BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002311
(937 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2E1Q|A Chain A, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|B Chain B, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|C Chain C, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
pdb|2E1Q|D Chain D, Crystal Structure Of Human Xanthine Oxidoreductase Mutant,
Glu803val
Length = 1333
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 289/820 (35%), Positives = 441/820 (53%), Gaps = 57/820 (6%)
Query: 107 EDLGDRLCGYSNSVLLKDSLMQQNHEQFDKSKVLTLLSSAEQVVRLSREYFPVGEPIPKS 166
E+L D+ CG + +L+ Q D + ++V + E VG P+P
Sbjct: 530 ENLEDK-CGKLDPTFASATLLFQKDPPAD-------VQLFQEVPKGQSEEDMVGRPLPHL 581
Query: 167 GAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVSAFLSYKDI 225
A +QASGEA++ DDIP N L V ST+ +I+S++ ++K +PG F+S D+
Sbjct: 582 AADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDV 641
Query: 226 PEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEP 285
P G NI E +FA + C G I VVADT + RAA + Y+ P
Sbjct: 642 P--GSNITGICN--DETVFAKDKVTCVGHIIGAVVADTPEHTQRAAQGVKITYEE---LP 694
Query: 286 PILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYYFYMETQTA 345
I+++E+A+ +SF+ P K GD+ KG +EAD+ ++S E+ +G Q +FY+ET
Sbjct: 695 AIITIEDAIKNNSFYG-PELKIEK--GDLKKGFSEADN-VVSGEIYIGGQEHFYLETHCT 750
Query: 346 LAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKAIKAMPVA 404
+AVP E + ++ S Q + +A+ LG+P + + V +R+GGGFGGK ++ V+
Sbjct: 751 IAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANRIVVRVKRMGGGFGGKVTRSTVVS 810
Query: 405 TACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQ 464
TA ALAAYK RPVR ++R DM++ GGRHP Y VGF G + AL+++ + G
Sbjct: 811 TAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGN 870
Query: 465 YPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEH 523
D+S +I + + Y + ++C+TNLPS TA R G QG IAE +
Sbjct: 871 TQDLSQSIMERALFHMDNCYKIPNIRGTGRLCKTNLPSNTAFRGFGGPQGMLIAECWMSE 930
Query: 524 VASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSFNQRTEVIK 583
VA T M + VR NL+ L F + +LE +T+P W+ SS ++ R +
Sbjct: 931 VAVTCGMPAEEVRRKNLYKEGDLTHFNQ----KLEGFTLPRCWEECLASSQYHARKSEVD 986
Query: 584 EFNRSNLWRKKGISRVP----IVYDVPLMSTPGKV-SILSDGSVVVEVGGIELGQGLWTK 638
+FN+ N W+K+G+ +P I + VP ++ G + + +DGSV++ GG E+GQGL TK
Sbjct: 987 KFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTK 1046
Query: 639 VKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKIL 698
+ Q+A+ AL + + + T +V TA S ++ + QAV C+ +
Sbjct: 1047 MVQVASRALKIPT--------SKIYISETSTNTVPNTSPTAASVSADLNGQAVYAACQTI 1098
Query: 699 VERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF---------TSMKYL 748
++RL P +++ S WE + AY+ +VSLSA+ Y P+ Y
Sbjct: 1099 LKRLEPYKKK----NPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHYF 1154
Query: 749 NYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPT 808
+YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G F LEE
Sbjct: 1155 SYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHY 1214
Query: 809 NSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCA 868
+ +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL LA S+ A
Sbjct: 1215 SPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASIFFA 1274
Query: 869 TRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
+ AIR AR F L+ PAT + ++ C
Sbjct: 1275 IKDAIRAAR----AQHTGNNVKELFRLDSPATPEKIRNAC 1310
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101
++PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 130 NQPEP-------TMEEIENAFQGNLCRCTGYRPILQGFRTFA 164
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG K + DP TTLL +LR KL
Sbjct: 2 TADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKL 41
>pdb|2CKJ|A Chain A, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|B Chain B, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|C Chain C, Human Milk Xanthine Oxidoreductase
pdb|2CKJ|D Chain D, Human Milk Xanthine Oxidoreductase
Length = 1333
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 289/820 (35%), Positives = 441/820 (53%), Gaps = 57/820 (6%)
Query: 107 EDLGDRLCGYSNSVLLKDSLMQQNHEQFDKSKVLTLLSSAEQVVRLSREYFPVGEPIPKS 166
E+L D+ CG + +L+ Q D + ++V + E VG P+P
Sbjct: 530 ENLEDK-CGKLDPTFASATLLFQKDPPAD-------VQLFQEVPKGQSEEDMVGRPLPHL 581
Query: 167 GAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVSAFLSYKDI 225
A +QASGEA++ DDIP N L V ST+ +I+S++ ++K +PG F+S D+
Sbjct: 582 AADMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKIKSIDTSEAKKVPGFVCFISADDV 641
Query: 226 PEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEP 285
P G NI E +FA + C G I VVADT + RAA + Y+ P
Sbjct: 642 P--GSNITGICN--DETVFAKDKVTCVGHIIGAVVADTPEHTQRAAQGVKITYEE---LP 694
Query: 286 PILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYYFYMETQTA 345
I+++E+A+ +SF+ P K GD+ KG +EAD+ ++S E+ +G Q +FY+ET
Sbjct: 695 AIITIEDAIKNNSFYG-PELKIEK--GDLKKGFSEADN-VVSGEIYIGGQEHFYLETHCT 750
Query: 346 LAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKAIKAMPVA 404
+AVP E + ++ S Q + +A+ LG+P + + V +R+GGGFGGK ++ V+
Sbjct: 751 IAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPANRIVVRVKRMGGGFGGKETRSTVVS 810
Query: 405 TACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQ 464
TA ALAAYK RPVR ++R DM++ GGRHP Y VGF G + AL+++ + G
Sbjct: 811 TAVALAAYKTGRPVRCMLDRDEDMLITGGRHPFLARYKVGFMKTGTVVALEVDHFSNVGN 870
Query: 465 YPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEH 523
D+S +I + + Y + ++C+TNLPS TA R G QG IAE +
Sbjct: 871 TQDLSQSIMERALFHMDNCYKIPNIRGTGRLCKTNLPSNTAFRGFGGPQGMLIAECWMSE 930
Query: 524 VASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSFNQRTEVIK 583
VA T M + VR NL+ L F + +LE +T+P W+ SS ++ R +
Sbjct: 931 VAVTCGMPAEEVRRKNLYKEGDLTHFNQ----KLEGFTLPRCWEECLASSQYHARKSEVD 986
Query: 584 EFNRSNLWRKKGISRVP----IVYDVPLMSTPGKV-SILSDGSVVVEVGGIELGQGLWTK 638
+FN+ N W+K+G+ +P I + VP ++ G + + +DGSV++ GG E+GQGL TK
Sbjct: 987 KFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALLHVYTDGSVLLTHGGTEMGQGLHTK 1046
Query: 639 VKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKIL 698
+ Q+A+ AL + + + T +V TA S ++ + QAV C+ +
Sbjct: 1047 MVQVASRALKIPT--------SKIYISETSTNTVPNTSPTAASVSADLNGQAVYAACQTI 1098
Query: 699 VERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF---------TSMKYL 748
++RL P +++ S WE + AY+ +VSLSA+ Y P+ Y
Sbjct: 1099 LKRLEPYKKK----NPSGSWEDWVTAAYMDTVSLSATGFYRTPNLGYSFETNSGNPFHYF 1154
Query: 749 NYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPT 808
+YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G F LEE
Sbjct: 1155 SYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHY 1214
Query: 809 NSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCA 868
+ +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL LA S+ A
Sbjct: 1215 SPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKKAIYASKAVGEPPLFLAASIFFA 1274
Query: 869 TRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
+ AIR AR F L+ PAT + ++ C
Sbjct: 1275 IKDAIRAAR----AQHTGNNVKELFRLDSPATPEKIRNAC 1310
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101
++PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 130 NQPEP-------TMEEIENAFQGNLCRCTGYRPILQGFRTFA 164
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG K + DP TTLL +LR KL
Sbjct: 2 TADKLVFFVNGRKVVEKNADPETTLLAYLRRKLGLSGTKL 41
>pdb|3SR6|C Chain C, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|L Chain L, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 745
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/768 (36%), Positives = 422/768 (54%), Gaps = 49/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P AA+QASGEA++ DDIP N L+ V ST+ +I+S+++ +++ +PG
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FLS DIP + + F E +FA + C G I VVADT + A RAA + V
Sbjct: 63 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 118
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++E+A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 119 YE--DL-PAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDH 171
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GGGFGGK
Sbjct: 172 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 231
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+ A ALAAYK PVR ++R DM++ GGRHP Y VGF G I AL++
Sbjct: 232 ETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEV 291
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ +AG D+S +I + + Y + ++C+TNL S TA R G Q F
Sbjct: 292 DHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALF 351
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + LE +++P WD SS +
Sbjct: 352 IAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQY 407
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R + +FN+ N W+K+G+ +P I + VP ++ G + + +DGSV+V GG E
Sbjct: 408 YARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTE 467
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + + T +V TA S ++ QA
Sbjct: 468 MGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQA 519
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ GS WE + AY VSLS + Y P+
Sbjct: 520 VYEACQTILKRLEPFKKK--NPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETN 575
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
+ Y YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 576 SGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 635
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 636 FTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLF 695
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A + AIR AR F L+ PAT + ++ C
Sbjct: 696 LGASVFFAIKDAIRAAR----AQHTNNNTKELFRLDSPATPEKIRNAC 739
>pdb|1FIQ|C Chain C, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|C Chain C, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|K Chain K, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 763
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/768 (36%), Positives = 422/768 (54%), Gaps = 49/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P AA+QASGEA++ DDIP N L+ V ST+ +I+S+++ +++ +PG
Sbjct: 4 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 63
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FLS DIP + + F E +FA + C G I VVADT + A RAA + V
Sbjct: 64 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 119
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++E+A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 120 YE--DL-PAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDH 172
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GGGFGGK
Sbjct: 173 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 232
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+ A ALAAYK PVR ++R DM++ GGRHP Y VGF G I AL++
Sbjct: 233 ETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEV 292
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ +AG D+S +I + + Y + ++C+TNL S TA R G Q F
Sbjct: 293 DHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALF 352
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + LE +++P WD SS +
Sbjct: 353 IAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQY 408
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R + +FN+ N W+K+G+ +P I + VP ++ G + + +DGSV+V GG E
Sbjct: 409 YARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTE 468
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + + T +V TA S ++ QA
Sbjct: 469 MGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQA 520
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ GS WE + AY VSLS + Y P+
Sbjct: 521 VYEACQTILKRLEPFKKK--NPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETN 576
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
+ Y YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 577 SGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 636
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 637 FTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLF 696
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A + AIR AR F L+ PAT + ++ C
Sbjct: 697 LGASVFFAIKDAIRAAR----AQHTNNNTKELFRLDSPATPEKIRNAC 740
>pdb|3ETR|C Chain C, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|N Chain N, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NS1|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVV|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
Length = 755
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/768 (36%), Positives = 422/768 (54%), Gaps = 49/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P AA+QASGEA++ DDIP N L+ V ST+ +I+S+++ +++ +PG
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FLS DIP + + F E +FA + C G I VVADT + A RAA + V
Sbjct: 63 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 118
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++E+A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 119 YE--DL-PAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDH 171
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GGGFGGK
Sbjct: 172 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 231
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+ A ALAAYK PVR ++R DM++ GGRHP Y VGF G I AL++
Sbjct: 232 ETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEV 291
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ +AG D+S +I + + Y + ++C+TNL S TA R G Q F
Sbjct: 292 DHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALF 351
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + LE +++P WD SS +
Sbjct: 352 IAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQY 407
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R + +FN+ N W+K+G+ +P I + VP ++ G + + +DGSV+V GG E
Sbjct: 408 YARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTE 467
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + + T +V TA S ++ QA
Sbjct: 468 MGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQA 519
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ GS WE + AY VSLS + Y P+
Sbjct: 520 VYEACQTILKRLEPFKKK--NPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETN 575
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
+ Y YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 576 SGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 635
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 636 FTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLF 695
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A + AIR AR F L+ PAT + ++ C
Sbjct: 696 LGASVFFAIKDAIRAAR----AQHTNNNTKELFRLDSPATPEKIRNAC 739
>pdb|3NRZ|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NVW|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|C Chain C, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|L Chain L, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
Length = 756
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/768 (36%), Positives = 422/768 (54%), Gaps = 49/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P AA+QASGEA++ DDIP N L+ V ST+ +I+S+++ +++ +PG
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FLS DIP + + F E +FA + C G I VVADT + A RAA + V
Sbjct: 63 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 118
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++E+A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 119 YE--DL-PAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDH 171
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GGGFGGK
Sbjct: 172 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 231
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+ A ALAAYK PVR ++R DM++ GGRHP Y VGF G I AL++
Sbjct: 232 ETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEV 291
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ +AG D+S +I + + Y + ++C+TNL S TA R G Q F
Sbjct: 292 DHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALF 351
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + LE +++P WD SS +
Sbjct: 352 IAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQY 407
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R + +FN+ N W+K+G+ +P I + VP ++ G + + +DGSV+V GG E
Sbjct: 408 YARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTE 467
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + + T +V TA S ++ QA
Sbjct: 468 MGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQA 519
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ GS WE + AY VSLS + Y P+
Sbjct: 520 VYEACQTILKRLEPFKKK--NPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETN 575
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
+ Y YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 576 SGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 635
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 636 FTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLF 695
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A + AIR AR F L+ PAT + ++ C
Sbjct: 696 LGASVFFAIKDAIRAAR----AQHTNNNTKELFRLDSPATPEKIRNAC 739
>pdb|3EUB|C Chain C, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|L Chain L, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|U Chain U, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|4 Chain 4, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
Length = 762
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/768 (36%), Positives = 422/768 (54%), Gaps = 49/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P AA+QASGEA++ DDIP N L+ V ST+ +I+S+++ +++ +PG
Sbjct: 3 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 62
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FLS DIP + + F E +FA + C G I VVADT + A RAA + V
Sbjct: 63 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 118
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++E+A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 119 YE--DL-PAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDH 171
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GGGFGGK
Sbjct: 172 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 231
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+ A ALAAYK PVR ++R DM++ GGRHP Y VGF G I AL++
Sbjct: 232 ETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEV 291
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ +AG D+S +I + + Y + ++C+TNL S TA R G Q F
Sbjct: 292 DHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALF 351
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + LE +++P WD SS +
Sbjct: 352 IAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQY 407
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R + +FN+ N W+K+G+ +P I + VP ++ G + + +DGSV+V GG E
Sbjct: 408 YARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTE 467
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + + T +V TA S ++ QA
Sbjct: 468 MGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQA 519
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ GS WE + AY VSLS + Y P+
Sbjct: 520 VYEACQTILKRLEPFKKK--NPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETN 575
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
+ Y YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 576 SGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 635
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 636 FTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLF 695
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A + AIR AR F L+ PAT + ++ C
Sbjct: 696 LGASVFFAIKDAIRAAR----AQHTNNNTKELFRLDSPATPEKIRNAC 739
>pdb|3UNA|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNA|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nad Bound
pdb|3UNC|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNC|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase To
1.65a Resolution
pdb|3UNI|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
pdb|3UNI|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
Nadh Bound
Length = 1332
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/768 (36%), Positives = 422/768 (54%), Gaps = 49/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P AA+QASGEA++ DDIP N L+ V ST+ +I+S+++ +++ +PG
Sbjct: 573 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 632
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FLS DIP + + F E +FA + C G I VVADT + A RAA + V
Sbjct: 633 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 688
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++E+A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 689 YE--DL-PAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDH 741
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GGGFGGK
Sbjct: 742 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 801
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+ A ALAAYK PVR ++R DM++ GGRHP Y VGF G I AL++
Sbjct: 802 ETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEV 861
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ +AG D+S +I + + Y + ++C+TNL S TA R G Q F
Sbjct: 862 DHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALF 921
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + LE +++P WD SS +
Sbjct: 922 IAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQY 977
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R + +FN+ N W+K+G+ +P I + VP ++ G + + +DGSV+V GG E
Sbjct: 978 YARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTE 1037
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + + T +V TA S ++ QA
Sbjct: 1038 MGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQA 1089
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ GS WE + AY VSLS + Y P+
Sbjct: 1090 VYEACQTILKRLEPFKKK--NPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETN 1145
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
+ Y YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 1146 SGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 1205
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 1206 FTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLF 1265
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A + AIR AR F L+ PAT + ++ C
Sbjct: 1266 LGASVFFAIKDAIRAAR----AQHTNNNTKELFRLDSPATPEKIRNAC 1309
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101
++PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 130 NQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR + KL
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKL 41
>pdb|1FO4|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1FO4|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Isolated From
Bovine Milk
pdb|1V97|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1V97|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase
Fyx-051 Bound Form
pdb|1VDV|A Chain A, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|1VDV|B Chain B, Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
pdb|3BDJ|A Chain A, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3BDJ|B Chain B, Crystal Structure Of Bovine Milk Xanthine Dehydrogenase With
A Covalently Bound Oxipurinol Inhibitor
pdb|3AM9|A Chain A, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AM9|B Chain B, Complex Of Bovine Xanthine Dehydrogenase And Trihydroxy
Fyx-051
pdb|3AMZ|A Chain A, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AMZ|B Chain B, Bovine Xanthine Oxidoreductase Urate Bound Form
pdb|3AX7|A Chain A, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX7|B Chain B, Bovine Xanthine Oxidase, Protease Cleaved Form
pdb|3AX9|A Chain A, Bovine Xanthone Oxidase, Protease Cleaved Form
pdb|3AX9|B Chain B, Bovine Xanthone Oxidase, Protease Cleaved Form
Length = 1332
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/768 (36%), Positives = 422/768 (54%), Gaps = 49/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P AA+QASGEA++ DDIP N L+ V ST+ +I+S+++ +++ +PG
Sbjct: 573 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 632
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FLS DIP + + F E +FA + C G I VVADT + A RAA + V
Sbjct: 633 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 688
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++E+A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 689 YE--DL-PAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDH 741
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GGGFGGK
Sbjct: 742 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 801
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+ A ALAAYK PVR ++R DM++ GGRHP Y VGF G I AL++
Sbjct: 802 ETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEV 861
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ +AG D+S +I + + Y + ++C+TNL S TA R G Q F
Sbjct: 862 DHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALF 921
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + LE +++P WD SS +
Sbjct: 922 IAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQY 977
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R + +FN+ N W+K+G+ +P I + VP ++ G + + +DGSV+V GG E
Sbjct: 978 YARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTE 1037
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + + T +V TA S ++ QA
Sbjct: 1038 MGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQA 1089
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ GS WE + AY VSLS + Y P+
Sbjct: 1090 VYEACQTILKRLEPFKKK--NPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETN 1145
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
+ Y YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 1146 SGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 1205
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 1206 FTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLF 1265
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A + AIR AR F L+ PAT + ++ C
Sbjct: 1266 LGASVFFAIKDAIRAAR----AQHTNNNTKELFRLDSPATPEKIRNAC 1309
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101
++PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 130 NQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR + KL
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKL 41
>pdb|1N5X|A Chain A, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
pdb|1N5X|B Chain B, Xanthine Dehydrogenase From Bovine Milk With Inhibitor Tei-
6720 Bound
Length = 1331
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 277/768 (36%), Positives = 422/768 (54%), Gaps = 49/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P AA+QASGEA++ DDIP N L+ V ST+ +I+S+++ +++ +PG
Sbjct: 572 VGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFV 631
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FLS DIP + + F E +FA + C G I VVADT + A RAA + V
Sbjct: 632 CFLSADDIPGSNET----GLFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVT 687
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++E+A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 688 YE--DL-PAIITIEDAIKNNSFYGSELKI---EKGDLKKGFSEADN-VVSGELYIGGQDH 740
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +A+P E+ + ++ S Q + +A+ LG+P + + V +R+GGGFGGK
Sbjct: 741 FYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGK 800
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+ A ALAAYK PVR ++R DM++ GGRHP Y VGF G I AL++
Sbjct: 801 ETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEV 860
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ +AG D+S +I + + Y + ++C+TNL S TA R G Q F
Sbjct: 861 DHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALF 920
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + LE +++P WD SS +
Sbjct: 921 IAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQ----RLEGFSVPRCWDECLKSSQY 976
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R + +FN+ N W+K+G+ +P I + VP ++ G + + +DGSV+V GG E
Sbjct: 977 YARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTE 1036
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + + T +V TA S ++ QA
Sbjct: 1037 MGQGLHTKMVQVASKALKIP--------ISKIYISETSTNTVPNSSPTAASVSTDIYGQA 1088
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ GS WE + AY VSLS + Y P+
Sbjct: 1089 VYEACQTILKRLEPFKKK--NPDGS--WEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETN 1144
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
+ Y YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 1145 SGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 1204
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F LEE + +G + + G TYKIP +IP +F V +L +KK + +SKA GEPPL
Sbjct: 1205 FTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLF 1264
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A + AIR AR F L+ PAT + ++ C
Sbjct: 1265 LGASVFFAIKDAIRAAR----AQHTNNNTKELFRLDSPATPEKIRNAC 1308
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101
++PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 129 NQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 163
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR + KL
Sbjct: 1 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKL 40
>pdb|2E3T|A Chain A, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
pdb|2E3T|B Chain B, Crystal Structure Of Rat Xanthine Oxidoreductase Mutant
(W335a And F336l)
Length = 1331
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 283/822 (34%), Positives = 443/822 (53%), Gaps = 61/822 (7%)
Query: 105 DIEDLGDRLCGYSNSVLLKDSLMQQNHEQFDKSKVLTLLSSAEQVVRLSREYFPVGEPIP 164
D+ED+ CG + +L+ Q D + L ++V + E VG P+P
Sbjct: 530 DLEDM----CGKLDPTFASATLLFQK----DPPANVQLF---QEVPKDQSEEDMVGRPLP 578
Query: 165 KSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVSAFLSYK 223
A +QASGEA++ DDIP N L V ST+ +I S++ ++K +PG FL+ +
Sbjct: 579 HLAANMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKITSIDTSEAKKVPGFVCFLTAE 638
Query: 224 DIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNL 283
D+P N + F E +FA + C G I VVADT + A RAA + Y+ +L
Sbjct: 639 DVP----NSNATGLFNDETVFAKDEVTCVGHIIGAVVADTPEHAQRAARGVKITYE--DL 692
Query: 284 EPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYYFYMETQ 343
P I+++++A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +FY+ET
Sbjct: 693 -PAIITIQDAINNNSFYGSEIKI---EKGDLKKGFSEADN-VVSGELYIGGQEHFYLETN 747
Query: 344 TALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKAIKAMP 402
+AVP E + ++ S Q + +A+ LG+P++ + V +R+GGGFGGK ++
Sbjct: 748 CTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDNRIVVRVKRMGGGFGGKETRSTV 807
Query: 403 VATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDA 462
V+TA ALAA+K RPVR ++R DM++ GGRHP +Y VGF G + AL++ +
Sbjct: 808 VSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEVAHFSNG 867
Query: 463 GQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVI 521
G D+S +I + + Y + ++C+TNLPS TA R G QG IAE +
Sbjct: 868 GNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNLPSNTAFRGFGGPQGMLIAEYWM 927
Query: 522 EHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSFNQRTEV 581
VA T + + VR N++ L F + +LE +T+P WD SS + R
Sbjct: 928 SEVAITCGLPAEEVRRKNMYKEGDLTHFNQ----KLEGFTLPRCWDECIASSQYLARKRE 983
Query: 582 IKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIELGQGLW 636
+++FNR N W+K+G+ +P I + +P ++ G V + +DGSV++ GG E+GQGL
Sbjct: 984 VEKFNRENCWKKRGLCIIPTKFGISFTLPFLNQGGALVHVYTDGSVLLTHGGTEMGQGLH 1043
Query: 637 TKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCK 696
TK+ Q+A+ AL + + + T +V TA S ++ + Q V C+
Sbjct: 1044 TKMVQVASRALKIPT--------SKIHISETSTNTVPNTSPTAASASADLNGQGVYEACQ 1095
Query: 697 ILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF---------TSMK 746
+++RL P +++ + WE + AY +VSLSA+ Y P+
Sbjct: 1096 TILKRLEPFKKK----KPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFH 1151
Query: 747 YLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEY 806
Y +YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G F +EE
Sbjct: 1152 YFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEEL 1211
Query: 807 PTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVH 866
+ +G + + G TYKIP +IP +F V +L +K+ + +SKA GEPPL LA S+
Sbjct: 1212 HYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIF 1271
Query: 867 CATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
A + AIR AR F L+ PAT + ++ C
Sbjct: 1272 FAIKDAIRAAR-----AQHGDNAKQLFQLDSPATPEKIRNAC 1308
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAAD 103
++PEP T+ E E A GNLCRCTGYRPI ++FA D
Sbjct: 129 NQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFAKD 165
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR KL
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKL 41
>pdb|3AN1|A Chain A, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
pdb|3AN1|B Chain B, Crystal Structure Of Rat D428a Mutant, Urate Bound Form
Length = 1331
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 283/822 (34%), Positives = 443/822 (53%), Gaps = 61/822 (7%)
Query: 105 DIEDLGDRLCGYSNSVLLKDSLMQQNHEQFDKSKVLTLLSSAEQVVRLSREYFPVGEPIP 164
D+ED+ CG + +L+ Q D + L ++V + E VG P+P
Sbjct: 530 DLEDM----CGKLDPTFASATLLFQK----DPPANVQLF---QEVPKDQSEEDMVGRPLP 578
Query: 165 KSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVSAFLSYK 223
A +QASGEA++ DDIP N L V ST+ +I S++ ++K +PG FL+ +
Sbjct: 579 HLAANMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKITSIDTSEAKKVPGFVCFLTAE 638
Query: 224 DIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNL 283
D+P N + F E +FA + C G I VVADT + A RAA + Y+ +L
Sbjct: 639 DVP----NSNATGLFNDETVFAKDEVTCVGHIIGAVVADTPEHAQRAARGVKITYE--DL 692
Query: 284 EPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYYFYMETQ 343
P I+++++A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +FY+ET
Sbjct: 693 -PAIITIQDAINNNSFYGSEIKI---EKGDLKKGFSEADN-VVSGELYIGGQEHFYLETN 747
Query: 344 TALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKAIKAMP 402
+AVP E + ++ S Q + +A+ LG+P++ + V +R+GGGFGGK ++
Sbjct: 748 CTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDNRIVVRVKRMGGGFGGKETRSTV 807
Query: 403 VATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDA 462
V+TA ALAA+K RPVR ++R DM++ GGRHP +Y VGF G + AL++ +
Sbjct: 808 VSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEVAHFSNG 867
Query: 463 GQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVI 521
G D+S +I + + Y + ++C+TNLPS TA R G QG IAE +
Sbjct: 868 GNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNLPSNTAFRGFGGPQGMLIAEYWM 927
Query: 522 EHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSFNQRTEV 581
VA T + + VR N++ L F + +LE +T+P WD SS + R
Sbjct: 928 SEVAITCGLPAEEVRRKNMYKEGDLTHFNQ----KLEGFTLPRCWDECIASSQYLARKRE 983
Query: 582 IKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIELGQGLW 636
+++FNR N W+K+G+ +P I + +P ++ G V + +DGSV++ GG E+GQGL
Sbjct: 984 VEKFNRENCWKKRGLCIIPTKFGISFTLPFLNQGGALVHVYTDGSVLLTHGGTEMGQGLH 1043
Query: 637 TKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCK 696
TK+ Q+A+ AL + + + T +V TA S ++ + Q V C+
Sbjct: 1044 TKMVQVASRALKIPT--------SKIHISETSTNTVPNTSPTAASASADLNGQGVYEACQ 1095
Query: 697 ILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF---------TSMK 746
+++RL P +++ + WE + AY +VSLSA+ Y P+
Sbjct: 1096 TILKRLEPFKKK----KPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFH 1151
Query: 747 YLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEY 806
Y +YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G F +EE
Sbjct: 1152 YFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTMEEL 1211
Query: 807 PTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVH 866
+ +G + + G TYKIP +IP +F V +L +K+ + +SKA GEPPL LA S+
Sbjct: 1212 HYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLFLASSIF 1271
Query: 867 CATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
A + AIR AR F L+ PAT + ++ C
Sbjct: 1272 FAIKDAIRAAR-----AQHGDNAKQLFQLDSPATPEKIRNAC 1308
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAAD 103
++PEP T+ E E A GNLCRCTGYRPI ++FA D
Sbjct: 129 NQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFAKD 165
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR KL
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKL 41
>pdb|1WYG|A Chain A, Crystal Structure Of A Rat Xanthine Dehydrogenase Triple
Mutant (C535a, C992r And C1324s)
Length = 1331
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 272/768 (35%), Positives = 423/768 (55%), Gaps = 50/768 (6%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVS 217
VG P+P A +QASGEA++ DDIP N L V ST+ +I S++ ++K +PG
Sbjct: 573 VGRPLPHLAANMQASGEAVYCDDIPRYENELSLRLVTSTRAHAKITSIDTSEAKKVPGFV 632
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
FL+ +D+P N + F E +FA + C G I VVADT + A RAA +
Sbjct: 633 CFLTAEDVP----NSNATGLFNDETVFAKDEVTCVGHIIGAVVADTPEHAQRAARGVKIT 688
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y+ +L P I+++++A+ +SF+ + GD+ KG +EAD+ ++S E+ +G Q +
Sbjct: 689 YE--DL-PAIITIQDAINNNSFYGSEIKI---EKGDLKKGFSEADN-VVSGELYIGGQEH 741
Query: 338 FYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGK 396
FY+ET +AVP E + ++ S Q + +A+ LG+P++ + V +R+GGGFGGK
Sbjct: 742 FYLETNCTIAVPKGEAGEMELFVSTQNTMKTQSFVAKMLGVPDNRIVVRVKRMGGGFGGK 801
Query: 397 AIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQL 456
++ V+TA ALAA+K RPVR ++R DM++ GGRHP +Y VGF G + AL++
Sbjct: 802 ETRSTVVSTALALAAHKTGRPVRCMLDRDEDMLITGGRHPFLAKYKVGFMKTGTVVALEV 861
Query: 457 NILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSF 515
+ G D+S +I + + Y + ++C+TNLPS TA R G QG
Sbjct: 862 AHFSNGGNTEDLSRSIMERALFHMDNAYKIPNIRGTGRICKTNLPSNTAFRGFGGPQGML 921
Query: 516 IAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSF 575
IAE + VA T + + VR N++ L F + +LE +T+P WD SS +
Sbjct: 922 IAEYWMSEVAITCGLPAEEVRRKNMYKEGDLTHFNQ----KLEGFTLPRCWDECIASSQY 977
Query: 576 NQRTEVIKEFNRSNLWRKKGISRVP----IVYDVPLMSTPGK-VSILSDGSVVVEVGGIE 630
R +++FNR N W+K+G+ +P I + +P ++ G V + +DGSV++ GG E
Sbjct: 978 LARKREVEKFNRENRWKKRGLCIIPTKFGISFTLPFLNQGGALVHVYTDGSVLLTHGGTE 1037
Query: 631 LGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQA 690
+GQGL TK+ Q+A+ AL + + + T +V TA S ++ + Q
Sbjct: 1038 MGQGLHTKMVQVASRALKIPT--------SKIHISETSTNTVPNTSPTAASASADLNGQG 1089
Query: 691 VRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSLY-LPDF------- 742
V C+ +++RL P +++ + WE + AY +VSLSA+ Y P+
Sbjct: 1090 VYEACQTILKRLEPFKKK----KPTGPWEAWVMDAYTSAVSLSATGFYKTPNLGYSFETN 1145
Query: 743 --TSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGF 800
Y +YG A SEVEI+ LTG+ +++DI+ D G SLNPA+D+GQ+EG+FVQG+G
Sbjct: 1146 SGNPFHYFSYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGL 1205
Query: 801 FMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLL 860
F +EE + +G + + G TYKIP +IP +F V +L +K+ + +SKA GEPPL
Sbjct: 1206 FTMEELHYSPEGSLHTRGPSTYKIPAFGSIPIEFRVSLLRDCPNKRAIYASKAVGEPPLF 1265
Query: 861 LAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
LA S+ A + AIR AR F L+ PAT + ++ C
Sbjct: 1266 LASSIFFAIKDAIRAAR-----AQHGDNAKQLFQLDSPATPEKIRNAC 1308
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAAD 103
++PEP T+ E E A GNLCRCTGYRPI ++FA D
Sbjct: 129 NQPEP-------TVEEIENAFQGNLCRCTGYRPILQGFRTFAKD 165
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR KL
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLVYLRRKLGLCGTKL 41
>pdb|3ZYV|A Chain A, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|B Chain B, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|C Chain C, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
pdb|3ZYV|D Chain D, Crystal Structure Of The Mouse Liver Aldehyde Oxydase 3
(Maox3)
Length = 1335
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 265/770 (34%), Positives = 414/770 (53%), Gaps = 56/770 (7%)
Query: 158 PVGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSKSLP--G 215
P+G PI A+GEA+F DD+ L+ A V S+K +I S++ S++L G
Sbjct: 579 PIGRPIMHQSGIKHATGEAVFCDDMSVLPGELFLAVVTSSKSHAKIISLD-ASEALASLG 637
Query: 216 VSAFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAV 275
V ++ +D+P G N R + E L+A + C GQ + V AD+ A +AA
Sbjct: 638 VVDVVTARDVP--GDN--GREE---ESLYAQDEVICVGQIVCAVAADSYAHAQQAAKKVK 690
Query: 276 VDYDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQ 335
+ Y ++EP I++V++A+ SF L G++ + AD +IL EV LG Q
Sbjct: 691 IVYQ--DIEPMIVTVQDALQYESFIGPERKL---EQGNVEEAFQCAD-QILEGEVHLGGQ 744
Query: 336 YYFYMETQTALAVPD-EDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFG 394
+FYMETQ+ VP ED + +Y S Q + +AR LGIP++ + +RVGG FG
Sbjct: 745 EHFYMETQSVRVVPKGEDKEMDIYVSSQDAAFTQEMVARTLGIPKNRINCHVKRVGGAFG 804
Query: 395 GKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITAL 454
GKA K +A+ A+AA K RP+R + R+ DM++ GGRHP+ +Y +GF +NGKI A
Sbjct: 805 GKASKPGLLASVAAVAAQKTGRPIRFILERRDDMLITGGRHPLLGKYKIGFMNNGKIKAA 864
Query: 455 QLNILIDAGQYPDVSPNIPAYMIGALKK-YDWGALHFDIKVCRTNLPSRTAMRAPGEVQG 513
+ + I+ G PD S + Y + L+ Y L +VC+TNLPS TA R G QG
Sbjct: 865 DIQLYINGGCTPDDSELVIEYALLKLENAYKIPNLRVRGRVCKTNLPSNTAFRGFGFPQG 924
Query: 514 SFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELEEYTIPLIWDRLAVSS 573
+F+ E + VA+ + + VR +N++ + + E + + W+ +S
Sbjct: 925 AFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRTIHNQ----EFDPTNLLQCWEACVENS 980
Query: 574 SFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLMST-----PGKVSILSDGSVVVEVGG 628
S+ R + + EFN+ W+K+GI+ +P+ + V T V I +DGSV+V GG
Sbjct: 981 SYYNRKKAVDEFNQQRFWKKRGIAIIPMKFSVGFPKTFYYQAAALVQIYTDGSVLVAHGG 1040
Query: 629 IELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASC 688
+ELGQG+ TK+ Q+A+ L + + + + T++V T ST ++ +
Sbjct: 1041 VELGQGINTKMIQVASRELKIP--------MSYIHLDEMSTVTVPNTVTTGASTGADVNG 1092
Query: 689 QAVRNCCKILVERLTPLRERLQAQMGSVKWETLIQQAYLQSVSLSASSL---YLPDFTSM 745
+AV+N C+IL++RL P+ + Q S WE +++A++QS+SLSA+ Y D
Sbjct: 1093 RAVQNACQILMKRLEPIIK----QNPSGTWEEWVKEAFVQSISLSATGYFRGYQADMDWE 1148
Query: 746 K-------YLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGI 798
K Y +GAA SEVEI+ LTG +++DI+ D S+NPAVD+GQIEG+FVQG+
Sbjct: 1149 KGEGDIFPYFVFGAACSEVEIDCLTGAHKNIRTDIVMDGSFSINPAVDIGQIEGAFVQGL 1208
Query: 799 GFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPP 858
G + LEE + +G++ + G YKI ++ IP++F+V +L + K + SSK GE
Sbjct: 1209 GLYTLEELKYSPEGVLYTRGPHQYKIASVTDIPEEFHVSLLTPTPNPKAIYSSKGLGEAG 1268
Query: 859 LLLAVSVHCATRAAIREARKXXXXXXXXXXXXXTFDLEVPATVQVVKELC 908
L SV A AA+ AR+ + + PAT +V++ C
Sbjct: 1269 TFLGCSVFFAIAAAVAAARE-------ERGLSPIWAINSPATAEVIRMAC 1311
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 7/41 (17%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSF 100
+ PEP + + + + GNLCRCTGYRPI ++ KSF
Sbjct: 134 NHPEP-------STEQIMETLGGNLCRCTGYRPIVESAKSF 167
>pdb|2W55|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
Length = 777
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 246/763 (32%), Positives = 375/763 (49%), Gaps = 76/763 (9%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKS-KSLPGVS 217
VG+P+P A +G+A ++DD+P P N L+ AF ST+ I ++++ + PGV
Sbjct: 3 VGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVI 62
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
A + D+P N S PEP+ A H GQPI V A + + A AA A +
Sbjct: 63 AVFTAADLPH--DNDASPAP-SPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARIT 119
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y P IL++++A+ S FE ++ + GD+ + A H + ++G Q +
Sbjct: 120 Y---APRPAILTLDQALAADSRFEGGPVIWAR--GDVETALAGAAH-LAEGCFEIGGQEH 173
Query: 338 FYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKA 397
FY+E Q ALA+P E +V++ S Q P +A LG+ H+VRV RR+GGGFGGK
Sbjct: 174 FYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKQ 232
Query: 398 IKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLN 457
+ +A ACA+AA RP ++ +R DMV+ G RH +I Y +G ++GK+
Sbjct: 233 SQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFV 292
Query: 458 ILIDAGQYPDVS-PNIPAYMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFI 516
L G D+S P M+ A Y AL + RTN S TA R G QG+
Sbjct: 293 HLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALG 352
Query: 517 AEAVIEHVASTLSMEVDFVRSINLH-------------------THNSLNLFYESSAGEL 557
E IEH+A + + +R++N + T + Y E+
Sbjct: 353 MERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQ---EV 409
Query: 558 EEYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLMSTP-----G 612
+ + + RL S++F R I +N +N +GI+ P+ + + T
Sbjct: 410 ADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGA 469
Query: 613 KVSILSDGSVVVEVGGIELGQGLWTKVKQMAA--FALSSIQCGGMGDLLETVRVIQADTL 670
V I +DGSV + GG E+GQGL K+ Q+AA + +Q VR+ DT
Sbjct: 470 LVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQ----------VRITATDTS 519
Query: 671 SVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPL---RE------------RLQAQMGS 715
V TA S+ ++ + AV++ C+ L RL RE ++QA S
Sbjct: 520 KVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKS 579
Query: 716 VKWETLIQQAYLQSVSLSASSLYLPDFTSMK----------YLNYGAAVSEVEINLLTGE 765
++ ++ AY+ +SLSA+ Y S Y YGAA++EV I+ LTGE
Sbjct: 580 WRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGE 639
Query: 766 TTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIP 825
I+++DI++D G SLNPA+D+GQIEG++VQG G+ EE + G +++ TYKIP
Sbjct: 640 NRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIP 699
Query: 826 TLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCA 868
P+ FNV + + + ++ + SKA GEPP LL +S A
Sbjct: 700 AFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLA 742
>pdb|1JRO|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRP|B Chain B, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|D Chain D, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|F Chain F, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|H Chain H, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|2W3R|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|B Chain B, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|D Chain D, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|F Chain F, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|H Chain H, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|B Chain B, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|D Chain D, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|F Chain F, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|H Chain H, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
Length = 777
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 246/763 (32%), Positives = 375/763 (49%), Gaps = 76/763 (9%)
Query: 159 VGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKS-KSLPGVS 217
VG+P+P A +G+A ++DD+P P N L+ AF ST+ I ++++ + PGV
Sbjct: 3 VGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVI 62
Query: 218 AFLSYKDIPEAGQNIGSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVD 277
A + D+P N S PEP+ A H GQPI V A + + A AA A +
Sbjct: 63 AVFTAADLPH--DNDASPAP-SPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARIT 119
Query: 278 YDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYY 337
Y P IL++++A+ S FE ++ + GD+ + A H + ++G Q +
Sbjct: 120 Y---APRPAILTLDQALAADSRFEGGPVIWAR--GDVETALAGAAH-LAEGCFEIGGQEH 173
Query: 338 FYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGGFGGKA 397
FY+E Q ALA+P E +V++ S Q P +A LG+ H+VRV RR+GGGFGGK
Sbjct: 174 FYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKE 232
Query: 398 IKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLN 457
+ +A ACA+AA RP ++ +R DMV+ G RH +I Y +G ++GK+
Sbjct: 233 SQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFV 292
Query: 458 ILIDAGQYPDVS-PNIPAYMIGALKKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFI 516
L G D+S P M+ A Y AL + RTN S TA R G QG+
Sbjct: 293 HLARCGWSADLSLPVCDRAMLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALG 352
Query: 517 AEAVIEHVASTLSMEVDFVRSINLH-------------------THNSLNLFYESSAGEL 557
E IEH+A + + +R++N + T + Y E+
Sbjct: 353 MERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIATKKTQTTHYGQ---EV 409
Query: 558 EEYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLMSTP-----G 612
+ + + RL S++F R I +N +N +GI+ P+ + + T
Sbjct: 410 ADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGA 469
Query: 613 KVSILSDGSVVVEVGGIELGQGLWTKVKQMAA--FALSSIQCGGMGDLLETVRVIQADTL 670
V I +DGSV + GG E+GQGL K+ Q+AA + +Q VR+ DT
Sbjct: 470 LVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQ----------VRITATDTS 519
Query: 671 SVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPL---RE------------RLQAQMGS 715
V TA S+ ++ + AV++ C+ L RL RE ++QA S
Sbjct: 520 KVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKS 579
Query: 716 VKWETLIQQAYLQSVSLSASSLYLPDFTSMK----------YLNYGAAVSEVEINLLTGE 765
++ ++ AY+ +SLSA+ Y S Y YGAA++EV I+ LTGE
Sbjct: 580 WRFAEIVAAAYMARISLSATGFYATPKLSWDRLRGQGRPFLYFAYGAAITEVVIDRLTGE 639
Query: 766 TTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIP 825
I+++DI++D G SLNPA+D+GQIEG++VQG G+ EE + G +++ TYKIP
Sbjct: 640 NRILRTDILHDAGASLNPALDIGQIEGAYVQGAGWLTTEELVWDHCGRLMTHAPSTYKIP 699
Query: 826 TLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCA 868
P+ FNV + + + ++ + SKA GEPP LL +S A
Sbjct: 700 AFSDRPRIFNVALWDQPNREETIFRSKAVGEPPFLLGISAFLA 742
>pdb|3HRD|A Chain A, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|E Chain E, Crystal Structure Of Nicotinate Dehydrogenase
Length = 425
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 175/404 (43%), Gaps = 32/404 (7%)
Query: 152 LSREYFPVGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KS 210
+ ++Y +G+ K + + G A F D P + LY ST P RI S+++ K+
Sbjct: 1 MGKDYQVLGKNKVKVDSLEKVMGTAKFAADYSFP-DMLYAGVFRSTVPHARIVSLDLSKA 59
Query: 211 KSLPGVSAFLSYKDIPEAGQNIGSRTKFG----PEPLFADELTHCAGQPIAFVVADTQKI 266
+++ GV A L Y IP G+N +FG EP D+ G IA V A T +
Sbjct: 60 RAIDGVEAVLDYHAIP--GKN-----RFGIIIKDEPCLVDDKVRRYGDAIAVVAAQTPDL 112
Query: 267 ANRAADLAVVDYDVGNLEPPILSVEEAV--------GRSSFFEVPSFLYPKSVGDISKGM 318
A D ++Y+ LE I ++E A+ G ++ +V Y GD+
Sbjct: 113 VQEALDAITIEYE--ELEG-IFTMERALEEDSPAIHGDTNIHQVKHLEY----GDVDAAF 165
Query: 319 NEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPEYAHATIARCLGIP 378
+ D ++ + ++E ++ D + L V S Q P Y +A L +P
Sbjct: 166 KQCD-IVVEDTYSTHRLTHMFIEPDAGVSYYDNEGMLTVVVSTQNPHYDRGEVAGMLALP 224
Query: 379 EHNVRVITRRVGGGFGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMK 438
VR+I GGGFGGK + V CAL Y +PV++ +R+ ++ RHPM
Sbjct: 225 NSKVRIIQATTGGGFGGKL--DLSVQCHCALLTYHTKKPVKMVRSREESTTVSSKRHPMT 282
Query: 439 IEYNVGFKSNGKITALQLNILIDAGQYPDVSPN-IPAYMIGALKKYDWGALHFDIKVCRT 497
+ G +G++ A+Q+ + D G Y P I + + Y + D K T
Sbjct: 283 MHCKTGATKDGRLQAVQVEMFGDTGAYASYGPAVITRATVHCMGPYVVPNVRVDAKFVYT 342
Query: 498 NLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLH 541
N P A R G Q S E + +A L M+ +R +N H
Sbjct: 343 NNPMSGAFRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAH 386
>pdb|1RM6|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|A Chain A, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|D Chain D, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 769
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 174/742 (23%), Positives = 302/742 (40%), Gaps = 97/742 (13%)
Query: 155 EYFPVGEPIPKSGAALQASGEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKS-KSL 213
++ VG P + +G+A + DI +P + L G + S RI +++ + ++L
Sbjct: 7 QHGTVGVRTPLVDGVEKVTGKAKYTADIAAP-DALVGRILRSPHAHARILAIDTSAAEAL 65
Query: 214 PGVSAFLSYKDIPEAGQNIGSRTKFGPEPL------FADELTHCAGQPIAFVVADTQKIA 267
GV A + + P FG P+ A + G P+A V A + A
Sbjct: 66 EGVIAVCTGAETP---------VPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTA 116
Query: 268 NRAADLAVVDYDVGNLEPPILSVEEAVGRSSFF---EVPSFLYPK---SVGDISKGMNEA 321
+A L VDY+V P ++ + A+ + + P+ + + GD++ EA
Sbjct: 117 EKALALIKVDYEV---LPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEA 173
Query: 322 DHKILSAEVKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPEYAHATIARCLGIPEH 380
D I + +ME LA D + L + ++ Q P Y H +A CL +
Sbjct: 174 D-LIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSA 232
Query: 381 NVRVITRRVGGGFGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIE 440
+RVI +GGGFG + +A+ L A K VR+ R+ + GR +++
Sbjct: 233 RIRVIKPFLGGGFGART-EALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVK 291
Query: 441 YNVGFKSNGKITALQLNILIDAGQYPDVSPNIPAYMIGALKK--YDWGALHFDIKVCRTN 498
+G K +GKI AL L G Y I GAL Y A+ D TN
Sbjct: 292 MKIGLKKDGKIAALALEATQAGGAYAGYG-IITILYTGALMHGLYHIPAIKHDAWRVYTN 350
Query: 499 LPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAGELE 558
P AMR G V EA++ + L ++ +R IN+ Y A +
Sbjct: 351 TPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMY---AQRVM 407
Query: 559 EYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPLMSTPG------ 612
Y +P +++ +S + +R + L + +G+ + + + V STP
Sbjct: 408 SYGVPECLEKVKAASGWEER--------KGKLPKGRGLG-IALSHFVSGTSTPKHWTGEP 458
Query: 613 ----KVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQAD 668
+ + DG + + G ++GQG T Q+AA L G L +RVI AD
Sbjct: 459 HATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVL--------GVRLSRIRVISAD 510
Query: 669 TLSVIQGGLTAGSTKS----EASCQAVRNCCKILV----ERLTPLRERLQ---------- 710
+ + + S + AS A +LV ++L E ++
Sbjct: 511 SALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSG 570
Query: 711 AQMGSVKWETLIQQAYLQSVSLSASSLYL--PDFTSMKYLN-----------YGAAVSEV 757
+Q + ++ +++ A + S +++ Y +F K + Y A V E
Sbjct: 571 SQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEA 630
Query: 758 EINLLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSE 817
++ +TG+ T + + D G++LNP GQ +G G+G + EE +G +V
Sbjct: 631 SVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEE-TVYDNGRMVHG 689
Query: 818 GTWTYKIPTLDTIPKQFNVEIL 839
Y++PT+ P ++E++
Sbjct: 690 NILDYRVPTIVESP---DIEVI 708
>pdb|1FFU|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFV|B Chain B, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|E Chain E, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 803
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 176/769 (22%), Positives = 306/769 (39%), Gaps = 106/769 (13%)
Query: 174 GEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEIKSK-SLPGVSAFLSYKDIPEAGQNI 232
G+ +VDDI P L+ V + RI+ + + ++PGV A L+ +D+ +
Sbjct: 33 GKGNYVDDIKMP-GMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLKPLKLHW 91
Query: 233 GSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYD--------VGNLE 284
+ ADE H Q +A V+AD + IA A + V+YD + L+
Sbjct: 92 MPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEYDELPVVIDPIDALK 151
Query: 285 P--PILSVEEAVGRSSFFEVP----SFLYPKSVGDISKGMNEADHKILSAEVKLGSQYYF 338
P P+L E+ G++S P + ++ GD + D +A V + SQ+ +
Sbjct: 152 PDAPVLR-EDLAGKTSGAHGPREHHNHIFTWGAGDKAA----TDAVFANAPVTV-SQHMY 205
Query: 339 Y-------METQTALAVPDE-DNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVG 390
Y +ET +A D L Y + Q P ++ GIPE VR+++ +G
Sbjct: 206 YPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLSGIPESKVRIVSPDIG 265
Query: 391 GGFGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGK 450
GGFG K + P +A+ L RPV+ +R ++ ++ + +GK
Sbjct: 266 GGFGNK-VGIYPGYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGK 324
Query: 451 ITALQLNILIDAGQYPDVSPNIPAYMIGALK----KYDWGALHFDIKVCRTNLPSRTAMR 506
I L++N++ D G + D + + G YD H +K TN +
Sbjct: 325 ILGLRVNVVADHGAF-DACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTN-------K 376
Query: 507 APGEV---------QGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSL----NLFYESS 553
APG V + ++ E +++ +A L+M+ +R+ N +E
Sbjct: 377 APGGVAYXXSFRVTEAVYLIERMVDVLAQKLNMDKAEIRAKNFIRKEQFPYTTQFGFEYD 436
Query: 554 AGELEEYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVYDVPL------ 607
+G+ + + D + + ++ + N L ++ +V P
Sbjct: 437 SGDYHT-ALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVVGAGPSKMCDIL 495
Query: 608 ---MSTPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRV 664
M ++ I GS + +G I GQG T Q+ A L G E ++V
Sbjct: 496 GVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATEL--------GIPSEVIQV 547
Query: 665 IQADTLSVIQGGLTAGSTKS-------EASCQAVRNCCKILVERLTPLRE--------RL 709
+ DT + G T GS + + + + + + + + E R
Sbjct: 548 EEGDTSTAPYGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVNENDLDWEVDRF 607
Query: 710 QAQMGSVKWETLIQ---QAYLQSVS-----LSASSLY-LPDFTSMKYLNYGAAVSEVEIN 760
+ + K++T+ QAY Q + L A Y P+FT +G + V+I+
Sbjct: 608 KVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHYYDPPNFT----YPFGIYLCVVDID 663
Query: 761 LLTGETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTW 820
TGET + + + DCG +NP + GQI G +G M ++ P ++ G ++
Sbjct: 664 RATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFDAQGNLLGNTLM 723
Query: 821 TYKIPTLDTIPK-QFNVEILNSGHH---KKRVLSSKASGEPPLLLAVSV 865
Y +PT P + + + S HH K V S G P A V
Sbjct: 724 DYFLPTAVETPHWETDHTVTPSPHHPIGAKGVAESPHVGSIPTFTAAVV 772
>pdb|1ZXI|B Chain B, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|E Chain E, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 809
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 171/756 (22%), Positives = 299/756 (39%), Gaps = 97/756 (12%)
Query: 174 GEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVSAFLSYKDIPEAGQNI 232
G+ +VDD+ P L+G FV S+ RI+S++ K+K+LPGV A L+ D+ +
Sbjct: 36 GKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLKPLNLHY 94
Query: 233 GSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYD--------VGNLE 284
+ + ADE Q +AFVVA + +A A +L VDY+ +E
Sbjct: 95 MPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKAME 154
Query: 285 P--PILS---VEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYYFY 339
P P+L ++ G + + ++ +GD D AEV + ++
Sbjct: 155 PDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGD----KEGTDATFAKAEVVSKDMFTYH 210
Query: 340 ------METQTALAVPDE-DNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGG 392
+ET +A D+ L ++ + Q P ++ G+PEH + VI +GGG
Sbjct: 211 RVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGG 270
Query: 393 FGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKIT 452
FG K + A +A+ L PV+ +R ++ + + +GKI
Sbjct: 271 FGNK-VGAYSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKIL 329
Query: 453 ALQLNILIDAGQY---PDVSPNIPAYMIGALKKYDWGALHFDIKVCRTNLPS-----RTA 504
A++ ++L D G + D S +M YD H + TN S R +
Sbjct: 330 AMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRCS 389
Query: 505 MRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAG-ELEEYTIP 563
R + + E IE +A L M+ +R N Y + G E + P
Sbjct: 390 FRV---TEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFP--YMAPLGWEYDSGNYP 444
Query: 564 LIWDRLAVSSSFNQ-RTEVIKE---FNRSNLWRKKGI-------------SRVPIVYDVP 606
L + + ++Q R E + F R GI S+ + V
Sbjct: 445 LAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCDILGVS 504
Query: 607 LMSTPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQ 666
+ + ++ I GSV+ +G GQG T Q+ A L G + + + +
Sbjct: 505 MFDS-AEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATEL--------GIPADDIMIEE 555
Query: 667 ADTLSVIQGGLTAGS-------TKSEASCQAVRNCCKILVERLTPLRE--------RLQA 711
+T + G T GS + + + ++ +++ + + E R +
Sbjct: 556 GNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRV 615
Query: 712 QMGSVKWETLIQQAYLQSVS--------LSASSLYLPDFTSMKYLNYGAAVSEVEINLLT 763
+ K++T+ + A+ S L A + Y P +M Y +GA ++I++ T
Sbjct: 616 KGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDP--PNMTY-PFGAYFCIMDIDIDT 672
Query: 764 GETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYK 823
G + + DCG +NP + GQ+ G + M +E + G V+ +
Sbjct: 673 GVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFF 732
Query: 824 IPTLDTIPK-QFNVEILNSGHHKKRVLSSKASGEPP 858
+PT PK + + + S HH + +K GE P
Sbjct: 733 LPTAVETPKWETDYTVTPSPHHP---IGAKGVGESP 765
>pdb|1N5W|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|B Chain B, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|E Chain E, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|B Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|E Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
Length = 809
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 171/756 (22%), Positives = 299/756 (39%), Gaps = 97/756 (12%)
Query: 174 GEAIFVDDIPSPINCLYGAFVYSTKPLVRIRSVEI-KSKSLPGVSAFLSYKDIPEAGQNI 232
G+ +VDD+ P L+G FV S+ RI+S++ K+K+LPGV A L+ D+ +
Sbjct: 36 GKGNYVDDVKLP-GMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLKPLNLHY 94
Query: 233 GSRTKFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYD--------VGNLE 284
+ + ADE Q +AFVVA + +A A +L VDY+ +E
Sbjct: 95 MPTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKAME 154
Query: 285 P--PILS---VEEAVGRSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLGSQYYFY 339
P P+L ++ G + + ++ +GD D AEV + ++
Sbjct: 155 PDAPLLREDIKDKMTGAHGARKHHNHIFRWEIGD----KEGTDATFAKAEVVSKDMFTYH 210
Query: 340 ------METQTALAVPDE-DNCLVVYSSIQCPEYAHATIARCLGIPEHNVRVITRRVGGG 392
+ET +A D+ L ++ + Q P ++ G+PEH + VI +GGG
Sbjct: 211 RVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGLPEHKIHVIAPDIGGG 270
Query: 393 FGGKAIKAMPVATACALAAYKLCRPVRIYVNRKTDMVMAGGRHPMKIEYNVGFKSNGKIT 452
FG K + A +A+ L PV+ +R ++ + + +GKI
Sbjct: 271 FGNK-VGAYSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKIL 329
Query: 453 ALQLNILIDAGQY---PDVSPNIPAYMIGALKKYDWGALHFDIKVCRTNLPS-----RTA 504
A++ ++L D G + D S +M YD H + TN S R +
Sbjct: 330 AMRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRCS 389
Query: 505 MRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTHNSLNLFYESSAG-ELEEYTIP 563
R + + E IE +A L M+ +R N Y + G E + P
Sbjct: 390 FRV---TEAVYAIERAIETLAQRLEMDSADLRIKNFIQPEQFP--YMAPLGWEYDSGNYP 444
Query: 564 LIWDRLAVSSSFNQ-RTEVIKE---FNRSNLWRKKGI-------------SRVPIVYDVP 606
L + + ++Q R E + F R GI S+ + V
Sbjct: 445 LAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGPSKNCDILGVS 504
Query: 607 LMSTPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQ 666
+ + ++ I GSV+ +G GQG T Q+ A L G + + + +
Sbjct: 505 MFDS-AEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATEL--------GIPADDIMIEE 555
Query: 667 ADTLSVIQGGLTAGS-------TKSEASCQAVRNCCKILVERLTPLRE--------RLQA 711
+T + G T GS + + + ++ +++ + + E R +
Sbjct: 556 GNTDTAPYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRV 615
Query: 712 QMGSVKWETLIQQAYLQSVS--------LSASSLYLPDFTSMKYLNYGAAVSEVEINLLT 763
+ K++T+ + A+ S L A + Y P +M Y +GA ++I++ T
Sbjct: 616 KGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDP--PNMTY-PFGAYFCIMDIDVDT 672
Query: 764 GETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYK 823
G + + DCG +NP + GQ+ G + M +E + G V+ +
Sbjct: 673 GVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFF 732
Query: 824 IPTLDTIPK-QFNVEILNSGHHKKRVLSSKASGEPP 858
+PT PK + + + S HH + +K GE P
Sbjct: 733 LPTAVETPKWETDYTVTPSPHHP---IGAKGVGESP 765
>pdb|1DGJ|A Chain A, Crystal Structure Of The Aldehyde Oxidoreductase From
Desulfovibrio Desulfuricans Atcc 27774
Length = 907
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 176/813 (21%), Positives = 310/813 (38%), Gaps = 111/813 (13%)
Query: 83 NLCRCTGYRPIADACKSFAADVDIEDLGDRLCGYSNSVLLKDSLMQQNHEQFDKSKVLTL 142
N+CRCTGY+P+ DA D + +L
Sbjct: 135 NICRCTGYKPLVDAV------------------------------------MDAAAILRG 158
Query: 143 LSSAEQV-VRLSREYFPVGEPIPKSGAALQASGEAIFVDD--IPSPINCLYGAFVYSTKP 199
+ E++ ++ + G IP+ A + +G A F D + P N L+ A +
Sbjct: 159 EKTVEEISFKMPADGRIWGSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVS 218
Query: 200 LVRIRSVEI-KSKSLPGVSAFLSYKDIPEAGQNIG------SRTKFGPEPLFADELTHCA 252
I+ ++ +++ +PGV L++KD+ + G ++ P+ D
Sbjct: 219 HALIKGIDTSEAEKMPGVYKVLTHKDVKGKNRITGLITFPTNKGDGWERPILNDSKIFQY 278
Query: 253 GQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVG 312
G +A V AD++ A AA+ D + L P +S EA+ + P P
Sbjct: 279 GDALAIVCADSEANARAAAEKVKFDLE---LLPEYMSAPEAMAPDAIEIHPG--TPNVYY 333
Query: 313 DISKGMNEADHKILSAEVKLGSQYYFYMETQTALAV-PD-------EDNCLVVYSSIQCP 364
D + E + + ++ +Y + Q L + PD E +V++S
Sbjct: 334 DQLEEKGEDTVPFFNDPANVVAEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHSKSVAI 393
Query: 365 EYAHATIARCLGIP-EHNVRVITRRVGGGFGGKAIKAMPVATACALAAYKLCRPVRIYVN 423
IA LG+ ++ ++ GG FG K M A+ A RP + N
Sbjct: 394 HLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPTMEALVGVAVMATG--RPCHLRYN 451
Query: 424 RKTDMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSPNIP---AYMIGAL 480
+ G R P GKI A++ + +D G Y + + A IGA
Sbjct: 452 YEQQQNYTGKRSPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGA- 510
Query: 481 KKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINL 540
Y + + TN A R G + F +E +++ +A L M+ +R++N
Sbjct: 511 -GYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNC 569
Query: 541 HTHNSLNLFYESSAGELEE-YTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRV 599
+ +S+G++ E ++P ++D++ + + + +KE RS K+G+
Sbjct: 570 YREGDT-----TSSGQIPEVMSLPEMFDKM--RPYYEESKKRVKE--RSTAEIKRGVGVA 620
Query: 600 PIVYDVPLM---STPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMG 656
VY L ++ V + DGSV + + GQG A AL +G
Sbjct: 621 LGVYGAGLDGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRP-----LG 675
Query: 657 DLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERL--------TPLRER 708
E + ++ DT G GS + A+R C++L+E + TP +
Sbjct: 676 ITPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGFFTPAEMK 735
Query: 709 LQAQMGSV--KWETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVEINLLTGET 766
+ + KW + + S + Y+ YG ++EV + + TG+
Sbjct: 736 AEGRPMRYDGKWTAPAKDCDAKGQG-SPFACYM----------YGLFLTEVAVEVATGKA 784
Query: 767 TIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPT 826
T+ + + D G+ N V GQI G QG+G + E+Y + L IP+
Sbjct: 785 TVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDY----EDLKKHSTMGGAGIPS 840
Query: 827 LDTIPKQFNVEILNSGHHKKRVLSSKASGEPPL 859
+ IP + + + K + GE PL
Sbjct: 841 IKMIPDDIEIVYVET-PRKDGPFGASGVGEMPL 872
>pdb|1SIJ|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A.
Aor Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
pdb|1VLB|A Chain A, Structure Refinement Of The Aldehyde Oxidoreductase From
Desulfovibrio Gigas At 1.28 A
pdb|3FAH|A Chain A, Glycerol Inhibited Form Of Aldehyde Oxidoreductase From
Desulfovibrio Gigas
pdb|3FC4|A Chain A, Ethylene Glycol Inhibited Form Of Aldehyde Oxidoreductase
From Desulfovibrio Gigas
pdb|3L4P|A Chain A, Crystal Structure Of The Aldehyde Dehydrogenase (A.K.A.
Aor Or Mop) Of Desulfovibrio Gigas Covalently Bound To
[aso3]-
Length = 907
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 181/819 (22%), Positives = 318/819 (38%), Gaps = 92/819 (11%)
Query: 83 NLCRCTGYRPIADACKSFAADVDIEDLGDRLCGYSNSVLLKDSLMQQNHEQFDKSKVLTL 142
N CRCTGY+P+ DA AA ++ K T
Sbjct: 135 NACRCTGYKPLVDAVMDAAAVIN------------------------------GKKPETD 164
Query: 143 LSSAEQVVRLSREYFPVGEPIPKSGAALQASGEAIFVDDI--PSPINCLYGAFVYSTKPL 200
L ++ + G P+ A + +G + D+ P L+ A V +
Sbjct: 165 LE-----FKMPADGRIWGSKYPRPTAVAKVTGTLDYGADLGLKMPAGTLHLAMVQAKVSH 219
Query: 201 VRIRSVEI-KSKSLPGVSAFLSYKDIPEAGQNIG------SRTKFGPEPLFADELTHCAG 253
I+ ++ ++ ++PGV + +++KD+ + G ++ P+ DE G
Sbjct: 220 ANIKGIDTSEALTMPGVHSVITHKDVKGKNRITGLITFPTNKGDGWDRPILCDEKVFQYG 279
Query: 254 QPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPS-----FLYP 308
IA V AD++ A AA+ VD + P +S A + P F P
Sbjct: 280 DCIALVCADSEANARAAAEKVKVDLEE---LPAYMSGPAAAAEDAIEIHPGTPNVYFEQP 336
Query: 309 KSVGDISKGMNEADHKILSAEVKLGSQYYFYMETQTALA-VPDEDNCLVVYSSIQCPEYA 367
G+ + + + + + +G Q + +E A A + D+ C + SI +
Sbjct: 337 IVKGEDTGPIFASADVTVEGDFYVGRQPHMPIEPDVAFAYMGDDGKCYIHSKSIGVHLHL 396
Query: 368 HATIARCLGIPEHNVRVITRRVGGGFGGKAIKAMPVATA-CALAAYKLCRPVRIYVNRKT 426
+ IA +G+ + ++ +GG FG K P + A A+AA RPV + N +
Sbjct: 397 Y-MIAPGVGLEPDQLVLVANPMGGTFG---YKFSPTSEALVAVAAMATGRPVHLRYNYQQ 452
Query: 427 DMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPDVSPNIP---AYMIGALKKY 483
G R P ++ K +G + A++ + L+D G Y + + A IGA Y
Sbjct: 453 QQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGA--GY 510
Query: 484 DWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINLHTH 543
+ + + TN +A R G Q F +E +++ +A L M+ +R N +
Sbjct: 511 NIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASECLMDMLAEKLGMDPLELRYKNAYRP 570
Query: 544 NSLNLFYESSAGELEEYTIPLIWDRLAVSSSFNQRTEVIKEFNRSNLWRKKGISRVPIVY 603
N + E E +++P + D+L + E K S KKG+ VY
Sbjct: 571 GDTN----PTGQEPEVFSLPDMIDQL--RPKYQAALE--KAQKESTATHKKGVGISIGVY 622
Query: 604 DVPL---MSTPGKVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLE 660
L ++ + +DG++ V + GQG A AL MG E
Sbjct: 623 GSGLDGPDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRP-----MGVAPE 677
Query: 661 TVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCKILVERLTPLRERLQA--QMGSVKW 718
++ +T + G + GS + + A+R C+ L++ ++ +
Sbjct: 678 KIKFTWPNTATTPNSGPSGGSRQQVMTGNAIRVACENLLKACEKPGGGYYTYDELKAADK 737
Query: 719 ETLIQQAYLQSVSLSASSLYLPDFTSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCG 778
T I + S + ++ + Y+ YG ++EV +++ TG+TT+ ++ D G
Sbjct: 738 PTKITGNWTASGATHCDAVTGLGKPFVVYM-YGVFMAEVTVDVATGQTTVDGMTLMADLG 796
Query: 779 QSLNPAVDLGQIEGSFVQGIGFFMLEEY-PTNSDGLVVSEGTWTYKIPTLDTIPKQFNVE 837
N GQI G QGIG + E++ +V G P + IP + ++
Sbjct: 797 SLCNQLATDGQIYGGLAQGIGLALSEDFEDIKKHATLVGAG-----FPFIKQIPDKLDIV 851
Query: 838 ILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 876
+N + GE PL S H A AI+ A
Sbjct: 852 YVNH-PRPDGPFGASGVGELPL---TSPHAAIINAIKSA 886
>pdb|1T3Q|B Chain B, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|E Chain E, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 788
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 171/701 (24%), Positives = 266/701 (37%), Gaps = 107/701 (15%)
Query: 202 RIRSVEI-KSKSLPGVSAFLSYKDIPEAGQNI-------GSRTKFGPEPLFADELTHCAG 253
RI S+++ +++LPGV D+ E Q I G +T +PL A+ +T G
Sbjct: 56 RIVSIDVADAQALPGVELVWCGADVAELSQGIVATMQVEGFQTTI--QPLLANGVTRFVG 113
Query: 254 QPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILSVEEAVGRSSFFEVPSFLYPKSVGD 313
+ +A VVA ++ IA AA L V+Y+ P + +E A+ + L V
Sbjct: 114 EIVAVVVASSRAIAEDAAQLIQVEYEE---LPAVTGIEAALEGEA--RANDTLAGNVVSR 168
Query: 314 ISKGMNE------ADHKILSAEVKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPEY 366
S+ +E + ++ + G MET+ A+A + L+++++ Q P +
Sbjct: 169 TSRARDELAPIFASSAGVVRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSF 228
Query: 367 AHATIARCLGIPEHNVRVITRRVGGGFGGKAIKAMPVATACALAAYKLCRPVRIYVNRKT 426
+A IPEH + V VGGGFG KA P L + L RPVR +R+
Sbjct: 229 VRTMVAMFCAIPEHLIEVRVPDVGGGFGQKA-HLHPEELLVCLLSRALGRPVRWIEDRQE 287
Query: 427 DMVMAGGRHPMKIEYNVGFKSNGKITALQLNILIDAGQYPD------VSPNIPAYMIGAL 480
+ + A + E + F +G+ AL+ + D G Y + V ++ +I L
Sbjct: 288 NFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGGAYNNLPWTQLVESHVGNAVI--L 345
Query: 481 KKYDWGALHFDIKVCRTNLPSRTAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRSINL 540
Y A+ + TN A R G G E +I+ A L + +R N+
Sbjct: 346 GVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNV 405
Query: 541 -------------HTHNSLNLFYESSAGELEEYTIPLIWDRLAVSSSFNQRTEVIKEFNR 587
TH Y + LEE P +F QR E
Sbjct: 406 VMPEDFPFTNRLGQTHREGT--YLQTINLLEEMVNP---------EAFRQRQ---AEARA 451
Query: 588 SNLWRKKGISRVPIVY-----DVPLMSTP------GKVSILSDGSVVVEVGGIELGQGLW 636
+ G+S V + + TP V I G V V GQG
Sbjct: 452 RGKYLGLGVSVFNEVTGTGTRTLSFLGTPTTTHDSATVRIDPTGKVTVTTSLASSGQGHE 511
Query: 637 TKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVIQGGLTAGSTKSEASCQAVRNCCK 696
T + Q+AA L + + VIQA + G S + ++
Sbjct: 512 TTLAQIAADVLG---------VPASDVVIQAGSTKNTYGFGAYASRGAVIGAGSIGRAAS 562
Query: 697 ILVERLTPL--------RERLQAQMGSVK----------WETLIQQAYLQ--------SV 730
I+ ER+ L E + + G V + ++ AY
Sbjct: 563 IVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDA 622
Query: 731 SLSASSLYLPDFTSMKYLNYGAAVSEVEINLLTGETTIVQSDIIYDCGQSLNPAVDLGQI 790
+L A++ Y P S L G + VEI+ T T + + DCG +NP + GQI
Sbjct: 623 TLEATATYDP---SDLVLANGGHAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQI 679
Query: 791 EGSFVQGIGFFMLEEYPTNSDGLVVSEGTWTYKIPTLDTIP 831
G Q IG +LEE + G +V+ Y IPT +P
Sbjct: 680 RGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVP 720
>pdb|3HRD|B Chain B, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|F Chain F, Crystal Structure Of Nicotinate Dehydrogenase
Length = 330
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 44/293 (15%)
Query: 614 VSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSVI 673
V I DGS V G ++GQG T + Q+AA L G E + V DT+
Sbjct: 28 VEIHGDGSANVMFGAADIGQGSGTAMAQIAAEEL--------GLDYEKIHVTWGDTMVTP 79
Query: 674 QGGLTAGSTKSEASCQAVRNCC--------KILVERLTPLRERLQAQMGSV--------- 716
GG T+ S ++ + AV C K E+L E L + +V
Sbjct: 80 DGGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAPEELSFRDNTVFITADPERS 139
Query: 717 --KWETLIQQAYLQSVSLSASSLYLPDFTSMKYLN----------YGAAVSEVEINLLTG 764
E + +++ A S Y P+ T + N Y ++EVE++ TG
Sbjct: 140 MTYGELMAAMKAAGRMAVGAGS-YNPNTTGLAPENMSGIPFEVYSYATTIAEVEVDTETG 198
Query: 765 ETTIVQSDIIYDCGQSLNPAVDLGQIEGSFVQGIGFFMLEEYPTNS-DGLVVSEGTWTYK 823
E +++ +D G +N ++ GQIEG G GF ++EE N+ +G + + Y
Sbjct: 199 EVDVLKVVSAHDVGTPINRSMVEGQIEGGVTMGQGFVLMEEIEVNTKNGAIKNPSMSKYI 258
Query: 824 IPTLDTIPKQFNVEILNSGHHKKRVLSSKASGEPPLLLAVSVHCATRAAIREA 876
IP+ +P+ ++ + + G +K GEP L+ + A AAI +A
Sbjct: 259 IPSNRDVPEIHSILVESEGGPGP--FGAKGVGEPALIPMIP---AVVAAIEDA 306
>pdb|1FIQ|A Chain A, Crystal Structure Of Xanthine Oxidase From Bovine Milk
pdb|3B9J|A Chain A, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
pdb|3B9J|I Chain I, Structure Of Xanthine Oxidase With
2-Hydroxy-6-Methylpurine
Length = 219
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
Query: 60 HRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101
++PEP T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 130 NQPEP-------TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR + KL
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKL 41
>pdb|3EUB|A Chain A, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|J Chain J, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|S Chain S, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
pdb|3EUB|2 Chain 2, Crystal Structure Of Desulfo-Xanthine Oxidase With
Xanthine
Length = 165
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 61 RPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101
R +P P T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 129 RNQPEP-----TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 164
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR + KL
Sbjct: 2 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKL 41
>pdb|3ETR|A Chain A, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3ETR|L Chain L, Crystal Structure Of Xanthine Oxidase In Complex With
Lumazine
pdb|3NRZ|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NRZ|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Hypoxanthine
pdb|3NS1|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NS1|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With 6- Mercaptopurine
pdb|3NVV|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVV|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Arsenite
pdb|3NVW|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVW|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Guanine
pdb|3NVY|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVY|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Quercetin
pdb|3NVZ|A Chain A, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3NVZ|J Chain J, Crystal Structure Of Bovine Xanthine Oxidase In Complex
With Indole-3- Aldehyde
pdb|3SR6|A Chain A, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
pdb|3SR6|J Chain J, Crystal Structure Of Reduced Bovine Xanthine Oxidase In
Complex With Arsenite
Length = 164
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Query: 61 RPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFA 101
R +P P T+ E E A GNLCRCTGYRPI ++FA
Sbjct: 128 RNQPEP-----TVEEIEDAFQGNLCRCTGYRPILQGFRTFA 163
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 TRHSVVFAVNGEKFEVSSVDPSTTLLEFLRYHTRFKSVKL 49
T +VF VNG+K + DP TTLL +LR + KL
Sbjct: 1 TADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKL 40
>pdb|1RM6|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1RM6|F Chain F, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|C Chain C, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
pdb|1SB3|F Chain F, Structure Of 4-Hydroxybenzoyl-Coa Reductase From Thauera
Aromatica
Length = 161
Score = 36.6 bits (83), Expect = 0.061, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 52 VLVDAEKTHRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAA 102
+++ +E R P P + E + A+AGNLCRCTGY I + ++ AA
Sbjct: 107 MIMASEALLRKNPSP-----SRDEIKAALAGNLCRCTGYVKIIKSVETAAA 152
>pdb|1N5W|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N5W|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Oxidized Form
pdb|1N60|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N60|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Cyanide- Inactivated Form
pdb|1N61|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N61|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Dithionite Reduced State
pdb|1N62|A Chain A, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N62|D Chain D, Crystal Structure Of The Mo,cu-co Dehydrogenase (codh), N-
Butylisocyanide-bound State
pdb|1N63|A Chain A, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1N63|D Chain D, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
Carbon Monoxide Reduced State
pdb|1ZXI|A Chain A, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
pdb|1ZXI|D Chain D, Reconstituted Co Dehydrogenase From Oligotropha
Carboxidovorans
Length = 166
Score = 36.2 bits (82), Expect = 0.097, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 58 KTHR---PEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACKSFAADVD 105
++HR P P T +E I GNLCRCTGY+ I A + AA ++
Sbjct: 112 RSHRLLQENPSP-----TEAEIRFGIGGNLCRCTGYQNIVKAIQYAAAKIN 157
>pdb|1T3Q|A Chain A, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|D Chain D, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 168
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 37 FLRYHTRFKSVKLGCVLVDAEKTHRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADA 96
F R+H +L A P P + E + ++GNLCRCTGY I DA
Sbjct: 99 FRRHHALQCGFCTAGMLATARSILAENPAP-----SRDEVREVMSGNLCRCTGYETIIDA 153
>pdb|1JRO|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|C Chain C, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|E Chain E, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRO|G Chain G, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus
pdb|1JRP|A Chain A, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|C Chain C, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|E Chain E, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
pdb|1JRP|G Chain G, Crystal Structure Of Xanthine Dehydrogenase Inhibited By
Alloxanthine From Rhodobacter Capsulatus
Length = 462
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 80 IAGNLCRCTGYRPI 93
+AGNLCRCTGY PI
Sbjct: 129 LAGNLCRCTGYAPI 142
>pdb|2W3R|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3R|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Hypoxanthine
pdb|2W3S|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W3S|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (Desulfo Form)
From Rhodobacter Capsulatus In Complex With Xanthine
pdb|2W54|A Chain A, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|C Chain C, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|E Chain E, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W54|G Chain G, Crystal Structure Of Xanthine Dehydrogenase From
Rhodobacter Capsulatus In Complex With Bound Inhibitor
Pterin-6-Aldehyde
pdb|2W55|A Chain A, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|C Chain C, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|E Chain E, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
pdb|2W55|G Chain G, Crystal Structure Of Xanthine Dehydrogenase (E232q
Variant) From Rhodobacter Capsulatus In Complex With
Hypoxanthine
Length = 462
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 80 IAGNLCRCTGYRPI 93
+AGNLCRCTGY PI
Sbjct: 129 LAGNLCRCTGYAPI 142
>pdb|1FFU|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFU|D Chain D, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava Which Lacks The Mo-Pyranopterin Moiety Of
The Molybdenum Cofactor
pdb|1FFV|A Chain A, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
pdb|1FFV|D Chain D, Carbon Monoxide Dehydrogenase From Hydrogenophaga
Pseudoflava
Length = 163
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 52 VLVDAEKTHRPEPPPGFSKLTISEAEKAIAGNLCRCTGYRPIADA 96
+L+ A + + P P T +E + GNLCRCTGY+ I A
Sbjct: 108 MLMRAYRFLQENPNP-----TEAEIRMGMTGNLCRCTGYQNIVKA 147
>pdb|3HRD|D Chain D, Crystal Structure Of Nicotinate Dehydrogenase
pdb|3HRD|H Chain H, Crystal Structure Of Nicotinate Dehydrogenase
Length = 160
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 64 PPPGFSKLTISEAEKAIAGNLCRCTGYRPIADACK 98
P P ++T+ A++GNLCRCTGY I A +
Sbjct: 120 PDPTDEEITV-----AMSGNLCRCTGYIKIHAAVR 149
>pdb|1LOS|A Chain A, Crystal Structure Of Orotidine Monophosphate Decarboxylase
Mutant Deltar203a Complexed With 6-Azaump
pdb|1LOS|B Chain B, Crystal Structure Of Orotidine Monophosphate Decarboxylase
Mutant Deltar203a Complexed With 6-Azaump
pdb|1LOS|C Chain C, Crystal Structure Of Orotidine Monophosphate Decarboxylase
Mutant Deltar203a Complexed With 6-Azaump
pdb|1LOS|D Chain D, Crystal Structure Of Orotidine Monophosphate Decarboxylase
Mutant Deltar203a Complexed With 6-Azaump
Length = 224
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 237 KFGPEPLFADELTHCAGQPIAFVVADTQKIANRAADLAVVDYDVGNLEPPILS-VEEAVG 295
+ G E E++H + F+ +IA DL V +Y + P LS + E +G
Sbjct: 115 EMGREVFLLTEMSHPGAE--MFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIG 172
Query: 296 RSSFFEVPSFLYPKSVGDISKGMNEADHKILSAEVKLG 333
+ SF L VGD + + AD I+ A + L
Sbjct: 173 QDSF------LISPGVGDPGETLRFADAIIVGASIYLA 204
>pdb|4AF0|A Chain A, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 617 LSDGSVVVEVGGIELGQGLWTKVKQMAAFA----LSSIQCGGMGDLLETVRVIQADTLSV 672
+ GS+ + + +G+ T V +A FA + I GG+G++ + + +V
Sbjct: 351 MGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAV 410
Query: 673 IQGGLTAGSTKS 684
+ GGL AG+T+S
Sbjct: 411 MMGGLLAGTTES 422
>pdb|4AF0|B Chain B, Crystal Structure Of Cryptococcal Inosine Monophosphate
Dehydrogenase
Length = 556
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 617 LSDGSVVVEVGGIELGQGLWTKVKQMAAFA----LSSIQCGGMGDLLETVRVIQADTLSV 672
+ GS+ + + +G+ T V +A FA + I GG+G++ + + +V
Sbjct: 351 MGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAV 410
Query: 673 IQGGLTAGSTKS 684
+ GGL AG+T+S
Sbjct: 411 MMGGLLAGTTES 422
>pdb|3FCP|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|B Chain B, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|C Chain C, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|D Chain D, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|E Chain E, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|F Chain F, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|G Chain G, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|H Chain H, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
Length = 381
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 613 KVSILSDGSVVVEVGGIELGQGLWTKVKQMAAFALSSIQCGGMGDLLETVRVIQADTLSV 672
+ +IL+D +V G +L Q +T A+AL + GG +L RV QA + +
Sbjct: 244 ETAILADEAVATAYDGYQLAQQGFT-----GAYALKIAKAGGPNSVLALARVAQAAGIGL 298
Query: 673 IQGGLTAGSTKSEASCQA 690
G + G+ + AS A
Sbjct: 299 YGGTMLEGTVGTVASLHA 316
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,414,877
Number of Sequences: 62578
Number of extensions: 1063226
Number of successful extensions: 2337
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2088
Number of HSP's gapped (non-prelim): 76
length of query: 937
length of database: 14,973,337
effective HSP length: 108
effective length of query: 829
effective length of database: 8,214,913
effective search space: 6810162877
effective search space used: 6810162877
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)