conserved glycine-rich protein [Function unknown]
Probab=53.43 E-value=14 Score=40.49 Aligned_cols=8 Identities=13% Similarity=0.272 Sum_probs=3.8
Q ss_pred cccccCCc
Q 002310 69 ECMSSCAA 76 (937)
Q Consensus 69 ~~~~~~~~ 76 (937)
.|+|-|+-
T Consensus 411 q~~sgsg~ 418 (465)
T KOG3973|consen 411 QWISGSGV 418 (465)
T ss_pred ceeecccc
Confidence 35555543
No 219
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=52.73 E-value=25 Score=36.18 Aligned_cols=58 Identities=19% Similarity=0.373 Sum_probs=45.4
Q ss_pred EEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HcCCC--CceeEecc
Q 002310 715 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS---LVGIP--KDKVLSGV 772 (937)
Q Consensus 715 ~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~---~~GI~--~~~v~ar~ 772 (937)
+-|.+..+|..-|++.|++++|+.++.+|.-+|--..+.-+.+.+ +||++ .++||+-+
T Consensus 14 lSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl 76 (262)
T KOG3040|consen 14 LSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSL 76 (262)
T ss_pred ccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCcc
Confidence 568899999999999999999999999999999777776666655 45653 33555433
No 220
>COG4278 Uncharacterized conserved protein [Function unknown]
Probab=52.34 E-value=16 Score=37.92 Aligned_cols=10 Identities=40% Similarity=0.617 Sum_probs=5.2
Q ss_pred ccccCCcCCC
Q 002310 70 CMSSCAASFG 79 (937)
Q Consensus 70 ~~~~~~~~~~ 79 (937)
|||-.++.++
T Consensus 217 ~~sgcgS~gg 226 (269)
T COG4278 217 WMSGCGSYGG 226 (269)
T ss_pred cccccccccc
Confidence 5555555444
No 221
>COG0225 MsrA Peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover, chaperones]
Probab=52.15 E-value=20 Score=35.86 Aligned_cols=47 Identities=26% Similarity=0.240 Sum_probs=37.8
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCC-------------------eeEeeecCCCcccchhhhhhHHHHHHHH
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTE-------------------TAIVWPVSKAKVIPNWQRQLGEALAKHL 192 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~-------------------~~~V~~d~~~~~~~~~~~~~~~~i~~~i 192 (937)
++|=|-+|+...++|||.++.+-.+.+ .+.|.|||..++. ++|.+..
T Consensus 13 gGCFWg~E~~f~~i~GV~~t~~GYagG~~~nptY~~Vcsg~TgHaE~V~V~yDp~~isy--------~~LL~~f 78 (174)
T COG0225 13 GGCFWGVEAYFEQIPGVLSTVSGYAGGHTPNPTYEEVCSGTTGHAEAVEVTYDPKVISY--------EELLEVF 78 (174)
T ss_pred ccCccchHHHHhhCCCeEEEeeeEcCCCCCCCChhhccCCCCCceEEEEEEeCCccccH--------HHHHHHH
Confidence 588999999999999999998866544 3678899999886 5666554
No 222
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=51.16 E-value=45 Score=30.24 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEEe
Q 002310 331 MLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEVP 381 (937)
Q Consensus 331 ~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~ 381 (937)
++++++.+-.++-.|-.+|..+..+++.+.+..--.|+..+|-.|+...|.
T Consensus 14 ~~vl~~~ifyFli~RPQrKr~K~~~~ml~sL~kGD~VvT~gGi~G~V~~v~ 64 (97)
T COG1862 14 PLVLIFAIFYFLIIRPQRKRMKEHQELLNSLKKGDEVVTIGGIVGTVTKVG 64 (97)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHhccCCCEEEEcCCeEEEEEEEe
Confidence 333333333343444444444555555554444444555544333444443
No 223
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=50.01 E-value=49 Score=31.63 Aligned_cols=50 Identities=10% Similarity=0.028 Sum_probs=35.9
Q ss_pred EEEEEECCEEEEEE--E-ecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 002310 706 LVYVGVDNMLAGLI--Y-VEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE 755 (937)
Q Consensus 706 ~~~v~~~~~~lG~i--~-l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~ 755 (937)
.+.+..||+++--= . ..+++.+++.+++++|++.|++++++||-......
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 34556666663100 0 12568899999999999999999999999876543
No 224
>TIGR00401 msrA methionine-S-sulfoxide reductase. This model describes peptide methionine sulfoxide reductase (MsrA), a repair enzyme for proteins that have been inactivated by oxidation. The enzyme from E. coli is coextensive with this model and has enzymatic activity. However, in all completed genomes in which this module is present, a second protein module, described in TIGR00357, is also found, and in several cases as part of the same polypeptide chain: N-terminal to this module in Helicobacter pylori and Haemophilus influenzae (as in PilB of Neisseria gonorrhoeae) but C-terminal to it in Treponema pallidum. PilB, containing both domains, has been shown to be important for the expression of adhesins in certain pathogens.
Probab=49.72 E-value=24 Score=34.72 Aligned_cols=40 Identities=30% Similarity=0.276 Sum_probs=33.3
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCC-------------------CeeEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTT-------------------ETAIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~-------------------~~~~V~~d~~~~~~ 177 (937)
++|=|-+|....+++||.++++-++. +.+.|.|||..++.
T Consensus 7 gGCFWg~E~~f~~~~GV~~t~~GYagG~~~~PtY~~Vc~g~tgh~E~V~V~yDp~~is~ 65 (149)
T TIGR00401 7 GGCFWGVEKYFWLIPGVYSTAVGYTGGYTPNPTYEEVCSGDTGHAEAVQVTYDPKVISY 65 (149)
T ss_pred cCCchhhHHHHhcCCCEEEEEEeeCCCCCCCCChhhcccCCCCceEEEEEEECCCcCcH
Confidence 58999999999999999999876533 34678899999886
No 225
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=49.27 E-value=89 Score=33.49 Aligned_cols=123 Identities=14% Similarity=0.206 Sum_probs=76.3
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc----CCCCceeEe---ccChhhHHHHHHHHhcCCCEEEEEcCCcc---
Q 002310 730 AHVVNSLSSQGIGVYMLSGDKKNSAEYVASLV----GIPKDKVLS---GVKPNEKKRFINELQNDENVVAMVGDGIN--- 799 (937)
Q Consensus 730 ~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~----GI~~~~v~a---r~~Pe~K~~iV~~Lq~~G~~VamvGDG~N--- 799 (937)
.+.++.+.+.|.+|.++ |.++.++...++.+ |+. .+.+ =..|++-.++++.+.+.+..+.+||=|.=
T Consensus 95 ~~ll~~~~~~~~~v~ll-G~~~~v~~~a~~~l~~~y~l~--i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~PkQE 171 (243)
T PRK03692 95 EALMARAGKEGTPVFLV-GGKPEVLAQTEAKLRTQWNVN--IVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPKQE 171 (243)
T ss_pred HHHHHHHHhcCCeEEEE-CCCHHHHHHHHHHHHHHhCCE--EEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcHHH
Confidence 45666677788999999 77777666555544 542 1111 12477878899999999999999999942
Q ss_pred ----cHHHHHhCCeeEEeCCChHHH---HhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002310 800 ----DAAALASSHIGVAMGGGVGAA---SEVASVVLMGNRLSQLLVALELSRLTMKTVKQNLWW 856 (937)
Q Consensus 800 ----Da~AL~~AdVGIamg~gt~~a---~~aADivL~~~~l~~l~~~i~~~R~~~~~i~~nl~~ 856 (937)
+--..-...|.+++|+.-|.. ..-|.-.+..-+|..+..++.+=|+..+.+. |-.|
T Consensus 172 ~~~~~~~~~~~~~v~~gvGg~fD~~aG~~~RAP~w~~~~gLEWlyRl~~EP~R~~R~~~-~~~F 234 (243)
T PRK03692 172 IFMRDCRLVYPDALYMGVGGTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRIRRQLR-LLRY 234 (243)
T ss_pred HHHHHHHHhCCCCEEEEeCeEEEEecCCcCcCcHHHHHhChHHHHHhHhCcHHHHHHHH-HHHH
Confidence 222222345666666422211 1223334445578888888888777554433 4433
No 226
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=49.14 E-value=23 Score=33.17 Aligned_cols=40 Identities=20% Similarity=0.325 Sum_probs=31.0
Q ss_pred cCChhHHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHHHcCC
Q 002310 724 RIRDDAAHVVNSLSSQGIG-VYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~-v~mlTGD~~~tA~~iA~~~GI 763 (937)
-..+.+.+.+++|.+.|++ +|+.+|...+.+...|++.||
T Consensus 63 ~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 63 VPPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp S-HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 3566789999999999997 999999999999999999998
No 227
>PLN02423 phosphomannomutase
Probab=49.05 E-value=26 Score=37.51 Aligned_cols=41 Identities=27% Similarity=0.349 Sum_probs=35.1
Q ss_pred hhHHHHHHHHhcCCCEEEEEcC----CcccHHHHHh-CCeeEEeCCC
Q 002310 775 NEKKRFINELQNDENVVAMVGD----GINDAAALAS-SHIGVAMGGG 816 (937)
Q Consensus 775 e~K~~iV~~Lq~~G~~VamvGD----G~NDa~AL~~-AdVGIamg~g 816 (937)
-+|..-++.|+ ...-|++.|| |.||.+||+. -=.||.+.+=
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 48999999999 6778999999 8999999996 7778888543
No 228
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=48.91 E-value=33 Score=30.56 Aligned_cols=60 Identities=18% Similarity=0.079 Sum_probs=33.6
Q ss_pred CCCCChHHHHHHHHHhcCCcc--c-------cccCCceEEecCCeeEEEEcCe--E-EEeccHHHHHhcCCC
Q 002310 630 NTVHPIGKAIVEAAEFSNCQN--V-------KVADGTFIEEPGSGTVAIIEDR--K-VSVGTIDWLRSHGVD 689 (937)
Q Consensus 630 ~s~hP~~~Ai~~~a~~~~~~~--~-------~~~~~~~~~~~g~g~~~~i~~~--~-~~~G~~~~l~~~~~~ 689 (937)
...+|.+.||+.++...+... . ....-.|.....+.....-++. . +.||+++.+.++|..
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVRNDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEeCCCEEEEEcCCChHHHHHhcCC
Confidence 456799999999988875321 0 0101122222222222221332 2 789999999998853
No 229
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=48.68 E-value=65 Score=32.55 Aligned_cols=106 Identities=17% Similarity=0.160 Sum_probs=70.8
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCHHH-HHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHh
Q 002310 728 DAAHVVNSLSSQGIGVYMLSGDKKNS-AEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALAS 806 (937)
Q Consensus 728 ~a~e~I~~L~~aGI~v~mlTGD~~~t-A~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~ 806 (937)
|..+++..+++.+-++.+++=.+... ...+.+.+|++- ..+.=-+|++=...|+.+++.| .-+.||++.-
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i-~~~~~~~~~e~~~~i~~~~~~G-~~viVGg~~~------- 135 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI-KIYPYDSEEEIEAAIKQAKAEG-VDVIVGGGVV------- 135 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE-EEEEESSHHHHHHHHHHHHHTT---EEEESHHH-------
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce-EEEEECCHHHHHHHHHHHHHcC-CcEEECCHHH-------
Confidence 55566666666666777777555553 778888888842 3444467888889999999998 4566776531
Q ss_pred CCeeEEeCCChHHHH-hhcCEEEeCCChhHHHHHHHHHHHHHHHHHH
Q 002310 807 SHIGVAMGGGVGAAS-EVASVVLMGNRLSQLLVALELSRLTMKTVKQ 852 (937)
Q Consensus 807 AdVGIamg~gt~~a~-~aADivL~~~~l~~l~~~i~~~R~~~~~i~~ 852 (937)
.+.|+ ..-..++...+-.++..++..++++.+..++
T Consensus 136 ----------~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 136 ----------CRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp ----------HHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 12222 2345677888899999999999999988765
No 230
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=48.65 E-value=90 Score=33.38 Aligned_cols=79 Identities=16% Similarity=0.299 Sum_probs=48.5
Q ss_pred CcCChhHHHHHHHHHhCCCeEEE-EcCCC-HHHHHHHHH-HcCCC----CceeEeccC--hhhHHHHHHHHhcCCCEEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYM-LSGDK-KNSAEYVAS-LVGIP----KDKVLSGVK--PNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~m-lTGD~-~~tA~~iA~-~~GI~----~~~v~ar~~--Pe~K~~iV~~Lq~~G~~Vam 793 (937)
|-+=++..+.++.+++.|++..+ ++-.. .+..+.+++ ..|.. ..-++...+ +.+-.+.|+.+++....-.+
T Consensus 112 Dl~~ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~vy~~s~~g~tG~~~~~~~~~~~~i~~lr~~~~~pI~ 191 (242)
T cd04724 112 DLPPEEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGFIYYVSRTGVTGARTELPDDLKELIKRIRKYTDLPIA 191 (242)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCCEEEEeCCCCCCCccCCChhHHHHHHHHHhcCCCcEE
Confidence 43446888999999999998555 55443 455566776 55541 001122212 34445667777766556677
Q ss_pred EcCCcccH
Q 002310 794 VGDGINDA 801 (937)
Q Consensus 794 vGDG~NDa 801 (937)
+|-|+|+.
T Consensus 192 vggGI~~~ 199 (242)
T cd04724 192 VGFGISTP 199 (242)
T ss_pred EEccCCCH
Confidence 89999944
No 231
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=48.37 E-value=1.9e+02 Score=34.87 Aligned_cols=70 Identities=16% Similarity=0.144 Sum_probs=56.1
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcc
Q 002310 728 DAAHVVNSLSSQGIGVYMLSGDK-KNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIN 799 (937)
Q Consensus 728 ~a~e~I~~L~~aGI~v~mlTGD~-~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~N 799 (937)
|+..++..+++.+-++.+++=.+ ...+..++..++++- ..+.-.+++|=...|+.++++|.. ++|||++-
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~e~~~~v~~lk~~G~~-~vvG~~~~ 165 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI-EQRSYVTEEDARGQINELKANGIE-AVVGAGLI 165 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-EEEEecCHHHHHHHHHHHHHCCCC-EEEcCchH
Confidence 67788888888888899888666 456778999999863 567778999999999999999964 56788754
No 232
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=47.71 E-value=68 Score=34.31 Aligned_cols=115 Identities=20% Similarity=0.282 Sum_probs=67.0
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc--eeEecc-----------------ChhhHHH-HH--
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD--KVLSGV-----------------KPNEKKR-FI-- 781 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~--~v~ar~-----------------~Pe~K~~-iV-- 781 (937)
.+|+++.+.++.|++.+|.+.+.|+-=-.....+-++.|...+ .|.++. -+--|-. .+
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~ 169 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALED 169 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTT
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccC
Confidence 6899999999999999999999997777777777777776322 122211 1112222 11
Q ss_pred ----HHHhcCCCEEEEEcCCcccHHHHHhC---CeeEEeC---CChH----HHHhhcCEEEeCCChhHHHHH
Q 002310 782 ----NELQNDENVVAMVGDGINDAAALASS---HIGVAMG---GGVG----AASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 782 ----~~Lq~~G~~VamvGDG~NDa~AL~~A---dVGIamg---~gt~----~a~~aADivL~~~~l~~l~~~ 839 (937)
+.++. ...|...||..-|+.|-.-. +.-+.+| ...+ .-+++-||||.+|.=-.++..
T Consensus 170 ~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v~~~ 240 (246)
T PF05822_consen 170 SPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDVPNA 240 (246)
T ss_dssp HHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HHHHH
T ss_pred chHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchHHHH
Confidence 22222 34699999999999987555 4445555 2223 344678999999864444443
No 233
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=46.86 E-value=37 Score=33.71 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=37.7
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
=.+||++.+.++.|++. +++.+.|.=.+..|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 36899999999999965 999999999999999999999876
No 234
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=46.77 E-value=38 Score=31.85 Aligned_cols=68 Identities=24% Similarity=0.394 Sum_probs=44.5
Q ss_pred ecCcCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCCcee--EeccChhhHHHHHHHHhcCC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSAE------YVASLVGIPKDKV--LSGVKPNEKKRFINELQNDE 788 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v--~ar~~Pe~K~~iV~~Lq~~G 788 (937)
+...++++.++-++.|++.|++ ++++-||++.+.. ..|+++||.-..+ -...+.++=.+.|+.|.+..
T Consensus 8 va~~i~~~l~~~i~~l~~~~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~D~ 86 (117)
T PF00763_consen 8 VAKEIKEELKEEIEKLKEKGITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELIEKLNEDP 86 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHCT---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHHHHHhCCC
Confidence 3456788999999999999987 4567799988665 4688999963222 23457777778888887654
No 235
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=45.88 E-value=1.3e+02 Score=29.02 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=45.2
Q ss_pred EEEEEEEecCcCChhHHHHHHHHHhCCCe--EEEEcCCC------HHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHh
Q 002310 714 MLAGLIYVEDRIRDDAAHVVNSLSSQGIG--VYMLSGDK------KNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQ 785 (937)
Q Consensus 714 ~~lG~i~l~D~lr~~a~e~I~~L~~aGI~--v~mlTGD~------~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq 785 (937)
.++|+-++.=.--+..+++++.|+++|++ ++|+-|-- ...-+.-++++|++ .+|..-+|- .+++..++
T Consensus 54 diVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~--~vF~pgt~~--~~iv~~l~ 129 (134)
T TIGR01501 54 DAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFD--RVFAPGTPP--EVVIADLK 129 (134)
T ss_pred CEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHHHHHHcCCC--EEECcCCCH--HHHHHHHH
Confidence 46666666667777899999999999973 56666631 11124457899986 788765544 23455444
Q ss_pred c
Q 002310 786 N 786 (937)
Q Consensus 786 ~ 786 (937)
+
T Consensus 130 ~ 130 (134)
T TIGR01501 130 K 130 (134)
T ss_pred H
Confidence 3
No 236
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=45.63 E-value=4.3e+02 Score=28.68 Aligned_cols=80 Identities=13% Similarity=0.179 Sum_probs=56.2
Q ss_pred EecCcCChhHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHcCCCCceeEe--c--------cChhhHHHHHHHHhcC
Q 002310 720 YVEDRIRDDAAHVVNSLSSQGIG-VYMLSGDK-KNSAEYVASLVGIPKDKVLS--G--------VKPNEKKRFINELQND 787 (937)
Q Consensus 720 ~l~D~lr~~a~e~I~~L~~aGI~-v~mlTGD~-~~tA~~iA~~~GI~~~~v~a--r--------~~Pe~K~~iV~~Lq~~ 787 (937)
.+-|-+=++..+.++.+++.|+. +.+++-.. .+.-+.+++...= -+|+ + ..|++-.++++.+|+.
T Consensus 124 iipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~g---FIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~ 200 (263)
T CHL00200 124 IIPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPG---CIYLVSTTGVTGLKTELDKKLKKLIETIKKM 200 (263)
T ss_pred EecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCC---cEEEEcCCCCCCCCccccHHHHHHHHHHHHh
Confidence 35676678999999999999997 77787776 4566778887762 1221 1 2245556778888876
Q ss_pred CCEEEEEcCCcccHH
Q 002310 788 ENVVAMVGDGINDAA 802 (937)
Q Consensus 788 G~~VamvGDG~NDa~ 802 (937)
-..-.+||=|+|+..
T Consensus 201 t~~Pi~vGFGI~~~e 215 (263)
T CHL00200 201 TNKPIILGFGISTSE 215 (263)
T ss_pred cCCCEEEECCcCCHH
Confidence 555667899999553
No 237
>PF11491 DUF3213: Protein of unknown function (DUF3213) ; InterPro: IPR021583 The backbone structure of this family of proteins has been determined however the function remains unknown. The protein has an alpha and beta structure with a ferredoxin-like fold []. ; PDB: 2F40_A.
Probab=45.35 E-value=26 Score=30.38 Aligned_cols=54 Identities=15% Similarity=-0.050 Sum_probs=31.8
Q ss_pred hHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccc
Q 002310 139 GCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (937)
Q Consensus 139 ~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (937)
.-|..++--|++.++|-.+-+|.-.+.+.|.||+...+. +++.+.+++..+++.
T Consensus 11 eeA~~~QYeLsk~~~vyRvFiNgYar~g~VifDe~kl~~--------e~lL~~le~~kpEVi 64 (88)
T PF11491_consen 11 EEAMVKQYELSKNEAVYRVFINGYARNGFVIFDESKLSK--------EELLEMLEEFKPEVI 64 (88)
T ss_dssp TTTHHHHHTTTTTTTB------TTSS--EEE--B-S-SH--------HHH---HHHTTT-SS
T ss_pred HHHHHHHHHhhcccceeeeeecccccceEEEECcccCCH--------HHHHHHHHhcChhhe
Confidence 445677888999999999999999999999999998775 889999998777654
No 238
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=44.28 E-value=96 Score=29.21 Aligned_cols=66 Identities=14% Similarity=0.055 Sum_probs=44.8
Q ss_pred EEEEEEEecCcCChhHHHHHHHHHhCCC-eE-EEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHH
Q 002310 714 MLAGLIYVEDRIRDDAAHVVNSLSSQGI-GV-YMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRF 780 (937)
Q Consensus 714 ~~lG~i~l~D~lr~~a~e~I~~L~~aGI-~v-~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~i 780 (937)
.++++-.......+.+++.++.|++.|. ++ +++-|-.+..-.+-.++.|++ ..++.+.++++=...
T Consensus 52 d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d-~~~~~~~~~~~~~~~ 119 (122)
T cd02071 52 DVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVA-EIFGPGTSIEEIIDK 119 (122)
T ss_pred CEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCC-EEECCCCCHHHHHHH
Confidence 4556666677888899999999999987 43 455565554445667799987 244456666654443
No 239
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=43.65 E-value=1.3e+02 Score=27.78 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=16.7
Q ss_pred HHHHHhhHHHHHhhcCCCceEEEEecCCCCCeEEEE
Q 002310 345 RAKIKATSDMTGLLGILPSKARLLVDNDAKDSIIEV 380 (937)
Q Consensus 345 ~~~~k~~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v 380 (937)
|..+|.++..+++.+.+..--+|+..+|-.|+..++
T Consensus 37 RpqkK~~k~~~~~~~~Lk~Gd~VvT~gGi~G~Vv~i 72 (106)
T PRK05585 37 RPQQKRQKEHKKMLSSLAKGDEVVTNGGIIGKVTKV 72 (106)
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEECCCeEEEEEEE
Confidence 333333444455544444444555555433444444
No 240
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.20 E-value=1.8e+02 Score=31.89 Aligned_cols=62 Identities=11% Similarity=0.202 Sum_probs=36.2
Q ss_pred EeccChhhHHHHHHHHhc--CCCEEEEEcC-CcccHH---HHHhCCeeEEeC--CCh--HHHHhhcCEEEeC
Q 002310 769 LSGVKPNEKKRFINELQN--DENVVAMVGD-GINDAA---ALASSHIGVAMG--GGV--GAASEVASVVLMG 830 (937)
Q Consensus 769 ~ar~~Pe~K~~iV~~Lq~--~G~~VamvGD-G~NDa~---AL~~AdVGIamg--~gt--~~a~~aADivL~~ 830 (937)
|.=+||.-=.++++.+.- .|+.|+++|- |+==.| .|.+++.-+.+- ... ......||||+.-
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 344566655555554432 4899999999 555444 455555555552 222 2234679998863
No 241
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=42.91 E-value=3e+02 Score=26.04 Aligned_cols=86 Identities=14% Similarity=0.202 Sum_probs=52.9
Q ss_pred EecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcc
Q 002310 720 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGIN 799 (937)
Q Consensus 720 ~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~N 799 (937)
.+-+++.++..+.+++ |+.+.....-..+......+. .+ .++++..+.--.++++.+.+ =+.|...|-|.|
T Consensus 2 li~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~--~d--~ii~~~~~~~~~~~l~~~~~-Lk~I~~~~~G~d 72 (133)
T PF00389_consen 2 LITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKD--AD--AIIVGSGTPLTAEVLEAAPN-LKLISTAGAGVD 72 (133)
T ss_dssp EESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTT--ES--EEEESTTSTBSHHHHHHHTT--SEEEESSSSCT
T ss_pred EEeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCC--Ce--EEEEcCCCCcCHHHHhccce-eEEEEEcccccC
Confidence 4566777766666655 888888874444433333332 22 45666555333566677743 357899999988
Q ss_pred --cHHHHHhCCeeEEeC
Q 002310 800 --DAAALASSHIGVAMG 814 (937)
Q Consensus 800 --Da~AL~~AdVGIamg 814 (937)
|..++++-+|-++=.
T Consensus 73 ~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 73 NIDLEAAKERGIPVTNV 89 (133)
T ss_dssp TB-HHHHHHTTSEEEE-
T ss_pred cccHHHHhhCeEEEEEe
Confidence 788999988888774
No 242
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=42.88 E-value=1e+02 Score=30.99 Aligned_cols=118 Identities=14% Similarity=0.184 Sum_probs=68.8
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CceeEec----cChhhHHHHHHHHhcCCCEEEEEcCCcccHH
Q 002310 729 AAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP--KDKVLSG----VKPNEKKRFINELQNDENVVAMVGDGINDAA 802 (937)
Q Consensus 729 a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~--~~~v~ar----~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~ 802 (937)
..+.++.+.+.|.++.++ |.+++.+...++.+.=. .-.+... .++++-.++++.+++.+..+.++|-|.---.
T Consensus 37 ~~~l~~~~~~~~~~ifll-G~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vglG~PkQE 115 (172)
T PF03808_consen 37 FPDLLRRAEQRGKRIFLL-GGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGLGAPKQE 115 (172)
T ss_pred HHHHHHHHHHcCCeEEEE-eCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHH
Confidence 356677777888898888 55566655444443210 0022222 2567888999999999999999999965332
Q ss_pred -------HHHhCCeeEEeCCChHHHHh---hcCEEEeCCChhHHHHHHHHHHHHH
Q 002310 803 -------ALASSHIGVAMGGGVGAASE---VASVVLMGNRLSQLLVALELSRLTM 847 (937)
Q Consensus 803 -------AL~~AdVGIamg~gt~~a~~---aADivL~~~~l~~l~~~i~~~R~~~ 847 (937)
..-.+.|.|++|..-|.... -|.-.+.+-++..+..++.+=|+.+
T Consensus 116 ~~~~~~~~~l~~~v~i~vG~~~d~~aG~~~raP~w~~~~glEWlyRl~~eP~Rl~ 170 (172)
T PF03808_consen 116 RWIARHRQRLPAGVIIGVGGAFDFLAGKVKRAPKWMRRLGLEWLYRLLQEPKRLW 170 (172)
T ss_pred HHHHHHHHHCCCCEEEEECchhhhhccCcCccCHHHHHcCcHHHHHHHhChHhhh
Confidence 22233477777754443322 1222223334566666665555443
No 243
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=42.19 E-value=29 Score=36.99 Aligned_cols=83 Identities=16% Similarity=0.113 Sum_probs=48.9
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------------cCCCCceeEeccChhhHHHHHHHHhcC-CCEEE
Q 002310 726 RDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL------------VGIPKDKVLSGVKPNEKKRFINELQND-ENVVA 792 (937)
Q Consensus 726 r~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~------------~GI~~~~v~ar~~Pe~K~~iV~~Lq~~-G~~Va 792 (937)
-++..++++.|++.|++. ++|......+...... +|-.. .....-.|+-=..+.+.+... ...+.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~-~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKV-IYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcE-ecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 478999999999999997 6676544333222222 22211 112222222223344444322 34799
Q ss_pred EEcCC-cccHHHHHhCCee
Q 002310 793 MVGDG-INDAAALASSHIG 810 (937)
Q Consensus 793 mvGDG-~NDa~AL~~AdVG 810 (937)
||||. .+|..+-++|.+-
T Consensus 218 ~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGID 236 (242)
T ss_pred EECCCcHHHHHHHHHCCCe
Confidence 99999 5999988888764
No 244
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=41.87 E-value=25 Score=38.21 Aligned_cols=14 Identities=0% Similarity=-0.202 Sum_probs=5.4
Q ss_pred CCcchhHHHHHHHh
Q 002310 10 TTTTLTLFTISKAR 23 (937)
Q Consensus 10 ~~~~~~~~~~~~~~ 23 (937)
+.|.+-.=.++.++
T Consensus 137 i~P~fr~gny~~gi 150 (271)
T COG1512 137 IAPAFRDGNYAGGL 150 (271)
T ss_pred hCcccccCcHHHHH
Confidence 33433333334444
No 245
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=39.76 E-value=83 Score=35.76 Aligned_cols=91 Identities=26% Similarity=0.343 Sum_probs=64.3
Q ss_pred EEEEE-CCEEEEEEEecCcCChhHHHHHHHHHhCCCe--EEEEcCCC-HHHHHHHHHHcCCCCceeEeccChhhHHHHHH
Q 002310 707 VYVGV-DNMLAGLIYVEDRIRDDAAHVVNSLSSQGIG--VYMLSGDK-KNSAEYVASLVGIPKDKVLSGVKPNEKKRFIN 782 (937)
Q Consensus 707 ~~v~~-~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~--v~mlTGD~-~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~ 782 (937)
+|+-+ +.+..|-+=++ ++...+.+|-+.+-+ |+-.|+-| -..+..-|+++||+-..|.-..+|..|.+
T Consensus 83 vyLK~E~lQpsgSFK~R-----Ga~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq--- 154 (457)
T KOG1250|consen 83 VYLKREDLQPSGSFKIR-----GAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQ--- 154 (457)
T ss_pred eEEEehhcccccceehh-----hHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHH---
Confidence 44433 34555544332 788888888777744 55566555 55556788999999888888999999865
Q ss_pred HHhcCCCEEEEEcCCcccHHHHH
Q 002310 783 ELQNDENVVAMVGDGINDAAALA 805 (937)
Q Consensus 783 ~Lq~~G~~VamvGDG~NDa~AL~ 805 (937)
.+|..|..|...|+-.--+-+++
T Consensus 155 ~~~nlGA~Vil~G~~~deAk~~a 177 (457)
T KOG1250|consen 155 RCRNLGATVILSGEDWDEAKAFA 177 (457)
T ss_pred HHhccCCEEEEecccHHHHHHHH
Confidence 55667999999999876665554
No 246
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.44 E-value=61 Score=38.94 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=31.3
Q ss_pred CCeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeec
Q 002310 374 KDSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAG 408 (937)
Q Consensus 374 ~g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G 408 (937)
+|...++|..-|+.||||-++||+.-||.+.=+++
T Consensus 163 DGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~d 197 (1354)
T KOG4383|consen 163 DGHLMELPRILLVEGDIIAFRPGQEAFANCEGFDD 197 (1354)
T ss_pred cCeeeecceeEEEeccEEEecCCccccccccccCC
Confidence 37999999999999999999999999998766655
No 247
>TIGR01659 sex-lethal sex-lethal family splicing factor. This model describes the sex-lethal family of splicing factors found in Dipteran insects. The sex-lethal phenotype, however, may be limited to the Melanogasters and closely related species. In Drosophila the protein acts as an inhibitor of splicing. This subfamily is most closely related to the ELAV/HUD subfamily of splicing factors (TIGR01661).
Probab=38.01 E-value=2.8e+02 Score=31.42 Aligned_cols=47 Identities=11% Similarity=-0.079 Sum_probs=37.4
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCC------CeeEeeecC
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTT------ETAIVWPVS 172 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~------~~~~V~~d~ 172 (937)
...++.|.++.-..-...|++.++....|.++++-... +-+.|+|..
T Consensus 106 ~~~~LfVgnLp~~~te~~L~~lF~~~G~V~~v~i~~d~~tg~srGyaFVeF~~ 158 (346)
T TIGR01659 106 SGTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFGS 158 (346)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCEEEEEEEecCCCCccCcEEEEEEcc
Confidence 45679999999888888999999999999988885432 348898853
No 248
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=37.71 E-value=1e+02 Score=30.58 Aligned_cols=73 Identities=22% Similarity=0.261 Sum_probs=46.9
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEec--cChhhHH---HHHHHHhcCCCEEE-EEcCCcccHH
Q 002310 729 AAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSG--VKPNEKK---RFINELQNDENVVA-MVGDGINDAA 802 (937)
Q Consensus 729 a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar--~~Pe~K~---~iV~~Lq~~G~~Va-mvGDG~NDa~ 802 (937)
..+.=+.|++.|+..+++.||....-..+++++++. .|++. ..|+++. ++.+.|++.|-.+- +-++..-+..
T Consensus 55 L~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~--~V~~~~~~~~~~~~rd~~v~~~l~~~~i~~~~~~~~~L~~~~ 132 (165)
T PF00875_consen 55 LADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGAT--AVYFNEEYTPYERRRDERVRKALKKHGIKVHTFDDHTLVPPD 132 (165)
T ss_dssp HHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTES--EEEEE---SHHHHHHHHHHHHHHHHTTSEEEEE--SSSS-HH
T ss_pred HHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcC--eeEeccccCHHHHHHHHHHHHHHHhcceEEEEECCcEEEecc
Confidence 344556677789999999999999999999999997 66664 4555553 34556666665443 3444444443
Q ss_pred H
Q 002310 803 A 803 (937)
Q Consensus 803 A 803 (937)
.
T Consensus 133 ~ 133 (165)
T PF00875_consen 133 D 133 (165)
T ss_dssp H
T ss_pred c
Confidence 3
No 249
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=37.58 E-value=1.5e+02 Score=31.70 Aligned_cols=98 Identities=20% Similarity=0.238 Sum_probs=0.0
Q ss_pred EEecCcC---ChhHHHHHHHHHhCCCeEEEEcCC--CHHHHHHHHHHcC----CCCceeEeccChhhHHHHHHHHhcCC-
Q 002310 719 IYVEDRI---RDDAAHVVNSLSSQGIGVYMLSGD--KKNSAEYVASLVG----IPKDKVLSGVKPNEKKRFINELQNDE- 788 (937)
Q Consensus 719 i~l~D~l---r~~a~e~I~~L~~aGI~v~mlTGD--~~~tA~~iA~~~G----I~~~~v~ar~~Pe~K~~iV~~Lq~~G- 788 (937)
+.+.|-+ -++..+.++.+++.|+++.++-.. ..+..+.+++... +..+-.+...-+.+-.+.++.+++.-
T Consensus 105 vii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~~~~l~msv~~~~g~~~~~~~~~~i~~lr~~~~ 184 (244)
T PRK13125 105 VLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLSPLFIYYGLRPATGVPLPVSVERNIKRVRNLVG 184 (244)
T ss_pred EEECCCCCCcHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCEEEEEeCCCCCCCchHHHHHHHHHHHHhcC
Q ss_pred CEEEEEcCCc---ccHHHHHhCCe-eEEeCCC
Q 002310 789 NVVAMVGDGI---NDAAALASSHI-GVAMGGG 816 (937)
Q Consensus 789 ~~VamvGDG~---NDa~AL~~AdV-GIamg~g 816 (937)
.....+|-|+ +|+..+..+.+ |+-+|++
T Consensus 185 ~~~i~v~gGI~~~e~i~~~~~~gaD~vvvGSa 216 (244)
T PRK13125 185 NKYLVVGFGLDSPEDARDALSAGADGVVVGTA 216 (244)
T ss_pred CCCEEEeCCcCCHHHHHHHHHcCCCEEEECHH
No 250
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.37 E-value=73 Score=34.98 Aligned_cols=67 Identities=25% Similarity=0.342 Sum_probs=48.4
Q ss_pred ecCcCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHHHH------HHHHcCCCCceeEe--ccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQ-GIG---VYMLSGDKKNSAEY------VASLVGIPKDKVLS--GVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~a-GI~---v~mlTGD~~~tA~~------iA~~~GI~~~~v~a--r~~Pe~K~~iV~~Lq~~ 787 (937)
+.++++++.++-|+.|++. |++ .+++-||++....+ .++++||+-..+.- .+++++=.+.++.|.+.
T Consensus 11 ~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d 89 (283)
T PRK14192 11 LAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNAN 89 (283)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567899999999999876 775 45677999887644 67899997322222 35666667788888776
No 251
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=36.69 E-value=1.5e+02 Score=30.46 Aligned_cols=37 Identities=27% Similarity=0.327 Sum_probs=24.7
Q ss_pred hHHHHHHHHHhCCCeEEEEc------C-------CCHHHHHHHHHHcCCC
Q 002310 728 DAAHVVNSLSSQGIGVYMLS------G-------DKKNSAEYVASLVGIP 764 (937)
Q Consensus 728 ~a~e~I~~L~~aGI~v~mlT------G-------D~~~tA~~iA~~~GI~ 764 (937)
|+--++..+++.|.+|.-++ + .+.+.++.+|+.+||+
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgip 60 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIP 60 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCc
Confidence 34445566666777655443 1 2567889999999997
No 252
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=36.63 E-value=2.9e+02 Score=26.83 Aligned_cols=77 Identities=16% Similarity=0.164 Sum_probs=57.1
Q ss_pred EEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEc--CCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHH
Q 002310 706 LVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLS--GDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINE 783 (937)
Q Consensus 706 ~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlT--GD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~ 783 (937)
+..+..+|+++-+...++-=|. +.|+.+.+.|..|++.| ...+++++.+|+.++-.--.---.++-++|.++++.
T Consensus 45 iAildL~G~~l~l~S~R~~~~~---evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~A~ly~P~~dlsveeK~~l~~~ 121 (138)
T PF04312_consen 45 IAILDLDGELLDLKSSRNMSRS---EVIEWISEYGKPVIVATDVSPPPETVKKIARSFNAVLYTPERDLSVEEKQELARE 121 (138)
T ss_pred EEEEecCCcEEEEEeecCCCHH---HHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhCCcccCCCCcCCHHHHHHHHHh
Confidence 3445567888887777766555 57778888999998888 567899999999999631111235788999999988
Q ss_pred Hh
Q 002310 784 LQ 785 (937)
Q Consensus 784 Lq 785 (937)
+.
T Consensus 122 ~~ 123 (138)
T PF04312_consen 122 YS 123 (138)
T ss_pred hC
Confidence 75
No 253
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=36.56 E-value=2.1e+02 Score=26.67 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=21.8
Q ss_pred hHHHHHhhcCCCceEEEEecCCCCCeEEEEeCCCccCCcEEEEc--CCCEEeee
Q 002310 351 TSDMTGLLGILPSKARLLVDNDAKDSIIEVPCNSLHVGDHIVVL--PGDRIPAD 402 (937)
Q Consensus 351 ~~~l~~l~~~~p~~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~--~Ge~IPaD 402 (937)
.+..+++.+.+..--+|+..+|-.|+...|. .|.|.|+ +|-++..+
T Consensus 29 ~K~~~~m~~~Lk~GD~VvT~gGi~G~V~~I~------d~~v~leia~gv~i~~~ 76 (109)
T PRK05886 29 MQATIDLHESLQPGDRVHTTSGLQATIVGIT------DDTVDLEIAPGVVTTWM 76 (109)
T ss_pred HHHHHHHHHhcCCCCEEEECCCeEEEEEEEe------CCEEEEEECCCeEEEEE
Confidence 3344444444444445555554445555543 2555554 44444443
No 254
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=35.71 E-value=4.1e+02 Score=25.53 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=64.3
Q ss_pred EEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCceeEeccC---hhhHHHHHHHHhcCCC-
Q 002310 715 LAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDK-KNSAEYVASLVGIPKDKVLSGVK---PNEKKRFINELQNDEN- 789 (937)
Q Consensus 715 ~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~-~~tA~~iA~~~GI~~~~v~ar~~---Pe~K~~iV~~Lq~~G~- 789 (937)
++|.+.. |--..+..=+-..|+.+|++|+-+-+|. ++...+.|++-+-+- .+.|.+. .+.=.++++.|+++|.
T Consensus 6 ~~a~~g~-D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adi-i~iSsl~~~~~~~~~~~~~~L~~~g~~ 83 (132)
T TIGR00640 6 LVAKMGQ-DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHV-VGVSSLAGGHLTLVPALRKELDKLGRP 83 (132)
T ss_pred EEEeeCC-CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCE-EEEcCchhhhHHHHHHHHHHHHhcCCC
Confidence 3444444 5555566666678899999999998885 445556666666531 2233333 3444677888888764
Q ss_pred -EEEEEcC--CcccHHHHHhCCeeEEeCCChH
Q 002310 790 -VVAMVGD--GINDAAALASSHIGVAMGGGVG 818 (937)
Q Consensus 790 -~VamvGD--G~NDa~AL~~AdVGIamg~gt~ 818 (937)
...++|- ...|...++++.|-=.++.|++
T Consensus 84 ~i~vivGG~~~~~~~~~l~~~Gvd~~~~~gt~ 115 (132)
T TIGR00640 84 DILVVVGGVIPPQDFDELKEMGVAEIFGPGTP 115 (132)
T ss_pred CCEEEEeCCCChHhHHHHHHCCCCEEECCCCC
Confidence 5677773 3446788888887555555543
No 255
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=35.47 E-value=2.9e+02 Score=26.72 Aligned_cols=61 Identities=11% Similarity=0.047 Sum_probs=43.6
Q ss_pred EEEEEEEecCcCChhHHHHHHHHHhCCC-e-EEEEcCCC------HHHHHHHHHHcCCCCceeEeccChhh
Q 002310 714 MLAGLIYVEDRIRDDAAHVVNSLSSQGI-G-VYMLSGDK------KNSAEYVASLVGIPKDKVLSGVKPNE 776 (937)
Q Consensus 714 ~~lG~i~l~D~lr~~a~e~I~~L~~aGI-~-v~mlTGD~------~~tA~~iA~~~GI~~~~v~ar~~Pe~ 776 (937)
.++|+-.+.-...+.+++.++.|++.|. + .+++-|-- .......++++|.+ .+|..-+|-+
T Consensus 56 d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~~--~vf~~~~~~~ 124 (137)
T PRK02261 56 DAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGFD--RVFPPGTDPE 124 (137)
T ss_pred CEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHHHHHHHcCCC--EEECcCCCHH
Confidence 5777777888899999999999999966 3 34554532 34445678899986 7887544433
No 256
>PTZ00445 p36-lilke protein; Provisional
Probab=35.42 E-value=48 Score=34.56 Aligned_cols=52 Identities=10% Similarity=0.041 Sum_probs=37.9
Q ss_pred HHhCCCeEEEEEECCEEEE-----EEEe-------cCcCChhHHHHHHHHHhCCCeEEEEcCCC
Q 002310 699 EDLMNQSLVYVGVDNMLAG-----LIYV-------EDRIRDDAAHVVNSLSSQGIGVYMLSGDK 750 (937)
Q Consensus 699 ~~~~~~~~~~v~~~~~~lG-----~i~l-------~D~lr~~a~e~I~~L~~aGI~v~mlTGD~ 750 (937)
....|-..+....|+++++ ..-- --.++|+.++-+++|+++||+|.++|=-.
T Consensus 38 L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd 101 (219)
T PTZ00445 38 LNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSD 101 (219)
T ss_pred HHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 4455677777777777765 2211 11279999999999999999999999433
No 257
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=35.17 E-value=2.6e+02 Score=28.53 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHhCCCeEEE--EcCCCHHHHHHHHHHcCCC
Q 002310 727 DDAAHVVNSLSSQGIGVYM--LSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 727 ~~a~e~I~~L~~aGI~v~m--lTGD~~~tA~~iA~~~GI~ 764 (937)
....+.++.+++.|+++.+ ++=+++..+.. +.+.|.+
T Consensus 90 ~~~~~~i~~~~~~g~~~~v~~~~~~t~~e~~~-~~~~~~d 128 (202)
T cd04726 90 STIKKAVKAAKKYGKEVQVDLIGVEDPEKRAK-LLKLGVD 128 (202)
T ss_pred HHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHH-HHHCCCC
Confidence 3567899999999999875 78888888777 7777775
No 258
>KOG3915 consensus Transcription regulator dachshund, contains SKI/SNO domain [Transcription]
Probab=35.11 E-value=36 Score=38.74 Aligned_cols=6 Identities=33% Similarity=-0.097 Sum_probs=2.4
Q ss_pred cccchh
Q 002310 48 FASLSR 53 (937)
Q Consensus 48 ~~~~~~ 53 (937)
+++++-
T Consensus 37 ~a~~~~ 42 (641)
T KOG3915|consen 37 PASSGP 42 (641)
T ss_pred ccccCc
Confidence 444433
No 259
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=34.87 E-value=1.5e+02 Score=31.58 Aligned_cols=79 Identities=19% Similarity=0.283 Sum_probs=43.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHHHcCCCCc----eeEeccChhhHHHHHHHHhcCCCEEEEEcC
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKKNS----AEYVASLVGIPKD----KVLSGVKPNEKKRFINELQNDENVVAMVGD 796 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~~t----A~~iA~~~GI~~~----~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGD 796 (937)
+=||+.|-++...+.|.+|.-+|--..+. ...--++.|++.. .++-+ .-.-|..--+..++.-.+|+.|||
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk-~~k~Ke~R~~~v~k~~~iVm~vGD 201 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKK-DKKSKEVRRQAVEKDYKIVMLVGD 201 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEee-CCCcHHHHHHHHhhccceeeEecC
Confidence 34566677777777777776666544333 2333344565421 22221 111233333344455668999999
Q ss_pred CcccHHHH
Q 002310 797 GINDAAAL 804 (937)
Q Consensus 797 G~NDa~AL 804 (937)
..+|-...
T Consensus 202 Nl~DF~d~ 209 (274)
T COG2503 202 NLDDFGDN 209 (274)
T ss_pred chhhhcch
Confidence 99996544
No 260
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=34.14 E-value=4.2e+02 Score=34.45 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=26.4
Q ss_pred CeEEEEeCCCccCCcEEEEcCCCEEeeeEEEeecce
Q 002310 375 DSIIEVPCNSLHVGDHIVVLPGDRIPADGVVRAGRS 410 (937)
Q Consensus 375 g~~~~v~~~~L~~GDiV~v~~Ge~IPaDgvll~G~~ 410 (937)
|....+...|.+|-|.+.++ |+..=+|=-.+.|++
T Consensus 187 GDiV~l~~Gd~IPaD~~li~-g~~l~VdES~LTGES 221 (941)
T TIGR01517 187 GDIVSLSTGDVVPADGVFIS-GLSLEIDESSITGES 221 (941)
T ss_pred CCEEEECCCCEecccEEEEE-cCcEEEEecccCCCC
Confidence 57888999999999999986 444556666666665
No 261
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.52 E-value=1e+02 Score=33.68 Aligned_cols=67 Identities=22% Similarity=0.304 Sum_probs=47.5
Q ss_pred ecCcCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSAE------YVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.++++++.++-++.|++.|++ ..++-||++.... ..|+++||....+. ...+.++=.+.|+.|.+.
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d 86 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNAD 86 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567889999999999988887 5567799988654 46788999633222 234566666777777654
No 262
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=33.45 E-value=1e+02 Score=26.08 Aligned_cols=51 Identities=22% Similarity=0.267 Sum_probs=33.8
Q ss_pred HHHHHHHhcCCCEEEEEcCC-cccHHHHHhCCeeEEe---CC-ChHHH---HhhcCEEE
Q 002310 778 KRFINELQNDENVVAMVGDG-INDAAALASSHIGVAM---GG-GVGAA---SEVASVVL 828 (937)
Q Consensus 778 ~~iV~~Lq~~G~~VamvGDG-~NDa~AL~~AdVGIam---g~-gt~~a---~~aADivL 828 (937)
....+.+.-....+.||||. ..|..+-+++++--.+ |. ..+.. ...+|+|+
T Consensus 11 ~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 11 EQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 34455554445679999999 9999999999875433 31 22222 24788876
No 263
>PRK04302 triosephosphate isomerase; Provisional
Probab=32.90 E-value=3.3e+02 Score=28.57 Aligned_cols=86 Identities=17% Similarity=0.254 Sum_probs=53.9
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEe-------------ccChhhHHHHHHHHhcC-CCE
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLS-------------GVKPNEKKRFINELQND-ENV 790 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~a-------------r~~Pe~K~~iV~~Lq~~-G~~ 790 (937)
+-+++.+.++.+++.|+.+++.+|+..+ +..+ .+.+- +-+.. ..+|++-.++++.+++. ...
T Consensus 99 ~~~e~~~~v~~a~~~Gl~~I~~v~~~~~-~~~~-~~~~~--~~I~~~p~~~igt~~~~~~~~~~~i~~~~~~ir~~~~~~ 174 (223)
T PRK04302 99 TLADIEAVVERAKKLGLESVVCVNNPET-SAAA-AALGP--DYVAVEPPELIGTGIPVSKAKPEVVEDAVEAVKKVNPDV 174 (223)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEcCCHHH-HHHH-hcCCC--CEEEEeCccccccCCCCCcCCHHHHHHHHHHHHhccCCC
Confidence 4456889999999999999999998443 3333 33332 22221 13577777777888763 244
Q ss_pred EEEEcCCcccHHHHHh---CC-eeEEeC
Q 002310 791 VAMVGDGINDAAALAS---SH-IGVAMG 814 (937)
Q Consensus 791 VamvGDG~NDa~AL~~---Ad-VGIamg 814 (937)
..+.|-|+|+....+. ++ =|+.+|
T Consensus 175 pvi~GggI~~~e~~~~~~~~gadGvlVG 202 (223)
T PRK04302 175 KVLCGAGISTGEDVKAALELGADGVLLA 202 (223)
T ss_pred EEEEECCCCCHHHHHHHHcCCCCEEEEe
Confidence 5567888876654433 33 345554
No 264
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=32.58 E-value=1.9e+02 Score=29.37 Aligned_cols=119 Identities=13% Similarity=0.170 Sum_probs=72.2
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC-----CCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHH
Q 002310 730 AHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVG-----IPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAAL 804 (937)
Q Consensus 730 ~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~G-----I~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL 804 (937)
.+.++.+.+.|.++.++ |-+++++...++.+. +.-.-.+.-.+|++-.++++.+.+.+..+.+||=|.-==...
T Consensus 38 ~~l~~~~~~~~~~vfll-G~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~PkQE~~ 116 (177)
T TIGR00696 38 EELCQRAGKEKLPIFLY-GGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPKQEIW 116 (177)
T ss_pred HHHHHHHHHcCCeEEEE-CCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcHhHHH
Confidence 45667777788888888 777777777666653 320011223457777889999999999999999985332211
Q ss_pred -------HhCCeeEEeCCChHHHH---hhcCEEEeCCChhHHHHHHHHHHHHHHH
Q 002310 805 -------ASSHIGVAMGGGVGAAS---EVASVVLMGNRLSQLLVALELSRLTMKT 849 (937)
Q Consensus 805 -------~~AdVGIamg~gt~~a~---~aADivL~~~~l~~l~~~i~~~R~~~~~ 849 (937)
....|.|++|+.-|... .-|.-.+.+-+|..+..++.+=|+..+.
T Consensus 117 ~~~~~~~~~~~v~~gvGg~fd~~aG~~~rAP~w~~~~gLEWlyRl~~eP~R~~R~ 171 (177)
T TIGR00696 117 MRNHRHLKPDAVMIGVGGSFDVFSGLVKRAPRWLMRLGLEWLYRLRMEPWRWKRM 171 (177)
T ss_pred HHHhHHhCCCcEEEEeceeeeecccCcCcCCHHHHHhCchHHHHhhhCcHHHHHh
Confidence 12335555554333221 1233333444677777887776665544
No 265
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=32.33 E-value=1.7e+02 Score=31.37 Aligned_cols=79 Identities=15% Similarity=0.173 Sum_probs=53.2
Q ss_pred cCcCChhHHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHHcCCC---C--ceeEeccChhhHHHHHHHHhcCCCEEEE
Q 002310 722 EDRIRDDAAHVVNSLSSQ---GIGVYMLSGDKKNSAEYVASLVGIP---K--DKVLSGVKPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L~~a---GI~v~mlTGD~~~tA~~iA~~~GI~---~--~~v~ar~~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
.+.|.||..++|+.+++. |+.|+-++-|++..|++++.. |-+ + .-+-.+.-... .+.|+.+++.-.+-.+
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~-G~~~vmPlg~pIGsg~Gi~~-~~~I~~I~e~~~vpVI 179 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA-GCAAVMPLGSPIGSGQGLLN-PYNLRIIIERADVPVI 179 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CCCEeCCCCcCCCCCCCCCC-HHHHHHHHHhCCCcEE
Confidence 456799999999999998 999997888999999998876 532 1 11222222222 5666666665445566
Q ss_pred EcCCcccHH
Q 002310 794 VGDGINDAA 802 (937)
Q Consensus 794 vGDG~NDa~ 802 (937)
++-|++-..
T Consensus 180 ~egGI~tpe 188 (248)
T cd04728 180 VDAGIGTPS 188 (248)
T ss_pred EeCCCCCHH
Confidence 776665543
No 266
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=32.28 E-value=2e+02 Score=26.56 Aligned_cols=66 Identities=18% Similarity=0.333 Sum_probs=46.1
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChh-hHHHHHHHHhcCCCE
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPN-EKKRFINELQNDENV 790 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe-~K~~iV~~Lq~~G~~ 790 (937)
++.+.|.-|++..+.++.|.+.|+++. .|+ .|+..+.+ .|++-..+.. . ++ ...++.+.++++|++
T Consensus 3 ~isv~d~~K~~~~~~a~~l~~~G~~i~-AT~---gTa~~L~~-~Gi~~~~v~~-~-~~~g~~~i~~~i~~~g~i 69 (112)
T cd00532 3 FLSVSDHVKAMLVDLAPKLSSDGFPLF-ATG---GTSRVLAD-AGIPVRAVSK-R-HEDGEPTVDAAIAEKGKF 69 (112)
T ss_pred EEEEEcccHHHHHHHHHHHHHCCCEEE-ECc---HHHHHHHH-cCCceEEEEe-c-CCCCCcHHHHHHhCCCCE
Confidence 567889999999999999999999985 675 47777765 8986333321 1 22 335577777653553
No 267
>KOG0105 consensus Alternative splicing factor ASF/SF2 (RRM superfamily) [RNA processing and modification]
Probab=32.24 E-value=2.7e+02 Score=28.20 Aligned_cols=44 Identities=18% Similarity=0.174 Sum_probs=33.2
Q ss_pred EEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecC
Q 002310 128 IILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVS 172 (937)
Q Consensus 128 ~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~ 172 (937)
..+.|.|+--...-+-++..+.+-..|--++|. ..++-.|+|..
T Consensus 116 ~RVvVsGLp~SgSWQDLKDHmReaGdvCfadv~-rDg~GvV~~~r 159 (241)
T KOG0105|consen 116 YRVVVSGLPPSGSWQDLKDHMREAGDVCFADVQ-RDGVGVVEYLR 159 (241)
T ss_pred eeEEEecCCCCCchHHHHHHHHhhCCeeeeeee-cccceeeeeee
Confidence 456789999888888899999998888777765 34466676643
No 268
>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function.; PDB: 3BPD_I 2RAQ_F 2X3D_E.
Probab=32.14 E-value=75 Score=28.60 Aligned_cols=69 Identities=13% Similarity=0.087 Sum_probs=46.9
Q ss_pred cEEEEEecCCCChhHHHHHHHHhhcCCCceEEEee-----cCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCcccc
Q 002310 126 DVIILDVGGMTCGGCAASVKRILESQPQVSSASVN-----LTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSS 200 (937)
Q Consensus 126 ~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn-----~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~ 200 (937)
+++.|.|-=.+-++-. -+-+.|.+++||..+++. -.+..+.|.......+. +++.++|++.|-..+
T Consensus 5 rRlVLDVlKP~~p~i~-e~A~~l~~~~gV~gVnitv~EvD~ete~lkitiEG~~id~--------d~i~~~Ie~~Gg~IH 75 (95)
T PF02680_consen 5 RRLVLDVLKPHEPSIV-ELAKALSELEGVDGVNITVVEVDVETENLKITIEGDDIDF--------DEIKEAIEELGGVIH 75 (95)
T ss_dssp EEEEEEEEEESSS-HH-HHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEEEESSE-H--------HHHHHHHHHTT-EEE
T ss_pred eEEEEEeecCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEeCCCCH--------HHHHHHHHHcCCeEE
Confidence 4566666555545443 577889999999887654 46667777776666665 889999999998765
Q ss_pred ccc
Q 002310 201 LRD 203 (937)
Q Consensus 201 ~~~ 203 (937)
-.+
T Consensus 76 SID 78 (95)
T PF02680_consen 76 SID 78 (95)
T ss_dssp EEE
T ss_pred eee
Confidence 443
No 269
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=32.03 E-value=1e+02 Score=34.04 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHH-HHHHHcC
Q 002310 727 DDAAHVVNSLSSQGIGVYMLSGDKKNSAE-YVASLVG 762 (937)
Q Consensus 727 ~~a~e~I~~L~~aGI~v~mlTGD~~~tA~-~iA~~~G 762 (937)
+++...-..|++.|.+++++|.+....+. +..+.++
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~ 99 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAG 99 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHh
Confidence 35666677788888888888866544433 3444444
No 270
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=31.85 E-value=86 Score=35.33 Aligned_cols=57 Identities=26% Similarity=0.349 Sum_probs=46.2
Q ss_pred cCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCcccHHHHHh
Q 002310 747 SGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGINDAAALAS 806 (937)
Q Consensus 747 TGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~NDa~AL~~ 806 (937)
+|.+-.-...-|+.+||+...+.-..+|.+|.+-++. .|..|-..||..+|+-+.+.
T Consensus 82 aGNHaQGvA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~---~GaeVil~g~~~dda~~~a~ 138 (347)
T COG1171 82 AGNHAQGVAYAAKRLGIKATIVMPETTPKIKVDATRG---YGAEVILHGDNFDDAYAAAE 138 (347)
T ss_pred CCcHHHHHHHHHHHhCCCEEEEecCCCcHHHHHHHHh---cCCEEEEECCCHHHHHHHHH
Confidence 3777777778899999987778889999999887765 47788888988888876654
No 271
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=31.56 E-value=26 Score=35.35 Aligned_cols=13 Identities=54% Similarity=0.687 Sum_probs=12.2
Q ss_pred EEEeCCCccCCCc
Q 002310 578 VVFDKTGTLTIGR 590 (937)
Q Consensus 578 i~fDKTGTLT~~~ 590 (937)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999987
No 272
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=30.80 E-value=1.8e+02 Score=30.56 Aligned_cols=62 Identities=15% Similarity=0.305 Sum_probs=47.7
Q ss_pred hHHHHHHHHHhCCCeEEEEcCCCH-----HHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEE
Q 002310 728 DAAHVVNSLSSQGIGVYMLSGDKK-----NSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAM 793 (937)
Q Consensus 728 ~a~e~I~~L~~aGI~v~mlTGD~~-----~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~Vam 793 (937)
+..+++.++++.|++ .+++||+. ....++++++|+. +++=+--.+|.++++.+.+.|-....
T Consensus 74 ~l~~~l~~~~~~g~~-~vv~G~i~sd~~~~~~e~v~~~~gl~---~~~PLw~~~~~el~~~~~~~G~~~~i 140 (218)
T TIGR03679 74 DLKGALKELKREGVE-GIVTGAIASRYQKSRIERICEELGLK---VFAPLWGRDQEEYLRELVERGFRFII 140 (218)
T ss_pred HHHHHHHHHHHcCCC-EEEECCcccHhHHHHHHHHHHhCCCe---EEeehhcCCHHHHHHHHHHCCCEEEE
Confidence 366778888877888 56789985 4566899999994 66666667889999999999875444
No 273
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=30.76 E-value=75 Score=32.06 Aligned_cols=71 Identities=23% Similarity=0.259 Sum_probs=53.7
Q ss_pred cCcCChhHHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCC
Q 002310 722 EDRIRDDAAHVVNSL-SSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDG 797 (937)
Q Consensus 722 ~D~lr~~a~e~I~~L-~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG 797 (937)
.+-.=+++.+.++++ .+.|.+|++-.| .||..+.+..+++ .|--..+..|=.+.++..++.+.+++++|-.
T Consensus 15 ~~~~~e~~v~~a~~~~~~~g~dViIsRG---~ta~~lr~~~~iP--VV~I~~s~~Dil~al~~a~~~~~~Iavv~~~ 86 (176)
T PF06506_consen 15 IEASLEEAVEEARQLLESEGADVIISRG---GTAELLRKHVSIP--VVEIPISGFDILRALAKAKKYGPKIAVVGYP 86 (176)
T ss_dssp EE--HHHHHHHHHHHHTTTT-SEEEEEH---HHHHHHHCC-SS---EEEE---HHHHHHHHHHCCCCTSEEEEEEES
T ss_pred EEecHHHHHHHHHHhhHhcCCeEEEECC---HHHHHHHHhCCCC--EEEECCCHhHHHHHHHHHHhcCCcEEEEecc
Confidence 344456778888888 789999999988 5888899999887 7888899999999999999899999999875
No 274
>COG1888 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.55 E-value=2.1e+02 Score=25.52 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=44.9
Q ss_pred ccEEEEEecCCCChhHHHHHHHHhhcCCCceEEEe-----ecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccc
Q 002310 125 SDVIILDVGGMTCGGCAASVKRILESQPQVSSASV-----NLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKS 199 (937)
Q Consensus 125 ~~~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~V-----n~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~ 199 (937)
..++.+.+--.+-.--.--+-+.|.+++||+.+++ +..+....+.......+- ++|.+.|++.|-..
T Consensus 5 iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldy--------dei~~~iE~~Gg~I 76 (97)
T COG1888 5 IRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDY--------DEIEEVIEELGGAI 76 (97)
T ss_pred ceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCH--------HHHHHHHHHcCCee
Confidence 34556666544422223346677888888877654 345566666655555554 78999999999876
Q ss_pred cccc
Q 002310 200 SLRD 203 (937)
Q Consensus 200 ~~~~ 203 (937)
+-.+
T Consensus 77 HSiD 80 (97)
T COG1888 77 HSID 80 (97)
T ss_pred eehh
Confidence 5443
No 275
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.29 E-value=1.1e+02 Score=33.40 Aligned_cols=67 Identities=25% Similarity=0.326 Sum_probs=46.9
Q ss_pred ecCcCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSAE------YVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.+.++++.++-++.|++.|++ ..++-||++.... ..|+++||....+. ...+.++=.+.|+.|.+.
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D 86 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHD 86 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4467888999999999988886 4667799987654 46889999643332 234556666667776554
No 276
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=30.19 E-value=1.4e+02 Score=25.86 Aligned_cols=47 Identities=36% Similarity=0.364 Sum_probs=35.2
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHcCCC
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYM-LSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~m-lTGD~~~tA~~iA~~~GI~ 764 (937)
++.+.+..++.+.+..+.|++.|+++.+ ..+.+..--..-|.+.|++
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445667888999999999999999887 4555555666677777764
No 277
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=30.13 E-value=1.9e+02 Score=31.84 Aligned_cols=96 Identities=17% Similarity=0.340 Sum_probs=60.2
Q ss_pred CCeEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HcCCC---CceeEeccChhh
Q 002310 703 NQSLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS---LVGIP---KDKVLSGVKPNE 776 (937)
Q Consensus 703 ~~~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~---~~GI~---~~~v~ar~~Pe~ 776 (937)
+...+.+..| |++...+.+=|++.|+++.|++.|-++..+|-..-.+-+..++ ++|+. .+++++ |.
T Consensus 21 ~~DtfifDcD----GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~s---sa- 92 (306)
T KOG2882|consen 21 SFDTFIFDCD----GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFS---SA- 92 (306)
T ss_pred hcCEEEEcCC----cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccC---hH-
Confidence 3334444445 5667789999999999999999998899999888777666554 56654 223331 21
Q ss_pred HHHHHHHHhcC---CCEEEEEc-CCcccHHHHHhCCe
Q 002310 777 KKRFINELQND---ENVVAMVG-DGINDAAALASSHI 809 (937)
Q Consensus 777 K~~iV~~Lq~~---G~~VamvG-DG~NDa~AL~~AdV 809 (937)
..+...|++. ++.|-.+| +|+++ -|++|.+
T Consensus 93 -~~~a~ylk~~~~~~k~Vyvig~~gi~~--eL~~aG~ 126 (306)
T KOG2882|consen 93 -YAIADYLKKRKPFGKKVYVIGEEGIRE--ELDEAGF 126 (306)
T ss_pred -HHHHHHHHHhCcCCCeEEEecchhhhH--HHHHcCc
Confidence 2334444332 34555544 56666 3566553
No 278
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=29.35 E-value=3.8e+02 Score=29.19 Aligned_cols=62 Identities=19% Similarity=0.274 Sum_probs=48.3
Q ss_pred CCCeEEEEEECCEEEEEEEecC--cCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCC
Q 002310 702 MNQSLVYVGVDNMLAGLIYVED--RIRDDAAHVVNSLSSQ-GIGVYMLSGDKKNSAEYVASLVGI 763 (937)
Q Consensus 702 ~~~~~~~v~~~~~~lG~i~l~D--~lr~~a~e~I~~L~~a-GI~v~mlTGD~~~tA~~iA~~~GI 763 (937)
...+.+++..||++.-++...+ .+-++..++++.|... ...|+|+||-...-......--||
T Consensus 16 a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 16 ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred ccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 4567888999998877666554 5666889999999877 456999999999988877764444
No 279
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=29.06 E-value=29 Score=30.46 Aligned_cols=23 Identities=30% Similarity=0.546 Sum_probs=16.8
Q ss_pred EeCCCccCCcEEEE-cCCCEEeee
Q 002310 380 VPCNSLHVGDHIVV-LPGDRIPAD 402 (937)
Q Consensus 380 v~~~~L~~GDiV~v-~~Ge~IPaD 402 (937)
+.-.+|.+||.|.| +.||.||-=
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I 68 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKI 68 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceE
Confidence 44578999999998 579999953
No 280
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=28.96 E-value=3.2e+02 Score=26.24 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=45.1
Q ss_pred CEEEEEEEecCcCChhHHHHHHHHHhCCC-eEEEEcCCCH-------HHHHHHHHHcCCCCceeEeccChhhHHHHHHHH
Q 002310 713 NMLAGLIYVEDRIRDDAAHVVNSLSSQGI-GVYMLSGDKK-------NSAEYVASLVGIPKDKVLSGVKPNEKKRFINEL 784 (937)
Q Consensus 713 ~~~lG~i~l~D~lr~~a~e~I~~L~~aGI-~v~mlTGD~~-------~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~L 784 (937)
-.++|+-++.-.--+..+++++.|+++|+ .+.++=|-.. ..-+.-.+++|++ .+|..-+|- .+++..|
T Consensus 51 adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv~--~vf~pgt~~--~~i~~~l 126 (128)
T cd02072 51 ADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGFD--RVFAPGTPP--EEAIADL 126 (128)
T ss_pred CCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHHHHHHcCCC--EEECcCCCH--HHHHHHH
Confidence 35777777777788899999999999998 5544434432 2234567888986 777644322 2344444
Q ss_pred h
Q 002310 785 Q 785 (937)
Q Consensus 785 q 785 (937)
+
T Consensus 127 ~ 127 (128)
T cd02072 127 K 127 (128)
T ss_pred h
Confidence 3
No 281
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=28.73 E-value=2e+02 Score=30.64 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=47.2
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHH----------HHHHHHcCCCCcee---EeccChhhHHHHHHHHhcCCCEEE
Q 002310 726 RDDAAHVVNSLSSQGIGVYMLSGDKKNSA----------EYVASLVGIPKDKV---LSGVKPNEKKRFINELQNDENVVA 792 (937)
Q Consensus 726 r~~a~e~I~~L~~aGI~v~mlTGD~~~tA----------~~iA~~~GI~~~~v---~ar~~Pe~K~~iV~~Lq~~G~~Va 792 (937)
++-.++-|+.+|+.||.| .||+..... ..-|+++|.+.-.+ +-.+.+++|.++|+..++.|-+|.
T Consensus 40 ~~~l~eki~la~~~~V~v--~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~IEiS~G~~~i~~~~~~rlI~~~~~~g~~v~ 117 (237)
T TIGR03849 40 RDIVKEKIEMYKDYGIKV--YPGGTLFEIAHSKGKFDEYLNECDELGFEAVEISDGSMEISLEERCNLIERAKDNGFMVL 117 (237)
T ss_pred HHHHHHHHHHHHHcCCeE--eCCccHHHHHHHhhhHHHHHHHHHHcCCCEEEEcCCccCCCHHHHHHHHHHHHhCCCeEe
Confidence 345788999999998875 588733222 23678888753322 445789999999999999887665
Q ss_pred E
Q 002310 793 M 793 (937)
Q Consensus 793 m 793 (937)
-
T Consensus 118 ~ 118 (237)
T TIGR03849 118 S 118 (237)
T ss_pred c
Confidence 3
No 282
>PF15584 Imm44: Immunity protein 44
Probab=28.63 E-value=23 Score=31.41 Aligned_cols=20 Identities=30% Similarity=0.541 Sum_probs=16.0
Q ss_pred CCcEEEEcCCCEEeeeEEEe
Q 002310 387 VGDHIVVLPGDRIPADGVVR 406 (937)
Q Consensus 387 ~GDiV~v~~Ge~IPaDgvll 406 (937)
+-+..+|+.|++|||||+-.
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 44556889999999999853
No 283
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=28.58 E-value=65 Score=35.13 Aligned_cols=84 Identities=14% Similarity=0.162 Sum_probs=49.1
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcC-CCHHH-------------HHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEE
Q 002310 726 RDDAAHVVNSLSSQGIGVYMLSG-DKKNS-------------AEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVV 791 (937)
Q Consensus 726 r~~a~e~I~~L~~aGI~v~mlTG-D~~~t-------------A~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~V 791 (937)
-+++.++++.|++.|+ ..++|. |.... +..+....|-.. .....-+|+-=..+++.+.-....+
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~-~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQP-LVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCce-eccCCCCHHHHHHHHHHhCCChhhE
Confidence 5789999999999898 556664 32111 111111112210 1122233333334455554445789
Q ss_pred EEEcCCc-ccHHHHHhCCeeE
Q 002310 792 AMVGDGI-NDAAALASSHIGV 811 (937)
Q Consensus 792 amvGDG~-NDa~AL~~AdVGI 811 (937)
.||||.. .|..+-++|.+--
T Consensus 223 lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred EEECCChHHHHHHHHHcCCcE
Confidence 9999995 9999999988754
No 284
>PF09874 DUF2101: Predicted membrane protein (DUF2101); InterPro: IPR018663 This family of conserved hypothetical proteins has no known function.
Probab=28.05 E-value=1.9e+02 Score=29.76 Aligned_cols=12 Identities=25% Similarity=0.456 Sum_probs=6.6
Q ss_pred CCccCCcEEEEc
Q 002310 383 NSLHVGDHIVVL 394 (937)
Q Consensus 383 ~~L~~GDiV~v~ 394 (937)
.|+++||+|.+.
T Consensus 180 ~d~~~G~vVKl~ 191 (206)
T PF09874_consen 180 PDVEEGDVVKLL 191 (206)
T ss_pred CCCCCCceEEEE
Confidence 355566655554
No 285
>PRK11018 hypothetical protein; Provisional
Probab=27.85 E-value=1.3e+02 Score=25.91 Aligned_cols=57 Identities=14% Similarity=0.058 Sum_probs=42.3
Q ss_pred EEEEEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 127 VIILDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 127 ~~~l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
..++++.|..|+.-.-..+++|++++.=+. +.|..|..... +.+....++.||++..
T Consensus 8 ~~~lD~rG~~CP~Pvl~~kk~l~~l~~G~~---------L~V~~d~~~a~---------~di~~~~~~~G~~v~~ 64 (78)
T PRK11018 8 DYRLDMVGEPCPYPAVATLEALPQLKKGEI---------LEVVSDCPQSI---------NNIPLDARNHGYTVLD 64 (78)
T ss_pred CeeEECCCCcCCHHHHHHHHHHHhCCCCCE---------EEEEeCCccHH---------HHHHHHHHHcCCEEEE
Confidence 367999999999999999999999863322 34444433322 6788999999999753
No 286
>TIGR00603 rad25 DNA repair helicase rad25. All proteins in this family for which functions are known are DNA-DNA helicases used for the initiation of nucleotide excision repair and transacription as part of the TFIIH complex.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=27.01 E-value=2.5e+02 Score=35.15 Aligned_cols=77 Identities=16% Similarity=0.264 Sum_probs=54.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCC-EEEE---EcCCcccHHHHHhC
Q 002310 732 VVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDEN-VVAM---VGDGINDAAALASS 807 (937)
Q Consensus 732 ~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~-~Vam---vGDG~NDa~AL~~A 807 (937)
.++.-...|-++++.+ |+...+..+++.++.. .++..+++++..++++.+|+.+. .|++ |||-.=|. -.|
T Consensus 488 Li~~he~~g~kiLVF~-~~~~~l~~~a~~L~~~--~I~G~ts~~ER~~il~~Fr~~~~i~vLv~SkVgdeGIDl---P~a 561 (732)
T TIGR00603 488 LIRFHEQRGDKIIVFS-DNVFALKEYAIKLGKP--FIYGPTSQQERMQILQNFQHNPKVNTIFLSKVGDTSIDL---PEA 561 (732)
T ss_pred HHHHHhhcCCeEEEEe-CCHHHHHHHHHHcCCc--eEECCCCHHHHHHHHHHHHhCCCccEEEEecccccccCC---CCC
Confidence 3443334778888887 5667899999999975 78899999999999999986544 4444 44433343 356
Q ss_pred CeeEEeC
Q 002310 808 HIGVAMG 814 (937)
Q Consensus 808 dVGIamg 814 (937)
++.|-+.
T Consensus 562 ~vvI~~s 568 (732)
T TIGR00603 562 NVLIQIS 568 (732)
T ss_pred CEEEEeC
Confidence 7777653
No 287
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=26.96 E-value=1.1e+02 Score=28.49 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=28.8
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 002310 726 RDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 726 r~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~ 764 (937)
-+++.++++.+++.|++++.+|++.+ -...+.+.|+.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 46788999999999999999998874 33456655653
No 288
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=26.83 E-value=1.7e+02 Score=32.78 Aligned_cols=78 Identities=21% Similarity=0.439 Sum_probs=60.2
Q ss_pred EEEecCcCChhHHHHHHHHHhC-CCeEEEEcCCC---HHHHHHHHHHcCCCCc------eeEeccChhhHHHHHHHHhcC
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQ-GIGVYMLSGDK---KNSAEYVASLVGIPKD------KVLSGVKPNEKKRFINELQND 787 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~a-GI~v~mlTGD~---~~tA~~iA~~~GI~~~------~v~ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.+++|+-|-+...++.++.++ |+.+. +--|+ .+..+.+++.+||++- .+.+-+.|++=.++++.|++.
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~-I~ee~Ipv~~eVr~vce~lGiDPl~~anEG~lv~~V~~~~a~~~l~~L~~~ 297 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGIS-IEEEKIPVREEVRGVCELLGLDPLELANEGKLVIAVPPEHAEEVLEALRSH 297 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEE-EeeccccccHHHHHHHHHhCCCHHHhhcCceEEEEECHHHHHHHHHHHHhc
Confidence 6779999999999999988654 55544 44555 4678999999999763 466778899888899999999
Q ss_pred C-CEEEEEcC
Q 002310 788 E-NVVAMVGD 796 (937)
Q Consensus 788 G-~~VamvGD 796 (937)
| .-...+|-
T Consensus 298 ~~~~A~iIGe 307 (339)
T COG0309 298 GLKDAAIIGE 307 (339)
T ss_pred CCccceeEEE
Confidence 8 45555543
No 289
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.82 E-value=1.1e+02 Score=33.48 Aligned_cols=67 Identities=19% Similarity=0.290 Sum_probs=45.5
Q ss_pred ecCcCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSAE------YVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.++++++.++-++.|++.|++ +.++.||++.... ..|+++||.-..+. ...+.++=.+.|+.|.+.
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 87 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNED 87 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567889999999999988886 5677899988664 46788999532211 223344455666666554
No 290
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=26.75 E-value=1.2e+02 Score=30.45 Aligned_cols=63 Identities=16% Similarity=0.156 Sum_probs=45.6
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhc--C-cccccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSC--G-FKSSLR 202 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~--G-y~~~~~ 202 (937)
..=+..|++.+.+++||.++.|-...+.+.|-++.+.. ....+.+..++.+++++. + |.+.+.
T Consensus 74 ~~~a~~i~~~v~~~~~V~~A~vvv~~~~a~Vav~~~~~--~~~~~~i~~~V~~~v~~~~p~~~~V~Vs 139 (177)
T PF09580_consen 74 QQLADRIANRVKKVPGVEDATVVVTDDNAYVAVDLDFN--RFNTKKIKKKVEKAVKSADPRIYNVYVS 139 (177)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEEECCEEEEEEEeccc--ccchhHHHHHHHHHHHHhCCCccEEEEE
Confidence 45678999999999999999999999999998877621 122334446666777664 2 555543
No 291
>COG4371 Predicted membrane protein [Function unknown]
Probab=26.68 E-value=78 Score=33.37 Aligned_cols=10 Identities=30% Similarity=0.179 Sum_probs=4.0
Q ss_pred cccCCcCCCC
Q 002310 71 MSSCAASFGA 80 (937)
Q Consensus 71 ~~~~~~~~~~ 80 (937)
+|--+++.++
T Consensus 68 YS~~gpsGGg 77 (334)
T COG4371 68 YSGGGPSGGG 77 (334)
T ss_pred cCCCCCCCCC
Confidence 4433444433
No 292
>cd03420 SirA_RHOD_Pry_redox SirA_RHOD_Pry_redox. SirA-like domain located within a multidomain protein of unknown function. Other domains include RHOD (rhodanese homology domain), and Pry_redox (pyridine nucleotide-disulphide oxidoreductase) as well as a C-terminal domain that corresponds to COG2210. This fold is referred to as a two-layered alpha/beta sandwich, structurally similar to that of translation initiation factor 3.
Probab=26.51 E-value=1.3e+02 Score=25.30 Aligned_cols=54 Identities=17% Similarity=0.147 Sum_probs=39.8
Q ss_pred EEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 130 l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
+.+.|+.|+.=.-...++|++++.= +.+.|..|..... +++....++.||+...
T Consensus 2 lD~rG~~CP~Pvl~~kkal~~l~~G---------~~l~V~~d~~~a~---------~di~~~~~~~G~~~~~ 55 (69)
T cd03420 2 VDACGLQCPGPILKLKKEIDKLQDG---------EQLEVKASDPGFA---------RDAQAWCKSTGNTLIS 55 (69)
T ss_pred cccCCCcCCHHHHHHHHHHHcCCCC---------CEEEEEECCccHH---------HHHHHHHHHcCCEEEE
Confidence 5788999999999999999988632 2344444433322 6799999999999764
No 293
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=26.44 E-value=1.5e+02 Score=27.62 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=41.8
Q ss_pred HHHHHHHHHhCCCeEEEEc-CCCHH-------HHHHHHHHcCCCCc---eeEeccChhhHHHHHHHHhcC-CCEEEEEcC
Q 002310 729 AAHVVNSLSSQGIGVYMLS-GDKKN-------SAEYVASLVGIPKD---KVLSGVKPNEKKRFINELQND-ENVVAMVGD 796 (937)
Q Consensus 729 a~e~I~~L~~aGI~v~mlT-GD~~~-------tA~~iA~~~GI~~~---~v~ar~~Pe~K~~iV~~Lq~~-G~~VamvGD 796 (937)
.++-++.|+++|++.+|.= .|.+. .-.+.|+++||.-. ......++++=..+.+.+.+. +.+.++|.-
T Consensus 16 ~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~~~~~~~v~~f~~~l~~~~~Pvl~hC~s 95 (110)
T PF04273_consen 16 SPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGGAITEEDVEAFADALESLPKPVLAHCRS 95 (110)
T ss_dssp -HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TTT--HHHHHHHHHHHHTTTTSEEEE-SC
T ss_pred CHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCCCCCHHHHHHHHHHHHhCCCCEEEECCC
Confidence 3567889999999966653 44322 13478999998310 223567788888888888865 455566766
Q ss_pred CcccHHHH
Q 002310 797 GINDAAAL 804 (937)
Q Consensus 797 G~NDa~AL 804 (937)
|. .+.+|
T Consensus 96 G~-Ra~~l 102 (110)
T PF04273_consen 96 GT-RASAL 102 (110)
T ss_dssp SH-HHHHH
T ss_pred Ch-hHHHH
Confidence 64 44443
No 294
>PTZ00445 p36-lilke protein; Provisional
Probab=26.26 E-value=1.4e+02 Score=31.27 Aligned_cols=70 Identities=21% Similarity=0.224 Sum_probs=48.3
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC--CCceeEeccChhhHHHHHHHHhcCCCEEEEE
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI--PKDKVLSGVKPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI--~~~~v~ar~~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
..++.+..-++.|++.||+++.+-=|+-..+..-+--..= +...+...++|+=|. +++.|++.|-.|+.|
T Consensus 26 ~~~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~-~~~~l~~~~I~v~VV 97 (219)
T PTZ00445 26 NPHESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKI-LGKRLKNSNIKISVV 97 (219)
T ss_pred CHHHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHH-HHHHHHHCCCeEEEE
Confidence 4567788899999999999999877776665333221110 112466678998776 688888887766665
No 295
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=26.08 E-value=1.2e+02 Score=32.41 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=53.4
Q ss_pred hhHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCCC--ceeE-----eccChhhH--HHHHHHHhcCCCEEEEEcC
Q 002310 727 DDAAHVVNSLSSQGIGVYMLS-GDKKNSAEYVASLVGIPK--DKVL-----SGVKPNEK--KRFINELQNDENVVAMVGD 796 (937)
Q Consensus 727 ~~a~e~I~~L~~aGI~v~mlT-GD~~~tA~~iA~~~GI~~--~~v~-----ar~~Pe~K--~~iV~~Lq~~G~~VamvGD 796 (937)
++..++++.||+.|..+.++| .|...- .+-..+|+.. +.+. .-..|+-+ ...++.+..+-.-+.++||
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~--~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD 193 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRLR--LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGD 193 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHHH--HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecC
Confidence 455599999999998888888 444433 5666666631 0111 11345544 3455666666778999999
Q ss_pred C-cccHHHHHhCCe
Q 002310 797 G-INDAAALASSHI 809 (937)
Q Consensus 797 G-~NDa~AL~~AdV 809 (937)
. .||..+-+.+..
T Consensus 194 ~l~nD~~gA~~~G~ 207 (237)
T KOG3085|consen 194 LLENDYEGARNLGW 207 (237)
T ss_pred ccccccHhHHHcCC
Confidence 5 899987777654
No 296
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=25.90 E-value=1.7e+02 Score=29.24 Aligned_cols=56 Identities=20% Similarity=0.096 Sum_probs=40.0
Q ss_pred hHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHh
Q 002310 139 GCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTS 194 (937)
Q Consensus 139 ~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~ 194 (937)
.=+..|.+.+.++|||.++.+-...+.+.|-++.+.......-.++..++.+++++
T Consensus 54 ~~A~~Ia~~v~~v~~V~dA~vvVtg~~A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 54 DVADEIASEAAKVKGVKDATVVITGNYAYVGVDLTNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHHHHhcCCCCceEEEEEECCEEEEEEEcCCCcchhhHHHHHHHHHHHHHh
Confidence 67889999999999999999999999999988765433211112223345555554
No 297
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.82 E-value=1.4e+02 Score=33.01 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=47.2
Q ss_pred ecCcCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCcee--EeccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQ-GIG---VYMLSGDKKNSA------EYVASLVGIPKDKV--LSGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~a-GI~---v~mlTGD~~~tA------~~iA~~~GI~~~~v--~ar~~Pe~K~~iV~~Lq~~ 787 (937)
+..+++++.++.++.|++. |++ ..++-||++... ...|+++||.-+.+ -...+.++=.+.|+.|.+.
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d 88 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNAD 88 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567889999999999877 776 456669888755 44678999963222 1356677777777777665
No 298
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.67 E-value=1.4e+02 Score=32.90 Aligned_cols=67 Identities=24% Similarity=0.284 Sum_probs=46.2
Q ss_pred ecCcCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSAE------YVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.+.+|++.++-++.|++.|++ ..++-||++.... ..|+++||.-..+. ...+.++=.+.|+.|.+.
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d 88 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRD 88 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCC
Confidence 4567889999999999988876 3566799887654 46788999632222 224456666677777554
No 299
>PRK14018 trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Provisional
Probab=25.65 E-value=78 Score=37.84 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=34.4
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCC------------------eeEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTE------------------TAIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~------------------~~~V~~d~~~~~~ 177 (937)
++|=|-+|....+++||.+++|-++.+ .+.|.|||..++.
T Consensus 205 gGCFWg~e~~f~~~~GV~~t~~GYagG~~~~PtY~~Vc~gtgH~E~V~V~yDp~~is~ 262 (521)
T PRK14018 205 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVYRHSGHAETVKVTYDADKLSL 262 (521)
T ss_pred cCCchhhHHHHccCCCEEEEEEeeCCCCCCCCChhhccCCCCcEEEEEEEECCCcCcH
Confidence 589999999999999999999877554 3678999999886
No 300
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=25.22 E-value=1.7e+02 Score=31.54 Aligned_cols=72 Identities=10% Similarity=0.167 Sum_probs=44.8
Q ss_pred CcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHcC-------CCCceeEeccChhhHHHHHHHHhcCCCEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE---YVASLVG-------IPKDKVLSGVKPNEKKRFINELQNDENVVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~---~iA~~~G-------I~~~~v~ar~~Pe~K~~iV~~Lq~~G~~Va 792 (937)
+...++..+.|++++++|+.-.+++|++..... ++|++-. +-+.. ..+.++++=.++.+.++. ...|.
T Consensus 13 ~~~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~~v~~~~G~HP~~-~~~~~~~~~~~l~~~~~~-~~~vv 90 (256)
T COG0084 13 EEFDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYPNVYAAVGVHPLD-ADEHSEEDLEELEQLAEH-HPKVV 90 (256)
T ss_pred hhhcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCCCeEEEEeeCCCc-cccccHHHHHHHHHHHhc-CCCeE
Confidence 356677888999999999999999999988765 4555443 22212 112223333344444443 24577
Q ss_pred EEcC
Q 002310 793 MVGD 796 (937)
Q Consensus 793 mvGD 796 (937)
+||.
T Consensus 91 aIGE 94 (256)
T COG0084 91 AIGE 94 (256)
T ss_pred EEEe
Confidence 7775
No 301
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=24.98 E-value=2e+02 Score=28.75 Aligned_cols=65 Identities=15% Similarity=0.279 Sum_probs=37.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHH--HHcCCCCceeEec-cChhhHHHHHHHHhcCCCEEEEEcC
Q 002310 731 HVVNSLSSQGIGVYMLSGDKKNSAEYVA--SLVGIPKDKVLSG-VKPNEKKRFINELQNDENVVAMVGD 796 (937)
Q Consensus 731 e~I~~L~~aGI~v~mlTGD~~~tA~~iA--~~~GI~~~~v~ar-~~Pe~K~~iV~~Lq~~G~~VamvGD 796 (937)
..++.|++.|++++...||- ..+..|- +.+-=.+-+.++= ..-.|=..+|+.+|++|..|..+|-
T Consensus 70 ~l~~~l~~~Gf~pv~~kG~~-Dv~laIDame~~~~~~iD~~vLvSgD~DF~~Lv~~lre~G~~V~v~g~ 137 (160)
T TIGR00288 70 KLIEAVVNQGFEPIIVAGDV-DVRMAVEAMELIYNPNIDAVALVTRDADFLPVINKAKENGKETIVIGA 137 (160)
T ss_pred HHHHHHHHCCceEEEecCcc-cHHHHHHHHHHhccCCCCEEEEEeccHhHHHHHHHHHHCCCEEEEEeC
Confidence 35678888888887777743 2222221 1110011122222 2344667789999999999988874
No 302
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=24.96 E-value=3.4e+02 Score=28.46 Aligned_cols=68 Identities=19% Similarity=0.199 Sum_probs=39.4
Q ss_pred hHHHHHHHHHhCCCeEE-EEc------------CCCHHHHHHHHHHcCCCCceeEeccC---hhhH---HHHHHHHhcCC
Q 002310 728 DAAHVVNSLSSQGIGVY-MLS------------GDKKNSAEYVASLVGIPKDKVLSGVK---PNEK---KRFINELQNDE 788 (937)
Q Consensus 728 ~a~e~I~~L~~aGI~v~-mlT------------GD~~~tA~~iA~~~GI~~~~v~ar~~---Pe~K---~~iV~~Lq~~G 788 (937)
|+--++..+++.|.+|. ++| +...+.++.+|+.+||+. ....++ ++.- ...++.+++.|
T Consensus 9 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~--~~i~~~~~~~~~~~~l~~~l~~~~~~g 86 (218)
T TIGR03679 9 DSNYALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPL--VKIETSGEKEKEVEDLKGALKELKREG 86 (218)
T ss_pred HHHHHHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCE--EEEECCCCChHHHHHHHHHHHHHHHcC
Confidence 34445666677787763 434 345678899999999973 333333 3322 23344444456
Q ss_pred CEEEEEcCC
Q 002310 789 NVVAMVGDG 797 (937)
Q Consensus 789 ~~VamvGDG 797 (937)
......||=
T Consensus 87 ~~~vv~G~i 95 (218)
T TIGR03679 87 VEGIVTGAI 95 (218)
T ss_pred CCEEEECCc
Confidence 666666553
No 303
>PLN02363 phosphoribosylanthranilate isomerase
Probab=24.79 E-value=2e+02 Score=31.15 Aligned_cols=63 Identities=14% Similarity=0.091 Sum_probs=47.1
Q ss_pred EEEEEEEecCcCChh----HHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHHHcCCCCceeEeccChhh
Q 002310 714 MLAGLIYVEDRIRDD----AAHVVNSLSSQGIG-VYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNE 776 (937)
Q Consensus 714 ~~lG~i~l~D~lr~~----a~e~I~~L~~aGI~-v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~ 776 (937)
.++|++...+.+|.= +++.++.++..+++ |.+...+..+....++++++++--+++...+|+.
T Consensus 69 D~iGfIf~~~SpR~Vs~e~a~~I~~~l~~~~~~~VgVfv~~~~~~I~~~~~~~~ld~VQLHG~e~~~~ 136 (256)
T PLN02363 69 DFIGMILWPKSKRSISLSVAKEISQVAREGGAKPVGVFVDDDANTILRAADSSDLELVQLHGNGSRAA 136 (256)
T ss_pred CEEEEecCCCCCCcCCHHHHHHHHHhccccCccEEEEEeCCCHHHHHHHHHhcCCCEEEECCCCCHHH
Confidence 578999778888743 44444444444664 8899999999999999999998667777666654
No 304
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=24.71 E-value=1.6e+02 Score=32.56 Aligned_cols=84 Identities=18% Similarity=0.235 Sum_probs=57.1
Q ss_pred EEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCC---------------------ceeEeccChhh
Q 002310 719 IYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVAS-LVGIPK---------------------DKVLSGVKPNE 776 (937)
Q Consensus 719 i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~-~~GI~~---------------------~~v~ar~~Pe~ 776 (937)
+.+-|.+|. .+.|+++|+.|.+|.++|--....+.+.+. ..|++- -++.+|+-|+.
T Consensus 161 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~mqgRL~~~~ 238 (319)
T PRK09479 161 VVVLDRPRH--EELIAEIREAGARVKLISDGDVAGAIATAFPDTGVDILMGIGGAPEGVLAAAALKCLGGEMQGRLLPRN 238 (319)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCeeEEEEcCcChHHHHHHHHHHhcCceeEEeECCCC
Confidence 346688887 589999999999999998545555555552 234421 16788888866
Q ss_pred HHHHHHHHhcCCC----------------EEEEEcCCcccHHHHH
Q 002310 777 KKRFINELQNDEN----------------VVAMVGDGINDAAALA 805 (937)
Q Consensus 777 K~~iV~~Lq~~G~----------------~VamvGDG~NDa~AL~ 805 (937)
..+.-+. ++.|. -|.|+.-|+-|...|+
T Consensus 239 ~~e~~r~-~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 239 EEERARA-KKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred HHHHHHH-HHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 5554333 33343 7889999999987776
No 305
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=24.25 E-value=2.5e+02 Score=26.95 Aligned_cols=70 Identities=11% Similarity=0.073 Sum_probs=50.3
Q ss_pred CEEEEEEEecCcCChhHHHHHHHHHhCCC-eE-EEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHH
Q 002310 713 NMLAGLIYVEDRIRDDAAHVVNSLSSQGI-GV-YMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINE 783 (937)
Q Consensus 713 ~~~lG~i~l~D~lr~~a~e~I~~L~~aGI-~v-~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~ 783 (937)
-.++|+-++...--+.+++.++.|+++|. ++ +|+-|-.+..-..--+++|++. .+..+.++++..+.+..
T Consensus 54 adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd~-~~~~gt~~~~i~~~l~~ 125 (132)
T TIGR00640 54 VHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVAE-IFGPGTPIPESAIFLLK 125 (132)
T ss_pred CCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCCE-EECCCCCHHHHHHHHHH
Confidence 34667777778888899999999999987 44 4554444444456688999972 45567788887776655
No 306
>PHA00370 III attachment protein
Probab=23.89 E-value=1e+02 Score=32.65 Aligned_cols=6 Identities=0% Similarity=-0.119 Sum_probs=2.4
Q ss_pred HHHHHh
Q 002310 143 SVKRIL 148 (937)
Q Consensus 143 ~ve~~L 148 (937)
++++++
T Consensus 150 kma~a~ 155 (297)
T PHA00370 150 KMANAN 155 (297)
T ss_pred HHhhhh
Confidence 344433
No 307
>cd03421 SirA_like_N SirA_like_N, a protein of unknown function with an N-terminal SirA-like domain. The SirA, YedF, YeeD protein family is present in bacteria as well as archaea. SirA (also known as UvrY, and YhhP) belongs to a family of a two-component response regulators that controls secondary metabolism and virulence. The other member of this two-component system is a sensor kinase called BarA which phosphorylates SirA. A variety of microorganisms have similar proteins, all of which contain a common CPxP sequence motif in the N-terminal region. YhhP is suggested to be important for normal cell division and growth in rich nutrient medium. Moreover, despite a low primary sequence similarity, the YccP structure closely resembles the non-homologous C-terminal RNA-binding domain of E. coli translation initiation factor IF3. The signature CPxP motif serves to stabilize the N-terminal helix as part of the N-capping box and might be important in mRNA-binding.
Probab=23.84 E-value=1.1e+02 Score=25.29 Aligned_cols=53 Identities=19% Similarity=0.277 Sum_probs=36.6
Q ss_pred EEecCCCChhHHHHHHHHhhcCCCceEEEeecCCCeeEeeecCCCcccchhhhhhHHHHHHHHHhcCccccc
Q 002310 130 LDVGGMTCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSKAKVIPNWQRQLGEALAKHLTSCGFKSSL 201 (937)
Q Consensus 130 l~V~Gm~C~~Ca~~ve~~L~~~~GV~~~~Vn~~~~~~~V~~d~~~~~~~~~~~~~~~~i~~~i~~~Gy~~~~ 201 (937)
+++.|+.|+.-.-...++| +.+.=. .+.|..|..... +.+....++.||+...
T Consensus 2 lD~rG~~CP~P~l~~k~al-~~~~g~---------~l~v~~d~~~s~---------~~i~~~~~~~G~~~~~ 54 (67)
T cd03421 2 IDARGLACPQPVIKTKKAL-ELEAGG---------EIEVLVDNEVAK---------ENVSRFAESRGYEVSV 54 (67)
T ss_pred cccCCCCCCHHHHHHHHHH-hcCCCC---------EEEEEEcChhHH---------HHHHHHHHHcCCEEEE
Confidence 5788999999999999999 443221 233433332222 6788999999999853
No 308
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=23.72 E-value=1.6e+02 Score=33.10 Aligned_cols=57 Identities=19% Similarity=0.264 Sum_probs=37.4
Q ss_pred HHHHHHhcCCCEEEEEcCC--------------------cccHHHHHhC--CeeEEeCC----ChHHHHh--hcCEEEeC
Q 002310 779 RFINELQNDENVVAMVGDG--------------------INDAAALASS--HIGVAMGG----GVGAASE--VASVVLMG 830 (937)
Q Consensus 779 ~iV~~Lq~~G~~VamvGDG--------------------~NDa~AL~~A--dVGIamg~----gt~~a~~--aADivL~~ 830 (937)
.+++.|+++|..|+.+.=| +.|-|.|-+- ++.|.++. +...+.+ .+|++|+|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 3556677778777777322 1477766544 67777762 4444443 58999999
Q ss_pred CChhH
Q 002310 831 NRLSQ 835 (937)
Q Consensus 831 ~~l~~ 835 (937)
|.|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 98864
No 309
>KOG0921 consensus Dosage compensation complex, subunit MLE [Transcription]
Probab=23.68 E-value=1.3e+02 Score=37.82 Aligned_cols=26 Identities=19% Similarity=0.025 Sum_probs=16.1
Q ss_pred cccchhhhccCcCCcccccccccccc
Q 002310 48 FASLSRRKFSAVLPPHIRCRLECMSS 73 (937)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (937)
+.--+++--.||-||.+.+==++.++
T Consensus 1152 l~~~StrygDGp~PPKmaryDnG~~~ 1177 (1282)
T KOG0921|consen 1152 LLTDSTRYGDGPGPPKMARYDNGPSN 1177 (1282)
T ss_pred cccccccccCCCCCcccccccCCCcc
Confidence 33446677788887877664444443
No 310
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=23.32 E-value=9.7e+02 Score=25.93 Aligned_cols=81 Identities=15% Similarity=0.265 Sum_probs=54.3
Q ss_pred ecCcCChhHHHHHHHHHhCCCe-EEEEcC-CCHHHHHHHHHHcCCCCceeEec----------cChhhHHHHHHHHhcCC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG-VYMLSG-DKKNSAEYVASLVGIPKDKVLSG----------VKPNEKKRFINELQNDE 788 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~-v~mlTG-D~~~tA~~iA~~~GI~~~~v~ar----------~~Pe~K~~iV~~Lq~~G 788 (937)
+=|-+=++..+..+.|++.|+. |.++|- -..+....+++...= -+|+- ..|++-.+.++.+|+..
T Consensus 121 ipDLP~ee~~~~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~g---FiY~vs~~GvTG~~~~~~~~l~~~i~~ik~~~ 197 (259)
T PF00290_consen 121 IPDLPPEESEELREAAKKHGLDLIPLVAPTTPEERIKKIAKQASG---FIYLVSRMGVTGSRTELPDELKEFIKRIKKHT 197 (259)
T ss_dssp ETTSBGGGHHHHHHHHHHTT-EEEEEEETTS-HHHHHHHHHH-SS---EEEEESSSSSSSTTSSCHHHHHHHHHHHHHTT
T ss_pred EcCCChHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCc---EEEeeccCCCCCCcccchHHHHHHHHHHHhhc
Confidence 5566667888888999999997 677776 445566677776542 23331 23566778899999888
Q ss_pred CEEEEEcCCcccHHHH
Q 002310 789 NVVAMVGDGINDAAAL 804 (937)
Q Consensus 789 ~~VamvGDG~NDa~AL 804 (937)
..=.++|=|+++..-.
T Consensus 198 ~~Pv~vGFGI~~~e~~ 213 (259)
T PF00290_consen 198 DLPVAVGFGISTPEQA 213 (259)
T ss_dssp SS-EEEESSS-SHHHH
T ss_pred CcceEEecCCCCHHHH
Confidence 7888999999887544
No 311
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.13 E-value=1.8e+02 Score=31.86 Aligned_cols=67 Identities=21% Similarity=0.239 Sum_probs=45.0
Q ss_pred ecCcCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSAE------YVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.++++++.++.++.|++.|++ ..++-||++.... ..|+++||.-..+. ...+.++=.+.|+.|.+.
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 86 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHD 86 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4467889999999999988876 4667799987664 46788999532211 123334555666666553
No 312
>COG4420 Predicted membrane protein [Function unknown]
Probab=22.92 E-value=3.5e+02 Score=27.61 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=17.4
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 002310 469 REAPVQRLADQVSGHFTYGVIALS-AATFVFWNL 501 (937)
Q Consensus 469 ~~~~l~~~~d~~~~~~~~~vl~la-~~~~i~~~~ 501 (937)
..+--.+.+|+++.++.-..+++. .+.+++|..
T Consensus 40 ~~t~gdR~ad~ia~f~Gsw~fil~~~~~ll~Wi~ 73 (191)
T COG4420 40 GETFGDRVADKIARFGGSWAFILTFTLLLLLWIV 73 (191)
T ss_pred ccchhhhHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 444555788888776544333333 333344544
No 313
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=22.89 E-value=1.9e+02 Score=25.37 Aligned_cols=48 Identities=29% Similarity=0.297 Sum_probs=38.4
Q ss_pred EEEEecC---cCChhHHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCCC
Q 002310 717 GLIYVED---RIRDDAAHVVNSLSSQGIGVYML-SGDKKNSAEYVASLVGIP 764 (937)
Q Consensus 717 G~i~l~D---~lr~~a~e~I~~L~~aGI~v~ml-TGD~~~tA~~iA~~~GI~ 764 (937)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4566777 77888999999999999998877 566666777888888875
No 314
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=22.88 E-value=3.7e+02 Score=26.34 Aligned_cols=76 Identities=22% Similarity=0.290 Sum_probs=50.5
Q ss_pred CcCChhHHHHHHHHHhCCCe-EEEEcCCC---HHHHHHHHHHcCCCCc-eeEeccC----hhhHHHHHHHHhc-CCCEEE
Q 002310 723 DRIRDDAAHVVNSLSSQGIG-VYMLSGDK---KNSAEYVASLVGIPKD-KVLSGVK----PNEKKRFINELQN-DENVVA 792 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~aGI~-v~mlTGD~---~~tA~~iA~~~GI~~~-~v~ar~~----Pe~K~~iV~~Lq~-~G~~Va 792 (937)
+.=|++++..-+.|++.|++ -.++|.+- .+||..+++..+++.. .+...+. +++-.+.++.+.+ .+..|+
T Consensus 25 ~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~~~~l~p~~~~~~~~~~l~~~~~~~~~~vl 104 (152)
T TIGR00249 25 TNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNLPSSAEVLEGLTPCGDIGLVSDYLEALTNEGVASVL 104 (152)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCCCcceEEccCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 33466788888889887764 35667765 5688889998887432 2233444 4555667777665 356899
Q ss_pred EEcCCc
Q 002310 793 MVGDGI 798 (937)
Q Consensus 793 mvGDG~ 798 (937)
+||-+-
T Consensus 105 iVgH~P 110 (152)
T TIGR00249 105 LVSHLP 110 (152)
T ss_pred EEeCCC
Confidence 998763
No 315
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=22.63 E-value=7.7e+02 Score=31.78 Aligned_cols=107 Identities=19% Similarity=0.218 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhcCCCceEE------------EEecCCCCCeEEEEeCCCccCCcEEEEcCCC
Q 002310 330 IMLIAFVLLGKNLEQRAKIKATSDMTGLLGILPSKAR------------LLVDNDAKDSIIEVPCNSLHVGDHIVVLPGD 397 (937)
Q Consensus 330 ~~il~~~llg~~le~~~~~k~~~~l~~l~~~~p~~~~------------v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge 397 (937)
+++++-..++.+.|.+++ |+.+.++++....+.-.+ +-.++=.-|....+..-|.+|-|.+.++ |+
T Consensus 96 ~iv~~~~~i~~~~e~~a~-ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~-g~ 173 (867)
T TIGR01524 96 LMVLASGLLGFIQESRAE-RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS-AR 173 (867)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEe-cC
Confidence 455566678888888886 778888888766554444 2112112367888999999999988887 44
Q ss_pred EEeeeEEEeeccee-eeecccc--CCCccc-----ccCCCCccccceee
Q 002310 398 RIPADGVVRAGRST-VDESSFT--GEPLPV-----TKIPESEVAAGSIN 438 (937)
Q Consensus 398 ~IPaDgvll~G~~~-VDeS~LT--GEs~pv-----~K~~g~~v~aGt~~ 438 (937)
-+-+|=-.+.|++. |+-..-+ .+..+. .-..|..+..|...
T Consensus 174 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~ 222 (867)
T TIGR01524 174 DLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQ 222 (867)
T ss_pred ceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEE
Confidence 45667767777652 2221110 011111 13578888887644
No 316
>TIGR03882 cyclo_dehyd_2 bacteriocin biosynthesis cyclodehydratase domain. This model describes a ThiF-like domain of a fusion protein found in clusters associated with the production of TOMMs (thiazole/oxazole-modified microcins), small bacteriocins with characteristic heterocycle modifications. This domain is presumed to act as a cyclodehydratase, as do members of the SagC family modeled by TIGR03603.
Probab=22.51 E-value=4.5e+02 Score=26.99 Aligned_cols=99 Identities=19% Similarity=0.165 Sum_probs=54.3
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEEcCCc---cc-H
Q 002310 726 RDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMVGDGI---ND-A 801 (937)
Q Consensus 726 r~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~VamvGDG~---ND-a 801 (937)
.+++.++++.|.++|+=+---....... ...-..+| .++....+.+|+. +|.+.|.|. +| +
T Consensus 58 ~~~v~~~L~~L~~~G~l~~~~~~~~~~~-~~f~~~~g------------~~~~~a~~~l~~~--~V~V~~~G~~~~~~l~ 122 (193)
T TIGR03882 58 AEEVLYALDRLERRGYLVEDAPELPPAA-AAFWSGLG------------VDPAAALERLRQL--TVTVLSFGEGGAAALA 122 (193)
T ss_pred HHHHHHHHHHHHHCCCEeccCCCCCHHH-HHHHHHcC------------CCHHHHHHHHhcC--cEEEEecCCCcHHHHH
Confidence 6679999999999996543211112222 22222233 3455566677765 455555553 32 2
Q ss_pred HHHHhCCeeEEeCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHH
Q 002310 802 AALASSHIGVAMGGGVGAASEVASVVLMGNRLSQLLVALELSRLTM 847 (937)
Q Consensus 802 ~AL~~AdVGIamg~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~ 847 (937)
.+|+.+.|++.- ....-++|+.+|.+. +++-.+.|+..
T Consensus 123 ~aLaa~Gv~~~~------~~a~l~vVl~~Dyl~--p~L~~~n~~~l 160 (193)
T TIGR03882 123 AALAAAGIRIAP------SEADLTVVLTDDYLD--PELAAINQRAL 160 (193)
T ss_pred HHHHHcCCCccC------CCCCEEEEEeCCCCC--hHHHHHHHHHH
Confidence 357777777754 112357788887763 34444444433
No 317
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=22.35 E-value=1.1e+02 Score=34.03 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=33.6
Q ss_pred CcCChhHHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHH
Q 002310 723 DRIRDDAAHVVNSLSSQ---GIGVYMLSGDKKNSAEYVASL 760 (937)
Q Consensus 723 D~lr~~a~e~I~~L~~a---GI~v~mlTGD~~~tA~~iA~~ 760 (937)
..+-||..++++.+++. |+.|..++-|++.+|++++.-
T Consensus 177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 45678899999999988 999999999999999998875
No 318
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=22.33 E-value=2.8e+02 Score=32.37 Aligned_cols=70 Identities=17% Similarity=0.192 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeEecc--ChhhH---HHHHHHHhcCCCEE-EEEcCCc
Q 002310 727 DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVLSGV--KPNEK---KRFINELQNDENVV-AMVGDGI 798 (937)
Q Consensus 727 ~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~ar~--~Pe~K---~~iV~~Lq~~G~~V-amvGDG~ 798 (937)
+...+.=+.|++.|+...+..||....-..++++.++. .|++.. .|.++ .++.+.|++.|-.+ .+-++.+
T Consensus 61 esL~~L~~~L~~~g~~L~v~~G~~~~vl~~L~~~~~~~--~V~~~~~~~~~~~~rd~~v~~~l~~~~i~~~~~~~~~l 136 (429)
T TIGR02765 61 ESLKDLRTSLRKLGSDLLVRSGKPEDVLPELIKELGVR--TVFLHQEVGSEEKSVERLLQQALARLGIHVEQHWGSTL 136 (429)
T ss_pred HHHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHHhCCC--EEEEeccCCHHHHHHHHHHHHHHHhcCceEEEecCCEe
Confidence 44455566788899999999999999999999999997 777764 44444 23444566665433 3344444
No 319
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=22.23 E-value=2.1e+02 Score=30.45 Aligned_cols=39 Identities=23% Similarity=0.265 Sum_probs=33.9
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 002310 726 RDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPK 765 (937)
Q Consensus 726 r~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~ 765 (937)
++..+++|++|+++||+|-+.= |........|+++|-+.
T Consensus 112 ~~~l~~~i~~L~~~gIrVSLFi-dP~~~qi~~A~~~GAd~ 150 (239)
T PRK05265 112 FDKLKPAIARLKDAGIRVSLFI-DPDPEQIEAAAEVGADR 150 (239)
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCE
Confidence 3567889999999999988876 88888899999999864
No 320
>KOG3915 consensus Transcription regulator dachshund, contains SKI/SNO domain [Transcription]
Probab=22.20 E-value=1e+02 Score=35.37 Aligned_cols=7 Identities=14% Similarity=0.022 Sum_probs=2.6
Q ss_pred chhhhcc
Q 002310 51 LSRRKFS 57 (937)
Q Consensus 51 ~~~~~~~ 57 (937)
++--|..
T Consensus 34 ~~~~a~~ 40 (641)
T KOG3915|consen 34 IGPPASS 40 (641)
T ss_pred CCCcccc
Confidence 3333333
No 321
>PRK00035 hemH ferrochelatase; Reviewed
Probab=22.08 E-value=2.1e+02 Score=32.06 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=25.8
Q ss_pred CChhHHHHHHHHHhCCCe-EE----EEcCCCHHHHHHH
Q 002310 725 IRDDAAHVVNSLSSQGIG-VY----MLSGDKKNSAEYV 757 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~-v~----mlTGD~~~tA~~i 757 (937)
+.|++.+++++|.+.|++ |. +.+.|+.+|-..+
T Consensus 246 l~P~~~~~l~~l~~~g~k~V~v~P~~Fv~D~lEtl~ei 283 (333)
T PRK00035 246 LEPYTDDTLEELAEKGVKKVVVVPPGFVSDHLETLEEI 283 (333)
T ss_pred CCCCHHHHHHHHHHcCCCeEEEECCeeeccchhHHHHH
Confidence 789999999999999975 43 3567998865443
No 322
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.02 E-value=1.6e+02 Score=32.36 Aligned_cols=67 Identities=22% Similarity=0.317 Sum_probs=45.0
Q ss_pred ecCcCChhHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQGIG---VYMLSGDKKNSAE------YVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~aGI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.+.++++.++-++.|++.|++ ..++-||++.... ..|+++||.-..+. ...+.++=.+.|+.|.+.
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d 88 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNND 88 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567889999999999988876 4566799988664 46778898532211 123334555666666554
No 323
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=21.96 E-value=1.7e+02 Score=33.12 Aligned_cols=68 Identities=31% Similarity=0.446 Sum_probs=46.5
Q ss_pred EecCcCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 720 YVEDRIRDDAAHVVNSLSSQ-GIG---VYMLSGDKKNSAE------YVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 720 ~l~D~lr~~a~e~I~~L~~a-GI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
.+.+.+|++.++-++.|++. |++ .+++-||++.... ..|+++||.-..+. ...+.++=.+.|+.|.+.
T Consensus 80 ~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D 159 (364)
T PLN02616 80 AVAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNND 159 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCC
Confidence 46778899999999999877 765 5567799887654 46788999632222 233444556677777554
No 324
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=21.92 E-value=1.9e+02 Score=31.09 Aligned_cols=42 Identities=12% Similarity=0.042 Sum_probs=27.1
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhcccCcchhhhhHHHHH
Q 002310 292 GAPNMNTLVGLGAVSSFTVSSLAALVPKLGWKAFFEEPIMLI 333 (937)
Q Consensus 292 ~~~~md~Li~l~~~~a~~~s~~~~~~~~~~~~~~f~~~~~il 333 (937)
+..=||++++.+...+|+.+....-++-.....|-|+..+.+
T Consensus 162 kqW~Mst~lS~al~VaF~~a~~l~~T~~a~l~~Y~DPmvlaL 203 (314)
T COG3965 162 KQWLMSTCLSAALFVAFAAAWLLAGTKFAHLVVYADPMVLAL 203 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCchhhhhcccCHHHHHH
Confidence 445699999999999998876444333222256776644433
No 325
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=21.86 E-value=4.6e+02 Score=24.20 Aligned_cols=65 Identities=23% Similarity=0.319 Sum_probs=45.0
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
++.+.|.-|++..+.++.|.+.|+++. -|+ .|+..+. +.|+....|. ......++..+++.+++.
T Consensus 4 lisv~~~dk~~~~~~a~~l~~~G~~i~-aT~---gTa~~L~-~~gi~~~~v~~~~~~~~~~~~~i~~~i~~~ 70 (116)
T cd01423 4 LISIGSYSKPELLPTAQKLSKLGYKLY-ATE---GTADFLL-ENGIPVTPVAWPSEEPQNDKPSLRELLAEG 70 (116)
T ss_pred EEecCcccchhHHHHHHHHHHCCCEEE-Ecc---HHHHHHH-HcCCCceEeeeccCCCCCCchhHHHHHHcC
Confidence 355677788999999999999999985 554 6777777 7788543332 111123446788888763
No 326
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.83 E-value=1.9e+02 Score=31.96 Aligned_cols=67 Identities=21% Similarity=0.263 Sum_probs=48.0
Q ss_pred ecCcCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQ-GIG---VYMLSGDKKNSA------EYVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~a-GI~---v~mlTGD~~~tA------~~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.++++++.++-|+.|++. |++ +.++-||++... ...|+++||.-..+. ...+.++=.+.|+.|.+.
T Consensus 11 iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D 89 (297)
T PRK14168 11 IREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNND 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567889999999999877 775 566779998765 456788999632221 346677777788887665
No 327
>PTZ00146 fibrillarin; Provisional
Probab=21.76 E-value=99 Score=34.04 Aligned_cols=7 Identities=14% Similarity=0.183 Sum_probs=3.2
Q ss_pred eeEEEee
Q 002310 401 ADGVVRA 407 (937)
Q Consensus 401 aDgvll~ 407 (937)
+|.++.+
T Consensus 203 vDvV~~D 209 (293)
T PTZ00146 203 VDVIFAD 209 (293)
T ss_pred CCEEEEe
Confidence 4555443
No 328
>KOG1635 consensus Peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover, chaperones]
Probab=21.70 E-value=1.4e+02 Score=29.97 Aligned_cols=40 Identities=20% Similarity=0.160 Sum_probs=33.2
Q ss_pred hhHHHHHHHHhhcCCCceEEEeecCCC-------------------eeEeeecCCCccc
Q 002310 138 GGCAASVKRILESQPQVSSASVNLTTE-------------------TAIVWPVSKAKVI 177 (937)
Q Consensus 138 ~~Ca~~ve~~L~~~~GV~~~~Vn~~~~-------------------~~~V~~d~~~~~~ 177 (937)
.+|-|.+|.+..+++||...+|-++.+ .+.|.|||..++-
T Consensus 31 ~GCFWg~E~a~~~l~gV~~T~vGYagG~~~nPtYk~vc~~tT~HaEvvrV~ydpk~~sy 89 (191)
T KOG1635|consen 31 AGCFWGVELAYQRLPGVVRTEVGYAGGITDNPTYKDVCSGTTNHAEVVRVQYDPKVISY 89 (191)
T ss_pred ccchhhHHHHHhhcCCeEEEeecccCCccCCcchhhhccCCCCcceEEEEEeCcccccH
Confidence 478999999999999999999877543 4678899988775
No 329
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=21.33 E-value=1.8e+02 Score=24.63 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=31.8
Q ss_pred EEEecCcCChhHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCC
Q 002310 718 LIYVEDRIRDDAAHVVNSLSSQGIGVYMLS-GDKKNSAEYVASLVGIP 764 (937)
Q Consensus 718 ~i~l~D~lr~~a~e~I~~L~~aGI~v~mlT-GD~~~tA~~iA~~~GI~ 764 (937)
++.+.+..++.+.+..+.|+++|++|.+.. +.+..-....|+..|++
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 344566677888888999999999887643 33445555556666653
No 330
>COG1585 Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=21.29 E-value=3.8e+02 Score=26.09 Aligned_cols=19 Identities=26% Similarity=0.281 Sum_probs=12.4
Q ss_pred eEEEEeCCCccCCcEEEEc
Q 002310 376 SIIEVPCNSLHVGDHIVVL 394 (937)
Q Consensus 376 ~~~~v~~~~L~~GDiV~v~ 394 (937)
.|.-..-+++.+||.|.|-
T Consensus 110 ~Wra~~~~~l~~G~~V~Vv 128 (140)
T COG1585 110 SWRARSDEDLPAGDRVEVV 128 (140)
T ss_pred EeEEecCCCCCCCCEEEEE
Confidence 3444444778888888764
No 331
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=21.16 E-value=3.9e+02 Score=27.48 Aligned_cols=64 Identities=16% Similarity=0.289 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHhCCCeEEEEcCCCH-----HHHHHHHHHcCCCCceeEeccChhhHHHHHHHHhcCCCEEEEE
Q 002310 727 DDAAHVVNSLSSQGIGVYMLSGDKK-----NSAEYVASLVGIPKDKVLSGVKPNEKKRFINELQNDENVVAMV 794 (937)
Q Consensus 727 ~~a~e~I~~L~~aGI~v~mlTGD~~-----~tA~~iA~~~GI~~~~v~ar~~Pe~K~~iV~~Lq~~G~~Vamv 794 (937)
++..+.++++++.|++ .+++||+. .--+++|+++||..-.-..+. +-.++++.+-..|..+..|
T Consensus 75 ~~l~~~l~~~~~~g~~-~vv~G~i~sd~~~~~~e~~~~~~gl~~~~PLW~~---~~~~ll~e~~~~g~~~~iv 143 (194)
T cd01994 75 EDLKELLRKLKEEGVD-AVVFGAILSEYQRTRVERVCERLGLEPLAPLWGR---DQEELLREMIEAGFKAIII 143 (194)
T ss_pred HHHHHHHHHHHHcCCC-EEEECccccHHHHHHHHHHHHHcCCEEEecccCC---CHHHHHHHHHHcCCeEEEE
Confidence 5667778887777777 67899995 455689999999522222333 3345888888888764443
No 332
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=21.13 E-value=2.3e+02 Score=31.21 Aligned_cols=83 Identities=18% Similarity=0.265 Sum_probs=54.5
Q ss_pred EecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCC---------------------ceeEeccChhhH
Q 002310 720 YVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASL-VGIPK---------------------DKVLSGVKPNEK 777 (937)
Q Consensus 720 ~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~-~GI~~---------------------~~v~ar~~Pe~K 777 (937)
.+-|.+|. .+.|+++|+.|.+|.+++--....+.+.+.. .|++- -++.+|+-|++.
T Consensus 159 ~vLdRpRH--~~lI~eiR~~Gari~Li~DGDV~~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~~qgrL~~~~~ 236 (309)
T cd01516 159 VVLDRPRH--AALIEEIREAGARIKLIPDGDVAAAIATALPGSGVDVLMGIGGAPEGVLAAAALKCLGGEMQGRLLPRNE 236 (309)
T ss_pred EEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhCCCCCeeEEEECCCChHHHHHHHHHHhCCceeEEEECCCCH
Confidence 45677777 5899999999999999984444444444422 33321 157788877665
Q ss_pred HHHHHHHhcC----------------CCEEEEEcCCcccHHHHH
Q 002310 778 KRFINELQND----------------ENVVAMVGDGINDAAALA 805 (937)
Q Consensus 778 ~~iV~~Lq~~----------------G~~VamvGDG~NDa~AL~ 805 (937)
.+.-+. ++. |..|.|+.-|+-|...|+
T Consensus 237 ~e~~r~-~~~Gi~D~~ki~~~ddLv~gd~v~FaATGvTdG~lL~ 279 (309)
T cd01516 237 EERARA-REMGITDPNKILTLDDLVRGDDVVFAATGITDGELLK 279 (309)
T ss_pred HHHHHH-HHcCCCChhheeEHHHcccCCCEEEEEeCCCCCCccC
Confidence 444332 222 446888888888887775
No 333
>COG4025 Predicted membrane protein [Function unknown]
Probab=21.09 E-value=3.6e+02 Score=28.51 Aligned_cols=12 Identities=25% Similarity=0.066 Sum_probs=4.8
Q ss_pred HHHHHHHHHHHH
Q 002310 303 GAVSSFTVSSLA 314 (937)
Q Consensus 303 ~~~~a~~~s~~~ 314 (937)
-++.+++-+++.
T Consensus 167 v~~la~l~~vl~ 178 (284)
T COG4025 167 VTFLAFLGYVLA 178 (284)
T ss_pred hhhhhhhhHHHH
Confidence 333444434333
No 334
>PLN02423 phosphomannomutase
Probab=21.09 E-value=1.8e+02 Score=31.06 Aligned_cols=47 Identities=13% Similarity=0.198 Sum_probs=36.4
Q ss_pred eEEEEEECCEEEEEEEecCcCChhHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAE 755 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~ 755 (937)
.++++..||+|+ -=..++.+...++|++|++. +++++.||.......
T Consensus 8 ~i~~~D~DGTLl---~~~~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~ 54 (245)
T PLN02423 8 VIALFDVDGTLT---APRKEATPEMLEFMKELRKV-VTVGVVGGSDLSKIS 54 (245)
T ss_pred eEEEEeccCCCc---CCCCcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHH
Confidence 345577888876 22346889999999999977 999999999766553
No 335
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.91 E-value=1.6e+02 Score=32.44 Aligned_cols=67 Identities=15% Similarity=0.250 Sum_probs=45.8
Q ss_pred ecCcCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQ-GIG---VYMLSGDKKNSAE------YVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~a-GI~---v~mlTGD~~~tA~------~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+.++++++.++-++.|++. |++ +.++.||++.... ..|+++||.-..+. ...+.++=.+.|+.|.+.
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 87 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNND 87 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567889999999999877 766 5678899987654 46788999532221 223445556667776554
No 336
>PRK15108 biotin synthase; Provisional
Probab=20.84 E-value=6.4e+02 Score=28.46 Aligned_cols=122 Identities=16% Similarity=0.199 Sum_probs=73.0
Q ss_pred cCc-CC--hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCc------------eeEeccChhhHHHHHHHHhc
Q 002310 722 EDR-IR--DDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGIPKD------------KVLSGVKPNEKKRFINELQN 786 (937)
Q Consensus 722 ~D~-lr--~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI~~~------------~v~ar~~Pe~K~~iV~~Lq~ 786 (937)
+++ .+ +...+.++.+|+.|+.+.+--|.-......--++.|++.- .++..-+.+++.+.++.+++
T Consensus 103 ~~p~~~~~e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~~leT~p~~f~~I~~~~~~~~rl~~i~~a~~ 182 (345)
T PRK15108 103 KNPHERDMPYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRD 182 (345)
T ss_pred CCCCcchHHHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEeeccccChHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 354 44 6788899999988988765446554444455557788621 34444567899999999999
Q ss_pred CCCEEE---EEcCCccc------HHHHHhC--Ce-eEEeC-----CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHH
Q 002310 787 DENVVA---MVGDGIND------AAALASS--HI-GVAMG-----GGVGAASEVASVVLMGNRLSQLLVALELSRLTMKT 849 (937)
Q Consensus 787 ~G~~Va---mvGDG~ND------a~AL~~A--dV-GIamg-----~gt~~a~~aADivL~~~~l~~l~~~i~~~R~~~~~ 849 (937)
.|..|. ++|=|-.+ .-.|+.- ++ .|.+. .|+...... .-+.....+.+...|.++.+
T Consensus 183 ~G~~v~sg~i~GlgEt~ed~v~~~~~l~~l~~~~~~ip~~~~~P~~gTpl~~~~------~~~~~e~lr~iAi~Rl~lp~ 256 (345)
T PRK15108 183 AGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADND------DVDAFDFIRTIAVARIMMPT 256 (345)
T ss_pred cCCceeeEEEEeCCCCHHHHHHHHHHHHhccCCCCEEEeCCccCCCCCCCCCCC------CCCHHHHHHHHHHHHHHCCC
Confidence 887554 67766433 3344433 11 34432 355432110 01345566777777777655
No 337
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.72 E-value=2.2e+02 Score=31.36 Aligned_cols=67 Identities=22% Similarity=0.339 Sum_probs=46.1
Q ss_pred ecCcCChhHHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCCceeE--eccChhhHHHHHHHHhcC
Q 002310 721 VEDRIRDDAAHVVNSLSSQ-GIG---VYMLSGDKKNSA------EYVASLVGIPKDKVL--SGVKPNEKKRFINELQND 787 (937)
Q Consensus 721 l~D~lr~~a~e~I~~L~~a-GI~---v~mlTGD~~~tA------~~iA~~~GI~~~~v~--ar~~Pe~K~~iV~~Lq~~ 787 (937)
+..++|++.++.++.|++. |++ ..++.||++... ...|+++||....+. ...+.++=.+.|+.|.+.
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d 87 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNAR 87 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4457888999999999877 776 466789998865 446788899633222 234455566777777654
No 338
>PRK13670 hypothetical protein; Provisional
Probab=20.62 E-value=6.5e+02 Score=28.99 Aligned_cols=93 Identities=13% Similarity=0.093 Sum_probs=69.3
Q ss_pred EEEEEEEecCcCChhHHHHHHHHHh---CCCeEEEEcCC----------CHHHHHHHHHHcCCCCc----eeEeccChhh
Q 002310 714 MLAGLIYVEDRIRDDAAHVVNSLSS---QGIGVYMLSGD----------KKNSAEYVASLVGIPKD----KVLSGVKPNE 776 (937)
Q Consensus 714 ~~lG~i~l~D~lr~~a~e~I~~L~~---aGI~v~mlTGD----------~~~tA~~iA~~~GI~~~----~v~ar~~Pe~ 776 (937)
+.+|+|+=-|++-.|=...|++.++ +|..+++++|+ +...-..+|.++|++-- -.|+..+|++
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~vielpf~~a~~sae~ 81 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDLVVELPFLYSVQSADF 81 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCEEEEeCCchHhCCHHH
Confidence 4679999999999998888877765 47777777887 45566789999998521 1278899998
Q ss_pred HHH-HHHHHhcCCCEEEEEcCCcccHHHHHh
Q 002310 777 KKR-FINELQNDENVVAMVGDGINDAAALAS 806 (937)
Q Consensus 777 K~~-iV~~Lq~~G~~VamvGDG~NDa~AL~~ 806 (937)
=.+ -|+.|++.|-....+|.-..|...|+.
T Consensus 82 F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 82 FAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred HHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 775 355666667777889888777766654
No 339
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=20.37 E-value=2.6e+02 Score=29.97 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=56.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCC----------HHHHHHHHHHcCCCCcee---EeccChhhHHHHHHHHhcCCCEE
Q 002310 725 IRDDAAHVVNSLSSQGIGVYMLSGDK----------KNSAEYVASLVGIPKDKV---LSGVKPNEKKRFINELQNDENVV 791 (937)
Q Consensus 725 lr~~a~e~I~~L~~aGI~v~mlTGD~----------~~tA~~iA~~~GI~~~~v---~ar~~Pe~K~~iV~~Lq~~G~~V 791 (937)
+++-.++-|+.+++.||.|. +|.. ...-...++++|++.-.| +-.+++++|.++|+..++.|-+|
T Consensus 52 ~~~~l~eki~l~~~~gV~v~--~GGtl~E~a~~q~~~~~yl~~~k~lGf~~IEiSdGti~l~~~~r~~~I~~~~~~Gf~v 129 (244)
T PF02679_consen 52 PEEILKEKIDLAHSHGVYVY--PGGTLFEVAYQQGKFDEYLEECKELGFDAIEISDGTIDLPEEERLRLIRKAKEEGFKV 129 (244)
T ss_dssp TCHHHHHHHHHHHCTT-EEE--E-HHHHHHHHHTT-HHHHHHHHHHCT-SEEEE--SSS---HHHHHHHHHHHCCTTSEE
T ss_pred CHHHHHHHHHHHHHcCCeEe--CCcHHHHHHHhcChHHHHHHHHHHcCCCEEEecCCceeCCHHHHHHHHHHHHHCCCEE
Confidence 44557888899998888754 5544 334456778888753222 33578999999999999999776
Q ss_pred EE-EcCCcccHHHHHhCCeeEEeCCChHHHHhhcCEEEeCCC
Q 002310 792 AM-VGDGINDAAALASSHIGVAMGGGVGAASEVASVVLMGNR 832 (937)
Q Consensus 792 am-vGDG~NDa~AL~~AdVGIamg~gt~~a~~aADivL~~~~ 832 (937)
.. || --|...-..-|+.=-+......-..-||.|+.+.+
T Consensus 130 ~~EvG--~K~~~~~~~~~~~~~i~~~~~dLeAGA~~ViiEar 169 (244)
T PF02679_consen 130 LSEVG--KKDPESDFSLDPEELIEQAKRDLEAGADKVIIEAR 169 (244)
T ss_dssp EEEES---SSHHHHTT--CCHHHHHHHHHHHHTECEEEE--T
T ss_pred eeccc--CCCchhcccCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 65 87 33333322222211111112222235788877654
No 340
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.34 E-value=4.2e+02 Score=28.50 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=66.7
Q ss_pred cCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC-CCc-eeEeccC--------hhhHHHHHHHHh--------
Q 002310 724 RIRDDAAHVVNSLSSQGIGVYMLSGDKKNSAEYVASLVGI-PKD-KVLSGVK--------PNEKKRFINELQ-------- 785 (937)
Q Consensus 724 ~lr~~a~e~I~~L~~aGI~v~mlTGD~~~tA~~iA~~~GI-~~~-~v~ar~~--------Pe~K~~iV~~Lq-------- 785 (937)
.+|+++.+..+.|++.+|.+.+.|.-=-...+.+-++... .+. .+.+... -.=|..++..+.
T Consensus 138 ~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~ 217 (298)
T KOG3128|consen 138 ALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQN 217 (298)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHh
Confidence 4789999999999999999999995555555555554442 211 1111110 001122222221
Q ss_pred --------cCCCEEEEEcCCcccHHHHHhC-------CeeEEeCCChH---HHHhhcCEEEeCCChhHHHHH
Q 002310 786 --------NDENVVAMVGDGINDAAALASS-------HIGVAMGGGVG---AASEVASVVLMGNRLSQLLVA 839 (937)
Q Consensus 786 --------~~G~~VamvGDG~NDa~AL~~A-------dVGIamg~gt~---~a~~aADivL~~~~l~~l~~~ 839 (937)
+.+..|-..||.+-|.-|---+ .+|.....+.+ --++.-||||++|..-.++.-
T Consensus 218 ~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~~D~tldv~~s 289 (298)
T KOG3128|consen 218 ESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLVHDETLDVANS 289 (298)
T ss_pred hhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccchHHHHHHHHHhhcceEEecCcccchhHH
Confidence 1245789999999998654322 23333322222 234578999999977665543
No 341
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=20.20 E-value=4.9e+02 Score=33.65 Aligned_cols=148 Identities=13% Similarity=0.073 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhcCCCc------------eEEEEecCCCCCeEEEEeCCCccCCcEEEEcCCCEEeee
Q 002310 335 FVLLGKNLEQRAKIKATSDMTGLLGILPS------------KARLLVDNDAKDSIIEVPCNSLHVGDHIVVLPGDRIPAD 402 (937)
Q Consensus 335 ~~llg~~le~~~~~k~~~~l~~l~~~~p~------------~~~v~~~~~~~g~~~~v~~~~L~~GDiV~v~~Ge~IPaD 402 (937)
-.+++.+.| +...++.+.++++...... ...+-.++=.-|....+..-|.+|-|.+.++. +-+-+|
T Consensus 124 ~~~i~~~qe-~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g-~~l~VD 201 (903)
T PRK15122 124 SGLLRFWQE-FRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIES-RDLFIS 201 (903)
T ss_pred HHHHHHHHH-HHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-CceEEE
Confidence 334444444 4455667778777654321 12221121123578889999999999888874 345567
Q ss_pred EEEeeccee-eeeccc------------cCCCccc-----ccCCCCccccceeeecceEEEE----------EEecCCcc
Q 002310 403 GVVRAGRST-VDESSF------------TGEPLPV-----TKIPESEVAAGSINLNGTLTVE----------VRRPGGET 454 (937)
Q Consensus 403 gvll~G~~~-VDeS~L------------TGEs~pv-----~K~~g~~v~aGt~~~~G~~~~~----------V~~~G~~T 454 (937)
=-.+.|++. |+-... .++..+. .-..|..|..|+...-=...+. +...-..|
T Consensus 202 ES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~~~~~t 281 (903)
T PRK15122 202 QAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVGTRAQT 281 (903)
T ss_pred ccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcCCCCCC
Confidence 666666652 322211 1222111 2456888887764432111111 11111223
Q ss_pred HHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHH
Q 002310 455 AMGDIVRLVEEAQSREAPVQRLADQVSGHFTYGVIALSAA 494 (937)
Q Consensus 455 ~~~~i~~~v~~a~~~~~~l~~~~d~~~~~~~~~vl~la~~ 494 (937)
.+.+-+ .++.+.+.+++.++++++++++.+
T Consensus 282 ~l~~~l----------~~i~~~l~~~~~~~~~~v~~~~~~ 311 (903)
T PRK15122 282 AFDRGV----------NSVSWLLIRFMLVMVPVVLLINGF 311 (903)
T ss_pred cHHHHH----------HHHHHHHHHHHHHHHHHhhhhhhh
Confidence 222211 245677788888888777766543
No 342
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=20.16 E-value=4.5e+02 Score=28.06 Aligned_cols=82 Identities=16% Similarity=0.137 Sum_probs=53.9
Q ss_pred HHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCCCceeEec-cChhhHHHHHHHHhcCCCEEEEE-------cC
Q 002310 729 AAHVVNSLSSQGIGVYMLSGDKKN----SAEYVASLVGIPKDKVLSG-VKPNEKKRFINELQNDENVVAMV-------GD 796 (937)
Q Consensus 729 a~e~I~~L~~aGI~v~mlTGD~~~----tA~~iA~~~GI~~~~v~ar-~~Pe~K~~iV~~Lq~~G~~Vamv-------GD 796 (937)
.++.++..++.|+.+.+=.+.... .....+.++|-.. ..++- ++++ .++.+++.|-.+..+ |.
T Consensus 127 l~~~~~~A~~~g~~v~~H~~e~~~~~g~~~i~~~~~~~~~~-i~H~~~l~~~----~~~~la~~g~~v~~~P~sn~~l~~ 201 (263)
T cd01305 127 LEDILELLRRRGKLFAIHASETRESVGMTDIERALDLEPDL-LVHGTHLTDE----DLELVRENGVPVVLCPRSNLYFGV 201 (263)
T ss_pred HHHHHHHHHHCCCeeEEecCCCCCCCCchhHHHHHhCCCCE-EEEcCCCCHH----HHHHHHHcCCcEEEChhhHHHhCC
Confidence 788889999999876665443322 1122222334332 23333 3443 377888888777665 89
Q ss_pred CcccHHHHHhCCeeEEeCC
Q 002310 797 GINDAAALASSHIGVAMGG 815 (937)
Q Consensus 797 G~NDa~AL~~AdVGIamg~ 815 (937)
|....+.+.+++|-|++|+
T Consensus 202 g~~p~~~l~~~Gv~v~lGt 220 (263)
T cd01305 202 GIPPVAELLKLGIKVLLGT 220 (263)
T ss_pred CCCCHHHHHHCCCcEEEEC
Confidence 9999999999999999973
No 343
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=20.09 E-value=2.3e+02 Score=28.54 Aligned_cols=60 Identities=20% Similarity=0.250 Sum_probs=40.8
Q ss_pred eEEEEEECCEEEEEEEecCcCChh-------------------------HHHHHHHHHhCCCeEEEEcCCC--HHHHHHH
Q 002310 705 SLVYVGVDNMLAGLIYVEDRIRDD-------------------------AAHVVNSLSSQGIGVYMLSGDK--KNSAEYV 757 (937)
Q Consensus 705 ~~~~v~~~~~~lG~i~l~D~lr~~-------------------------a~e~I~~L~~aGI~v~mlTGD~--~~tA~~i 757 (937)
+...+..|++++|+|.++-.+-+. .+-+++++++.||+-+|+|=|. ....+-|
T Consensus 70 ~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI 149 (174)
T COG3981 70 TYWAVDEDGQIVGFINLRHQLNDFLLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVI 149 (174)
T ss_pred eEEEEecCCcEEEEEEeeeecchHHHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHH
Confidence 344455578999999887655332 2557889999999988988554 4454556
Q ss_pred HHHcCCC
Q 002310 758 ASLVGIP 764 (937)
Q Consensus 758 A~~~GI~ 764 (937)
-+.-|+.
T Consensus 150 ~~NGGil 156 (174)
T COG3981 150 EANGGIL 156 (174)
T ss_pred HhcCCEE
Confidence 5555554
Done!