Query 002314
Match_columns 937
No_of_seqs 578 out of 3245
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 21:18:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002314.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002314hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03064 alpha,alpha-trehalose 100.0 2E-188 5E-193 1696.4 96.2 926 1-930 1-933 (934)
2 PLN02205 alpha,alpha-trehalose 100.0 2E-158 3E-163 1446.2 80.6 746 93-929 59-850 (854)
3 PLN03063 alpha,alpha-trehalose 100.0 6E-157 1E-161 1434.1 87.8 784 87-929 5-789 (797)
4 PRK14501 putative bifunctional 100.0 3E-142 6E-147 1306.9 81.1 721 94-925 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 5E-121 1E-125 1083.8 62.8 722 93-921 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 6E-115 1E-119 991.6 47.0 450 94-564 2-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 2E-113 4E-118 990.1 49.2 454 99-561 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 9E-114 2E-118 995.1 37.6 462 95-561 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 4E-109 9E-114 938.1 47.2 463 90-562 11-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 2E-104 4E-109 920.6 50.5 452 95-560 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 3.4E-95 7E-100 848.4 49.1 456 95-559 1-459 (460)
12 COG1877 OtsB Trehalose-6-phosp 100.0 1.3E-39 2.8E-44 348.0 25.3 252 577-927 4-255 (266)
13 PLN02151 trehalose-phosphatase 100.0 2.9E-39 6.3E-44 357.1 25.9 245 585-927 92-348 (354)
14 PLN03017 trehalose-phosphatase 100.0 8.7E-39 1.9E-43 354.2 28.2 253 577-927 97-362 (366)
15 PLN02580 trehalose-phosphatase 100.0 1.6E-38 3.5E-43 355.3 27.6 246 583-927 111-380 (384)
16 TIGR02468 sucrsPsyn_pln sucros 100.0 5.4E-36 1.2E-40 366.0 48.3 528 232-810 311-994 (1050)
17 PF02358 Trehalose_PPase: Treh 100.0 1.5E-39 3.3E-44 347.9 13.2 203 595-812 1-205 (235)
18 TIGR00685 T6PP trehalose-phosp 100.0 2.6E-36 5.6E-41 324.8 27.5 238 589-924 1-243 (244)
19 PRK10187 trehalose-6-phosphate 100.0 8.7E-36 1.9E-40 324.2 27.1 237 590-929 13-249 (266)
20 cd03792 GT1_Trehalose_phosphor 99.9 3.6E-25 7.9E-30 252.2 26.8 300 210-561 65-371 (372)
21 PRK15484 lipopolysaccharide 1, 99.9 2.4E-24 5.2E-29 246.7 33.3 273 230-562 98-378 (380)
22 PLN02939 transferase, transfer 99.9 2.5E-24 5.5E-29 260.3 34.5 322 210-563 589-968 (977)
23 PRK00654 glgA glycogen synthas 99.9 2.4E-24 5.3E-29 253.2 32.4 311 216-562 103-463 (466)
24 PLN02316 synthase/transferase 99.9 5.3E-24 1.1E-28 262.0 34.7 311 209-562 687-1034(1036)
25 TIGR02472 sucr_P_syn_N sucrose 99.9 2.3E-24 5E-29 251.5 29.8 315 211-559 94-438 (439)
26 TIGR02095 glgA glycogen/starch 99.9 6.2E-24 1.4E-28 250.2 30.9 314 212-561 109-472 (473)
27 PRK14098 glycogen synthase; Pr 99.9 8.6E-24 1.9E-28 249.2 31.8 323 207-562 117-486 (489)
28 PRK15427 colanic acid biosynth 99.9 2.9E-23 6.3E-28 239.8 31.2 276 231-560 118-404 (406)
29 PRK14099 glycogen synthase; Pr 99.9 6.8E-23 1.5E-27 241.4 33.6 318 209-563 109-480 (485)
30 TIGR03449 mycothiol_MshA UDP-N 99.9 9.9E-23 2.2E-27 234.4 33.6 289 231-562 101-402 (405)
31 cd03818 GT1_ExpC_like This fam 99.9 3.1E-23 6.7E-28 238.5 27.5 284 231-556 87-395 (396)
32 TIGR02470 sucr_synth sucrose s 99.9 2.9E-22 6.3E-27 241.9 34.5 331 211-559 364-745 (784)
33 cd03791 GT1_Glycogen_synthase_ 99.9 1.7E-22 3.8E-27 237.8 31.9 313 211-559 109-474 (476)
34 PLN00142 sucrose synthase 99.9 4E-22 8.6E-27 240.7 31.3 331 211-559 387-768 (815)
35 TIGR02149 glgA_Coryne glycogen 99.9 9.6E-22 2.1E-26 224.3 30.9 287 230-561 82-386 (388)
36 PLN02871 UDP-sulfoquinovose:DA 99.9 7.9E-22 1.7E-26 231.9 30.2 277 231-562 144-435 (465)
37 cd03800 GT1_Sucrose_synthase T 99.9 1.5E-21 3.2E-26 222.4 31.5 297 221-556 91-397 (398)
38 cd03813 GT1_like_3 This family 99.9 5.7E-22 1.2E-26 233.7 28.8 283 224-557 166-472 (475)
39 cd03796 GT1_PIG-A_like This fa 99.9 1.7E-21 3.7E-26 224.3 30.8 278 231-563 88-369 (398)
40 TIGR01484 HAD-SF-IIB HAD-super 99.9 1.6E-22 3.5E-27 211.5 16.8 194 593-812 1-200 (204)
41 TIGR03088 stp2 sugar transfera 99.9 5.7E-21 1.2E-25 217.3 30.1 232 287-561 136-372 (374)
42 cd05844 GT1_like_7 Glycosyltra 99.9 8.9E-21 1.9E-25 214.1 30.4 275 225-556 77-365 (367)
43 PLN02949 transferase, transfer 99.9 3.1E-20 6.8E-25 217.1 31.8 315 180-562 108-457 (463)
44 cd04951 GT1_WbdM_like This fam 99.9 2E-20 4.3E-25 209.7 29.0 280 226-559 75-358 (360)
45 cd03805 GT1_ALG2_like This fam 99.9 2.2E-20 4.9E-25 213.3 29.9 283 230-554 93-391 (392)
46 cd03806 GT1_ALG11_like This fa 99.9 1.3E-20 2.8E-25 218.7 28.1 273 232-550 108-415 (419)
47 cd04962 GT1_like_5 This family 99.9 8.9E-20 1.9E-24 206.2 32.5 277 231-561 84-370 (371)
48 PRK15490 Vi polysaccharide bio 99.9 4.7E-20 1E-24 214.1 30.7 289 231-561 280-575 (578)
49 PRK10307 putative glycosyl tra 99.9 8E-20 1.7E-24 211.3 30.4 285 230-563 105-409 (412)
50 cd03819 GT1_WavL_like This fam 99.9 3.9E-20 8.5E-25 207.4 26.9 265 231-545 78-348 (355)
51 TIGR02918 accessory Sec system 99.9 1.5E-19 3.3E-24 213.3 31.6 275 229-561 209-499 (500)
52 cd03822 GT1_ecORF704_like This 99.9 8.4E-20 1.8E-24 204.0 27.6 281 231-559 76-365 (366)
53 cd03793 GT1_Glycogen_synthase_ 99.9 1.4E-19 3.1E-24 210.2 29.8 322 230-560 147-585 (590)
54 PRK15179 Vi polysaccharide bio 99.9 7.6E-20 1.6E-24 221.3 28.4 281 231-559 400-691 (694)
55 cd03809 GT1_mtfB_like This fam 99.9 3.8E-20 8.2E-25 206.8 23.3 276 230-556 84-364 (365)
56 cd03812 GT1_CapH_like This fam 99.9 1.2E-19 2.6E-24 203.7 27.3 252 231-532 80-336 (358)
57 cd04946 GT1_AmsK_like This fam 99.9 2.2E-19 4.7E-24 207.8 29.8 271 231-556 127-406 (407)
58 cd03821 GT1_Bme6_like This fam 99.9 1.9E-19 4E-24 200.4 28.2 278 229-556 85-374 (375)
59 PRK10125 putative glycosyl tra 99.9 8.6E-20 1.9E-24 210.7 26.3 188 326-560 212-403 (405)
60 cd03799 GT1_amsK_like This is 99.8 7.3E-19 1.6E-23 196.7 29.8 267 231-554 79-354 (355)
61 cd04949 GT1_gtfA_like This fam 99.8 2.5E-19 5.3E-24 203.6 26.2 268 229-554 97-371 (372)
62 cd03807 GT1_WbnK_like This fam 99.8 7.3E-19 1.6E-23 194.9 28.3 277 231-558 80-363 (365)
63 cd03817 GT1_UGDG_like This fam 99.8 5.8E-19 1.3E-23 196.7 27.6 264 231-547 84-362 (374)
64 PRK15126 thiamin pyrimidine py 99.8 1.4E-19 3.1E-24 197.9 20.5 191 591-812 2-225 (272)
65 COG0561 Cof Predicted hydrolas 99.8 1.3E-19 2.7E-24 197.4 19.8 194 590-812 2-226 (264)
66 cd03801 GT1_YqgM_like This fam 99.8 1.5E-18 3.2E-23 191.3 28.4 278 231-559 85-373 (374)
67 PHA01633 putative glycosyl tra 99.8 1.1E-18 2.4E-23 194.8 27.2 191 331-556 118-334 (335)
68 cd03794 GT1_wbuB_like This fam 99.8 2E-18 4.4E-23 192.7 29.3 280 229-556 97-394 (394)
69 cd03814 GT1_like_2 This family 99.8 7.8E-19 1.7E-23 195.8 25.8 272 231-559 83-363 (364)
70 cd03798 GT1_wlbH_like This fam 99.8 1.7E-18 3.8E-23 191.7 28.1 282 230-561 92-376 (377)
71 cd03820 GT1_amsD_like This fam 99.8 1.8E-18 3.9E-23 190.1 26.7 262 231-556 83-347 (348)
72 PRK03669 mannosyl-3-phosphogly 99.8 8.4E-19 1.8E-23 191.9 23.5 186 590-812 6-227 (271)
73 PRK01158 phosphoglycolate phos 99.8 5.9E-19 1.3E-23 187.8 21.7 181 591-812 3-194 (230)
74 PLN02846 digalactosyldiacylgly 99.8 7E-19 1.5E-23 203.6 23.2 265 231-561 116-391 (462)
75 PLN02501 digalactosyldiacylgly 99.8 1.7E-18 3.6E-23 202.9 26.4 263 231-558 434-706 (794)
76 PRK09922 UDP-D-galactose:(gluc 99.8 2.1E-18 4.6E-23 195.9 26.8 239 226-529 80-326 (359)
77 PRK10513 sugar phosphate phosp 99.8 4E-19 8.6E-24 194.0 19.8 195 590-812 2-233 (270)
78 TIGR03087 stp1 sugar transfera 99.8 3E-18 6.5E-23 197.3 28.0 281 219-560 90-395 (397)
79 cd03823 GT1_ExpE7_like This fa 99.8 6.9E-18 1.5E-22 187.5 28.8 258 231-558 96-356 (359)
80 PHA01630 putative group 1 glyc 99.8 4.3E-18 9.3E-23 191.3 25.9 213 287-561 94-330 (331)
81 PRK10976 putative hydrolase; P 99.8 1.7E-18 3.7E-23 188.6 20.5 192 591-812 2-227 (266)
82 cd03808 GT1_cap1E_like This fa 99.8 1.2E-17 2.7E-22 184.3 27.2 273 231-556 80-358 (359)
83 cd03802 GT1_AviGT4_like This f 99.8 1.7E-17 3.6E-22 184.6 27.2 242 231-557 87-332 (335)
84 cd03795 GT1_like_4 This family 99.8 1.3E-17 2.9E-22 186.6 26.2 266 230-548 82-353 (357)
85 cd03816 GT1_ALG1_like This fam 99.8 1.4E-17 3E-22 193.2 26.9 267 230-545 94-401 (415)
86 TIGR01482 SPP-subfamily Sucros 99.8 4.9E-18 1.1E-22 180.1 18.9 181 594-812 1-186 (225)
87 PLN02887 hydrolase family prot 99.8 1.1E-17 2.3E-22 198.4 23.4 198 583-812 301-544 (580)
88 cd04955 GT1_like_6 This family 99.8 4E-17 8.7E-22 183.4 27.0 268 231-559 84-362 (363)
89 PF08282 Hydrolase_3: haloacid 99.8 2E-17 4.3E-22 176.5 23.0 184 594-812 1-223 (254)
90 cd03804 GT1_wbaZ_like This fam 99.8 2.9E-17 6.4E-22 185.2 24.8 248 230-554 82-349 (351)
91 PRK10530 pyridoxal phosphate ( 99.8 1.9E-17 4.1E-22 180.7 22.1 189 591-812 3-236 (272)
92 PTZ00174 phosphomannomutase; P 99.8 2.2E-17 4.8E-22 178.2 21.1 198 589-812 3-225 (247)
93 TIGR01485 SPP_plant-cyano sucr 99.8 9.1E-18 2E-22 181.4 17.0 191 591-810 1-202 (249)
94 cd03825 GT1_wcfI_like This fam 99.8 1E-16 2.2E-21 180.1 26.1 197 325-561 158-364 (365)
95 PLN02423 phosphomannomutase 99.8 1E-16 2.2E-21 172.7 23.3 190 591-809 7-222 (245)
96 cd03811 GT1_WabH_like This fam 99.7 1.2E-16 2.7E-21 175.5 23.9 246 231-527 81-332 (353)
97 TIGR02471 sucr_syn_bact_C sucr 99.7 2.8E-17 6E-22 176.1 17.2 184 593-812 1-196 (236)
98 TIGR00099 Cof-subfamily Cof su 99.7 4.2E-17 9.1E-22 176.8 17.9 189 593-812 1-225 (256)
99 PLN02275 transferase, transfer 99.7 4.2E-16 9.2E-21 178.1 26.9 242 230-525 99-371 (371)
100 TIGR01487 SPP-like sucrose-pho 99.7 6.9E-17 1.5E-21 170.5 18.4 182 591-812 1-184 (215)
101 TIGR02463 MPGP_rel mannosyl-3- 99.7 8.2E-17 1.8E-21 170.6 18.5 184 593-812 1-216 (221)
102 COG0297 GlgA Glycogen synthase 99.7 1.8E-15 3.8E-20 175.6 28.7 319 210-562 107-478 (487)
103 TIGR01486 HAD-SF-IIB-MPGP mann 99.7 1.7E-16 3.7E-21 172.2 19.0 183 593-812 1-215 (256)
104 PRK05749 3-deoxy-D-manno-octul 99.7 3.8E-15 8.3E-20 173.2 25.8 286 223-560 117-418 (425)
105 PRK00192 mannosyl-3-phosphogly 99.7 1.3E-15 2.7E-20 167.0 19.3 185 590-812 3-228 (273)
106 PF00534 Glycos_transf_1: Glyc 99.7 1.1E-15 2.3E-20 154.6 15.6 156 361-541 13-171 (172)
107 PLN02382 probable sucrose-phos 99.7 8.9E-16 1.9E-20 176.9 16.9 196 586-811 4-214 (413)
108 PRK12702 mannosyl-3-phosphogly 99.7 3.4E-15 7.3E-20 160.9 18.8 188 591-812 1-247 (302)
109 PRK14502 bifunctional mannosyl 99.7 2.4E-15 5.1E-20 177.7 19.2 188 589-812 414-652 (694)
110 TIGR02461 osmo_MPG_phos mannos 99.6 4.7E-15 1E-19 157.8 14.5 186 593-812 1-220 (225)
111 PF05116 S6PP: Sucrose-6F-phos 99.6 2.9E-15 6.3E-20 161.7 11.3 188 591-810 2-200 (247)
112 cd04950 GT1_like_1 Glycosyltra 99.5 8.2E-13 1.8E-17 151.2 25.4 264 231-561 102-371 (373)
113 KOG1111 N-acetylglucosaminyltr 99.5 2.9E-13 6.2E-18 146.4 17.3 168 324-527 167-335 (426)
114 PLN02605 monogalactosyldiacylg 99.5 4.7E-12 1E-16 145.5 26.8 217 287-558 150-378 (382)
115 KOG0853 Glycosyltransferase [C 99.4 1.2E-11 2.6E-16 142.0 21.1 251 283-560 205-466 (495)
116 COG0438 RfaG Glycosyltransfera 99.4 2.5E-10 5.4E-15 124.0 27.8 198 327-561 173-376 (381)
117 PRK13609 diacylglycerol glucos 99.4 2.5E-10 5.4E-15 130.9 28.0 270 222-564 96-374 (380)
118 cd03785 GT1_MurG MurG is an N- 99.3 3E-10 6.6E-15 128.0 24.1 248 224-550 83-346 (350)
119 cd01635 Glycosyltransferase_GT 99.3 8E-11 1.7E-15 122.3 17.7 118 368-509 109-229 (229)
120 PRK00726 murG undecaprenyldiph 99.3 4.3E-10 9.4E-15 127.6 23.3 252 231-560 91-356 (357)
121 TIGR00236 wecB UDP-N-acetylglu 99.2 1.2E-09 2.6E-14 124.5 25.1 251 232-539 87-345 (365)
122 TIGR02094 more_P_ylases alpha- 99.2 1E-08 2.2E-13 123.4 31.6 182 362-558 388-597 (601)
123 TIGR01133 murG undecaprenyldip 99.2 8.6E-10 1.9E-14 124.2 21.2 181 329-553 153-346 (348)
124 PRK13608 diacylglycerol glucos 99.2 4.7E-09 1E-13 121.1 26.7 262 231-564 104-374 (391)
125 cd03786 GT1_UDP-GlcNAc_2-Epime 99.2 3.1E-09 6.8E-14 120.5 23.3 241 231-528 88-338 (363)
126 KOG1387 Glycosyltransferase [C 99.2 8.1E-09 1.8E-13 111.5 24.5 309 211-561 126-458 (465)
127 COG3769 Predicted hydrolase (H 99.1 4.5E-10 9.9E-15 114.3 13.4 190 590-812 6-230 (274)
128 TIGR03713 acc_sec_asp1 accesso 99.0 4E-08 8.6E-13 116.8 24.3 275 214-549 203-509 (519)
129 PRK09814 beta-1,6-galactofuran 99.0 5.4E-08 1.2E-12 109.9 23.8 239 225-544 58-314 (333)
130 PF13692 Glyco_trans_1_4: Glyc 99.0 2E-09 4.3E-14 104.4 10.2 130 363-527 2-135 (135)
131 PRK00025 lpxB lipid-A-disaccha 99.0 4.6E-08 9.9E-13 112.0 22.2 151 355-539 175-352 (380)
132 PF05693 Glycogen_syn: Glycoge 98.9 4.8E-07 1E-11 106.0 27.3 306 234-562 146-582 (633)
133 cd04299 GT1_Glycogen_Phosphory 98.9 1.1E-06 2.3E-11 108.2 30.6 181 365-560 480-688 (778)
134 TIGR00215 lpxB lipid-A-disacch 98.5 1.3E-05 2.9E-10 92.4 22.8 135 362-528 190-348 (385)
135 cd01427 HAD_like Haloacid deha 98.4 5.2E-07 1.1E-11 86.2 8.1 62 593-661 1-62 (139)
136 PF13524 Glyco_trans_1_2: Glyc 98.4 1E-06 2.2E-11 80.1 9.3 88 462-556 1-91 (92)
137 PF03332 PMM: Eukaryotic phosp 98.4 1.4E-06 3E-11 90.7 11.0 172 627-810 1-198 (220)
138 KOG3189 Phosphomannomutase [Li 98.3 1.2E-05 2.6E-10 81.2 14.4 187 585-798 5-214 (252)
139 COG1519 KdtA 3-deoxy-D-manno-o 98.3 0.00023 5E-09 80.7 25.6 304 215-546 32-404 (419)
140 TIGR02919 accessory Sec system 98.2 0.00022 4.7E-09 83.4 23.5 121 379-529 291-413 (438)
141 smart00775 LNS2 LNS2 domain. T 98.1 5.4E-06 1.2E-10 83.5 6.6 77 593-673 1-88 (157)
142 TIGR01670 YrbI-phosphatas 3-de 98.1 1.7E-05 3.7E-10 79.6 10.0 38 768-812 76-113 (154)
143 PRK09484 3-deoxy-D-manno-octul 98.0 1.2E-05 2.6E-10 83.1 7.5 37 769-812 97-133 (183)
144 TIGR01689 EcbF-BcbF capsule bi 97.9 2.7E-05 5.9E-10 75.2 6.5 53 592-653 2-54 (126)
145 TIGR01684 viral_ppase viral ph 97.6 0.00013 2.7E-09 79.7 7.6 72 589-673 124-200 (301)
146 PRK11133 serB phosphoserine ph 97.6 1.8E-05 3.9E-10 88.8 0.9 40 766-812 246-285 (322)
147 COG0560 SerB Phosphoserine pho 97.4 0.00081 1.8E-08 71.2 10.7 47 759-812 135-181 (212)
148 PLN02954 phosphoserine phospha 97.3 0.0035 7.7E-08 66.4 14.4 36 765-809 152-187 (224)
149 TIGR02726 phenyl_P_delta pheny 97.3 0.0011 2.3E-08 67.7 8.8 38 768-812 82-119 (169)
150 PHA03398 viral phosphatase sup 97.1 0.00097 2.1E-08 73.0 7.4 71 590-673 127-202 (303)
151 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.0016 3.4E-08 63.3 4.8 64 592-662 1-72 (132)
152 TIGR00338 serB phosphoserine p 96.8 0.01 2.2E-07 62.6 11.4 38 768-812 152-189 (219)
153 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.4 0.0045 9.8E-08 67.2 5.7 64 592-671 2-73 (249)
154 KOG2941 Beta-1,4-mannosyltrans 96.4 0.19 4.1E-06 55.8 17.7 137 363-526 255-404 (444)
155 TIGR01681 HAD-SF-IIIC HAD-supe 96.3 0.006 1.3E-07 59.2 5.6 65 592-659 1-66 (128)
156 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.3 0.0034 7.5E-08 68.4 3.9 51 592-654 2-52 (257)
157 PF08323 Glyco_transf_5: Starc 96.3 0.017 3.6E-07 62.7 9.1 96 209-304 111-232 (245)
158 PRK10444 UMP phosphatase; Prov 96.2 0.0044 9.6E-08 67.3 4.1 54 591-660 1-54 (248)
159 TIGR01672 AphA HAD superfamily 96.1 0.014 3E-07 62.9 7.6 83 577-660 49-155 (237)
160 PLN02645 phosphoglycolate phos 96.0 0.0054 1.2E-07 68.8 4.0 54 590-659 27-80 (311)
161 PRK13223 phosphoglycolate phos 96.0 0.041 8.8E-07 60.6 10.8 41 764-811 154-194 (272)
162 TIGR01452 PGP_euk phosphoglyco 95.9 0.0065 1.4E-07 67.0 4.1 49 591-655 2-50 (279)
163 KOG1050 Trehalose-6-phosphate 95.7 0.00051 1.1E-08 84.1 -6.3 221 575-813 173-425 (732)
164 COG0763 LpxB Lipid A disacchar 95.6 0.69 1.5E-05 52.6 18.5 257 230-553 84-372 (381)
165 PF13439 Glyco_transf_4: Glyco 95.5 0.027 5.9E-07 55.9 6.4 92 231-341 80-177 (177)
166 COG1778 Low specificity phosph 95.5 0.02 4.4E-07 56.7 5.1 69 589-662 6-74 (170)
167 COG2179 Predicted hydrolase of 95.4 0.054 1.2E-06 54.4 7.9 68 585-666 22-89 (175)
168 PF02684 LpxB: Lipid-A-disacch 95.4 1.3 2.7E-05 51.1 20.2 235 230-530 81-343 (373)
169 TIGR01664 DNA-3'-Pase DNA 3'-p 95.4 0.023 5E-07 57.8 5.5 56 590-650 12-69 (166)
170 TIGR00213 GmhB_yaeD D,D-heptos 95.3 0.018 3.8E-07 59.0 4.2 51 592-649 2-52 (176)
171 TIGR01668 YqeG_hyp_ppase HAD s 95.1 0.069 1.5E-06 54.5 7.9 61 588-662 22-83 (170)
172 TIGR01656 Histidinol-ppas hist 95.0 0.034 7.3E-07 55.2 5.2 53 592-649 1-53 (147)
173 PRK11009 aphA acid phosphatase 94.9 0.065 1.4E-06 57.7 7.5 71 577-649 49-140 (237)
174 TIGR03568 NeuC_NnaA UDP-N-acet 94.8 3.3 7.2E-05 47.6 21.5 72 441-526 264-338 (365)
175 COG0546 Gph Predicted phosphat 94.7 0.1 2.3E-06 55.4 8.3 35 770-811 148-182 (220)
176 PF07429 Glyco_transf_56: 4-al 94.5 3.2 7E-05 46.8 19.2 168 326-527 160-333 (360)
177 TIGR01261 hisB_Nterm histidino 94.2 0.068 1.5E-06 54.1 5.3 53 592-648 2-54 (161)
178 PF13579 Glyco_trans_4_4: Glyc 94.1 0.076 1.7E-06 51.6 5.2 84 230-334 72-160 (160)
179 PF13844 Glyco_transf_41: Glyc 94.0 1.4 3E-05 52.1 16.0 203 330-561 247-466 (468)
180 PF08645 PNK3P: Polynucleotide 93.9 0.058 1.2E-06 54.6 4.0 53 592-647 1-53 (159)
181 PRK08942 D,D-heptose 1,7-bisph 93.7 0.1 2.2E-06 53.7 5.5 53 591-649 3-55 (181)
182 PF09419 PGP_phosphatase: Mito 93.7 0.18 3.9E-06 51.4 7.1 65 586-663 36-108 (168)
183 PF13344 Hydrolase_6: Haloacid 93.6 0.068 1.5E-06 49.8 3.6 54 594-663 1-57 (101)
184 PTZ00445 p36-lilke protein; Pr 93.6 0.2 4.3E-06 52.5 7.3 70 578-651 30-103 (219)
185 PHA02530 pseT polynucleotide k 93.6 0.12 2.7E-06 57.3 6.3 67 590-660 157-224 (300)
186 PRK05446 imidazole glycerol-ph 93.2 0.14 3.1E-06 58.3 6.0 55 590-648 1-55 (354)
187 PRK06769 hypothetical protein; 93.2 0.11 2.3E-06 53.3 4.5 53 589-649 2-54 (173)
188 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.1 0.14 3.1E-06 55.1 5.6 56 590-661 7-64 (242)
189 TIGR01525 ATPase-IB_hvy heavy 93.0 0.6 1.3E-05 56.8 11.5 67 584-662 357-424 (556)
190 PF12710 HAD: haloacid dehalog 93.0 0.31 6.7E-06 49.8 7.8 37 625-662 92-128 (192)
191 PF02350 Epimerase_2: UDP-N-ac 92.9 21 0.00045 40.8 23.8 243 231-527 67-318 (346)
192 TIGR01675 plant-AP plant acid 92.4 0.14 3E-06 54.8 4.3 70 590-660 76-160 (229)
193 TIGR01663 PNK-3'Pase polynucle 92.4 0.22 4.7E-06 59.7 6.4 58 589-650 166-224 (526)
194 TIGR01460 HAD-SF-IIA Haloacid 92.3 0.18 4E-06 54.2 5.2 50 594-659 1-53 (236)
195 PRK10826 2-deoxyglucose-6-phos 92.3 0.16 3.6E-06 53.7 4.8 38 768-812 149-186 (222)
196 TIGR01533 lipo_e_P4 5'-nucleot 92.1 0.17 3.6E-06 55.5 4.5 73 589-662 73-160 (266)
197 cd03784 GT1_Gtf_like This fami 91.9 14 0.0003 42.5 20.5 72 444-526 292-371 (401)
198 smart00577 CPDc catalytic doma 91.8 0.35 7.5E-06 48.1 6.1 70 590-661 1-82 (148)
199 PF06437 ISN1: IMP-specific 5' 91.7 6.8 0.00015 44.6 16.5 195 578-798 134-377 (408)
200 PRK13225 phosphoglycolate phos 91.6 0.33 7.2E-06 53.5 6.3 35 770-811 198-232 (273)
201 PRK09552 mtnX 2-hydroxy-3-keto 91.5 0.16 3.6E-06 53.7 3.6 38 621-659 73-110 (219)
202 TIGR01488 HAD-SF-IB Haloacid D 91.4 0.13 2.8E-06 52.0 2.6 41 763-810 137-177 (177)
203 PRK13582 thrH phosphoserine ph 91.2 0.35 7.6E-06 50.3 5.7 36 623-660 69-104 (205)
204 PRK13288 pyrophosphatase PpaX; 91.1 0.32 7E-06 51.1 5.3 37 769-812 140-176 (214)
205 TIGR03492 conserved hypothetic 91.0 6.6 0.00014 45.7 16.5 137 366-528 210-365 (396)
206 TIGR01685 MDP-1 magnesium-depe 91.0 0.52 1.1E-05 48.4 6.5 70 591-661 2-84 (174)
207 COG1778 Low specificity phosph 90.6 0.16 3.4E-06 50.5 2.2 39 767-812 82-120 (170)
208 TIGR01512 ATPase-IB2_Cd heavy 90.5 1.2 2.6E-05 54.0 10.1 63 588-662 339-402 (536)
209 COG0707 MurG UDP-N-acetylgluco 90.4 22 0.00048 40.9 19.7 93 451-553 244-349 (357)
210 PLN03243 haloacid dehalogenase 89.8 0.81 1.7E-05 50.1 7.2 19 588-606 21-39 (260)
211 PF03767 Acid_phosphat_B: HAD 89.7 0.04 8.6E-07 59.1 -3.0 85 589-674 70-167 (229)
212 TIGR01488 HAD-SF-IB Haloacid D 89.7 0.54 1.2E-05 47.5 5.4 40 622-662 73-112 (177)
213 PRK14988 GMP/IMP nucleotidase; 88.9 0.52 1.1E-05 50.3 4.8 29 770-805 152-180 (224)
214 PRK01021 lpxB lipid-A-disaccha 88.7 31 0.00068 42.1 19.8 65 454-528 483-572 (608)
215 TIGR01680 Veg_Stor_Prot vegeta 88.3 0.7 1.5E-05 50.5 5.3 63 590-653 100-175 (275)
216 PF08235 LNS2: LNS2 (Lipin/Ned 88.3 0.67 1.5E-05 46.6 4.8 56 593-653 1-57 (157)
217 PRK10671 copA copper exporting 88.0 3 6.4E-05 53.4 11.6 69 581-661 620-688 (834)
218 PF12689 Acid_PPase: Acid Phos 88.0 3 6.5E-05 42.7 9.3 78 715-805 61-139 (169)
219 TIGR03333 salvage_mtnX 2-hydro 86.5 0.74 1.6E-05 48.6 4.2 39 621-660 69-107 (214)
220 TIGR01686 FkbH FkbH-like domai 86.3 1.6 3.5E-05 49.2 7.0 63 591-659 3-67 (320)
221 COG0637 Predicted phosphatase/ 86.3 1.3 2.9E-05 47.1 6.0 40 621-661 85-124 (221)
222 TIGR01489 DKMTPPase-SF 2,3-dik 86.2 1 2.2E-05 45.9 4.8 38 764-811 145-182 (188)
223 TIGR01426 MGT glycosyltransfer 85.0 17 0.00037 41.9 14.8 99 444-555 279-386 (392)
224 COG0241 HisB Histidinol phosph 85.0 0.94 2E-05 46.7 3.9 51 591-648 5-56 (181)
225 PRK02797 4-alpha-L-fucosyltran 84.8 16 0.00035 40.8 13.5 124 364-509 146-272 (322)
226 PLN02575 haloacid dehalogenase 84.2 1.4 3.1E-05 50.8 5.3 18 589-606 129-146 (381)
227 TIGR01456 CECR5 HAD-superfamil 84.0 1.9 4.1E-05 48.7 6.1 50 593-657 2-57 (321)
228 PF03031 NIF: NLI interacting 83.9 1.1 2.3E-05 44.9 3.7 67 592-660 1-72 (159)
229 TIGR01491 HAD-SF-IB-PSPlk HAD- 83.5 0.99 2.1E-05 46.5 3.4 39 767-812 146-184 (201)
230 TIGR02137 HSK-PSP phosphoserin 83.4 1.6 3.5E-05 45.9 5.0 39 622-662 68-106 (203)
231 COG0647 NagD Predicted sugar p 82.7 1.4 3.1E-05 48.4 4.3 54 590-659 7-63 (269)
232 TIGR02250 FCP1_euk FCP1-like p 82.6 2.6 5.6E-05 42.5 5.8 72 588-661 3-95 (156)
233 PRK14089 ipid-A-disaccharide s 82.3 37 0.00079 38.9 15.6 51 211-262 57-109 (347)
234 TIGR03590 PseG pseudaminic aci 81.7 9.9 0.00021 42.0 10.6 91 362-483 170-260 (279)
235 PRK08238 hypothetical protein; 81.7 2.9 6.4E-05 49.8 6.8 47 622-669 72-120 (479)
236 PLN02940 riboflavin kinase 80.7 2.2 4.8E-05 49.4 5.2 36 622-658 93-128 (382)
237 PRK13222 phosphoglycolate phos 80.4 3.6 7.7E-05 43.3 6.3 37 769-812 151-187 (226)
238 TIGR01490 HAD-SF-IB-hyp1 HAD-s 80.4 1.6 3.4E-05 45.2 3.6 41 765-812 152-192 (202)
239 PF06941 NT5C: 5' nucleotidase 80.0 2.8 6.1E-05 43.4 5.2 30 621-651 72-101 (191)
240 TIGR02245 HAD_IIID1 HAD-superf 79.7 3.5 7.6E-05 43.1 5.8 62 589-660 19-81 (195)
241 TIGR01522 ATPase-IIA2_Ca golgi 78.9 24 0.00052 45.6 14.2 71 580-662 492-567 (884)
242 COG0381 WecB UDP-N-acetylgluco 78.1 1.4E+02 0.003 34.6 22.5 135 364-529 206-343 (383)
243 PRK13226 phosphoglycolate phos 77.2 5.6 0.00012 42.4 6.7 37 769-812 153-189 (229)
244 TIGR02251 HIF-SF_euk Dullard-l 77.0 4.8 0.0001 40.7 5.8 69 591-661 1-79 (162)
245 PRK13225 phosphoglycolate phos 77.0 5.6 0.00012 43.9 6.7 22 904-925 251-272 (273)
246 COG4641 Uncharacterized protei 76.3 5 0.00011 45.6 6.1 117 441-562 239-362 (373)
247 PRK14986 glycogen phosphorylas 75.7 59 0.0013 41.2 15.5 150 362-519 542-702 (815)
248 PRK10725 fructose-1-P/6-phosph 75.3 1.7 3.6E-05 44.5 1.9 36 769-811 144-179 (188)
249 PRK13288 pyrophosphatase PpaX; 75.0 4.5 9.7E-05 42.4 5.2 19 905-923 195-213 (214)
250 PF06888 Put_Phosphatase: Puta 73.7 6.8 0.00015 42.2 6.1 45 763-811 145-189 (234)
251 PLN02779 haloacid dehalogenase 72.9 2 4.2E-05 47.7 1.8 36 769-811 204-239 (286)
252 TIGR01454 AHBA_synth_RP 3-amin 72.4 7.8 0.00017 40.3 6.2 36 769-811 133-168 (205)
253 PRK11590 hypothetical protein; 72.2 2 4.4E-05 45.2 1.7 38 765-812 160-197 (211)
254 PHA02597 30.2 hypothetical pro 71.9 1.9 4.1E-05 44.6 1.4 33 769-810 132-164 (197)
255 TIGR01449 PGP_bact 2-phosphogl 71.6 6 0.00013 41.2 5.1 37 769-812 143-179 (213)
256 KOG0210 P-type ATPase [Inorgan 71.6 28 0.00061 42.6 10.8 52 762-828 762-813 (1051)
257 PF12000 Glyco_trans_4_3: Gkyc 71.2 14 0.00031 37.9 7.4 49 210-260 42-93 (171)
258 TIGR02009 PGMB-YQAB-SF beta-ph 71.1 2.2 4.8E-05 43.3 1.7 36 769-811 144-179 (185)
259 COG4030 Uncharacterized protei 70.5 8.2 0.00018 40.8 5.5 51 621-673 82-132 (315)
260 PRK11587 putative phosphatase; 70.4 2.5 5.3E-05 44.7 1.8 36 769-811 140-175 (218)
261 TIGR02252 DREG-2 REG-2-like, H 70.3 2.7 5.9E-05 43.6 2.1 35 770-811 163-198 (203)
262 TIGR01548 HAD-SF-IA-hyp1 haloa 70.1 2.1 4.5E-05 44.4 1.2 31 769-806 163-193 (197)
263 PF05152 DUF705: Protein of un 67.9 14 0.0003 40.7 6.8 61 589-661 120-180 (297)
264 PF00702 Hydrolase: haloacid d 67.9 5.1 0.00011 41.4 3.6 33 772-811 183-215 (215)
265 PLN02770 haloacid dehalogenase 67.6 3 6.5E-05 45.1 1.8 17 589-605 20-36 (248)
266 TIGR01544 HAD-SF-IE haloacid d 67.5 19 0.00042 39.8 8.1 41 620-661 119-159 (277)
267 COG4087 Soluble P-type ATPase 67.2 11 0.00024 36.7 5.2 22 789-811 92-113 (152)
268 TIGR01652 ATPase-Plipid phosph 66.7 34 0.00074 45.2 11.5 36 623-659 632-667 (1057)
269 PF00343 Phosphorylase: Carboh 66.5 1.9E+02 0.004 36.4 16.8 149 362-519 443-603 (713)
270 PRK10748 flavin mononucleotide 66.2 3.3 7.2E-05 44.4 1.8 36 769-811 165-201 (238)
271 cd04300 GT1_Glycogen_Phosphory 65.9 1.4E+02 0.003 38.0 15.7 150 362-519 529-689 (797)
272 PRK13478 phosphonoacetaldehyde 65.4 3.3 7.2E-05 45.2 1.6 37 769-811 160-196 (267)
273 PRK13582 thrH phosphoserine ph 65.4 11 0.00024 39.0 5.5 22 790-812 144-165 (205)
274 TIGR02253 CTE7 HAD superfamily 65.2 6.5 0.00014 41.2 3.8 32 591-636 2-33 (221)
275 COG4359 Uncharacterized conser 64.0 12 0.00026 38.6 5.0 39 621-660 72-110 (220)
276 KOG0206 P-type ATPase [General 63.9 38 0.00083 44.4 10.8 64 755-833 768-831 (1151)
277 PRK10563 6-phosphogluconate ph 63.5 4.1 8.9E-05 42.9 1.9 36 769-811 144-179 (221)
278 PF06888 Put_Phosphatase: Puta 63.1 8.2 0.00018 41.6 4.0 38 623-660 72-110 (234)
279 TIGR02254 YjjG/YfnB HAD superf 62.5 3.9 8.5E-05 42.8 1.5 36 769-811 154-191 (224)
280 TIGR01993 Pyr-5-nucltdase pyri 62.0 4.6 9.9E-05 41.3 1.8 34 769-809 143-176 (184)
281 COG0816 Predicted endonuclease 61.4 36 0.00079 33.8 7.9 72 380-461 40-111 (141)
282 PRK13226 phosphoglycolate phos 60.7 4.2 9.2E-05 43.3 1.4 17 905-921 209-225 (229)
283 PRK09449 dUMP phosphatase; Pro 59.8 4.6 0.0001 42.5 1.5 36 770-811 153-189 (224)
284 PRK13478 phosphonoacetaldehyde 59.5 20 0.00044 39.0 6.5 26 904-929 238-263 (267)
285 TIGR01990 bPGM beta-phosphoglu 58.9 4.4 9.4E-05 41.1 1.0 13 593-605 1-13 (185)
286 PRK14985 maltodextrin phosphor 57.9 1.2E+02 0.0025 38.6 13.0 150 362-519 528-688 (798)
287 COG3914 Spy Predicted O-linked 57.8 4E+02 0.0088 32.5 16.8 108 366-495 431-538 (620)
288 TIGR01493 HAD-SF-IA-v2 Haloaci 56.7 5 0.00011 40.5 1.0 30 770-806 142-171 (175)
289 COG0058 GlgP Glucan phosphoryl 55.5 2E+02 0.0044 36.2 14.5 137 362-511 486-630 (750)
290 TIGR03333 salvage_mtnX 2-hydro 54.2 13 0.00028 39.2 3.7 36 766-812 142-177 (214)
291 TIGR01489 DKMTPPase-SF 2,3-dik 53.4 15 0.00032 37.2 3.8 38 623-661 73-110 (188)
292 COG1819 Glycosyl transferases, 53.2 2E+02 0.0043 33.7 13.6 98 445-557 289-396 (406)
293 KOG3742 Glycogen synthase [Car 52.9 9.9 0.00022 43.9 2.6 72 452-527 493-578 (692)
294 TIGR01517 ATPase-IIB_Ca plasma 52.4 88 0.0019 40.8 11.5 40 622-662 579-618 (941)
295 TIGR02247 HAD-1A3-hyp Epoxide 52.2 8 0.00017 40.4 1.7 34 770-810 155-188 (211)
296 KOG3120 Predicted haloacid deh 52.0 27 0.00058 37.1 5.4 46 761-810 156-201 (256)
297 PLN00414 glycosyltransferase f 52.0 2.4E+02 0.0052 33.5 14.1 108 445-562 317-441 (446)
298 TIGR02137 HSK-PSP phosphoserin 51.8 14 0.0003 38.9 3.5 37 765-812 129-165 (203)
299 TIGR02093 P_ylase glycogen/sta 49.5 2E+02 0.0043 36.6 13.2 150 362-519 526-686 (794)
300 PF13242 Hydrolase_like: HAD-h 48.7 23 0.0005 30.6 3.8 34 772-812 9-43 (75)
301 COG3882 FkbH Predicted enzyme 48.4 55 0.0012 38.7 7.6 83 578-661 209-293 (574)
302 KOG2116 Protein involved in pl 45.9 27 0.00058 42.4 4.8 83 589-676 528-615 (738)
303 TIGR01511 ATPase-IB1_Cu copper 45.7 42 0.00091 41.0 6.8 33 768-811 454-486 (562)
304 PF12710 HAD: haloacid dehalog 45.6 11 0.00024 38.3 1.5 33 768-808 157-192 (192)
305 PRK08942 D,D-heptose 1,7-bisph 45.5 53 0.0012 33.4 6.6 35 770-811 106-140 (181)
306 COG4087 Soluble P-type ATPase 45.1 21 0.00046 34.8 3.2 51 594-661 17-67 (152)
307 PRK06769 hypothetical protein; 44.9 32 0.00068 35.1 4.7 35 770-811 96-130 (173)
308 PF13477 Glyco_trans_4_2: Glyc 43.9 37 0.0008 32.4 4.9 39 225-264 69-108 (139)
309 PF11019 DUF2608: Protein of u 43.8 62 0.0013 35.3 7.0 83 578-664 6-123 (252)
310 COG1011 Predicted hydrolase (H 42.7 14 0.00031 38.7 1.9 34 771-810 158-191 (229)
311 PRK09456 ?-D-glucose-1-phospha 40.3 16 0.00034 37.9 1.7 14 592-605 1-14 (199)
312 TIGR01494 ATPase_P-type ATPase 40.2 1.1E+02 0.0025 36.6 9.2 64 586-661 322-385 (499)
313 TIGR01511 ATPase-IB1_Cu copper 40.1 41 0.0009 41.1 5.5 63 588-662 382-444 (562)
314 COG3700 AphA Acid phosphatase 39.8 43 0.00093 34.4 4.5 82 577-659 49-150 (237)
315 PRK10422 lipopolysaccharide co 39.6 4.4E+02 0.0096 29.8 13.6 87 362-467 183-270 (352)
316 TIGR02254 YjjG/YfnB HAD superf 38.1 61 0.0013 33.7 5.8 16 591-606 1-16 (224)
317 PRK04128 1-(5-phosphoribosyl)- 36.9 95 0.0021 33.3 7.0 61 578-658 31-93 (228)
318 PRK09552 mtnX 2-hydroxy-3-keto 36.8 26 0.00056 37.0 2.7 35 767-812 147-181 (219)
319 PF06258 Mito_fiss_Elm1: Mitoc 36.7 6.6E+02 0.014 28.3 17.5 194 231-497 57-259 (311)
320 PRK11033 zntA zinc/cadmium/mer 36.1 68 0.0015 40.7 6.6 68 583-662 540-607 (741)
321 PF13528 Glyco_trans_1_3: Glyc 35.5 2.7E+02 0.0059 30.6 10.8 68 448-523 239-316 (318)
322 TIGR01116 ATPase-IIA1_Ca sarco 34.4 66 0.0014 41.8 6.3 39 623-662 538-576 (917)
323 KOG2134 Polynucleotide kinase 34.3 38 0.00082 38.9 3.5 56 589-647 73-128 (422)
324 PRK05632 phosphate acetyltrans 34.2 3.2E+02 0.007 34.4 12.1 194 445-675 231-434 (684)
325 TIGR01497 kdpB K+-transporting 33.7 68 0.0015 40.1 5.9 72 579-662 414-485 (675)
326 KOG2884 26S proteasome regulat 33.3 4.3E+02 0.0093 28.3 10.6 38 488-525 186-227 (259)
327 COG2248 Predicted hydrolase (m 33.0 4.9E+02 0.011 28.6 11.2 22 222-243 56-77 (304)
328 PRK05282 (alpha)-aspartyl dipe 33.0 3.8E+02 0.0083 28.9 10.8 112 365-500 4-125 (233)
329 TIGR02193 heptsyl_trn_I lipopo 32.8 6.1E+02 0.013 28.0 13.1 24 444-467 239-262 (319)
330 PF13419 HAD_2: Haloacid dehal 32.8 42 0.00091 32.8 3.4 41 621-662 76-116 (176)
331 PF09949 DUF2183: Uncharacteri 32.7 1E+02 0.0022 28.8 5.5 35 379-417 49-83 (100)
332 COG5083 SMP2 Uncharacterized p 32.6 27 0.00058 40.5 2.0 77 589-673 373-451 (580)
333 TIGR00661 MJ1255 conserved hyp 32.0 1.1E+02 0.0024 34.3 6.9 69 451-528 239-315 (321)
334 PHA03392 egt ecdysteroid UDP-g 31.8 4.2E+02 0.009 32.0 12.1 76 444-528 350-433 (507)
335 COG4567 Response regulator con 31.8 96 0.0021 31.3 5.4 76 449-524 41-124 (182)
336 TIGR01491 HAD-SF-IB-PSPlk HAD- 31.5 83 0.0018 32.1 5.4 39 623-662 81-119 (201)
337 PF15024 Glyco_transf_18: Glyc 30.8 1.7E+02 0.0037 35.5 8.2 82 445-528 327-431 (559)
338 PRK09449 dUMP phosphatase; Pro 30.6 1.6E+02 0.0034 30.8 7.5 17 905-921 207-223 (224)
339 PLN03007 UDP-glucosyltransfera 30.2 7.7E+02 0.017 29.5 14.0 73 445-528 350-441 (482)
340 COG4996 Predicted phosphatase 30.2 73 0.0016 31.2 4.2 16 592-607 1-16 (164)
341 TIGR01422 phosphonatase phosph 30.2 1E+02 0.0022 33.1 6.1 37 769-811 158-194 (253)
342 KOG0331 ATP-dependent RNA heli 29.7 2.4E+02 0.0052 34.1 9.2 239 364-670 129-374 (519)
343 TIGR00250 RNAse_H_YqgF RNAse H 29.6 2.2E+02 0.0047 27.8 7.6 71 380-460 35-105 (130)
344 PRK14988 GMP/IMP nucleotidase; 29.5 99 0.0021 32.8 5.7 16 590-605 9-24 (224)
345 TIGR03351 PhnX-like phosphonat 29.3 1.2E+02 0.0025 31.7 6.2 38 769-812 147-184 (220)
346 KOG1618 Predicted phosphatase 29.2 44 0.00096 37.4 2.9 41 591-646 35-78 (389)
347 PF06258 Mito_fiss_Elm1: Mitoc 28.8 8.8E+02 0.019 27.3 13.8 111 361-482 111-228 (311)
348 COG0474 MgtA Cation transport 28.3 2.1E+02 0.0045 37.4 9.2 38 623-661 548-585 (917)
349 TIGR01454 AHBA_synth_RP 3-amin 27.8 71 0.0015 33.0 4.2 40 622-662 75-114 (205)
350 TIGR01662 HAD-SF-IIIA HAD-supe 27.7 66 0.0014 30.7 3.6 37 768-811 86-124 (132)
351 PLN02645 phosphoglycolate phos 27.2 1.5E+02 0.0034 33.1 7.0 36 769-811 232-268 (311)
352 PRK10840 transcriptional regul 27.1 3.3E+02 0.0071 28.1 9.1 78 449-526 37-125 (216)
353 TIGR00213 GmhB_yaeD D,D-heptos 26.9 96 0.0021 31.5 4.9 36 769-811 108-143 (176)
354 PRK06698 bifunctional 5'-methy 26.9 1.4E+02 0.003 35.5 6.9 34 769-811 387-420 (459)
355 PRK12446 undecaprenyldiphospho 26.8 8E+02 0.017 27.9 12.8 70 451-528 244-326 (352)
356 PLN02919 haloacid dehalogenase 26.7 41 0.00089 44.3 2.5 35 590-642 74-108 (1057)
357 TIGR01544 HAD-SF-IE haloacid d 26.6 60 0.0013 36.0 3.4 61 591-652 22-85 (277)
358 TIGR01449 PGP_bact 2-phosphogl 26.6 77 0.0017 32.8 4.2 40 622-662 85-124 (213)
359 TIGR01261 hisB_Nterm histidino 26.5 44 0.00096 33.8 2.2 37 769-812 105-141 (161)
360 KOG1615 Phosphoserine phosphat 26.5 46 0.001 34.8 2.3 39 765-812 156-194 (227)
361 COG3660 Predicted nucleoside-d 26.3 5.8E+02 0.013 28.3 10.5 33 231-263 70-102 (329)
362 COG2159 Predicted metal-depend 25.9 1.2E+02 0.0026 33.9 5.7 129 132-266 94-230 (293)
363 PLN03190 aminophospholipid tra 25.6 50 0.0011 44.0 3.0 37 622-659 726-762 (1178)
364 KOG4549 Magnesium-dependent ph 25.0 1.2E+02 0.0025 29.7 4.5 63 592-660 19-82 (144)
365 PRK00109 Holliday junction res 24.5 3E+02 0.0065 27.1 7.6 70 381-460 42-111 (138)
366 KOG2882 p-Nitrophenyl phosphat 24.3 89 0.0019 34.8 4.2 55 590-660 21-75 (306)
367 cd04248 AAK_AK-Ectoine AAK_AK- 24.0 3.6E+02 0.0077 30.4 8.8 51 582-648 148-198 (304)
368 PF12038 DUF3524: Domain of un 23.7 61 0.0013 33.1 2.6 30 282-311 114-143 (168)
369 PRK01122 potassium-transportin 23.7 1.4E+02 0.003 37.5 6.2 72 579-662 413-484 (679)
370 PF10933 DUF2827: Protein of u 23.4 7.1E+02 0.015 28.7 11.0 147 371-544 198-346 (364)
371 PLN02575 haloacid dehalogenase 23.2 1.6E+02 0.0034 34.2 6.2 36 623-659 217-252 (381)
372 PF13419 HAD_2: Haloacid dehal 23.0 61 0.0013 31.7 2.5 37 768-811 134-170 (176)
373 TIGR01656 Histidinol-ppas hist 22.9 59 0.0013 32.0 2.4 36 768-810 102-137 (147)
374 TIGR01549 HAD-SF-IA-v1 haloaci 22.8 76 0.0017 31.0 3.1 33 769-809 120-152 (154)
375 COG4359 Uncharacterized conser 22.8 60 0.0013 33.7 2.3 35 763-808 142-176 (220)
376 TIGR01548 HAD-SF-IA-hyp1 haloa 22.5 1E+02 0.0022 31.7 4.1 36 626-662 110-145 (197)
377 PRK10826 2-deoxyglucose-6-phos 22.2 1.1E+02 0.0023 32.2 4.3 39 622-661 92-130 (222)
378 TIGR03351 PhnX-like phosphonat 22.0 92 0.002 32.5 3.7 39 622-661 87-125 (220)
379 TIGR01545 YfhB_g-proteo haloac 22.0 1E+02 0.0023 32.4 4.1 38 765-812 159-196 (210)
380 PRK13587 1-(5-phosphoribosyl)- 21.9 2.1E+02 0.0046 30.8 6.5 60 577-658 148-212 (234)
381 COG2503 Predicted secreted aci 21.9 1.2E+02 0.0027 32.8 4.5 60 589-652 77-151 (274)
382 TIGR01106 ATPase-IIC_X-K sodiu 21.7 1.7E+02 0.0036 38.6 6.6 39 622-661 568-606 (997)
383 COG0546 Gph Predicted phosphat 21.6 1.1E+02 0.0024 32.3 4.2 38 623-661 90-127 (220)
384 KOG1615 Phosphoserine phosphat 21.5 1.3E+02 0.0028 31.6 4.4 52 621-673 87-140 (227)
385 PRK12704 phosphodiesterase; Pr 21.5 2.5E+02 0.0055 34.0 7.7 56 469-526 228-296 (520)
386 PF09949 DUF2183: Uncharacteri 21.3 1.5E+02 0.0033 27.6 4.5 37 768-812 50-86 (100)
387 PLN03243 haloacid dehalogenase 20.9 1.8E+02 0.004 31.7 5.9 36 623-659 110-145 (260)
388 TIGR01422 phosphonatase phosph 20.6 1E+02 0.0022 33.2 3.7 38 622-660 99-136 (253)
389 PRK13222 phosphoglycolate phos 20.2 1.3E+02 0.0028 31.4 4.4 40 622-662 93-132 (226)
390 KOG3120 Predicted haloacid deh 20.2 95 0.002 33.2 3.2 19 588-606 10-28 (256)
No 1
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.3e-188 Score=1696.37 Aligned_cols=926 Identities=82% Similarity=1.275 Sum_probs=857.1
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccchhhhhcccCCCCCCcccccCCCCCC--
Q 002314 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (937)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (937)
||||+|+|++...+++|++||+|+ ||||+.++++...++.+ +.+.++.|+++...|..+.++..+++..+|.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999977888999999999 99999999998666666 788899999999999999999999999998733
Q ss_pred CCCCCCccCCCCCCCCCcEEEEEcCCccceEecCCCcEEEEecCCcHHHhccccccCCcEEEEeCCCCCCCchhhHHHHH
Q 002314 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK 157 (937)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~ 157 (937)
...++|.+++++..-++||||||||||+.++++++|.|++++++|||+++|.+++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 35678888888665589999999999999988778999999999999999999977899999999988776656666777
Q ss_pred hhcCceEEEEecChhhhhhhhhhhhhhccccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCEEEE
Q 002314 158 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237 (937)
Q Consensus 158 ~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwv 237 (937)
.+.+|+|+||||+++++++||+||||++|||+|||++.++.++....+.++..|++|++||++||++|++++++||+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 88999999999999999999999999999999999865554433333334467999999999999999999999999999
Q ss_pred eCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC
Q 002314 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 317 (937)
Q Consensus 238 HDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~ 317 (937)
||||||+||.+||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||.++||++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccC
Q 002314 318 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 397 (937)
Q Consensus 318 ~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~ 397 (937)
+++++||.++|.++|+|||++.|...+..++++++++.++++++++++||+|||||+.|||.++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHH
Q 002314 398 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477 (937)
Q Consensus 398 ~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~ 477 (937)
+|+||||+.|+|+++++|++|+.++.++|++||++||+.+|.||+|+.+.+++++|.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHH
Q 002314 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (937)
Q Consensus 478 EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~ 557 (937)
||||||.+++|+||+|||+|++++|+.+|++|||||++++|+||.+||+|+++||++|+++++++|.+||+++|+++||.
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999999999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhccccCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcC
Q 002314 558 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 637 (937)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d 637 (937)
+|+++..+...+..++.+.|+.+.++++|+.++++||||||||||++++++|.++.+++.+..+.++++++++|++|+++
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998776666666677899999999999999999999999999999999996556666666788999999999999999
Q ss_pred CCCeEEEEcCCChhhHHHHhcccCceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecce
Q 002314 638 PKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717 (937)
Q Consensus 638 ~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~s 717 (937)
++++|+|+|||++++|++||+.++++++|+||++++..++.|...+++..+.+|++.+..+|++|++++||++||.|+++
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~S 717 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcE
Confidence 99999999999999999999999999999999999987888975444556779999999999999999999999999999
Q ss_pred EEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEe
Q 002314 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (937)
Q Consensus 718 l~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iG 797 (937)
++||||.+||+++..|++++.+++++..+.+.+++|+.|+++|||+|.|+|||.|+++||+++..+.....++|||+|||
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~G 797 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIG 797 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeC
Confidence 99999999999999999999999855555566899999999999999999999999999998742211123689999999
Q ss_pred cCCCC-cHHHHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhh-hccCCcccccCCCCCCCCCCCCCCCCCC--CCC
Q 002314 798 HFLGK-DEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKV-ASRGSSKISQGKTQRPAQAPEKKTPNHN--CTN 873 (937)
Q Consensus 798 D~d~n-DEdMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 873 (937)
| |.+ |||||+++...++..+.+++|++..++.+++.+++|..+. .+++++++++.++|++.++..+...+|+ .++
T Consensus 798 D-d~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (934)
T PLN03064 798 H-FLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGS 876 (934)
T ss_pred C-CCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccccccccccccccCCc
Confidence 9 875 9999999999999999999999999999999999998776 7788999999999999999999998884 667
Q ss_pred CCCCCCCCCccccccCCCCCeEEEEECCCCCccceeeCCHHHHHHHHHHhhhccCcc
Q 002314 874 VRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSSH 930 (937)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~~La~~~~~~ 930 (937)
.+..+.+.++|+++|++++|||||+||+|+|+|+|+|++++||+.||+.||+.+..+
T Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (934)
T PLN03064 877 DRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSSF 933 (934)
T ss_pred cccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccCC
Confidence 777889999999999999999999999999999999999999999999999887653
No 2
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.5e-158 Score=1446.15 Aligned_cols=746 Identities=36% Similarity=0.673 Sum_probs=669.6
Q ss_pred CCcEEEEEcCCccceEecCC--CcEEEEecCCcHHHhcccc-c--cCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 002314 93 RQRLLVVANRLPVSAIRRGE--DSWSLEISAGGLVSALLGV-K--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (937)
Q Consensus 93 ~~~livvsnrlP~~~~~~~~--~~~~~~~~~ggl~~~l~~~-~--~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (937)
..||||||||||+.++++++ +.|.+++++|||+++|.++ . ..+++||||+|..++.+++......++++|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 57999999999999998643 6899999999999999976 3 47899999999877765444444666788999999
Q ss_pred ecChhhhhhhhhhhhhhccccccCCCC-CCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCC-CCEEEEeCcccch
Q 002314 168 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 244 (937)
Q Consensus 168 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~-~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~-~DvVwvHDyhl~l 244 (937)
||+++++++||+||||++|||+|||+. ..+. ....|+ ..|++|++||++||++|++++++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999993 3321 112577 56999999999999999999998 6999999999999
Q ss_pred HHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC----Ccee
Q 002314 245 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 320 (937)
Q Consensus 245 lp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~----~~v~ 320 (937)
||.+||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|+||+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754 3578
Q ss_pred eCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc--CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCc
Q 002314 321 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 398 (937)
Q Consensus 321 ~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~ 398 (937)
|+||.++|.++|+|||++.|...+..+++.+.+++++++++ ++++||+|||||+.|||.++|+||++||++||+|++|
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999988999999999999996 6899999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHH
Q 002314 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (937)
Q Consensus 399 v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~E 478 (937)
|+||||+.|+|+++++|++++.+|+++|++||++||+.+|.||+|+.+.++++|+.|||++|||+++||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC---------------CCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh
Q 002314 479 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (937)
Q Consensus 479 amAc~~~---------------~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V 543 (937)
|+|||.+ ++|+||+|||+||+++| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999963 58999999999999999 7899999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHhHHHhh-hc---------cc-----cCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCC
Q 002314 544 TTHTAQEWAETFVSELNDTVVEAQ-LR---------IK-----QVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 608 (937)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~~~~~~~-~~---------~~-----~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~ 608 (937)
.+||+.+|+++||.+|+.+++.+. .+ ++ .-+++|+++.++++|+++++|+|||||||||++...
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999865431 11 11 115789999999999999999999999999998753
Q ss_pred CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc-CceEEeeCceEEEecCC-eeeeccccc
Q 002314 609 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEH 686 (937)
Q Consensus 609 P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~l~liaenG~~ir~~~~-~w~~~~~~~ 686 (937)
....++++++++|++|++++++.|+|+|||++..|+++|+.+ ++++||+||++++..++ .|.... ..
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~ 681 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PV 681 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hh
Confidence 245688999999999999999999999999999999999987 69999999999996554 786543 33
Q ss_pred cChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECC
Q 002314 687 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 766 (937)
Q Consensus 687 ~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~g 766 (937)
.+..|++.+..+++.|++++||+++|.|+++++||||.+||+++..+++++..++ +..+.+.++.+..|+++|||+|++
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCC
Confidence 4668999999999999999999999999999999999999999888889999888 666666678899999999999999
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccC
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRG 846 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (937)
+|||.|+++|++.+.. ..+++++++|||| |.|||+||++++......
T Consensus 761 vnKG~Al~~Ll~~~~~---~g~~~d~vl~~GD-D~nDedMF~~~~~~~~g~----------------------------- 807 (854)
T PLN02205 761 VSKGLVAKRLLSIMQE---RGMLPDFVLCIGD-DRSDEDMFEVITSSMAGP----------------------------- 807 (854)
T ss_pred CCHHHHHHHHHHHHHh---cCCCcccEEEEcC-CccHHHHHHHhhhhccCC-----------------------------
Confidence 9999999999876421 0146799999999 999999999996410000
Q ss_pred CcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEEEEECCCCCccceeeCCHHHHHHHHHHhhhc
Q 002314 847 SSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADA 926 (937)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~~La~~ 926 (937)
. + ....++|||+||.++|+|+|||+|++||.+||+.|++.
T Consensus 808 ---------------------------~------------~-~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~ 847 (854)
T PLN02205 808 ---------------------------S------------I-APRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASV 847 (854)
T ss_pred ---------------------------c------------c-cccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhc
Confidence 0 0 01146899999999999999999999999999999987
Q ss_pred cCc
Q 002314 927 SSS 929 (937)
Q Consensus 927 ~~~ 929 (937)
+.+
T Consensus 848 ~~~ 850 (854)
T PLN02205 848 SEQ 850 (854)
T ss_pred chh
Confidence 654
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5.6e-157 Score=1434.06 Aligned_cols=784 Identities=71% Similarity=1.179 Sum_probs=687.5
Q ss_pred CCCCCCCCcEEEEEcCCccceEecCCCcEEEEecCCcHHHhccccccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEE
Q 002314 87 DGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIP 166 (937)
Q Consensus 87 ~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~p 166 (937)
+.|+. ++||||||||||+.+.++++|.|++++++|||+++|.+++..+++||||+|..+++++++..+...+.+++|+|
T Consensus 5 ~~~~~-~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~p 83 (797)
T PLN03063 5 DARGE-RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIP 83 (797)
T ss_pred cCccC-CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEE
Confidence 44443 78999999999999888777999999999999999999966699999999987665545556677788999999
Q ss_pred EecChhhhhhhhhhhhhhccccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHH
Q 002314 167 VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (937)
Q Consensus 167 V~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp 246 (937)
||| ++++++||+||||++|||+|||++.++.+.....+.++..|++|++||++||++|++++++||+|||||||||+||
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp 162 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLP 162 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHH
Confidence 999 9999999999999999999999843332222222334567999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeee
Q 002314 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLT 326 (937)
Q Consensus 247 ~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~ 326 (937)
++||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+++++++....++.++|+.+
T Consensus 163 ~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~ 242 (797)
T PLN03063 163 QYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVT 242 (797)
T ss_pred HHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988778899999999
Q ss_pred EEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEc
Q 002314 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (937)
Q Consensus 327 ~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~ 406 (937)
+|.++|+|||++.|.+....+++++....++++++++++||+|||||+.||+.++|+||++|++++|+++++++||||++
T Consensus 243 ~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~ 322 (797)
T PLN03063 243 RVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAV 322 (797)
T ss_pred EEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEec
Confidence 99999999999999887766777777888888899999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCC
Q 002314 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (937)
Q Consensus 407 p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~ 486 (937)
|+++++++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+..+
T Consensus 323 psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~ 402 (797)
T PLN03063 323 PTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK 402 (797)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHHh
Q 002314 487 KGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEA 566 (937)
Q Consensus 487 ~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~ 566 (937)
+|++|+|||+|+++++|.+|++|||||++++|+||.++|+|+++||++|+++++++|.+||+.+|++.||.+|.++....
T Consensus 403 ~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~ 482 (797)
T PLN03063 403 KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEA 482 (797)
T ss_pred CCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhh
Confidence 89999999999999997799999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhccccCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc
Q 002314 567 QLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (937)
Q Consensus 567 ~~~~~~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS 646 (937)
.......++.|+.+.++++|+++++++|||||||||++..++|. ..+++.++++++++|++|+++++|.|+|+|
T Consensus 483 ~~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS 556 (797)
T PLN03063 483 ELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI------KEMDLGLHPELKETLKALCSDPKTTVVVLS 556 (797)
T ss_pred hhcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc------ccccCCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 55555566889999999999999999999999999998865331 004578999999999999999999999999
Q ss_pred CCChhhHHHHhcccCceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccC
Q 002314 647 GSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYAD 726 (937)
Q Consensus 647 GR~~~~L~~~~~~~~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad 726 (937)
||++++|++||+.++++++|+||++++..++.|...++...+.+|++.+..+|++|++++||++||.|+++++||||.+|
T Consensus 557 GR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~ad 636 (797)
T PLN03063 557 RSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYAD 636 (797)
T ss_pred CCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCC
Confidence 99999999999998999999999999977788976543445778999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHH
Q 002314 727 VEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDED 805 (937)
Q Consensus 727 ~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEd 805 (937)
|+++..++.++..++.+..+.+.+++|+.||++|||+|.++|||.|+++||+++........++|||+|+|| |. +||+
T Consensus 637 p~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEd 715 (797)
T PLN03063 637 VEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDED 715 (797)
T ss_pred hHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHH
Confidence 999988999999988444445567999999999999999999999999999987310001125799999999 75 6999
Q ss_pred HHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 002314 806 VYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYN 885 (937)
Q Consensus 806 Mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (937)
||+++.....+. . .+.+...+++ + ++...+.
T Consensus 716 mF~~l~~~~~~~-----~---------------------~~~~~~~~~~--------~---------------~~~~~~~ 746 (797)
T PLN03063 716 VYTFFEPEILSK-----K---------------------KSSSSNYSDS--------D---------------KKVSSNL 746 (797)
T ss_pred HHHhcccccccc-----c---------------------cccccccccc--------c---------------ccccccc
Confidence 999997510000 0 0000000000 0 0000111
Q ss_pred cccCCCCCeEEEEECCCCCccceeeCCHHHHHHHHHHhhhccCc
Q 002314 886 VLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 929 (937)
Q Consensus 886 ~~~~~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~~La~~~~~ 929 (937)
...+..+.|+|+||.++|.|+|||+|++||.++|+.|++..+.
T Consensus 747 -~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 747 -VDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred -cccccCceEEEEECCCCccCeecCCCHHHHHHHHHHHhccCcc
Confidence 1123357999999999999999999999999999999986543
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=2.8e-142 Score=1306.94 Aligned_cols=721 Identities=42% Similarity=0.750 Sum_probs=663.4
Q ss_pred CcEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCc--hhhHHHHHhhcCceEEEEecC
Q 002314 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 170 (937)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~ 170 (937)
+||||||||||+.+.+++ |.|++++++|||+++|.++ +..+++||||+|...+.+ .++..++..+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~~-~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED-GGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeecC-CceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 489999999999988754 5899999999999999998 778999999999876542 222334567789999999999
Q ss_pred hhhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHH
Q 002314 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (937)
Q Consensus 171 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~L 249 (937)
+++++.||+||||++|||+|||++... .|+ .+|++|++||++||++|++.++++|+|||||||||+||.+|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999995332 477 56999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEE
Q 002314 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 329 (937)
Q Consensus 250 r~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~ 329 (937)
|++.|+++||||||+|||++++|+++|+|++||+|||+||+||||+++|++||+++|.++++++.....++++|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCC
Q 002314 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (937)
Q Consensus 330 v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r 409 (937)
++|+|||++.|.+....+++.+..+.+|+.++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|++
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999988777777777888888888999999999999999999999999999999999999999999999998
Q ss_pred CChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCce
Q 002314 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (937)
Q Consensus 410 ~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~ 489 (937)
.+.++|+++++++++++++||++||+.+|.||+|+.+.+++++++++|++|||||+||++||||||++|||||+.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred EEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHHhhhc
Q 002314 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 569 (937)
Q Consensus 490 lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~~~~ 569 (937)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|+.+|+++|+++++++|.+||+.+|+++|+..+.++...+...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999987654322
Q ss_pred cccCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 570 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 570 ~~~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
.....+.|+++.++++|+.+++|||+|||||||++...+| ....++++++++|++|++++|+.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 2333577899999999999999999999999999987666 4567899999999999998999999999999
Q ss_pred hhhHHHHhcccCceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhh
Q 002314 650 RNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 729 (937)
Q Consensus 650 ~~~L~~~~~~~~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~ 729 (937)
+..++++|+.+++++||+||++++..++.|.... ..+..|++.+.++++.+.+++||+++|.|+.+++|||+.+|+++
T Consensus 542 ~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 542 RDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred HHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999999998899999999999997777887543 24678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHh
Q 002314 730 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 809 (937)
Q Consensus 730 ~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~ 809 (937)
+..++.++..++ ...+.+.++.++.|+.++||+|+++|||.|+++|++. .++++++|||| |.|||+||++
T Consensus 620 ~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~ 689 (726)
T PRK14501 620 GEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRA 689 (726)
T ss_pred HHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHh
Confidence 888888888888 6666667788899999999999999999999999983 35799999999 9999999998
Q ss_pred cCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 002314 810 FEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDL 889 (937)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (937)
+..
T Consensus 690 ~~~----------------------------------------------------------------------------- 692 (726)
T PRK14501 690 LPE----------------------------------------------------------------------------- 692 (726)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 742
Q ss_pred CCCCeEEEEECCCCCccceeeCCHHHHHHHHHHhhh
Q 002314 890 NKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLAD 925 (937)
Q Consensus 890 ~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~~La~ 925 (937)
.+++|+||.++|.|+|+|+++++|..+|+.|+.
T Consensus 693 ---~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 693 ---TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred ---CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 378999999999999999999999999999874
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-121 Score=1083.84 Aligned_cols=722 Identities=46% Similarity=0.812 Sum_probs=667.5
Q ss_pred CCcEEEEEcCCccceE-ecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecC
Q 002314 93 RQRLLVVANRLPVSAI-RRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 170 (937)
Q Consensus 93 ~~~livvsnrlP~~~~-~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 170 (937)
+.|+|+|||+||+.+. +.+++.|.+++++|||++++.++ +..+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 5789999999999984 45588999999999999999987 788899999999888887777777888899999999999
Q ss_pred hhhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHH
Q 002314 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (937)
Q Consensus 171 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~L 249 (937)
++...++|++|||++|||+|||...+..... . .|+ ..|++|+.+|++||++|++.++++|+|||||||||++|.++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~--~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPAF--K-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchhh--h-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 9999999999999999999999933331211 1 344 56999999999999999999999999999999999999999
Q ss_pred HhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccC----CCceeeCCee
Q 002314 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 325 (937)
Q Consensus 250 r~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~----~~~v~~~gr~ 325 (937)
|+...+++||||+|.|||++|+|+|+|.|++|+.+|+++|+||||+++|+|||+++|.|+++++.. ..++.++||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568999999
Q ss_pred eEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEE
Q 002314 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (937)
Q Consensus 326 ~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~ 405 (937)
+.|.++|+|||+.+|......+.+..+..+++..++++++|++|||+|+.||+.+++.||++|+++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999988888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCC
Q 002314 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (937)
Q Consensus 406 ~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~ 485 (937)
.|+++++++|++++.++..++.+||++||+..+.||+++...++..++.++|.+||+++++|++|||||+++||++|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHH
Q 002314 486 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (937)
Q Consensus 486 ~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~ 565 (937)
+.+++|+|+|+|+.+.++.++++|||||.++++.+|..+|+|+.+|+..|+...+.++..|+...|+..|+..+.+.+..
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999988888877
Q ss_pred hhhccccCCCCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEE
Q 002314 566 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 645 (937)
Q Consensus 566 ~~~~~~~~~~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~Iv 645 (937)
..+. ..+.+.|..+.++..|+++++|+|+||||||+++.. | ..+...|+.||.||+|.|+|+
T Consensus 479 ~~~~-~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~--~---------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GFLG-FRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPR--S---------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cccc-cccccccChhHhhhhhhhccceEEEecccccccCCC--C---------------chHHHHHHHHhcCCCCeEEEE
Confidence 6533 334466899999999999999999999998887653 2 118999999999999999999
Q ss_pred cCCChhhHHHHhccc-CceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeec
Q 002314 646 SGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY 724 (937)
Q Consensus 646 SGR~~~~L~~~~~~~-~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ 724 (937)
|||++..++.|+... ++|++||||+++|.+++ |.+.+ .+.+|++.+++++++|++||||+++|.|+++++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998777 89999999999998666 98765 68899999999999999999999999999999999999
Q ss_pred cChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcH
Q 002314 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDE 804 (937)
Q Consensus 725 ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDE 804 (937)
+|++++..||+++.++| +. .+.+++|+.|+..|||+|.|++||.|+..++..+. .++|+++|+|| |.+||
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 54 67789999999999999999999999999999876 46899999999 99999
Q ss_pred HHHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 002314 805 DVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSY 884 (937)
Q Consensus 805 dMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (937)
+||+++.....+.
T Consensus 687 d~~~~~~~~~~~~------------------------------------------------------------------- 699 (732)
T KOG1050|consen 687 DMFEFISKAKDPE------------------------------------------------------------------- 699 (732)
T ss_pred HHHHHHhhccCCc-------------------------------------------------------------------
Confidence 9999997621100
Q ss_pred ccccCCCCCeEEEEECCCCCccceeeCCHHHHHHHHH
Q 002314 885 NVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLK 921 (937)
Q Consensus 885 ~~~~~~~~~~~~~~VG~~~t~A~y~l~~~~~V~~~L~ 921 (937)
+..+.|+|+||.++|.|+|++.++.||..+|+
T Consensus 700 -----~~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 700 -----KVEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred -----ccceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 00368999999999999999999999999885
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=6.5e-115 Score=991.59 Aligned_cols=450 Identities=36% Similarity=0.633 Sum_probs=417.3
Q ss_pred CcEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhh-cCceEEEEecCh
Q 002314 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDE 171 (937)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~-~~~~~~pV~l~~ 171 (937)
+||||||||+|+.. + . +.++|||++||.++ +..+|+||||+|....+ . . .+.... .++.|.||+|++
T Consensus 2 ~rLivVSNRlp~~~---~--~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~-~-~-~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPD---E--H---KASAGGLAVGILGALKAAGGLWFGWSGETGNE-D-Q-PLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCC---C--C---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCC-c-c-cchhhhcCCceEEEecCCH
Confidence 68999999999732 1 1 45789999999998 78899999999975332 1 1 122332 469999999999
Q ss_pred hhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHH
Q 002314 172 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 250 (937)
Q Consensus 172 ~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr 250 (937)
+++++||+||||++|||+|||++... .|+ +.|++|++||++||++|++.+++||+|||||||||+||++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999995332 466 569999999999999999999999999999999999999999
Q ss_pred hhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeeEEE
Q 002314 251 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVA 329 (937)
Q Consensus 251 ~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~-~~v~~~gr~~~i~ 329 (937)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||.+++|++... ..+.++||.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999988643 4577889999999
Q ss_pred EEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCC
Q 002314 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (937)
Q Consensus 330 v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r 409 (937)
++|+|||++.|...+..+ +...++.++++++++++|++||||||+|||+++|+||++||++||+|++||+|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999887655 5667889999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcC-CCCc
Q 002314 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKG 488 (937)
Q Consensus 410 ~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~-~~~g 488 (937)
+++++|++++++|+++|++||++||+.+|.||+|+.+.++++++.++|++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7899
Q ss_pred eEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHH
Q 002314 489 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (937)
Q Consensus 489 ~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~ 564 (937)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|++.++++|.+||+.+|+++||.+|..+..
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Confidence 99999999999999 7899999999999999999999999999999999999999999999999999999998754
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=1.9e-113 Score=990.11 Aligned_cols=454 Identities=32% Similarity=0.607 Sum_probs=421.7
Q ss_pred EEcCCccceEecCCCc--EEEEecCCcHHHhcccc-c-cCCcEEEEeCCCCCCCchhh-HHHH-HhhcCceEEEEecChh
Q 002314 99 VANRLPVSAIRRGEDS--WSLEISAGGLVSALLGV-K-EFEARWIGWAGVNVPDEIGQ-KALT-KALAEKRCIPVFLDED 172 (937)
Q Consensus 99 vsnrlP~~~~~~~~~~--~~~~~~~ggl~~~l~~~-~-~~~~~Wvgw~g~~~~~~~~~-~~~~-~~~~~~~~~pV~l~~~ 172 (937)
||||||+.++++++|. |.+++++|||++||.++ + ..+|+||||+|...+++++. ..+. ....+++|.||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 77799999999999988 4 47799999999753221111 1111 2245799999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHh
Q 002314 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (937)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (937)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|++.++++|+|||||||||+||.+||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999985333 477 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC--------------
Q 002314 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 317 (937)
Q Consensus 252 ~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~-------------- 317 (937)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++...
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875332
Q ss_pred -------ceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 318 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 318 -------~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
++.++||.++|.++|+|||++.|.+....+++.+.++.+|++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778999999999999999999999888888888899999999999999999999999999999999999999
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (937)
+||++++|++||||+.|+|+++++|++++++|+++|++||++||+.+|.||+|+.+.++.+++.+||++||||++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHH
Q 002314 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (937)
Q Consensus 471 G~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 550 (937)
|||||++||||||.+++||||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999999889999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002314 551 WAETFVSELND 561 (937)
Q Consensus 551 W~~~fl~~l~~ 561 (937)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998864
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=9.5e-114 Score=995.11 Aligned_cols=462 Identities=54% Similarity=0.930 Sum_probs=356.5
Q ss_pred cEEEEEcCCccceEecC-CCc--EEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCch--hhHHHHHhhcCceEEEEe
Q 002314 95 RLLVVANRLPVSAIRRG-EDS--WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 168 (937)
Q Consensus 95 ~livvsnrlP~~~~~~~-~~~--~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 168 (937)
|||||||||||.+++++ +|. |+++.++|||+++|.++ +..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 79999999999999876 666 88889999999999999 7799999999998776554 233345567899999999
Q ss_pred cChhhhhhhhhhhhhhccccccCCCCC-CccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHH
Q 002314 169 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (937)
Q Consensus 169 l~~~~~~~~Y~gf~n~~LWPlfH~~~~-~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp 246 (937)
|+++++++||+||||++|||+|||... .+ ....|+ +.|++|++||+.||++|++.+++||+|||||||||+||
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-----~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-----DLARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-----ccchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999999842 11 112466 56999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCC--ceeeCCe
Q 002314 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 324 (937)
Q Consensus 247 ~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~--~v~~~gr 324 (937)
++||++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++... +++++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987655 7999999
Q ss_pred eeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcC-CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEE
Q 002314 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (937)
Q Consensus 325 ~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq 403 (937)
.++|.++|+|||++.|.+.+.++++.+..+.+++++++ +++|++|||+|++|||.++|+||++||++||+++++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999899999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 404 i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
|+.|+|+++++|++++++|+++|++||++||+.+|.||+|+.+.++.+++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 484 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999965789999999999999999999999999999999999999999999999999999873
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-109 Score=938.11 Aligned_cols=463 Identities=49% Similarity=0.852 Sum_probs=430.6
Q ss_pred CCCCCcEEEEEcCCccceEe-cCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEE
Q 002314 90 TFSRQRLLVVANRLPVSAIR-RGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (937)
Q Consensus 90 ~~~~~~livvsnrlP~~~~~-~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (937)
.....|+|+||||+|+...+ .+++......++|||+++|.++ +..+++||||+|...+.++..........++...||
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v 90 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPV 90 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEEE
Confidence 34478999999999999863 3466788999999999999999 789999999999887632323445555679999999
Q ss_pred ecChhhhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHH
Q 002314 168 FLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (937)
Q Consensus 168 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp 246 (937)
+++.+++++||++|||++|||+|||+.... .|+ ..|+.|++||++||++|++.|++||+||||||||+++|
T Consensus 91 ~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P 162 (486)
T COG0380 91 ILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVP 162 (486)
T ss_pred ecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhH
Confidence 999999999999999999999999995333 366 55999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee---eCC
Q 002314 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQG 323 (937)
Q Consensus 247 ~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~---~~g 323 (937)
+|||++.|+++||||+|+|||++|+|+|||+|++|++|||+||+||||+++|++||+.+|+++++.. ....+. ++|
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~-~~~~~~~~~~~~ 241 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT-GDADIRFNGADG 241 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc-ccccccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999865 222333 447
Q ss_pred eeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcC-CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEE
Q 002314 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (937)
Q Consensus 324 r~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv 402 (937)
+.+++.++|+|||+..|.....++.++.++.++++.+.+ +++|++|||||++||++++|+||++||++||+|++||+|+
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvli 321 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLL 321 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEE
Confidence 999999999999999999998888888889999998876 9999999999999999999999999999999999999999
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHh
Q 002314 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (937)
Q Consensus 403 qi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc 482 (937)
||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|++..++++++.+||++||++++||++||||||++||+||
T Consensus 322 Qi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~ 401 (486)
T COG0380 322 QIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAA 401 (486)
T ss_pred EecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
|.+++|+||+|||+|++.+| .+|++|||||.+++|++|.+||+|+.+||++|++.+++.|.+||+++|+.+|+.+|...
T Consensus 402 q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 402 QRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred hcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99889999999999999999 77999999999999999999999999999999999999999999999999999999863
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=1.9e-104 Score=920.56 Aligned_cols=452 Identities=56% Similarity=0.926 Sum_probs=422.0
Q ss_pred cEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHH-HHhhcCceEEEEecChh
Q 002314 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDED 172 (937)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~-~~~~~~~~~~pV~l~~~ 172 (937)
||||||||+|+.+.++ + +..++|||++||.++ +..+++||||+|...++++++..+ .....+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999988654 2 567899999999998 778999999999865543332223 34567899999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHh
Q 002314 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (937)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (937)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|+++++++|+|||||||||++|.+||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999995332 466 5699999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEE
Q 002314 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331 (937)
Q Consensus 252 ~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~ 331 (937)
+.|+++||||+|||||++|+|+++|+|++||+|||+||+|||||++|++||+++|.+++|++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred ecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCC
Q 002314 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (937)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~ 411 (937)
|+|||++.|.+....+++.+....+|++++++++|++|||+++.||++.+|+||++|++++|+++++++|+|+++|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEE
Q 002314 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (937)
Q Consensus 412 ~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lV 491 (937)
+++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++|||||+....|+||
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976678899
Q ss_pred EeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHH
Q 002314 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 492 lSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 560 (937)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++||.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 599999999999999999999999999999999999999999999999999998875
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=3.4e-95 Score=848.40 Aligned_cols=456 Identities=54% Similarity=0.915 Sum_probs=425.6
Q ss_pred cEEEEEcCCccceEecCCCcEEEEecCCcHHHhcccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChhh
Q 002314 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 173 (937)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 173 (937)
||||||||+|+.++++++|.|+++.++|||+++|.++ +..+++||||+|...+.+++.........+|+|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999998889999999999999999998 778999999999877665544456677789999999999999
Q ss_pred hhhhhhhhhhhccccccCCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhh
Q 002314 174 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (937)
Q Consensus 174 ~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~ 252 (937)
++.||+||||++|||+|||++... .|+ +.|++|++||+.||++|.+.++++|+||||||||+++|.+||++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985332 366 56999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCC-CceeeCCeeeEEEEE
Q 002314 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 331 (937)
Q Consensus 253 ~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~-~~v~~~gr~~~i~v~ 331 (937)
.++++||||+|||||++|+|+++|++++|+++|++||+||||+++|++||+++|+++++++... ..++++|+.++|.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999988654 678999999999999
Q ss_pred ecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCC
Q 002314 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (937)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~ 411 (937)
|+|||++.|.+....++..+.+.+++..+.++++|++|||+++.||+..+|+||++|++++|+++++++|+|+|.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998766666655666677777889999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEE
Q 002314 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (937)
Q Consensus 412 ~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lV 491 (937)
+++|.++++++++++++||.+||..+|.||+++.+.++.+++.++|+.|||||+||++||||||++|||||+..++|+||
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999977788999
Q ss_pred EeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHH
Q 002314 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 492 lSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 559 (937)
+|+++|+++++ .+|++|||+|++++|++|.++|+|+++|++.++++++++|.+||+..|+++|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999985 89999999999999999999999999999999999999999999999999999886
No 12
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=347.96 Aligned_cols=252 Identities=30% Similarity=0.456 Sum_probs=217.3
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 656 (937)
+....+.+.|..+++++||+||||||+++..+| ..+.++++++++|++|+++++|.|+|+|||+..+++++
T Consensus 4 ~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~ 74 (266)
T COG1877 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERL 74 (266)
T ss_pred hhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHh
Confidence 455667788999999999999999999999999 68899999999999999999999999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHH
Q 002314 657 FQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 736 (937)
Q Consensus 657 ~~~~~l~liaenG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~e 736 (937)
++..+++++|+||++++..++.|.....+..++.|++.+.++++++++++||+++|.|+++++||||+++++....++..
T Consensus 75 ~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~ 154 (266)
T COG1877 75 FGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALA 154 (266)
T ss_pred cCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHH
Confidence 99779999999999997655554333335677889999999999999999999999999999999999977665544444
Q ss_pred HHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCC
Q 002314 737 MLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPD 816 (937)
Q Consensus 737 l~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~ 816 (937)
..... . ....++++.||++|||+|.++|||.|+++++++.+++ .++++|+|| |.|||+||++++.
T Consensus 155 ~~~~~-~---~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~------~~~~~~aGD-D~TDE~~F~~v~~---- 219 (266)
T COG1877 155 EAATL-I---NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD------GRFPIFAGD-DLTDEDAFAAVNK---- 219 (266)
T ss_pred HHHhc-c---ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC------CCcceecCC-CCccHHHHHhhcc----
Confidence 33332 1 1112899999999999999999999999999998742 258899999 9999999999975
Q ss_pred CCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEE
Q 002314 817 DGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFS 896 (937)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (937)
...++
T Consensus 220 ---------------------------------------------------------------------------~~~~~ 224 (266)
T COG1877 220 ---------------------------------------------------------------------------LDSIT 224 (266)
T ss_pred ---------------------------------------------------------------------------CCCce
Confidence 13689
Q ss_pred EEECCCCCccceeeCCHHHHHHHHHHhhhcc
Q 002314 897 CAVGRPRTNARFLLQSSDEVVSFLKKLADAS 927 (937)
Q Consensus 897 ~~VG~~~t~A~y~l~~~~~V~~~L~~La~~~ 927 (937)
++||.+.|+|.|++.++..+..+|..+....
T Consensus 225 v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 225 VKVGVGSTQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred EEecCCcccccccccccHHHHHHHHHHHHHh
Confidence 9999999999999999999999999987654
No 13
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=2.9e-39 Score=357.11 Aligned_cols=245 Identities=20% Similarity=0.330 Sum_probs=196.8
Q ss_pred HHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceE
Q 002314 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWL 664 (937)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~l 664 (937)
....+++++|||||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..++++++..++++
T Consensus 92 ~~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~l 160 (354)
T PLN02151 92 HKSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYY 160 (354)
T ss_pred HhhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceE
Confidence 3466788999999999999999999 678999999999999996 46899999999999999999779999
Q ss_pred EeeCceEEEecC--Ceeeec---cccccChhHHHHHHHHHHHH---HhcCCCceeeeecceEEEEeeccChhhhHHHHHH
Q 002314 665 AAENGMFLRCTT--GKWMTT---MPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 736 (937)
Q Consensus 665 iaenG~~ir~~~--~~w~~~---~~~~~~~~w~~~v~~il~~~---~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~e 736 (937)
+|+||++++.++ ..|+.. .....+..|...+.++++.+ ++++||+++|+|+++++||||+++++.. .+
T Consensus 161 aGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~----~~ 236 (354)
T PLN02151 161 AGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW----SD 236 (354)
T ss_pred EEeCCceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----HH
Confidence 999999998532 245310 00123556777776666554 5789999999999999999999976522 23
Q ss_pred HHHHHhcCCCCCC-CeEEEEcCeEEEEEEC-CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCC
Q 002314 737 MLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPEL 814 (937)
Q Consensus 737 l~~~L~~~~~~~~-~v~v~~Gk~~vEV~p~-gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~ 814 (937)
+..++ ..++.+. .+.++.|++++||+|. ++|||.||++||+.+++. + ...++++|||| |.|||+||++++..
T Consensus 237 l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~--~-~~~~~pvyiGD-D~TDEDaF~~L~~~- 310 (354)
T PLN02151 237 LANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYA--N-CTDVFPIYIGD-DRTDEDAFKILRDK- 310 (354)
T ss_pred HHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccc--c-CCCCeEEEEcC-CCcHHHHHHHHhhc-
Confidence 33333 3333343 4899999999999995 999999999999998752 1 12468999999 99999999999641
Q ss_pred CCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCe
Q 002314 815 PDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENY 894 (937)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (937)
..+
T Consensus 311 -----------------------------------------------------------------------------~~G 313 (354)
T PLN02151 311 -----------------------------------------------------------------------------KQG 313 (354)
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 136
Q ss_pred EEEEEC--CCCCccceeeCCHHHHHHHHHHhhhcc
Q 002314 895 FSCAVG--RPRTNARFLLQSSDEVVSFLKKLADAS 927 (937)
Q Consensus 895 ~~~~VG--~~~t~A~y~l~~~~~V~~~L~~La~~~ 927 (937)
++|+|| .++|.|+|+|+||++|..||+.|+...
T Consensus 314 ~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~ 348 (354)
T PLN02151 314 LGILVSKYAKETNASYSLQEPDEVMEFLERLVEWK 348 (354)
T ss_pred ccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhh
Confidence 788887 689999999999999999999998753
No 14
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=8.7e-39 Score=354.21 Aligned_cols=253 Identities=19% Similarity=0.305 Sum_probs=199.9
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 656 (937)
|+.-+-+.++...++.+|||||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..+.++
T Consensus 97 l~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 97 LEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred HHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHh
Confidence 443344455667788999999999999999888 456899999999999994 689999999999999999
Q ss_pred hcccCceEEeeCceEEEecCCeeeec------cccccChhHHHHHHHH---HHHHHhcCCCceeeeecceEEEEeeccCh
Q 002314 657 FQEYNLWLAAENGMFLRCTTGKWMTT------MPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYADV 727 (937)
Q Consensus 657 ~~~~~l~liaenG~~ir~~~~~w~~~------~~~~~~~~w~~~v~~i---l~~~~~~~~Gs~iE~K~~sl~~hyr~ad~ 727 (937)
++..++++||+||++++.+++.|... ........|+..+.++ ++.+++++||++||+|+++++||||++++
T Consensus 166 ~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~ 245 (366)
T PLN03017 166 VKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDE 245 (366)
T ss_pred hcccCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCH
Confidence 77667899999999998644443210 0011233466555555 66778899999999999999999999987
Q ss_pred hhhHHHHHHHHHHHhcCCCCCC-CeEEEEcCeEEEEEEC-CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHH
Q 002314 728 EFGRIQARDMLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDED 805 (937)
Q Consensus 728 e~~~~~a~el~~~L~~~~~~~~-~v~v~~Gk~~vEV~p~-gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEd 805 (937)
+.. .++..++ ..++.+. .++++.|++++||+|. ++|||.||++||+.+++.. .+.++++|||| |.|||+
T Consensus 246 ~~~----~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDED 316 (366)
T PLN03017 246 KKW----SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDED 316 (366)
T ss_pred HHH----HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccHH
Confidence 542 2333333 3333333 4899999999999994 9999999999999988531 12468999999 999999
Q ss_pred HHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 002314 806 VYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYN 885 (937)
Q Consensus 806 Mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (937)
||++++..
T Consensus 317 aF~~L~~~------------------------------------------------------------------------ 324 (366)
T PLN03017 317 AFKMLRDR------------------------------------------------------------------------ 324 (366)
T ss_pred HHHHHhhc------------------------------------------------------------------------
Confidence 99999640
Q ss_pred cccCCCCCeEEEEEC--CCCCccceeeCCHHHHHHHHHHhhhcc
Q 002314 886 VLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADAS 927 (937)
Q Consensus 886 ~~~~~~~~~~~~~VG--~~~t~A~y~l~~~~~V~~~L~~La~~~ 927 (937)
..+|+|+|| .++|.|+|+|+||++|..||+.|++..
T Consensus 325 ------~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 325 ------GEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred ------CCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 137999999 589999999999999999999998754
No 15
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=1.6e-38 Score=355.26 Aligned_cols=246 Identities=20% Similarity=0.298 Sum_probs=198.3
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
+.+|+++++++|||||||||++++++| +.+.++++++++|++|+++ ..|+|||||++++|+++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 457899999999999999999999999 7899999999999999986 47999999999999999998899
Q ss_pred eEEeeCceEEEecCC-----eeeecc-----------ccccChhHHHHHHHHHH---HHHhcCCCceeeeecceEEEEee
Q 002314 663 WLAAENGMFLRCTTG-----KWMTTM-----------PEHLNMEWVDSLKHVFE---YFTERTPRSHFEQRETSLVWNYK 723 (937)
Q Consensus 663 ~liaenG~~ir~~~~-----~w~~~~-----------~~~~~~~w~~~v~~il~---~~~~~~~Gs~iE~K~~sl~~hyr 723 (937)
+++|+||++++...+ .|...+ ......+|...+.++++ .+++++||++||+|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 999999999974211 121110 00124567755555544 46777899999999999999999
Q ss_pred ccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEE-CCCCHHHHHHHHHHHhcccccCCCCCc--eEEEEecCC
Q 002314 724 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAID--YVLCIGHFL 800 (937)
Q Consensus 724 ~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p-~gvnKG~Av~~Ll~~l~~~~~~~~~~d--~vl~iGD~d 800 (937)
+++++++..++.++...+ .. ...+.++.|++++||+| .++|||.||++|++++++. ..+ .++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~-----~~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLS-----NCDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCC-----cccceeEEEECC-C
Confidence 998776665666665555 22 12488999999999999 5999999999999998842 122 3599999 9
Q ss_pred CCcHHHHHhcCcCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002314 801 GKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSD 880 (937)
Q Consensus 801 ~nDEdMf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (937)
.|||+||++++..
T Consensus 330 ~TDedmF~~L~~~------------------------------------------------------------------- 342 (384)
T PLN02580 330 RTDEDAFKVLREG------------------------------------------------------------------- 342 (384)
T ss_pred chHHHHHHhhhcc-------------------------------------------------------------------
Confidence 9999999998641
Q ss_pred CCccccccCCCCCeEEEEEC--CCCCccceeeCCHHHHHHHHHHhhhcc
Q 002314 881 KTSYNVLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADAS 927 (937)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~VG--~~~t~A~y~l~~~~~V~~~L~~La~~~ 927 (937)
..+++|+|| .++|.|+|+|+||+||..||+.|+...
T Consensus 343 -----------~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 343 -----------NRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred -----------CCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 125777776 589999999999999999999998754
No 16
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=5.4e-36 Score=365.96 Aligned_cols=528 Identities=14% Similarity=0.162 Sum_probs=335.0
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhc-----------------cCccchHH-HHhhhcCCEEEE
Q 002314 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----------------TLPSRSDL-LRAVLAADLVGF 293 (937)
Q Consensus 232 ~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr-----------------~lp~r~ei-l~~ll~aDlIgF 293 (937)
+|+||.|+++--.++..|++.. ++|++++.|.. ..+-++ .++.|-+. -..+-.||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999999889999888865 89999999963 112111 01222221 234567999998
Q ss_pred eCHHHHHHHHHHH-------HHHhCcccCCCceeeCCe-eeEEEEEecccChhhhhhhhcCCchH-------------HH
Q 002314 294 HTYDYARHFVSAC-------TRILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPVQ-------------VH 352 (937)
Q Consensus 294 ~t~~~~~~Fl~~~-------~r~lg~~~~~~~v~~~gr-~~~i~v~P~GID~~~f~~~~~~~~~~-------------~~ 352 (937)
.|......-...- .+.|.. ....++..+|+ ..++.|||+|||++.|.+.....+.. ..
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 8876655432210 011100 01123333332 34899999999999998742211100 01
Q ss_pred HHHHHHHh--cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHH----HHHHHHHHHHH
Q 002314 353 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 426 (937)
Q Consensus 353 ~~~lr~~~--~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y----~~l~~~l~~lv 426 (937)
...++..+ +++++||+|||+++.||+..+|+||..+.+..+.. ++.| ++|... +.++. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 12344333 47789999999999999999999999986543321 2333 344321 11111 12334566666
Q ss_pred HHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc
Q 002314 427 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 502 (937)
Q Consensus 427 ~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l 502 (937)
.+.+- .+ .|. |.|.++.+++..+|+.| ||||+||++||||++++|||||+ .|+|+|..+|..+.+
T Consensus 542 ~~lgL----~g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDL----YG--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCC----CC--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 55432 22 355 47899999999999998 69999999999999999999994 799999999988887
Q ss_pred --CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHHh-hhcccc------C
Q 002314 503 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEA-QLRIKQ------V 573 (937)
Q Consensus 503 --g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~-~~~~~~------~ 573 (937)
|.+|++|+|.|++++|++|.++|+.+ +.++++..++++.+..|+|...+++++..+..+...+ +.+... .
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~ 689 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEAS 689 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 67899999999999999999999854 4666677788888999999999999998887764332 111000 0
Q ss_pred ---CCC-------------------------------cc-------hHHHHHHHH----------------------hcC
Q 002314 574 ---PPS-------------------------------LR-------EADSIERYL----------------------RSN 590 (937)
Q Consensus 574 ---~~~-------------------------------L~-------~~~~~~~y~----------------------~s~ 590 (937)
.+. ++ +...+.... ...
T Consensus 690 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1050)
T TIGR02468 690 EDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRR 769 (1050)
T ss_pred cccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccccc
Confidence 000 00 011111111 112
Q ss_pred CeEEE--EecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhh---cCCCCeEEEEcCCChhhHHHHhcccC----
Q 002314 591 NRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALC---HDPKTTIVVLSGSDRNVLDKNFQEYN---- 661 (937)
Q Consensus 591 ~rLI~--lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~---~d~g~~V~IvSGR~~~~L~~~~~~~~---- 661 (937)
++||+ +|+|+| +.. .+.+.++++.+. ......++++|||++..+.+++...+
T Consensus 770 ~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~ 830 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPT 830 (1050)
T ss_pred ceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 45666 899999 221 123344444443 22347789999999999999886653
Q ss_pred --ceEEeeCceEEEecC------Ceeeec--cccccChhH-HHHHHHHHHHHHhcC--------CCceeeeecce--EEE
Q 002314 662 --LWLAAENGMFLRCTT------GKWMTT--MPEHLNMEW-VDSLKHVFEYFTERT--------PRSHFEQRETS--LVW 720 (937)
Q Consensus 662 --l~liaenG~~ir~~~------~~w~~~--~~~~~~~~w-~~~v~~il~~~~~~~--------~Gs~iE~K~~s--l~~ 720 (937)
..+||.-|++|+... ..|..- ....++..| .+.+...+..+.... ++...+....+ ..+
T Consensus 831 ~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~ 910 (1050)
T TIGR02468 831 DFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCY 910 (1050)
T ss_pred CCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceE
Confidence 358999999998641 222210 001234566 344665555554321 33444443322 223
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEE--cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceE-EEEe
Q 002314 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ--GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV-LCIG 797 (937)
Q Consensus 721 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~--Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~v-l~iG 797 (937)
.|.-.|++.. ...+++.+.| .. ....++++. +...++|.|..+|||.||++|+.+++ +|.+.+ +++|
T Consensus 911 SY~v~d~~~~-~~v~elr~~L-r~--~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~VfaG 980 (1050)
T TIGR02468 911 AFKVKDPSKV-PPVKELRKLL-RI--QGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFVG 980 (1050)
T ss_pred EEEecCcccC-ccHHHHHHHH-Hh--CCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEec
Confidence 3321232221 1235566666 22 122344443 35799999999999999999999998 678888 6699
Q ss_pred cCCCC-c-HHHHHhc
Q 002314 798 HFLGK-D-EDVYAFF 810 (937)
Q Consensus 798 D~d~n-D-EdMf~~~ 810 (937)
| +.| | |+|+.-+
T Consensus 981 d-SGntD~e~Ll~G~ 994 (1050)
T TIGR02468 981 E-SGDTDYEGLLGGL 994 (1050)
T ss_pred c-CCCCCHHHHhCCc
Confidence 9 888 9 6665443
No 17
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=1.5e-39 Score=347.92 Aligned_cols=203 Identities=36% Similarity=0.603 Sum_probs=147.3
Q ss_pred EEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCceEEEe
Q 002314 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (937)
Q Consensus 595 ~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~ir~ 674 (937)
||||||||+++.++| +.+.++++++++|++|++++++.|+|+|||++.+++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999999988 68899999999999999999999999999999997777776689999999999998
Q ss_pred cCC-eeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC-CCeE
Q 002314 675 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVE 752 (937)
Q Consensus 675 ~~~-~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~-~~v~ 752 (937)
+++ .|.... ...+..|++.+.++++++++++||+++|+|+++++||||+++++++..++.++.+++ .+.+.. .+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 665 454322 456778999999999999999999999999999999999999998887888888887 443333 4799
Q ss_pred EEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 753 v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
++.|+++|||+|.+++||.|+++|+++++.. ..+.++++|+|| |.|||+||++++.
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~---~~~~~~~l~~GD-D~tDE~~f~~~~~ 205 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFA---GPKPDFVLYIGD-DRTDEDAFRALRE 205 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTT
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCcc---ccccceeEEecC-CCCCHHHHHHHHh
Confidence 9999999999999999999999999998731 123689999999 9999999999976
No 18
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=2.6e-36 Score=324.76 Aligned_cols=238 Identities=24% Similarity=0.360 Sum_probs=202.0
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeC
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaen 668 (937)
+++++|||||||||++..++| ..+.++++++++|++|++++++.|+|+|||++.++...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999998888 56889999999999999999999999999999999887766689999999
Q ss_pred ceEEEecCC--eeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeecc-ChhhhHHHHHHHHHHHhcCC
Q 002314 669 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 745 (937)
Q Consensus 669 G~~ir~~~~--~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~a-d~e~~~~~a~el~~~L~~~~ 745 (937)
|++++.++. .|... ......|++.+.++++++.++ ||+++|+|+++++||||.+ +++++..++.++..++ .
T Consensus 72 G~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~-- 145 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNL--TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-L-- 145 (244)
T ss_pred CEEEecCCCcceeeec--hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-h--
Confidence 999986322 24332 122257888888888888887 9999999999999999999 7888877787877766 2
Q ss_pred CCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCC
Q 002314 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTR 825 (937)
Q Consensus 746 ~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~ 825 (937)
...++.++.|+.++|++|.++|||.|+++++++++ ...++++|||| +.||++||+.++.. .
T Consensus 146 -~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~-~---------- 206 (244)
T TIGR00685 146 -SFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQ-W---------- 206 (244)
T ss_pred -cCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhcc-c----------
Confidence 23468899999999999999999999999999987 34688999999 99999999998431 0
Q ss_pred CCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEEEEE--CCCC
Q 002314 826 PTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAV--GRPR 903 (937)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--G~~~ 903 (937)
...++++|+| |..+
T Consensus 207 ----------------------------------------------------------------~~~g~~~v~v~~g~~~ 222 (244)
T TIGR00685 207 ----------------------------------------------------------------GNYGFYPVPIGSGSKK 222 (244)
T ss_pred ----------------------------------------------------------------CCCCeEEEEEecCCcC
Confidence 0025799999 8889
Q ss_pred CccceeeCCHHHHHHHHHHhh
Q 002314 904 TNARFLLQSSDEVVSFLKKLA 924 (937)
Q Consensus 904 t~A~y~l~~~~~V~~~L~~La 924 (937)
|.|.|+++++++|..+|+.|+
T Consensus 223 ~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 223 TVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCceEeCCCHHHHHHHHHHHh
Confidence 999999999999999999986
No 19
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=8.7e-36 Score=324.19 Aligned_cols=237 Identities=22% Similarity=0.240 Sum_probs=197.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG 669 (937)
++++||+||||||++...+| ++..++++++++|++|++++++.|+|+|||+...+.++++.+++.++|+||
T Consensus 13 ~~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nG 83 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHG 83 (266)
T ss_pred CCEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCC
Confidence 36899999999999998888 567899999999999998789999999999999999999988888999999
Q ss_pred eEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCC
Q 002314 670 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 749 (937)
Q Consensus 670 ~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~ 749 (937)
++++..++.|.. ...+.+|...+.+.++.+..++||+++|.|+.+++|||+.++.+ .....++.+.+ .+...
T Consensus 84 a~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i-~~~~~-- 155 (266)
T PRK10187 84 AERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRI-TQIWP-- 155 (266)
T ss_pred CeeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHH-HhhCC--
Confidence 999864444422 22455677777788888888999999999999999999977422 11223343344 22121
Q ss_pred CeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCCCCCC
Q 002314 750 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDA 829 (937)
Q Consensus 750 ~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~~~~~ 829 (937)
.+.+..|+.++||+|.++|||.||++|+++++ +..++++|||| +.|||+||+++..
T Consensus 156 ~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~----------------- 211 (266)
T PRK10187 156 QLALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNR----------------- 211 (266)
T ss_pred ceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHh-----------------
Confidence 36677899999999999999999999999998 45789999999 9999999999954
Q ss_pred cCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCeEEEEECCCCCcccee
Q 002314 830 IKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFL 909 (937)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~t~A~y~ 909 (937)
.++++|+||.+.|.|.|+
T Consensus 212 --------------------------------------------------------------~~g~~vavg~a~~~A~~~ 229 (266)
T PRK10187 212 --------------------------------------------------------------LGGISVKVGTGATQASWR 229 (266)
T ss_pred --------------------------------------------------------------cCCeEEEECCCCCcCeEe
Confidence 247999999999999999
Q ss_pred eCCHHHHHHHHHHhhhccCc
Q 002314 910 LQSSDEVVSFLKKLADASSS 929 (937)
Q Consensus 910 l~~~~~V~~~L~~La~~~~~ 929 (937)
|++|++|.+||+.|+.....
T Consensus 230 l~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 230 LAGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999987664
No 20
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=3.6e-25 Score=252.17 Aligned_cols=300 Identities=22% Similarity=0.204 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCC
Q 002314 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 289 (937)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aD 289 (937)
.+..|...++.++..+... ...|+||+|+++.+.++...+. .++|+++++|+++.... . ..+..+...+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLLD-LDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhcccccc-CCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCC
Confidence 4677777777776653222 2569999999998777666543 36889999999875321 1 01122334445678
Q ss_pred EEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEE
Q 002314 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 366 (937)
Q Consensus 290 lIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iI 366 (937)
.+.+.+.++++. .+ . ..++ ++|+|||+........ .......+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~----------------~~--~--~~~~-vipngvd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPP----------------QV--P--PRKV-IIPPSIDPLSGKNREL---SPADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCC----------------CC--C--CceE-EeCCCCCCCccccCCC---CHHHHHHHHHHhCCCCCCcEE
Confidence 777665332211 01 1 1233 8999999753211111 112334556666 377899
Q ss_pred EEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 002314 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (937)
Q Consensus 367 L~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~ 446 (937)
++|||+++.||++.+++||..+.+++|+++ |+++|.+... .+++.++.++ +.++.+. . ..|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~---~~~~~~~----~--~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEE---VLEYAEG----D--PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHH---HHHHhCC----C--CCeEEEec
Confidence 999999999999999999999988878754 8878754321 1223333233 2222211 1 23665443
Q ss_pred C-CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHH
Q 002314 447 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (937)
Q Consensus 447 ~-v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~ 523 (937)
. ++.+++.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 489999999999999999999999999999999994 799999999988877 678999874 5688999999
Q ss_pred HHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHH
Q 002314 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (937)
Q Consensus 524 aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 561 (937)
+++++ +++.++.+++++++ ..|+|...+++++..+++
T Consensus 334 ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99864 56777788888887 689999999999887764
No 21
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.94 E-value=2.4e-24 Score=246.71 Aligned_cols=273 Identities=18% Similarity=0.214 Sum_probs=203.4
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
...|+||+|+.. .+...++++.|++++.+.+|..|.. +.+ -.++.|.+.+... ..++. ..
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~~~-~~~~~---~~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQFL-KKFYE---ER 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCHHH-HHHHH---hh
Confidence 357999999843 3445667778999999999987531 111 1357777766533 33322 11
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHHHH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af~ 386 (937)
+...++.++|+|||.+.|.+.. ...+++++ .++++|+++||+.+.||+..+++|+.
T Consensus 158 -------------~~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 -------------LPNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -------------CCCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1124578999999998886421 11233444 26788999999999999999999999
Q ss_pred HhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002314 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (937)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (937)
++.+++|+++ |+++|.+......+...+.+++++++.+++. .|+ +.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 9998888754 8888865422222233556677777665442 355 47889999999999999999999
Q ss_pred CC-CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceE-EECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 467 SL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 467 Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gl-lVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
|. .||||++++|||||+ .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.++++++. +.++.++++++
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 97 499999999999994 789999988888877 56787 6789999999999999998763 45677777766
Q ss_pred h-hcCCHHHHHHHHHHHHHHh
Q 002314 543 V-TTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 543 V-~~~~~~~W~~~fl~~l~~~ 562 (937)
+ ++|+|..-++++++.|+..
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 5 7899999999998887653
No 22
>PLN02939 transferase, transferring glycosyl groups
Probab=99.94 E-value=2.5e-24 Score=260.33 Aligned_cols=322 Identities=16% Similarity=0.185 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhh-----CCCCeEEEEEccC-----CCchhhh-ccCccc
Q 002314 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR 278 (937)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~-----~~~~~I~~flH~P-----fPs~e~f-r~lp~r 278 (937)
....|.-+.++.++.+.+.-..+||||+||||..++|.++++. +.++++.|++|.- ||...+- ..+|+.
T Consensus 589 n~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~ 668 (977)
T PLN02939 589 DFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVH 668 (977)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHH
Confidence 3455555666666666554346799999999999985554432 3568999999984 3321111 112211
Q ss_pred ----------------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhh
Q 002314 279 ----------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIR 342 (937)
Q Consensus 279 ----------------~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~ 342 (937)
.-+..++..||.|..-++.|++.-+. ..--|++. .+..+..++.+||||||++.|.+
T Consensus 669 ~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnP 741 (977)
T PLN02939 669 QLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNP 741 (977)
T ss_pred HccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCC
Confidence 11234677899999999999887554 11111110 02235678899999999999986
Q ss_pred hhcC--------Cch---HHHHHHHHHHhc------CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEE
Q 002314 343 ALEI--------NPV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (937)
Q Consensus 343 ~~~~--------~~~---~~~~~~lr~~~~------~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~ 405 (937)
.... ... ......++++++ +.++|++|||+.+.||++.+++|+..+++ ++ +.||++|
T Consensus 742 atD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvG 815 (977)
T PLN02939 742 STDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLG 815 (977)
T ss_pred ccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEe
Confidence 5310 000 012345777773 35799999999999999999999998875 23 4577776
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCC
Q 002314 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (937)
Q Consensus 406 ~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~ 485 (937)
.+ ++ ..+++++++++.+++. . ..|.| .+.++......+|+.||+||+||.+|||||+.+|||+|+
T Consensus 816 dG-----p~-~~~e~eL~~La~~l~l----~--drV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG-- 880 (977)
T PLN02939 816 SS-----PV-PHIQREFEGIADQFQS----N--NNIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG-- 880 (977)
T ss_pred CC-----Cc-HHHHHHHHHHHHHcCC----C--CeEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC--
Confidence 32 21 1345566677766432 1 13665 567787778899999999999999999999999999994
Q ss_pred CCceEEEeCCCCccccc-----------CCceEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHhhhhhhhcCCHHHH
Q 002314 486 KKGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEW 551 (937)
Q Consensus 486 ~~g~lVlSe~aG~~~~l-----------g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~V~~~~~~~W 551 (937)
.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.+.++..+. ....|+|...
T Consensus 881 --tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~ 956 (977)
T PLN02939 881 --SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSS 956 (977)
T ss_pred --CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHH
Confidence 699999999988765 247999999999999999999986 2344455444432 3467999999
Q ss_pred HHHHHHHHHHhH
Q 002314 552 AETFVSELNDTV 563 (937)
Q Consensus 552 ~~~fl~~l~~~~ 563 (937)
++.++.-...+.
T Consensus 957 A~qYeeLY~~ll 968 (977)
T PLN02939 957 ASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHHH
Confidence 999987766654
No 23
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.94 E-value=2.4e-24 Score=253.15 Aligned_cols=311 Identities=23% Similarity=0.263 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhC----CCCeEEEEEccCC-Cc---hhhhcc--Ccc--------
Q 002314 216 KANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPF-PS---SEIHRT--LPS-------- 277 (937)
Q Consensus 216 ~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~----~~~~I~~flH~Pf-Ps---~e~fr~--lp~-------- 277 (937)
-+++...+.+...-..+|+||+||||-.++|.++++.. .+.|++++.|..- .. .+.+.. +|+
T Consensus 103 ~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 182 (466)
T PRK00654 103 FFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGL 182 (466)
T ss_pred HHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhh
Confidence 34444444433332367999999999999999998653 4689999999862 10 111111 110
Q ss_pred -----chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeeEEEEEecccChhhhhhhhcCC---
Q 002314 278 -----RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN--- 347 (937)
Q Consensus 278 -----r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~--~~gr~~~i~v~P~GID~~~f~~~~~~~--- 347 (937)
..-+..++..||.|...++.+++..... ..| .++. +..+..++.+||||||.+.|.+.....
T Consensus 183 ~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~ 254 (466)
T PRK00654 183 EFYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAA 254 (466)
T ss_pred hcCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCccccc
Confidence 1112335667788777777665543210 000 0010 112345789999999999987642100
Q ss_pred --------chHHHHHHHHHHhc----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHH
Q 002314 348 --------PVQVHIKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY 415 (937)
Q Consensus 348 --------~~~~~~~~lr~~~~----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y 415 (937)
...+..+.++++++ +.++|++|||+++.||++.+++|+++++++ + +.|+++|.+ + +
T Consensus 255 ~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g---~-~-- 322 (466)
T PRK00654 255 NYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG---D-P-- 322 (466)
T ss_pred ccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC---c-H--
Confidence 01122345666663 567999999999999999999999998754 2 457777632 1 1
Q ss_pred HHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC
Q 002314 416 QRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF 495 (937)
Q Consensus 416 ~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~ 495 (937)
.+++++++++.+.+. .+.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+|+ .|+|+|..
T Consensus 323 -~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~ 388 (466)
T PRK00654 323 -ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRT 388 (466)
T ss_pred -HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCC
Confidence 244566677665432 24444454 66667899999999999999999999999999994 79999999
Q ss_pred CCccccc--C------CceEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 496 AGAAQSL--G------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 496 aG~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
+|..+.+ + .+|++|+|.|+++++++|.++++. .++.+.++..+.+ ...++|..-++++++-.+++
T Consensus 389 gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 389 GGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9998887 4 579999999999999999999863 2233444444333 26789999888887766544
No 24
>PLN02316 synthase/transferase
Probab=99.93 E-value=5.3e-24 Score=262.04 Aligned_cols=311 Identities=14% Similarity=0.125 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhh-----CCCCeEEEEEccCCCchhhhccCccchHHHH
Q 002314 209 SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR 283 (937)
Q Consensus 209 ~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~-----~~~~~I~~flH~PfPs~e~fr~lp~r~eil~ 283 (937)
+...-|..++++.++.+.+.-..+||||+||||-.++|.++++. ..++|+++++|..- | ....+-.
T Consensus 687 Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~lk~ 757 (1036)
T PLN02316 687 NDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHIGK 757 (1036)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHHHH
Confidence 34556666677777766554446799999999999999999874 35789999999642 1 1122445
Q ss_pred hhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcC--C-----c----h-HH
Q 002314 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QV 351 (937)
Q Consensus 284 ~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~--~-----~----~-~~ 351 (937)
++..||.|..-++.|++..+.. + . ...+..++.+||+|||++.|.+.... + + . ..
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~ 824 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRA 824 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhh
Confidence 7778999999999887765430 0 0 11234678899999999988764210 0 0 0 11
Q ss_pred HHHHHHHHhc----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q 002314 352 HIKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG 427 (937)
Q Consensus 352 ~~~~lr~~~~----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~ 427 (937)
....++++++ +.++|++||||.+.||+..+++|+.++++. + +.||++|.+ ++ ..++.++++++.
T Consensus 825 ~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l~~La~ 892 (1036)
T PLN02316 825 AKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDFVNLAN 892 (1036)
T ss_pred hHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHHHHHHH
Confidence 2345677763 568999999999999999999999998863 2 446767632 22 134567777777
Q ss_pred HhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--C--
Q 002314 428 RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G-- 503 (937)
Q Consensus 428 ~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g-- 503 (937)
+++..+. ..|.| .+..+......+|+.||+||+||.+|||||+.+|||+|+ .|+|++..+|..+.+ +
T Consensus 893 ~Lg~~~~----~rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~ 963 (1036)
T PLN02316 893 QLHSSHH----DRARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDH 963 (1036)
T ss_pred HhCccCC----CeEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhcccccc
Confidence 6654332 13554 344554444589999999999999999999999999994 689999999999887 2
Q ss_pred -----------CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHHh
Q 002314 504 -----------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 504 -----------~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~~ 562 (937)
.+|++|+|.|+++++++|.++|....+.+..+....++.+ ..++|..-+++++.-.+.+
T Consensus 964 ~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 964 DKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred ccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 3799999999999999999999865333333334444444 5699999999998776654
No 25
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.93 E-value=2.3e-24 Score=251.50 Aligned_cols=315 Identities=15% Similarity=0.187 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchh--hhc------------cCc
Q 002314 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLP 276 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e--~fr------------~lp 276 (937)
|.....+...+...+.+.....|+||+|+++..++..++++.. ++|++++.|....... +.. .+.
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNIS 172 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchH
Confidence 4333444444545444433356999999988777777776644 6899999997532110 000 001
Q ss_pred cch-HHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCC-eeeEEEEEecccChhhhhhhhcCCchHHHHH
Q 002314 277 SRS-DLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQG-RLTRVAAFPIGIDSERFIRALEINPVQVHIK 354 (937)
Q Consensus 277 ~r~-eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~g-r~~~i~v~P~GID~~~f~~~~~~~~~~~~~~ 354 (937)
.+- .....+..+|.|...+...+..-+. .+.+ ...++.++|+|||++.|.+....++.. ..+
T Consensus 173 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~-~~~ 236 (439)
T TIGR02472 173 RRIEAEEETLAHASLVITSTHQEIEEQYA---------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEETS-EID 236 (439)
T ss_pred HHHHHHHHHHHhCCEEEECCHHHHHHHHH---------------hccCCCccceEEECCCcChhhcCCCCccccch-hHH
Confidence 010 0112334567666555432221110 0111 245788999999999997643221111 122
Q ss_pred HHHHHh---cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHH----HHHHHHHHHHH
Q 002314 355 ELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVG 427 (937)
Q Consensus 355 ~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~----~l~~~l~~lv~ 427 (937)
..++++ .++++|++|||+++.||++.+|+||..+.+..+.. +++| ++|.+ .+.++++ ++.+++.+++.
T Consensus 237 ~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g--~~~~~l~~~~~~~~~~~~~~~~ 311 (439)
T TIGR02472 237 NLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCR--DDIRKMESQQREVLQKVLLLID 311 (439)
T ss_pred HHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCc--cccccccHHHHHHHHHHHHHHH
Confidence 222222 36789999999999999999999998753221111 2322 23321 1111121 22334444554
Q ss_pred HhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc----cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-
Q 002314 428 RINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (937)
Q Consensus 428 ~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l- 502 (937)
+++ ..+ .|+ |.|.++.+++.++|+.| |+||+||.+||||++++|||||+ .|+|+|..+|..+.+
T Consensus 312 ~~~----l~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~ 380 (439)
T TIGR02472 312 RYD----LYG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIA 380 (439)
T ss_pred HcC----CCc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhc
Confidence 432 222 355 57889999999999988 99999999999999999999994 799999999988887
Q ss_pred -CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHH
Q 002314 503 -GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (937)
Q Consensus 503 -g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l 559 (937)
|.+|++|+|.|++++|++|.++++++ +++.++.+++++++ +.|+|..-++++++-|
T Consensus 381 ~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 381 NCRNGLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CCCcEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 46899999999999999999999865 56777788888876 6789999888887654
No 26
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.93 E-value=6.2e-24 Score=250.16 Aligned_cols=314 Identities=22% Similarity=0.267 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCC--CCeEEEEEccCCC----chhhhcc--Cccc-----
Q 002314 212 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFP----SSEIHRT--LPSR----- 278 (937)
Q Consensus 212 ~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~--~~~I~~flH~PfP----s~e~fr~--lp~r----- 278 (937)
..+..++++.++.+.+.-...|+||+||||..++|.++++... ++|++++.|...+ +.+.+.. +|+.
T Consensus 109 ~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 109 ERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 3444455555555544334679999999999999999988754 3899999998642 1122211 1110
Q ss_pred --------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeeEEEEEecccChhhhhhhhcCC-
Q 002314 279 --------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN- 347 (937)
Q Consensus 279 --------~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~--~~gr~~~i~v~P~GID~~~f~~~~~~~- 347 (937)
.-+..++..||.|...++.|++..... ..+ .+++ +..+..++.++|||||.+.|.+.....
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~ 260 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYL 260 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCccc
Confidence 012335667777777777666544321 000 0010 011346788999999999987532100
Q ss_pred ----------chHHHHHHHHHHhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCCh
Q 002314 348 ----------PVQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV 412 (937)
Q Consensus 348 ----------~~~~~~~~lr~~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~ 412 (937)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+ +
T Consensus 261 ~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~- 330 (473)
T TIGR02095 261 KANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG---D- 330 (473)
T ss_pred ccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC---C-
Confidence 00112345666663 5789999999999999999999999987542 457777632 1
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEE
Q 002314 413 PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 492 (937)
Q Consensus 413 ~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVl 492 (937)
+ .+.+++++++.+.+. .+.+ .+..+.+++..+|+.||++|+||.+||||++.+|||+|+ .|+|+
T Consensus 331 ~---~~~~~l~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~ 394 (473)
T TIGR02095 331 P---ELEEALRELAERYPG--------NVRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIV 394 (473)
T ss_pred H---HHHHHHHHHHHHCCC--------cEEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEE
Confidence 2 345566666654321 2454 345688889999999999999999999999999999994 79999
Q ss_pred eCCCCccccc--C------CceEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 493 SEFAGAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 493 Se~aG~~~~l--g------~~gllVnP~D~~~lA~aI~~aL~m---~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
|..+|..+.+ + .+|++|+|.|+++++++|.++|.+ .++.++++.++.. .+.++|..-++++++-.++
T Consensus 395 s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 395 RRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred ccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 9999999888 4 679999999999999999999873 3344444444433 3679999999988776543
No 27
>PRK14098 glycogen synthase; Provisional
Probab=99.93 E-value=8.6e-24 Score=249.19 Aligned_cols=323 Identities=15% Similarity=0.190 Sum_probs=220.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhC------CCCeEEEEEccCC-----CchhhhccC
Q 002314 207 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPF-----PSSEIHRTL 275 (937)
Q Consensus 207 ~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~------~~~~I~~flH~Pf-----Ps~e~fr~l 275 (937)
|.+....|.-++++.++.+.+.--.+|+||+||||..++|.++++.. .++|++++.|... |...+-..+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44456667777777777665432256999999999999999998653 4789999999852 211110112
Q ss_pred ccc------------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhh
Q 002314 276 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (937)
Q Consensus 276 p~r------------~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~ 343 (937)
|+. .-+-.++..||.|..-++.|++.-......-.|++ .. +..+..++.+||||||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~---~~--l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD---KV--LEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH---HH--HHhcCCCeeEEeCCccccccCCc
Confidence 211 12334667888888888877765322000000110 00 11135688999999999999764
Q ss_pred hcCC--------ch---HHHHHHHHHHhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcC
Q 002314 344 LEIN--------PV---QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (937)
Q Consensus 344 ~~~~--------~~---~~~~~~lr~~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p 407 (937)
.... .. .+....++++++ ++++|++|||+.+.||++.+++|+.++++. + +.|+++|.+
T Consensus 272 ~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvivG~G 345 (489)
T PRK14098 272 TDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVICGSG 345 (489)
T ss_pred ccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEEEeCC
Confidence 2110 00 011234555552 467999999999999999999999998752 2 558878642
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCC
Q 002314 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (937)
Q Consensus 408 ~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~ 487 (937)
+. .+++++++++.+... .|.+ .+.++.+++..+|+.||+||+||.+||||++.+|||+|+
T Consensus 346 -----~~--~~~~~l~~l~~~~~~--------~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G---- 405 (489)
T PRK14098 346 -----DK--EYEKRFQDFAEEHPE--------QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG---- 405 (489)
T ss_pred -----CH--HHHHHHHHHHHHCCC--------CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC----
Confidence 21 244566667655321 3554 577899999999999999999999999999999999993
Q ss_pred ceEEEeCCCCccccc------CCceEEECCCCHHHHHHHHHHHHcC--CHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHH
Q 002314 488 GVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 488 g~lVlSe~aG~~~~l------g~~gllVnP~D~~~lA~aI~~aL~m--~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l 559 (937)
.|+|++..+|..+.+ +.+|++|+|.|+++++++|.+++.+ .++.+.++.++. ..+.++|..-++++++-.
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 689999999988766 3579999999999999999998742 223333333222 236789999999887766
Q ss_pred HHh
Q 002314 560 NDT 562 (937)
Q Consensus 560 ~~~ 562 (937)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 554
No 28
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.92 E-value=2.9e-23 Score=239.78 Aligned_cols=276 Identities=17% Similarity=0.129 Sum_probs=202.5
Q ss_pred CCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEccCCCch-hhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS-EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~~~~I~~flH~PfPs~-e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
..|+||+|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-..+-.+|.|...+....+.+..
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 4699999988776677777663 22446677888642111 1110 01122333345789988877654443321
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHh
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~l 388 (937)
+| ....++.++|+|||.+.|.+.... ...+...|++|||+.+.||++.+|+|+..+
T Consensus 192 -~g-----------~~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 -MG-----------CPPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred -cC-----------CCHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 12 124578899999999988642110 113456799999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002314 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (937)
Q Consensus 389 l~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (937)
.+++|++ .|+++|. ++. ++++++++.+.+. ...+.+.|.++.+++..+|+.||+||+||.
T Consensus 248 ~~~~~~~----~l~ivG~-----G~~----~~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVAF----RYRILGI-----GPW----ERRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCCE----EEEEEEC-----chh----HHHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 8887765 4777763 332 3445555555331 123345899999999999999999999998
Q ss_pred C------cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 469 R------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 469 ~------EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
. |||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++++++++++++.++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 99999999999994 799999999988887 67899999999999999999999966677888888888
Q ss_pred hhh-hcCCHHHHHHHHHHHHH
Q 002314 541 THV-TTHTAQEWAETFVSELN 560 (937)
Q Consensus 541 ~~V-~~~~~~~W~~~fl~~l~ 560 (937)
+++ ..|++...++++.+-++
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHh
Confidence 887 66999999998877654
No 29
>PRK14099 glycogen synthase; Provisional
Probab=99.92 E-value=6.8e-23 Score=241.35 Aligned_cols=318 Identities=20% Similarity=0.216 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CCCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEccC-----CCchhhhcc--Ccc-
Q 002314 209 SQFAAYIKANQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHRT--LPS- 277 (937)
Q Consensus 209 ~~w~~Y~~vN~~fA~~i~~~~--~~~DvVwvHDyhl~llp~~Lr~~-~~~~~I~~flH~P-----fPs~e~fr~--lp~- 277 (937)
+...-|.-++++-.+.+.... ..+||||+||||..++|.+++.. ..+++++++.|.. ||. ..+.. +|.
T Consensus 109 d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~ 187 (485)
T PRK14099 109 DNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPS 187 (485)
T ss_pred cHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChH
Confidence 334445444444333222221 25699999999999999998753 3568899999974 221 11110 111
Q ss_pred -----c-------hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhc
Q 002314 278 -----R-------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE 345 (937)
Q Consensus 278 -----r-------~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~ 345 (937)
+ .-+..++..||.|...++.|++.....- .-.|++ + .+.-+..++.+||||||++.|.+...
T Consensus 188 ~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~-~g~gl~----~-~l~~~~~ki~vI~NGID~~~f~p~~~ 261 (485)
T PRK14099 188 AFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPE-AGMGLD----G-LLRQRADRLSGILNGIDTAVWNPATD 261 (485)
T ss_pred HcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhccc-CCcChH----H-HHHhhCCCeEEEecCCchhhcccccc
Confidence 0 1134456677877777776655433200 000000 0 01113467899999999999976432
Q ss_pred CC-----ch------HHHHHHHHHHhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCC
Q 002314 346 IN-----PV------QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (937)
Q Consensus 346 ~~-----~~------~~~~~~lr~~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r 409 (937)
.. .. ......++++++ +.++|++||||.+.||++.+++|+..+++. + +.|+++|.+
T Consensus 262 ~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~G-- 333 (485)
T PRK14099 262 ELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGSG-- 333 (485)
T ss_pred chhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEecC--
Confidence 10 00 011245666663 356788999999999999999999998753 2 457777642
Q ss_pred CChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH-HHccEEEECCCCcCCChhHHHHHHhcCCCCc
Q 002314 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (937)
Q Consensus 410 ~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g 488 (937)
+ + .+++++++++.+... .+.++.|. .+++..+| +.||+||+||.+||||++.+|||+|+ +
T Consensus 334 -~-~---~~~~~l~~l~~~~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ 394 (485)
T PRK14099 334 -D-A---ELEARFRAAAQAYPG--------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----A 394 (485)
T ss_pred -C-H---HHHHHHHHHHHHCCC--------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----C
Confidence 1 1 244566666654321 24344565 57888877 56999999999999999999999993 5
Q ss_pred eEEEeCCCCccccc--C---------CceEEECCCCHHHHHHHHHHH---HcCCHHHHHHHHHhhhhhhhcCCHHHHHHH
Q 002314 489 VLILSEFAGAAQSL--G---------AGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHNFTHVTTHTAQEWAET 554 (937)
Q Consensus 489 ~lVlSe~aG~~~~l--g---------~~gllVnP~D~~~lA~aI~~a---L~m~~~er~~r~~~~~~~V~~~~~~~W~~~ 554 (937)
|+|+|..+|..+.+ + .+|++|+|.|+++++++|.++ +++ ++.++++.++.+ .+.++|..-+++
T Consensus 395 ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~--~~~fSw~~~a~~ 471 (485)
T PRK14099 395 VPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM--TTDVSWRNPAQH 471 (485)
T ss_pred CcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh--hhcCChHHHHHH
Confidence 88889998988876 2 369999999999999999984 433 344554444443 477999999999
Q ss_pred HHHHHHHhH
Q 002314 555 FVSELNDTV 563 (937)
Q Consensus 555 fl~~l~~~~ 563 (937)
+++-.+++.
T Consensus 472 y~~lY~~l~ 480 (485)
T PRK14099 472 YAALYRSLV 480 (485)
T ss_pred HHHHHHHHH
Confidence 887766553
No 30
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.92 E-value=9.9e-23 Score=234.41 Aligned_cols=289 Identities=19% Similarity=0.199 Sum_probs=212.6
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhc---cCcc--chHHH--HhhhcCCEEEEeCHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLL--RAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr---~lp~--r~eil--~~ll~aDlIgF~t~~~~~~Fl 303 (937)
..|+||+|++...+++.++++. .++|+++++|..++-...+. ..+. ...++ ..+..+|.|.+.+...++.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999997666666666553 46889999997542111110 0111 11222 234578999999987777665
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~ 380 (937)
.. .+ ....++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||+..
T Consensus 180 ~~----~~-----------~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 RH----YD-----------ADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred HH----cC-----------CChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 31 11 1235788999999998886421 11234444 36789999999999999999
Q ss_pred HHHHHHHhHHhCcCccCcEEEEEEEcCCCCCh-hHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~-~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
+++|++++++++|+. ++.|+++|.+.. ++ +.. +++++++.+.+.. ..|. +.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999988873 477888886442 23 222 3445555544321 1355 5789999999999999
Q ss_pred ccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 002314 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (937)
Q Consensus 460 ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (937)
||++++||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++ +++.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~-~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDP-RTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Confidence 999999999999999999999994 789999988888777 56799999999999999999999854 55666777
Q ss_pred hhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 538 ~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
++++.++.++|...++++++-+.++
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7788888899999999988776654
No 31
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.92 E-value=3.1e-23 Score=238.53 Aligned_cols=284 Identities=17% Similarity=0.195 Sum_probs=197.5
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCc--hhh-hc-cCccc--------hH---HHHhhhcCCEEEEeC
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 295 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs--~e~-fr-~lp~r--------~e---il~~ll~aDlIgF~t 295 (937)
.+|+|+.|. .+....++++..|++++..+.|..+-. .+. |. ..+.+ .. ....+-.+|.|...+
T Consensus 87 ~pdvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 459999994 555667788889999988777643311 110 11 11111 11 234566788887766
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEec-
Q 002314 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR- 371 (937)
Q Consensus 296 ~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdR- 371 (937)
......|.. .. ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~----------------~~--~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----------------EL--RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----------------hh--ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 543333221 01 1578899999999988753210 11111111 36788999998
Q ss_pred ccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChh--H-HHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 002314 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP--E-YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (937)
Q Consensus 372 ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~--~-y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v 448 (937)
+.+.||++.+++|+..+.+++|+++ |+++|......+. + -..+++ ++..+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQ---HMLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHH---HHHHHhhcccC---cceEE-EeCCC
Confidence 9999999999999999998888765 7778742211000 0 001111 22222222111 12466 47999
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHc
Q 002314 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (937)
Q Consensus 449 ~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (937)
+.+++.++|+.||++|+||..||+|++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999994 799999998888887 568999999999999999999998
Q ss_pred CCHHHHHHHHHhhhhhhhc-CCHHHHHHHHH
Q 002314 527 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (937)
Q Consensus 527 m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl 556 (937)
++ +++.++.+++++++.+ +++...+++++
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 75 5677788888888866 88888777765
No 32
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.91 E-value=2.9e-22 Score=241.88 Aligned_cols=331 Identities=14% Similarity=0.156 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCC----chh-hhccCc------cc
Q 002314 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SSE-IHRTLP------SR 278 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~-~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfP----s~e-~fr~lp------~r 278 (937)
|.....+....++.+.... ..+|+||.|.+.--+++..++++. ++|..++.|..=. ... .+..+. .+
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 5555566666666655443 357999999988878888887765 7888888886411 111 011010 01
Q ss_pred -hHHHHhhhcCCEEEEeCHHHHHHHHHHHH-----HHhCccc---CCCceeeCCeeeEEEEEecccChhhhhhhhcCCch
Q 002314 279 -SDLLRAVLAADLVGFHTYDYARHFVSACT-----RILGFEG---TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 349 (937)
Q Consensus 279 -~eil~~ll~aDlIgF~t~~~~~~Fl~~~~-----r~lg~~~---~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~ 349 (937)
..=+..|-.||.|.-.|+.-...-...+. ..+.... .-+++. ....++.++|+|+|++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid--~~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGID--VFDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCcc--CCcCCeEEECCCcChhhcCCCCchhhh
Confidence 00125677799998877632111001110 0001000 001111 123488999999999999764321100
Q ss_pred -HHHH----------HHHHHHh-----cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCC---
Q 002314 350 -QVHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 410 (937)
Q Consensus 350 -~~~~----------~~lr~~~-----~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~--- 410 (937)
.... ...++.+ .++++|++|||+++.||+..+++||.++.+..+ .+.||++|++...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCcccccc
Confidence 0000 0112333 367899999999999999999999987644333 4668888864321
Q ss_pred ChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHH----HccEEEECCCCcCCChhHHHHHHhcCC
Q 002314 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 485 (937)
Q Consensus 411 ~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~-v~~~el~aly~----~ADv~vv~Sl~EG~nLv~~EamAc~~~ 485 (937)
...+..+..+++.+++.+.+ ..+ .|.| .|. .+..++..+|+ .+||||+||.+||||||++|||||+
T Consensus 597 ~d~ee~~~i~~L~~la~~~g----L~g--~V~f-lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG-- 667 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQ----LHG--QIRW-IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG-- 667 (784)
T ss_pred cchhHHHHHHHHHHHHHHhC----CCC--eEEE-ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC--
Confidence 11122233455666665543 222 4665 454 35566666665 2479999999999999999999994
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHH
Q 002314 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (937)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l 559 (937)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++ ..++.+.++..+++++| +.|+|...++++++..
T Consensus 668 --lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 668 --LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 778999999999999999999874 24456666777778776 7799999999987654
No 33
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.91 E-value=1.7e-22 Score=237.80 Aligned_cols=313 Identities=22% Similarity=0.249 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhC-----CCCeEEEEEccCCCch----hhhcc--Ccc--
Q 002314 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS-- 277 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~-----~~~~I~~flH~PfPs~----e~fr~--lp~-- 277 (937)
...|...++...+.+.+.-..+|+||+||+|..++|.+++... .+.|++|+.|.+.+.. ..+.. +++
T Consensus 109 ~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 109 AERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 4445555666656555544567999999999999999998763 5889999999874321 11110 111
Q ss_pred ------------chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCcee--eCCeeeEEEEEecccChhhhhhh
Q 002314 278 ------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRA 343 (937)
Q Consensus 278 ------------r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~--~~gr~~~i~v~P~GID~~~f~~~ 343 (937)
..-+..++..||.|...++.+++...+. .. ..+++ ...+..++.++|||||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 0123345667788777777666654321 00 00110 11234689999999999988764
Q ss_pred hcCC-----------chHHHHHHHHHHh-----cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcC
Q 002314 344 LEIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (937)
Q Consensus 344 ~~~~-----------~~~~~~~~lr~~~-----~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p 407 (937)
.... .-......+++++ .++++|+++||+.+.||++.+++|++++.++. +.|+++|.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 334 (476)
T cd03791 261 TDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG 334 (476)
T ss_pred ccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC
Confidence 3211 0112234466665 36789999999999999999999999987643 457777642
Q ss_pred CCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCC
Q 002314 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (937)
Q Consensus 408 ~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~ 487 (937)
+ + .+.+++++++.+.. ..++++.+ .+.+++..+|+.||++|+||.+||||++.+|||+|+
T Consensus 335 ---~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G---- 394 (476)
T cd03791 335 ---D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG---- 394 (476)
T ss_pred ---C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----
Confidence 1 2 23455566655431 13565544 457778899999999999999999999999999994
Q ss_pred ceEEEeCCCCccccc--CC------ceEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHhhhhhhhcCCHHHHHHHHHH
Q 002314 488 GVLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (937)
Q Consensus 488 g~lVlSe~aG~~~~l--g~------~gllVnP~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~V~~~~~~~W~~~fl~ 557 (937)
.|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++++.++.++..+ ..++|..-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 799999999999888 44 899999999999999999998643 3344444444333 45888888888876
Q ss_pred HH
Q 002314 558 EL 559 (937)
Q Consensus 558 ~l 559 (937)
.+
T Consensus 473 ~y 474 (476)
T cd03791 473 LY 474 (476)
T ss_pred HH
Confidence 54
No 34
>PLN00142 sucrose synthase
Probab=99.91 E-value=4e-22 Score=240.71 Aligned_cols=331 Identities=15% Similarity=0.124 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccC-----------CCchh-hhccC-c
Q 002314 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP-----------FPSSE-IHRTL-P 276 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~-~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~P-----------fPs~e-~fr~l-p 276 (937)
|..-..++...++.+.... ..+|+||-|++.--+++..|+++. ++|.+++.|.- |...+ .++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 6666666666666664433 357999999877778888888765 89999999952 11000 11100 0
Q ss_pred cchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCc-ccC-C------CceeeCCeeeEEEEEecccChhhhhhhhcCC-
Q 002314 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGF-EGT-P------EGVEDQGRLTRVAAFPIGIDSERFIRALEIN- 347 (937)
Q Consensus 277 ~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~-~~~-~------~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~- 347 (937)
...| ...|..||.|.-.|+.-....-..+..+-.. ..+ + .++.+. ..++.++|+|+|...|.+.....
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 0011 2245566666544432111000000000000 000 0 111111 23788999999999987532110
Q ss_pred -------chHHHH---HHHHHHh-----cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCC-CCC
Q 002314 348 -------PVQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT-RTD 411 (937)
Q Consensus 348 -------~~~~~~---~~lr~~~-----~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~-r~~ 411 (937)
.+.+.. ...++.+ .++++|++|||+++.||+..+++||.++.+..++ +.|+++|++. ...
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccc
Confidence 000000 0011222 2567999999999999999999999988665554 5588887541 111
Q ss_pred --hhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC---CCCCHHHHHHHHH-HccEEEECCCCcCCChhHHHHHHhcCC
Q 002314 412 --VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDL 485 (937)
Q Consensus 412 --~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~---~~v~~~el~aly~-~ADv~vv~Sl~EG~nLv~~EamAc~~~ 485 (937)
..+..+..+++.+++.+.+ ..+ .|.|+. +..+.++++.+|+ ++|+||+||.+||||+|++|||||+
T Consensus 619 s~d~ee~~el~~L~~La~~lg----L~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~G-- 690 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYN----LKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCG-- 690 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcC----CCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcC--
Confidence 1111122244556665543 222 355532 2445678888777 5799999999999999999999994
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHH
Q 002314 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (937)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~---m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l 559 (937)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++|. ..++.+.++.+++++.+ +.|+|...++++++-.
T Consensus 691 --lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 691 --LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 799999999999888 778999999999999999988753 34566777777888887 7799999999887744
No 35
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.90 E-value=9.6e-22 Score=224.29 Aligned_cols=287 Identities=22% Similarity=0.204 Sum_probs=204.8
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhc-----cCccchH-HHHhhhcCCEEEEeCHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----TLPSRSD-LLRAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr-----~lp~r~e-il~~ll~aDlIgF~t~~~~~~Fl 303 (937)
...|+||+|++...+.+.++++ ..+.|+.+++|..+|...+.. ....... ....+..+|.|.+.+....+.+.
T Consensus 82 ~~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~ 160 (388)
T TIGR02149 82 VDADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDIL 160 (388)
T ss_pred CCCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHH
Confidence 3579999999887766665544 458899999998655321100 0000111 12334568888888776655554
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~ 380 (937)
.. .-+ -...++.++|+|+|++.|.+.. ...+++++ .++++|+++||+.+.||+..
T Consensus 161 ~~---~~~-----------~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~ 218 (388)
T TIGR02149 161 KY---YPD-----------LDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPH 218 (388)
T ss_pred HH---cCC-----------CCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHH
Confidence 31 001 1235788999999998876421 12234444 35679999999999999999
Q ss_pred HHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 002314 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (937)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (937)
+++|++++. ++ +.|+++|.+. +.+ ++.+++++++..++... ..|+++.+.++.+++..+|+.|
T Consensus 219 li~a~~~l~---~~----~~l~i~g~g~--~~~---~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 219 LLDAVHYIP---KD----VQVVLCAGAP--DTP---EVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred HHHHHHHHh---hc----CcEEEEeCCC--CcH---HHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhC
Confidence 999999873 33 3366555322 112 34455555555443211 2477778899999999999999
Q ss_pred cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCH------HHHHHHHHHHHcCCHHHH
Q 002314 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEER 532 (937)
Q Consensus 461 Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~------~~lA~aI~~aL~m~~~er 532 (937)
|++|+||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|++|+|.|. ++++++|.++++. ++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~ 356 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELA 356 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHH
Confidence 99999999999999999999994 799999998888877 567999999998 9999999999985 4566
Q ss_pred HHHHHhhhhhh-hcCCHHHHHHHHHHHHHH
Q 002314 533 EKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (937)
Q Consensus 533 ~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 561 (937)
.++..++++.+ +.++|..+++++++.+++
T Consensus 357 ~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 357 KKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 77777777776 679999999999877764
No 36
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.90 E-value=7.9e-22 Score=231.90 Aligned_cols=277 Identities=18% Similarity=0.204 Sum_probs=197.9
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc-h---HHHHh-hhcCCEEEEeCHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRA-VLAADLVGFHTYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r-~---eil~~-ll~aDlIgF~t~~~~~~Fl~~ 305 (937)
..|+||+|+...+.++.++-.+..++|+++.+|.-+|.........+. + .+.+. ...+|.|...+....+.|..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 469999998766655554433344788988888765432100011110 0 11121 22578888877766555442
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh----cCCcEEEEEecccccCCHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~iIL~VdRld~~KGi~~~ 381 (937)
.+. ....++.++|+|||.+.|.+.... ..+++++ .++++|+++||+.+.||+..+
T Consensus 223 ----~~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ----AGV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ----cCC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 010 113578899999999988654221 1233333 367899999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|++++ |++ .|+++| +++. ++++++++.. .+|+| .|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~~----~l~ivG-----~G~~----~~~l~~~~~~----------~~V~f-~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PGA----RLAFVG-----DGPY----REELEKMFAG----------TPTVF-TGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CCc----EEEEEe-----CChH----HHHHHHHhcc----------CCeEE-eccCCHHHHHHHHHHCC
Confidence 9988764 544 477776 3333 2345555432 14664 79999999999999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (937)
+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++++ +.++++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADP-ELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHH
Confidence 9999999999999999999994 799999998888776 35799999999999999999999854 5677778
Q ss_pred HhhhhhhhcCCHHHHHHHHHHH-HHHh
Q 002314 537 WHNFTHVTTHTAQEWAETFVSE-LNDT 562 (937)
Q Consensus 537 ~~~~~~V~~~~~~~W~~~fl~~-l~~~ 562 (937)
+++++++++|+|...+++++.. ...+
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 8888899999999999999874 4444
No 37
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.90 E-value=1.5e-21 Score=222.38 Aligned_cols=297 Identities=20% Similarity=0.221 Sum_probs=208.9
Q ss_pred HHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhh--hcc---Ccc-ch-HHHHhhhcCCEEEE
Q 002314 221 FADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI--HRT---LPS-RS-DLLRAVLAADLVGF 293 (937)
Q Consensus 221 fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~--fr~---lp~-r~-eil~~ll~aDlIgF 293 (937)
+...+.+....+|+|++|++....++..+++. .++|+.++.|........ ... .+. +. .....+..+|.|.+
T Consensus 91 ~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~ 169 (398)
T cd03800 91 LLRFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIA 169 (398)
T ss_pred HHHHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEE
Confidence 33344443336799999998777777666554 478899999975432110 000 000 11 11234457899998
Q ss_pred eCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEeccc
Q 002314 294 HTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD 373 (937)
Q Consensus 294 ~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld 373 (937)
.+......+.. .. .....++.++|+|+|.+.|.+.... ......+. ...++.+|+++||++
T Consensus 170 ~s~~~~~~~~~----~~-----------~~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~ 230 (398)
T cd03800 170 STPQEAEELYS----LY-----------GAYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLD 230 (398)
T ss_pred cCHHHHHHHHH----Hc-----------cccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccc
Confidence 88866655543 11 1123357899999999887653211 01111111 114678999999999
Q ss_pred ccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHH
Q 002314 374 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPAL 453 (937)
Q Consensus 374 ~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el 453 (937)
+.||+..+++|+..+.+++|++ .|+++|.......+ ....++++++.+.+. . ..|. +.|.++.+++
T Consensus 231 ~~k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~~~~~~---~~~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~ 296 (398)
T cd03800 231 PRKGIDTLIRAYAELPELRERA----NLVIVGGPRDDILA---MDEEELRELARELGV----I--DRVD-FPGRVSREDL 296 (398)
T ss_pred cccCHHHHHHHHHHHHHhCCCe----EEEEEECCCCcchh---hhhHHHHHHHHhcCC----C--ceEE-EeccCCHHHH
Confidence 9999999999999998887765 47778754322211 223345555554332 1 1355 5799999999
Q ss_pred HHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHH
Q 002314 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (937)
Q Consensus 454 ~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 531 (937)
..+|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ ++
T Consensus 297 ~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~ 371 (398)
T cd03800 297 PALYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP-AL 371 (398)
T ss_pred HHHHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH-HH
Confidence 999999999999999999999999999994 789999999988888 45799999999999999999999864 56
Q ss_pred HHHHHHhhhhhh-hcCCHHHHHHHHH
Q 002314 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (937)
Q Consensus 532 r~~r~~~~~~~V-~~~~~~~W~~~fl 556 (937)
+.++..++++++ +.++++..+++++
T Consensus 372 ~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 372 RRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 777777888887 8899999998875
No 38
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.90 E-value=5.7e-22 Score=233.67 Aligned_cols=283 Identities=19% Similarity=0.156 Sum_probs=198.8
Q ss_pred HHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch---hhhcc---CccchH--------HH-HhhhcC
Q 002314 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LL-RAVLAA 288 (937)
Q Consensus 224 ~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~---e~fr~---lp~r~e--------il-~~ll~a 288 (937)
.+...+.+.|+||+|......++..+..+..+.|+.++.|--++.. +++.. .+..+. +. ..+..|
T Consensus 166 ~l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 245 (475)
T cd03813 166 AIARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAA 245 (475)
T ss_pred HhccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555566789999998665544554444455899999999765521 22211 000011 11 112356
Q ss_pred CEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEE
Q 002314 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLG 368 (937)
Q Consensus 289 DlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~ 368 (937)
|.|...+........ .++....++.++|+|||.+.|.+.... ....++++|++
T Consensus 246 d~Ii~~s~~~~~~~~----------------~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~ 298 (475)
T cd03813 246 DRITTLYEGNRERQI----------------EDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGL 298 (475)
T ss_pred CEEEecCHHHHHHHH----------------HcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEE
Confidence 666655443222111 112234578899999999988653210 11246789999
Q ss_pred EecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 002314 369 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (937)
Q Consensus 369 VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v 448 (937)
+||+.+.||+..+|+|+..+.++.|+++ |+++|... ..+ .+.+++++++++.+.. ..|+| .|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~--~~~---~~~~e~~~li~~l~l~------~~V~f-~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD--EDP---EYAEECRELVESLGLE------DNVKF-TG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC--cCh---HHHHHHHHHHHHhCCC------CeEEE-cC--
Confidence 9999999999999999999988888754 77776321 112 3456777777765531 14665 55
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCC--------ceEEECCCCHHHHHHH
Q 002314 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANA 520 (937)
Q Consensus 449 ~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~--------~gllVnP~D~~~lA~a 520 (937)
.+++..+|+.||++|+||..|||+++++|||||+ .|+|+|+.+|+.+.+.. +|++|+|.|++++|++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 5789999999999999999999999999999994 78999999888877733 7999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhhhhhc-CCHHHHHHHHHH
Q 002314 521 IARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVS 557 (937)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~ 557 (937)
|.++++++ +.+.++.+++++++++ +++...+++|.+
T Consensus 436 i~~ll~~~-~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 436 ILRLLKDP-ELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999864 5677777888887755 577887777765
No 39
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.90 E-value=1.7e-21 Score=224.27 Aligned_cols=278 Identities=14% Similarity=0.168 Sum_probs=196.2
Q ss_pred CCCEEEEeCcccchH-HHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHH-hhhcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~ll-p~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~-~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
..|+||+|+++..+. ...+..+..++|++++.|..|+..+.... +...+.+ .+-.+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999775433 23333334578999999987653322111 1112222 2346888888887655544321
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHh
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~l 388 (937)
. .....++.++|+|+|.+.|.+.... ...++++|+++||+.+.||+..+++|+..+
T Consensus 163 -~-----------~~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 -A-----------SLDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred -h-----------CCChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 0 1124578899999999988653110 124678999999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002314 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (937)
Q Consensus 389 l~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (937)
.++.|+++ |+++|. ++.. +++++++.+.+ ..+ .|.+ .|.++.+++..+|+.||++|+||.
T Consensus 219 ~~~~~~~~----l~i~G~-----g~~~----~~l~~~~~~~~----l~~--~v~~-~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNVR----FIIGGD-----GPKR----ILLEEMREKYN----LQD--RVEL-LGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCEE----EEEEeC-----CchH----HHHHHHHHHhC----CCC--eEEE-eCCCCHHHHHHHHHhCCEEEeCCh
Confidence 88888754 777763 3333 33444554432 111 3664 689999999999999999999999
Q ss_pred CcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCc-eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh-hhcC
Q 002314 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (937)
Q Consensus 469 ~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~-gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-V~~~ 546 (937)
.||||++++|||||+ .|+|+|..+|..+.+..+ +++++| |.++++++|.+++.++.+. .....++++. .+.+
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~-~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILRTG-KHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChhhh-hhHHHHHHHHHHhhC
Confidence 999999999999994 799999999988877433 445544 9999999999999876433 3344555554 4779
Q ss_pred CHHHHHHHHHHHHHHhH
Q 002314 547 TAQEWAETFVSELNDTV 563 (937)
Q Consensus 547 ~~~~W~~~fl~~l~~~~ 563 (937)
++..-++++++.++...
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999988877654
No 40
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.89 E-value=1.6e-22 Score=211.47 Aligned_cols=194 Identities=22% Similarity=0.362 Sum_probs=146.2
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCceEE
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~i 672 (937)
||++||||||++.. ...++++++++|++|+++ +..|+|+|||+...+.+++..++.++|++||+++
T Consensus 1 li~~D~DgTL~~~~-------------~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDPN-------------AHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 68999999999852 245889999999999985 6999999999999999999888889999999999
Q ss_pred EecCC-eeeeccccccChhHH---HHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCC-
Q 002314 673 RCTTG-KWMTTMPEHLNMEWV---DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 747 (937)
Q Consensus 673 r~~~~-~w~~~~~~~~~~~w~---~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~- 747 (937)
+..++ .|.. +......|. +.+..++..+...+++..+|.+...+.+||+..... .....++...+ .....
T Consensus 67 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELG--QELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchh--hHHHHHHHHHH-Hhhccc
Confidence 86443 2432 111111121 233444555556778888899999999999875111 11223344444 33221
Q ss_pred CCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 748 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 748 ~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
...+.+. .+..++||+|++++||.|++.++++++ ++.+++++||| +.||++||+.++.
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~ 200 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGL 200 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCC
Confidence 2457777 689999999999999999999999987 56899999999 9999999999865
No 41
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.89 E-value=5.7e-21 Score=217.32 Aligned_cols=232 Identities=16% Similarity=0.164 Sum_probs=172.7
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCc
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 364 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 364 (937)
.+|.+...+....+.+.. .++ ....++.++|+|||.+.|.+.... .....++.+ .++.
T Consensus 136 ~~~~~i~vs~~~~~~~~~----~~~-----------~~~~~~~vi~ngvd~~~~~~~~~~-----~~~~~~~~~~~~~~~ 195 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRG----PVK-----------VPPAKIHQIYNGVDTERFHPSRGD-----RSPILPPDFFADESV 195 (374)
T ss_pred cCCeEEEeCHHHHHHHHH----hcC-----------CChhhEEEeccCccccccCCCccc-----hhhhhHhhcCCCCCe
Confidence 367777777765554433 111 123567889999999888643211 111112222 3577
Q ss_pred EEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 002314 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (937)
Q Consensus 365 iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 444 (937)
+|+++||+++.||+..+++|+..+++++|+...++.|+++|. ++.. +++++++.+.+. ...+++
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~----~~~~~~~~~~~~-------~~~v~~ 259 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPAR----GACEQMVRAAGL-------AHLVWL 259 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchH----HHHHHHHHHcCC-------cceEEE
Confidence 999999999999999999999999999887655678888863 2322 334444444331 233445
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHH
Q 002314 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 522 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~ 522 (937)
.|. .+++..+|+.||++|+||..||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.
T Consensus 260 ~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~ 333 (374)
T TIGR03088 260 PGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333 (374)
T ss_pred cCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 664 5789999999999999999999999999999994 799999998888887 56799999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHH
Q 002314 523 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (937)
Q Consensus 523 ~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~ 561 (937)
++++++ +++..+.+++++++ ..|++...++++++.+++
T Consensus 334 ~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 334 PYVSDP-AARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999854 56677777888887 689999999988776654
No 42
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=8.9e-21 Score=214.07 Aligned_cols=275 Identities=16% Similarity=0.113 Sum_probs=195.4
Q ss_pred HHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch--hhhccCcc--chHHH-HhhhcCCEEEEeCHHHH
Q 002314 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRTLPS--RSDLL-RAVLAADLVGFHTYDYA 299 (937)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~--e~fr~lp~--r~eil-~~ll~aDlIgF~t~~~~ 299 (937)
+.+..+ .|+||+|+.+..+....+.+ ..++|+.+.+|...... ....+.++ ...+. ..+..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 444445 49999997664444433333 24788888888532111 11111011 11222 22346799888887555
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHH
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~ 379 (937)
+.+... + ....++.++|+|+|.+.|.+... ..++++++++||+.+.||++
T Consensus 155 ~~~~~~-----~-----------~~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLAL-----G-----------FPPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHHc-----C-----------CCHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 544431 1 12357889999999988764211 12467899999999999999
Q ss_pred HHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
.+++|+..+.+++|++ .|+++|. ++. .+++++++.+.+. . ..|+ +.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~~----~l~ivG~-----g~~----~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPEV----RLVIIGD-----GPL----LAALEALARALGL----G--GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeC-----chH----HHHHHHHHHHcCC----C--CeEE-ECCCCCHHHHHHHHHh
Confidence 9999999998888865 4777763 232 2345555554321 1 1355 5789999999999999
Q ss_pred ccEEEECCC------CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHH
Q 002314 460 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (937)
Q Consensus 460 ADv~vv~Sl------~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 531 (937)
||++|+||. .||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP-DL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH-HH
Confidence 999999997 599999999999994 799999999988877 56899999999999999999999854 46
Q ss_pred HHHHHHhhhhhh-hcCCHHHHHHHHH
Q 002314 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (937)
Q Consensus 532 r~~r~~~~~~~V-~~~~~~~W~~~fl 556 (937)
+.++..++++++ +.++|..+++++.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 667777888877 6799999988765
No 43
>PLN02949 transferase, transferring glycosyl groups
Probab=99.88 E-value=3.1e-20 Score=217.10 Aligned_cols=315 Identities=16% Similarity=0.155 Sum_probs=210.3
Q ss_pred hhhhhccccccCCCCCCccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCccc-chHHHHHHhhCCCCeE
Q 002314 180 GYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHL-MFLPKCLKEYNSDMKV 258 (937)
Q Consensus 180 gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl-~llp~~Lr~~~~~~~I 258 (937)
.+-..-+||-||-+.. .+...|-++..+.+ +. |.|||----. +-+| ++| ....||
T Consensus 108 ~~~~~~~~~~~t~~~~----------~~~~~~l~~~~~~~---------~~--p~v~vDt~~~~~~~p-l~~--~~~~~v 163 (463)
T PLN02949 108 KWIEEETYPRFTMIGQ----------SLGSVYLAWEALCK---------FT--PLYFFDTSGYAFTYP-LAR--LFGCKV 163 (463)
T ss_pred cccccccCCceehHHH----------HHHHHHHHHHHHHh---------cC--CCEEEeCCCcccHHH-HHH--hcCCcE
Confidence 3446667887775520 22334655554443 12 3578743221 1122 333 237899
Q ss_pred EEEEccCCCchhhhccCcc-------------------chHH-------H--HhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 259 GWFLHTPFPSSEIHRTLPS-------------------RSDL-------L--RAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 259 ~~flH~PfPs~e~fr~lp~-------------------r~ei-------l--~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
++.+|.|.-+.+....+-. .+.+ + ..+-.+|.|...+....+++.+ ..
T Consensus 164 ~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~ 239 (463)
T PLN02949 164 VCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LW 239 (463)
T ss_pred EEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----Hc
Confidence 9999988666544332200 0000 1 1124578777766654444432 11
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
+...++.++++|+|.+.|..... ....++.++++|||+.+.||+..+|+||.++++
T Consensus 240 ------------~~~~~i~vvyp~vd~~~~~~~~~------------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~ 295 (463)
T PLN02949 240 ------------RIPERIKRVYPPCDTSGLQALPL------------ERSEDPPYIISVAQFRPEKAHALQLEAFALALE 295 (463)
T ss_pred ------------CCCCCeEEEcCCCCHHHcccCCc------------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHH
Confidence 11236778999999877632110 011356789999999999999999999999887
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (937)
+.++-..++.|+++|.... ++..++.+++++++.+.+- .+ .|.| .+.++.+++..+|+.||++|.||..|
T Consensus 296 ~~~~~~~~~~LvIvG~~~~---~~~~~~~~eL~~la~~l~L----~~--~V~f-~g~v~~~el~~ll~~a~~~v~~s~~E 365 (463)
T PLN02949 296 KLDADVPRPKLQFVGSCRN---KEDEERLQKLKDRAKELGL----DG--DVEF-HKNVSYRDLVRLLGGAVAGLHSMIDE 365 (463)
T ss_pred hccccCCCcEEEEEeCCCC---cccHHHHHHHHHHHHHcCC----CC--cEEE-eCCCCHHHHHHHHHhCcEEEeCCccC
Confidence 5432222355888875421 1122334566666665432 11 3665 68999999999999999999999999
Q ss_pred CCChhHHHHHHhcCCCCceEEEeCCCCccc-cc-----CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 471 G~nLv~~EamAc~~~~~g~lVlSe~aG~~~-~l-----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
|||++++|||||+ .|+|++..+|..+ .+ |.+|++++ |++++|++|.++++++++++.++.+++++.++
T Consensus 366 ~FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~ 439 (463)
T PLN02949 366 HFGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRAN 439 (463)
T ss_pred CCChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999999994 6899999888653 33 34688874 99999999999999887888888888899999
Q ss_pred cCCHHHHHHHHHHHHHHh
Q 002314 545 THTAQEWAETFVSELNDT 562 (937)
Q Consensus 545 ~~~~~~W~~~fl~~l~~~ 562 (937)
+|+++.-++++++.+...
T Consensus 440 ~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 440 RFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred HcCHHHHHHHHHHHHHHH
Confidence 999999999888777654
No 44
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.87 E-value=2e-20 Score=209.68 Aligned_cols=280 Identities=20% Similarity=0.255 Sum_probs=196.9
Q ss_pred HHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHh-hhcCCEEEEeCHHHHHHHHH
Q 002314 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 226 ~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~-ll~aDlIgF~t~~~~~~Fl~ 304 (937)
++..+ +|+||+|.+|..++..+++...+..++....|...+... + +..+.+. ...++.+...+....+.|+.
T Consensus 75 ~~~~~-pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~-~-----~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 147 (360)
T cd04951 75 LRQFK-PDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR-L-----RMLAYRLTDFLSDLTTNVSKEALDYFIA 147 (360)
T ss_pred HHhcC-CCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH-H-----HHHHHHHHhhccCceEEEcHHHHHHHHh
Confidence 33444 589999999988888888777777888888886432111 0 0111111 11244554455544444433
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~ 381 (937)
.. .-...++.++|+|+|...|.+.. .....+++++ .++++++++||+.+.||+..+
T Consensus 148 ~~---------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~l 206 (360)
T cd04951 148 SK---------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNL 206 (360)
T ss_pred cc---------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHH
Confidence 10 01235788999999998875421 1233455554 367889999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|+.++.+++|+++ |+++|. ++.. +++.+.+.+.+.. ..|.+ .|.. +++..+|+.||
T Consensus 207 i~a~~~l~~~~~~~~----l~i~G~-----g~~~----~~~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~ad 264 (360)
T cd04951 207 LKAFAKLLSDYLDIK----LLIAGD-----GPLR----ATLERLIKALGLS------NRVKL-LGLR--DDIAAYYNAAD 264 (360)
T ss_pred HHHHHHHHhhCCCeE----EEEEcC-----CCcH----HHHHHHHHhcCCC------CcEEE-eccc--ccHHHHHHhhc
Confidence 999999988887754 777753 2222 2333444443321 13554 5543 68899999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
++++||..||||++++|||||+ .|+|+|+.+|..+.+..+|++++|.|+++++++|.++++++++.+..+..+...
T Consensus 265 ~~v~~s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~ 340 (360)
T cd04951 265 LFVLSSAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRER 340 (360)
T ss_pred eEEecccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999994 799999998888888668999999999999999999998777666666555233
Q ss_pred hhhcCCHHHHHHHHHHHH
Q 002314 542 HVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 542 ~V~~~~~~~W~~~fl~~l 559 (937)
..+.+++..+++++++-+
T Consensus 341 ~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 341 IVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHhcCHHHHHHHHHHHh
Confidence 458899999999887654
No 45
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.87 E-value=2.2e-20 Score=213.31 Aligned_cols=283 Identities=17% Similarity=0.145 Sum_probs=190.3
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHH---------HhhhcCCEEEEeCHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL---------RAVLAADLVGFHTYDYAR 300 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil---------~~ll~aDlIgF~t~~~~~ 300 (937)
...|+|++|+..... + +++... ..++.++.|.| .........+.+.+. ..+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 467999999866432 2 233323 38899999954 221111001111111 113357887776664443
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHH
Q 002314 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 301 ~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~ 380 (937)
.+.. .++. .....+.++|+|||.+.|.+..... .........++.+|+++||+.+.||++.
T Consensus 168 ~~~~----~~~~----------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPS----------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhcc----------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 1110 0112335889999998886532110 0011112256788999999999999999
Q ss_pred HHHHHHHhHHhC---cCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHH-hhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002314 381 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 456 (937)
Q Consensus 381 ~l~Af~~ll~~~---P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~-IN~~~g~~~~~pV~~~~~~v~~~el~al 456 (937)
+|+|++++.++. |+ +.|+++|.+.. ...+..++.+++++++.+ .+. . ..|+| .|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l----~--~~V~f-~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDP-RVAENVEYLEELQRLAEELLLL----E--DQVIF-LPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCC-CCchhHHHHHHHHHHHHHhcCC----C--ceEEE-eCCCChHHHHHH
Confidence 999999998876 55 45877775321 112222345566666654 321 1 24664 789999999999
Q ss_pred HHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHH
Q 002314 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (937)
Q Consensus 457 y~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~ 534 (937)
|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++| |.+++|++|.++++++ +++.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHH
Confidence 999999999999999999999999994 799999988888877 457999987 9999999999999876 46677
Q ss_pred HHHhhhhhh-hcCCHHHHHHH
Q 002314 535 RHWHNFTHV-TTHTAQEWAET 554 (937)
Q Consensus 535 r~~~~~~~V-~~~~~~~W~~~ 554 (937)
+.+++++++ ..+++...+++
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 777888876 66888887765
No 46
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.87 E-value=1.3e-20 Score=218.71 Aligned_cols=273 Identities=18% Similarity=0.165 Sum_probs=184.1
Q ss_pred CCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccC-------------ccch--HH-------------HH
Q 002314 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-------------LR 283 (937)
Q Consensus 232 ~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~l-------------p~r~--ei-------------l~ 283 (937)
+|+|..|--+... -.+.+..+++|+++.+|-|.-+++.+..+ ..+. .+ .-
T Consensus 108 pDv~i~~~g~~~~--~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFT--YPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccH--HHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 5865555322222 23444566889999999553344544221 1111 01 11
Q ss_pred hhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCC
Q 002314 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (937)
Q Consensus 284 ~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (937)
.+-.||.|...+.....+|.+ .. +...++.++++|+|.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~------------~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LW------------KRNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----Hh------------CcCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 233678777776644444432 11 11236789999999988754211 012356
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHHhCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
.+|+++||+.+.||+..+|+||..+.+..|+.. .++.|+++|....... .++.+++++++.+.+.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~---~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDD---EKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCccc---HHHHHHHHHHHHHhCCC------CeEE
Confidence 799999999999999999999999998887521 2466888875321111 23456677777665421 1366
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccc-cc-----CCceEEECCCCHHH
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 516 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~-~l-----g~~gllVnP~D~~~ 516 (937)
| .+.++.+++..+|+.||++|.||..||||++++|||||+ .|+|+|..+|..+ .+ |.+|++++ |+++
T Consensus 309 f-~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 F-VVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred E-ecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 4 789999999999999999999999999999999999994 6888998777654 33 45799974 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHH
Q 002314 517 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (937)
Q Consensus 517 lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 550 (937)
+|++|.++++++++++..+.++.++..++|++..
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 9999999999987666655444445456676654
No 47
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.87 E-value=8.9e-20 Score=206.24 Aligned_cols=277 Identities=16% Similarity=0.167 Sum_probs=194.1
Q ss_pred CCCEEEEeCcccchHHHHHHhhC---CCCeEEEEEccCCCchhhhccCcc-chHHHHhhhcCCEEEEeCHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPS-RSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~---~~~~I~~flH~PfPs~e~fr~lp~-r~eil~~ll~aDlIgF~t~~~~~~Fl~~~ 306 (937)
.+|+||+|++....++.++..+. .+.++.+++|..-.. ....-+. +.-+...+..+|.|.+.+......+...+
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 161 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYELF 161 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHhc
Confidence 46999999876555555544322 268888888853111 0111111 12233445578999999887666554311
Q ss_pred HHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHH
Q 002314 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 383 (937)
Q Consensus 307 ~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~ 383 (937)
+...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 162 ----------------~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 162 ----------------DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred ----------------CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 12346789999999887754211 1223333 36788999999999999999999
Q ss_pred HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002314 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (937)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (937)
|+..+.++ ++ +.|+++|.+ ++.. ++++++.+.+. . ..|.+ .|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~----~~~~~~~~~~~----~--~~v~~-~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERS----PAERLARELGL----Q--DDVLF-LGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHH----HHHHHHHHcCC----C--ceEEE-ecCc--ccHHHHHHhcCEE
Confidence 99988655 33 346666532 2222 33344443321 1 13665 4544 5799999999999
Q ss_pred EECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 464 vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
|+||..||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.++++++ +++.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 99999999999999999994 799999999988877 56899999999999999999999854 566667777787
Q ss_pred h-hhcCCHHHHHHHHHHHHHH
Q 002314 542 H-VTTHTAQEWAETFVSELND 561 (937)
Q Consensus 542 ~-V~~~~~~~W~~~fl~~l~~ 561 (937)
+ ...|++...++++++-+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5789999999988876653
No 48
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.87 E-value=4.7e-20 Score=214.13 Aligned_cols=289 Identities=11% Similarity=0.028 Sum_probs=189.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeE-EEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I-~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
..|+||.|++...+++.+..... .+|+ +...|. ++....-+.+- ++ ...+..++++.-.+. ++.+.....+.+
T Consensus 280 rpDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~-~e--~~~~~~a~~i~~~sd-~v~~s~~v~~~l 353 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFK-PE--YEPLYQALAVVPGVD-FMSNNHCVTRHY 353 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHH-HH--HHHhhhhceeEecch-hhhccHHHHHHH
Confidence 45999999999877766665544 4555 455675 32211001000 00 012333445433332 332222211211
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCHHHHHHHHHHh
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi~~~l~Af~~l 388 (937)
.. .+.-...+|.+||||||++.|.+....+ ......++..+ .+..+|++|+|+.+.||...+|+|+.++
T Consensus 354 ~~--------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~l 423 (578)
T PRK15490 354 AD--------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARY 423 (578)
T ss_pred HH--------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHH
Confidence 10 0112457899999999999887642111 11112222223 2456888999999999999999999999
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002314 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (937)
Q Consensus 389 l~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (937)
+++.|+++ |+++| +++. ++++++++.+.+. . ..|+| .|. .+++..+|+.||+||+||.
T Consensus 424 lk~~pdir----LvIVG-----dG~~----~eeLk~la~elgL----~--d~V~F-lG~--~~Dv~~~LaaADVfVlPS~ 481 (578)
T PRK15490 424 LQHHPATR----FVLVG-----DGDL----RAEAQKRAEQLGI----L--ERILF-VGA--SRDVGYWLQKMNVFILFSR 481 (578)
T ss_pred HhHCCCeE----EEEEe-----Cchh----HHHHHHHHHHcCC----C--CcEEE-CCC--hhhHHHHHHhCCEEEEccc
Confidence 99888754 77776 3332 3455555555432 1 13665 565 4689999999999999999
Q ss_pred CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHhhhhhh-
Q 002314 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHV- 543 (937)
Q Consensus 469 ~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~V- 543 (937)
+||||++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. ...+..+.+++++++
T Consensus 482 ~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~ 557 (578)
T PRK15490 482 YEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQ 557 (578)
T ss_pred ccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999994 799999999988877 78999999999999998874433222 123444567778877
Q ss_pred hcCCHHHHHHHHHHHHHH
Q 002314 544 TTHTAQEWAETFVSELND 561 (937)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~ 561 (937)
+.|++..-++.+++.++.
T Consensus 558 e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 558 ERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhCCHHHHHHHHHHHHHh
Confidence 669999999988877654
No 49
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.86 E-value=8e-20 Score=211.27 Aligned_cols=285 Identities=14% Similarity=0.115 Sum_probs=198.7
Q ss_pred CCCCEEEEeCcccch--HHHHHHhhCCCCeEEEEEccCCCchhhh-ccCc--cc----hHHHHh-hhcCCEEEEeCHHHH
Q 002314 230 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIH-RTLP--SR----SDLLRA-VLAADLVGFHTYDYA 299 (937)
Q Consensus 230 ~~~DvVwvHDyhl~l--lp~~Lr~~~~~~~I~~flH~PfPs~e~f-r~lp--~r----~eil~~-ll~aDlIgF~t~~~~ 299 (937)
...|+||+|...++. ....+++ ..+.|+++.+|--||..-.- ...+ .. ..+.+. +..+|.|.+.+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 457999999866542 2233443 34667887777655532110 0010 00 011111 335888888888666
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccC
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 376 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~K 376 (937)
+.+.. .+ ....++.++|+|||.+.|.+... .....+++++ .++.+|+++||+.+.|
T Consensus 184 ~~~~~-----~~-----------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KG-----------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cC-----------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 65432 11 22457889999999998865321 1123355555 3567899999999999
Q ss_pred CHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 002314 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (937)
Q Consensus 377 Gi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~al 456 (937)
|+..+++|++++ +++|+ +.|+++| +++.. +++++++.+.+. ..|+| .|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG-----~g~~~----~~l~~~~~~~~l-------~~v~f-~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICG-----QGGGK----ARLEKMAQCRGL-------PNVHF-LPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEEC-----CChhH----HHHHHHHHHcCC-------CceEE-eCCCCHHHHHHH
Confidence 999999999876 44565 4577775 33332 345555544331 24665 689999999999
Q ss_pred HHHccEEEECCCCcCC----ChhHHHHHHhcCCCCceEEEeCCCCc--ccccCCceEEECCCCHHHHHHHHHHHHcCCHH
Q 002314 457 YAVTDVALVTSLRDGM----NLVSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 530 (937)
Q Consensus 457 y~~ADv~vv~Sl~EG~----nLv~~EamAc~~~~~g~lVlSe~aG~--~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~ 530 (937)
|+.||++|+||..|++ +...+|||||+ .|+|+|..+|. .+.+..+|++|+|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 9999999999999985 44579999994 78888887774 344446899999999999999999999865 5
Q ss_pred HHHHHHHhhhhhhh-cCCHHHHHHHHHHHHHHhH
Q 002314 531 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 563 (937)
Q Consensus 531 er~~r~~~~~~~V~-~~~~~~W~~~fl~~l~~~~ 563 (937)
++..+.+++++++. .|++...+++|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 67778888888875 6999999999998887654
No 50
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.86 E-value=3.9e-20 Score=207.41 Aligned_cols=265 Identities=20% Similarity=0.218 Sum_probs=190.6
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|..+...+..++.+ ..++|+.+.+|-.++... .... .+..+|.+.+.+......+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~------~~~~---~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNF------RYNA---IMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHH------HHHH---HHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 469999998776555555444 347899999997665322 1122 23468988887765554443 112
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHHHHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af~~ 387 (937)
+. ...++.++|+|||...|.+.... ......+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 21 23578899999999888653221 12222355554 356789999999999999999999999
Q ss_pred hHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002314 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (937)
Q Consensus 388 ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~S 467 (937)
+.+.++++ .|+++|... ....+.+++.+.+.+.+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~~----~l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPDV----HLLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTF-VGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCCe----EEEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEE-cCC--cccHHHHHHhCCEEEecC
Confidence 98876654 477777432 1123444454455443211 13565 555 678999999999999999
Q ss_pred -CCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 468 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 468 -l~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|+++++++|..++...++++.++.++++++++
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999994 799999988887777 457999999999999999998888788888888888888875
Q ss_pred c
Q 002314 545 T 545 (937)
Q Consensus 545 ~ 545 (937)
+
T Consensus 348 ~ 348 (355)
T cd03819 348 T 348 (355)
T ss_pred H
Confidence 4
No 51
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.86 E-value=1.5e-19 Score=213.27 Aligned_cols=275 Identities=16% Similarity=0.103 Sum_probs=188.7
Q ss_pred CCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCc-hhhhccCc-cc---hHHHHhhhcCCEEEEeCHHHHHHHH
Q 002314 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS-SEIHRTLP-SR---SDLLRAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 229 ~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs-~e~fr~lp-~r---~eil~~ll~aDlIgF~t~~~~~~Fl 303 (937)
...+|+|+++-..... +..+ +..+.++++.++|.-.-. ...-...+ +. +..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4577999887655443 3333 556789999999964211 00000000 11 1223444456888777765444332
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~ 383 (937)
..... +.+...+|.++|+|++...+.+. ....+..|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 12234578899999876543321 0123468999999999999999999
Q ss_pred HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002314 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (937)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (937)
|+.++.++.|+++ |+++|. +++ .+++++++.+.+. .+ .|. +.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~~----l~i~G~-----G~~----~~~l~~~i~~~~l----~~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPELT----FDIYGE-----GGE----KQKLQKIINENQA----QD--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCeE----EEEEEC-----chh----HHHHHHHHHHcCC----CC--eEE-EcCCC---CHHHHHHhCCEE
Confidence 9999999999754 777763 333 2455566655432 11 355 46654 577899999999
Q ss_pred EECCCCcCCChhHHHHHHhcCCCCceEEEeCCC-Cccccc--CCceEEECC----CC----HHHHHHHHHHHHcCCHHHH
Q 002314 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 532 (937)
Q Consensus 464 vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~a-G~~~~l--g~~gllVnP----~D----~~~lA~aI~~aL~m~~~er 532 (937)
|+||.+||||++++|||||+ .|+|+|... |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999994 788888876 666666 789999984 33 8899999999994 3467
Q ss_pred HHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 533 EKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 533 ~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
.++.+++++.++.+++..-++++.+-+++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 77788888989999999988888766543
No 52
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.86 E-value=8.4e-20 Score=204.03 Aligned_cols=281 Identities=20% Similarity=0.162 Sum_probs=192.3
Q ss_pred CCCEEEEeCcccch---HHHHHHh--hCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMF---LPKCLKE--YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~l---lp~~Lr~--~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~ 305 (937)
..|+|++|+++-.. ....+.. ...+.|+.+.+|...+...... ........+-.+|.|.+.+.+.++.+...
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 152 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELLRALLLR 152 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHHHHHHhh
Confidence 45899998733211 1111111 2368899999998622211111 01112223446899998874444444420
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAF 385 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af 385 (937)
....++.++|+|+|...+..... . +. .....++++|+++||+.+.||+..+++|+
T Consensus 153 -----------------~~~~~~~~i~~~~~~~~~~~~~~------~-~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a~ 207 (366)
T cd03822 153 -----------------AYPEKIAVIPHGVPDPPAEPPES------L-KA-LGGLDGRPVLLTFGLLRPYKGLELLLEAL 207 (366)
T ss_pred -----------------cCCCcEEEeCCCCcCcccCCchh------h-Hh-hcCCCCCeEEEEEeeccCCCCHHHHHHHH
Confidence 01357889999999876653210 1 11 11224678999999999999999999999
Q ss_pred HHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002314 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (937)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (937)
+.+.+++|++ .|+++|.... ... .......+++.+.+ .. ..|.++.+.++.+++..+|+.||++++
T Consensus 208 ~~~~~~~~~~----~l~i~G~~~~-~~~---~~~~~~~~~i~~~~----~~--~~v~~~~~~~~~~~~~~~~~~ad~~v~ 273 (366)
T cd03822 208 PLLVAKHPDV----RLLVAGETHP-DLE---RYRGEAYALAERLG----LA--DRVIFINRYLPDEELPELFSAADVVVL 273 (366)
T ss_pred HHHHhhCCCe----EEEEeccCcc-chh---hhhhhhHhHHHhcC----CC--CcEEEecCcCCHHHHHHHHhhcCEEEe
Confidence 9998887765 4777764221 111 11111002233322 11 246665555999999999999999999
Q ss_pred CCCCc--CCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 466 TSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 466 ~Sl~E--G~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
||..| |++++++|||||+ .|+|+|..+| .+++ +.+|+++++.|+++++++|.++++++ +++.++.++.++
T Consensus 274 ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 347 (366)
T cd03822 274 PYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARARE 347 (366)
T ss_pred cccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHH
Confidence 99999 9999999999994 7889898888 6666 56799999999999999999999865 466777788889
Q ss_pred hhhcCCHHHHHHHHHHHH
Q 002314 542 HVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 542 ~V~~~~~~~W~~~fl~~l 559 (937)
+++++++..+++++++.+
T Consensus 348 ~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 348 YARAMSWERVAERYLRLL 365 (366)
T ss_pred HHhhCCHHHHHHHHHHHh
Confidence 998899999999887654
No 53
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.86 E-value=1.4e-19 Score=210.21 Aligned_cols=322 Identities=13% Similarity=0.099 Sum_probs=192.3
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc-hHHHHhhhcCCE--EEEeCHHHHHHHHHH-
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADL--VGFHTYDYARHFVSA- 305 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r-~eil~~ll~aDl--IgF~t~~~~~~Fl~~- 305 (937)
.+.|++|.|||+......+||++.++++.+|+.|- +++.|.+-.. ..+-..|-..|. -.=...-+.++.+..
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHA----T~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHA----TLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecc----cccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 46899999999999999999988899999999994 4555542211 011100000000 000000012222221
Q ss_pred ----HHHHhCcc-cCCC-ceeeCCeeeEEEEEecccChhhhhhhhcCC----chHHHHHH-----HHHHhc---CCcEEE
Q 002314 306 ----CTRILGFE-GTPE-GVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE-----LQETFA---GRKVML 367 (937)
Q Consensus 306 ----~~r~lg~~-~~~~-~v~~~gr~~~i~v~P~GID~~~f~~~~~~~----~~~~~~~~-----lr~~~~---~~~iIL 367 (937)
+++++.++ ++.. .....++...+ |+|||||++.|.+..... ..++.+.. ++.+|+ ++++++
T Consensus 223 aa~~Ad~fttVS~it~~E~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~ 301 (590)
T cd03793 223 AAHCAHVFTTVSEITAYEAEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYF 301 (590)
T ss_pred HHhhCCEEEECChHHHHHHHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEE
Confidence 11111110 0011 11233444333 999999999987542110 01112222 344442 677888
Q ss_pred E-Eecccc-cCCHHHHHHHHHHhHHhCcCcc-CcEEEEEEEcCCCCCh---------hHHHHHHHHHHHHHHHhhcc---
Q 002314 368 G-VDRLDM-IKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDV---------PEYQRLTSQVHEIVGRINGR--- 432 (937)
Q Consensus 368 ~-VdRld~-~KGi~~~l~Af~~ll~~~P~~~-~~v~Lvqi~~p~r~~~---------~~y~~l~~~l~~lv~~IN~~--- 432 (937)
+ +||+++ .||++.+|+|+.++-..--.-. ++.|+..+..|+.... .-.++|++.++++..+|+.+
T Consensus 302 f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~ 381 (590)
T cd03793 302 FTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFE 381 (590)
T ss_pred EEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhh
Confidence 8 899999 9999999999998855211111 1223334445665432 12344555555555555444
Q ss_pred -----------------------------------------------------------cC-CCCcccEEEeCCCCC---
Q 002314 433 -----------------------------------------------------------FG-TLTAVPIHHLDRSLD--- 449 (937)
Q Consensus 433 -----------------------------------------------------------~g-~~~~~pV~~~~~~v~--- 449 (937)
|. ..+...|+|...+++
T Consensus 382 ~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~ 461 (590)
T cd03793 382 AALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTN 461 (590)
T ss_pred HhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCC
Confidence 10 122345665544444
Q ss_pred ---HHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc----cccC---CceEEEC-------CC
Q 002314 450 ---FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG---AGAILVN-------PW 512 (937)
Q Consensus 450 ---~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~----~~lg---~~gllVn-------P~ 512 (937)
..+...+|+.||+||+||++||||++++|||||+ .|+|+|..+|.. +.++ ..|+.|. +.
T Consensus 462 ~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e 537 (590)
T cd03793 462 PLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDE 537 (590)
T ss_pred CcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHH
Confidence 3457888999999999999999999999999994 899999999884 4443 3578887 45
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHH
Q 002314 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 560 (937)
+++++|++|.+.++++..++........+....++|.+-+..+++.-.
T Consensus 538 ~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 538 SVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 678999999999977643333332233366678888888887776544
No 54
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.86 E-value=7.6e-20 Score=221.25 Aligned_cols=281 Identities=14% Similarity=0.081 Sum_probs=185.4
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEE-EEccCC--CchhhhccCccchHHHHhhhcCCEEEEe--CHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPF--PSSEIHRTLPSRSDLLRAVLAADLVGFH--TYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~-flH~Pf--Ps~e~fr~lp~r~eil~~ll~aDlIgF~--t~~~~~~Fl~~ 305 (937)
..||||+|.+.-.++..+..+. ..+|+.+ .+|+-. ...+.++. ....+...+..++.+.+. +....+.|..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~- 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALL-AGVPRIVLSVRTMPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD- 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCCCccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH-
Confidence 4699999998887777766654 3566554 556521 11121110 011122333333433322 2222222221
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc-CCcEEEEEecccccCCHHHHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLLA 384 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIL~VdRld~~KGi~~~l~A 384 (937)
.++ ....+|.++|||||++.|.+. +...+....++.... +..+|++|||+++.||+..+|+|
T Consensus 476 ---~~g-----------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A 538 (694)
T PRK15179 476 ---WLG-----------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEA 538 (694)
T ss_pred ---HcC-----------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHH
Confidence 111 234688999999999888532 111111122222222 45688899999999999999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
|..+++++|+++ |+++|. ++. ++++++++.+.+.. ..|+ |.|.. +++..+|+.||+||
T Consensus 539 ~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~------~~V~-flG~~--~dv~~ll~aaDv~V 596 (694)
T PRK15179 539 AQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG------ERIL-FTGLS--RRVGYWLTQFNAFL 596 (694)
T ss_pred HHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC------CcEE-EcCCc--chHHHHHHhcCEEE
Confidence 999999998764 877763 222 34455666554421 1355 56765 47899999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCH--HHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~--~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
+||.+|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.++++
T Consensus 597 lpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~ar 671 (694)
T PRK15179 597 LLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKAA 671 (694)
T ss_pred eccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHHH
Confidence 9999999999999999994 789999988888888 668999998875 689999999887543 2233445667
Q ss_pred hhh-hcCCHHHHHHHHHHHH
Q 002314 541 THV-TTHTAQEWAETFVSEL 559 (937)
Q Consensus 541 ~~V-~~~~~~~W~~~fl~~l 559 (937)
+++ +.|++..-++++++-.
T Consensus 672 ~~a~~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 672 DWASARFSLNQMIASTVRCY 691 (694)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 776 5789998888876543
No 55
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.85 E-value=3.8e-20 Score=206.76 Aligned_cols=276 Identities=19% Similarity=0.179 Sum_probs=199.6
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCch--hhhcc---CccchHHHHhhhcCCEEEEeCHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~--e~fr~---lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
...|+||+|++..... +..+.++.+.+|-.+|.. ..+.. ...+..+...+..+|.+.+.+...+..+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 4679999999877765 356889999999765422 11111 112233455566789998888766665544
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~A 384 (937)
. .+ ....++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~~-----------~~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----LG-----------VPPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----hC-----------cCHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1 11 12457889999999887754211 11 1111222577899999999999999999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
+..+.+.+|++ .|+++|.... .+......+ .+.+ .. ..|+ +.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~~----~l~i~G~~~~----~~~~~~~~~----~~~~----~~--~~v~-~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPDP----KLVIVGKRGW----LNEELLARL----RELG----LG--DRVR-FLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCCC----CEEEecCCcc----ccHHHHHHH----HHcC----CC--CeEE-ECCCCChhHHHHHHhhhhhhc
Confidence 99999888754 4777764321 111112221 1111 11 1344 589999999999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
+||..||+|++++|||+|+ .|+|+|+.+|..+.++.+|+++++.|.++++++|.++++++ +.+..+.+++++++.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLEDP-ALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHH
Confidence 9999999999999999994 78888888887777778899999999999999999998754 567777777888889
Q ss_pred cCCHHHHHHHHH
Q 002314 545 THTAQEWAETFV 556 (937)
Q Consensus 545 ~~~~~~W~~~fl 556 (937)
.++|+.++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999999875
No 56
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.85 E-value=1.2e-19 Score=203.68 Aligned_cols=252 Identities=18% Similarity=0.078 Sum_probs=172.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHH-HHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~ei-l~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
+.|+|++|..+...++.++.+......+.+..|..+...+.+........+ ...+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 569999999887777777666555555667778765443322211110011 112234677666665444433220
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHHHH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af~ 386 (937)
....++.++|+|||.+.|..... ..+ . ++.+ .++.+|+++||+.+.||++.+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~---~-~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRK---K-RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhh---H-HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 12357889999999988764321 111 1 2222 46788999999999999999999999
Q ss_pred HhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002314 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (937)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (937)
.+.+++|+++ |+++|. ++... .+++++.+.+. . ..|++ .|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~~----l~ivG~-----g~~~~----~~~~~~~~~~~----~--~~v~~-~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNAK----LLLVGD-----GELEE----EIKKKVKELGL----E--DKVIF-LGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCeE----EEEEeC-----CchHH----HHHHHHHhcCC----C--CcEEE-ecc--cCCHHHHHHhcCEEEec
Confidence 9999888754 777763 33222 33334433221 1 23554 555 67899999999999999
Q ss_pred CCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCC-ceEEECCCCHHHHHHHHHHHHcCCHHHH
Q 002314 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEER 532 (937)
Q Consensus 467 Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~-~gllVnP~D~~~lA~aI~~aL~m~~~er 532 (937)
|..||||++++|||||+ .|+|+|+.+|..+.++. ++++..+.+++++|++|.++++++..++
T Consensus 274 s~~E~~~~~~lEAma~G----~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~ 336 (358)
T cd03812 274 SLYEGLPLVLIEAQASG----LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRER 336 (358)
T ss_pred ccccCCCHHHHHHHHhC----CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhh
Confidence 99999999999999994 89999999998888843 4555566678999999999999886443
No 57
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.85 E-value=2.2e-19 Score=207.75 Aligned_cols=271 Identities=14% Similarity=0.114 Sum_probs=192.2
Q ss_pred CCCEEEEeCcccc-hHHHHHHhhCCCCeEEEEEccCCCchhh--hccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEI--HRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 231 ~~DvVwvHDyhl~-llp~~Lr~~~~~~~I~~flH~PfPs~e~--fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
+.|+++.|-++.. ....+++++....++....|......+. ...++.++.+ +-.+|.|.+.+....+.+..
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~--- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQK--- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHH---
Confidence 5577777655543 3334566665555688888853111111 1111222222 34689999888866554432
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ 387 (937)
..+ ....++.++|+|+|...+.... ...++..|+++||+.+.||++.+++|+.+
T Consensus 201 -~~~-----------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~ 254 (407)
T cd04946 201 -RYP-----------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAA 254 (407)
T ss_pred -HCC-----------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHH
Confidence 111 2245778999999987664320 01356789999999999999999999999
Q ss_pred hHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH--ccEEEE
Q 002314 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALV 465 (937)
Q Consensus 388 ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~--ADv~vv 465 (937)
+.+.+|+.. +.++.+|. ++.. +.+++++.+.+ .. ..|+ +.|.++.+++.++|+. ||+|+.
T Consensus 255 l~~~~p~~~--l~~~iiG~-----g~~~----~~l~~~~~~~~----~~--~~V~-f~G~v~~~e~~~~~~~~~~~v~v~ 316 (407)
T cd04946 255 LAKARPSIK--IKWTHIGG-----GPLE----DTLKELAESKP----EN--ISVN-FTGELSNSEVYKLYKENPVDVFVN 316 (407)
T ss_pred HHHhCCCce--EEEEEEeC-----chHH----HHHHHHHHhcC----CC--ceEE-EecCCChHHHHHHHhhcCCCEEEe
Confidence 999888764 66666653 3333 33444443221 11 1355 5899999999999986 789999
Q ss_pred CCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECC-CCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 466 ~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP-~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
||..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++++| .|++++|++|.+++++ ++++.++.++++++
T Consensus 317 ~S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~ 391 (407)
T cd04946 317 LSESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREK 391 (407)
T ss_pred CCccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 999999999999999994 799999999988888 457899987 4899999999999985 46778888888888
Q ss_pred h-hcCCHHHHHHHHH
Q 002314 543 V-TTHTAQEWAETFV 556 (937)
Q Consensus 543 V-~~~~~~~W~~~fl 556 (937)
+ +.|++..+.++|+
T Consensus 392 ~~~~f~~~~~~~~~~ 406 (407)
T cd04946 392 WEENFNASKNYREFA 406 (407)
T ss_pred HHHHcCHHHhHHHhc
Confidence 7 6799999988875
No 58
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.85 E-value=1.9e-19 Score=200.39 Aligned_cols=278 Identities=17% Similarity=0.200 Sum_probs=186.8
Q ss_pred CCCCCEEEEeCcccc-hHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHH------HHhhhcCCEEEEeCHHHHHH
Q 002314 229 YKDGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL------LRAVLAADLVGFHTYDYARH 301 (937)
Q Consensus 229 ~~~~DvVwvHDyhl~-llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~ei------l~~ll~aDlIgF~t~~~~~~ 301 (937)
....|+|++|+...+ ..+.....+..+.++.++.|..++....... +....+ ...+..+|.|.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 346799999984332 2222221223478889999976654321000 011100 11223456666665433222
Q ss_pred HHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCH
Q 002314 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 378 (937)
Q Consensus 302 Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi 378 (937)
.. ..+...++.++|+|+|.+.|..... . . . ++.+ .++++|+++||+++.||+
T Consensus 164 ~~-----------------~~~~~~~~~vi~~~~~~~~~~~~~~---~--~--~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IR-----------------RLGLKAPIAVIPNGVDIPPFAALPS---R--G--R-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HH-----------------hhCCcccEEEcCCCcChhccCcchh---h--h--h-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 11 1123457889999999988864311 0 0 1 3333 367899999999999999
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (937)
..+++|+..+.+++|+++ |+++|... +.+ ...++.++.+.+ .. ..|+ +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~---~~~~~~~~~~~~----~~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDWH----LVIAGPDE----GGY---RAELKQIAAALG----LE--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCeE----EEEECCCC----cch---HHHHHHHHHhcC----cc--ceEE-EcCCCChHHHHHHHh
Confidence 999999999998888754 77776421 112 122333333322 11 1355 589999999999999
Q ss_pred HccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccC-CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHH
Q 002314 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (937)
Q Consensus 459 ~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg-~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (937)
.||++|+||..||||++++|||+|+ .|+|+|..+|..+.+. ..|++++ .+.++++++|.++++++ +++..+.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVVD-DDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEeC-CChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999994 7999999888888773 3455554 56699999999999987 67777778
Q ss_pred hhhhh-hhcCCHHHHHHHHH
Q 002314 538 HNFTH-VTTHTAQEWAETFV 556 (937)
Q Consensus 538 ~~~~~-V~~~~~~~W~~~fl 556 (937)
+++++ .+.+++..-+++++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 58889988888765
No 59
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.85 E-value=8.6e-20 Score=210.70 Aligned_cols=188 Identities=15% Similarity=0.074 Sum_probs=130.2
Q ss_pred eEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEec-c-cccCCHHHHHHHHHHhHHhCcCccCcEEEEE
Q 002314 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR-L-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (937)
Q Consensus 326 ~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdR-l-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq 403 (937)
.++.++|+|||++.+....... ..+ ...++++|++|+| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 5788999999975432211100 001 1246788999999 4 5789999999999875 23 356877
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 404 i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
+|... ... . ..|.++....+.+++..+|+.||+||+||..||||+|++|||||+
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 76421 100 0 124443222367899999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh-hhcCCHHHHHHHHHHHHH
Q 002314 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTHTAQEWAETFVSELN 560 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-V~~~~~~~W~~~fl~~l~ 560 (937)
.|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... +........++. ...|++..-++++++-.+
T Consensus 331 ----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 331 ----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred ----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 899999999988877 45899999999999998654322110 000112334554 466999999988877554
No 60
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.84 E-value=7.3e-19 Score=196.65 Aligned_cols=267 Identities=19% Similarity=0.180 Sum_probs=192.8
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+||+|..+...+..++..+....+..+.+|.+.. +.. +....+...+-.+|.+.+.+....+.+... .
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI----FRS-PDAIDLDEKLARADFVVAISEYNRQQLIRL----L 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc----ccc-CchHHHHHHHhhCCEEEECCHHHHHHHHHh----c
Confidence 4699999987665555555555557888888885421 111 011233444557999999888766655431 1
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||++.+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 1 2346788999999998876431 0112456789999999999999999999999887
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 469 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~- 469 (937)
..|+ +.|+++|.. +. ..++.+++.+.+. . ..|. +.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~----~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PL----RDELEALIAELGL----E--DRVT-LLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----cc----HHHHHHHHHHcCC----C--CeEE-ECCcCChHHHHHHHHhCCEEEecceec
Confidence 7665 457777632 21 1234444444321 1 1244 58999999999999999999999999
Q ss_pred -----cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh
Q 002314 470 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (937)
Q Consensus 470 -----EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (937)
||||++++|||+|+ .|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++++ +++..+.+++++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Confidence 99999999999994 788888887777766 45799999999999999999999876 4566677777777
Q ss_pred h-hcCCHHHHHHH
Q 002314 543 V-TTHTAQEWAET 554 (937)
Q Consensus 543 V-~~~~~~~W~~~ 554 (937)
+ ..|++...+++
T Consensus 342 ~~~~~s~~~~~~~ 354 (355)
T cd03799 342 VEEEFDIRKQAAR 354 (355)
T ss_pred HHHhcCHHHHhhc
Confidence 6 56787776653
No 61
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.84 E-value=2.5e-19 Score=203.62 Aligned_cols=268 Identities=18% Similarity=0.141 Sum_probs=186.6
Q ss_pred CCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCC-CchhhhccCcc---chHHHHhhhcCCEEEEeCHHHHHHHHH
Q 002314 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 229 ~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~Pf-Ps~e~fr~lp~---r~eil~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
...+|+|++|..+.... .+.......++..++|... .........++ .+.++..+-.+|.|.+.+..-.+.+..
T Consensus 97 ~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 174 (372)
T cd04949 97 DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQK 174 (372)
T ss_pred CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHH
Confidence 46789999988776655 2223334556667777532 11110001111 234555566789998888766555543
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~A 384 (937)
. ++ ...++.++|+|++...+.+.. .....+..|+++||+.+.||+..+|+|
T Consensus 175 ~----~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li~a 225 (372)
T cd04949 175 Q----FG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLIKA 225 (372)
T ss_pred H----hC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHHHH
Confidence 1 11 112378999999988765421 011356789999999999999999999
Q ss_pred HHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
+.++.+++|+++ |+++|.+ +.... +.+++.+.+. .. .|. +.|. .+++..+|+.||++|
T Consensus 226 ~~~l~~~~~~~~----l~i~G~g-----~~~~~----~~~~~~~~~~----~~--~v~-~~g~--~~~~~~~~~~ad~~v 283 (372)
T cd04949 226 FAKVVKQVPDAT----LDIYGYG-----DEEEK----LKELIEELGL----ED--YVF-LKGY--TRDLDEVYQKAQLSL 283 (372)
T ss_pred HHHHHHhCCCcE----EEEEEeC-----chHHH----HHHHHHHcCC----cc--eEE-EcCC--CCCHHHHHhhhhEEE
Confidence 999999999865 7777643 22222 2333333221 11 244 4563 467999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCC-Cccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~a-G~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
+||..||||++++|||+|+ .|+|+|+.. |..+.+ |.+|++|+|.|++++|++|.++|+++ +.+.++.+++++
T Consensus 284 ~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~ 358 (372)
T cd04949 284 LTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYE 358 (372)
T ss_pred ecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 9999999999999999994 788888876 666666 67899999999999999999999876 566777778888
Q ss_pred hhhcCCHHHHHHH
Q 002314 542 HVTTHTAQEWAET 554 (937)
Q Consensus 542 ~V~~~~~~~W~~~ 554 (937)
...++++..++++
T Consensus 359 ~~~~~s~~~~~~~ 371 (372)
T cd04949 359 NAERYSEENVWEK 371 (372)
T ss_pred HHHHhhHHHHHhc
Confidence 7888888877654
No 62
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.84 E-value=7.3e-19 Score=194.85 Aligned_cols=277 Identities=19% Similarity=0.169 Sum_probs=192.8
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCc-cchHHHHhh-hcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAV-LAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp-~r~eil~~l-l~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
..|+|++|+++...+...++......++.+..|..++... .... ....+..-+ -.+|.+.+.+......+...
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--- 154 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI--- 154 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc---
Confidence 4699999999987777776665468889999998654321 0011 111121111 23566655554433332220
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHHHHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 385 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~~l~Af 385 (937)
+ ....++.++|+|+|...|.+... ....+++++ .++.+|+++||+.+.||++.+++|+
T Consensus 155 --~-----------~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 155 --G-----------YPPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred --C-----------CChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 1 12356788999999988764321 112233444 3567889999999999999999999
Q ss_pred HHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHH-HhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEE
Q 002314 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG-RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (937)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~-~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (937)
..+.+++|++ .|+++|.+. ....+ ..... .. +.. ..|.+ .+. .+++..+|+.||+++
T Consensus 216 ~~l~~~~~~~----~l~i~G~~~-----~~~~~----~~~~~~~~----~~~--~~v~~-~g~--~~~~~~~~~~adi~v 273 (365)
T cd03807 216 ALLLKKFPNA----RLLLVGDGP-----DRANL----ELLALKEL----GLE--DKVIL-LGE--RSDVPALLNALDVFV 273 (365)
T ss_pred HHHHHhCCCe----EEEEecCCc-----chhHH----HHHHHHhc----CCC--ceEEE-ccc--cccHHHHHHhCCEEE
Confidence 9998887765 477776432 11111 12221 21 111 13444 453 468999999999999
Q ss_pred ECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-
Q 002314 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV- 543 (937)
Q Consensus 465 v~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V- 543 (937)
+||..||+|++++|||+|+ .|+|+|..+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++
T Consensus 274 ~ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~ 348 (365)
T cd03807 274 LSSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIE 348 (365)
T ss_pred eCCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHH
Confidence 9999999999999999994 79999999888888755799999999999999999999976 56677777888877
Q ss_pred hcCCHHHHHHHHHHH
Q 002314 544 TTHTAQEWAETFVSE 558 (937)
Q Consensus 544 ~~~~~~~W~~~fl~~ 558 (937)
+.+++..-+++|++.
T Consensus 349 ~~~s~~~~~~~~~~~ 363 (365)
T cd03807 349 ENFSIEAMVEAYEEL 363 (365)
T ss_pred HhCCHHHHHHHHHHH
Confidence 568999999888764
No 63
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.84 E-value=5.8e-19 Score=196.67 Aligned_cols=264 Identities=20% Similarity=0.190 Sum_probs=184.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccch---------HH-HHhhhcCCEEEEeCHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DL-LRAVLAADLVGFHTYDYAR 300 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~---------ei-l~~ll~aDlIgF~t~~~~~ 300 (937)
..|+|++|+...+........+..++++.+.+|.+|+. +....+... .+ ...+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 45999999875543333322234588999999988762 222222111 11 1223467888877775444
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCC
Q 002314 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 377 (937)
Q Consensus 301 ~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KG 377 (937)
.+.. .+...++.++|+|+|...|.+... .. .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----------------YGVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----------------cCCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 112345889999999988765321 11 12222 35678999999999999
Q ss_pred HHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002314 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (937)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (937)
+..+++|+..+.++.+++ .|+++|. ++. ..++++++.+.+. . ..|. +.+.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~~----~l~i~G~-----~~~----~~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPDV----KLVIVGD-----GPE----REELEELARELGL----A--DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEEEeC-----Cch----HHHHHHHHHHcCC----C--CcEE-EeccCChHHHHHHH
Confidence 999999999998876654 4777763 222 2334444443331 1 1355 57899999999999
Q ss_pred HHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHH
Q 002314 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (937)
Q Consensus 458 ~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r 535 (937)
+.||++++||..||+|++++|||+|+ .|+|+|..++..+.+ +.+|+++++.|. +++++|.++++++. .++++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999994 788888888877777 568999999888 99999999999875 44666
Q ss_pred HHhhhhhhhcCC
Q 002314 536 HWHNFTHVTTHT 547 (937)
Q Consensus 536 ~~~~~~~V~~~~ 547 (937)
.++.++++..++
T Consensus 351 ~~~~~~~~~~~~ 362 (374)
T cd03817 351 SKNAEESAEKFS 362 (374)
T ss_pred HHHHHHHHHHHH
Confidence 777788887665
No 64
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.83 E-value=1.4e-19 Score=197.87 Aligned_cols=191 Identities=15% Similarity=0.197 Sum_probs=123.7
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.||||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 589999999999975 34689999999999987 699999999999999999988874 4689999
Q ss_pred ceEEEe-cCCe-eeeccccccChhHHHHHHHHHHHHHhc--------CCCceeeeecce-------EEEEeeccChh---
Q 002314 669 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-------LVWNYKYADVE--- 728 (937)
Q Consensus 669 G~~ir~-~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~--------~~Gs~iE~K~~s-------l~~hyr~ad~e--- 728 (937)
|+.+.. .++. +... .+. +.+.++++..... ..+.+....... ..+.+...+.+
T Consensus 67 Ga~I~~~~~~~l~~~~----i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQD----LPA---DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEeec----CCH---HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999985 3322 2222 232 2333333322111 001111000000 00000000000
Q ss_pred ---h-------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEe
Q 002314 729 ---F-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (937)
Q Consensus 729 ---~-------~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iG 797 (937)
. ......++...+ ...+. ..+.+. .+..++||.|+++|||+||++|++++| ++.+++++||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 0 001122333333 22222 234544 456799999999999999999999999 6789999999
Q ss_pred cCCCCcHHHHHhcCc
Q 002314 798 HFLGKDEDVYAFFEP 812 (937)
Q Consensus 798 D~d~nDEdMf~~~~~ 812 (937)
| +.||.+||+.++.
T Consensus 212 D-~~NDi~Ml~~ag~ 225 (272)
T PRK15126 212 D-AMNDREMLGSVGR 225 (272)
T ss_pred C-CHHHHHHHHHcCC
Confidence 9 9999999999864
No 65
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.83 E-value=1.3e-19 Score=197.36 Aligned_cols=194 Identities=16% Similarity=0.218 Sum_probs=128.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc--eEEee
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liae 667 (937)
..++|++|+||||++. +..++++++++|++|.+ +|..|+|+|||++..+.+++..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999987 34599999999999986 6999999999999999999999854 69999
Q ss_pred CceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhc--CCCceeeeecceE------------E-----EEeecc---
Q 002314 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETSL------------V-----WNYKYA--- 725 (937)
Q Consensus 668 nG~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~--~~Gs~iE~K~~sl------------~-----~hyr~a--- 725 (937)
||+++...++. ......+. +.+..+++..... .+..+........ . +.....
T Consensus 67 NGa~i~~~~~~---i~~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLSR---EDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCCH---HHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999975322 21122333 3444444433221 1111111100000 0 000000
Q ss_pred Ch------hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCe-EEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 726 DV------EFGRIQARDMLQHLWTGPISNASVEVVQGSK-SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 726 d~------e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~-~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
+. ........++...+ ...+....+.+.++.. .+||.|+|+|||.|+++|+++++ ++.++|++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 00 00011123333333 3323333456666654 49999999999999999999998 56889999999
Q ss_pred CCCCcHHHHHhcCc
Q 002314 799 FLGKDEDVYAFFEP 812 (937)
Q Consensus 799 ~d~nDEdMf~~~~~ 812 (937)
+.||.+||++++.
T Consensus 214 -~~ND~~Ml~~ag~ 226 (264)
T COG0561 214 -STNDIEMLEVAGL 226 (264)
T ss_pred -ccccHHHHHhcCe
Confidence 9999999999986
No 66
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.83 E-value=1.5e-18 Score=191.31 Aligned_cols=278 Identities=23% Similarity=0.193 Sum_probs=200.8
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhc----cCccchHHHHhhhcCCEEEEeCHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr----~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~ 306 (937)
..|+|++|+++...+.. +..+..+.++.+.+|.+++...... ...........+..+|.+.+.+......+.+
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~-- 161 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRE-- 161 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHh--
Confidence 46999999998887765 3344578999999999876432110 0011122233444678888888766555443
Q ss_pred HHHhCcccCCCceeeCCe-eeEEEEEecccChhhhhhhhcCCchHHHHHHHHHH---hcCCcEEEEEecccccCCHHHHH
Q 002314 307 TRILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPVQVHIKELQET---FAGRKVMLGVDRLDMIKGIPQKL 382 (937)
Q Consensus 307 ~r~lg~~~~~~~v~~~gr-~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~---~~~~~iIL~VdRld~~KGi~~~l 382 (937)
..+. ..++.++|+|+|...+.... ...+.. ..++..|+++||+.+.||+..++
T Consensus 162 --------------~~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i 218 (374)
T cd03801 162 --------------LGGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLL 218 (374)
T ss_pred --------------cCCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHH
Confidence 1111 25788999999998775321 111111 13567899999999999999999
Q ss_pred HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002314 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (937)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (937)
+|+..+.+++|+ +.|+++|. ++.. ..+.+++.+.+. . ..|. +.+.++.+++..+|+.||+
T Consensus 219 ~~~~~~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~~~di 278 (374)
T cd03801 219 EALAKLRKEYPD----VRLVIVGD-----GPLR----EELEALAAELGL----G--DRVT-FLGFVPDEDLPALYAAADV 278 (374)
T ss_pred HHHHHHhhhcCC----eEEEEEeC-----cHHH----HHHHHHHHHhCC----C--cceE-EEeccChhhHHHHHHhcCE
Confidence 999999888765 44777762 2322 233333333221 1 2355 4789999999999999999
Q ss_pred EEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 463 ~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
+++||..||+|++++|||+|+ .|+|++..+|..+.+ +.+|+++++.|+++++++|.++++++ +.++++.++++
T Consensus 279 ~i~~~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~ 353 (374)
T cd03801 279 FVLPSLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAAR 353 (374)
T ss_pred EEecchhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999999999999999994 789999988888887 46899999999999999999999876 45566666666
Q ss_pred -hhhhcCCHHHHHHHHHHHH
Q 002314 541 -THVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 541 -~~V~~~~~~~W~~~fl~~l 559 (937)
...+.+++..+++.+++.+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 354 ERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHhcCHHHHHHHHHHhh
Confidence 4568899999999887654
No 67
>PHA01633 putative glycosyl transferase group 1
Probab=99.83 E-value=1.1e-18 Score=194.83 Aligned_cols=191 Identities=17% Similarity=0.196 Sum_probs=144.9
Q ss_pred EecccChhhhhhhhcCCchHHHHHHHHHH----hcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEc
Q 002314 331 FPIGIDSERFIRALEINPVQVHIKELQET----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (937)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~----~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~ 406 (937)
+|+|||.+.|.+... ...+++++ +.+..+|++|||+++.||+..+++|++++.+++|++..++.|+++|
T Consensus 118 I~~GVD~~~f~p~~~------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG- 190 (335)
T PHA01633 118 VFHGINFKIVENAEK------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVIS- 190 (335)
T ss_pred eeCCCChhhcCccch------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEc-
Confidence 678999999875321 11233333 3466789999999999999999999999999999876667777664
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC--CCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcC
Q 002314 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (937)
Q Consensus 407 p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~ 484 (937)
+ .. +++ . +..+ .|+|+. |.++.+++.++|+.||+||+||..||||++++|||||+
T Consensus 191 ----~-~~-------~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G- 247 (335)
T PHA01633 191 ----H-KQ-------FTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG- 247 (335)
T ss_pred ----H-HH-------HHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-
Confidence 1 11 111 1 1111 366542 67789999999999999999999999999999999994
Q ss_pred CCCceEEEeCCCCcccccC------------------C--ceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 485 LKKGVLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 485 ~~~g~lVlSe~aG~~~~lg------------------~--~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
.|+|+|..+|..+..| . .|++|+++|++++|++|.+++.+.. +..|..++++..+
T Consensus 248 ---~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~ 322 (335)
T PHA01633 248 ---TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAK 322 (335)
T ss_pred ---CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHH
Confidence 7889998877776543 1 2557889999999999999988763 3344556678899
Q ss_pred cCCHHHHHHHHH
Q 002314 545 THTAQEWAETFV 556 (937)
Q Consensus 545 ~~~~~~W~~~fl 556 (937)
++++..-.++|+
T Consensus 323 ~f~~~~~~~~~~ 334 (335)
T PHA01633 323 KYDIRNLYTRFL 334 (335)
T ss_pred hcCHHHHHHHhh
Confidence 999998888775
No 68
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.83 E-value=2e-18 Score=192.73 Aligned_cols=280 Identities=19% Similarity=0.172 Sum_probs=196.7
Q ss_pred CCCCCEEEEeC-cccchHHHHHHhhCCCCeEEEEEccCCCchhhhcc-Cc-------cchHH-HHhhhcCCEEEEeCHHH
Q 002314 229 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT-LP-------SRSDL-LRAVLAADLVGFHTYDY 298 (937)
Q Consensus 229 ~~~~DvVwvHD-yhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~-lp-------~r~ei-l~~ll~aDlIgF~t~~~ 298 (937)
....|+|++|. ..+..++........+.++.+.+|..||....... .. ....+ ...+..+|.|.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 34679999998 33444444444445588999999988774322111 11 01111 22344689999999877
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCH
Q 002314 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (937)
Q Consensus 299 ~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi 378 (937)
.+.|.. . .....++.++|+|+|...+.+.... ..... .....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~-----------~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----R-----------GVPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----c-----------CCCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCcccccCH
Confidence 766541 1 1124578899999999877643211 00000 0112467889999999999999
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (937)
..+++|+..+.+. |+ +.|+++|. ++....+ .+++... + ...|.+ .+.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~----~~~~~~~----~---~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEEL----KELAKAL----G---LDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHH----HHHHHHc----C---CCcEEE-eCCCChHHHHHHHH
Confidence 9999999998776 55 44776653 2222222 2222211 1 124665 56999999999999
Q ss_pred HccEEEECCCCcCC-----ChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHH
Q 002314 459 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (937)
Q Consensus 459 ~ADv~vv~Sl~EG~-----nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~e 531 (937)
.||++++||..|++ +++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|+++++++|.++++++ ++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhCh-HH
Confidence 99999999999876 66789999994 799999999988887 35799999999999999999999654 57
Q ss_pred HHHHHHhhhhhhh-cCCHHHHHHHHH
Q 002314 532 REKRHWHNFTHVT-THTAQEWAETFV 556 (937)
Q Consensus 532 r~~r~~~~~~~V~-~~~~~~W~~~fl 556 (937)
+.++.+++++++. .|++..++++++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 7777788888886 899999988763
No 69
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.83 E-value=7.8e-19 Score=195.80 Aligned_cols=272 Identities=23% Similarity=0.192 Sum_probs=191.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc----hHHHH-hhhcCCEEEEeCHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLR-AVLAADLVGFHTYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r----~eil~-~ll~aDlIgF~t~~~~~~Fl~~ 305 (937)
.+|+|++|......+......+..++|+.+++|..||..-........ ..+.+ ..-.+|.|.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 459999997544322222222234788999999877632111111111 12222 233678888877755542211
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCcEEEEEecccccCCHHHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 383 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIL~VdRld~~KGi~~~l~ 383 (937)
....++.++|+|+|.+.|.+.... ...++++ .++++|+++||+.+.||+..+++
T Consensus 162 -----------------~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 -----------------RGFRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred -----------------cCCCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 012467889999999887643211 1112222 35678999999999999999999
Q ss_pred HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002314 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (937)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (937)
|+..+.++ |++ .|+++|. +++...++ ..+ ..|.+ .|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~--------~~~--------~~v~~-~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPV----RLVIVGD-----GPARARLE--------ARY--------PNVHF-LGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCc----eEEEEeC-----CchHHHHh--------ccC--------CcEEE-EeccCHHHHHHHHHhCCEE
Confidence 99999776 654 4777763 22211111 111 24664 6779999999999999999
Q ss_pred EECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 464 vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
++||..||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|.++++++|.++++.+ +++.++..++++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999994 789999988888877 36799999999999999999999865 566777778888
Q ss_pred hhhcCCHHHHHHHHHHHH
Q 002314 542 HVTTHTAQEWAETFVSEL 559 (937)
Q Consensus 542 ~V~~~~~~~W~~~fl~~l 559 (937)
.+..+++..+++++++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888999999999887654
No 70
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.83 E-value=1.7e-18 Score=191.74 Aligned_cols=282 Identities=22% Similarity=0.209 Sum_probs=196.2
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
...|+|++|......+......+..++++.+..|.+++....... ..+......+..+|.|.+.+......|....
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 456999999655443333333334457888999987653221111 1223334445578999998887666654311
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
....++.++|+|+|...|.+... .....+ ....++.+|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 12357889999999988764311 011111 11246788999999999999999999999998
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (937)
+++|++ .|+++|. ++... .+.+++...+. . ..|. +.+.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~~----~l~i~g~-----~~~~~----~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPDV----HLVIVGD-----GPLRE----ALEALAAELGL----E--DRVT-FLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCCe----EEEEEcC-----CcchH----HHHHHHHhcCC----c--ceEE-EeCCCCHHHHHHHHHhcCeeecchhh
Confidence 876654 4766653 22222 23333332221 1 1244 57899999999999999999999999
Q ss_pred cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh-hhhhcC
Q 002314 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 546 (937)
Q Consensus 470 EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~-~~V~~~ 546 (937)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+.+ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999994 789999988888777 4567999999999999999999998753 3444444 445778
Q ss_pred CHHHHHHHHHHHHHH
Q 002314 547 TAQEWAETFVSELND 561 (937)
Q Consensus 547 ~~~~W~~~fl~~l~~ 561 (937)
++..+++.+++.+++
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 999999988876653
No 71
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.82 E-value=1.8e-18 Score=190.05 Aligned_cols=262 Identities=17% Similarity=0.109 Sum_probs=182.5
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+..+|.|.+.+......+
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------- 150 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------- 150 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh--------
Confidence 5699999998732222222221 1478888887654322111 011112333456888888877544110
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
......++.++|+|++...+... ...+++.++++||+.+.||++.+++|+..+.+
T Consensus 151 ----------~~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 151 ----------YKKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred ----------hccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 01123578899999998766432 12357899999999999999999999999988
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCc
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (937)
.+|++ .|+++|.. ++. ..+.+++.+.+.. ..|. +.+. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~----~~~~~~~~~~~~~------~~v~-~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PER----EALEALIKELGLE------DRVI-LLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCH----HHHHHHHHHcCCC------CeEE-EcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77765 47766532 222 2233344443321 1344 4555 689999999999999999999
Q ss_pred CCChhHHHHHHhcCCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCC
Q 002314 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (937)
Q Consensus 471 G~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~ 547 (937)
|||++++|||+|+ .|+|+|...|..+.+ +.+|+++++.|+++++++|.++++++ +.+.++.+++++.++.++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999994 788888876655544 34899999999999999999999865 456666667778889999
Q ss_pred HHHHHHHHH
Q 002314 548 AQEWAETFV 556 (937)
Q Consensus 548 ~~~W~~~fl 556 (937)
+..++++|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 999988774
No 72
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.82 E-value=8.4e-19 Score=191.85 Aligned_cols=186 Identities=16% Similarity=0.194 Sum_probs=124.7
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc---eEEe
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l---~lia 666 (937)
.+++||+|+||||++. ...+++.++++|++|.+ .|+.|+|+|||+...+..++..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 5789999999999975 23578899999999986 6999999999999999999888754 6999
Q ss_pred eCceEEEecCC-e----eeeccccccChhHHHHHHHHHHHHHhcCCCcee--e-e----------------------ecc
Q 002314 667 ENGMFLRCTTG-K----WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--E-Q----------------------RET 716 (937)
Q Consensus 667 enG~~ir~~~~-~----w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~i--E-~----------------------K~~ 716 (937)
+||+.+....+ . +. ......+. +.+.++++..... .+..+ . . ...
T Consensus 71 ~NGa~I~~~~~~~~~~~~~-~~~~~l~~---~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFP-RIISGISH---GEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEA 145 (271)
T ss_pred eCCCEEEecCcccCCCCce-EeecCCCH---HHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhcccc
Confidence 99999985321 1 10 10011222 3334444433221 01100 0 0 000
Q ss_pred eEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCC---CCceE
Q 002314 717 SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYV 793 (937)
Q Consensus 717 sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~---~~d~v 793 (937)
...+.+.. +++ ...++.+.+ .. ..+.++.+..++||+|+++|||+|+++|+++++ + +.+++
T Consensus 146 ~~~~~~~~-~~~----~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~v 209 (271)
T PRK03669 146 SVTLIWRD-SDE----RMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTT 209 (271)
T ss_pred CceeEecC-CHH----HHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceE
Confidence 00111110 111 123344444 22 145666666789999999999999999999998 5 78999
Q ss_pred EEEecCCCCcHHHHHhcCc
Q 002314 794 LCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 794 l~iGD~d~nDEdMf~~~~~ 812 (937)
++||| +.||.+||++++.
T Consensus 210 iafGD-s~NDi~Ml~~ag~ 227 (271)
T PRK03669 210 LGLGD-GPNDAPLLDVMDY 227 (271)
T ss_pred EEEcC-CHHHHHHHHhCCE
Confidence 99999 9999999999865
No 73
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.82 E-value=5.9e-19 Score=187.84 Aligned_cols=181 Identities=12% Similarity=0.208 Sum_probs=120.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 589999999999975 34588999999999986 699999999999999988877774 4799999
Q ss_pred ceEEEec--CCe-eeeccccccChhHHHHHHHHHHHHHhcCCCc--eeeee--c--ceEEEEeeccChhhhHHHHHHHHH
Q 002314 669 GMFLRCT--TGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQR--E--TSLVWNYKYADVEFGRIQARDMLQ 739 (937)
Q Consensus 669 G~~ir~~--~~~-w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs--~iE~K--~--~sl~~hyr~ad~e~~~~~a~el~~ 739 (937)
|+.+... +.. +... .+ .+..+++.+....+.. .+... . ......++..+ ..++.+
T Consensus 68 Ga~i~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 131 (230)
T PRK01158 68 GGVISVGFDGKRIFLGD----IE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP-------VEEVRE 131 (230)
T ss_pred CeEEEEcCCCCEEEEcc----hH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc-------HHHHHH
Confidence 9999753 222 2211 11 1222222222222211 11100 0 00011111111 111222
Q ss_pred HHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 740 HLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 740 ~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+ +.. ...+.+..+...+|+.|+++|||.|+++++++++ ++++++++||| +.||++||+.++.
T Consensus 132 ~l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 194 (230)
T PRK01158 132 LL-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGF 194 (230)
T ss_pred HH-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCc
Confidence 22 221 1235566666789999999999999999999998 57899999999 9999999998854
No 74
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.82 E-value=7e-19 Score=203.59 Aligned_cols=265 Identities=12% Similarity=0.074 Sum_probs=167.6
Q ss_pred CCCEEEEeCcccchH---HHHHHhhCCCCeEEEEEccCCCchhhhccCc--cchHHHHhhhcCCEEEEeCHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFL---PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSA 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~ll---p~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp--~r~eil~~ll~aDlIgF~t~~~~~~Fl~~ 305 (937)
.+|+||+|+.-.+.. +..++++. .. ++.++|+.|+ ++++... .....+...+ ..|++.|.
T Consensus 116 ~pDVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~~~r~~-- 180 (462)
T PLN02846 116 EADIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSWVVDIY-- 180 (462)
T ss_pred CCCEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHHHHHHh--
Confidence 359999999655544 34444444 44 7778999875 4433211 1011111111 12222221
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cC---CcEEEEEecccccCCHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AG---RKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~iIL~VdRld~~KGi~~~ 381 (937)
|+.++.++.. ..++. ..+.+.+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+
T Consensus 181 ~d~vi~pS~~--~~~l~---~~~i~~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~L 246 (462)
T PLN02846 181 CHKVIRLSAA--TQDYP---RSIICNVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKEL 246 (462)
T ss_pred cCEEEccCHH--HHHHh---hCEEecCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHH
Confidence 3333322210 00010 112334589999988653211 11222 22 3468999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
|+||..+.+..|+++ |+++| +||+..+ +++++.+++. .+++|.|..+.+ .+|..+|
T Consensus 247 i~a~~~l~~~~~~~~----l~ivG-----dGp~~~~----L~~~a~~l~l--------~~~vf~G~~~~~---~~~~~~D 302 (462)
T PLN02846 247 LKLLHKHQKELSGLE----VDLYG-----SGEDSDE----VKAAAEKLEL--------DVRVYPGRDHAD---PLFHDYK 302 (462)
T ss_pred HHHHHHHHhhCCCeE----EEEEC-----CCccHHH----HHHHHHhcCC--------cEEEECCCCCHH---HHHHhCC
Confidence 999999988888754 77774 5665444 4445544331 234467765544 6899999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
|||+||.+||||+|++|||||+ .|+|+++..| .+.+ +.+|+++ .|.++++++|.++|..++++... +.
T Consensus 303 vFv~pS~~Et~g~v~lEAmA~G----~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a 372 (462)
T PLN02846 303 VFLNPSTTDVVCTTTAEALAMG----KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ 372 (462)
T ss_pred EEEECCCcccchHHHHHHHHcC----CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH
Confidence 9999999999999999999994 6788887765 5666 7788888 48999999999999865433221 11
Q ss_pred hhhhhcCCHHHHHHHHHHHHHH
Q 002314 540 FTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 540 ~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
...++|..-+++|+..+.-
T Consensus 373 ---~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 373 ---RHELSWEAATERFLRVADL 391 (462)
T ss_pred ---HHhCCHHHHHHHHHHHhcc
Confidence 2478999999988876654
No 75
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.82 E-value=1.7e-18 Score=202.90 Aligned_cols=263 Identities=12% Similarity=0.115 Sum_probs=165.1
Q ss_pred CCCEEEEeCcccc-hH--HHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHH--
Q 002314 231 DGDVVWCHDYHLM-FL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 305 (937)
Q Consensus 231 ~~DvVwvHDyhl~-ll--p~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~-- 305 (937)
++|+||+|..-.+ .. +..+.+++ + +++..+||.|+. |++.... ..+..++ ..++.+|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhh
Confidence 5699999985444 44 33344444 3 688899999984 4443221 1111111 1122333332
Q ss_pred HHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---CCcEEEEEecccccCCHHHHH
Q 002314 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 382 (937)
Q Consensus 306 ~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIL~VdRld~~KGi~~~l 382 (937)
|+.++.++.... ++. ...|. ..+|||++.|.+.... ... +.++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 555554331000 111 11111 1259999998764221 111 2221 224589999999999999999
Q ss_pred HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002314 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (937)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (937)
+|+..+.++.|++ .|+++| ++++.. ++++++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pnv----rLvIVG-----DGP~re----eLe~la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDGF----NLDVFG-----NGEDAH----EVQRAAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCCe----EEEEEc-----CCccHH----HHHHHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 9999988877765 477775 455433 44445544331 2555 45433 33479999999
Q ss_pred EEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 463 ~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
||+||.+||||+|++|||||+ .|||++...|. +.+ |.+|++. .|.++++++|.++|.+++ ++..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 999999999999999999994 78888888774 334 4566654 789999999999999775 22221 1
Q ss_pred hhhhcCCHHHHHHHHHHH
Q 002314 541 THVTTHTAQEWAETFVSE 558 (937)
Q Consensus 541 ~~V~~~~~~~W~~~fl~~ 558 (937)
....++|..-+++|+..
T Consensus 690 -a~~~~SWeAaadrLle~ 706 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEY 706 (794)
T ss_pred -HHhhCCHHHHHHHHHHh
Confidence 13377888888877654
No 76
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.82 E-value=2.1e-18 Score=195.89 Aligned_cols=239 Identities=15% Similarity=0.134 Sum_probs=165.8
Q ss_pred HHhCCCCCEEEEeCcccchHHHHHHhh-CCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHH
Q 002314 226 NKHYKDGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 226 ~~~~~~~DvVwvHDyhl~llp~~Lr~~-~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
.+..+ .|+||+|++....+..++++. ....++..+.|..++....+. ...+..+|.+...+....+.+..
T Consensus 80 l~~~~-~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~ 150 (359)
T PRK09922 80 LKETQ-PDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA 150 (359)
T ss_pred HHhcC-CCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH
Confidence 33334 599999998777666666654 233455666676543221111 12235788888877655444432
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEeccc--ccCCHHHHH
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQKL 382 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld--~~KGi~~~l 382 (937)
.++ ...++.++|+|||.+.|.... + ...++++|+++||+. ..||+..++
T Consensus 151 -----~~~-----------~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~ 201 (359)
T PRK09922 151 -----RGI-----------SAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQKNVKELF 201 (359)
T ss_pred -----cCC-----------CHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccCcCHHHHH
Confidence 121 234688899999976653211 1 013467899999996 469999999
Q ss_pred HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC--CHHHHHHHHHHc
Q 002314 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL--DFPALCALYAVT 460 (937)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v--~~~el~aly~~A 460 (937)
+|+.++. + ++.|+++|. +++. +++++++++.|.. ..|+| .|.+ +.+++..+|+.|
T Consensus 202 ~a~~~~~---~----~~~l~ivG~-----g~~~----~~l~~~~~~~~l~------~~v~f-~G~~~~~~~~~~~~~~~~ 258 (359)
T PRK09922 202 DGLSQTT---G----EWQLHIIGD-----GSDF----EKCKAYSRELGIE------QRIIW-HGWQSQPWEVVQQKIKNV 258 (359)
T ss_pred HHHHhhC---C----CeEEEEEeC-----CccH----HHHHHHHHHcCCC------CeEEE-ecccCCcHHHHHHHHhcC
Confidence 9998762 2 356887863 3332 3444555544321 13554 6765 458999999999
Q ss_pred cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeC-CCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCH
Q 002314 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (937)
Q Consensus 461 Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe-~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (937)
|++|+||..||||++++|||||+ .|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+.
T Consensus 259 d~~v~~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 259 SALLLTSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred cEEEECCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999999994 7999998 78877777 678999999999999999999998874
No 77
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.82 E-value=4e-19 Score=193.98 Aligned_cols=195 Identities=15% Similarity=0.220 Sum_probs=123.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc-----eE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l-----~l 664 (937)
..||||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++ ++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 66 (270)
T PRK10513 2 AIKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYC 66 (270)
T ss_pred ceEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeE
Confidence 3689999999999976 34689999999999987 6999999999999999988887753 58
Q ss_pred EeeCceEEEe--cCCe-eeeccccccChhHHHHHHHHHHHHHh-----cCCCceeeeecce-----------EEEEeecc
Q 002314 665 AAENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTE-----RTPRSHFEQRETS-----------LVWNYKYA 725 (937)
Q Consensus 665 iaenG~~ir~--~~~~-w~~~~~~~~~~~w~~~v~~il~~~~~-----~~~Gs~iE~K~~s-----------l~~hyr~a 725 (937)
|+.||+.+.. .++. +... .+.+....+.++++...- ...+.+...+... +...+...
T Consensus 67 I~~NGa~i~~~~~~~~i~~~~----l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (270)
T PRK10513 67 ITNNGALVQKAADGETVAQTA----LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREV 142 (270)
T ss_pred EEcCCeEEEECCCCCEEEecC----CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccch
Confidence 9999999985 2322 3222 232222223333322100 0011111111100 00000000
Q ss_pred ---Ch--hh------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCce
Q 002314 726 ---DV--EF------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDY 792 (937)
Q Consensus 726 ---d~--e~------~-~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~ 792 (937)
++ .. . .....++...+ ...+. ..+.++ .+..++||.|+|+|||.||++|+++++ ++.++
T Consensus 143 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~~~~ 214 (270)
T PRK10513 143 EKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IKPEE 214 (270)
T ss_pred hhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CCHHH
Confidence 00 00 0 01112222333 21111 234544 467899999999999999999999998 57899
Q ss_pred EEEEecCCCCcHHHHHhcCc
Q 002314 793 VLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 793 vl~iGD~d~nDEdMf~~~~~ 812 (937)
+++||| +.||.+||+.++.
T Consensus 215 v~afGD-~~NDi~Ml~~ag~ 233 (270)
T PRK10513 215 VMAIGD-QENDIAMIEYAGV 233 (270)
T ss_pred EEEECC-chhhHHHHHhCCc
Confidence 999999 9999999999864
No 78
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.82 E-value=3e-18 Score=197.35 Aligned_cols=281 Identities=16% Similarity=0.132 Sum_probs=180.0
Q ss_pred HHHHHHHHHhC--CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccC----CCchhhhccCccch----------HHH
Q 002314 219 QMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP----FPSSEIHRTLPSRS----------DLL 282 (937)
Q Consensus 219 ~~fA~~i~~~~--~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~P----fPs~e~fr~lp~r~----------eil 282 (937)
..+...+.+.. .+.|+|++|...+. .++.....++|..+..|-- |+..-.....|.+. .+-
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 166 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYE 166 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHH
Confidence 34444555554 35699999864332 3343233467777777742 21100000111110 000
Q ss_pred -HhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-
Q 002314 283 -RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF- 360 (937)
Q Consensus 283 -~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~- 360 (937)
..+-.+|.|.+.+....+.+.+ .. .....++.++|+|||.+.|.+..... ..+
T Consensus 167 ~~~~~~ad~vi~~S~~~~~~l~~----~~-----------~~~~~~v~vipngvd~~~f~~~~~~~----------~~~~ 221 (397)
T TIGR03087 167 RAIAARFDAATFVSRAEAELFRR----LA-----------PEAAGRITAFPNGVDADFFSPDRDYP----------NPYP 221 (397)
T ss_pred HHHHhhCCeEEEcCHHHHHHHHH----hC-----------CCCCCCeEEeecccchhhcCCCcccc----------CCCC
Confidence 1223567777777665554432 10 11235788999999999886532110 011
Q ss_pred cCCcEEEEEecccccCCHHHHH----HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCC
Q 002314 361 AGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (937)
Q Consensus 361 ~~~~iIL~VdRld~~KGi~~~l----~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~ 436 (937)
.++++|+++||+++.||++.++ +++..+.+++|+++ |+++|. +++ .+++++...
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~~~-------- 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALAAL-------- 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhccC--------
Confidence 3567899999999999999887 56666777788765 777753 221 123333211
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-CCceEEECCCCH
Q 002314 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNI 514 (937)
Q Consensus 437 ~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~ 514 (937)
..|+ +.|.++ ++..+|+.||++|+||. .||++++++|||||+ .|+|+|..++..... +..|++|. .|+
T Consensus 280 --~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~~~ 349 (397)
T TIGR03087 280 --PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-ADP 349 (397)
T ss_pred --CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-CCH
Confidence 1355 467876 68899999999999997 599999999999994 688888754321111 34688886 899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHH
Q 002314 515 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (937)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~ 560 (937)
+++|++|.++++++ +.+.++.+++++++ +.|+|...++++.+-+.
T Consensus 350 ~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 350 ADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999999999864 56777778888887 67999999998876553
No 79
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.81 E-value=6.9e-18 Score=187.49 Aligned_cols=258 Identities=19% Similarity=0.208 Sum_probs=177.2
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+|++|.+..+.++.+...+..++|+.+++|-.++.. +....+.. ..|.+...+....+.|..
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~~---~~d~ii~~s~~~~~~~~~------ 160 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFKK---GGDAVIAPSRFLLDRYVA------ 160 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhcc---CCCEEEEeCHHHHHHHHH------
Confidence 359999998755543333222234689999999654321 11111111 128888887765555443
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
+.....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 161 ----------~~~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 161 ----------NGLFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred ----------cCCCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 0111357899999999987754211 012456789999999999999999999998866
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-~ 469 (937)
++ +.|+++|... ......... ..+ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~~~-----~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESYEL-----EGD--------PRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHHhh-----cCC--------CeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 44 4577776432 111111111 111 1355 4789999999999999999999997 7
Q ss_pred cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCC
Q 002314 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (937)
Q Consensus 470 EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~ 547 (937)
||+|++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++.+ +.++.+.++.++.+..
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHHhHHHhhhH--
Confidence 99999999999994 789999988888877 44799999999999999999999854 4556666666665543
Q ss_pred HHHHHHHHHHH
Q 002314 548 AQEWAETFVSE 558 (937)
Q Consensus 548 ~~~W~~~fl~~ 558 (937)
..+++++++.
T Consensus 347 -~~~~~~~~~~ 356 (359)
T cd03823 347 -EDQAEEYLKL 356 (359)
T ss_pred -HHHHHHHHHH
Confidence 5555555443
No 80
>PHA01630 putative group 1 glycosyl transferase
Probab=99.81 E-value=4.3e-18 Score=191.31 Aligned_cols=213 Identities=13% Similarity=0.110 Sum_probs=152.8
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEE
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 366 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iI 366 (937)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 488888888765555432 1111 1246889999999998864311 01234456
Q ss_pred EEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 002314 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (937)
Q Consensus 367 L~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~ 446 (937)
++++|+.+.||++.+|+|++.+.+++|++ .|+++|. +.. +. + +. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG~-----~~~--~~--~---l~-~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKSS-----NML--DP--R---LF-GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEeC-----ccc--ch--h---hc-ccc------c------eec
Confidence 67778999999999999999998887764 4776762 111 11 1 10 011 1 135
Q ss_pred CCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEE---------------
Q 002314 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV--------------- 509 (937)
Q Consensus 447 ~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllV--------------- 509 (937)
.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|..+|..+.+ |.+|++|
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999994 799999988878877 5566665
Q ss_pred -----CCCCHHHHHHHHHHHHcCC-HHHHHHHHH-hhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 510 -----NPWNITEVANAIARALNMS-PEEREKRHW-HNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 510 -----nP~D~~~lA~aI~~aL~m~-~~er~~r~~-~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
+| |.++++++|.++|.++ ++++++++. ......+++++...++++++.+++
T Consensus 273 ~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 44 7889999999999874 234444444 445567999999999999887753
No 81
>PRK10976 putative hydrolase; Provisional
Probab=99.80 E-value=1.7e-18 Score=188.63 Aligned_cols=192 Identities=16% Similarity=0.233 Sum_probs=123.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..++ .++|+.|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 489999999999976 34689999999999986 699999999999999998888774 4789999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCce--eeeecceE-----------------EEEeec---cC
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH--FEQRETSL-----------------VWNYKY---AD 726 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~--iE~K~~sl-----------------~~hyr~---ad 726 (937)
|+.+...++.. +.....+. +.+.++++...+ .++.. +....... .+.... ..
T Consensus 67 Ga~i~~~~~~~--i~~~~l~~---~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLDR---DIASDLFGVVHD-NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLE 140 (266)
T ss_pred CcEEECCCCCE--ehhhcCCH---HHHHHHHHhhcc-cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcc
Confidence 99998533321 11112332 333444433211 11110 11000000 000000 00
Q ss_pred h-hh--------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEE
Q 002314 727 V-EF--------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 796 (937)
Q Consensus 727 ~-e~--------~~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~i 796 (937)
. .. ......++.+.+ ...+. ..+.+. .+..++||.|+++|||.||++|+++++ ++.+++++|
T Consensus 141 ~~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viaf 212 (266)
T PRK10976 141 PDGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAF 212 (266)
T ss_pred cCCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEE
Confidence 0 00 000112222333 21111 234543 456799999999999999999999999 678999999
Q ss_pred ecCCCCcHHHHHhcCc
Q 002314 797 GHFLGKDEDVYAFFEP 812 (937)
Q Consensus 797 GD~d~nDEdMf~~~~~ 812 (937)
|| +.||.+||+.++.
T Consensus 213 GD-~~NDi~Ml~~ag~ 227 (266)
T PRK10976 213 GD-GMNDAEMLSMAGK 227 (266)
T ss_pred cC-CcccHHHHHHcCC
Confidence 99 9999999999976
No 82
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.80 E-value=1.2e-17 Score=184.30 Aligned_cols=273 Identities=20% Similarity=0.131 Sum_probs=191.1
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCc--cchHH-HHhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDL-LRAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp--~r~ei-l~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
..|+|++|..+..++..++++.....++.+++|...+... ..... ....+ ...+-.+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 4599999988777777777665566778888886532111 00000 00111 112335789988888777665541
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ 387 (937)
+. ......+.+.|+|+|.+.+...... ...++..|+++||+.+.||+..+++|+..
T Consensus 157 ---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 ---GI---------IKKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred ---cC---------CCcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 00 0013467788999999877543110 12467899999999999999999999999
Q ss_pred hHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECC
Q 002314 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (937)
Q Consensus 388 ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~S 467 (937)
+.+++|++ .|+++|..... ++ .... ++...+. . ..|.+ .|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~~----~l~i~G~~~~~---~~--~~~~---~~~~~~~----~--~~v~~-~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPNV----RLLLVGDGDEE---NP--AAIL---EIEKLGL----E--GRVEF-LGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCCe----EEEEEcCCCcc---hh--hHHH---HHHhcCC----c--ceEEE-eec--cccHHHHHHhccEEEecC
Confidence 98877764 47777643311 11 1111 1222211 1 23555 454 678999999999999999
Q ss_pred CCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh-hh
Q 002314 468 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 544 (937)
Q Consensus 468 l~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-V~ 544 (937)
..||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++..+++++ ..
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999994 789999999988887 56799999999999999999988765 4566667777777 58
Q ss_pred cCCHHHHHHHHH
Q 002314 545 THTAQEWAETFV 556 (937)
Q Consensus 545 ~~~~~~W~~~fl 556 (937)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 899999988775
No 83
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.79 E-value=1.7e-17 Score=184.57 Aligned_cols=242 Identities=19% Similarity=0.146 Sum_probs=166.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
..|+||+|+....++ + .+..+.|+.+++|..+.... ..........+.+.+-+......+..
T Consensus 87 ~~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~~~~~------ 148 (335)
T cd03802 87 DFDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPEL--------LKLYYAARPDVPFVSISDAQRRPWPP------ 148 (335)
T ss_pred CCCEEEecCcccchh---h-hcccCCCEEEEecCCCCccc--------chHHHhhCcCCeEEEecHHHHhhccc------
Confidence 469999999887766 2 23457889999998754211 11333444555555444432221110
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~ 390 (937)
. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+.+
T Consensus 149 -------------~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 149 -------------L-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred -------------c-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 1 567899999999888641 1246789999999999999999999754
Q ss_pred hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-C
Q 002314 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (937)
Q Consensus 391 ~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-~ 469 (937)
++ +.|+++|... ..+ .+...+.+... ++ ..|+| .|.++.+++..+|+.||++|+||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~~-~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIEY-LGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEEE-eCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4477776432 111 12222222110 11 13664 799999999999999999999997 5
Q ss_pred cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhh-hhcC
Q 002314 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (937)
Q Consensus 470 EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~-V~~~ 546 (937)
||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++.++.+. .++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~~-------~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRAA-------CRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHHH-------HHHHHHHhC
Confidence 99999999999994 799999999888877 447999987 999999999998754221 1222 3667
Q ss_pred CHHHHHHHHHH
Q 002314 547 TAQEWAETFVS 557 (937)
Q Consensus 547 ~~~~W~~~fl~ 557 (937)
++..-++++++
T Consensus 322 s~~~~~~~~~~ 332 (335)
T cd03802 322 SAARMVDDYLA 332 (335)
T ss_pred CHHHHHHHHHH
Confidence 87777777665
No 84
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.79 E-value=1.3e-17 Score=186.60 Aligned_cols=266 Identities=23% Similarity=0.214 Sum_probs=179.5
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
...|+|++|+...+.....+.. ..+.+..+++|........+..+ ...-....+..+|.|.+.+..+.+.+.. .
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~ 155 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLL-PRKKPVVVHWHSDIVKQKLLLKL-YRPLQRRFLRRADAIVATSPNYAETSPV----L 155 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHh-ccCceEEEEEcChhhccchhhhh-hhHHHHHHHHhcCEEEeCcHHHHHHHHH----h
Confidence 4669999998654433222222 24678888899643211111000 0111222455788888877765554322 1
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
.....++.++|+|+|.+.|..... . .........++++|+++||+.+.||+..+++|++++.
T Consensus 156 ------------~~~~~~~~~i~~gi~~~~~~~~~~---~---~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 217 (357)
T cd03795 156 ------------RRFRDKVRVIPLGLDPARYPRPDA---L---EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP 217 (357)
T ss_pred ------------cCCccceEEecCCCChhhcCCcch---h---hhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc
Confidence 111256889999999987764311 0 0011111246789999999999999999999998874
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (937)
++.|+++|. ++.. .++.+++.+.+. . ..|+ +.|.++.+++..+|+.||++++||.
T Consensus 218 --------~~~l~i~G~-----g~~~----~~~~~~~~~~~~----~--~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~~ 273 (357)
T cd03795 218 --------DAPLVIVGE-----GPLE----AELEALAAALGL----L--DRVR-FLGRLDDEEKAALLAACDVFVFPSVE 273 (357)
T ss_pred --------CcEEEEEeC-----ChhH----HHHHHHHHhcCC----c--ceEE-EcCCCCHHHHHHHHHhCCEEEeCCcc
Confidence 355777763 2222 234444433221 1 2466 4799999999999999999999996
Q ss_pred -CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 469 -RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 469 -~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
.||||++++|||+|+ .|+|+|+..|..+.+ +.+|++++|.|+++++++|.++++++ +++.++.+++++++.
T Consensus 274 ~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~ 348 (357)
T cd03795 274 RSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERAE 348 (357)
T ss_pred cccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHH
Confidence 599999999999994 788888888887765 56899999999999999999999865 566777777787764
Q ss_pred -cCCH
Q 002314 545 -THTA 548 (937)
Q Consensus 545 -~~~~ 548 (937)
.+++
T Consensus 349 ~~~s~ 353 (357)
T cd03795 349 EEFTA 353 (357)
T ss_pred Hhcch
Confidence 3444
No 85
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.79 E-value=1.4e-17 Score=193.23 Aligned_cols=267 Identities=9% Similarity=-0.023 Sum_probs=175.4
Q ss_pred CCCCEEEEeCcccc--h-HHHHHHhhCCCCeEEEEEccCCCchhhhccCccc-------hHHHHhh-hcCCEEEEeCHHH
Q 002314 230 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-------SDLLRAV-LAADLVGFHTYDY 298 (937)
Q Consensus 230 ~~~DvVwvHDyhl~--l-lp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r-------~eil~~l-l~aDlIgF~t~~~ 298 (937)
+..|+|++|....+ . ++.++++ ..+.|+++.+|--+++..-. ..+.. ..+-+.+ -.||.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985532 2 2333333 34789999999754321100 01100 1111111 2478777776654
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHH---------------H--hc
Q 002314 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------T--FA 361 (937)
Q Consensus 299 ~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~---------------~--~~ 361 (937)
.+.+.+ +.....+|.++|+| +...|.+.... .....+.+ . -.
T Consensus 172 ~~~l~~----------------~~~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ----------------FNNWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh----------------hhccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 333221 11234678899999 55667653211 11111111 0 02
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHhHHh------CcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEE------NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~ll~~------~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~ 435 (937)
+..+++++||+.+.||+..+|+|+..+.+. +|+ +.|+++|. ++. ++++++++.+.+
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG~-----G~~----~~~l~~~~~~~~----- 292 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITGK-----GPL----KEKYLERIKELK----- 292 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEec-----Ccc----HHHHHHHHHHcC-----
Confidence 345788999999999999999999998763 344 55887763 332 234555554433
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECC---CCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEEC
Q 002314 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN 510 (937)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~S---l~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVn 510 (937)
...++++.+.++.+++..+|+.||++|+++ ..+||+++++|||||+ .|+|+|...|..+.+ |.+|++|+
T Consensus 293 --l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~ 366 (415)
T cd03816 293 --LKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG 366 (415)
T ss_pred --CCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC
Confidence 125777788899999999999999999743 3588999999999994 789999988888877 66899994
Q ss_pred CCCHHHHHHHHHHHHcCC--HHHHHHHHHhhhhhhhc
Q 002314 511 PWNITEVANAIARALNMS--PEEREKRHWHNFTHVTT 545 (937)
Q Consensus 511 P~D~~~lA~aI~~aL~m~--~~er~~r~~~~~~~V~~ 545 (937)
|++++|++|.++++++ ++++.++.+++++..+.
T Consensus 367 --d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 367 --DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred --CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 9999999999999982 56777777777777643
No 86
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.78 E-value=4.9e-18 Score=180.07 Aligned_cols=181 Identities=18% Similarity=0.216 Sum_probs=118.7
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeCceE
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaenG~~ 671 (937)
|++|+||||++. +..++++++++|++|.+ .|+.|+++|||+...+..++..++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 689999999976 34588999999999986 699999999999999988877764 5799999999
Q ss_pred EEecCC---eeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC
Q 002314 672 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (937)
Q Consensus 672 ir~~~~---~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~ 748 (937)
+...++ .|... ....|................-.+.. ...+.......+++ .+.++...+ .
T Consensus 66 i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~-~----- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAY----LEEEWFLDIVIAKTFPFSRLKVQYPR--RASLVKMRYGIDVD----TVREIIKEL-G----- 129 (225)
T ss_pred EEeCCCCceEEecc----cCHHHHHHHHHhcccchhhhcccccc--ccceEEEeecCCHH----HHHHHHHhc-C-----
Confidence 986432 24322 23334322111110000000000000 01111111111222 123333333 1
Q ss_pred CCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 749 ~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..+.+..+...+||.|++++||.||++++++++ ++.+++++||| +.||++||+.++.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 186 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGF 186 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCc
Confidence 123334556799999999999999999999998 56899999999 9999999999865
No 87
>PLN02887 hydrolase family protein
Probab=99.78 E-value=1.1e-17 Score=198.42 Aligned_cols=198 Identities=13% Similarity=0.180 Sum_probs=125.0
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
++.|+ .+.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+..++..+++
T Consensus 301 ~~~~~-~~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 301 LRFYK-PKFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred hhhhc-cCccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCc
Confidence 34444 46899999999999976 35689999999999987 6999999999999999888876632
Q ss_pred -----------eEEeeCceEEEecCCe--eeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEE---------E
Q 002314 663 -----------WLAAENGMFLRCTTGK--WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV---------W 720 (937)
Q Consensus 663 -----------~liaenG~~ir~~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~---------~ 720 (937)
++|+.||+.+...++. +... .+. +.+.++++...+..-...+...+.... +
T Consensus 365 ~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~~---e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~ 437 (580)
T PLN02887 365 AGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LDQ---EVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSL 437 (580)
T ss_pred ccccceEeecccEEeecCeEEEECCCcEEEEEe----CCH---HHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHH
Confidence 3567799999852222 3332 232 334444433222100001111000000 0
Q ss_pred Ee--e--c---c-Ch-hh------------h--HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHH
Q 002314 721 NY--K--Y---A-DV-EF------------G--RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRI 776 (937)
Q Consensus 721 hy--r--~---a-d~-e~------------~--~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~L 776 (937)
++ . . . +. ++ . ......+...+ ...+. ..+.++ .+..++||.|+|+|||.||++|
T Consensus 438 ~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~L 515 (580)
T PLN02887 438 HTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKML 515 (580)
T ss_pred HHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHHH
Confidence 00 0 0 0 00 00 0 00011222222 22121 135544 4678999999999999999999
Q ss_pred HHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 777 LAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 777 l~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+++++ ++.+++++||| +.||.+||+.++.
T Consensus 516 ~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~ 544 (580)
T PLN02887 516 LNHLG------VSPDEIMAIGD-GENDIEMLQLASL 544 (580)
T ss_pred HHHcC------CCHHHEEEEec-chhhHHHHHHCCC
Confidence 99999 67899999999 9999999999864
No 88
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.78 E-value=4e-17 Score=183.41 Aligned_cols=268 Identities=16% Similarity=0.050 Sum_probs=178.5
Q ss_pred CCCEEEEeCcccc--hHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHH-----HhhhcCCEEEEeCHHHHHHHH
Q 002314 231 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 231 ~~DvVwvHDyhl~--llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil-----~~ll~aDlIgF~t~~~~~~Fl 303 (937)
..|+++||..... .+..+++. .+.++.+.+|..-.....+.. + ...++ ..+..+|.|.+.+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3466666654433 33333433 378888888863111111110 0 11111 134467888887765444432
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCcEEEEEecccccCCHHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQK 381 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIL~VdRld~~KGi~~~ 381 (937)
. .. |... .++|+|+|...+.+. ...++.+ .+++.|+++||+.+.||+..+
T Consensus 160 ~----~~------------~~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 E----KY------------GRDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred H----hc------------CCCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 11 1111 789999998766430 0112222 355678999999999999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|+.++.. ++.|+++|.... .. .+.+++.+. ++.. ..|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~--~~---~~~~~~~~~-------~~~~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADH--NT---PYGKLLKEK-------AAAD--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCC--cc---hHHHHHHHH-------hCCC--CcEE-EccccChHHHHHHHHhCC
Confidence 999987632 355887875321 11 233333321 1111 2365 479999999999999999
Q ss_pred EEEECCCC-cCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhh
Q 002314 462 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (937)
Q Consensus 462 v~vv~Sl~-EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (937)
++++||.. ||||++++|||||+ .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+.++.++.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999994 799999988888877678999998776 999999999976 45566667777
Q ss_pred hhhh-cCCHHHHHHHHHHHH
Q 002314 541 THVT-THTAQEWAETFVSEL 559 (937)
Q Consensus 541 ~~V~-~~~~~~W~~~fl~~l 559 (937)
+.+. .++|..-++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 589999888887654
No 89
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.78 E-value=2e-17 Score=176.54 Aligned_cols=184 Identities=17% Similarity=0.304 Sum_probs=124.0
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeCceE
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaenG~~ 671 (937)
||+|+||||++. ...++++++++|++|.+ .|+.++|+|||++..+.+++..++ .++|+.||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 789999999986 24589999999999997 599999999999999999999884 5999999999
Q ss_pred EEecCCeeeeccccccChhHHHHHHHHHHHHHhcC-------C-Cceeeee-----------c-----------------
Q 002314 672 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT-------P-RSHFEQR-----------E----------------- 715 (937)
Q Consensus 672 ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~-------~-Gs~iE~K-----------~----------------- 715 (937)
+....++.. .....+. +.+..+++...... + +.++... .
T Consensus 66 i~~~~~~~l--~~~~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKIL--YEKPIDS---DDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEEE--EEESB-H---HHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeecccccc--hhhheec---cchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 943333321 1112333 33444444433221 1 1111111 0
Q ss_pred -ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEE
Q 002314 716 -TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (937)
Q Consensus 716 -~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl 794 (937)
..+.++ .+++ ....+...+ ...+...-..+..+..++||.|+++|||.|+++|+++++ ++.+.++
T Consensus 141 i~ki~~~---~~~~----~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFF---PDPE----DLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEE---SCHH----HHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeecc---ccch----hhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 011111 0111 222333333 221221113345678999999999999999999999998 5789999
Q ss_pred EEecCCCCcHHHHHhcCc
Q 002314 795 CIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 795 ~iGD~d~nDEdMf~~~~~ 812 (937)
+||| +.||++||+.++.
T Consensus 207 ~~GD-~~ND~~Ml~~~~~ 223 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAGY 223 (254)
T ss_dssp EEES-SGGGHHHHHHSSE
T ss_pred Eeec-ccccHhHHhhcCe
Confidence 9999 9999999999976
No 90
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.77 E-value=2.9e-17 Score=185.24 Aligned_cols=248 Identities=20% Similarity=0.173 Sum_probs=168.0
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCC----ch-hhhccCcc-------------chHHHHhhhcCCEE
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPS-------------RSDLLRAVLAADLV 291 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfP----s~-e~fr~lp~-------------r~eil~~ll~aDlI 291 (937)
.+.|+|+++...... ..+ ..+..+..+++|.|.+ .. .+....+. +....+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~~--~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVAK--GVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHhc--ccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 367999876532221 112 3457788888898621 11 11111110 00112234577888
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEec
Q 002314 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371 (937)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdR 371 (937)
...+....+.+.. .. + .+..++|+|+|.+.|.+.. ..+++++++||
T Consensus 158 i~~S~~~~~~~~~----~~------------~--~~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YY------------G--RDATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----Hh------------C--CCcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 8777765555532 11 1 1235789999998875421 23567999999
Q ss_pred ccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHH
Q 002314 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451 (937)
Q Consensus 372 ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~ 451 (937)
+.+.||++.+++|++++ | + .|+++|. +++...+ ++ ... ..|.| .|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-~----~l~ivG~-----g~~~~~l----~~---~~~--------~~V~~-~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-K----RLVVIGD-----GPELDRL----RA---KAG--------PNVTF-LGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-C----cEEEEEC-----ChhHHHH----Hh---hcC--------CCEEE-ecCCCHH
Confidence 99999999999999875 3 3 3676763 3332222 22 111 24665 7899999
Q ss_pred HHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCH
Q 002314 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (937)
Q Consensus 452 el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (937)
++..+|+.||++|+||. ||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999994 799999998888877 568999999999999999999998874
Q ss_pred HHHHHHHHhhhhhhhcCCHHHHHHH
Q 002314 530 EEREKRHWHNFTHVTTHTAQEWAET 554 (937)
Q Consensus 530 ~er~~r~~~~~~~V~~~~~~~W~~~ 554 (937)
. ..+.+++.+..+++.+..++
T Consensus 329 ~----~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 F----DPQAIRAHAERFSESRFREK 349 (351)
T ss_pred c----CHHHHHHHHHhcCHHHHHHH
Confidence 1 22333445556676666554
No 91
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.77 E-value=1.9e-17 Score=180.71 Aligned_cols=189 Identities=15% Similarity=0.190 Sum_probs=121.3
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.||||+|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+...+..++ .++|+.|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 67 (272)
T PRK10530 3 YRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCN 67 (272)
T ss_pred ccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcC
Confidence 689999999999976 34588999999999987 699999999999999999888874 4699999
Q ss_pred ceEEEec-CCe--eeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecc------------------eEEE----Eee
Q 002314 669 GMFLRCT-TGK--WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET------------------SLVW----NYK 723 (937)
Q Consensus 669 G~~ir~~-~~~--w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~------------------sl~~----hyr 723 (937)
|+.+... ++. +... .+. +.+.++++......-...+..... .+.. .+.
T Consensus 68 Ga~i~d~~~~~~l~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (272)
T PRK10530 68 GTYLYDYQAKKVLEADP----LPV---QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFT 140 (272)
T ss_pred CcEEEecCCCEEEEecC----CCH---HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceE
Confidence 9999852 232 2222 232 334444443322110111100000 0000 000
Q ss_pred ccCh--hh----h-----------HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhccccc
Q 002314 724 YADV--EF----G-----------RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKK 785 (937)
Q Consensus 724 ~ad~--e~----~-----------~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~ 785 (937)
..+. +. . .....++.+.+ ....++.+. .+..++||.|.+++||.|+++++++++
T Consensus 141 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g---- 212 (272)
T PRK10530 141 QVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV----EHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG---- 212 (272)
T ss_pred EcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH----hhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC----
Confidence 0000 00 0 00011222222 112233332 345689999999999999999999998
Q ss_pred CCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 786 MKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 786 ~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
++.+++++||| +.||.+||+.++.
T Consensus 213 --i~~~e~i~~GD-~~NDi~m~~~ag~ 236 (272)
T PRK10530 213 --WSMKNVVAFGD-NFNDISMLEAAGL 236 (272)
T ss_pred --CCHHHeEEeCC-ChhhHHHHHhcCc
Confidence 57899999999 9999999999864
No 92
>PTZ00174 phosphomannomutase; Provisional
Probab=99.77 E-value=2.2e-17 Score=178.25 Aligned_cols=198 Identities=18% Similarity=0.212 Sum_probs=123.7
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc---C-ceE
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---N-LWL 664 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~-l~l 664 (937)
.+.|||++|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 46799999999999976 35689999999999987 69999999999999998888743 2 367
Q ss_pred EeeCceEEEecCCe-eeeccccccChhHHHHHHHHHHHHH-----hcCCCceeeeecceEEEEee-ccC-h----hhh--
Q 002314 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK-YAD-V----EFG-- 730 (937)
Q Consensus 665 iaenG~~ir~~~~~-w~~~~~~~~~~~w~~~v~~il~~~~-----~~~~Gs~iE~K~~sl~~hyr-~ad-~----e~~-- 730 (937)
|+.||+.+...++. +...++...+.++...+.+.++.+. ....+.+++.......+.+. ... . ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 99999999864332 2222211133344444444443321 11123333322111111110 000 0 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecC---CCCc
Q 002314 731 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKD 803 (937)
Q Consensus 731 ---~~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~nD 803 (937)
.....++.+.+ ...+....+.... |..++||.|+|+|||.||+.|+++ .++|++|||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 00112344444 3323322333343 357999999999999999999987 3689999992 3799
Q ss_pred HHHHHhcCc
Q 002314 804 EDVYAFFEP 812 (937)
Q Consensus 804 EdMf~~~~~ 812 (937)
++||+.++.
T Consensus 217 ieMl~~~~~ 225 (247)
T PTZ00174 217 YEIYNDPRT 225 (247)
T ss_pred HhhhhcCCC
Confidence 999997644
No 93
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.76 E-value=9.1e-18 Score=181.42 Aligned_cols=191 Identities=17% Similarity=0.251 Sum_probs=129.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC----ceEEe
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAA 666 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~----l~lia 666 (937)
+.+|++|+||||++..+ .+..+++++.++|+++.+ .|+.++++|||+...+.++...++ -.+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 46899999999998421 134578999999999986 688999999999999998865442 34899
Q ss_pred eCceEEEecCC-----eeeeccccccChhHH-HHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHH
Q 002314 667 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (937)
Q Consensus 667 enG~~ir~~~~-----~w~~~~~~~~~~~w~-~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~ 740 (937)
+||+.|..++. .|... ....|. +.+..+...+...++....+.+...+.+.+...+ ......++...
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEY----LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHH----HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999986431 12111 112232 2344444444343444444555667776654221 11112233333
Q ss_pred HhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 741 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 741 L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
+ ... ...+.+ ..+..++||+|++++||.|+++|++.++ ++.+.+++||| +.||++||+.+
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~ 202 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIG 202 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHcc
Confidence 3 221 123443 5678899999999999999999999998 57899999999 99999999984
No 94
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.76 E-value=1e-16 Score=180.09 Aligned_cols=197 Identities=21% Similarity=0.289 Sum_probs=147.1
Q ss_pred eeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccc--cCCHHHHHHHHHHhHHh-CcCccCc
Q 002314 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGK 398 (937)
Q Consensus 325 ~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~--~KGi~~~l~Af~~ll~~-~P~~~~~ 398 (937)
..++.++|+|||.+.|.+.. ....++.+ .++.+++++++... .||+..+++|++.+.++ .|+
T Consensus 158 ~~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~---- 225 (365)
T cd03825 158 GIPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD---- 225 (365)
T ss_pred CCceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----
Confidence 35788999999998875421 11223333 34566666666654 89999999999988665 343
Q ss_pred EEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCC-HHHHHHHHHHccEEEECCCCcCCChhHH
Q 002314 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSY 477 (937)
Q Consensus 399 v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vv~Sl~EG~nLv~~ 477 (937)
+.|+++|... .. .. . .++ ..|. +.|.++ .+++..+|+.||++++||..||||++++
T Consensus 226 ~~~~i~G~~~-----~~----~~--~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~ 282 (365)
T cd03825 226 IELVVFGASD-----PE----IP--P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAI 282 (365)
T ss_pred eEEEEeCCCc-----hh----hh--c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHH
Confidence 5577665321 10 00 0 111 1355 467887 8899999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHH
Q 002314 478 EFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAET 554 (937)
Q Consensus 478 EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~ 554 (937)
|||+|+ .|+|+|..+|..+.+ +.+|+++++.|.+++|++|.++++.+ +++.++.+++++++ ..++++..+++
T Consensus 283 Eam~~g----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~ 357 (365)
T cd03825 283 EALACG----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKR 357 (365)
T ss_pred HHHhcC----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999994 789999988888877 34799999999999999999999865 45666677777776 56899999999
Q ss_pred HHHHHHH
Q 002314 555 FVSELND 561 (937)
Q Consensus 555 fl~~l~~ 561 (937)
+++-+++
T Consensus 358 ~~~~y~~ 364 (365)
T cd03825 358 YLSLYEE 364 (365)
T ss_pred HHHHHhh
Confidence 8876653
No 95
>PLN02423 phosphomannomutase
Probab=99.75 E-value=1e-16 Score=172.73 Aligned_cols=190 Identities=17% Similarity=0.231 Sum_probs=117.6
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc-C---ceEEe
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 666 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~---l~lia 666 (937)
++++|+|+||||++. +..++++++++|++|.+ . +.|+++|||+...+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 446669999999976 34588999999999985 4 999999999999998888774 1 47899
Q ss_pred eCceEEEecCCeeeec--cccccChhHHHHHHHHHHHHHhc-----CCCceeeeecceEEEEe--eccChh----hh---
Q 002314 667 ENGMFLRCTTGKWMTT--MPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETSLVWNY--KYADVE----FG--- 730 (937)
Q Consensus 667 enG~~ir~~~~~w~~~--~~~~~~~~w~~~v~~il~~~~~~-----~~Gs~iE~K~~sl~~hy--r~ad~e----~~--- 730 (937)
+||+++...+ .+... ++...+.+....+.+.++.+... ..+.+++.....+.+.+ ...... +.
T Consensus 71 ~NGa~i~~~g-~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 71 ENGLVAHKDG-KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYD 149 (245)
T ss_pred CCceEEEeCC-EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhC
Confidence 9999998533 33221 11122323333333333332111 12344443322222221 111100 00
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecC---CCCcH
Q 002314 731 --RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKDE 804 (937)
Q Consensus 731 --~~~a~el~~~L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~---d~nDE 804 (937)
.....++...+ ...+.+..+.+. .|..++||+++|+|||.||+.|+ . ++++++|||. +.||.
T Consensus 150 ~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ND~ 217 (245)
T PLN02423 150 KVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGNDH 217 (245)
T ss_pred ccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCCcH
Confidence 01112333444 222332234333 35689999999999999999998 2 6899999993 49999
Q ss_pred HHHHh
Q 002314 805 DVYAF 809 (937)
Q Consensus 805 dMf~~ 809 (937)
+|++.
T Consensus 218 eMl~~ 222 (245)
T PLN02423 218 EIFES 222 (245)
T ss_pred HHHhC
Confidence 99975
No 96
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.75 E-value=1.2e-16 Score=175.55 Aligned_cols=246 Identities=18% Similarity=0.123 Sum_probs=166.7
Q ss_pred CCCEEEEeCc-ccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDy-hl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
..|+|++|++ ...++..+.+. . +.++.+.+|..++.... ...+........+..+|.+.+.+....+.+....
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 154 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL--- 154 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHhh---
Confidence 4699999998 44444444433 3 78999999987653221 1111111234445578888888776655544311
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
+ ....++.++|+|+|.+.+...... .. . .....++.+|+++||+.+.||+..+++|+..+.
T Consensus 155 -~-----------~~~~~~~vi~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 155 -G-----------IPPDKIEVIYNPIDIEEIRALAEE-----PL-E-LGIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred -c-----------CCccccEEecCCcChhhcCcccch-----hh-h-cCCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 1 114678899999999877643211 00 0 011246788999999999999999999999998
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (937)
++++++ .|+++|.. +.. .++.+++.+.+.. ..|.+ .+.+ +++..+|+.||++++||..
T Consensus 216 ~~~~~~----~l~i~G~~-----~~~----~~~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPDA----RLVILGDG-----PLR----EELEALAKELGLA------DRVHF-LGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCCc----eEEEEcCC-----ccH----HHHHHHHHhcCCC------ccEEE-eccc--CCHHHHHHhCCEEEeCccc
Confidence 876664 47777632 222 2233444443321 13554 5654 4688999999999999999
Q ss_pred cCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH---HHHHHHHcC
Q 002314 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA---NAIARALNM 527 (937)
Q Consensus 470 EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA---~aI~~aL~m 527 (937)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|.++++ ++|..++..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999994 789999999888877 5679999999999994 555555543
No 97
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.74 E-value=2.8e-17 Score=176.13 Aligned_cols=184 Identities=15% Similarity=0.162 Sum_probs=124.2
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc----eEEeeC
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 668 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~liaen 668 (937)
||++|+||||++. +..+++.. ++|+ +. ++|+.++|+|||++..+.+++..+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~-~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GS-GDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hc-CCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 6899999999974 23355544 7776 44 46999999999999999999988743 499999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHH-----HHHHHHHHhcCCCceeeeecc--eEEEEeeccChhhhHHHHHHHHHHH
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSL-----KHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 741 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v-----~~il~~~~~~~~Gs~iE~K~~--sl~~hyr~ad~e~~~~~a~el~~~L 741 (937)
|+.+..... +. .+..|...+ ...+..+....+|..++.+.. ...++|+..+.... ...++.+.+
T Consensus 64 Ga~i~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPE-LQ------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGEP--ILPQIRQRL 134 (236)
T ss_pred CceEEeCCC-CC------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccch--HHHHHHHHH
Confidence 999864221 10 011121111 111234445577777776652 45677775322111 123334444
Q ss_pred hcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 742 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 742 ~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.... ..+.+ ..+..++|+.|+++|||.|++.|+++++ ++++.+++||| +.||++||+.+..
T Consensus 135 -~~~~--~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~~ 196 (236)
T TIGR02471 135 -RQQS--QAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLTL 196 (236)
T ss_pred -Hhcc--CCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCCc
Confidence 3221 23443 4566789999999999999999999998 56789999999 9999999998754
No 98
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.74 E-value=4.2e-17 Score=176.76 Aligned_cols=189 Identities=16% Similarity=0.294 Sum_probs=123.0
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeCce
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaenG~ 670 (937)
|||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+...+..++ .++|+.||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999986 24688999999999987 599999999999999999988874 479999999
Q ss_pred EEEecCCe--eeeccccccChhHHHHHHHHHHHHHhcC--------CCceeeeecce-EEEE----eec----cChh---
Q 002314 671 FLRCTTGK--WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-LVWN----YKY----ADVE--- 728 (937)
Q Consensus 671 ~ir~~~~~--w~~~~~~~~~~~w~~~v~~il~~~~~~~--------~Gs~iE~K~~s-l~~h----yr~----ad~e--- 728 (937)
.+...++. +... .+. +.+.++++.+.... .+.++...... +..+ +.. .+.+
T Consensus 66 ~i~~~~~~~i~~~~----i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T TIGR00099 66 AVIDDQGEILYKKP----LDL---DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLP 138 (256)
T ss_pred EEECCCCCEEeecC----CCH---HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhh
Confidence 99864322 2222 333 33344444332211 11111110000 0000 000 0000
Q ss_pred ---h-------hHHHHHHHHHHHhcC-CCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEE
Q 002314 729 ---F-------GRIQARDMLQHLWTG-PISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 796 (937)
Q Consensus 729 ---~-------~~~~a~el~~~L~~~-~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~i 796 (937)
. ......++...+ .. .. ...+.+ ..+..++||.|+++|||.||+.+++.++ ++.+++++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~ 210 (256)
T TIGR00099 139 DDILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAF 210 (256)
T ss_pred cccceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEe
Confidence 0 001122333333 21 11 123554 4567899999999999999999999998 578999999
Q ss_pred ecCCCCcHHHHHhcCc
Q 002314 797 GHFLGKDEDVYAFFEP 812 (937)
Q Consensus 797 GD~d~nDEdMf~~~~~ 812 (937)
|| +.||.+||+.++.
T Consensus 211 GD-~~nD~~m~~~~~~ 225 (256)
T TIGR00099 211 GD-GMNDIEMLEAAGY 225 (256)
T ss_pred CC-cHHhHHHHHhCCc
Confidence 99 9999999999975
No 99
>PLN02275 transferase, transferring glycosyl groups
Probab=99.74 E-value=4.2e-16 Score=178.14 Aligned_cols=242 Identities=12% Similarity=-0.011 Sum_probs=158.2
Q ss_pred CCCCEEEEeCcccch--HHHHHHhhCCCCeEEEEEccCCCchhhhccC--c----cchHHHHhh-hcCCEEEEeCHHHHH
Q 002314 230 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL--P----SRSDLLRAV-LAADLVGFHTYDYAR 300 (937)
Q Consensus 230 ~~~DvVwvHDyhl~l--lp~~Lr~~~~~~~I~~flH~PfPs~e~fr~l--p----~r~eil~~l-l~aDlIgF~t~~~~~ 300 (937)
..+|+|++|..+.+. ++..+-.+..+.|+.+++|..+.+.-..... + ....+.+.+ -.+|.|...+....+
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~ 178 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQH 178 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 356999999877532 2333323334688988899754211000000 0 001112222 247888887776555
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHH
Q 002314 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 301 ~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~ 380 (937)
...+ . .|. ++.++|+|+ .+.|.+.... ..++ .....+++++||+.+.||+..
T Consensus 179 ~l~~----~------------~g~--~i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~~~ 230 (371)
T PLN02275 179 ELDQ----N------------WGI--RATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDFGI 230 (371)
T ss_pred HHHH----h------------cCC--CeEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCHHH
Confidence 4322 1 111 167889984 5677543110 0111 123457889999999999999
Q ss_pred HHHHHHHhHH-----------------hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 002314 381 KLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (937)
Q Consensus 381 ~l~Af~~ll~-----------------~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (937)
+++|+..+.. .+|+ +.|+++| ++++.. ++++++.+.+. ..+++
T Consensus 231 li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~----~l~~~~~~~~l-------~~v~~ 290 (371)
T PLN02275 231 LLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKA----MYEEKISRLNL-------RHVAF 290 (371)
T ss_pred HHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHH----HHHHHHHHcCC-------CceEE
Confidence 9999988742 2454 5588886 344433 44445444331 24777
Q ss_pred eCCCCCHHHHHHHHHHccEEEECC---CCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~S---l~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (937)
+.+.++.+++..+|+.||+||+|+ ..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |++++|
T Consensus 291 ~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la 364 (371)
T PLN02275 291 RTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSELA 364 (371)
T ss_pred EcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHHHH
Confidence 777899999999999999999863 2489999999999994 789999988888877 67899996 699999
Q ss_pred HHHHHHH
Q 002314 519 NAIARAL 525 (937)
Q Consensus 519 ~aI~~aL 525 (937)
++|.++|
T Consensus 365 ~~i~~l~ 371 (371)
T PLN02275 365 DQLLELL 371 (371)
T ss_pred HHHHHhC
Confidence 9998875
No 100
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.74 E-value=6.9e-17 Score=170.54 Aligned_cols=182 Identities=15% Similarity=0.204 Sum_probs=119.5
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
.|+||+|+||||++. +..+++++.++|++|++ +|+.|+|+|||+...+..++..++ .++|++|
T Consensus 1 ik~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~N 65 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAEN 65 (215)
T ss_pred CcEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEcc
Confidence 379999999999975 34689999999999987 699999999999999999888774 4799999
Q ss_pred ceEEEecCCeeeeccccccChhHHHHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC
Q 002314 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (937)
Q Consensus 669 G~~ir~~~~~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~ 748 (937)
|+.+...++. ....+ ....|........ .+....-...+ ....+.+... ... ...+...+ ..
T Consensus 66 Ga~i~~~~~~-~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~l-~~---- 127 (215)
T TIGR01487 66 GGVIFYNKED-IFLAN--MEEEWFLDEEKKK-RFPRDRLSNEY--PRASLVIMRE--GKD-----VDEVREII-KE---- 127 (215)
T ss_pred CcEEEeCCCc-EEEec--ccchhhHHHhhhh-hhhhhhccccc--ceeEEEEecC--Ccc-----HHHHHHHH-Hh----
Confidence 9999864332 11110 1111211000000 00000000000 0111111111 111 11222233 21
Q ss_pred CCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 749 ~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.++.+..+...+||.|.+++||.|+++++++++ ++.+.+++||| +.||++||+.++.
T Consensus 128 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~ 184 (215)
T TIGR01487 128 RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGF 184 (215)
T ss_pred CCeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCC
Confidence 245655566789999999999999999999998 46788999999 9999999999976
No 101
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.73 E-value=8.2e-17 Score=170.56 Aligned_cols=184 Identities=15% Similarity=0.124 Sum_probs=119.2
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC---ceEEeeCc
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 669 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~---l~liaenG 669 (937)
+|++|+||||++.. ..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~~--------------~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCCC--------------CCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 58999999999762 2244559999999976 699999999999999999998874 46999999
Q ss_pred eEEEecCCeeee-----ccccccChhHHHHHHHHHHHHHhcCCC-ceee-----------------------eecceEEE
Q 002314 670 MFLRCTTGKWMT-----TMPEHLNMEWVDSLKHVFEYFTERTPR-SHFE-----------------------QRETSLVW 720 (937)
Q Consensus 670 ~~ir~~~~~w~~-----~~~~~~~~~w~~~v~~il~~~~~~~~G-s~iE-----------------------~K~~sl~~ 720 (937)
+.+.... .|+. ......+ | +.+.++++.......- .... .......+
T Consensus 66 a~i~~~~-~~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (221)
T TIGR02463 66 AAIHLEE-LWREEPGYPRIILGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPL 141 (221)
T ss_pred cEEEcCc-ccccCCCceEEecCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccE
Confidence 9998521 1110 0001122 2 2344444432211000 0000 00111111
Q ss_pred EeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCC
Q 002314 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 800 (937)
Q Consensus 721 hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d 800 (937)
... .+++ ...++.+.+ .. .++.+..+..++||.|.+++||.|+++++++++ ++.+++++||| +
T Consensus 142 ~~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~ 204 (221)
T TIGR02463 142 LWR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-G 204 (221)
T ss_pred Eec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-C
Confidence 110 1111 112222223 21 245666677889999999999999999999998 57899999999 9
Q ss_pred CCcHHHHHhcCc
Q 002314 801 GKDEDVYAFFEP 812 (937)
Q Consensus 801 ~nDEdMf~~~~~ 812 (937)
.||++||++++.
T Consensus 205 ~NDi~ml~~ag~ 216 (221)
T TIGR02463 205 PNDLPLLEVADY 216 (221)
T ss_pred HHHHHHHHhCCc
Confidence 999999999875
No 102
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.8e-15 Score=175.60 Aligned_cols=319 Identities=21% Similarity=0.194 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCcccchHHHHHHhh---CCCCeEEEEEccC-----CC-chhhhccCcc
Q 002314 210 QFAAYIKANQMFADVVNKHYK---DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPS 277 (937)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~---~~DvVwvHDyhl~llp~~Lr~~---~~~~~I~~flH~P-----fP-s~e~fr~lp~ 277 (937)
.+..+..+.++-++-+ +.+. .+||||+||||+-|+|.++++. ...++.+|++|.- |+ .....-.||.
T Consensus 107 ~~~Rf~~F~~a~~~~~-~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~ 185 (487)
T COG0297 107 NAERFAFFSLAAAELA-PLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF 185 (487)
T ss_pred HHHHHHHHHHHHHHHh-hhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH
Confidence 3445554444444433 2223 5799999999999999999996 7789999999953 33 1111223341
Q ss_pred -------------chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhh
Q 002314 278 -------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 344 (937)
Q Consensus 278 -------------r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~ 344 (937)
-.-+--++..||.|..-++.|++.-.. ...|. .....+.+ +.-++.-|=||||.+...+..
T Consensus 186 ~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~ 259 (487)
T COG0297 186 EAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPET 259 (487)
T ss_pred HHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCccc
Confidence 123345577888888888888775441 00000 00011111 225666777899987765532
Q ss_pred cC-------Cc----hHHHHHHHHHHhc-----CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCC
Q 002314 345 EI-------NP----VQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 408 (937)
Q Consensus 345 ~~-------~~----~~~~~~~lr~~~~-----~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~ 408 (937)
.. .+ -.+-...|++.++ +.+++..|+||+..||++.+++|+..|+++. ++ ||++|.+
T Consensus 260 d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g- 332 (487)
T COG0297 260 DPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG- 332 (487)
T ss_pred ccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-
Confidence 11 00 1112334555552 4589999999999999999999999999986 43 7777643
Q ss_pred CCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCc
Q 002314 409 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 488 (937)
Q Consensus 409 r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g 488 (937)
.+ .+...+..++.++..++. +.-..+..--..+|..||++++||..|++||+-+++|.-+ +
T Consensus 333 ---d~---~le~~~~~la~~~~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----t 393 (487)
T COG0297 333 ---DP---ELEEALRALASRHPGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----T 393 (487)
T ss_pred ---cH---HHHHHHHHHHHhcCceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----C
Confidence 12 567788888887765322 2334456666789999999999999999999999999984 7
Q ss_pred eEEEeCCCCccccc-C---------CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh--hcCCHHHHHHHHH
Q 002314 489 VLILSEFAGAAQSL-G---------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV--TTHTAQEWAETFV 556 (937)
Q Consensus 489 ~lVlSe~aG~~~~l-g---------~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V--~~~~~~~W~~~fl 556 (937)
++|+.+.+|.++.+ . .+|+++.|.|.++++.+|.+|+..-..... .++...... ..++|+.-+.+++
T Consensus 394 vpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~ 472 (487)
T COG0297 394 LPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYV 472 (487)
T ss_pred cceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHH
Confidence 99999999999887 2 468999999999999999999975432111 022222222 4677888788777
Q ss_pred HHHHHh
Q 002314 557 SELNDT 562 (937)
Q Consensus 557 ~~l~~~ 562 (937)
+-.+..
T Consensus 473 ~lY~~~ 478 (487)
T COG0297 473 ELYKPL 478 (487)
T ss_pred HHHHHH
Confidence 655543
No 103
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.72 E-value=1.7e-16 Score=172.18 Aligned_cols=183 Identities=16% Similarity=0.140 Sum_probs=120.7
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeCce
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaenG~ 670 (937)
|||+|+||||++.. ..+.+.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999763 2123468999999987 599999999999999999998885 479999999
Q ss_pred EEEecCCeee-e---ccccccChhHHHHHHHHHHHHHhcCCCce-e-ee----------------------ecceEEEEe
Q 002314 671 FLRCTTGKWM-T---TMPEHLNMEWVDSLKHVFEYFTERTPRSH-F-EQ----------------------RETSLVWNY 722 (937)
Q Consensus 671 ~ir~~~~~w~-~---~~~~~~~~~w~~~v~~il~~~~~~~~Gs~-i-E~----------------------K~~sl~~hy 722 (937)
++...++... . ......+ .+.+.++++.+....+..+ + .. ......+.+
T Consensus 66 ~i~~~~~~~~~~~~~~~~~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPVIALGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW 142 (256)
T ss_pred EEEeCCCcccCCCeEEEEcCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec
Confidence 9986432210 0 1101122 2455555554432211100 0 00 000000000
Q ss_pred eccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCC--CceEEEEecCC
Q 002314 723 KYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGHFL 800 (937)
Q Consensus 723 r~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~--~d~vl~iGD~d 800 (937)
+++ ....+...+ . ...+.+..+..++||.|++++||.||++|+++++ ++ .+++++||| +
T Consensus 143 ---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD-~ 203 (256)
T TIGR01486 143 ---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD-S 203 (256)
T ss_pred ---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC-C
Confidence 111 112222222 2 1245666666799999999999999999999998 56 899999999 9
Q ss_pred CCcHHHHHhcCc
Q 002314 801 GKDEDVYAFFEP 812 (937)
Q Consensus 801 ~nDEdMf~~~~~ 812 (937)
.||++||+.++.
T Consensus 204 ~ND~~Ml~~ag~ 215 (256)
T TIGR01486 204 PNDLPLLEVVDL 215 (256)
T ss_pred HhhHHHHHHCCE
Confidence 999999999976
No 104
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.69 E-value=3.8e-15 Score=173.19 Aligned_cols=286 Identities=15% Similarity=0.132 Sum_probs=175.9
Q ss_pred HHHHHhCCCCCEEEEeCcccchHHHHHHh-hCCCCeEEEEEccCCC-chhhhccCccchHHHHhhh-cCCEEEEeCHHHH
Q 002314 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 299 (937)
Q Consensus 223 ~~i~~~~~~~DvVwvHDyhl~llp~~Lr~-~~~~~~I~~flH~PfP-s~e~fr~lp~r~eil~~ll-~aDlIgF~t~~~~ 299 (937)
.++++..+| |+|++|.+.++ |.++.. +..++|+.+..|.... +...++.+ ..+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHH
Confidence 344555565 89998877765 444432 2346777766554322 11222211 22333333 4799999998887
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCH
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 378 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi 378 (937)
+.|.+ +|.. .. +.++|++ +.+.+... ........+++.+ .++++|+++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77654 2321 22 5566663 33322211 1112344566667 678889999875 6889
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhccc---CC--C--CcccEEEeCCCCCHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF---GT--L--TAVPIHHLDRSLDFP 451 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~---g~--~--~~~pV~~~~~~v~~~ 451 (937)
..+|+||.++.+++|+++ |+++| ++++. .+++++++.+.+-.+ .. . .-..|. +.+ +..
T Consensus 247 ~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~--~~~ 311 (425)
T PRK05749 247 ELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVL-LGD--TMG 311 (425)
T ss_pred HHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEE-EEe--cHH
Confidence 999999999988888764 66664 34432 123444444432211 00 0 001222 222 357
Q ss_pred HHHHHHHHccEEEE-CCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccc----ccCCceEEECCCCHHHHHHHHHHHHc
Q 002314 452 ALCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ----SLGAGAILVNPWNITEVANAIARALN 526 (937)
Q Consensus 452 el~aly~~ADv~vv-~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~----~lg~~gllVnP~D~~~lA~aI~~aL~ 526 (937)
++..+|+.||++++ +|+.||+|++++|||||+ .|+|++...|... .+..+|.++.|.|++++|++|.++++
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhc
Confidence 99999999999666 688899999999999994 6888776544332 22356888889999999999999998
Q ss_pred CCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHH
Q 002314 527 MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 527 m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~ 560 (937)
++ +.+.++.+++++++.++. .-++++++.+.
T Consensus 388 ~~-~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 388 DP-DARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred CH-HHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 54 567778888888886652 33344444443
No 105
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.68 E-value=1.3e-15 Score=167.03 Aligned_cols=185 Identities=13% Similarity=0.112 Sum_probs=122.5
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEee
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liae 667 (937)
..|+||+|+||||++.. ..+++.++++|++|.+ .|+.++|+|||+...+...+..++ .++|+.
T Consensus 3 ~~kli~~DlDGTLl~~~--------------~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~ 67 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHH--------------TYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVE 67 (273)
T ss_pred cceEEEEcCcccCcCCC--------------CcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEE
Confidence 36899999999999752 3467789999999986 699999999999999999988875 379999
Q ss_pred CceEEEecCC--------------eeeeccccccChhHHHHHHHHHHHHHhcCCCce-eeee------------------
Q 002314 668 NGMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH-FEQR------------------ 714 (937)
Q Consensus 668 nG~~ir~~~~--------------~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~-iE~K------------------ 714 (937)
||+.+...++ .|... ...+ .+.+.++++.+.......+ +...
T Consensus 68 nGa~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (273)
T PRK00192 68 NGAAIYIPKNYFPFQPDGERLKGDYWVIE--LGPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESAR 142 (273)
T ss_pred cCcEEEecccccccCCccccccCCceEEE--cCCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHH
Confidence 9999975322 22111 1122 2344444443322111000 0000
Q ss_pred -----cceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCC
Q 002314 715 -----ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (937)
Q Consensus 715 -----~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~ 789 (937)
.....+-+. .++ .....+...+ . ..++.+..++.++||.|.+ +||.|+++++++++ ++
T Consensus 143 ~~~~~~~~~~~~~~-~~~----~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~ 205 (273)
T PRK00192 143 LAKDREFSEPFLWN-GSE----AAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQ 205 (273)
T ss_pred HHHhcccCCceeec-Cch----HHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------cc
Confidence 000000000 000 0112222223 1 2246666777899999999 99999999999998 67
Q ss_pred C-ceEEEEecCCCCcHHHHHhcCc
Q 002314 790 I-DYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 790 ~-d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+ +++++||| +.||++||+.++.
T Consensus 206 ~~~~v~~~GD-s~NDi~m~~~ag~ 228 (273)
T PRK00192 206 DGVETIALGD-SPNDLPMLEAADI 228 (273)
T ss_pred CCceEEEEcC-ChhhHHHHHhCCe
Confidence 8 99999999 9999999999976
No 106
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.66 E-value=1.1e-15 Score=154.63 Aligned_cols=156 Identities=28% Similarity=0.366 Sum_probs=119.1
Q ss_pred cCCcEEEEEecccccCCHHHHHHHHHHhHHh-CcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcc
Q 002314 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (937)
Q Consensus 361 ~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~-~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 439 (937)
.++++|+++||+++.||+..+++|+..+.++ .++ +.|+++| +++. ...+..++...+. . .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G-----~~~~----~~~~~~~~~~~~~----~--~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVG-----DGEY----KKELKNLIEKLNL----K--E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEES-----HCCH----HHHHHHHHHHTTC----G--T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEc-----cccc----ccccccccccccc----c--c
Confidence 4788999999999999999999999999875 555 4477675 1121 2233444443332 1 2
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHH
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~l 517 (937)
.|++ .+.++.+++..+|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 4665 567779999999999999999999999999999999994 799999977777777 567899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 518 ANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 518 A~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
+++|.++++++ +.+..+.++.++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 455555555443
No 107
>PLN02382 probable sucrose-phosphatase
Probab=99.66 E-value=8.9e-16 Score=176.91 Aligned_cols=196 Identities=16% Similarity=0.219 Sum_probs=125.0
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHH-HHhhcCCCCeEEEEcCCChhhHHHHhccc----
Q 002314 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY---- 660 (937)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L-~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---- 660 (937)
+..+.+.+|++|+||||++..+ +..++.....+| +++.+ .+..++++|||+...+.++...+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~ 70 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLT 70 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCC
Confidence 3456788999999999997631 234565555555 77775 69999999999987777765554
Q ss_pred CceEEeeCceEEEecC-----CeeeeccccccChhHHH-HHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHH
Q 002314 661 NLWLAAENGMFLRCTT-----GKWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQA 734 (937)
Q Consensus 661 ~l~liaenG~~ir~~~-----~~w~~~~~~~~~~~w~~-~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a 734 (937)
+..+|+.||++|...+ ..|...+ +..|.. .+.+.+..+....+....+.+...+.+++...+ .....
T Consensus 71 p~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~---~~~~~ 143 (413)
T PLN02382 71 PDITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKK---AQEVI 143 (413)
T ss_pred CCEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHH---hHHHH
Confidence 3458888999997532 1232221 223322 122222222111112233445556666654221 11112
Q ss_pred HHHHHHHhcCCCCCCCeEE-EEcCeEEEEEECCCCHHHHHHHHHHHh---cccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 735 RDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 735 ~el~~~L~~~~~~~~~v~v-~~Gk~~vEV~p~gvnKG~Av~~Ll~~l---~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
.++.+.+ .. ....+.+ ..++.++||.|+++|||.||+.|++++ + ++++.+++||| +.||++||+.+
T Consensus 144 ~~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g------i~~~~~iafGD-s~NDleMl~~a 213 (413)
T PLN02382 144 KELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG------KAPVNTLVCGD-SGNDAELFSVP 213 (413)
T ss_pred HHHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC------CChhcEEEEeC-CHHHHHHHhcC
Confidence 3333333 21 1123444 467889999999999999999999998 5 57899999999 99999999988
Q ss_pred C
Q 002314 811 E 811 (937)
Q Consensus 811 ~ 811 (937)
+
T Consensus 214 g 214 (413)
T PLN02382 214 D 214 (413)
T ss_pred C
Confidence 6
No 108
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.65 E-value=3.4e-15 Score=160.91 Aligned_cols=188 Identities=16% Similarity=0.200 Sum_probs=124.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEeeC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~liaen 668 (937)
+|+||+|+||||++.. ..+.+.++++|++|.+ .|+.|+++|||+...+..++..++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~~--------------~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDLE--------------FNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCCC--------------CcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 4799999999999862 3467789999999987 599999999999999999988884 4899999
Q ss_pred ceEEEecCCeeeec-c-cc---ccChhH-------HHHHHHHHHHHHhcCC------------------Cceee------
Q 002314 669 GMFLRCTTGKWMTT-M-PE---HLNMEW-------VDSLKHVFEYFTERTP------------------RSHFE------ 712 (937)
Q Consensus 669 G~~ir~~~~~w~~~-~-~~---~~~~~w-------~~~v~~il~~~~~~~~------------------Gs~iE------ 712 (937)
|+.|..+.. |... . +. ..+..| ...++.+++....... |.-.+
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985432 3210 0 00 001111 2233344433322211 11111
Q ss_pred eecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEE------------------C---CCCHHH
Q 002314 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 771 (937)
Q Consensus 713 ~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p------------------~---gvnKG~ 771 (937)
.+++|-.+++...+.. +.+.+ ...++.++.|..++.+.. . +++||.
T Consensus 145 ~Re~SEp~~w~~~~~~--------~~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPAR--------LREAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHH--------HHHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 1234444444432211 12222 223678888887777775 5 899999
Q ss_pred HHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 772 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|+++|.+.+... . .+ =.+|++|| +.||.+|++++..
T Consensus 212 A~~~L~~~y~~~--~-~~-~~tiaLGD-spND~~mLe~~D~ 247 (302)
T PRK12702 212 AVQLLLDCYQRH--L-GP-IKALGIGC-SPPDLAFLRWSEQ 247 (302)
T ss_pred HHHHHHHHHHhc--c-CC-ceEEEecC-ChhhHHHHHhCCe
Confidence 999999988621 0 11 26899999 9999999999976
No 109
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.65 E-value=2.4e-15 Score=177.72 Aligned_cols=188 Identities=15% Similarity=0.135 Sum_probs=123.3
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC--ceEEe
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~--l~lia 666 (937)
.++|+||+|+||||++.. ..+++.++++|++|.+ .|+.|+++|||+...+..++..++ .++|+
T Consensus 414 ~~~KLIfsDLDGTLLd~d--------------~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~ 478 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPL--------------TYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFIT 478 (694)
T ss_pred ceeeEEEEECcCCCcCCC--------------CccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEE
Confidence 357899999999999862 2456789999999987 599999999999999999888874 47999
Q ss_pred eCceEEEecCCeee------------eccccccChhHHHHHHHHHHHHHhcCC----------Cceeeeec---------
Q 002314 667 ENGMFLRCTTGKWM------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRE--------- 715 (937)
Q Consensus 667 enG~~ir~~~~~w~------------~~~~~~~~~~w~~~v~~il~~~~~~~~----------Gs~iE~K~--------- 715 (937)
+||+.+...++... .+.....+. +.+.++++...+... +.++..+.
T Consensus 479 eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~---e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~ 555 (694)
T PRK14502 479 ENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAY---KDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSR 555 (694)
T ss_pred cCCCEEEECCCcccccccccccCCCeEEEEcCCCH---HHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHH
Confidence 99999986433100 011011222 233444443322110 11111100
Q ss_pred ----------------ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHH
Q 002314 716 ----------------TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAE 779 (937)
Q Consensus 716 ----------------~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~ 779 (937)
.+..+.+. .++ ....++.+.+ . ...+++..|..++||. .++|||.||++|++.
T Consensus 556 ~TgL~~~~a~~a~~Re~seKIl~~-gd~----e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~ 624 (694)
T PRK14502 556 LTDLNLKQAELAKQREYSETVHIE-GDK----RSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNEL 624 (694)
T ss_pred hhCCCHHHHHHHhhccCceeEEEc-CCH----HHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHHH
Confidence 00000000 001 1123333334 2 2256777799999999 599999999999999
Q ss_pred hcccccCCCCCceEEEE--ecCCCCcHHHHHhcCc
Q 002314 780 IVHSKKMKTAIDYVLCI--GHFLGKDEDVYAFFEP 812 (937)
Q Consensus 780 l~~~~~~~~~~d~vl~i--GD~d~nDEdMf~~~~~ 812 (937)
++ ++.+.+++| || +.||.+||++++.
T Consensus 625 ~g------I~~~eViafalGD-s~NDisMLe~Ag~ 652 (694)
T PRK14502 625 FR------LNFGNIHTFGLGD-SENDYSMLETVDS 652 (694)
T ss_pred hC------CCccceEEEEcCC-cHhhHHHHHhCCc
Confidence 98 456778888 99 9999999999986
No 110
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.61 E-value=4.7e-15 Score=157.85 Aligned_cols=186 Identities=16% Similarity=0.158 Sum_probs=116.3
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc--eEEeeCce
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 670 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaenG~ 670 (937)
+||+|+||||++.. .++++++++|++|.+ .|+.|+++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---------------YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCCC---------------CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 58999999999842 134579999999987 5999999999999999998888754 79999999
Q ss_pred EEEecCC-------------eeeeccccccChhHHHHHHHHHHHHHhcCCCceeee---ecceEEEEeeccChhhh----
Q 002314 671 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ---RETSLVWNYKYADVEFG---- 730 (937)
Q Consensus 671 ~ir~~~~-------------~w~~~~~~~~~~~w~~~v~~il~~~~~~~~Gs~iE~---K~~sl~~hyr~ad~e~~---- 730 (937)
.+..... ... ......+. +.++++++...+..+-.++.. .... .+....+...
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~~-i~~~~l~~---~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 137 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNYE-VIELGKPV---AKIRAALKEAENEYGLKYYGNSTAEEVE---KLTGLPRELAPLAK 137 (225)
T ss_pred EEEecCccccccccccccCCCeE-EEEcCCCH---HHHHHHHHHHHHhcCccchhcCCHHHHH---HHHCcCHHHHHHHH
Confidence 9986321 110 11111222 233444433322111110000 0000 0000000000
Q ss_pred ------------HHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 731 ------------RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 731 ------------~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
.....++.+.+ . ...+.+.++..++++. .++|||.|++.+++.++.. .+...+++|||
T Consensus 138 ~~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD 207 (225)
T TIGR02461 138 RREYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD 207 (225)
T ss_pred hhhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC
Confidence 00112233333 1 2356778887778875 4999999999999998631 24568999999
Q ss_pred CCCCcHHHHHhcCc
Q 002314 799 FLGKDEDVYAFFEP 812 (937)
Q Consensus 799 ~d~nDEdMf~~~~~ 812 (937)
+.||++||++++.
T Consensus 208 -~~nD~~ml~~ag~ 220 (225)
T TIGR02461 208 -SENDFPMFEVVDL 220 (225)
T ss_pred -CHHHHHHHHhCCC
Confidence 9999999999975
No 111
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.60 E-value=2.9e-15 Score=161.67 Aligned_cols=188 Identities=18% Similarity=0.291 Sum_probs=118.5
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc----CceEEe
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLAA 666 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~----~l~lia 666 (937)
++||++|+||||++. +..-..++.+.++ ....++..++++|||++..+.+.+... +.++|+
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~ 66 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIIT 66 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEE
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEe
Confidence 589999999999921 1112355666666 334578999999999999999888865 457999
Q ss_pred eCceEEEecC-----CeeeeccccccChhHH-HHHHHHHHHHHhcCCCceeeeecceEEEEeeccChhhhHHHHHHHHHH
Q 002314 667 ENGMFLRCTT-----GKWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (937)
Q Consensus 667 enG~~ir~~~-----~~w~~~~~~~~~~~w~-~~v~~il~~~~~~~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~ 740 (937)
++|++|.... ..|...+ ...|. +.+.+++..+..-.+..-.+..++.+++.++..+.. ....++.+.
T Consensus 67 svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~~ 139 (247)
T PF05116_consen 67 SVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRAR 139 (247)
T ss_dssp TTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHHH
T ss_pred cCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch---hHHHHHHHH
Confidence 9999998622 1233222 22343 334444443322111111223345666666544322 123445555
Q ss_pred HhcCCCCCCCeEEE-EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 741 LWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 741 L~~~~~~~~~v~v~-~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
+ .. ....+.++ ++...++|.|.+++||.||++|+++++ ++.+.++++|| +.||.+||...
T Consensus 140 l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~ 200 (247)
T PF05116_consen 140 L-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGG 200 (247)
T ss_dssp H-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCS
T ss_pred H-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCc
Confidence 5 32 22345555 467789999999999999999999998 57899999999 99999999554
No 112
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.54 E-value=8.2e-13 Score=151.19 Aligned_cols=264 Identities=17% Similarity=0.141 Sum_probs=163.6
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc-hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r-~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
++.++|.+..-...+... .+..+++|-+|--|+.... .-+.. ......+-.||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~--~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPG--GPPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCC--CCHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 556888876555444444 4566777766544432111 00111 11223344689988777765443221
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHHHHHHHHHHhH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll 389 (937)
.+ .++.++|+|+|.+.|.+....+.. ...+ ...++++|+|+|++.+.+++. +|.++ .
T Consensus 171 ------------~~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 ------------LN--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred ------------CC--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 11 467889999999999754321110 0111 114678999999999966654 44443 3
Q ss_pred HhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC-
Q 002314 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (937)
Q Consensus 390 ~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (937)
+.+|+++ |+++|... ...+ . .++ .. ...|++ .|.++.+++.++|+.||++++|+.
T Consensus 228 ~~~p~~~----~vliG~~~--~~~~---~----~~~----~~------~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDWS----FVLIGPVD--VSID---P----SAL----LR------LPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCCE----EEEECCCc--CccC---h----hHh----cc------CCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 4578764 77776420 0011 0 111 00 124665 789999999999999999999986
Q ss_pred ----CcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhh
Q 002314 469 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 469 ----~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~ 544 (937)
.+++++.++|||||+ .|+|.|....+.+. +. +..+.+.|+++++++|.++|..+..++.++. ...++
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~-~~-~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRY-ED-EVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhh-cC-cEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 357899999999994 67777765444332 23 3444466999999999998765543433322 22688
Q ss_pred cCCHHHHHHHHHHHHHH
Q 002314 545 THTAQEWAETFVSELND 561 (937)
Q Consensus 545 ~~~~~~W~~~fl~~l~~ 561 (937)
+|||+.=++.++..|.+
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 99999999988876654
No 113
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.52 E-value=2.9e-13 Score=146.44 Aligned_cols=168 Identities=17% Similarity=0.202 Sum_probs=130.0
Q ss_pred eeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEE
Q 002314 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (937)
Q Consensus 324 r~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv 402 (937)
...+|.++||-|+++.|.|.... +. .+...|+.++||.|+||++.+++++.++.+++|+.+ ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 45689999999999999874321 12 345789999999999999999999999999999976 77
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHh
Q 002314 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (937)
Q Consensus 403 qi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc 482 (937)
++| |||..-.|++.+++.- . ..+|.+ .|.++.+++...|...|||+.||+.|.|+++++||+.|
T Consensus 231 i~G-----DGPk~i~lee~lEk~~--------l--~~rV~~-lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKLF--------L--QDRVVM-LGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHhh--------c--cCceEE-ecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 664 6665444444444331 1 136774 79999999999999999999999999999999999999
Q ss_pred cCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcC
Q 002314 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 527 (937)
Q Consensus 483 ~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m 527 (937)
+ -++|.+..+|..+.|.++-+...+-.++++++++.++++.
T Consensus 295 G----L~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 295 G----LPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred C----CEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 3 4555566666666774343445566788999999888863
No 114
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.50 E-value=4.7e-12 Score=145.48 Aligned_cols=217 Identities=10% Similarity=0.051 Sum_probs=139.7
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCC
Q 002314 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (937)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (937)
.+|.+..-+....+.+.. .|. ...+|.+++++||.+.+.+. . ....+++++ .++
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g~-----------~~~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~ 206 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RGL-----------EPSQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDL 206 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cCC-----------CHHHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCC
Confidence 578887766544333221 121 23567788899987543321 1 123456666 367
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHHh----CcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcc
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~~----~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 439 (937)
++|+++||....||+..+++++..++.. .|+. .++.+++ +++ .++++++++.. + .
T Consensus 207 ~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~----~~~vi~G----~~~---~~~~~L~~~~~--~--------~ 265 (382)
T PLN02605 207 PAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIG----QVVVICG----RNK---KLQSKLESRDW--K--------I 265 (382)
T ss_pred cEEEEECCCcccccHHHHHHHHHHhhccccccCCCc----eEEEEEC----CCH---HHHHHHHhhcc--c--------C
Confidence 8999999999999999999999876521 2333 2333432 222 22333433210 1 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC-----CCcccccCCceEEECCCCH
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNI 514 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~-----aG~~~~lg~~gllVnP~D~ 514 (937)
.|+ +.|+++ ++..+|++||++|.+| .+++++|||||+ .|+|++.. .|.++.+-.+|.-+.+.|+
T Consensus 266 ~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~ 334 (382)
T PLN02605 266 PVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESP 334 (382)
T ss_pred CeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCH
Confidence 355 357764 7999999999999866 378999999994 78898875 2333434123333345899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHH
Q 002314 515 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 558 (937)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~ 558 (937)
++++++|.++|.+.++.++++.++++++...+.+..-++.+++.
T Consensus 335 ~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 335 KEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 99999999999974566777777778888777776666655443
No 115
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.41 E-value=1.2e-11 Score=141.97 Aligned_cols=251 Identities=15% Similarity=0.122 Sum_probs=171.6
Q ss_pred HhhhcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--
Q 002314 283 RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-- 360 (937)
Q Consensus 283 ~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-- 360 (937)
+....+|.+.-.++...+.|..... .++. ..+.+...+||.+.+........ .+.....|...
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~---~L~~-----------~d~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v 269 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFV---SLSN-----------SDITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGV 269 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhh---hcCC-----------CCcceeeccccchhccccccccc-hhcccccceeeee
Confidence 3455678886666655555544222 2221 11556667788776653211100 00001111111
Q ss_pred -cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCcc-CcEEEEEEEcC-CCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 361 -AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 361 -~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~-~~v~Lvqi~~p-~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
..+.+++.+-|+.+-||+...|.||.++...-|+.. ....++..+.+ +.+...+..++..++.+++++.+- +|
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g--- 345 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG--- 345 (495)
T ss_pred cccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC---
Confidence 236788899999999999999999999988775411 12445545422 333344555666778888876532 12
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHH
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 515 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~ 515 (937)
.++++....++.+.+.++..+.+.+.++-.|-||+|++|||||+ .|+|++..+|.++.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG----LPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC----CCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 34556677888888888888899999998899999999999994 799999999999998 889999999 676
Q ss_pred ---HHHHHHHHHHcCCHHHHHHHHHhhhhhhhc-CCHHHHHHHHHHHHH
Q 002314 516 ---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELN 560 (937)
Q Consensus 516 ---~lA~aI~~aL~m~~~er~~r~~~~~~~V~~-~~~~~W~~~fl~~l~ 560 (937)
.+|++|.++..++. .+.++.+++++.|++ |+|+.-.+++.+-+.
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 59999999999875 578888899999977 887555555554444
No 116
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.37 E-value=2.5e-10 Score=124.03 Aligned_cols=198 Identities=24% Similarity=0.334 Sum_probs=143.0
Q ss_pred EEEEEecccChhhhhhh-hcCCchHHHHHHHHHHhcC--CcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEE
Q 002314 327 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (937)
Q Consensus 327 ~i~v~P~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq 403 (937)
++.++|+|++.+.+... .. ...+ ..+++++||+.+.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 67788999999987642 00 0112 36899999999999999999999999887665 44666
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 404 i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
+|..... ...+.+++.+.+.. ..|.+ .+.++.+++..+|+.||++++||..||||++++|||+|+
T Consensus 236 ~g~~~~~--------~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER--------REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc--------HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6543211 11222233333221 13554 788888899999999999999999999999999999994
Q ss_pred CCCCceEEEeCCCCcccccCCc--eEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHH
Q 002314 484 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~--gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~ 560 (937)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..-+..++..+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 688889888888887433 78888888999999999999887 34444444344444 57777777766555554
Q ss_pred H
Q 002314 561 D 561 (937)
Q Consensus 561 ~ 561 (937)
.
T Consensus 376 ~ 376 (381)
T COG0438 376 E 376 (381)
T ss_pred H
Confidence 4
No 117
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.36 E-value=2.5e-10 Score=130.85 Aligned_cols=270 Identities=12% Similarity=0.068 Sum_probs=161.3
Q ss_pred HHHHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHH
Q 002314 222 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARH 301 (937)
Q Consensus 222 A~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~ 301 (937)
..++++..+| |+|++| +....++.+.+....++|+...++ -|-. + ...+. -.+|.+...+....+.
T Consensus 96 l~~~l~~~~p-D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~t-d~~~-------~-~~~~~---~~ad~i~~~s~~~~~~ 161 (380)
T PRK13609 96 LKLLLQAEKP-DIVINT-FPIIAVPELKKQTGISIPTYNVLT-DFCL-------H-KIWVH---REVDRYFVATDHVKKV 161 (380)
T ss_pred HHHHHHHhCc-CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeC-CCCC-------C-ccccc---CCCCEEEECCHHHHHH
Confidence 3444455555 899985 555567766666556677653332 1110 0 01111 1579888777655444
Q ss_pred HHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---CCc-EEEEEecccccCC
Q 002314 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKG 377 (937)
Q Consensus 302 Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-iIL~VdRld~~KG 377 (937)
+.+ .|. ...++.++++.++. .|.... + ...++++++ +++ ++++.|++...||
T Consensus 162 l~~-----~gi-----------~~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~ 217 (380)
T PRK13609 162 LVD-----IGV-----------PPEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGN 217 (380)
T ss_pred HHH-----cCC-----------ChhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcC
Confidence 332 121 12345554444432 343211 1 123455552 445 4556789999999
Q ss_pred HHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 002314 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (937)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (937)
+..+++++.. .|++ .++++++. +.+ +++++++++.+.+ ..|++ .|++ +++..+|
T Consensus 218 ~~~li~~l~~----~~~~----~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~--~~~~~l~ 271 (380)
T PRK13609 218 VKELCQSLMS----VPDL----QVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYV--ENIDELF 271 (380)
T ss_pred HHHHHHHHhh----CCCc----EEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eech--hhHHHHH
Confidence 9999888753 3544 36656532 122 3345555543322 14665 4666 4688999
Q ss_pred HHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeC-CCCcc----cccCCceEEECCCCHHHHHHHHHHHHcCCHHHH
Q 002314 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAA----QSLGAGAILVNPWNITEVANAIARALNMSPEER 532 (937)
Q Consensus 458 ~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe-~aG~~----~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er 532 (937)
+.||+++. ++.|++++|||||+ .|+|++. ..|.- ..+...|..+.+.|.++++++|.++++++ +.+
T Consensus 272 ~~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~ 342 (380)
T PRK13609 272 RVTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKL 342 (380)
T ss_pred HhccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHH
Confidence 99999874 45589999999994 6788775 34421 12223455556789999999999999865 456
Q ss_pred HHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHH
Q 002314 533 EKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (937)
Q Consensus 533 ~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~ 564 (937)
.++.++.+++...+++...++.+++.+....+
T Consensus 343 ~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 343 LQMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 66666667777788999999988877655443
No 118
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.30 E-value=3e-10 Score=128.05 Aligned_cols=248 Identities=17% Similarity=0.142 Sum_probs=151.2
Q ss_pred HHHHhCCCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHH
Q 002314 224 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFV 303 (937)
Q Consensus 224 ~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl 303 (937)
++++..+ +|+|+.|.....+ +..+..+..++|+.++.|..||. .. +.++ ...+|.|...++...+.
T Consensus 83 ~~i~~~~-pDvI~~~~~~~~~-~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~-- 148 (350)
T cd03785 83 KILKKFK-PDVVVGFGGYVSG-PVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY-- 148 (350)
T ss_pred HHHHhcC-CCEEEECCCCcch-HHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc--
Confidence 3344444 5999998765433 33333344467777655554542 10 1111 11367777665532221
Q ss_pred HHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecccccCCHHH
Q 002314 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (937)
Q Consensus 304 ~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRld~~KGi~~ 380 (937)
-...++.++|+|+|.+.|.+.. . ++++ .++++|+.+++....|+...
T Consensus 149 -------------------~~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~ 198 (350)
T cd03785 149 -------------------FPKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINE 198 (350)
T ss_pred -------------------CCCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHH
Confidence 0135778899999988775321 1 2333 35778888888877888776
Q ss_pred HH-HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 381 KL-LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 381 ~l-~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
++ +|++.+.+ ++ +.++.++++ + +.+++++ ++.+. + ..|++ .+.+ +++..+|+.
T Consensus 199 ~l~~a~~~l~~--~~----~~~~~i~G~----g-~~~~l~~----~~~~~----~----~~v~~-~g~~--~~~~~~l~~ 252 (350)
T cd03785 199 AVPEALAELLR--KR----LQVIHQTGK----G-DLEEVKK----AYEEL----G----VNYEV-FPFI--DDMAAAYAA 252 (350)
T ss_pred HHHHHHHHhhc--cC----eEEEEEcCC----c-cHHHHHH----HHhcc----C----CCeEE-eehh--hhHHHHHHh
Confidence 55 77776642 22 333333322 2 2233333 33221 1 13554 5554 789999999
Q ss_pred ccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC--------ccccc--CCceEEECCC--CHHHHHHHHHHHHcC
Q 002314 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNM 527 (937)
Q Consensus 460 ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG--------~~~~l--g~~gllVnP~--D~~~lA~aI~~aL~m 527 (937)
||++|.+| | +.+++|||+|+ .|+|++...+ .++.+ +..|++|++. |.++++++|.++++.
T Consensus 253 ad~~v~~s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 253 ADLVISRA---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD 324 (350)
T ss_pred cCEEEECC---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC
Confidence 99999877 3 57899999994 6777765443 13344 3568999987 999999999999974
Q ss_pred CHHHHHHHHHhhhhhhhcCCHHH
Q 002314 528 SPEEREKRHWHNFTHVTTHTAQE 550 (937)
Q Consensus 528 ~~~er~~r~~~~~~~V~~~~~~~ 550 (937)
++.++++..++++++..+...+
T Consensus 325 -~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 325 -PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred -HHHHHHHHHHHHhcCCCCHHHH
Confidence 4566667777777777665544
No 119
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.30 E-value=8e-11 Score=122.26 Aligned_cols=118 Identities=29% Similarity=0.362 Sum_probs=85.3
Q ss_pred EEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC
Q 002314 368 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (937)
Q Consensus 368 ~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~ 447 (937)
++||+.+.||+..+++|+..+.+++|++ .|+++|... + ..+ .. ++... .+. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~~--~-~~~--~~----~~~~~----~~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDGP--E-REY--LE----ELLAA----LLL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCCC--C-hHH--HH----HHHHh----cCC--cccEEE-eCC
Confidence 9999999999999999999998888765 477776432 1 111 11 11111 111 134665 455
Q ss_pred C-CHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEE
Q 002314 448 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (937)
Q Consensus 448 v-~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllV 509 (937)
+ +.+++..+++.||+++.||..||++++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666777777999999999999999999999994 799999998888766 4556654
No 120
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.27 E-value=4.3e-10 Score=127.61 Aligned_cols=252 Identities=16% Similarity=0.078 Sum_probs=158.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
.+|+|+.|+....+.+.++ .+..+.|+.++.|..+|.. .+.++- ..+|.+...++.- +.
T Consensus 91 ~pDvv~~~~~~~~~~~~~~-~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~~------- 149 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGGLA-ARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---FP------- 149 (357)
T ss_pred CCCEEEECCCcchhHHHHH-HHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---hh-------
Confidence 3699999985544444433 3455788887766544420 011111 1345554443311 00
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCHHHHH-HHHHHh
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 388 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi~~~l-~Af~~l 388 (937)
+....++.++|+|||.+.+.+. .. ...+ .. .+.++|+++++....|++..++ +|+.++
T Consensus 150 -----------~~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 150 -----------EFFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred -----------ccCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 0123678999999998766431 10 0111 11 3677889999999999987776 888877
Q ss_pred HHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCC
Q 002314 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (937)
Q Consensus 389 l~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (937)
... | ..++++|. ++ .+++.+. .. . +. .|. +.+++ +++..+|..||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~-----g~-~~~~~~~----~~-~----~~----~v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGK-----GD-LEEVRAA----YA-A----GI----NAE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCC-----Cc-HHHHHHH----hh-c----CC----cEE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 23555542 22 1222222 11 1 11 144 35665 68999999999999877
Q ss_pred CcCCChhHHHHHHhcCCCCceEEEeCCCCc--------cccc--CCceEEECCCC--HHHHHHHHHHHHcCCHHHHHHHH
Q 002314 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 536 (937)
Q Consensus 469 ~EG~nLv~~EamAc~~~~~g~lVlSe~aG~--------~~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~ 536 (937)
| +.+++|||+|+ .|+|++-..|. ++.+ +..|++++|.| +++++++|.+++++ ++.++.+.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999994 67777644321 2334 35688999888 99999999999997 45667777
Q ss_pred HhhhhhhhcCCHHHHHHHHHHHHH
Q 002314 537 WHNFTHVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 537 ~~~~~~V~~~~~~~W~~~fl~~l~ 560 (937)
++++++.+.++...-++.+++.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 778888888888888887776543
No 121
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.24 E-value=1.2e-09 Score=124.54 Aligned_cols=251 Identities=14% Similarity=0.096 Sum_probs=144.3
Q ss_pred CCEEEEeCcccchH-HHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHHHHHHH
Q 002314 232 GDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 232 ~DvVwvHDyhl~ll-p~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
+|+|++|......+ ...+.. ..++|+++..+-. -+.+.+. |+.+++.+-+. .+|++.-.+....+++++
T Consensus 87 pDiv~~~gd~~~~la~a~aa~-~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~---- 158 (365)
T TIGR00236 87 PDIVLVQGDTTTTLAGALAAF-YLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR---- 158 (365)
T ss_pred CCEEEEeCCchHHHHHHHHHH-HhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH----
Confidence 49999995444434 444433 4478887543321 1111111 12223322221 256666666666555543
Q ss_pred HhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc-CCcEEEEE-ecc-cccCCHHHHHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGV-DRL-DMIKGIPQKLLAF 385 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIL~V-dRl-d~~KGi~~~l~Af 385 (937)
+|. ...+|.++++|+....+...... ....++++++ ++.+++.. .|. ...||+..+++|+
T Consensus 159 -~G~-----------~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~ 221 (365)
T TIGR00236 159 -ENV-----------KADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAI 221 (365)
T ss_pred -cCC-----------CcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHH
Confidence 121 24578899999633322221110 1123445553 33455554 465 3459999999999
Q ss_pred HHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEE
Q 002314 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (937)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (937)
.++.+++|+++ +++++.|. ++ .+.++ ...++ .. ..|++ .+.+...++..+|+.||+++.
T Consensus 222 ~~l~~~~~~~~----~vi~~~~~----~~---~~~~~---~~~~~----~~--~~v~~-~~~~~~~~~~~~l~~ad~vv~ 280 (365)
T TIGR00236 222 REIVEEFEDVQ----IVYPVHLN----PV---VREPL---HKHLG----DS--KRVHL-IEPLEYLDFLNLAANSHLILT 280 (365)
T ss_pred HHHHHHCCCCE----EEEECCCC----hH---HHHHH---HHHhC----CC--CCEEE-ECCCChHHHHHHHHhCCEEEE
Confidence 99988888754 55444332 11 12222 22221 11 24654 578899999999999999999
Q ss_pred CCCCcCCChhHHHHHHhcCCCCceEEEe-CCCCccccc-CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 466 TSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 466 ~Sl~EG~nLv~~EamAc~~~~~g~lVlS-e~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
+| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...+++| |.|+++++++|.++|+.+ +.++++....
T Consensus 281 ~S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~-~~~~~~~~~~ 345 (365)
T TIGR00236 281 DS-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP-DEYKKMSNAS 345 (365)
T ss_pred CC-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh-HHHHHhhhcC
Confidence 88 45679999994 677775 444443443 2345666 579999999999999855 3344433333
No 122
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.21 E-value=1e-08 Score=123.39 Aligned_cols=182 Identities=14% Similarity=0.121 Sum_probs=127.1
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHhHH--hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcc
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~ll~--~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~ 439 (937)
+..+|.+|.|+...||.+.++.+++++++ .+|+. .+.||+.|.+...+... +++.+.+.++..+ -.|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~--~~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKR--PEFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhc--ccCC----C
Confidence 45588899999999999999999999985 55542 47788787654433221 3455555555543 0021 1
Q ss_pred cEEEeCCCCCHHHHHHHHHHccEEEE-CCC-CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECC----
Q 002314 440 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 511 (937)
Q Consensus 440 pV~~~~~~v~~~el~aly~~ADv~vv-~Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP---- 511 (937)
.|.|+. ..+.+--..+|..||+++. ||. +|..|+.-+=||.- |.|.+|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 466654 4465666688999999999 888 99999999999885 788888888877665 568999985
Q ss_pred --------CCHHHHHHHHHHHH-c----CC----HHHHHHHHHhhhh-hhhcCCHHHHHHHHHHH
Q 002314 512 --------WNITEVANAIARAL-N----MS----PEEREKRHWHNFT-HVTTHTAQEWAETFVSE 558 (937)
Q Consensus 512 --------~D~~~lA~aI~~aL-~----m~----~~er~~r~~~~~~-~V~~~~~~~W~~~fl~~ 558 (937)
.|.+++-++|.+++ . .+ +.+..++++++.. ....++|.+=++.+++.
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998877 2 21 1123344443332 23468888888877654
No 123
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.20 E-value=8.6e-10 Score=124.24 Aligned_cols=181 Identities=15% Similarity=0.096 Sum_probs=118.5
Q ss_pred EEEecccChhhhhhhhcCCchHHHHHHHHHHh-cCCcEEEEEecccccCCHHHH-HHHHHHhHHhCcCccCcEEEEEEEc
Q 002314 329 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQK-LLAFEKFLEENSDWRGKVVLLQIAV 406 (937)
Q Consensus 329 ~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~iIL~VdRld~~KGi~~~-l~Af~~ll~~~P~~~~~v~Lvqi~~ 406 (937)
.++|+|||...+.+. . . ...+ .+ .++++|+++||....|++..+ ++|++.+.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 688999997665421 0 0 0111 12 366789999998888987664 4788776542 22 2333332
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCC
Q 002314 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (937)
Q Consensus 407 p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~ 486 (937)
+++. +++++.+.+.+. ..+..+. ..++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-----~~l~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-----EKVKNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-----HHHHHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 233444433221 1233222 237899999999999875 4 68999999994
Q ss_pred CceEEEeCCCCcc-------ccc--CCceEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHH
Q 002314 487 KGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (937)
Q Consensus 487 ~g~lVlSe~aG~~-------~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~ 553 (937)
.|+|++...|.. +.+ +.+|++++|.| +++++++|.+++++ ++.++++.+++++++..+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 788887765532 334 46799999876 99999999999975 4566777778888888777776654
No 124
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.19 E-value=4.7e-09 Score=121.11 Aligned_cols=262 Identities=11% Similarity=0.052 Sum_probs=153.3
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (937)
.+|+|+++.. ...+..+.+....++|+.. +++-+- ..+ ..+ --.+|.+...+....+.+.. .
T Consensus 104 kPDvVi~~~p-~~~~~~l~~~~~~~iP~~~-v~td~~------~~~--~w~---~~~~d~~~v~s~~~~~~l~~-----~ 165 (391)
T PRK13608 104 KPDLILLTFP-TPVMSVLTEQFNINIPVAT-VMTDYR------LHK--NWI---TPYSTRYYVATKETKQDFID-----V 165 (391)
T ss_pred CcCEEEECCc-HHHHHHHHHhcCCCCCEEE-EeCCCC------ccc--ccc---cCCCCEEEECCHHHHHHHHH-----c
Confidence 4589888632 2233333333344677743 344331 111 001 12478887777654444332 1
Q ss_pred CcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---CCc-EEEEEecccccCCHHHHHHHHH
Q 002314 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKGIPQKLLAFE 386 (937)
Q Consensus 311 g~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-iIL~VdRld~~KGi~~~l~Af~ 386 (937)
|. ...+|.++++.|+. .|.+.. + ...++++++ +++ +++++||+...||+..+++++
T Consensus 166 gi-----------~~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~- 225 (391)
T PRK13608 166 GI-----------DPSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI- 225 (391)
T ss_pred CC-----------CHHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH-
Confidence 21 23456666666664 343211 1 123344442 444 556799999999999999885
Q ss_pred HhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEEC
Q 002314 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (937)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (937)
++..|++ .++++++. .+ ++.+++.+.. +. . ..|++ .|++ +++..+|+.||++|..
T Consensus 226 --~~~~~~~----~~vvv~G~----~~---~l~~~l~~~~---~~----~--~~v~~-~G~~--~~~~~~~~~aDl~I~k 280 (391)
T PRK13608 226 --LAKSANA----QVVMICGK----SK---ELKRSLTAKF---KS----N--ENVLI-LGYT--KHMNEWMASSQLMITK 280 (391)
T ss_pred --HhcCCCc----eEEEEcCC----CH---HHHHHHHHHh---cc----C--CCeEE-Eecc--chHHHHHHhhhEEEeC
Confidence 3344554 35555431 22 1223333222 11 1 13553 5665 5799999999999963
Q ss_pred CCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccc-----cCCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhh
Q 002314 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-----LGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (937)
Q Consensus 467 Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~-----lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~ 541 (937)
+.|+++.|||||+ .|+|++...+..+. +...|.-+-+.|.++++++|.++++++ +++.++.+++++
T Consensus 281 ----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~ 351 (391)
T PRK13608 281 ----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTMEQ 351 (391)
T ss_pred ----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHH
Confidence 4588999999994 68888753322221 112233333569999999999999865 566677778888
Q ss_pred hhhcCCHHHHHHHHHHHHHHhHH
Q 002314 542 HVTTHTAQEWAETFVSELNDTVV 564 (937)
Q Consensus 542 ~V~~~~~~~W~~~fl~~l~~~~~ 564 (937)
....+++...++.+++.+.....
T Consensus 352 ~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 352 DKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred hcCCCCHHHHHHHHHHHhhhhhh
Confidence 88889999888888877665443
No 125
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.16 E-value=3.1e-09 Score=120.52 Aligned_cols=241 Identities=14% Similarity=0.072 Sum_probs=139.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccc--hHHHHhhhcCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR--SDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r--~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
.+|+|++|++....++..+..+..++|+.++.|.-.. .+ +..|+. +..+. -.+|.+..-+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s-~~--~~~~~~~~r~~~~--~~ad~~~~~s~~~~~~l~~---- 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS-FD--RGMPDEENRHAID--KLSDLHFAPTEEARRNLLQ---- 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc-CC--CCCCchHHHHHHH--HHhhhccCCCHHHHHHHHH----
Confidence 4699999987666555555444458888876553110 00 011211 11111 1345554444443333222
Q ss_pred HhCcccCCCceeeCCeeeEEEEEeccc-ChhhhhhhhcCCchHHHHHHHHHHh--c-CCcEEEEEecccc---cCCHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQK 381 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~iIL~VdRld~---~KGi~~~ 381 (937)
.+....+|.++++++ |...+....... ...++.+ . ++.+++.++|+.. .||+..+
T Consensus 159 ------------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l 220 (363)
T cd03786 159 ------------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEI 220 (363)
T ss_pred ------------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHH
Confidence 122346788888885 554433221100 1112222 2 3456678999875 7999999
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|++.+... + +.++..+ +.+... ++++.+.+.+.. . ..|.+ .+....+++..+|+.||
T Consensus 221 ~~al~~l~~~--~----~~vi~~~-----~~~~~~----~l~~~~~~~~~~---~--~~v~~-~~~~~~~~~~~l~~~ad 279 (363)
T cd03786 221 LEALAELAEE--D----VPVVFPN-----HPRTRP----RIREAGLEFLGH---H--PNVLL-ISPLGYLYFLLLLKNAD 279 (363)
T ss_pred HHHHHHHHhc--C----CEEEEEC-----CCChHH----HHHHHHHhhccC---C--CCEEE-ECCcCHHHHHHHHHcCc
Confidence 9999987442 2 3344332 222222 333333333210 0 13554 56667889999999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCC-CHHHHHHHHHHHHcCC
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMS 528 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~-D~~~lA~aI~~aL~m~ 528 (937)
++|.+|- |+ ..|||+|+ .|+|++...+...++..+|+.+.+. |.++++++|.++++++
T Consensus 280 ~~v~~Sg----gi-~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 280 LVLTDSG----GI-QEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDE 338 (363)
T ss_pred EEEEcCc----cH-HhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCc
Confidence 9999994 44 68999994 6888886555454443566555443 7999999999999876
No 126
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.16 E-value=8.1e-09 Score=111.54 Aligned_cols=309 Identities=13% Similarity=0.223 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHHHH---hCC-CCCEEEE--eCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHh
Q 002314 211 FAAYIKANQMFADVVNK---HYK-DGDVVWC--HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~---~~~-~~DvVwv--HDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ 284 (937)
|..+.-.-|+.+..|+. +++ |+| ||| -.|.+.. |. +|+ +.+.||+-..|.|--|.+.+..+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pd-i~IDtMGY~fs~-p~-~r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPD-IFIDTMGYPFSY-PI-FRR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCch-heEecCCCcchh-HH-HHH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 55555566666665553 344 556 466 4455442 32 333 45899999999988777766543322111 1
Q ss_pred hhcCCEEEEeCHHHHHHHHHH------HHHHhCccc--CCCce-eeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHH
Q 002314 285 VLAADLVGFHTYDYARHFVSA------CTRILGFEG--TPEGV-EDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 355 (937)
Q Consensus 285 ll~aDlIgF~t~~~~~~Fl~~------~~r~lg~~~--~~~~v-~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~ 355 (937)
+| .+----|-|.|..- |..+.-+.. +...| +.-++ ..+.++.+-.+++.+.....+
T Consensus 200 ~l-----~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~-~~~~iVyPPC~~e~lks~~~t--------- 264 (465)
T KOG1387|consen 200 IL-----VWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS-NTCSIVYPPCSTEDLKSKFGT--------- 264 (465)
T ss_pred hh-----hhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc-cceeEEcCCCCHHHHHHHhcc---------
Confidence 11 11112344555431 111100000 00111 11122 233333333455444332211
Q ss_pred HHHHhcCCcEEEEEecccccCCHHHHHHHHHHhHHhCcC--ccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhccc
Q 002314 356 LQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (937)
Q Consensus 356 lr~~~~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~--~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~ 433 (937)
+-.....+|+++.+-|.|+.. .|+-+..++.+.|. ....+.|+++| ..|+.. ++ +.-+.++.++.+++-.
T Consensus 265 ---e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRnee-D~-ervk~Lkd~a~~L~i~- 336 (465)
T KOG1387|consen 265 ---EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEE-DE-ERVKSLKDLAEELKIP- 336 (465)
T ss_pred ---cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChh-hH-HHHHHHHHHHHhcCCc-
Confidence 012456899999999999999 78888888888887 33457787666 455432 22 3345667777776642
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc--ccc----C-Cce
Q 002314 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QSL----G-AGA 506 (937)
Q Consensus 434 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~--~~l----g-~~g 506 (937)
..|.| .-+++.+++..+|..|-+.|-+-..|-||+.+.||||+ |.+.++..+|.. ..+ | .+|
T Consensus 337 -----~~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-----GlIpi~h~SgGP~lDIV~~~~G~~tG 405 (465)
T KOG1387|consen 337 -----KHVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-----GLIPIVHNSGGPLLDIVTPWDGETTG 405 (465)
T ss_pred -----cceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-----CceEEEeCCCCCceeeeeccCCccce
Confidence 24664 78899999999999999999999999999999999999 455555444443 222 4 468
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHH
Q 002314 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (937)
Q Consensus 507 llVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~ 561 (937)
++. | +.++-|++|.+++.+..+||..+...+|..+.+++-+..-++|...+..
T Consensus 406 Fla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 406 FLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred eec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 887 3 5678999999999999999888777888888888888877777655543
No 127
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.14 E-value=4.5e-10 Score=114.30 Aligned_cols=190 Identities=17% Similarity=0.224 Sum_probs=115.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc---CceEEe
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 666 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~---~l~lia 666 (937)
..++||+|+||||++..-.| ......|.+|.. .|..|+.+|..+...+..+-..+ +.++|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 46899999999999964433 234566777764 69999999999999987776665 478999
Q ss_pred eCceEEEecCCeeeecc--c------cccCh-hHHHHHHHHHHHHHhcCCCceee----------------------eec
Q 002314 667 ENGMFLRCTTGKWMTTM--P------EHLNM-EWVDSLKHVFEYFTERTPRSHFE----------------------QRE 715 (937)
Q Consensus 667 enG~~ir~~~~~w~~~~--~------~~~~~-~w~~~v~~il~~~~~~~~Gs~iE----------------------~K~ 715 (937)
|||+.|..+. .|...- + ..... .-.+.+++.++.+.+...-.++. ..+
T Consensus 70 EnG~aI~~p~-~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLPK-GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEecc-cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 9999998532 222100 0 00000 01223333333332211111110 011
Q ss_pred ceEEEEeeccChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCC-ceEE
Q 002314 716 TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI-DYVL 794 (937)
Q Consensus 716 ~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~-d~vl 794 (937)
++.++-.|..| +.+.++ ...+...++.+++|....-|.-....||.|++++++.+.. .+. .-++
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~r-----l~~~r~t~ 213 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRR-----LGGARTTL 213 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHh-----cCceeEEE
Confidence 11111122111 111111 2222334788999988888888778899999999998752 233 3489
Q ss_pred EEecCCCCcHHHHHhcCc
Q 002314 795 CIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 795 ~iGD~d~nDEdMf~~~~~ 812 (937)
.+|| +.||.+||+.+..
T Consensus 214 ~~GD-g~nD~Pl~ev~d~ 230 (274)
T COG3769 214 GLGD-GPNDAPLLEVMDY 230 (274)
T ss_pred ecCC-CCCcccHHHhhhh
Confidence 9999 9999999998865
No 128
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.01 E-value=4e-08 Score=116.82 Aligned_cols=275 Identities=12% Similarity=0.112 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHh----CCCCCEEE--EeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCcc--chHHHHhh
Q 002314 214 YIKANQMFADVVNKH----YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS--RSDLLRAV 285 (937)
Q Consensus 214 Y~~vN~~fA~~i~~~----~~~~DvVw--vHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~--r~eil~~l 285 (937)
|...+..++..+.+. ..++|++. ++.-|... +....|.-++.+..|+ -+ . |. -+..+..+
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~--~-----~~~~y~~~l~~~ 270 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ER--N-----RHHTYLDLYESL 270 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Cc--c-----cccchhhhhhCh
Confidence 334444444443333 56788887 67666665 3333343345446665 11 1 21 24566677
Q ss_pred hcCCEEEEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcE
Q 002314 286 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKV 365 (937)
Q Consensus 286 l~aDlIgF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~i 365 (937)
-.+|.|...|..-.+..... ++. .. ...+|..+|++.- +.... ..++..++.|
T Consensus 271 ~~~d~iIv~T~~q~~~l~~~----~~~--------~~-~~~~v~~Ip~~~~--~~~~~------------~s~r~~~~~I 323 (519)
T TIGR03713 271 SRADLIIVDREDIERLLEEN----YRE--------NY-VEFDISRITPFDT--RLRLG------------QSQQLYETEI 323 (519)
T ss_pred hhcCeEEEcCHHHHHHHHHH----hhh--------cc-cCCcceeeCccce--EEecC------------hhhcccceEE
Confidence 78887776665433322211 110 00 1234555676544 11110 1122234556
Q ss_pred EEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC--------
Q 002314 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-------- 437 (937)
Q Consensus 366 IL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~-------- 437 (937)
.+++||| +.|-+..+|+|+.++++++|++. |.+.|... .. ++.+.+++++.++|..++...
T Consensus 324 ~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~---~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 392 (519)
T TIGR03713 324 GFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN---DN---DITQLLEDILEQINEEYNQDKNFFSLSEQ 392 (519)
T ss_pred EEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC---ch---hHHHHHHHHHHHHHhhhchhhhccccchh
Confidence 6667799 99999999999999999999865 66565432 11 234566667677765432100
Q ss_pred --------------cccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-
Q 002314 438 --------------AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (937)
Q Consensus 438 --------------~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l- 502 (937)
-...+.|.+..+..++...|.-|.++|.+|..|||+ +.+||++. |++++ .-|.++.+
T Consensus 393 ~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~-----GiPqI--nyg~~~~V~ 464 (519)
T TIGR03713 393 DENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA-----GIPQI--NKVETDYVE 464 (519)
T ss_pred hhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc-----CCCee--ecCCceeeE
Confidence 002344677778889999999999999999999999 99999997 54444 56777777
Q ss_pred -CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHH
Q 002314 503 -GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 549 (937)
Q Consensus 503 -g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~ 549 (937)
|.+|++| .|..++++||..+|..+. ...+.....++.+..++..
T Consensus 465 d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS~~ 509 (519)
T TIGR03713 465 HNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYSSE 509 (519)
T ss_pred cCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhHH
Confidence 8899999 699999999999998653 3344444555555555433
No 129
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.00 E-value=5.4e-08 Score=109.89 Aligned_cols=239 Identities=14% Similarity=0.031 Sum_probs=142.7
Q ss_pred HHHhCCCCCEEEEeCcccch--HHH-HHHh-hCCCCeEEEEEccCCCchhhhccCc-cchHHHHhhhcCCEEEEeCHHHH
Q 002314 225 VNKHYKDGDVVWCHDYHLMF--LPK-CLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 299 (937)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~l--lp~-~Lr~-~~~~~~I~~flH~PfPs~e~fr~lp-~r~eil~~ll~aDlIgF~t~~~~ 299 (937)
+...+++||+|++|...++. ++. ++++ +..++|+++++|--||-. +.... ........+-.||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45568899999999854432 222 2222 112799999999876632 11111 12233444457899999988755
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEecccccCCHH
Q 002314 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (937)
Q Consensus 300 ~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~VdRld~~KGi~ 379 (937)
+.+.+ .|. ...++.++++..+...... +....+++.|+++||+....++.
T Consensus 136 ~~l~~-----~g~-----------~~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGL-----------TTDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCC-----------CcCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 121 1223444444332211100 01123456899999999433211
Q ss_pred HHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
+..|+ +.|+++|. +++.. .. ...|+| .|.++.+|+..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~-----g~~~~-----------~~--------~~~V~f-~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGP-----NPEDL-----------EN--------SANISY-KGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECC-----Ccccc-----------cc--------CCCeEE-ecCCCHHHHHHHHhc
Confidence 12344 44776653 22110 00 024665 789999999999998
Q ss_pred ccEEEECCC-----------CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHc
Q 002314 460 TDVALVTSL-----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (937)
Q Consensus 460 ADv~vv~Sl-----------~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (937)
|+.+++.- .-.++--..|||||+ .|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 66665432 123445588999994 799999998888888 56799998 678899999874
Q ss_pred CCHHHHHHHHHhhhhhhh
Q 002314 527 MSPEEREKRHWHNFTHVT 544 (937)
Q Consensus 527 m~~~er~~r~~~~~~~V~ 544 (937)
.++++.++.++.++..+
T Consensus 298 -~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 298 -TEEEYQEMVENVKKISK 314 (333)
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 35666666666665543
No 130
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.99 E-value=2e-09 Score=104.38 Aligned_cols=130 Identities=25% Similarity=0.301 Sum_probs=88.7
Q ss_pred CcEEEEEecccccCCHHHHHH-HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 363 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 363 ~~iIL~VdRld~~KGi~~~l~-Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
..+|++.|++.+.||+..+++ |++++.+++|++ .|+++|. +++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G~-----~~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIGN-----GPD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEECE-----SS-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEeC-----CHH------HHHHh-cC----------CCE
Confidence 357889999999999999999 999999999974 4777764 222 12222 11 246
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (937)
++ .+.+ +++.++|+.||+++.|+. .++++..++|||+++ .|+|+|.. |....+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 65 5677 689999999999999985 689999999999994 78888877 555544 2456677 88999999
Q ss_pred HHHHHHHcC
Q 002314 519 NAIARALNM 527 (937)
Q Consensus 519 ~aI~~aL~m 527 (937)
++|.+++++
T Consensus 127 ~~i~~l~~d 135 (135)
T PF13692_consen 127 EAIERLLND 135 (135)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHhcC
Confidence 999999863
No 131
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.97 E-value=4.6e-08 Score=111.99 Aligned_cols=151 Identities=19% Similarity=0.191 Sum_probs=96.2
Q ss_pred HHHHHhc---CCcEE-EEEe-cccccC-CHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q 002314 355 ELQETFA---GRKVM-LGVD-RLDMIK-GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR 428 (937)
Q Consensus 355 ~lr~~~~---~~~iI-L~Vd-Rld~~K-Gi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~ 428 (937)
.++++++ ++++| +..| |....| ++..+++|++.+.+++|+++ +++++. +.+. ++++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~----~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKR----REQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----Chhh----HHHHHHHHhh
Confidence 3445553 45554 3334 666654 47889999999988888653 555542 1222 2334444332
Q ss_pred hhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe---------------
Q 002314 429 INGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--------------- 493 (937)
Q Consensus 429 IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS--------------- 493 (937)
.. |. .+.++. .++..+|+.||++|.+| |.+.+|+|+|+ .|+|++
T Consensus 243 ~~---~~----~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~ 301 (380)
T PRK00025 243 YA---GL----EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLV 301 (380)
T ss_pred cC---CC----CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHH
Confidence 20 11 244332 47899999999999998 78888999994 677776
Q ss_pred --CCCCcccccC----CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 494 --EFAGAAQSLG----AGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 494 --e~aG~~~~lg----~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
.+.|..+.+. ..+++.+..|+++++++|.++|+++ +.++++.+++
T Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 302 KVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred cCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 3444455551 1346778889999999999999865 3444444443
No 132
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.90 E-value=4.8e-07 Score=105.95 Aligned_cols=306 Identities=16% Similarity=0.191 Sum_probs=153.3
Q ss_pred EEEEeCcccchHHHHHHhhCCCCeEEEEEccCCC-------chhhhccCcc---chH-----------HHH-hhhcCCEE
Q 002314 234 VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS---RSD-----------LLR-AVLAADLV 291 (937)
Q Consensus 234 vVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfP-------s~e~fr~lp~---r~e-----------il~-~ll~aDlI 291 (937)
+.|.|.|..-+-..++|++.|++.-+|+.|.--+ ..++|..|+. .++ +-+ ....||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 3477888887777889999999999999996422 1122333331 000 110 11122332
Q ss_pred EEeCHHHHHHHHHHHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhc----CCchHHHHHHH-HHHh-c----
Q 002314 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE----INPVQVHIKEL-QETF-A---- 361 (937)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~----~~~~~~~~~~l-r~~~-~---- 361 (937)
-+-+.--+. .|..+| +|... .|.|||+|.+.|...-. ....++.+.++ +..+ +
T Consensus 226 TTVSeITa~----Ea~~LL------------~r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~df 288 (633)
T PF05693_consen 226 TTVSEITAK----EAEHLL------------KRKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDF 288 (633)
T ss_dssp EESSHHHHH----HHHHHH------------SS--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S
T ss_pred eehhhhHHH----HHHHHh------------CCCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 222221111 122222 22222 36799999987754311 00122333333 2222 1
Q ss_pred --CCcEEE-EEeccc-ccCCHHHHHHHHHHhHH---hCcCccCcEEEEEEEcCCCCChhH---------HHHHHHHHHHH
Q 002314 362 --GRKVML-GVDRLD-MIKGIPQKLLAFEKFLE---ENSDWRGKVVLLQIAVPTRTDVPE---------YQRLTSQVHEI 425 (937)
Q Consensus 362 --~~~iIL-~VdRld-~~KGi~~~l~Af~~ll~---~~P~~~~~v~Lvqi~~p~r~~~~~---------y~~l~~~l~~l 425 (937)
++.+++ ..||.+ ..||++..|+|+.+|-. ..-. +.-|+..|..|+....-. +.+|++.+.++
T Consensus 289 d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i 366 (633)
T PF05693_consen 289 DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEI 366 (633)
T ss_dssp -GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHH
Confidence 345554 588997 67999999999998843 2111 122333344465443210 12222222222
Q ss_pred HHHhhc-----------------------------------------------------------cc----CCCCcccEE
Q 002314 426 VGRING-----------------------------------------------------------RF----GTLTAVPIH 442 (937)
Q Consensus 426 v~~IN~-----------------------------------------------------------~~----g~~~~~pV~ 442 (937)
.++|.. +. ...+-..|+
T Consensus 367 ~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVI 446 (633)
T PF05693_consen 367 QEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVI 446 (633)
T ss_dssp HHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEE
T ss_pred HHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEE
Confidence 222211 00 012234566
Q ss_pred EeCCCCC------HHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-------CCceEEE
Q 002314 443 HLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAILV 509 (937)
Q Consensus 443 ~~~~~v~------~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-------g~~gllV 509 (937)
|...+++ .-++..+.+.+|+.|+||+||.+|.+++|+.|. +.|-|.|..+|....+ ...|+.|
T Consensus 447 F~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~----gVPsITTnLsGFG~~~~~~~~~~~~~GV~V 522 (633)
T PF05693_consen 447 FHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF----GVPSITTNLSGFGCWMQEHIEDPEEYGVYV 522 (633)
T ss_dssp E--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT----T--EEEETTBHHHHHHHTTS-HHGGGTEEE
T ss_pred EeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhc----CCceeeccchhHHHHHHHhhccCcCCcEEE
Confidence 5544443 336788899999999999999999999999998 4799999999987544 2346655
Q ss_pred -CC--CC----HHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHh
Q 002314 510 -NP--WN----ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 510 -nP--~D----~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~ 562 (937)
+= .+ ++++|+.|.....++..+|.....+..+.-...+|.+-...+.+.-..+
T Consensus 523 vdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 523 VDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp E-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 32 23 3467777778888888777766666655556677777666665544433
No 133
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.88 E-value=1.1e-06 Score=108.16 Aligned_cols=181 Identities=16% Similarity=0.125 Sum_probs=123.0
Q ss_pred EEEEEecccccCCHHHHHHHHHHhHH--hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 365 VMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 365 iIL~VdRld~~KGi~~~l~Af~~ll~--~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
+|.++.|+...||...++..+++|.+ .+|+ ..+.||..|.+...+... +++.+++.++... -+|. ..|.
T Consensus 480 tigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~g-K~iIk~i~~~a~~--p~~~----~kVv 550 (778)
T cd04299 480 TIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPG-KELIQEIVEFSRR--PEFR----GRIV 550 (778)
T ss_pred EEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHH-HHHHHHHHHHHhC--cCCC----CcEE
Confidence 78899999999999999999999865 2444 247888887654433221 3445555555431 0221 1577
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECC-------
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------- 511 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP------- 511 (937)
|+. ..+..--..++..|||++.||. .|.-|+.-+=||.- |+|-+|..-|...+. |.+|..|.+
T Consensus 551 fle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~~ 624 (778)
T cd04299 551 FLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYEDD 624 (778)
T ss_pred EEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccCh
Confidence 654 4566666788999999999999 99999998888874 889999888888776 788999988
Q ss_pred -----CCHHHHHHHHHHHHc----CC-----HHHHHHHHHhhhh-hhhcCCHHHHHHHHHHHHH
Q 002314 512 -----WNITEVANAIARALN----MS-----PEEREKRHWHNFT-HVTTHTAQEWAETFVSELN 560 (937)
Q Consensus 512 -----~D~~~lA~aI~~aL~----m~-----~~er~~r~~~~~~-~V~~~~~~~W~~~fl~~l~ 560 (937)
.|.+++-+.|.+.+- .. +.+-.+++++... ..-.+++.+=++.|++.+.
T Consensus 625 ~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 625 EYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 556666666654433 10 1233344443332 2346777777777776654
No 134
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.49 E-value=1.3e-05 Score=92.40 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=83.9
Q ss_pred CCcEEEE--Eecccc-cCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCc
Q 002314 362 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (937)
Q Consensus 362 ~~~iIL~--VdRld~-~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~ 438 (937)
++++|+. .+|..+ .|+++.+++|++.+.+.+|+++ +++.+.+. .. ...++++....+ . .
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~----~~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KR----RLQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hh----HHHHHHHHHHhC----C-C-
Confidence 5566543 359887 7999999999999998888764 44333221 11 122233332221 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeC-----------------CCCcccc
Q 002314 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 501 (937)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe-----------------~aG~~~~ 501 (937)
..|.++.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13544432 3457999999999999 77778999995 6767662 2222222
Q ss_pred c-CCceE--EE-CCCCHHHHHHHHHHHHcCC
Q 002314 502 L-GAGAI--LV-NPWNITEVANAIARALNMS 528 (937)
Q Consensus 502 l-g~~gl--lV-nP~D~~~lA~aI~~aL~m~ 528 (937)
+ +.+++ ++ +-.+++.++++|.++|+++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 3 22221 12 3357889999999999876
No 135
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.44 E-value=5.2e-07 Score=86.20 Aligned_cols=62 Identities=18% Similarity=0.280 Sum_probs=48.0
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
+++||+||||++...... ......+.+.+.+.|++|.+. |..++|+||+....+..++...+
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcC
Confidence 479999999998742100 001246788999999999974 89999999999999998887654
No 136
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.43 E-value=1e-06 Score=80.06 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=73.2
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhh
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (937)
|++.|+..+|++...+|+|||+ +++|.+...+....+ |..++.++ |+++++++|..+|+.| +++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4677888999999999999993 566655566777777 55788888 9999999999999965 6888888899
Q ss_pred hhhhh-cCCHHHHHHHHH
Q 002314 540 FTHVT-THTAQEWAETFV 556 (937)
Q Consensus 540 ~~~V~-~~~~~~W~~~fl 556 (937)
+++|. .|++.+-+++||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 99985 899998888876
No 137
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.42 E-value=1.4e-06 Score=90.72 Aligned_cols=172 Identities=18% Similarity=0.278 Sum_probs=104.2
Q ss_pred HHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc-cc----CceEEeeCceEEEecCC-eeeeccccccChhHHH-HHHHHH
Q 002314 627 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-EY----NLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVD-SLKHVF 699 (937)
Q Consensus 627 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~-~~----~l~liaenG~~ir~~~~-~w~~~~~~~~~~~w~~-~v~~il 699 (937)
+.+.|.+|.+ ...|+||||-.+..+.+.+. .- -.++-++||...+..+. .|...+.+....+-+. .+..++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899986 79999999999999888774 22 24799999998875443 4543331222222222 233333
Q ss_pred HHHHh----cCCCceeeeecceEEEEe--eccChh----hhH----HH-HHHHHHHHhcCCCCCCCeEEEE-cCeEEEEE
Q 002314 700 EYFTE----RTPRSHFEQRETSLVWNY--KYADVE----FGR----IQ-ARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 763 (937)
Q Consensus 700 ~~~~~----~~~Gs~iE~K~~sl~~hy--r~ad~e----~~~----~~-a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~ 763 (937)
.+..+ ..-|.+||.+...+.+.- |++..+ |.. .. -..+.+.| ..-+...++++.. |.-.++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 33322 134899999999998863 333211 110 01 12344455 3334555787765 57899999
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec---CCCCcHHHHHhc
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH---FLGKDEDVYAFF 810 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD---~d~nDEdMf~~~ 810 (937)
|+|++|..++++|.+. ..+.+++||| -+.||-++|...
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~~ 198 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFEDP 198 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHST
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeecC
Confidence 9999999999987553 1689999999 235888888653
No 138
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.32 E-value=1.2e-05 Score=81.21 Aligned_cols=187 Identities=18% Similarity=0.270 Sum_probs=119.1
Q ss_pred HHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc--C-
Q 002314 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N- 661 (937)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~--~- 661 (937)
++++-..-|+.+|.||||++. ...++|++.+.|++|.. ..++-+|-|.+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 445556679999999999986 35689999999999875 7899999999988887777542 2
Q ss_pred -ceEEeeCceEEEecCCeee--eccccccC-hhHHHHHHHHHHHHHhc----CCCceeeeecceEEEEe--eccCh----
Q 002314 662 -LWLAAENGMFLRCTTGKWM--TTMPEHLN-MEWVDSLKHVFEYFTER----TPRSHFEQRETSLVWNY--KYADV---- 727 (937)
Q Consensus 662 -l~liaenG~~ir~~~~~w~--~~~~~~~~-~~w~~~v~~il~~~~~~----~~Gs~iE~K~~sl~~hy--r~ad~---- 727 (937)
.+.-+|||..-...+.... ... ..+. ...++-+.-.+.+..+- ..|.+||-+...+.+.- |++..
T Consensus 69 fDY~F~ENGl~~yk~gk~~~~Qsi~-~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~ 147 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLSKQSII-NHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERN 147 (252)
T ss_pred hcccccCCCeeEeeCCcchhHHHHH-HHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHH
Confidence 4778999988764333211 111 0011 11122222233343321 34889988776665442 33321
Q ss_pred hhhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 728 EFGR-----IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 728 e~~~-----~~a~el~~~L~~~~~~~~~v~v~~-Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
+|.. ..-..+...| .+-+...++.... |.-.++|-|.||+|-..+++|-+. + .+.+-+|||
T Consensus 148 eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 148 EFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 1211 1112344444 3334556777544 466899999999999999887554 3 678999999
No 139
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.29 E-value=0.00023 Score=80.74 Aligned_cols=304 Identities=19% Similarity=0.211 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcc------cchHHHHHHhhCCCCeEEEEEccCC---------CchhhhccCccc-
Q 002314 215 IKANQMFADVVNKHYKDGDVVWCHDYH------LMFLPKCLKEYNSDMKVGWFLHTPF---------PSSEIHRTLPSR- 278 (937)
Q Consensus 215 ~~vN~~fA~~i~~~~~~~DvVwvHDyh------l~llp~~Lr~~~~~~~I~~flH~Pf---------Ps~e~fr~lp~r- 278 (937)
++.+.+|+-.--..-.++-.||+|--. +..|-.-|+++.|+.+|..+.-||- +..-..+.+|..
T Consensus 32 ~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~ 111 (419)
T COG1519 32 KRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDL 111 (419)
T ss_pred HHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCc
Confidence 345677761111122256799999744 2333444888999999999876652 222223445532
Q ss_pred hHHHHhh---hcCCEEEEeCHHHHHHHHHHHHHHhCccc-------CCCce-eeC---------CeeeEEEEEecccChh
Q 002314 279 SDLLRAV---LAADLVGFHTYDYARHFVSACTRILGFEG-------TPEGV-EDQ---------GRLTRVAAFPIGIDSE 338 (937)
Q Consensus 279 ~eil~~l---l~aDlIgF~t~~~~~~Fl~~~~r~lg~~~-------~~~~v-~~~---------gr~~~i~v~P~GID~~ 338 (937)
.-..+.. ...|+..|...+.=-|++..|.+. |... +..+. .|. -......+.-.-+|.+
T Consensus 112 ~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~ 190 (419)
T COG1519 112 PIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQ 190 (419)
T ss_pred hHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHH
Confidence 1222222 245666666666666666666432 1110 00000 000 0000000111112222
Q ss_pred hhhhh---------------hcCCchHHHHHHHHHHhcC-CcEEEEEecccccCCH-HHHHHHHHHhHHhCcCccCcEEE
Q 002314 339 RFIRA---------------LEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVL 401 (937)
Q Consensus 339 ~f~~~---------------~~~~~~~~~~~~lr~~~~~-~~iIL~VdRld~~KGi-~~~l~Af~~ll~~~P~~~~~v~L 401 (937)
+|... ...+........+|.++++ +++++..+. ..|= .-.+.++..+++++|+.. |
T Consensus 191 Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST---H~GEeei~l~~~~~l~~~~~~~l----l 263 (419)
T COG1519 191 RFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST---HEGEEEIILDAHQALKKQFPNLL----L 263 (419)
T ss_pred HHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC---CCchHHHHHHHHHHHHhhCCCce----E
Confidence 22211 0122334566778888876 899999888 3343 447889999999999753 3
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC-------cccEEEeCCCCCHHHHHHHHHHccEEEECC-C--CcC
Q 002314 402 LQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-------AVPIHHLDRSLDFPALCALYAVTDVALVTS-L--RDG 471 (937)
Q Consensus 402 vqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~-------~~pV~~~~~~v~~~el~aly~~ADv~vv~S-l--~EG 471 (937)
|+| | ..|| -...+++++.+.|-+++.-. -.+|... -+.-|+..+|+.|||+.+-- + .-|
T Consensus 264 IlV--P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~---DtmGEL~l~y~~adiAFVGGSlv~~GG 332 (419)
T COG1519 264 ILV--P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLG---DTMGELGLLYGIADIAFVGGSLVPIGG 332 (419)
T ss_pred EEe--c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEE---ecHhHHHHHHhhccEEEECCcccCCCC
Confidence 333 4 2343 23567788887776553211 1244421 25689999999999988743 3 468
Q ss_pred CChhHHHHHHhcCCCCceEEEe----CCCCccccc-C-CceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhc
Q 002314 472 MNLVSYEFVACQDLKKGVLILS----EFAGAAQSL-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTT 545 (937)
Q Consensus 472 ~nLv~~EamAc~~~~~g~lVlS----e~aG~~~~l-g-~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~ 545 (937)
.|+ +|+.+|. .|+|.. .|.-+++.+ . .+++.|+. .+.++.++...+.+ +++|.++.+++.+.|.+
T Consensus 333 HN~--LEpa~~~----~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 333 HNP--LEPAAFG----TPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQ 403 (419)
T ss_pred CCh--hhHHHcC----CCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHH
Confidence 887 9999993 455543 344444444 2 35677764 77888888888776 67888888888887765
Q ss_pred C
Q 002314 546 H 546 (937)
Q Consensus 546 ~ 546 (937)
+
T Consensus 404 ~ 404 (419)
T COG1519 404 N 404 (419)
T ss_pred h
Confidence 4
No 140
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.19 E-value=0.00022 Score=83.44 Aligned_cols=121 Identities=14% Similarity=0.216 Sum_probs=91.5
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~ 458 (937)
...|+|++.+.+..|++. |=+ |.++ + +...|.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999975 543 4333 1 11334444 22 2 23554444 45567899999
Q ss_pred HccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe--CCCCcccccCCceEEECCCCHHHHHHHHHHHHcCCH
Q 002314 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--EFAGAAQSLGAGAILVNPWNITEVANAIARALNMSP 529 (937)
Q Consensus 459 ~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS--e~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (937)
.||+++.+|..||+++.+.||+.. |.+|+| ...|-.+.+ ..|.+|++.|+++|+++|.++|+++.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999996 667776 444555555 56999999999999999999999874
No 141
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.09 E-value=5.4e-06 Score=83.52 Aligned_cols=77 Identities=13% Similarity=0.085 Sum_probs=55.1
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH---HHhcc-------cC-
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-------YN- 661 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~---~~~~~-------~~- 661 (937)
++++|+||||+..... +.... .. ....+++.+.+++++|.+ .|+.|+++|||+..... +++.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~-~~-~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVP-II-GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccc-cc-ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999976310 00000 00 013678999999999987 69999999999988774 66655 22
Q ss_pred ceEEeeCceEEE
Q 002314 662 LWLAAENGMFLR 673 (937)
Q Consensus 662 l~liaenG~~ir 673 (937)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 378899998875
No 142
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.08 E-value=1.7e-05 Score=79.64 Aligned_cols=38 Identities=26% Similarity=0.115 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+|..+++.++++++ .+++.++++|| +.||.+|++.++-
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~ 113 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGL 113 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 58899999999988 46789999999 9999999998864
No 143
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.01 E-value=1.2e-05 Score=83.13 Aligned_cols=37 Identities=24% Similarity=0.106 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|..+++.++++++ ..++++++||| +.+|.+|++.++-
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~ 133 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGL 133 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 6788999999988 46899999999 9999999999975
No 144
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.86 E-value=2.7e-05 Score=75.24 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=41.0
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhH
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 653 (937)
|+|++|+||||+.....|- ....+.++++++|++|.+ .|+.|+++|||+....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTY 54 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhh
Confidence 6899999999986532110 114578899999999976 5999999999988654
No 145
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.62 E-value=0.00013 Score=79.69 Aligned_cols=72 Identities=15% Similarity=0.284 Sum_probs=57.4
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc----e
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----W 663 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~ 663 (937)
...++|+||+||||++... ..++ +|.+.++|.+|.+ .|..++|+|+++...+...+..+++ .
T Consensus 124 ~~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFd 190 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFD 190 (301)
T ss_pred ccceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccC
Confidence 4568999999999998742 2334 4999999999987 5999999999999998888888754 3
Q ss_pred EEeeCceEEE
Q 002314 664 LAAENGMFLR 673 (937)
Q Consensus 664 liaenG~~ir 673 (937)
.|..+|...+
T Consensus 191 vIIs~Gdv~~ 200 (301)
T TIGR01684 191 IIISGGHKAE 200 (301)
T ss_pred EEEECCcccc
Confidence 6777776654
No 146
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.60 E-value=1.8e-05 Score=88.81 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 766 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+..|+.+++.++++++ ++++++++||| +.||.+|++.++-
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGl 285 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGL 285 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCC
Confidence 3589999999999998 57899999999 9999999999976
No 147
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.43 E-value=0.00081 Score=71.18 Aligned_cols=47 Identities=17% Similarity=0.142 Sum_probs=39.6
Q ss_pred EEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 759 SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 759 ~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
++-..-.+-.|..+++.+++.++ ++++.++++|| +.||.+||+.++.
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~ 181 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGL 181 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCC
Confidence 33344455689999999999998 56889999999 9999999999976
No 148
>PLN02954 phosphoserine phosphatase
Probab=97.34 E-value=0.0035 Score=66.39 Aligned_cols=36 Identities=17% Similarity=0.078 Sum_probs=28.7
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHh
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 809 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~ 809 (937)
.+-.|..+++++++.++ .+.+++||| +.+|..|-+.
T Consensus 152 ~~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~ 187 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKP 187 (224)
T ss_pred CCccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhc
Confidence 34568999999988875 357999999 9999988444
No 149
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.26 E-value=0.0011 Score=67.71 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|-..++.++++++ +.++++++||| +.||.+|++.++-
T Consensus 82 pkp~~~~~~~~~l~------~~~~ev~~iGD-~~nDi~~~~~ag~ 119 (169)
T TIGR02726 82 KKTEPYAQMLEEMN------ISDAEVCYVGD-DLVDLSMMKRVGL 119 (169)
T ss_pred CCHHHHHHHHHHcC------cCHHHEEEECC-CHHHHHHHHHCCC
Confidence 45567888888887 46789999999 9999999999975
No 150
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.13 E-value=0.00097 Score=72.96 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=54.0
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc----eE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 664 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l----~l 664 (937)
..++|+||+||||+.... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...+..+++ ..
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 458999999999998742 2223 5899999999987 6999999998888888888877643 24
Q ss_pred EeeCceEEE
Q 002314 665 AAENGMFLR 673 (937)
Q Consensus 665 iaenG~~ir 673 (937)
|..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 555665443
No 151
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.79 E-value=0.0016 Score=63.26 Aligned_cols=64 Identities=22% Similarity=0.357 Sum_probs=47.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC--------hhhHHHHhcccCc
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNL 662 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~--------~~~L~~~~~~~~l 662 (937)
|+|+||+||||++.... .+ +.....+.+.+.++|+.|.+ .|..++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~--~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VD--DEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CC--CHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 68999999999963110 00 11235678999999999986 599999999998 6677777776554
No 152
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=96.77 E-value=0.01 Score=62.59 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|+..++.++++++ ++++.+++||| +.+|.+|.+.++-
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag~ 189 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAGL 189 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCCC
Confidence 48999999999987 46789999999 9999999999865
No 153
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.40 E-value=0.0045 Score=67.19 Aligned_cols=64 Identities=5% Similarity=0.163 Sum_probs=50.2
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC---CChhhHHHHhcccCc-----e
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL-----W 663 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~~~~~~l-----~ 663 (937)
++|+||+||||.... ..+ +.+.++|++|.+ .|..|+++|| |+...+.+.+..+++ -
T Consensus 2 ~~~~~D~DGtl~~~~--------------~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK--------------ERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcCC--------------eeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 689999999999762 223 478999999987 5999999995 889998888877643 2
Q ss_pred EEeeCceE
Q 002314 664 LAAENGMF 671 (937)
Q Consensus 664 liaenG~~ 671 (937)
+++.+|+.
T Consensus 66 iit~~~~~ 73 (249)
T TIGR01457 66 VFTASMAT 73 (249)
T ss_pred EeeHHHHH
Confidence 66666664
No 154
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.38 E-value=0.19 Score=55.84 Aligned_cols=137 Identities=15% Similarity=0.209 Sum_probs=94.9
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHhHH-------hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCC
Q 002314 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLE-------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (937)
Q Consensus 363 ~~iIL~VdRld~~KGi~~~l~Af~~ll~-------~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~ 435 (937)
..++++--.+.+-..+--+++|+..+-+ .+|. + |++|+ |.||..+.+.++|++.
T Consensus 255 pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~---------- 315 (444)
T KOG2941|consen 255 PALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK---------- 315 (444)
T ss_pred CeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh----------
Confidence 3567778889999999999999985522 1332 3 34444 3455544555555543
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEE--CCCCcCCChh--HHHHHHhcCCCCceEEEeCCCCccccc--CCceEEE
Q 002314 436 LTAVPIHHLDRSLDFPALCALYAVTDVALV--TSLRDGMNLV--SYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (937)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv--~Sl~EG~nLv--~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllV 509 (937)
.|+.|.+.+-.+.-|+++.++..||..|. ||. -|+-|+ +....-| +-|+++-.|....|.+ |+||+++
T Consensus 316 -~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc----glPvcA~~fkcl~ELVkh~eNGlvF 389 (444)
T KOG2941|consen 316 -NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC----GLPVCAVNFKCLDELVKHGENGLVF 389 (444)
T ss_pred -cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC----CCceeeecchhHHHHHhcCCCceEe
Confidence 35678888889999999999999997664 443 455553 4455556 2345555666555555 8999999
Q ss_pred CCCCHHHHHHHHHHHHc
Q 002314 510 NPWNITEVANAIARALN 526 (937)
Q Consensus 510 nP~D~~~lA~aI~~aL~ 526 (937)
+ |.+++|+.|..+++
T Consensus 390 ~--Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 390 E--DSEELAEQLQMLFK 404 (444)
T ss_pred c--cHHHHHHHHHHHHh
Confidence 7 89999999999998
No 155
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.34 E-value=0.006 Score=59.24 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=43.2
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC-ChhhHHHHhcc
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQE 659 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~~~~ 659 (937)
|+|++|+||||.+...... ....+- ....+-+.+.+.|+.|.+ .|..++|+|++ ....+...+..
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~~-~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPII-DLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcch-hhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998731100 000000 000357899999999987 58999999999 66666555543
No 156
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.27 E-value=0.0034 Score=68.44 Aligned_cols=51 Identities=8% Similarity=0.112 Sum_probs=39.8
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 654 (937)
++|+||+||||...... ...+.|.+.++|++|.+ .|..++++|||+....+
T Consensus 2 k~i~~D~DGtl~~~~~~-----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~ 52 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK-----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQ 52 (257)
T ss_pred CEEEEeCCCeEEeCCCc-----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHH
Confidence 68999999999975210 11256799999999987 59999999998776533
No 157
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=96.26 E-value=0.017 Score=62.67 Aligned_cols=96 Identities=22% Similarity=0.330 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccchHHHHHHhhCC------CCeEEEEEccC-CCc---hhhhc--cCc
Q 002314 209 SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FPS---SEIHR--TLP 276 (937)
Q Consensus 209 ~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~------~~~I~~flH~P-fPs---~e~fr--~lp 276 (937)
+....|.-.+++-++.+...-..+||||+||||..++|.+||.... ++++.+++|.. |.. .+.+. .+|
T Consensus 111 d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~ 190 (245)
T PF08323_consen 111 DNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLP 190 (245)
T ss_dssp THHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-G
T ss_pred hHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCC
Confidence 3344555455555554444322579999999999999999998753 69999999974 221 12221 123
Q ss_pred cc--------------hHHHHhhhcCCEEEEeCHHHHHHHHH
Q 002314 277 SR--------------SDLLRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 277 ~r--------------~eil~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
+. .-+-.|+..||.|..-++.|++.-++
T Consensus 191 ~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 191 DEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 21 25567889999999999999876543
No 158
>PRK10444 UMP phosphatase; Provisional
Probab=96.17 E-value=0.0044 Score=67.25 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=44.4
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.++|+||+||||.... .+.|.+.++|++|.+ .|..++++|+|+......+...+
T Consensus 1 ~~~v~~DlDGtL~~~~---------------~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHDN---------------VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeCC---------------eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 3689999999999762 357889999999987 59999999999987766665554
No 159
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.13 E-value=0.014 Score=62.86 Aligned_cols=83 Identities=8% Similarity=-0.013 Sum_probs=53.9
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCCC--CC---CCCccc--------c-------ccccCCChhHHHHHHHhhc
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVDT--PG---RRGDQI--------R-------EMELKLHPDLKQPLNALCH 636 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~--P~---~~~~~~--------~-------~~~~~~~~~~~~~L~~L~~ 636 (937)
.+++++.+.+...+.-.|+||+||||++..+. -+ ....++ . .....+-+.+.+.|+.|.+
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~ 128 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH
Confidence 36778888887777679999999999987641 00 000000 0 0112334448999999987
Q ss_pred CCCCeEEEEcCC----ChhhHHHHhccc
Q 002314 637 DPKTTIVVLSGS----DRNVLDKNFQEY 660 (937)
Q Consensus 637 d~g~~V~IvSGR----~~~~L~~~~~~~ 660 (937)
.|.+++|||+| ....++.++..+
T Consensus 129 -~G~~i~iVTnr~~~k~~~~a~~ll~~l 155 (237)
T TIGR01672 129 -RGDAIFFVTGRTPGKTDTVSKTLAKNF 155 (237)
T ss_pred -CCCEEEEEeCCCCCcCHHHHHHHHHHh
Confidence 59999999999 444555555443
No 160
>PLN02645 phosphoglycolate phosphatase
Probab=96.02 E-value=0.0054 Score=68.84 Aligned_cols=54 Identities=11% Similarity=0.134 Sum_probs=42.6
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
+.++|+||+||||.... .+-+.+.++|++|.+ .|.+++++|+|+......++..
T Consensus 27 ~~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~ 80 (311)
T PLN02645 27 SVETFIFDCDGVIWKGD---------------KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKK 80 (311)
T ss_pred hCCEEEEeCcCCeEeCC---------------ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHH
Confidence 46899999999999752 244788999999987 5999999999996555544433
No 161
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.02 E-value=0.041 Score=60.57 Aligned_cols=41 Identities=12% Similarity=-0.066 Sum_probs=33.4
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+.+-.|..+++.++++++ ++++.+++||| ..+|..|-+.++
T Consensus 154 ~~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aG 194 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAG 194 (272)
T ss_pred CCCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCC
Confidence 334456778999999988 46799999999 999999987765
No 162
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.93 E-value=0.0065 Score=67.05 Aligned_cols=49 Identities=10% Similarity=0.165 Sum_probs=38.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHH
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 655 (937)
.++|+||+||||.... .+-+.+.++|++|.+ .|..++++|||+......
T Consensus 2 ~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~ 50 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGE---------------RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAE 50 (279)
T ss_pred ccEEEEeCCCceEcCC---------------eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHH
Confidence 5789999999998752 134569999999987 589999999987544333
No 163
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=95.69 E-value=0.00051 Score=84.11 Aligned_cols=221 Identities=15% Similarity=0.100 Sum_probs=131.3
Q ss_pred CCcchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhh--
Q 002314 575 PSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV-- 652 (937)
Q Consensus 575 ~~L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~-- 652 (937)
..++..++.+.....+.-|.++|+||||-.+..+| ..+.++..++.+-.+..+ ...-+++|||.+..
T Consensus 173 spfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~---------arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v 241 (732)
T KOG1050|consen 173 SPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDY---------ARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSV 241 (732)
T ss_pred CCCChHHHHHhcccHHHHHHhhhccCccccccccH---------HHHHHHHHHHHHHhhhhc--cCCcceEEeccceeee
Confidence 34566777777777777899999999999998877 345666666666666554 23456799999665
Q ss_pred --------HHHHhcccCceEEeeCceEEEecC-Ceeeecccccc-----ChhHHHHHHHHHHHHHhc-------------
Q 002314 653 --------LDKNFQEYNLWLAAENGMFLRCTT-GKWMTTMPEHL-----NMEWVDSLKHVFEYFTER------------- 705 (937)
Q Consensus 653 --------L~~~~~~~~l~liaenG~~ir~~~-~~w~~~~~~~~-----~~~w~~~v~~il~~~~~~------------- 705 (937)
..++.+..+++.+++||.+++... +.-..+--+.. ...+.....+.++.|.+-
T Consensus 242 ~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~ 321 (732)
T KOG1050|consen 242 KALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPK 321 (732)
T ss_pred eecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCC
Confidence 777777778999999999998522 11100000111 112334444445444321
Q ss_pred -CCCceeeeecceEEEEeeccChhhhHHHHHHHHHHHhcCCCCC-CCeEEEEcCeEEEEEE-CCCCHHHHHHHHHHHhcc
Q 002314 706 -TPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVH 782 (937)
Q Consensus 706 -~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~~~~-~~v~v~~Gk~~vEV~p-~gvnKG~Av~~Ll~~l~~ 782 (937)
++|.-+++-..++..||+..+..++...+ ..+ ..+... ...+...+..+.|++| ..+.||.++..+...++.
T Consensus 322 ~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~----~pV-~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~ 396 (732)
T KOG1050|consen 322 RTDGKEVEELKFCVSVHVRRINEKFGSASY----QPV-HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQ 396 (732)
T ss_pred cccchHHHHHHHHhHhhhhhhhhccCCccc----ceE-EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhh
Confidence 22222222234444555544433332110 000 000111 1233445667889998 689999999988877663
Q ss_pred cccCCCCCceEEEEecCCCCcHHHHHhcCcC
Q 002314 783 SKKMKTAIDYVLCIGHFLGKDEDVYAFFEPE 813 (937)
Q Consensus 783 ~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~ 813 (937)
.. -..+.=...++|| +.+||+.+..++.+
T Consensus 397 ~~-~~~~lVlsef~G~-~~tl~d~aivvnpw 425 (732)
T KOG1050|consen 397 EN-KKSVLVLSEFIGD-DTTLEDAAIVVNPW 425 (732)
T ss_pred cc-cCCceEEeeeccc-cccccccCEEECCc
Confidence 21 0112234589999 99999999999886
No 164
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=95.65 E-value=0.69 Score=52.62 Aligned_cols=257 Identities=16% Similarity=0.133 Sum_probs=131.3
Q ss_pred CCCCEEEEeCccc--chHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHL--MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 230 ~~~DvVwvHDyhl--~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
+++|++..=|+.= +.+...+|+..|++||.++. ++.+|.--|.|...+.. .+|++.-..+-- ..|.+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~--~~D~lLailPFE-~~~y~--- 152 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK--YVDHLLAILPFE-PAFYD--- 152 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH--HhhHeeeecCCC-HHHHH---
Confidence 4678888777663 36789999999999999875 23444433344222222 234432111111 11111
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhc---C-CcEEEEEe-cc-cccCCHHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---G-RKVMLGVD-RL-DMIKGIPQK 381 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~-~~iIL~Vd-Rl-d~~KGi~~~ 381 (937)
-.|.+ ..|-|+. =.|.-.+.+ ..+..|++++ + +.+.+.-| |- +-..-++-.
T Consensus 153 -k~g~~-----~~yVGHp--------l~d~i~~~~---------~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 153 -KFGLP-----CTYVGHP--------LADEIPLLP---------DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred -hcCCC-----eEEeCCh--------hhhhccccc---------cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHH
Confidence 00100 1122211 112111111 1123555552 3 44444444 33 445567777
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
++|++.+.+++|+++ ++.-.. .+.|+.+..+ ....-. . . ..++ +...+....|.+||
T Consensus 210 ~~a~~~l~~~~~~~~----~vlp~~-----~~~~~~~~~~---~~~~~~----~-~-~~~~-----~~~~~~~~a~~~aD 266 (381)
T COG0763 210 VQAAQELKARYPDLK----FVLPLV-----NAKYRRIIEE---ALKWEV----A-G-LSLI-----LIDGEKRKAFAAAD 266 (381)
T ss_pred HHHHHHHHhhCCCce----EEEecC-----cHHHHHHHHH---Hhhccc----c-C-ceEE-----ecCchHHHHHHHhh
Confidence 889999999999986 332221 1333333322 211100 0 0 0122 23467788899999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc-----------------cccCCceEEEC-----CCCHHHHHH
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-----------------QSLGAGAILVN-----PWNITEVAN 519 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~-----------------~~lg~~gllVn-----P~D~~~lA~ 519 (937)
+.+..| |.+.+|++.|+ .|.|++--+... ..+ .+-.+|+ -..++.+|.
T Consensus 267 ~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi-~~~~ivPEliq~~~~pe~la~ 336 (381)
T COG0763 267 AALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVKLPYVSLPNIL-AGREIVPELIQEDCTPENLAR 336 (381)
T ss_pred HHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhccCCcccchHHh-cCCccchHHHhhhcCHHHHHH
Confidence 999998 79999999995 566665333222 222 1111121 134788999
Q ss_pred HHHHHHcCCHH--HHHHHHHhhhhhhhcCCHHHHHH
Q 002314 520 AIARALNMSPE--EREKRHWHNFTHVTTHTAQEWAE 553 (937)
Q Consensus 520 aI~~aL~m~~~--er~~r~~~~~~~V~~~~~~~W~~ 553 (937)
++..++..+.. +..+....+++++.+.....-+.
T Consensus 337 ~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA 372 (381)
T COG0763 337 ALEELLLNGDRREALKEKFRELHQYLREDPASEIAA 372 (381)
T ss_pred HHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 99999987621 22233445555555542333333
No 165
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=95.51 E-value=0.027 Score=55.86 Aligned_cols=92 Identities=16% Similarity=0.241 Sum_probs=47.7
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCcc-----chHHHHh-hhcCCEEEEeCHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS-----RSDLLRA-VLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~-----r~eil~~-ll~aDlIgF~t~~~~~~Fl~ 304 (937)
+.|+||+|.++...+...... +.|+.+++|.+++.........+ ...+... .-.+|.|...+...++.+.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~ 156 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK 156 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH
Confidence 569999999887765544333 89999999998742111111111 1111112 34688888777655554433
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecccChhhhh
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 341 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~ 341 (937)
.|. ...++.++|+|||.+.|.
T Consensus 157 -----~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 157 -----FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -----HT-------------SS-EEE----B-CCCH-
T ss_pred -----hCC-----------cccCCEEEECCccHHHcC
Confidence 221 247899999999999884
No 166
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=95.51 E-value=0.02 Score=56.66 Aligned_cols=69 Identities=19% Similarity=0.363 Sum_probs=43.8
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.||+++|.||||++-.---+.-+..++. .+-.---.|+.|.+ .|++|+|+|||.-.-+++....+++
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~Ka----Fnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKA----FNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeee----eeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 467999999999999842100000111111 11112234555554 4999999999999999988887654
No 167
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.45 E-value=0.054 Score=54.36 Aligned_cols=68 Identities=16% Similarity=0.157 Sum_probs=58.0
Q ss_pred HHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceE
Q 002314 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWL 664 (937)
Q Consensus 585 ~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~l 664 (937)
...+...+-|++|+|.||++.. ....+|++++-+..+.. .|..|+|+|--+..-+..+...+++.+
T Consensus 22 ~L~~~Gikgvi~DlDNTLv~wd-------------~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 22 ILKAHGIKGVILDLDNTLVPWD-------------NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred HHHHcCCcEEEEeccCceeccc-------------CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 3456788999999999999983 34578999999999987 699999999999999999988888776
Q ss_pred Ee
Q 002314 665 AA 666 (937)
Q Consensus 665 ia 666 (937)
|.
T Consensus 88 i~ 89 (175)
T COG2179 88 IY 89 (175)
T ss_pred ee
Confidence 54
No 168
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.43 E-value=1.3 Score=51.14 Aligned_cols=235 Identities=19% Similarity=0.212 Sum_probs=124.1
Q ss_pred CCCCEEEEeCcccc--hHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (937)
Q Consensus 230 ~~~DvVwvHDyhl~--llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (937)
+++|+|..=||.=+ .+.+.+|++.+..||.++. ++.+|.==++|-..++.. +|.+.-.. .+-..|...
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~if-PFE~~~y~~-- 150 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLVIF-PFEPEFYKK-- 150 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeECC-cccHHHHhc--
Confidence 35688888887744 6788999998888888764 234544334554444442 23321111 111122210
Q ss_pred HHhCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh--cCCcEE-EEE-ecccccCCH-HHHH
Q 002314 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVM-LGV-DRLDMIKGI-PQKL 382 (937)
Q Consensus 308 r~lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iI-L~V-dRld~~KGi-~~~l 382 (937)
.|++ +.|-|+ +=+|. ... ... ....++.+ .++++| |.- +|-...|-+ +..+
T Consensus 151 --~g~~-----~~~VGH--------Pl~d~--~~~---~~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 151 --HGVP-----VTYVGH--------PLLDE--VKP---EPD----RAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred --cCCC-----eEEECC--------cchhh--hcc---CCC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 0100 112222 11221 111 010 11122222 344443 333 477655554 8889
Q ss_pred HHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccE
Q 002314 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (937)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (937)
+|.+++.+++|+++ +++...+. . ..+.+++.....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999875 44333221 1 122233333222211 123322 2456778999999
Q ss_pred EEECCCCcCCChhHHHHHHhcCCCCceEEEe-----------------CCCCccccc-CCce---EEECCCCHHHHHHHH
Q 002314 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILS-----------------EFAGAAQSL-GAGA---ILVNPWNITEVANAI 521 (937)
Q Consensus 463 ~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS-----------------e~aG~~~~l-g~~g---llVnP~D~~~lA~aI 521 (937)
.+++| |.+.+|++..+ .|.|+. .+.|....+ |... ++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99999 79999999885 444443 333333333 2111 222456889999999
Q ss_pred HHHHcCCHH
Q 002314 522 ARALNMSPE 530 (937)
Q Consensus 522 ~~aL~m~~~ 530 (937)
..+|.++..
T Consensus 335 ~~ll~~~~~ 343 (373)
T PF02684_consen 335 LELLENPEK 343 (373)
T ss_pred HHHhcCHHH
Confidence 999987643
No 169
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.42 E-value=0.023 Score=57.82 Aligned_cols=56 Identities=14% Similarity=0.232 Sum_probs=37.7
Q ss_pred CCeEEEEecCcccCCCCC-CCCCCCccccccccC-CChhHHHHHHHhhcCCCCeEEEEcCCCh
Q 002314 590 NNRLLILGFNATLTEPVD-TPGRRGDQIREMELK-LHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~-~P~~~~~~~~~~~~~-~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 650 (937)
+.|+++||+||||+.... .+ .-+.+ .+-+ +-+.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~---~~~~~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV---FPTSA-SDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc---ccCCh-HHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 458899999999997421 00 00001 1112 34789999999986 5999999997554
No 170
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.28 E-value=0.018 Score=59.02 Aligned_cols=51 Identities=10% Similarity=0.130 Sum_probs=38.1
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
+++|||.||||+...+-. + ...+..+-|.+.++|++|.+ .|.+++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~-----~-~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV-----H-EIDNFEFIDGVIDALRELKK-MGYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCC-----C-CHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 789999999999532211 0 00355677899999999987 589999999764
No 171
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.12 E-value=0.069 Score=54.49 Aligned_cols=61 Identities=13% Similarity=0.173 Sum_probs=46.7
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC-hhhHHHHhcccCc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYNL 662 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~~~~~~l 662 (937)
....+++++|+||||+... ...+.+.+.++|+.|.+ .+..++|+|+.+ ...+..++..+++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred HCCCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3567999999999999763 23567899999999986 589999999998 4555555444443
No 172
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.03 E-value=0.034 Score=55.22 Aligned_cols=53 Identities=19% Similarity=0.187 Sum_probs=38.5
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
+++|||+||||++..... ..+. .....+-|.+.++|+.|.+ .|..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~---~~~~-~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD---YPRS-LDDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcc---cCCC-HHHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 478999999999874210 0111 1234567899999999987 599999999876
No 173
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=94.95 E-value=0.065 Score=57.71 Aligned_cols=71 Identities=10% Similarity=0.012 Sum_probs=47.8
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCcc---------c------------cccccCCChhHHHHHHHhh
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQ---------I------------REMELKLHPDLKQPLNALC 635 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~---------~------------~~~~~~~~~~~~~~L~~L~ 635 (937)
..++++.+.....+...|.||+|||+++..+-.-. +.+ + ......+-+.++++|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~-~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWR-GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchhee-eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 35677777665555568999999999975321100 000 0 0123455667999999997
Q ss_pred cCCCCeEEEEcCCC
Q 002314 636 HDPKTTIVVLSGSD 649 (937)
Q Consensus 636 ~d~g~~V~IvSGR~ 649 (937)
+ .|..+++||||+
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 6 599999999996
No 174
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=94.82 E-value=3.3 Score=47.57 Aligned_cols=72 Identities=22% Similarity=0.167 Sum_probs=51.5
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc---CCceEEECCCCHHHH
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEV 517 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~l 517 (937)
|. +.+.++..++.+|++.||++|-.|. =++ .||.+.+ .|+| + .|-.++. |.+.++| +.|.+++
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg----~Pvv-~--l~~R~e~~~~g~nvl~v-g~~~~~I 329 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFG----VPTI-N--IGTRQKGRLRADSVIDV-DPDKEEI 329 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcC----CCEE-e--ecCCchhhhhcCeEEEe-CCCHHHH
Confidence 54 5789999999999999999995442 122 7999984 3333 2 2334443 5566778 6789999
Q ss_pred HHHHHHHHc
Q 002314 518 ANAIARALN 526 (937)
Q Consensus 518 A~aI~~aL~ 526 (937)
.+++.++++
T Consensus 330 ~~a~~~~~~ 338 (365)
T TIGR03568 330 VKAIEKLLD 338 (365)
T ss_pred HHHHHHHhC
Confidence 999999654
No 175
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=94.71 E-value=0.1 Score=55.39 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
-..+..+++.++ .+++.+++||| ..+|..|=+.++
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag 182 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAG 182 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcC
Confidence 345667788887 33579999999 999999988886
No 176
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=94.47 E-value=3.2 Score=46.81 Aligned_cols=168 Identities=19% Similarity=0.198 Sum_probs=101.6
Q ss_pred eEEEEEecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEEEEe-cccccCCHHHHHHHHHHhHHhCcCccCcEEEEEE
Q 002314 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404 (937)
Q Consensus 326 ~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL~Vd-Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi 404 (937)
..+-.+|.-+|+..-.... .....+++-+-|| .-|++-+..+.|+++..... .+ +.++ +
T Consensus 160 ~~~lyfPt~m~~~~~~~~~-------------~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~--~~----~kIi-v 219 (360)
T PF07429_consen 160 ASLLYFPTRMDPALTLSEK-------------NKKNKGKLTILVGNSGDPSNNHIEALEALKQQFG--DD----VKII-V 219 (360)
T ss_pred ceEEEcCCCCchhhhcccc-------------ccCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC--CC----eEEE-E
Confidence 3466788877765322110 0111223333344 56888888888877765432 12 2222 1
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCC-cCCChhHHHHHHhc
Q 002314 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQ 483 (937)
Q Consensus 405 ~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~-EG~nLv~~EamAc~ 483 (937)
|- +.+...+++.++|.+...++ ||.. .+..+...++.+|+.++++.||++++...| .|||..++ .+.+
T Consensus 220 --PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~- 288 (360)
T PF07429_consen 220 --PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL- 288 (360)
T ss_pred --EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-
Confidence 21 11112345667777766554 4432 345568899999999999999999999975 79998654 2444
Q ss_pred CCCCceEEEeCCCCcccccCCceEEE----CCCCHHHHHHHHHHHHcC
Q 002314 484 DLKKGVLILSEFAGAAQSLGAGAILV----NPWNITEVANAIARALNM 527 (937)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~lg~~gllV----nP~D~~~lA~aI~~aL~m 527 (937)
+.++++|+-.-....+.+-++.| +.-|...+++|=+++...
T Consensus 289 ---G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~ 333 (360)
T PF07429_consen 289 ---GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANV 333 (360)
T ss_pred ---CCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhC
Confidence 47999998887777773334433 455666666665555543
No 177
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.23 E-value=0.068 Score=54.15 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=38.4
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
+++|||.||||..... .....+.+ ....+-+.+.++|++|.+ .|..++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~--~~~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP--SDFQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCC--CccccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 6899999999997432 11111222 245677899999999987 58999999975
No 178
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=94.06 E-value=0.076 Score=51.64 Aligned_cols=84 Identities=18% Similarity=0.130 Sum_probs=44.2
Q ss_pred CCCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHH-----HHhhhcCCEEEEeCHHHHHHHHH
Q 002314 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-----LRAVLAADLVGFHTYDYARHFVS 304 (937)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~ei-----l~~ll~aDlIgF~t~~~~~~Fl~ 304 (937)
.+.|+|++|+++..+++.++++. .++|+.+.+|..+.... .++...+ -..+-.||.|...+...++.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877777777733 48999999997543211 1111112 23444689999888877666554
Q ss_pred HHHHHhCcccCCCceeeCCeeeEEEEEecc
Q 002314 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 334 (937)
Q Consensus 305 ~~~r~lg~~~~~~~v~~~gr~~~i~v~P~G 334 (937)
.| ....+|.++|||
T Consensus 147 -----~g-----------~~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YG-----------VPPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hC-----------CCCCcEEEeCcC
Confidence 12 234688899987
No 179
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=94.03 E-value=1.4 Score=52.09 Aligned_cols=203 Identities=13% Similarity=0.120 Sum_probs=100.8
Q ss_pred EEecccChhhhhhhhcCC-chHH-HHHHHHHHhc---CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEE
Q 002314 330 AFPIGIDSERFIRALEIN-PVQV-HIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404 (937)
Q Consensus 330 v~P~GID~~~f~~~~~~~-~~~~-~~~~lr~~~~---~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi 404 (937)
++-||.-.......+... ++.. .+-.-|+.|+ +..++.+..+ ..|=-+..++.+.++|+.-|+.+ |++.
T Consensus 247 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~----L~L~ 320 (468)
T PF13844_consen 247 VVQNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNN--LFKISPETLDLWARILKAVPNSR----LWLL 320 (468)
T ss_dssp EEEECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEE----EEEE
T ss_pred EeecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcE----EEEe
Confidence 346777766555433221 1110 0011244552 4444445555 45667899999999999999865 6555
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcC
Q 002314 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (937)
Q Consensus 405 ~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~ 484 (937)
..+. ... +.+++...+ .|.. -..|+| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+
T Consensus 321 ~~~~--~~~------~~l~~~~~~----~Gv~-~~Ri~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm-- 383 (468)
T PF13844_consen 321 RFPA--SGE------ARLRRRFAA----HGVD-PDRIIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM-- 383 (468)
T ss_dssp ETST--THH------HHHHHHHHH----TTS--GGGEEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH--
T ss_pred eCCH--HHH------HHHHHHHHH----cCCC-hhhEEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc--
Confidence 5442 111 233333333 2322 235775 566788999999999999999987777 4667999998
Q ss_pred CCCceEEEeCCCCc-c-----ccc---CCceEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHhhhhhh---hcCCHHHHH
Q 002314 485 LKKGVLILSEFAGA-A-----QSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV---TTHTAQEWA 552 (937)
Q Consensus 485 ~~~g~lVlSe~aG~-~-----~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~V---~~~~~~~W~ 552 (937)
|++|+|--+-. + ..| |-.-++. .|.++..+.-.++.+++ +.++...++.++.+ --++...|+
T Consensus 384 ---GVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--~s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~a 457 (468)
T PF13844_consen 384 ---GVPVVTLPGETMASRVGASILRALGLPELIA--DSEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFA 457 (468)
T ss_dssp ---T--EEB---SSGGGSHHHHHHHHHT-GGGB---SSHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHH
T ss_pred ---CCCEEeccCCCchhHHHHHHHHHcCCchhcC--CCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHH
Confidence 77787732211 1 111 3222222 35555555444444543 34444444444443 226788888
Q ss_pred HHHHHHHHH
Q 002314 553 ETFVSELND 561 (937)
Q Consensus 553 ~~fl~~l~~ 561 (937)
++|-..+..
T Consensus 458 r~lE~a~~~ 466 (468)
T PF13844_consen 458 RNLEAAYRQ 466 (468)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877666554
No 180
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=93.91 E-value=0.058 Score=54.56 Aligned_cols=53 Identities=15% Similarity=0.260 Sum_probs=33.2
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG 647 (937)
|+.+||+||||+.... +..-.+-+.+-.-.++.+.++|++|.+ .|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 5789999999996521 000001111223456789999999987 5999999884
No 181
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.75 E-value=0.1 Score=53.65 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=39.4
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
.|+++||.||||...... ...... ...+-|.+.++|++|.+ .|..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~---~~~~~~--~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG---YVKSPD--EWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCcc---ccCCHH--HeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 589999999999755321 122222 34567899999999987 589999999876
No 182
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.68 E-value=0.18 Score=51.35 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=48.3
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-eEEEEcCCC-------hhhHHHHh
Q 002314 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 657 (937)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~IvSGR~-------~~~L~~~~ 657 (937)
.++...|.|+||.|.||++.. ...++++..+.++++.+.-+. .|+|+|-.. ...++.+-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~-------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY-------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC-------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 566889999999999999873 456899999999999875332 599999863 44454444
Q ss_pred cccCce
Q 002314 658 QEYNLW 663 (937)
Q Consensus 658 ~~~~l~ 663 (937)
..+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 444544
No 183
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.61 E-value=0.068 Score=49.77 Aligned_cols=54 Identities=15% Similarity=0.260 Sum_probs=38.3
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCCh---hhHHHHhcccCce
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKNFQEYNLW 663 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~~~~~~~~l~ 663 (937)
|+||+||||... ..+-|.+.++|++|.+ .|..++++|-.+. ..+.+.+..+++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999964 2355788999999987 4899999987654 4444445444444
No 184
>PTZ00445 p36-lilke protein; Provisional
Probab=93.58 E-value=0.2 Score=52.54 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=49.7
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCC----CCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChh
Q 002314 578 READSIERYLRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (937)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~----~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 651 (937)
..+.+.+.++....|+|++|+|-||++.. .+|. .........++|+.+..+.+|.+ .+..|+|||=.+..
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchh
Confidence 35567778889999999999999999821 1110 00011223478999999999986 59999999966543
No 185
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=93.57 E-value=0.12 Score=57.30 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=49.2
Q ss_pred CCeEEEEecCcccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 590 NNRLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~-P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
+.+++++|+||||...... | .+.....+..+.+.+.++|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSP---YDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCc---cchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 4578999999999986431 0 001111245678899999999987 59999999999998887666554
No 186
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.17 E-value=0.14 Score=58.34 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=40.4
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
+++++|||.||||....... ...+.+ ....+-|.+.+.|..|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~~-~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDSL-DKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccCc-ccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 46899999999999863210 011111 346788999999999975 68999999984
No 187
>PRK06769 hypothetical protein; Validated
Probab=93.16 E-value=0.11 Score=53.30 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=39.2
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~ 649 (937)
+..|+|++|-||||.....-. . .....+-|.+.++|++|.+ .|..++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~------~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH------Y-PGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC------C-HHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 357999999999997552100 0 0244567899999999987 589999999854
No 188
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.06 E-value=0.14 Score=55.13 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=42.1
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH--HHhcccC
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYN 661 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~--~~~~~~~ 661 (937)
+.++++||+||||... ..+-|.+.++|++|.+ .|..++|+|..+....+ +.+..++
T Consensus 7 ~~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred cCCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 4578999999999965 2356899999999987 59999999876654333 4555443
No 189
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=93.02 E-value=0.6 Score=56.80 Aligned_cols=67 Identities=16% Similarity=0.322 Sum_probs=51.9
Q ss_pred HHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCC-CeEEEEcCCChhhHHHHhcccCc
Q 002314 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 584 ~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g-~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
+.+.....+.+++..||+++.... ....+-|++.++|++|.+ .| ..++|+||.+....+.....+++
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 345566678899999998876421 234577899999999986 47 99999999999988887776544
No 190
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=92.98 E-value=0.31 Score=49.84 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=30.3
Q ss_pred hhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
+++.+.|+.+.+ .+..|+|+||-....++.++..+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 577899999876 4999999999988888888765544
No 191
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=92.88 E-value=21 Score=40.80 Aligned_cols=243 Identities=15% Similarity=0.114 Sum_probs=117.5
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEccCCCchhhhccCccchHHHHhhh--cCCEEEEeCHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH~PfPs~e~fr~lp~r~eil~~ll--~aDlIgF~t~~~~~~Fl~~~~r 308 (937)
.+|+|.||.=-.-.+...+.....++||++. |-=--+.|.. .|.-+|+.|-+. -||+-.--+..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 4589999875555555555555568888763 3211111211 123334433332 356666666666666554
Q ss_pred HhCcccCCCceeeCCeeeEEEEE-ecccChhhhhhhhcCCchHHHHHHHHHHhcCCcEEE-EEecccc---cCCHHHHHH
Q 002314 309 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVML-GVDRLDM---IKGIPQKLL 383 (937)
Q Consensus 309 ~lg~~~~~~~v~~~gr~~~i~v~-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIL-~VdRld~---~KGi~~~l~ 383 (937)
.|.+ ..+|.++ ..++|.-........+... ...+... ..++++| ..=|... .......+.
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~ 204 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKYK--NSGILQD-APKPYILVTLHPVTNEDNPERLEQILE 204 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-HH--HHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhhh--hHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHH
Confidence 2321 2233333 3456643222111111110 1122112 3444444 4434433 344667778
Q ss_pred HHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHccEE
Q 002314 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (937)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~ 463 (937)
+++.+.+. +++ .+|....++ + .....+.+...+++ .+++ ...++..++..+++.|+++
T Consensus 205 ~l~~L~~~-~~~----~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~~-~~~l~~~~~l~ll~~a~~v 262 (346)
T PF02350_consen 205 ALKALAER-QNV----PVIFPLHNN----P---RGSDIIIEKLKKYD---------NVRL-IEPLGYEEYLSLLKNADLV 262 (346)
T ss_dssp HHHHHHHH-TTE----EEEEE--S-----H---HHHHHHHHHHTT-T---------TEEE-E----HHHHHHHHHHESEE
T ss_pred HHHHHHhc-CCC----cEEEEecCC----c---hHHHHHHHHhcccC---------CEEE-ECCCCHHHHHHHHhcceEE
Confidence 88887776 443 344343211 2 22333333332221 3554 5789999999999999999
Q ss_pred EECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHHcC
Q 002314 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 527 (937)
Q Consensus 464 vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m 527 (937)
|--|- |+ ..||.+++ .|+|.=...|-.++. ....++|. .|.+++.++|.+++..
T Consensus 263 vgdSs----GI-~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 263 VGDSS----GI-QEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EESSH----HH-HHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EEcCc----cH-HHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 87773 22 34999984 455555556666664 23455576 7999999999999975
No 192
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.45 E-value=0.14 Score=54.78 Aligned_cols=70 Identities=14% Similarity=0.061 Sum_probs=47.5
Q ss_pred CCeEEEEecCcccCCCCCCCC--CCC----------ccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhh---HH
Q 002314 590 NNRLLILGFNATLTEPVDTPG--RRG----------DQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 654 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~--~~~----------~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~---L~ 654 (937)
.+-+++||+|-|+++..+--. ..+ .-+.+..+..-|.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 457899999999998542000 000 01122456677899999999987 699999999999655 44
Q ss_pred HHhccc
Q 002314 655 KNFQEY 660 (937)
Q Consensus 655 ~~~~~~ 660 (937)
+++...
T Consensus 155 ~nL~~~ 160 (229)
T TIGR01675 155 DNLINA 160 (229)
T ss_pred HHHHHc
Confidence 555443
No 193
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.44 E-value=0.22 Score=59.69 Aligned_cols=58 Identities=10% Similarity=0.206 Sum_probs=39.8
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccc-CCChhHHHHHHHhhcCCCCeEEEEcCCCh
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~-~~~~~~~~~L~~L~~d~g~~V~IvSGR~~ 650 (937)
...|++|||+||||..... +.....-+ .+- .+-|.+.+.|++|.+ .|..++|+|..+-
T Consensus 166 ~~~Kia~fD~DGTLi~t~s--g~~~~~~~-~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKS--GKVFPKGP-DDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCC--CccCCCCH-HHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 4568999999999996421 00000001 222 257899999999987 5999999998655
No 194
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.32 E-value=0.18 Score=54.22 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.5
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEc---CCChhhHHHHhcc
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 659 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~~~~ 659 (937)
++||+||||.+.. .+-+.+.++|+.|.+ .+.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5789999999863 134588999999986 588999998 9999988777666
No 195
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=92.30 E-value=0.16 Score=53.70 Aligned_cols=38 Identities=3% Similarity=-0.258 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-+...++.+++.++ .+++.+++||| ..+|.++-+.++-
T Consensus 149 p~~~~~~~~~~~~~------~~~~~~~~igD-s~~Di~aA~~aG~ 186 (222)
T PRK10826 149 PHPEVYLNCAAKLG------VDPLTCVALED-SFNGMIAAKAARM 186 (222)
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEEcC-ChhhHHHHHHcCC
Confidence 35568899999998 56899999999 9999999998875
No 196
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.07 E-value=0.17 Score=55.50 Aligned_cols=73 Identities=12% Similarity=0.169 Sum_probs=47.7
Q ss_pred cCCeEEEEecCcccCCCCCCC-----CCC-C--cc----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH--
Q 002314 589 SNNRLLILGFNATLTEPVDTP-----GRR-G--DQ----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD-- 654 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P-----~~~-~--~~----~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~-- 654 (937)
.++.+|+||+|+|+++..+-- ... . .. .......+-|.+.+.|+.|.+ .|..++++|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 456799999999999764210 000 0 00 111234566889999999987 59999999999855443
Q ss_pred -HHhcccCc
Q 002314 655 -KNFQEYNL 662 (937)
Q Consensus 655 -~~~~~~~l 662 (937)
.++...++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55555444
No 197
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=91.91 E-value=14 Score=42.53 Aligned_cols=72 Identities=14% Similarity=0.148 Sum_probs=47.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCc----cccc--CCceEEECCC--CHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL--GAGAILVNPW--NIT 515 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~----~~~l--g~~gllVnP~--D~~ 515 (937)
+.++++..+ +|..||++| .+-|+| +..|+++++ .|+|+--..+= +..+ ...|+.+++. +.+
T Consensus 292 ~~~~~p~~~---ll~~~d~~I---~hgG~~-t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHDW---LLPRCAAVV---HHGGAG-TTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHHH---Hhhhhheee---ecCCch-hHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 456677554 578899999 456764 569999994 56666544431 2122 1235555554 689
Q ss_pred HHHHHHHHHHc
Q 002314 516 EVANAIARALN 526 (937)
Q Consensus 516 ~lA~aI~~aL~ 526 (937)
+++++|.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
No 198
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.83 E-value=0.35 Score=48.13 Aligned_cols=70 Identities=17% Similarity=0.233 Sum_probs=48.7
Q ss_pred CCeEEEEecCcccCCCCC--CCCCC-Ccc-c--------cccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh
Q 002314 590 NNRLLILGFNATLTEPVD--TPGRR-GDQ-I--------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~--~P~~~-~~~-~--------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~ 657 (937)
++.++++|+||||+.... .++.. ..+ + ......+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 357899999999998632 11110 100 0 01233567899999999974 6999999999999988877
Q ss_pred cccC
Q 002314 658 QEYN 661 (937)
Q Consensus 658 ~~~~ 661 (937)
..++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 6653
No 199
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=91.73 E-value=6.8 Score=44.58 Aligned_cols=195 Identities=14% Similarity=0.157 Sum_probs=103.2
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHh
Q 002314 578 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (937)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~ 657 (937)
|+.++..--...+-+|+-||=|+||-++.. .-..+..++.-|-+|-+ .|..|+|||.=.+...+++.
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 444444433344779999999999999853 12234455555556655 49999999988876655443
Q ss_pred ccc-------------------Cc-eEEeeCceEEEec-----------CCeeeeccccccChhHHH-HHHH-------H
Q 002314 658 QEY-------------------NL-WLAAENGMFLRCT-----------TGKWMTTMPEHLNMEWVD-SLKH-------V 698 (937)
Q Consensus 658 ~~~-------------------~l-~liaenG~~ir~~-----------~~~w~~~~~~~~~~~w~~-~v~~-------i 698 (937)
..+ ++ .+-||.-+.++.. .+.|... .-..|.+ .+.+ .
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~----~m~~W~~~dI~~lLD~AE~~ 276 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP----EMKTWSEEDITELLDIAEAA 276 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc----cccCcCHHHHHHHHHHHHHH
Confidence 321 11 2344444445432 1245321 1123322 2333 3
Q ss_pred HHHHHhc--CCCceeeeecceEEEEeeccChhhhHHHHHH----HHHHHhcCC--CCCCCeEEEEcCe--EEEEEECCCC
Q 002314 699 FEYFTER--TPRSHFEQRETSLVWNYKYADVEFGRIQARD----MLQHLWTGP--ISNASVEVVQGSK--SVEVRAVGVT 768 (937)
Q Consensus 699 l~~~~~~--~~Gs~iE~K~~sl~~hyr~ad~e~~~~~a~e----l~~~L~~~~--~~~~~v~v~~Gk~--~vEV~p~gvn 768 (937)
++....+ .| ..|-.|+-++-+--.. ...+...+.+| +...| +.. ...-++....|.. +|+| -|
T Consensus 277 L~~~~~~l~Lp-a~IiRK~RAVGivP~~-~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----Gd 349 (408)
T PF06437_consen 277 LRDCVKRLNLP-ATIIRKERAVGIVPKP-GVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----GD 349 (408)
T ss_pred HHHHHHHcCCC-eeEEeecceeeEecCC-CCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----CC
Confidence 3333322 34 4455666555443211 11111122222 23333 221 1223566666643 5555 37
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEec
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD 798 (937)
|.-+|+.+.+.+. ..+.+.+.+++-+||
T Consensus 350 Ks~GV~~lQ~y~~--~~~~i~~~~tLHVGD 377 (408)
T PF06437_consen 350 KSLGVRALQKYFD--PEGGIKPSETLHVGD 377 (408)
T ss_pred cHHhHHHHHHHHH--hccCCCccceeeehh
Confidence 9999999999882 112267899999999
No 200
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=91.63 E-value=0.33 Score=53.52 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
..++..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 198 ~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG 232 (273)
T PRK13225 198 RRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVG 232 (273)
T ss_pred HHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCC
Confidence 356788888887 45789999999 888877666553
No 201
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=91.48 E-value=0.16 Score=53.74 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=25.4
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
..+.|.+.+.|+.|.+ .|..++|+||.....++.++..
T Consensus 73 ~~l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~ 110 (219)
T PRK09552 73 AEIREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQG 110 (219)
T ss_pred CCcCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHH
Confidence 3456667777777665 4777777777776666666655
No 202
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=91.35 E-value=0.13 Score=52.00 Aligned_cols=41 Identities=17% Similarity=0.312 Sum_probs=35.4
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
.+.+.+|+.+++.+++..+ ++.+.+++||| +.||.+|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHhcC
Confidence 4567899999999998876 46788999999 99999999864
No 203
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=91.19 E-value=0.35 Score=50.32 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=24.1
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
+-|.+.+.|..|.+ . ..++|+||.....++.++..+
T Consensus 69 ~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 69 PLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 45667777777765 3 677777777777776666553
No 204
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=91.08 E-value=0.32 Score=51.09 Aligned_cols=37 Identities=11% Similarity=-0.037 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|...+++++++++ .+++.+++||| ..+|..+-+.++-
T Consensus 140 ~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~ 176 (214)
T PRK13288 140 DPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGT 176 (214)
T ss_pred CcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 4456667888877 45789999999 9999988877753
No 205
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=90.99 E-value=6.6 Score=45.71 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=77.7
Q ss_pred EEEEec-ccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhc---------ccCC
Q 002314 366 MLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING---------RFGT 435 (937)
Q Consensus 366 IL~VdR-ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~---------~~g~ 435 (937)
|+.-.| =+-.++++.+++|++.+.++ |+ +.++....+. .++..+++.+.+. .++. .|..
T Consensus 210 lLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~ 278 (396)
T TIGR03492 210 LLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQK 278 (396)
T ss_pred EECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhcc
Confidence 344556 45667889999999998655 54 3354443232 1223333332211 0100 0000
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCc------ccc---cCCce
Q 002314 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA------AQS---LGAGA 506 (937)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~------~~~---lg~~g 506 (937)
..+.++ ....+...+|+.||++|..| |.+..|+++++ .|.|+--+.+- .+. +-..+
T Consensus 279 ---~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~ 343 (396)
T TIGR03492 279 ---GTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGS 343 (396)
T ss_pred ---CceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCE
Confidence 012221 12367899999999999986 35669999985 45555432121 111 10245
Q ss_pred EEECCCCHHHHHHHHHHHHcCC
Q 002314 507 ILVNPWNITEVANAIARALNMS 528 (937)
Q Consensus 507 llVnP~D~~~lA~aI~~aL~m~ 528 (937)
+.+...+.+.++++|.++|+++
T Consensus 344 ~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 344 VFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred EecCCCCHHHHHHHHHHHHcCH
Confidence 5555678899999999999864
No 206
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=90.95 E-value=0.52 Score=48.41 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=48.9
Q ss_pred CeEEEEecCcccCCCCCC-----CCCCCcccc-------ccccCCChhHHHHHHHhhcCCCCeEEEEcCC-ChhhHHHHh
Q 002314 591 NRLLILGFNATLTEPVDT-----PGRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 657 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~-----P~~~~~~~~-------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~~ 657 (937)
.||++||.|+||.+.... |.+..++.. .....+-|.+.++|+.|.+ .|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 479999999999975421 111111111 1234567899999999987 59999999998 777777766
Q ss_pred cccC
Q 002314 658 QEYN 661 (937)
Q Consensus 658 ~~~~ 661 (937)
..++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 6544
No 207
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=90.59 E-value=0.16 Score=50.54 Aligned_cols=39 Identities=21% Similarity=0.092 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-+|-.|.+.|+++++ +.++++.|+|| |.+|.++|+.++-
T Consensus 82 ~dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGl 120 (170)
T COG1778 82 SDKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGL 120 (170)
T ss_pred HhHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCC
Confidence 389999999999998 56899999999 9999999999975
No 208
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=90.47 E-value=1.2 Score=53.98 Aligned_cols=63 Identities=16% Similarity=0.260 Sum_probs=47.3
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-eEEEEcCCChhhHHHHhcccCc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~IvSGR~~~~L~~~~~~~~l 662 (937)
......+++-.||++..... ....+-+++.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 339 ~~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 339 SAGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred hCCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 34456677777888775421 134567899999999987 588 9999999999888888776554
No 209
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=90.39 E-value=22 Score=40.86 Aligned_cols=93 Identities=22% Similarity=0.216 Sum_probs=59.5
Q ss_pred HHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcc--cc------c--CCceEEECCCC--HHHHH
Q 002314 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L--GAGAILVNPWN--ITEVA 518 (937)
Q Consensus 451 ~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~--~~------l--g~~gllVnP~D--~~~lA 518 (937)
+++.++|++||+++.=+= ++++.|..|++ .|.|+=-+...+ ++ | -..|+.+.-.+ .+.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999986442 57889999995 455554444441 22 2 12466666555 88999
Q ss_pred HHHHHHHcCCHHHHHHHHH-hhhhhhhcCCHHHHHH
Q 002314 519 NAIARALNMSPEEREKRHW-HNFTHVTTHTAQEWAE 553 (937)
Q Consensus 519 ~aI~~aL~m~~~er~~r~~-~~~~~V~~~~~~~W~~ 553 (937)
+.|.++++.+ |+.+.|. +.+..-.......-++
T Consensus 316 ~~i~~l~~~~--~~l~~m~~~a~~~~~p~aa~~i~~ 349 (357)
T COG0707 316 ELILRLLSNP--EKLKAMAENAKKLGKPDAAERIAD 349 (357)
T ss_pred HHHHHHhcCH--HHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999863 4444444 4444434444344333
No 210
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=89.76 E-value=0.81 Score=50.09 Aligned_cols=19 Identities=11% Similarity=0.094 Sum_probs=16.1
Q ss_pred hcCCeEEEEecCcccCCCC
Q 002314 588 RSNNRLLILGFNATLTEPV 606 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~ 606 (937)
....++|+|||||||++..
T Consensus 21 ~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred cCCceEEEEeCCCceeCCc
Confidence 4567899999999999873
No 211
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.74 E-value=0.04 Score=59.14 Aligned_cols=85 Identities=8% Similarity=0.096 Sum_probs=51.2
Q ss_pred cCCeEEEEecCcccCCCCCC------------CCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHH
Q 002314 589 SNNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~------------P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 656 (937)
-+...++||+|+||++..+. |......+.......-|.+++.++.+.+ .|..|+++|||+-..-+.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 45678999999999864211 0000000001122445568899999987 5999999999997754444
Q ss_pred hccc-CceEEeeCceEEEe
Q 002314 657 FQEY-NLWLAAENGMFLRC 674 (937)
Q Consensus 657 ~~~~-~l~liaenG~~ir~ 674 (937)
...+ ..|+.+-.+.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 4433 23333445566664
No 212
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=89.69 E-value=0.54 Score=47.48 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=33.7
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.+.+.+.|+.|.+ .|..++|+||.....++.++..+++
T Consensus 73 ~~~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g~ 112 (177)
T TIGR01488 73 ALRPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLGI 112 (177)
T ss_pred CcCcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 456889999999876 5899999999999999988877654
No 213
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=88.95 E-value=0.52 Score=50.29 Aligned_cols=29 Identities=10% Similarity=-0.057 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHH
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDED 805 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEd 805 (937)
-.....++++++ .+++.+++||| ..+|..
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~ 180 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILD 180 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHH
Confidence 445677778777 46788999999 777643
No 214
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=88.73 E-value=31 Score=42.13 Aligned_cols=65 Identities=22% Similarity=0.241 Sum_probs=42.5
Q ss_pred HHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe-------------------CCCCccccc-CCceE--EE--
Q 002314 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-------------------EFAGAAQSL-GAGAI--LV-- 509 (937)
Q Consensus 454 ~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS-------------------e~aG~~~~l-g~~gl--lV-- 509 (937)
..++++||+++.+| |.+.+|++.++ .|.|+. .+.|....+ |..-+ ++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg 553 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG 553 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC
Confidence 68999999999999 79999999985 455543 222333223 22111 22
Q ss_pred -CCCCHHHHHHHHHHHHcCC
Q 002314 510 -NPWNITEVANAIARALNMS 528 (937)
Q Consensus 510 -nP~D~~~lA~aI~~aL~m~ 528 (937)
+-.+++.+|+++ +.|.++
T Consensus 554 Q~~~tpe~La~~l-~lL~d~ 572 (608)
T PRK01021 554 KKDFQPEEVAAAL-DILKTS 572 (608)
T ss_pred cccCCHHHHHHHH-HHhcCH
Confidence 345688888886 777655
No 215
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=88.32 E-value=0.7 Score=50.50 Aligned_cols=63 Identities=14% Similarity=0.156 Sum_probs=42.6
Q ss_pred CCeEEEEecCcccCCCCCCCC------------CCC-ccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhH
Q 002314 590 NNRLLILGFNATLTEPVDTPG------------RRG-DQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~------------~~~-~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 653 (937)
.+-+++||+|+|+++..+--. ... ..+....+..-|.+++..+.|.+ .|.+|+++|||+-..-
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r 175 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQ 175 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHH
Confidence 457899999999996432100 000 11112345667789999999986 6999999999986443
No 216
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=88.31 E-value=0.67 Score=46.65 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=38.7
Q ss_pred EEEEecCcccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhH
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L 653 (937)
++++|+|||++...- .++-.+- ......+.+.++.+++++ .|..++-+|+|+....
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa 57 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQA 57 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHH
Confidence 478999999997621 1110100 011567889999999986 6999999999997543
No 217
>PRK10671 copA copper exporting ATPase; Provisional
Probab=88.04 E-value=3 Score=53.41 Aligned_cols=69 Identities=14% Similarity=0.187 Sum_probs=49.1
Q ss_pred HHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 581 DSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 581 ~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.....+.....+.+++-.||+++..-. ..-.+-+...++|++|.+ .|.+++++||......+.....+
T Consensus 620 ~~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 620 AEITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHc
Confidence 334555666678888888998763211 112355778899999976 58999999999888887776654
Q ss_pred C
Q 002314 661 N 661 (937)
Q Consensus 661 ~ 661 (937)
+
T Consensus 688 g 688 (834)
T PRK10671 688 G 688 (834)
T ss_pred C
Confidence 4
No 218
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=88.01 E-value=3 Score=42.66 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=40.1
Q ss_pred cceEEEEeeccChhhhHHHHHHHHHHHhcCC-CCCCCeEEEEcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceE
Q 002314 715 ETSLVWNYKYADVEFGRIQARDMLQHLWTGP-ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYV 793 (937)
Q Consensus 715 ~~sl~~hyr~ad~e~~~~~a~el~~~L~~~~-~~~~~v~v~~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~v 793 (937)
+..++.--|...|+. |+++++.+ .-. .......+...-..+||.|. +|-.=.+.|.+..+ ++.+.+
T Consensus 61 gv~lavASRt~~P~~----A~~~L~~l-~i~~~~~~~~~~~~~F~~~eI~~g--sK~~Hf~~i~~~tg------I~y~eM 127 (169)
T PF12689_consen 61 GVKLAVASRTDEPDW----ARELLKLL-EIDDADGDGVPLIEYFDYLEIYPG--SKTTHFRRIHRKTG------IPYEEM 127 (169)
T ss_dssp T--EEEEE--S-HHH----HHHHHHHT-T-C----------CCECEEEESSS---HHHHHHHHHHHH---------GGGE
T ss_pred CCEEEEEECCCChHH----HHHHHHhc-CCCccccccccchhhcchhheecC--chHHHHHHHHHhcC------CChhHE
Confidence 344455445445554 46677666 211 01112222233346899885 99999999999988 789999
Q ss_pred EEEecCCCCcHH
Q 002314 794 LCIGHFLGKDED 805 (937)
Q Consensus 794 l~iGD~d~nDEd 805 (937)
++|=|+..|.++
T Consensus 128 lFFDDe~~N~~~ 139 (169)
T PF12689_consen 128 LFFDDESRNIEV 139 (169)
T ss_dssp EEEES-HHHHHH
T ss_pred EEecCchhccee
Confidence 999994444433
No 219
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=86.48 E-value=0.74 Score=48.58 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.4
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
..+.|.+.+.|+.|.+ .|..++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 4567788888988876 58999999999888888877654
No 220
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=86.35 E-value=1.6 Score=49.21 Aligned_cols=63 Identities=22% Similarity=0.315 Sum_probs=47.1
Q ss_pred CeEEEEecCcccCCCC--CCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 591 NRLLILGFNATLTEPV--DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~--~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
.|+|++|+|+||..-+ ++ +..+ + ....+.+.+.+.|++|.+ .|..++|+|..+...+...|..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~-g~~~--i--~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGED-GIDN--L--NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred eEEEEEcCCCCCCCCEEccC-Cccc--c--ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 5899999999999753 11 0000 0 011245789999999986 6999999999999999988876
No 221
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=86.28 E-value=1.3 Score=47.13 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=31.9
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
..+-+.+.++|..|.+ .+..++++|+.+...++..+...+
T Consensus 85 ~~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 85 LKPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 3567788899999986 468999999999888888776653
No 222
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=86.16 E-value=1 Score=45.89 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=30.2
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 764 p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+.|..|+..++.+++.. ++.+++||| +.||..|-+.+.
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~aa~~~d 182 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCPAKLSD 182 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-CcchhchHhcCC
Confidence 56778999888887642 467999999 999998877764
No 223
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=85.02 E-value=17 Score=41.85 Aligned_cols=99 Identities=11% Similarity=0.074 Sum_probs=59.9
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccc----cc--CCceEEECC--CCHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ----SL--GAGAILVNP--WNIT 515 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~----~l--g~~gllVnP--~D~~ 515 (937)
+.+++++. .++..||++|.. -|.| +..|+++++ .|+|+.-..+--. .+ ...|+.++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITH---GGMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 35777764 567899998854 4666 569999994 5666643332211 12 123555654 4678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhhhhhhh-cCCHHHHHHHH
Q 002314 516 EVANAIARALNMSPEEREKRHWHNFTHVT-THTAQEWAETF 555 (937)
Q Consensus 516 ~lA~aI~~aL~m~~~er~~r~~~~~~~V~-~~~~~~W~~~f 555 (937)
+++++|.++|..+ +.+++.+.+.+.+. .......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999865 33444444444443 33455555433
No 224
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=85.02 E-value=0.94 Score=46.71 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.8
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
.++||||-||||....++ ++.. ++-...+.++++|.+|.+ .+..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 579999999999865321 2221 455678899999999986 69999998853
No 225
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=84.84 E-value=16 Score=40.82 Aligned_cols=124 Identities=18% Similarity=0.175 Sum_probs=81.8
Q ss_pred cEEEEEe-cccccCCHHHHHHHHHHhHHhCcCccCcEEEEE-EEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 364 KVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 364 ~iIL~Vd-Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvq-i~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
++.+-|| .=|++-++.+.|+++.++... ++.++. .+.|+ ++ + ++.++|.+...+ .||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn-~---~Yi~~V~~~~~~---lF~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN-Q---AYIEEVRQAGLA---LFGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC-H---HHHHHHHHHHHH---hcCcc---cE
Confidence 3444444 668999999999988777543 233332 22232 22 3 456777766655 35532 45
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCC-CcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEE
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 509 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl-~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllV 509 (937)
..++..++.+|+.++++.+|+.++.-- ..|+|..++=.- . +.++++|+-.-.-..+-+-|+-|
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~-~----G~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQ-L----GKPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHH-C----CCcEEEecCCchHHHHHhCCCeE
Confidence 667899999999999999999999876 479998765432 2 46888887776666663344433
No 226
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=84.25 E-value=1.4 Score=50.76 Aligned_cols=18 Identities=11% Similarity=0.043 Sum_probs=15.4
Q ss_pred cCCeEEEEecCcccCCCC
Q 002314 589 SNNRLLILGFNATLTEPV 606 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~ 606 (937)
+..+.++||+||||++..
T Consensus 129 ~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred CCCCEEEEcCcCcceeCH
Confidence 467899999999999853
No 227
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=83.97 E-value=1.9 Score=48.72 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=35.6
Q ss_pred EEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcC---CCCeEEEEc---CCChhhHHHHh
Q 002314 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD---PKTTIVVLS---GSDRNVLDKNF 657 (937)
Q Consensus 593 LI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d---~g~~V~IvS---GR~~~~L~~~~ 657 (937)
.|+||+||||.... .+-+...++|+.|... -+..++++| |++...+.+.+
T Consensus 2 ~~ifD~DGvL~~g~---------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRGK---------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECCc---------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 58999999999752 2467899999999863 166666665 66666654433
No 228
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=83.87 E-value=1.1 Score=44.89 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=43.0
Q ss_pred eEEEEecCcccCCCCCCCCCCCcc-----ccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~-----~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
++++||+||||+.....+....+. .......+-|.+.+.|+.|+. ...|+|.|..+....+..+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 589999999999765432100000 011223456889999999965 6899999999988887777665
No 229
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=83.48 E-value=0.99 Score=46.52 Aligned_cols=39 Identities=18% Similarity=0.358 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
-+|+.+++.+++.++ .+++.+++||| +.+|.+|++.++.
T Consensus 146 ~~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~ 184 (201)
T TIGR01491 146 DNKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADI 184 (201)
T ss_pred ccHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCC
Confidence 479999999999887 46789999999 9999999999975
No 230
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=83.41 E-value=1.6 Score=45.91 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.|.+.+.|+.|.+. ..++|+||-....++.++..+++
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHHcCC
Confidence 5778888888888763 48888998888888877776554
No 231
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=82.72 E-value=1.4 Score=48.36 Aligned_cols=54 Identities=13% Similarity=0.252 Sum_probs=39.8
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCC---hhhHHHHhcc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKNFQE 659 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L~~~~~~ 659 (937)
+...++||+||||..- ..+=|...++|++|.+ .|.+++++|-.+ ...+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 3467999999999964 2345789999999987 589999987654 4444444443
No 232
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=82.56 E-value=2.6 Score=42.50 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=51.2
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccc---------------------cccccCCChhHHHHHHHhhcCCCCeEEEEc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------------------REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~---------------------~~~~~~~~~~~~~~L~~L~~d~g~~V~IvS 646 (937)
..++..++||+|.||+.....|....... ......+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 35677899999999998765542111000 00123456799999999984 68999999
Q ss_pred CCChhhHHHHhcccC
Q 002314 647 GSDRNVLDKNFQEYN 661 (937)
Q Consensus 647 GR~~~~L~~~~~~~~ 661 (937)
..+..-.+..+..++
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999988888777763
No 233
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=82.25 E-value=37 Score=38.92 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccc--hHHHHHHhhCCCCeEEEEE
Q 002314 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFL 262 (937)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~--llp~~Lr~~~~~~~I~~fl 262 (937)
...|...-+.+-+.+.. .+++|+|..=||.=+ .+.+.+|+..|++|+.++.
T Consensus 57 l~~~~~~~~~~~~~~~~-~~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi 109 (347)
T PRK14089 57 LPKLFFAKKAIKEMVEL-AKQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYI 109 (347)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE
Confidence 33444444444333222 356788888777633 4788999999999998865
No 234
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=81.74 E-value=9.9 Score=41.98 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=57.7
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (937)
.+++++..|-.|+.+.....++|+..+ .++++ +..|.++.. +.+ +++++++.. + + .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~----~~l~~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNL----DELKKFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCH----HHHHHHHHh-C---C-----CE
Confidence 357899999999988777888887654 22332 333443332 222 334444432 1 1 23
Q ss_pred EEeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhc
Q 002314 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (937)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~ 483 (937)
.. .+ ..+++..+|..||+++.. -|.++.|+++|+
T Consensus 227 ~~-~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g 260 (279)
T TIGR03590 227 IL-FI--DVENMAELMNEADLAIGA-----AGSTSWERCCLG 260 (279)
T ss_pred EE-Ee--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcC
Confidence 32 23 347899999999999984 458999999995
No 235
>PRK08238 hypothetical protein; Validated
Probab=81.68 E-value=2.9 Score=49.83 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=37.4
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc--eEEeeCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 669 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l--~liaenG 669 (937)
.+.+++.+.|+++.+ .|.+++|+|+.+...++.....+++ .++|.++
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 356899999999986 6999999999999999888877653 3555544
No 236
>PLN02940 riboflavin kinase
Probab=80.67 E-value=2.2 Score=49.41 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=29.9
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
.+-+.+.++|+.|.+ .+..++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 456778889999986 599999999999888876665
No 237
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=80.45 E-value=3.6 Score=43.27 Aligned_cols=37 Identities=11% Similarity=-0.027 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|..+++.++++++ .+++.+++||| ..+|.++.+.++-
T Consensus 151 ~~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~a~~~g~ 187 (226)
T PRK13222 151 DPAPLLLACEKLG------LDPEEMLFVGD-SRNDIQAARAAGC 187 (226)
T ss_pred ChHHHHHHHHHcC------CChhheEEECC-CHHHHHHHHHCCC
Confidence 5778999999988 46789999999 9999999988864
No 238
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=80.39 E-value=1.6 Score=45.24 Aligned_cols=41 Identities=20% Similarity=0.149 Sum_probs=35.7
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+-.|..+++.++++.+ ++.+.++++|| +.+|.+|++.++.
T Consensus 152 ~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~~~~a~~ 192 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPLLSLVGH 192 (202)
T ss_pred CChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHHHHhCCC
Confidence 45679999999999877 45788999999 9999999999976
No 239
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=79.97 E-value=2.8 Score=43.43 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=21.6
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChh
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~ 651 (937)
..|-|.+.++|++|.+ .|..++++|+|+..
T Consensus 72 l~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 4577889999999996 57788888888754
No 240
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=79.73 E-value=3.5 Score=43.14 Aligned_cols=62 Identities=21% Similarity=0.286 Sum_probs=45.5
Q ss_pred cCCeEEEEecCcccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 589 SNNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~-~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
..+++++||+|+||+.... .+. .....-|.+.+-|+.+.+ ...|+|=|..+..-++..+..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~--------~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAET--------GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCC--------ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHHh
Confidence 4668999999999997521 110 123345789999999886 7899999998887777766543
No 241
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=78.94 E-value=24 Score=45.58 Aligned_cols=71 Identities=11% Similarity=0.214 Sum_probs=51.4
Q ss_pred HHHHHHHHhcCCeEEEEecCc-----ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH
Q 002314 580 ADSIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (937)
Q Consensus 580 ~~~~~~y~~s~~rLI~lD~DG-----TL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 654 (937)
......|.....|.+++=+++ |++.... ..-.+-+++.++|++|.+ .|.+|+++||-......
T Consensus 492 ~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~ 559 (884)
T TIGR01522 492 QEEAAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAV 559 (884)
T ss_pred HHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHH
Confidence 344556777777888887776 4333211 112366899999999986 69999999999999998
Q ss_pred HHhcccCc
Q 002314 655 KNFQEYNL 662 (937)
Q Consensus 655 ~~~~~~~l 662 (937)
.....+++
T Consensus 560 ~ia~~~Gi 567 (884)
T TIGR01522 560 SIARRLGM 567 (884)
T ss_pred HHHHHcCC
Confidence 88776553
No 242
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=78.06 E-value=1.4e+02 Score=34.56 Aligned_cols=135 Identities=19% Similarity=0.252 Sum_probs=81.9
Q ss_pred cEEEEEeccccc-CCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 364 KVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 364 ~iIL~VdRld~~-KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
.+++..=|-... +++...+.|+.++++++|+.. +| . |.--. +. +++++ +.+++.. ..|+
T Consensus 206 ~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi-y--p~H~~-~~-------v~e~~---~~~L~~~--~~v~ 265 (383)
T COG0381 206 YILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI-Y--PVHPR-PR-------VRELV---LKRLKNV--ERVK 265 (383)
T ss_pred EEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE-E--eCCCC-hh-------hhHHH---HHHhCCC--CcEE
Confidence 445566676555 999999999999999998753 22 2 22111 22 22222 1122221 1355
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCc-eEEEeCCCCcccccCC-ceEEECCCCHHHHHHH
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG-VLILSEFAGAAQSLGA-GAILVNPWNITEVANA 520 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g-~lVlSe~aG~~~~lg~-~gllVnP~D~~~lA~a 520 (937)
+...+.+.+...|+..|-+.+--| |=.--||-.-+ . ++++=+.+-=.+-+.. +.++|+. |.+.+.++
T Consensus 266 -li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg----~Pvl~lR~~TERPE~v~agt~~lvg~-~~~~i~~~ 334 (383)
T COG0381 266 -LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG----KPVLVLRDTTERPEGVEAGTNILVGT-DEENILDA 334 (383)
T ss_pred -EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC----CcEEeeccCCCCccceecCceEEeCc-cHHHHHHH
Confidence 457889999999999996666544 22345777763 2 3333333333333422 3456654 78999999
Q ss_pred HHHHHcCCH
Q 002314 521 IARALNMSP 529 (937)
Q Consensus 521 I~~aL~m~~ 529 (937)
+.++++++.
T Consensus 335 ~~~ll~~~~ 343 (383)
T COG0381 335 ATELLEDEE 343 (383)
T ss_pred HHHHhhChH
Confidence 999999763
No 243
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=77.16 E-value=5.6 Score=42.36 Aligned_cols=37 Identities=11% Similarity=-0.107 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+-..+.+++++++ ++++++++||| ..+|..+-+.++-
T Consensus 153 ~p~~~~~~~~~l~------~~p~~~l~IGD-s~~Di~aA~~aG~ 189 (229)
T PRK13226 153 HPLPLLVAAERIG------VAPTDCVYVGD-DERDILAARAAGM 189 (229)
T ss_pred CHHHHHHHHHHhC------CChhhEEEeCC-CHHHHHHHHHCCC
Confidence 4566888999988 56899999999 9999988877753
No 244
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=77.01 E-value=4.8 Score=40.72 Aligned_cols=69 Identities=14% Similarity=0.217 Sum_probs=47.8
Q ss_pred CeEEEEecCcccCCCCCCCCC-CCc---ccc------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 591 NRLLILGFNATLTEPVDTPGR-RGD---QIR------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~-~~~---~~~------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
++.++||+|+||+.....|.. ..+ .++ ..-...-|.+.+.|..|.+ ...++|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 357999999999976554421 111 011 1123456789999999986 4899999998888888777765
Q ss_pred C
Q 002314 661 N 661 (937)
Q Consensus 661 ~ 661 (937)
+
T Consensus 79 d 79 (162)
T TIGR02251 79 D 79 (162)
T ss_pred C
Confidence 3
No 245
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=76.99 E-value=5.6 Score=43.86 Aligned_cols=22 Identities=14% Similarity=0.382 Sum_probs=18.8
Q ss_pred CccceeeCCHHHHHHHHHHhhh
Q 002314 904 TNARFLLQSSDEVVSFLKKLAD 925 (937)
Q Consensus 904 t~A~y~l~~~~~V~~~L~~La~ 925 (937)
..|.|.++++.++..++.+|..
T Consensus 251 ~~ad~~i~~~~eL~~~~~~~~~ 272 (273)
T PRK13225 251 ACPDWLLETPSDLLQAVTQLMR 272 (273)
T ss_pred CCCCEEECCHHHHHHHHHHHhc
Confidence 4689999999999999988753
No 246
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.26 E-value=5 Score=45.64 Aligned_cols=117 Identities=15% Similarity=0.208 Sum_probs=79.4
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC---cC---CChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCH
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLR---DG---MNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI 514 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~---EG---~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~ 514 (937)
+.++....+.......|+.-|+++.=+.. ++ ++.-.+|+++|+ |+++.+-..+.-..++.+--+|--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEEecCH
Confidence 33333333446667777777777754432 33 388899999994 777766555555555443333445799
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhhhhh-hcCCHHHHHHHHHHHHHHh
Q 002314 515 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~~ 562 (937)
.++.+.|..++.-+ +||++..+.+++.| ..|+-..=+..++..+...
T Consensus 315 kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 315 KDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999999999865 58888888888776 5577777777777766653
No 247
>PRK14986 glycogen phosphorylase; Provisional
Probab=75.72 E-value=59 Score=41.19 Aligned_cols=150 Identities=11% Similarity=0.136 Sum_probs=101.4
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHhH--HhCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
+..+++++-|+..-|--.. +|..++++. ..+|+.. ..+++|..|....++... ..+-+.|..++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMA-KHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhccChhhcC
Confidence 3456778999998887666 777766663 3456421 236777777665555432 4566677777877775212223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----CCceEEEC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g~~gllVn 510 (937)
...|+|+. ..+-.--..++.+|||...+|+ .|.=|.--+=||.- |+|-+|..=|+..++ +++++++-
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 34688764 4566666778999999999998 57777776777764 899999888977655 46788886
Q ss_pred CCCHHHHHH
Q 002314 511 PWNITEVAN 519 (937)
Q Consensus 511 P~D~~~lA~ 519 (937)
. +.+++++
T Consensus 695 ~-~~~ev~~ 702 (815)
T PRK14986 695 N-TAEEVEA 702 (815)
T ss_pred C-CHHHHHH
Confidence 5 5666554
No 248
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=75.28 E-value=1.7 Score=44.47 Aligned_cols=36 Identities=3% Similarity=-0.204 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+-..+..++++++ .+++.+++||| ..+|.+.=+.++
T Consensus 144 ~p~~~~~~~~~~~------~~~~~~l~igD-s~~di~aA~~aG 179 (188)
T PRK10725 144 APDTFLRCAQLMG------VQPTQCVVFED-ADFGIQAARAAG 179 (188)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEec-cHhhHHHHHHCC
Confidence 5567888999988 45789999999 888876554443
No 249
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=75.05 E-value=4.5 Score=42.39 Aligned_cols=19 Identities=11% Similarity=0.476 Sum_probs=15.8
Q ss_pred ccceeeCCHHHHHHHHHHh
Q 002314 905 NARFLLQSSDEVVSFLKKL 923 (937)
Q Consensus 905 ~A~y~l~~~~~V~~~L~~L 923 (937)
.|.|.+++..++..++..+
T Consensus 195 ~~~~~i~~~~~l~~~i~~~ 213 (214)
T PRK13288 195 KPDFMLDKMSDLLAIVGDM 213 (214)
T ss_pred CcCEEECCHHHHHHHHhhc
Confidence 5889999999999887653
No 250
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=73.66 E-value=6.8 Score=42.21 Aligned_cols=45 Identities=22% Similarity=0.223 Sum_probs=33.9
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
-|.+.-||..++.+++... ....+.+.|+|||| +.||.-.-..++
T Consensus 145 C~~NmCK~~il~~~~~~~~---~~g~~~~rviYiGD-G~nD~Cp~~~L~ 189 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQA---QRGVPYDRVIYIGD-GRNDFCPALRLR 189 (234)
T ss_pred CCCccchHHHHHHHHHHHh---hcCCCcceEEEECC-CCCCcCcccccC
Confidence 3778899999999998742 11146789999999 999976555443
No 251
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=72.87 E-value=2 Score=47.74 Aligned_cols=36 Identities=0% Similarity=-0.204 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+...+..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 204 ~p~~~~~a~~~~~------~~p~~~l~IGD-s~~Di~aA~~aG 239 (286)
T PLN02779 204 DPDIYNLAAETLG------VDPSRCVVVED-SVIGLQAAKAAG 239 (286)
T ss_pred CHHHHHHHHHHhC------cChHHEEEEeC-CHHhHHHHHHcC
Confidence 3557888899988 46789999999 999888776664
No 252
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=72.36 E-value=7.8 Score=40.26 Aligned_cols=36 Identities=8% Similarity=-0.030 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
|...+..+++.++ ++++.+++||| +.+|..+=+.++
T Consensus 133 ~~~~~~~~~~~~~------~~~~~~l~igD-~~~Di~aA~~~G 168 (205)
T TIGR01454 133 APDIVREALRLLD------VPPEDAVMVGD-AVTDLASARAAG 168 (205)
T ss_pred ChHHHHHHHHHcC------CChhheEEEcC-CHHHHHHHHHcC
Confidence 5677888899887 46789999999 888877766664
No 253
>PRK11590 hypothetical protein; Provisional
Probab=72.19 E-value=2 Score=45.20 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=27.0
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|-.|-..++..+ + .+.+...|-|| +.+|.+|++.+..
T Consensus 160 ~g~~K~~~l~~~~---~------~~~~~~~aY~D-s~~D~pmL~~a~~ 197 (211)
T PRK11590 160 LGHEKVAQLERKI---G------TPLRLYSGYSD-SKQDNPLLYFCQH 197 (211)
T ss_pred CChHHHHHHHHHh---C------CCcceEEEecC-CcccHHHHHhCCC
Confidence 3445655555443 3 23556689999 9999999999976
No 254
>PHA02597 30.2 hypothetical protein; Provisional
Probab=71.93 E-value=1.9 Score=44.61 Aligned_cols=33 Identities=12% Similarity=-0.052 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
|-..+..+++.++ ++.+++||| ..+|..+=+.+
T Consensus 132 kp~~~~~a~~~~~--------~~~~v~vgD-s~~di~aA~~a 164 (197)
T PHA02597 132 KEKLFIKAKEKYG--------DRVVCFVDD-LAHNLDAAHEA 164 (197)
T ss_pred cHHHHHHHHHHhC--------CCcEEEeCC-CHHHHHHHHHH
Confidence 5677888888875 477899999 88885554443
No 255
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=71.59 E-value=6 Score=41.16 Aligned_cols=37 Identities=8% Similarity=-0.066 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+-.++..++++++ .+++.+++||| ..+|..+-+.++-
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~~~igD-s~~d~~aa~~aG~ 179 (213)
T TIGR01449 143 HPDPLLLAAERLG------VAPQQMVYVGD-SRVDIQAARAAGC 179 (213)
T ss_pred ChHHHHHHHHHcC------CChhHeEEeCC-CHHHHHHHHHCCC
Confidence 4568889999988 46788999999 9999999888764
No 256
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=71.55 E-value=28 Score=42.55 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=36.4
Q ss_pred EEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCCCCC
Q 002314 762 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTD 828 (937)
Q Consensus 762 V~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~~~~ 828 (937)
+|-.-.-|+..++-|-++- ...|.|||| +.||..|+++++. |+|+.-.++.|
T Consensus 762 CRctPtQKA~v~~llq~~t---------~krvc~IGD-GGNDVsMIq~A~~-----GiGI~gkEGkQ 813 (1051)
T KOG0210|consen 762 CRCTPTQKAQVVRLLQKKT---------GKRVCAIGD-GGNDVSMIQAADV-----GIGIVGKEGKQ 813 (1051)
T ss_pred EecChhHHHHHHHHHHHhh---------CceEEEEcC-CCccchheeeccc-----ceeeecccccc
Confidence 4555567888776665543 357899999 9999999999986 45555444433
No 257
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=71.16 E-value=14 Score=37.87 Aligned_cols=49 Identities=20% Similarity=0.056 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCcccchHHHHHHhhCCCCeEEE
Q 002314 210 QFAAYIKANQMFADVVNKHYK---DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW 260 (937)
Q Consensus 210 ~w~~Y~~vN~~fA~~i~~~~~---~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~ 260 (937)
.|+.=...=+..++.+.+..+ .+|+|..| +-+.-+-+||...|+++++.
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~ 93 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIG 93 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEE
Confidence 355444445555555555433 46999999 78888889999999999764
No 258
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=71.09 E-value=2.2 Score=43.28 Aligned_cols=36 Identities=0% Similarity=-0.233 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+...+.+++++++ .+++.+++||| ..+|..+=+.++
T Consensus 144 ~~~~~~~~~~~~~------~~~~~~v~IgD-~~~di~aA~~~G 179 (185)
T TIGR02009 144 HPETFLLAAELLG------VSPNECVVFED-ALAGVQAARAAG 179 (185)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHHHHHCC
Confidence 3456778888887 46789999999 999988766654
No 259
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=70.51 E-value=8.2 Score=40.85 Aligned_cols=51 Identities=22% Similarity=0.177 Sum_probs=33.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCceEEE
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLR 673 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~ir 673 (937)
+++.|...++++.|.+ .-+-+|+|-.-.+-+++..+.++++.---||.++-
T Consensus 82 a~lvPgA~etm~~l~~--~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~ 132 (315)
T COG4030 82 AKLVPGAEETMATLQE--RWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVD 132 (315)
T ss_pred cccCCChHHHHHHHhc--cCCceEEeccHHHHHHHHHHhcCCCcccccccccc
Confidence 4555667777777765 34445666555666777777777766666777664
No 260
>PRK11587 putative phosphatase; Provisional
Probab=70.37 E-value=2.5 Score=44.66 Aligned_cols=36 Identities=6% Similarity=-0.309 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+.......++.++ .+++++++||| ..+|..+=+.++
T Consensus 140 ~p~~~~~~~~~~g------~~p~~~l~igD-s~~di~aA~~aG 175 (218)
T PRK11587 140 EPDAYLLGAQLLG------LAPQECVVVED-APAGVLSGLAAG 175 (218)
T ss_pred CcHHHHHHHHHcC------CCcccEEEEec-chhhhHHHHHCC
Confidence 3566777888887 56899999999 988876554443
No 261
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=70.27 E-value=2.7 Score=43.56 Aligned_cols=35 Identities=14% Similarity=-0.032 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~ 811 (937)
......++++++ .+++.+++||| +. +|..+=+.++
T Consensus 163 ~~~~~~~~~~~~------~~~~~~~~IgD-~~~~Di~~A~~aG 198 (203)
T TIGR02252 163 PKIFQEALERAG------ISPEEALHIGD-SLRNDYQGARAAG 198 (203)
T ss_pred HHHHHHHHHHcC------CChhHEEEECC-CchHHHHHHHHcC
Confidence 456888889888 46899999999 86 7877665554
No 262
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=70.13 E-value=2.1 Score=44.37 Aligned_cols=31 Identities=6% Similarity=-0.111 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHH
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDV 806 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdM 806 (937)
+-..+..+++.++ .+++.+++||| ..+|..+
T Consensus 163 ~p~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~a 193 (197)
T TIGR01548 163 NPEPLILAAKALG------VEACHAAMVGD-TVDDIIT 193 (197)
T ss_pred CHHHHHHHHHHhC------cCcccEEEEeC-CHHHHHH
Confidence 3455777888887 45789999999 8877654
No 263
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=67.93 E-value=14 Score=40.69 Aligned_cols=61 Identities=15% Similarity=0.244 Sum_probs=45.9
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
....+|++|+|-||+..... .....|.+.+.|.+|.+ .|..+++=|--+.+.+..-+..++
T Consensus 120 ~~phVIVfDlD~TLItd~~~-----------v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~~ 180 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD-----------VRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKELK 180 (297)
T ss_pred CCCcEEEEECCCcccccCCc-----------cccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHhC
Confidence 44569999999999987531 22347889999999987 477888877777777776666654
No 264
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=67.87 E-value=5.1 Score=41.42 Aligned_cols=33 Identities=18% Similarity=0.097 Sum_probs=27.2
Q ss_pred HHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 772 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
.+..+++.++ .+...|+++|| +.||..|++.++
T Consensus 183 ~~~~~i~~l~------~~~~~v~~vGD-g~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKELQ------VKPGEVAMVGD-GVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHT------CTGGGEEEEES-SGGHHHHHHHSS
T ss_pred hHHHHHHHHh------cCCCEEEEEcc-CHHHHHHHHhCc
Confidence 5577778877 35679999999 999999999873
No 265
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=67.60 E-value=3 Score=45.11 Aligned_cols=17 Identities=12% Similarity=0.296 Sum_probs=0.0
Q ss_pred cCCeEEEEecCcccCCC
Q 002314 589 SNNRLLILGFNATLTEP 605 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~ 605 (937)
++.++|+||+||||++.
T Consensus 20 ~~~k~viFDlDGTLiDs 36 (248)
T PLN02770 20 APLEAVLFDVDGTLCDS 36 (248)
T ss_pred CccCEEEEcCCCccCcC
No 266
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=67.51 E-value=19 Score=39.75 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=34.1
Q ss_pred ccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 620 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 620 ~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
...+.|.+.+.|..|.+ .|..++|+||-....++..+...+
T Consensus 119 ~l~l~pG~~efl~~L~~-~GIpv~IvS~G~~~~Ie~vL~~lg 159 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQ-HSIPVFIFSAGIGNVLEEVLRQAG 159 (277)
T ss_pred CCccCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHHHcC
Confidence 45678889999999976 589999999999988888887643
No 267
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=67.22 E-value=11 Score=36.73 Aligned_cols=22 Identities=14% Similarity=0.084 Sum_probs=19.6
Q ss_pred CCceEEEEecCCCCcHHHHHhcC
Q 002314 789 AIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 789 ~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
|.++++++|| +.||+-|++.+.
T Consensus 92 ~~~k~vmVGn-GaND~laLr~AD 113 (152)
T COG4087 92 RYEKVVMVGN-GANDILALREAD 113 (152)
T ss_pred CCcEEEEecC-CcchHHHhhhcc
Confidence 5689999999 999999998874
No 268
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=66.74 E-value=34 Score=45.15 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=29.5
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
+-+++.++|+.|.+ .|++|+++||-...........
T Consensus 632 lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~ 667 (1057)
T TIGR01652 632 LQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYS 667 (1057)
T ss_pred hhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHH
Confidence 55778899999886 5999999999998887766544
No 269
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=66.49 E-value=1.9e+02 Score=36.35 Aligned_cols=149 Identities=15% Similarity=0.144 Sum_probs=87.3
Q ss_pred CCcEEEEEecccccCCHHH-HH---HHHHHhHHhCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQ-KL---LAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~-~l---~Af~~ll~~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~ 436 (937)
+.-++++|-|+..-|--.. .| .-+.+++ +.|+.. .-+++|..|....++... +++-+.|.+++..||..-...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik-~~p~~~~~Pv~~IFaGKAhP~d~~g-K~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIK-NNPNKKIRPVQFIFAGKAHPGDYMG-KEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHH-HSTTSCCS-EEEEEE----TT-HHH-HHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHH-hcccCCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHHhcChhhc
Confidence 3456779999998887555 33 3344443 455432 236677666544444322 355566777777777532222
Q ss_pred CcccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc----C-CceEEE
Q 002314 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILV 509 (937)
Q Consensus 437 ~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l----g-~~gllV 509 (937)
+...|+|+. ..+-.--..++.+|||-+.+|+ .|.-|.--+=||.- |++.+|..-|+.-++ | ++.+++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEEc
Confidence 233688764 5577777789999999999998 58888888888885 899999999987554 5 467777
Q ss_pred CCCCHHHHHH
Q 002314 510 NPWNITEVAN 519 (937)
Q Consensus 510 nP~D~~~lA~ 519 (937)
- .+.+++.+
T Consensus 595 G-~~~~ev~~ 603 (713)
T PF00343_consen 595 G-LTAEEVEE 603 (713)
T ss_dssp S--BHHHHHH
T ss_pred C-CCHHHHHH
Confidence 4 35555543
No 270
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=66.17 E-value=3.3 Score=44.43 Aligned_cols=36 Identities=11% Similarity=-0.021 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCC-CCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d-~nDEdMf~~~~ 811 (937)
+......+++.++ .+++.+++||| + ..|..+=+.++
T Consensus 165 ~p~~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~A~~aG 201 (238)
T PRK10748 165 FSDMYHLAAEKLN------VPIGEILHVGD-DLTTDVAGAIRCG 201 (238)
T ss_pred cHHHHHHHHHHcC------CChhHEEEEcC-CcHHHHHHHHHCC
Confidence 4567778888887 56799999999 7 47876644443
No 271
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=65.92 E-value=1.4e+02 Score=38.04 Aligned_cols=150 Identities=12% Similarity=0.123 Sum_probs=100.4
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHhH--HhCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
+..+++.|=|+..-|--.. +|.-+.++. ..+|+.. ..+++|..|....++... ..+-+.|..++..||..=...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMA-KLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHhccChhcCC
Confidence 4567788999998887666 666655553 3456421 236677777655554332 4566778888888875322233
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc----C-CceEEEC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l----g-~~gllVn 510 (937)
...|+|+. ...-.--..++.+|||-...|+ .|.=|.--+=||.- |+|.+|..=|+..++ | ++++++-
T Consensus 608 ~lkVVFle-nY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 608 KLKVVFLP-NYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred ceEEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhc-----CceeeecccchhHHHHHHhCcCcEEEeC
Confidence 44688764 4566666678999999999998 47667666777764 899999888887655 4 5788886
Q ss_pred CCCHHHHHH
Q 002314 511 PWNITEVAN 519 (937)
Q Consensus 511 P~D~~~lA~ 519 (937)
. +.+++.+
T Consensus 682 ~-~~~ev~~ 689 (797)
T cd04300 682 L-TAEEVEA 689 (797)
T ss_pred C-CHHHHHH
Confidence 4 5655544
No 272
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=65.36 E-value=3.3 Score=45.21 Aligned_cols=37 Identities=3% Similarity=-0.278 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+-..+..++++++. .+++.+++||| ..+|..+=+.++
T Consensus 160 ~p~~~~~a~~~l~~-----~~~~e~l~IGD-s~~Di~aA~~aG 196 (267)
T PRK13478 160 YPWMALKNAIELGV-----YDVAACVKVDD-TVPGIEEGLNAG 196 (267)
T ss_pred ChHHHHHHHHHcCC-----CCCcceEEEcC-cHHHHHHHHHCC
Confidence 34567788888873 14688999999 998877666654
No 273
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=65.35 E-value=11 Score=39.03 Aligned_cols=22 Identities=14% Similarity=0.033 Sum_probs=18.7
Q ss_pred CceEEEEecCCCCcHHHHHhcCc
Q 002314 790 IDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 790 ~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+.+++||| +.+|..|.++++.
T Consensus 144 ~~~~v~iGD-s~~D~~~~~aa~~ 165 (205)
T PRK13582 144 GYRVIAAGD-SYNDTTMLGEADA 165 (205)
T ss_pred CCeEEEEeC-CHHHHHHHHhCCC
Confidence 467999999 9999999888753
No 274
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=65.24 E-value=6.5 Score=41.21 Aligned_cols=32 Identities=9% Similarity=0.187 Sum_probs=0.0
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCH 636 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~ 636 (937)
.++++||+||||++. ..........+.+.+..
T Consensus 2 ~~~viFDlDGTL~ds--------------~~~~~~~~~~~~~~~~~ 33 (221)
T TIGR02253 2 IKAIFFDLDDTLIDT--------------SGLAEKARRNAIEVLIE 33 (221)
T ss_pred ceEEEEeCCCCCcCC--------------CCccCHHHHHHHHHHHH
No 275
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=63.98 E-value=12 Score=38.60 Aligned_cols=39 Identities=15% Similarity=0.260 Sum_probs=26.4
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
..+.|..++.++...+ .++.|+|+||-.-..+..+|..+
T Consensus 72 i~Idp~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 72 IKIDPGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred cccCccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHhh
Confidence 4566666666666655 47777777777777777766653
No 276
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=63.87 E-value=38 Score=44.37 Aligned_cols=64 Identities=16% Similarity=0.169 Sum_probs=45.8
Q ss_pred EcCeEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCcCCCCCCCCCCCCCCCCCcCCc
Q 002314 755 QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVP 833 (937)
Q Consensus 755 ~Gk~~vEV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (937)
..+.++-+|..-.-|+..++.+.+.. .--+++||| +.||..|++.+.- |+|+.=.++.|+.-+|
T Consensus 768 ~C~sViCCR~sPlQKA~Vv~lVk~~~---------~~~TLAIGD-GANDVsMIQ~AhV-----GVGIsG~EGmQAvmsS 831 (1151)
T KOG0206|consen 768 RCKSVICCRVSPLQKALVVKLVKKGL---------KAVTLAIGD-GANDVSMIQEAHV-----GVGISGQEGMQAVMSS 831 (1151)
T ss_pred hcCEEEEccCCHHHHHHHHHHHHhcC---------CceEEEeeC-CCccchheeeCCc-----Ceeeccchhhhhhhcc
Confidence 34566777777778999998884443 345799999 9999999997754 5666665555554443
No 277
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=63.50 E-value=4.1 Score=42.87 Aligned_cols=36 Identities=3% Similarity=-0.056 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+...+..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 144 ~p~~~~~a~~~~~------~~p~~~l~igD-s~~di~aA~~aG 179 (221)
T PRK10563 144 DPALMFHAAEAMN------VNVENCILVDD-SSAGAQSGIAAG 179 (221)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHHHHHCC
Confidence 5678889999988 56789999999 888877655554
No 278
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=63.07 E-value=8.2 Score=41.63 Aligned_cols=38 Identities=13% Similarity=0.343 Sum_probs=20.0
Q ss_pred CChhHHHHHHHhhc-CCCCeEEEEcCCChhhHHHHhccc
Q 002314 623 LHPDLKQPLNALCH-DPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 623 ~~~~~~~~L~~L~~-d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
+.|.++++|+.+++ ..+..++|+|--.--.|+.++...
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~ 110 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH 110 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC
Confidence 34455555555532 235555666655555555555543
No 279
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=62.49 E-value=3.9 Score=42.80 Aligned_cols=36 Identities=17% Similarity=0.008 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHh-cccccCCCCCceEEEEecCCC-CcHHHHHhcC
Q 002314 769 KGAAIDRILAEI-VHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l-~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~ 811 (937)
+...+..+++++ + .+++.+++||| +. +|..+=+.++
T Consensus 154 ~~~~~~~~~~~~~~------~~~~~~v~igD-~~~~di~~A~~~G 191 (224)
T TIGR02254 154 DKEIFNYALERMPK------FSKEEVLMIGD-SLTADIKGGQNAG 191 (224)
T ss_pred CHHHHHHHHHHhcC------CCchheEEECC-CcHHHHHHHHHCC
Confidence 456678888888 7 46789999999 87 6877665554
No 280
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=61.96 E-value=4.6 Score=41.25 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHh
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 809 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~ 809 (937)
+-...+.++++++ .+++.+++||| ...|..+=+.
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~l~vgD-~~~di~aA~~ 176 (184)
T TIGR01993 143 SPQAYEKALREAG------VDPERAIFFDD-SARNIAAAKA 176 (184)
T ss_pred CHHHHHHHHHHhC------CCccceEEEeC-CHHHHHHHHH
Confidence 3457788889888 46789999999 8776554333
No 281
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=61.36 E-value=36 Score=33.76 Aligned_cols=72 Identities=19% Similarity=0.258 Sum_probs=51.8
Q ss_pred HHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
.-+.++..+++++ ++..|.||.|..-++.++. ..+.+++.++++..+|+ .||++....++-.+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3455666666665 3567889999877766665 66678999999998887 589998888876665555554
Q ss_pred cc
Q 002314 460 TD 461 (937)
Q Consensus 460 AD 461 (937)
++
T Consensus 110 ~~ 111 (141)
T COG0816 110 AG 111 (141)
T ss_pred cC
Confidence 43
No 282
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=60.71 E-value=4.2 Score=43.32 Aligned_cols=17 Identities=12% Similarity=0.087 Sum_probs=14.3
Q ss_pred ccceeeCCHHHHHHHHH
Q 002314 905 NARFLLQSSDEVVSFLK 921 (937)
Q Consensus 905 ~A~y~l~~~~~V~~~L~ 921 (937)
.|.|.+++++++.+.|.
T Consensus 209 ~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 209 QADVLVEQPQLLWNPAT 225 (229)
T ss_pred CCCeeeCCHHHHHHHhc
Confidence 48899999999988764
No 283
>PRK09449 dUMP phosphatase; Provisional
Probab=59.84 E-value=4.6 Score=42.53 Aligned_cols=36 Identities=19% Similarity=-0.029 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~ 811 (937)
-.....++++++. .+.+.+++||| +. +|..+=+.++
T Consensus 153 p~~~~~~~~~~~~-----~~~~~~~~vgD-~~~~Di~~A~~aG 189 (224)
T PRK09449 153 VAIFDYALEQMGN-----PDRSRVLMVGD-NLHSDILGGINAG 189 (224)
T ss_pred HHHHHHHHHHcCC-----CCcccEEEEcC-CcHHHHHHHHHCC
Confidence 4567888888872 24578999999 86 5876554443
No 284
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=59.55 E-value=20 Score=39.03 Aligned_cols=26 Identities=4% Similarity=0.277 Sum_probs=19.8
Q ss_pred CccceeeCCHHHHHHHHHHhhhccCc
Q 002314 904 TNARFLLQSSDEVVSFLKKLADASSS 929 (937)
Q Consensus 904 t~A~y~l~~~~~V~~~L~~La~~~~~ 929 (937)
..|.|.++++.++.++|..+......
T Consensus 238 ~~a~~vi~~~~~l~~~l~~~~~~~~~ 263 (267)
T PRK13478 238 AGAHYVIDTIADLPAVIADIEARLAR 263 (267)
T ss_pred cCCCeehhhHHHHHHHHHHHHHHHhc
Confidence 35889999999999999776554433
No 285
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=58.90 E-value=4.4 Score=41.13 Aligned_cols=13 Identities=15% Similarity=0.501 Sum_probs=0.0
Q ss_pred EEEEecCcccCCC
Q 002314 593 LLILGFNATLTEP 605 (937)
Q Consensus 593 LI~lD~DGTL~~~ 605 (937)
+|+||+||||++.
T Consensus 1 ~iiFD~DGTL~ds 13 (185)
T TIGR01990 1 AVIFDLDGVITDT 13 (185)
T ss_pred CeEEcCCCccccC
No 286
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=57.87 E-value=1.2e+02 Score=38.55 Aligned_cols=150 Identities=14% Similarity=0.103 Sum_probs=98.8
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHhH--HhCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
+..+++++-|+..-|--.. +|..+.++. ..+|+.. ..+++|..|....++... ..+-+.|..++..||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhcCChhhCC
Confidence 3446678899998887666 666655553 3456522 236677777655554332 3556677888888874322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----CCceEEEC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g~~gllVn 510 (937)
...|+|+. ...-.--..++.+|||....|+ .|.=|.--+=||.- |++-+|..=|+.-++ +++++++-
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amN-----GaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhc-----CceeeecccchHHHHHHHhCcCcEEEeC
Confidence 34688754 5566666778999999999998 47667766777764 899999999986544 46888886
Q ss_pred CCCHHHHHH
Q 002314 511 PWNITEVAN 519 (937)
Q Consensus 511 P~D~~~lA~ 519 (937)
. +.+++.+
T Consensus 681 ~-~~~ev~~ 688 (798)
T PRK14985 681 H-TVEQVKA 688 (798)
T ss_pred C-CHHHHHH
Confidence 5 4555443
No 287
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=57.83 E-value=4e+02 Score=32.51 Aligned_cols=108 Identities=18% Similarity=0.174 Sum_probs=76.6
Q ss_pred EEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC
Q 002314 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (937)
Q Consensus 366 IL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~ 445 (937)
++|..=-.+.|=.++.+.-.-++++.-|+- +|++.+++ +.+ +....+++++++- |. +...++| .
T Consensus 431 vVf~c~~n~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~~~---~~~~~l~~la~~~----Gv-~~eRL~f-~ 494 (620)
T COG3914 431 VVFCCFNNYFKITPEVFALWMQILSAVPNS----VLLLKAGG---DDA---EINARLRDLAERE----GV-DSERLRF-L 494 (620)
T ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCCc----EEEEecCC---CcH---HHHHHHHHHHHHc----CC-Chhheee-c
Confidence 333333347888999999999999999984 36656543 222 3456666776653 32 3345665 6
Q ss_pred CCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCC
Q 002314 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF 495 (937)
Q Consensus 446 ~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~ 495 (937)
...+.++..+-|..||+++-|=-|-| ..++.|++-. |++|++-.
T Consensus 495 p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~ 538 (620)
T COG3914 495 PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRV 538 (620)
T ss_pred CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeec
Confidence 77888999999999999998877766 4678999998 67787743
No 288
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=56.68 E-value=5 Score=40.47 Aligned_cols=30 Identities=13% Similarity=0.002 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHH
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDV 806 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdM 806 (937)
-.....++++++ .+++.+++||| ...|..+
T Consensus 142 p~~f~~~~~~~~------~~p~~~l~vgD-~~~Di~~ 171 (175)
T TIGR01493 142 PVVYELVFDTVG------LPPDRVLMVAA-HQWDLIG 171 (175)
T ss_pred HHHHHHHHHHHC------CCHHHeEeEec-ChhhHHH
Confidence 445677788887 56899999999 8888654
No 289
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=55.48 E-value=2e+02 Score=36.19 Aligned_cols=137 Identities=16% Similarity=0.217 Sum_probs=91.8
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHhHHhCc-CccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCccc
Q 002314 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENS-DWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P-~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 440 (937)
+..+++++=|+..-|--...+.=..++...-- ++..+|.+|..|....++... ..+-+.+...+..||.+ ..
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~a-K~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAA-KEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHH-HHHHHHHHHHHHhhccc------ce
Confidence 35678889999988876655554444433222 455567767666554444332 35666777777777753 35
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCC--cCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----CCceEEECC
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNP 511 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~--EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP 511 (937)
|+|+. ..+-.--..++.+|||-..+|++ |.=|..-+=|+.- |++-+|..=|+--++ |.+|+++-.
T Consensus 559 VvFl~-nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alN-----GaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 559 VVFLP-NYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALN-----GALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred EEEeC-CCChhHHHhhcccccccccCCCCCccccCcCcchHHhc-----CCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 78764 44555556689999999999984 6666655666553 889999999988665 578888864
No 290
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=54.21 E-value=13 Score=39.20 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=27.9
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 766 gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|..|..+++.+.. ..+.+++||| +.||..|.+.+.-
T Consensus 142 g~~K~~~l~~~~~----------~~~~~i~iGD-g~~D~~~a~~Ad~ 177 (214)
T TIGR03333 142 GCCKPSLIRKLSE----------PNDYHIVIGD-SVTDVEAAKQSDL 177 (214)
T ss_pred CCCHHHHHHHHhh----------cCCcEEEEeC-CHHHHHHHHhCCe
Confidence 3468888876642 2467899999 9999999988764
No 291
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=53.35 E-value=15 Score=37.24 Aligned_cols=38 Identities=13% Similarity=0.274 Sum_probs=30.3
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
+.+.+.+.|+.|.+ .+..++|+|+.....++..+..++
T Consensus 73 l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~ 110 (188)
T TIGR01489 73 IDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGIG 110 (188)
T ss_pred CCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHcC
Confidence 44568888888876 588999999999888888777654
No 292
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=53.18 E-value=2e+02 Score=33.66 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=60.5
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccc---------cCCc-eEEECCCCH
Q 002314 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---------LGAG-AILVNPWNI 514 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~---------lg~~-gllVnP~D~ 514 (937)
...+++.+ ++..||+++- .-|+|.+ .|++.. |+++++- ....++ +|-| ++...++..
T Consensus 289 ~~~~p~~~---~l~~ad~vI~---hGG~gtt-~eaL~~-----gvP~vv~-P~~~DQ~~nA~rve~~G~G~~l~~~~l~~ 355 (406)
T COG1819 289 ADYVPQLE---LLPRADAVIH---HGGAGTT-SEALYA-----GVPLVVI-PDGADQPLNAERVEELGAGIALPFEELTE 355 (406)
T ss_pred ecCCCHHH---HhhhcCEEEe---cCCcchH-HHHHHc-----CCCEEEe-cCCcchhHHHHHHHHcCCceecCcccCCH
Confidence 56667665 7889999995 4688876 788887 4444442 222333 2432 344457999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhhhhhhhcCCHHHHHHHHHH
Q 002314 515 TEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (937)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~~~~~W~~~fl~ 557 (937)
+.++++|+++|+++. -+++.+++.+....++...=+...|.
T Consensus 356 ~~l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~le 396 (406)
T COG1819 356 ERLRAAVNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLLE 396 (406)
T ss_pred HHHHHHHHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 999999999998653 33334444555555554443333333
No 293
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=52.88 E-value=9.9 Score=43.90 Aligned_cols=72 Identities=11% Similarity=0.086 Sum_probs=50.0
Q ss_pred HHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-------CCceE-EEC-----C-CCHHHH
Q 002314 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAI-LVN-----P-WNITEV 517 (937)
Q Consensus 452 el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-------g~~gl-lVn-----P-~D~~~l 517 (937)
++-.+-+.|.+.|+||++|..|.++.|....+ -|-|.+..+|....+ ..-|| +|+ | .+++++
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMG----iPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEec----cccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 34567789999999999999999999988873 566666666654332 12354 443 2 355677
Q ss_pred HHHHHHHHcC
Q 002314 518 ANAIARALNM 527 (937)
Q Consensus 518 A~aI~~aL~m 527 (937)
++-|......
T Consensus 569 ~~~m~~F~~q 578 (692)
T KOG3742|consen 569 ASFMYEFCKQ 578 (692)
T ss_pred HHHHHHHHHH
Confidence 7777777753
No 294
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=52.42 E-value=88 Score=40.82 Aligned_cols=40 Identities=10% Similarity=0.272 Sum_probs=33.9
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+-+++.+++++|.+ .|.+|+++||-...........+++
T Consensus 579 plr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~GI 618 (941)
T TIGR01517 579 PLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNCGI 618 (941)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCC
Confidence 467899999999987 5999999999999998887766543
No 295
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=52.22 E-value=8 Score=40.35 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
......++++++ .+++.+++||| ...|..+=+.+
T Consensus 155 p~~~~~~~~~~g------~~~~~~l~i~D-~~~di~aA~~a 188 (211)
T TIGR02247 155 PRIYQLMLERLG------VAPEECVFLDD-LGSNLKPAAAL 188 (211)
T ss_pred HHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHc
Confidence 456788888887 56789999999 77776554444
No 296
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=51.98 E-value=27 Score=37.12 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=34.3
Q ss_pred EEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 761 EV~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
...|++.=||..++.+....-. ..++.+.++|+|| +.||.--...+
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~~---~gv~yer~iYvGD-G~nD~CP~l~L 201 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQLK---DGVRYERLIYVGD-GANDFCPVLRL 201 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHhh---cCCceeeEEEEcC-CCCCcCcchhc
Confidence 4578999999999998776521 1256789999999 99997544333
No 297
>PLN00414 glycosyltransferase family protein
Probab=51.97 E-value=2.4e+02 Score=33.52 Aligned_cols=108 Identities=11% Similarity=0.178 Sum_probs=60.9
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe-----CCCCccccc--C-CceEEECC-----
Q 002314 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-----EFAGAAQSL--G-AGAILVNP----- 511 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS-----e~aG~~~~l--g-~~gllVnP----- 511 (937)
.+.+++.++.+- ...++|| ..-|+|-+ +|++++ |++++. +..--+..+ . .-|+.+..
T Consensus 317 ~~w~PQ~~vL~h-~~v~~fv---tH~G~nS~-~Ea~~~-----GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 386 (446)
T PLN00414 317 EGWVEQPLILSH-PSVGCFV---NHCGFGSM-WESLVS-----DCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGW 386 (446)
T ss_pred eccCCHHHHhcC-CccceEE---ecCchhHH-HHHHHc-----CCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCc
Confidence 577888776543 3334555 25687764 899998 444443 222222222 0 23566632
Q ss_pred CCHHHHHHHHHHHHcCCHHHH---HHHHHhhhhhh-hcCCHHHHHHHHHHHHHHh
Q 002314 512 WNITEVANAIARALNMSPEER---EKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (937)
Q Consensus 512 ~D~~~lA~aI~~aL~m~~~er---~~r~~~~~~~V-~~~~~~~W~~~fl~~l~~~ 562 (937)
-+.+++++++++++..+.+++ +++.+..++.+ ..-....+.++|++++.+.
T Consensus 387 ~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 387 FSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred cCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 478899999999997653222 22333333333 3333356678888777543
No 298
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=51.83 E-value=14 Score=38.89 Aligned_cols=37 Identities=11% Similarity=0.036 Sum_probs=29.6
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+-.|...++.+ +..+ ..++++|| +.||..|++.+..
T Consensus 129 ~~~~K~~~l~~l-~~~~---------~~~v~vGD-s~nDl~ml~~Ag~ 165 (203)
T TIGR02137 129 QKDPKRQSVIAF-KSLY---------YRVIAAGD-SYNDTTMLSEAHA 165 (203)
T ss_pred CcchHHHHHHHH-HhhC---------CCEEEEeC-CHHHHHHHHhCCC
Confidence 345799988887 4443 26899999 9999999999976
No 299
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=49.55 E-value=2e+02 Score=36.58 Aligned_cols=150 Identities=11% Similarity=0.110 Sum_probs=98.9
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHhH--HhCcCcc-CcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCC
Q 002314 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
+..+++.+-|+..-|--.. +|..+.++. ..+|+.. ..+++|..|....++... ..+-+.|..++..||..=...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMA-KLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHH-HHHHHHHHHHHHHhccChhhCC
Confidence 3456678999998887666 566555543 3455431 235677777665555432 4566677888888775322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHHccEEEECCC--CcCCChhHHHHHHhcCCCCceEEEeCCCCccccc----C-CceEEEC
Q 002314 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l----g-~~gllVn 510 (937)
...|+|+. ..+-.--..++.+|||-...|+ .|.=|.--+=||.- |++-+|..=|+..++ | ++++++-
T Consensus 605 ~lkVVFle-nY~VslAe~iipaaDvseqistag~EASGTsnMK~alN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 605 KLKVVFVP-NYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred ceeEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhc-----CcceeecccchhHHHHHHhCcccEEEcC
Confidence 34688764 4566666778999999999998 47677766777764 889999888887655 3 5777775
Q ss_pred CCCHHHHHH
Q 002314 511 PWNITEVAN 519 (937)
Q Consensus 511 P~D~~~lA~ 519 (937)
. +.+++.+
T Consensus 679 ~-~~~ev~~ 686 (794)
T TIGR02093 679 L-TVEEVEA 686 (794)
T ss_pred C-CHHHHHH
Confidence 3 5666554
No 300
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=48.67 E-value=23 Score=30.60 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=28.0
Q ss_pred HHHHHHHHhcccccCCCCCceEEEEecCC-CCcHHHHHhcCc
Q 002314 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKDEDVYAFFEP 812 (937)
Q Consensus 772 Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d-~nDEdMf~~~~~ 812 (937)
.++.+++.++ ++++.+++||| . .+|+.+=+.++-
T Consensus 9 ~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~a~~~G~ 43 (75)
T PF13242_consen 9 MLEQALKRLG------VDPSRCVMVGD-SLETDIEAAKAAGI 43 (75)
T ss_dssp HHHHHHHHHT------SGGGGEEEEES-STTTHHHHHHHTTS
T ss_pred HHHHHHHHcC------CCHHHEEEEcC-CcHhHHHHHHHcCC
Confidence 4667778877 46889999999 8 999999888865
No 301
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=48.37 E-value=55 Score=38.69 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=56.4
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCC-CCCCCCcccc-ccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHH
Q 002314 578 READSIERYLRSNNRLLILGFNATLTEPVD-TPGRRGDQIR-EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (937)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~-~P~~~~~~~~-~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 655 (937)
.+..++.+-.....|.++||+|+||..-+- +-|..+=++. ......-.+..+.+..|.. .|..++|+|=....+.++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 466677777788889999999999986321 1111010110 0011233467778888876 699999999999999999
Q ss_pred HhcccC
Q 002314 656 NFQEYN 661 (937)
Q Consensus 656 ~~~~~~ 661 (937)
.|...+
T Consensus 288 vF~khp 293 (574)
T COG3882 288 VFRKHP 293 (574)
T ss_pred HHhhCC
Confidence 887753
No 302
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=45.91 E-value=27 Score=42.43 Aligned_cols=83 Identities=13% Similarity=0.130 Sum_probs=51.2
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccccc-CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHH---HHhccc-Cce
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEY-NLW 663 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~-~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~---~~~~~~-~l~ 663 (937)
-..++|+.|+|||++... +.++-++-... --+..+..+-.++.+ .|.+++-+|.|++...+ .++..+ ..|
T Consensus 528 Wn~kIVISDIDGTITKSD----vLGh~lp~iGkDWTh~GVAkLyt~Ik~-NGYk~lyLSARaIgQA~~TR~yL~nv~QdG 602 (738)
T KOG2116|consen 528 WNDKIVISDIDGTITKSD----VLGHVLPMIGKDWTHTGVAKLYTKIKE-NGYKILYLSARAIGQADSTRQYLKNVEQDG 602 (738)
T ss_pred cCCcEEEecCCCceEhhh----hhhhhhhhhcCcchhhhHHHHHHHHHh-CCeeEEEEehhhhhhhHHHHHHHHHHhhcC
Confidence 356899999999999652 12222221111 123467777777776 59999999999986543 455554 344
Q ss_pred EEeeCceEEEecC
Q 002314 664 LAAENGMFLRCTT 676 (937)
Q Consensus 664 liaenG~~ir~~~ 676 (937)
.+--.|=.+..++
T Consensus 603 ~~LPdGPViLSPd 615 (738)
T KOG2116|consen 603 KKLPDGPVILSPD 615 (738)
T ss_pred ccCCCCCEEeCCC
Confidence 4545554444333
No 303
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=45.70 E-value=42 Score=41.01 Aligned_cols=33 Identities=21% Similarity=0.142 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+|...++++.+. .+.++++|| +.||.+|++.+.
T Consensus 454 ~K~~~v~~l~~~----------~~~v~~VGD-g~nD~~al~~A~ 486 (562)
T TIGR01511 454 DKAALIKELQEK----------GRVVAMVGD-GINDAPALAQAD 486 (562)
T ss_pred HHHHHHHHHHHc----------CCEEEEEeC-CCccHHHHhhCC
Confidence 687777776542 467999999 999999998763
No 304
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=45.61 E-value=11 Score=38.33 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=27.3
Q ss_pred CHHHHHHHH---HHHhcccccCCCCCceEEEEecCCCCcHHHHH
Q 002314 768 TKGAAIDRI---LAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 808 (937)
Q Consensus 768 nKG~Av~~L---l~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~ 808 (937)
+|..+++.+ ... + .+.+.++++|| +.||.+|++
T Consensus 157 ~K~~~l~~~~~~~~~-~------~~~~~~~~iGD-s~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-D------IDPDRVIAIGD-SINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-T------HTCCEEEEEES-SGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-C------CCCCeEEEEEC-CHHHHHHhC
Confidence 699999999 333 3 35788999999 999999986
No 305
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=45.45 E-value=53 Score=33.43 Aligned_cols=35 Identities=11% Similarity=-0.016 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
-..+..+++.++ .+++++++||| ..+|..+-+.++
T Consensus 106 p~~~~~~~~~l~------~~~~~~~~VgD-s~~Di~~A~~aG 140 (181)
T PRK08942 106 PGMLLSIAERLN------IDLAGSPMVGD-SLRDLQAAAAAG 140 (181)
T ss_pred HHHHHHHHHHcC------CChhhEEEEeC-CHHHHHHHHHCC
Confidence 456778888887 46899999999 988887776665
No 306
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=45.07 E-value=21 Score=34.81 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=41.0
Q ss_pred EEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 594 I~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+.++++|++.- .++-+++.+.|++|.+ ...|+|+||-...++.++....+
T Consensus 17 ~~~~v~~tiatg---------------Gklf~ev~e~iqeL~d--~V~i~IASgDr~gsl~~lae~~g 67 (152)
T COG4087 17 KAGKVLYTIATG---------------GKLFSEVSETIQELHD--MVDIYIASGDRKGSLVQLAEFVG 67 (152)
T ss_pred ecceEEEEEccC---------------cEEcHhhHHHHHHHHH--hheEEEecCCcchHHHHHHHHcC
Confidence 356889999865 3456788999999986 39999999999999988877654
No 307
>PRK06769 hypothetical protein; Validated
Probab=44.90 E-value=32 Score=35.08 Aligned_cols=35 Identities=11% Similarity=-0.064 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 770 G~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
-..+..++++++ .+++++++||| ..+|..+=+.++
T Consensus 96 p~~~~~~~~~l~------~~p~~~i~IGD-~~~Di~aA~~aG 130 (173)
T PRK06769 96 TGMLLQAAEKHG------LDLTQCAVIGD-RWTDIVAAAKVN 130 (173)
T ss_pred HHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCC
Confidence 445677788877 46799999999 877766555543
No 308
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=43.92 E-value=37 Score=32.44 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=28.0
Q ss_pred HHHhCCCCCEEEEeCccc-chHHHHHHhhCCCCeEEEEEcc
Q 002314 225 VNKHYKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHT 264 (937)
Q Consensus 225 i~~~~~~~DvVwvHDyhl-~llp~~Lr~~~~~~~I~~flH~ 264 (937)
+.+..+ +|+||+|.... .+++.++++.....|+.++.|.
T Consensus 69 ~ik~~~-~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 69 IIKKEK-PDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred HhccCC-CCEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 333344 69999999775 5667777665545899999994
No 309
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=43.77 E-value=62 Score=35.32 Aligned_cols=83 Identities=17% Similarity=0.268 Sum_probs=0.0
Q ss_pred chHHHHHHHHhc-CCeEEEEecCcccCCCCCCCCCCCccc---------------------------------cccccCC
Q 002314 578 READSIERYLRS-NNRLLILGFNATLTEPVDTPGRRGDQI---------------------------------REMELKL 623 (937)
Q Consensus 578 ~~~~~~~~y~~s-~~rLI~lD~DGTL~~~~~~P~~~~~~~---------------------------------~~~~~~~ 623 (937)
+++++.+...+. ..-|++||+|-||+... .+ .+... ......+
T Consensus 6 s~~eV~~~~~~~~~~tLvvfDiDdTLi~~~-~~--lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~li 82 (252)
T PF11019_consen 6 SFHEVQDYLENADQDTLVVFDIDDTLITPK-QP--LGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELI 82 (252)
T ss_pred CHHHHHHHHHcCCCCeEEEEEcchhhhcCc-cc--cCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEc
Q ss_pred ChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc-CceE
Q 002314 624 HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWL 664 (937)
Q Consensus 624 ~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~-~l~l 664 (937)
.+.+.+.|+.|++ .+.+|+.+|.|+.......+..+ .+++
T Consensus 83 e~~~~~~i~~lq~-~~~~v~alT~~~~~~~~~t~~~Lk~~gi 123 (252)
T PF11019_consen 83 ESDVPNIINSLQN-KGIPVIALTARGPNMEDWTLRELKSLGI 123 (252)
T ss_pred chhHHHHHHHHHH-CCCcEEEEcCCChhhHHHHHHHHHHCCC
No 310
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=42.70 E-value=14 Score=38.67 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=22.5
Q ss_pred HHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 771 AAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 771 ~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
..-+.+++.++ ++++.+++|||.-.||...-+.+
T Consensus 158 ~~f~~~~~~~g------~~p~~~l~VgD~~~~di~gA~~~ 191 (229)
T COG1011 158 EIFEYALEKLG------VPPEEALFVGDSLENDILGARAL 191 (229)
T ss_pred HHHHHHHHHcC------CCcceEEEECCChhhhhHHHHhc
Confidence 34567788887 56899999999444454444444
No 311
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=40.31 E-value=16 Score=37.91 Aligned_cols=14 Identities=14% Similarity=0.320 Sum_probs=0.0
Q ss_pred eEEEEecCcccCCC
Q 002314 592 RLLILGFNATLTEP 605 (937)
Q Consensus 592 rLI~lD~DGTL~~~ 605 (937)
.+|+||+||||++.
T Consensus 1 ~~viFDldgvL~d~ 14 (199)
T PRK09456 1 MLYIFDLGNVIVDI 14 (199)
T ss_pred CEEEEeCCCccccC
No 312
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=40.24 E-value=1.1e+02 Score=36.56 Aligned_cols=64 Identities=20% Similarity=0.258 Sum_probs=45.0
Q ss_pred HHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 586 y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
+.....+.+++=++++++..-. ..-.+-+++.++++.|.+ .|..++++||.........-..++
T Consensus 322 ~~~~g~~~~~~a~~~~~~g~i~-----------l~d~lr~~~~~~i~~l~~-~gi~~~~ltGD~~~~a~~ia~~lg 385 (499)
T TIGR01494 322 LAQSGLRVLAVASKETLLGLLG-----------LEDPLRDDAKETISELRE-AGIRVIMLTGDNVLTAKAIAKELG 385 (499)
T ss_pred HHhCCCEEEEEEECCeEEEEEE-----------ecCCCchhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC
Confidence 3445556667768887664321 122356788899999887 688999999999988877666654
No 313
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=40.07 E-value=41 Score=41.08 Aligned_cols=63 Identities=21% Similarity=0.338 Sum_probs=50.3
Q ss_pred hcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
....+.++++.||+++..-. ....+.|++.++|++|.+ .|..++|+||......+.....+++
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~-----------~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFA-----------LEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred hCCCEEEEEEECCEEEEEEE-----------ecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 44568899999999875421 123467899999999987 5899999999999999998888766
No 314
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=39.84 E-value=43 Score=34.40 Aligned_cols=82 Identities=12% Similarity=0.140 Sum_probs=53.3
Q ss_pred cchHHHHHHHHhcCCeEEEEecCcccCCCCC---------CCCCCCcccc-----------ccccCCChhHHHHHHHhhc
Q 002314 577 LREADSIERYLRSNNRLLILGFNATLTEPVD---------TPGRRGDQIR-----------EMELKLHPDLKQPLNALCH 636 (937)
Q Consensus 577 L~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~---------~P~~~~~~~~-----------~~~~~~~~~~~~~L~~L~~ 636 (937)
.++.++...+..-+.-.+-||+|.|++=..+ .|+. .+-++ -+.-.++.+....|-.+.+
T Consensus 49 iSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs-~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq 127 (237)
T COG3700 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGS-EDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCCh-HHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHH
Confidence 3566677777766777788899999884421 1110 01111 1334577777777777777
Q ss_pred CCCCeEEEEcCCChhhHHHHhcc
Q 002314 637 DPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 637 d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
..|-.|+.+|||+...++..-+.
T Consensus 128 ~RGD~i~FvTGRt~gk~d~vsk~ 150 (237)
T COG3700 128 RRGDAIYFVTGRTPGKTDTVSKT 150 (237)
T ss_pred hcCCeEEEEecCCCCcccccchh
Confidence 78999999999998766544433
No 315
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=39.59 E-value=4.4e+02 Score=29.80 Aligned_cols=87 Identities=18% Similarity=0.239 Sum_probs=47.8
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCccc
Q 002314 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (937)
Q Consensus 362 ~~~iIL~VdRld~~KGi~~-~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~p 440 (937)
++.+++..|--.+.|--+. .+.++.+.+.+. .+ .++++|+|.. .+. ...+++++.++. .+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~~----~vvl~ggp~e---~e~----~~~~~i~~~~~~-------~~ 243 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-GY----EVVLTSGPDK---DDL----ACVNEIAQGCQT-------PP 243 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHC-CC----eEEEEcCCCh---HHH----HHHHHHHHhcCC-------Cc
Confidence 4556677776556777542 333443333332 22 2445555431 111 112233322211 13
Q ss_pred EEEeCCCCCHHHHHHHHHHccEEEECC
Q 002314 441 IHHLDRSLDFPALCALYAVTDVALVTS 467 (937)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~S 467 (937)
++-+.|..+-.|+.++++.||++|-+-
T Consensus 244 ~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 244 VTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred cccccCCCCHHHHHHHHHhCCEEEecC
Confidence 444678899999999999999999664
No 316
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=38.12 E-value=61 Score=33.69 Aligned_cols=16 Identities=13% Similarity=0.297 Sum_probs=13.8
Q ss_pred CeEEEEecCcccCCCC
Q 002314 591 NRLLILGFNATLTEPV 606 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~ 606 (937)
.++++||+||||++..
T Consensus 1 ~k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQ 16 (224)
T ss_pred CCEEEEcCcCcccccc
Confidence 3789999999999873
No 317
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=36.89 E-value=95 Score=33.32 Aligned_cols=61 Identities=3% Similarity=0.186 Sum_probs=40.9
Q ss_pred chHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC--CChhhHHH
Q 002314 578 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG--SDRNVLDK 655 (937)
Q Consensus 578 ~~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG--R~~~~L~~ 655 (937)
+..++.+.|...-..+++.|.|||+.... ...+.++++++..+..| .++| |+.+++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~~-------------------~n~~~i~~i~~~~~~pv-~~gGGIrs~edv~~ 90 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGKP-------------------KNLDVVKNIIRETGLKV-QVGGGLRTYESIKD 90 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCCc-------------------chHHHHHHHHhhCCCCE-EEcCCCCCHHHHHH
Confidence 56667777776556799999999997542 23566677666444444 4444 57788888
Q ss_pred Hhc
Q 002314 656 NFQ 658 (937)
Q Consensus 656 ~~~ 658 (937)
++.
T Consensus 91 l~~ 93 (228)
T PRK04128 91 AYE 93 (228)
T ss_pred HHH
Confidence 775
No 318
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=36.82 E-value=26 Score=36.98 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 767 vnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
..|..+++.+ + ...+.+++||| +.+|..|.+.++-
T Consensus 147 ~~K~~~l~~~----~------~~~~~~i~iGD-s~~Di~aa~~Ag~ 181 (219)
T PRK09552 147 CCKPSLIRKL----S------DTNDFHIVIGD-SITDLEAAKQADK 181 (219)
T ss_pred CchHHHHHHh----c------cCCCCEEEEeC-CHHHHHHHHHCCc
Confidence 4588776653 3 23568999999 9999999887754
No 319
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=36.69 E-value=6.6e+02 Score=28.29 Aligned_cols=194 Identities=15% Similarity=0.123 Sum_probs=102.7
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCC-CeEEEEEccCCCchhhhccCccchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSD-MKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~-~~I~~flH~PfPs~e~fr~lp~r~eil~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (937)
.+|+|.--.-+-..+...||+.... .+.++-.+-..| .+ ..|+|.--.++
T Consensus 57 ~pdLiIsaGr~t~~~~~~l~r~~gg~~~~V~i~~P~~~-~~----------------~FDlvi~p~HD------------ 107 (311)
T PF06258_consen 57 WPDLIISAGRRTAPAALALRRASGGRTKTVQIMDPRLP-PR----------------PFDLVIVPEHD------------ 107 (311)
T ss_pred CCcEEEECCCchHHHHHHHHHHcCCCceEEEEcCCCCC-cc----------------ccCEEEECccc------------
Confidence 4689888777778888888887654 344443331122 11 24665432221
Q ss_pred hCcccCCCceeeCCeeeEEEEEecccChhhhhhhhcCCchHHHHHHHHHHh---cCCcEEEEEecc--cccCCH---HHH
Q 002314 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRL--DMIKGI---PQK 381 (937)
Q Consensus 310 lg~~~~~~~v~~~gr~~~i~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIL~VdRl--d~~KGi---~~~ 381 (937)
++. -..........|+.|+++.+.... ..+..++ ....+.+-||-- .+.=+- ..+
T Consensus 108 -~~~-------~~~Nvl~t~ga~~~i~~~~l~~a~---------~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l 170 (311)
T PF06258_consen 108 -RLP-------RGPNVLPTLGAPNRITPERLAEAA---------AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERL 170 (311)
T ss_pred -CcC-------CCCceEecccCCCcCCHHHHHHHH---------HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHH
Confidence 110 011122333457888888775431 2233333 345566666642 122222 266
Q ss_pred HHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHcc
Q 002314 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (937)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 461 (937)
+..+..+.+.++ . .++ |...-|+.. +..+.+.++.+. ...+.++. .-+..=+.+++..||
T Consensus 171 ~~~l~~~~~~~~-~----~~~-vttSRRTp~----~~~~~L~~~~~~---------~~~~~~~~-~~~~nPy~~~La~ad 230 (311)
T PF06258_consen 171 LDQLAALAAAYG-G----SLL-VTTSRRTPP----EAEAALRELLKD---------NPGVYIWD-GTGENPYLGFLAAAD 230 (311)
T ss_pred HHHHHHHHHhCC-C----eEE-EEcCCCCcH----HHHHHHHHhhcC---------CCceEEec-CCCCCcHHHHHHhCC
Confidence 677777777766 2 233 333334432 233344433321 11243333 333445889999999
Q ss_pred EEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC
Q 002314 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG 497 (937)
Q Consensus 462 v~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG 497 (937)
.+++|. |-.+++ .||++++ .||.+-+..+
T Consensus 231 ~i~VT~--DSvSMv-sEA~~tG----~pV~v~~l~~ 259 (311)
T PF06258_consen 231 AIVVTE--DSVSMV-SEAAATG----KPVYVLPLPG 259 (311)
T ss_pred EEEEcC--ccHHHH-HHHHHcC----CCEEEecCCC
Confidence 999996 666665 7999984 4555544444
No 320
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=36.09 E-value=68 Score=40.67 Aligned_cols=68 Identities=15% Similarity=0.184 Sum_probs=53.9
Q ss_pred HHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 583 ~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.+.....+.+++=+||+++-.-. ..-.+-+++.++|++|.+ .|..++++||........+...+++
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~-----------l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIA-----------LQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEE-----------EecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 4556667778889999999775321 123467899999999987 5999999999999999998888776
No 321
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=35.51 E-value=2.7e+02 Score=30.59 Aligned_cols=68 Identities=16% Similarity=0.192 Sum_probs=44.7
Q ss_pred CCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc------CC--ceEEECCC--CHHHH
Q 002314 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL------GA--GAILVNPW--NITEV 517 (937)
Q Consensus 448 v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l------g~--~gllVnP~--D~~~l 517 (937)
.+..++..++..||++|-. -|+|+ ..|+++++ .|+|+=-..|..|+. .. -|+.+++. +.+.+
T Consensus 239 ~~~~~~~~~m~~ad~vIs~---~G~~t-~~Ea~~~g----~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 239 FSTPDFAELMAAADLVISK---GGYTT-ISEALALG----KPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred cChHHHHHHHHhCCEEEEC---CCHHH-HHHHHHcC----CCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 4558899999999999976 46664 48999985 445544444555554 11 24454543 56788
Q ss_pred HHHHHH
Q 002314 518 ANAIAR 523 (937)
Q Consensus 518 A~aI~~ 523 (937)
+++|++
T Consensus 311 ~~~l~~ 316 (318)
T PF13528_consen 311 AEFLER 316 (318)
T ss_pred HHHHhc
Confidence 877764
No 322
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=34.38 E-value=66 Score=41.81 Aligned_cols=39 Identities=5% Similarity=0.307 Sum_probs=33.4
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
+-+++.++|++|.+ .|.+++++||............+++
T Consensus 538 lr~~v~e~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 538 PRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CchhHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHcCC
Confidence 67899999999986 6999999999999888887776554
No 323
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=34.26 E-value=38 Score=38.86 Aligned_cols=56 Identities=13% Similarity=0.283 Sum_probs=36.0
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG 647 (937)
-..+++.|||||||++... +.-..--+.+-..+.++...-|+.|.+ +|..++|-|-
T Consensus 73 ~~~K~i~FD~dgtlI~t~s--g~vf~~~~~dw~~l~~~vp~Klktl~~-~g~~l~iftn 128 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKS--GKVFPKGSMDWRILFPEVPSKLKTLYQ-DGIKLFIFTN 128 (422)
T ss_pred CCcceEEEecCCceeecCC--cceeeccCccceeeccccchhhhhhcc-CCeEEEEEec
Confidence 3568999999999998642 100000000223456677778889987 5999998774
No 324
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=34.17 E-value=3.2e+02 Score=34.35 Aligned_cols=194 Identities=13% Similarity=0.083 Sum_probs=113.4
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----C----CceEEECCCCHH
Q 002314 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----G----AGAILVNPWNIT 515 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g----~~gllVnP~D~~ 515 (937)
.+.++.+.....++.-+++++|.-|+-.=+.++|+-..+ .+-..+|++...-..+.+ + .-.++.-|+|+-
T Consensus 231 vgAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~-~~~a~lIlTgg~~~~~~v~~l~~~a~~~~ipVl~t~~dT~ 309 (684)
T PRK05632 231 VCARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG-PPIAGLLLTGGYEPDPRIAKLCEGAFETGLPVLSVDTNTY 309 (684)
T ss_pred EEecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC-CCceEEEEcCCCCCCHHHHHHHhhcccCCCCEEEecCCHH
Confidence 456677888888887778787788877667777762111 111246666433322222 1 123666799999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhhhhhhhcC-CHHHHHHHHHHHHHHhHHHhhhccccCCCCcchHHHHHHHHhcCCeEE
Q 002314 516 EVANAIARALNMSPEEREKRHWHNFTHVTTH-TAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLL 594 (937)
Q Consensus 516 ~lA~aI~~aL~m~~~er~~r~~~~~~~V~~~-~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~L~~~~~~~~y~~s~~rLI 594 (937)
+.|..|.++..--..+-.++.....+.+.+| |..+|.+. |.. . ..+...+.|..-...+++.-+..++|++
T Consensus 310 ~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~~----~---~~~~~~~~p~~~~~~l~~~a~~~~~~i~ 381 (684)
T PRK05632 310 QTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LTA----T---SERSRRLSPPAFRYQLTERARAAKKRIV 381 (684)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hcc----C---CCCCCCcCHHHHHHHHHHHHhcCCCEEE
Confidence 9999999776432222233456667777777 87777775 321 0 0112234454456667776666666665
Q ss_pred EEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEeeCceEEEe
Q 002314 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (937)
Q Consensus 595 ~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~~ir~ 674 (937)
|-. . -.++++++...+.+ .|..-.|.-|+. +.+++.+...++.+ . .+.+|.+
T Consensus 382 ~~e--------~----------------~d~~~l~Aa~~~~~-~g~~~~iLvG~~-~~I~~~~~~~~~~l-~-~~~~Ii~ 433 (684)
T PRK05632 382 LPE--------G----------------DEPRTLKAAAICLE-RGIADCVLLGNP-EEIRRVAAAQGVDL-P-AGIEIID 433 (684)
T ss_pred EeC--------C----------------CCHHHHHHHHHHHH-cCCceEEEECCH-HHHHHHHHHcCCCc-c-CCcEEEC
Confidence 522 1 13567777777665 466666666875 45666666554322 1 4566664
Q ss_pred c
Q 002314 675 T 675 (937)
Q Consensus 675 ~ 675 (937)
+
T Consensus 434 ~ 434 (684)
T PRK05632 434 P 434 (684)
T ss_pred C
Confidence 3
No 325
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=33.73 E-value=68 Score=40.09 Aligned_cols=72 Identities=10% Similarity=0.149 Sum_probs=55.3
Q ss_pred hHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
+....+.+++...+.+++-+|++++.... ..-.+-|++.+++++|.+ .|.+++++||-..........
T Consensus 414 ~~~~~~~~a~~G~r~l~va~~~~~lG~i~-----------l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 414 LDQAVDQVARQGGTPLVVCEDNRIYGVIY-----------LKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEE-----------ecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHH
Confidence 44555667777778888888988775421 112366899999999987 599999999999999988887
Q ss_pred ccCc
Q 002314 659 EYNL 662 (937)
Q Consensus 659 ~~~l 662 (937)
.+++
T Consensus 482 ~lGI 485 (675)
T TIGR01497 482 EAGV 485 (675)
T ss_pred HcCC
Confidence 7654
No 326
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=33.32 E-value=4.3e+02 Score=28.26 Aligned_cols=38 Identities=34% Similarity=0.386 Sum_probs=25.0
Q ss_pred ceEEEeCCCCcccccCCc----eEEECCCCHHHHHHHHHHHH
Q 002314 488 GVLILSEFAGAAQSLGAG----AILVNPWNITEVANAIARAL 525 (937)
Q Consensus 488 g~lVlSe~aG~~~~lg~~----gllVnP~D~~~lA~aI~~aL 525 (937)
.|++.-|-+|++--+|.+ .+=|+|.+-.++|.||+--+
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM 227 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM 227 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH
Confidence 566666655555544322 34578887789999988544
No 327
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=33.02 E-value=4.9e+02 Score=28.62 Aligned_cols=22 Identities=23% Similarity=0.370 Sum_probs=15.8
Q ss_pred HHHHHHhCCCCCEEEEeCcccc
Q 002314 222 ADVVNKHYKDGDVVWCHDYHLM 243 (937)
Q Consensus 222 A~~i~~~~~~~DvVwvHDyhl~ 243 (937)
.++|.+..+.-|+|-|-.||.-
T Consensus 56 r~~i~~~ak~a~VitISHYHYD 77 (304)
T COG2248 56 REKIQRYAKKADVITISHYHYD 77 (304)
T ss_pred HHHHHHHHhhCCEEEEeeeccc
Confidence 3556666667799999888853
No 328
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=33.00 E-value=3.8e+02 Score=28.93 Aligned_cols=112 Identities=18% Similarity=0.175 Sum_probs=65.3
Q ss_pred EEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 002314 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 444 (937)
Q Consensus 365 iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~ 444 (937)
++++-+|+...-=+.....-+..|+...| +|++| |+-+...+++.+.+...+...+++. . +..+
T Consensus 4 ll~s~~~~~~~~~l~~~~~~~~~~~~~~~----~v~fI----PtAs~~~~~~~y~~~~~~af~~lG~-------~-v~~l 67 (233)
T PRK05282 4 LLLSNSTLPGTGYLEHALPLIAELLAGRR----KAVFI----PYAGVTQSWDDYTAKVAEALAPLGI-------E-VTGI 67 (233)
T ss_pred EEEecCCCCCCchHHHHHHHHHHHHcCCC----eEEEE----CCCCCCCCHHHHHHHHHHHHHHCCC-------E-EEEe
Confidence 56677787764334666666677766332 35454 4444434455555555555555442 2 3333
Q ss_pred CCCCCHHHHHHHHHHccEEEECCC----------CcCCChhHHHHHHhcCCCCceEEEeCCCCccc
Q 002314 445 DRSLDFPALCALYAVTDVALVTSL----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 500 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl----------~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~ 500 (937)
.. .++..+.+..||+..++-= .-|+--.+.|++.. |.+++-..||+.-
T Consensus 68 ~~---~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~-----G~~~~G~SAGAii 125 (233)
T PRK05282 68 HR---VADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAVKN-----GTPYIGWSAGANV 125 (233)
T ss_pred cc---chhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHHHC-----CCEEEEECHHHHh
Confidence 32 2455677899998877642 12444456787654 6778888888753
No 329
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=32.85 E-value=6.1e+02 Score=28.03 Aligned_cols=24 Identities=17% Similarity=0.209 Sum_probs=20.8
Q ss_pred eCCCCCHHHHHHHHHHccEEEECC
Q 002314 444 LDRSLDFPALCALYAVTDVALVTS 467 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~S 467 (937)
+.+..+..|+.++++.||++|-+-
T Consensus 239 l~g~~sL~el~ali~~a~l~I~~D 262 (319)
T TIGR02193 239 VLPKMSLAEVAALLAGADAVVGVD 262 (319)
T ss_pred ecCCCCHHHHHHHHHcCCEEEeCC
Confidence 357889999999999999999763
No 330
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=32.78 E-value=42 Score=32.85 Aligned_cols=41 Identities=20% Similarity=0.390 Sum_probs=34.3
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
..+.+.+.++|++|.+ .+..++|+|+.+...++..+..+++
T Consensus 76 ~~~~~~~~~~L~~l~~-~~~~~~i~Sn~~~~~~~~~l~~~~~ 116 (176)
T PF13419_consen 76 LQPYPGVRELLERLKA-KGIPLVIVSNGSRERIERVLERLGL 116 (176)
T ss_dssp EEESTTHHHHHHHHHH-TTSEEEEEESSEHHHHHHHHHHTTH
T ss_pred cchhhhhhhhhhhccc-ccceeEEeecCCccccccccccccc
Confidence 3466789999999986 4999999999999988888877643
No 331
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=32.70 E-value=1e+02 Score=28.82 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=26.7
Q ss_pred HHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHH
Q 002314 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 417 (937)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~ 417 (937)
..|...++++++.+|+.+ +|.||..+..|.+-|.+
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAE 83 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHH
Confidence 588889999999999876 77788766666555543
No 332
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=32.63 E-value=27 Score=40.47 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=44.9
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccccc--ccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceEEe
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREM--ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAA 666 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~--~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~lia 666 (937)
...+++++|+|||++.... -| .+..+ .---+..+..+-.++.+ .|..|.-.|.|++..+...-. .+..|+
T Consensus 373 ~n~kiVVsDiDGTITkSD~-~G----hv~~miGkdwth~gVAkLYtdI~r-NGYkI~YltsR~~Gqa~sTrs--ylrnie 444 (580)
T COG5083 373 NNKKIVVSDIDGTITKSDA-LG----HVKQMIGKDWTHNGVAKLYTDIDR-NGYKIKYLTSRSYGQADSTRS--YLRNIE 444 (580)
T ss_pred CCCcEEEEecCCcEEehhh-HH----HHHHHhccchhhcchhhhhhhhcc-CceEEEEEecccccchhhhhh--HHHhhh
Confidence 5678999999999996521 00 00000 00122344455555554 477888899998877643322 245677
Q ss_pred eCceEEE
Q 002314 667 ENGMFLR 673 (937)
Q Consensus 667 enG~~ir 673 (937)
+||+.+-
T Consensus 445 QngykLp 451 (580)
T COG5083 445 QNGYKLP 451 (580)
T ss_pred hcCccCC
Confidence 8887653
No 333
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=32.02 E-value=1.1e+02 Score=34.26 Aligned_cols=69 Identities=17% Similarity=0.188 Sum_probs=46.2
Q ss_pred HHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccc------c-C-CceEEECCCCHHHHHHHHH
Q 002314 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS------L-G-AGAILVNPWNITEVANAIA 522 (937)
Q Consensus 451 ~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~------l-g-~~gllVnP~D~~~lA~aI~ 522 (937)
+++.++|..||++|.-+ |++ +..|+++++ .|+|+.-..|-.++ + . ..|+.++..+. ++.+++.
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g----~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~ 309 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSLG----KPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAIL 309 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHcC----CCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHH
Confidence 78999999999999876 555 478999995 56666666554343 2 1 23677776666 4555555
Q ss_pred HHHcCC
Q 002314 523 RALNMS 528 (937)
Q Consensus 523 ~aL~m~ 528 (937)
..++++
T Consensus 310 ~~~~~~ 315 (321)
T TIGR00661 310 DIRNMK 315 (321)
T ss_pred hccccc
Confidence 555443
No 334
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=31.84 E-value=4.2e+02 Score=32.05 Aligned_cols=76 Identities=8% Similarity=0.042 Sum_probs=47.2
Q ss_pred eCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCC----ccccc-C-CceEEECC--CCHH
Q 002314 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL-G-AGAILVNP--WNIT 515 (937)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG----~~~~l-g-~~gllVnP--~D~~ 515 (937)
+.+.+++.++.+- ..+++|| ..-|+|- ..||+.++ .|+|+--..+ -+..+ . ..|+.+++ .+.+
T Consensus 350 i~~w~Pq~~lL~h-p~v~~fI---tHGG~~s-~~Eal~~G----vP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~ 420 (507)
T PHA03392 350 TQKWFPQRAVLKH-KNVKAFV---TQGGVQS-TDEAIDAL----VPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAA 420 (507)
T ss_pred EecCCCHHHHhcC-CCCCEEE---ecCCccc-HHHHHHcC----CCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHH
Confidence 4678888765432 4577777 3567654 58999984 4444432221 11111 1 13677765 4678
Q ss_pred HHHHHHHHHHcCC
Q 002314 516 EVANAIARALNMS 528 (937)
Q Consensus 516 ~lA~aI~~aL~m~ 528 (937)
++++||.++|+.+
T Consensus 421 ~l~~ai~~vl~~~ 433 (507)
T PHA03392 421 QLVLAIVDVIENP 433 (507)
T ss_pred HHHHHHHHHhCCH
Confidence 9999999999875
No 335
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=31.75 E-value=96 Score=31.28 Aligned_cols=76 Identities=20% Similarity=0.259 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHc---cEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHH
Q 002314 449 DFPALCALYAVT---DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANA 520 (937)
Q Consensus 449 ~~~el~aly~~A---Dv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA~a 520 (937)
+.+|-.+..+.+ -.+|---+-+|=||.+.|++.....+-..+|++-++.++--+ |..-++.-|-|.+++..|
T Consensus 41 ~~~eal~~art~~PayAvvDlkL~~gsGL~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aA 120 (182)
T COG4567 41 SVEEALAAARTAPPAYAVVDLKLGDGSGLAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAA 120 (182)
T ss_pred cHHHHHHHHhcCCCceEEEEeeecCCCchHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHH
Confidence 345555554432 233444456899999999999877777799999998887655 556689999999999999
Q ss_pred HHHH
Q 002314 521 IARA 524 (937)
Q Consensus 521 I~~a 524 (937)
+.+.
T Consensus 121 l~~~ 124 (182)
T COG4567 121 LLRR 124 (182)
T ss_pred Hhhc
Confidence 8876
No 336
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=31.46 E-value=83 Score=32.06 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=32.6
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
+-|.+.+.|+.|.+ .|..++|+||.....++.++..+++
T Consensus 81 ~~~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g~ 119 (201)
T TIGR01491 81 LRDYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLNP 119 (201)
T ss_pred CCccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhCC
Confidence 44678999999986 5999999999999989888877654
No 337
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=30.79 E-value=1.7e+02 Score=35.54 Aligned_cols=82 Identities=21% Similarity=0.080 Sum_probs=57.6
Q ss_pred CCCCCHHHHHHHHHHccEEE-ECCCCcCCChhHHHHHHhcC--------------------CCCc-eEEEeCCCCccccc
Q 002314 445 DRSLDFPALCALYAVTDVAL-VTSLRDGMNLVSYEFVACQD--------------------LKKG-VLILSEFAGAAQSL 502 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~v-v~Sl~EG~nLv~~EamAc~~--------------------~~~g-~lVlSe~aG~~~~l 502 (937)
.|.++..|+..+++.|-||| +-.-+|| =.++||+|.+. +++. -=+.|....+...+
T Consensus 327 HG~l~~~ef~~lL~~akvfiGlGfP~Eg--PaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKVFIGLGFPYEG--PAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred cCcCCHHHHHHHHHhhhEeeecCCCCCC--CChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 57789999999999999999 3444663 47899999860 0000 11233333222234
Q ss_pred C-CceEEECCCCHHHHHHHHHHHHcCC
Q 002314 503 G-AGAILVNPWNITEVANAIARALNMS 528 (937)
Q Consensus 503 g-~~gllVnP~D~~~lA~aI~~aL~m~ 528 (937)
| ..-+.|+-.|.+++-+||+++|.++
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 4 3578899999999999999999875
No 338
>PRK09449 dUMP phosphatase; Provisional
Probab=30.63 E-value=1.6e+02 Score=30.77 Aligned_cols=17 Identities=18% Similarity=0.253 Sum_probs=14.2
Q ss_pred ccceeeCCHHHHHHHHH
Q 002314 905 NARFLLQSSDEVVSFLK 921 (937)
Q Consensus 905 ~A~y~l~~~~~V~~~L~ 921 (937)
.+.|.+++..++..+|+
T Consensus 207 ~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 207 APTYQVSSLSELEQLLC 223 (224)
T ss_pred CCeEEECCHHHHHHHHh
Confidence 47899999999988775
No 339
>PLN03007 UDP-glucosyltransferase family protein
Probab=30.20 E-value=7.7e+02 Score=29.51 Aligned_cols=73 Identities=16% Similarity=0.101 Sum_probs=42.8
Q ss_pred CCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEe------CCCCcc---cccCCceEEEC-----
Q 002314 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS------EFAGAA---QSLGAGAILVN----- 510 (937)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlS------e~aG~~---~~lg~~gllVn----- 510 (937)
.+.+++.+ ++..+++.++=+ .-|+|- .+|++++ |++++. .+..+. +.+ .-|+-+.
T Consensus 350 ~~w~PQ~~---iL~h~~v~~fvt-H~G~nS-~~Eal~~-----GVP~v~~P~~~DQ~~na~~~~~~~-~~G~~~~~~~~~ 418 (482)
T PLN03007 350 RGWAPQVL---ILDHQATGGFVT-HCGWNS-LLEGVAA-----GLPMVTWPVGAEQFYNEKLVTQVL-RTGVSVGAKKLV 418 (482)
T ss_pred ecCCCHHH---HhccCccceeee-cCcchH-HHHHHHc-----CCCeeeccchhhhhhhHHHHHHhh-cceeEecccccc
Confidence 57788865 455566533322 578774 5899998 444433 222222 222 2233331
Q ss_pred -----CCCHHHHHHHHHHHHcCC
Q 002314 511 -----PWNITEVANAIARALNMS 528 (937)
Q Consensus 511 -----P~D~~~lA~aI~~aL~m~ 528 (937)
-.+.++++++|++++..+
T Consensus 419 ~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 419 KVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred ccccCcccHHHHHHHHHHHhcCc
Confidence 137789999999999765
No 340
>COG4996 Predicted phosphatase [General function prediction only]
Probab=30.16 E-value=73 Score=31.20 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=13.5
Q ss_pred eEEEEecCcccCCCCC
Q 002314 592 RLLILGFNATLTEPVD 607 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~ 607 (937)
++|+||.||||.+..+
T Consensus 1 ~~i~~d~d~t~wdhh~ 16 (164)
T COG4996 1 RAIVFDADKTLWDHHN 16 (164)
T ss_pred CcEEEeCCCccccccc
Confidence 5799999999998653
No 341
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=30.15 E-value=1e+02 Score=33.08 Aligned_cols=37 Identities=8% Similarity=-0.157 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+-..+...+++++. .+++.+++||| ..+|..+=+.++
T Consensus 158 ~p~~~~~a~~~l~~-----~~~~~~l~IGD-s~~Di~aA~~aG 194 (253)
T TIGR01422 158 APWMALKNAIELGV-----YDVAACVKVGD-TVPDIEEGRNAG 194 (253)
T ss_pred CHHHHHHHHHHcCC-----CCchheEEECC-cHHHHHHHHHCC
Confidence 34567788888872 13788999999 888876655554
No 342
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=29.70 E-value=2.4e+02 Score=34.10 Aligned_cols=239 Identities=17% Similarity=0.173 Sum_probs=128.0
Q ss_pred cEEEEEecccccCCHHHHHHHHHHhHH-hCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 002314 364 KVMLGVDRLDMIKGIPQKLLAFEKFLE-ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (937)
Q Consensus 364 ~iIL~VdRld~~KGi~~~l~Af~~ll~-~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (937)
+=++++++.---|-+.++|-|+..+.. ....-+++---++|..|+| +|..||.+.+.++....+ ..-+.
T Consensus 129 rD~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PTR-------ELA~QV~~~~~~~~~~~~---~~~~c 198 (519)
T KOG0331|consen 129 RDLVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPTR-------ELAVQVQAEAREFGKSLR---LRSTC 198 (519)
T ss_pred CceEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEEEcCcH-------HHHHHHHHHHHHHcCCCC---ccEEE
Confidence 447889999999999999999999987 3333333332333445775 677888877777665443 12233
Q ss_pred EeCCCCCHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCH---HHHHH
Q 002314 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI---TEVAN 519 (937)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~---~~lA~ 519 (937)
.+.|.--..++..|-+.+||++-|+-| .++-|-+ +.+-+|... -++.+--|. ..+..
T Consensus 199 vyGG~~~~~Q~~~l~~gvdiviaTPGR------l~d~le~-----g~~~l~~v~---------ylVLDEADrMldmGFe~ 258 (519)
T KOG0331|consen 199 VYGGAPKGPQLRDLERGVDVVIATPGR------LIDLLEE-----GSLNLSRVT---------YLVLDEADRMLDMGFEP 258 (519)
T ss_pred EeCCCCccHHHHHHhcCCcEEEeCChH------HHHHHHc-----CCcccccee---------EEEeccHHhhhccccHH
Confidence 334444468899999999999999843 3455544 333333211 111111110 12455
Q ss_pred HHHHHHcCC-HHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHhHHHhhhccccCCCCcchHHHHHHHHhcCCeEEEEec
Q 002314 520 AIARALNMS-PEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGF 598 (937)
Q Consensus 520 aI~~aL~m~-~~er~~r~~~~~~~V~~~~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~L~~~~~~~~y~~s~~rLI~lD~ 598 (937)
.|+.+|.-- ...| ...+..-+|..|++.+-.++-.-.. +..+.. .+ ..+ ++...+=|+..+
T Consensus 259 qI~~Il~~i~~~~r-------Qtlm~saTwp~~v~~lA~~fl~~~~--~i~ig~------~~-~~~--a~~~i~qive~~ 320 (519)
T KOG0331|consen 259 QIRKILSQIPRPDR-------QTLMFSATWPKEVRQLAEDFLNNPI--QINVGN------KK-ELK--ANHNIRQIVEVC 320 (519)
T ss_pred HHHHHHHhcCCCcc-------cEEEEeeeccHHHHHHHHHHhcCce--EEEecc------hh-hhh--hhcchhhhhhhc
Confidence 555555422 1111 1233556788887766544433110 000000 00 000 011111111122
Q ss_pred CcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCC--CCeEEEEcCCChhhHHHHhcccCceEEeeCce
Q 002314 599 NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP--KTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (937)
Q Consensus 599 DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~--g~~V~IvSGR~~~~L~~~~~~~~l~liaenG~ 670 (937)
|. ..-...+.+.|+....++ ++.|++-|=|..+.|...+...+...+|-||-
T Consensus 321 ~~--------------------~~K~~~l~~lL~~~~~~~~~KvIIFc~tkr~~~~l~~~l~~~~~~a~~iHGd 374 (519)
T KOG0331|consen 321 DE--------------------TAKLRKLGKLLEDISSDSEGKVIIFCETKRTCDELARNLRRKGWPAVAIHGD 374 (519)
T ss_pred CH--------------------HHHHHHHHHHHHHHhccCCCcEEEEecchhhHHHHHHHHHhcCcceeeeccc
Confidence 20 011234566666665334 45566677888888988888766777787774
No 343
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=29.62 E-value=2.2e+02 Score=27.77 Aligned_cols=71 Identities=24% Similarity=0.335 Sum_probs=49.5
Q ss_pred HHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 002314 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (937)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (937)
..+..+..+.+++. +..+.||.|-..++.+ ......+++.++++..+|+ .||+++....+-.+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 55677777777764 3356789887666543 3455677788888877775 489999888887776666665
Q ss_pred c
Q 002314 460 T 460 (937)
Q Consensus 460 A 460 (937)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 344
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=29.49 E-value=99 Score=32.81 Aligned_cols=16 Identities=19% Similarity=0.356 Sum_probs=14.1
Q ss_pred CCeEEEEecCcccCCC
Q 002314 590 NNRLLILGFNATLTEP 605 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~ 605 (937)
+.++|+||+||||++.
T Consensus 9 ~~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 9 DVDTVLLDMDGTLLDL 24 (224)
T ss_pred cCCEEEEcCCCCccch
Confidence 4689999999999985
No 345
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=29.33 E-value=1.2e+02 Score=31.69 Aligned_cols=38 Identities=13% Similarity=-0.027 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
+...+..++++++. .+++.+++||| ..+|..+=+.++-
T Consensus 147 ~p~~~~~a~~~~~~-----~~~~~~~~igD-~~~Di~aa~~aG~ 184 (220)
T TIGR03351 147 APDLILRAMELTGV-----QDVQSVAVAGD-TPNDLEAGINAGA 184 (220)
T ss_pred CHHHHHHHHHHcCC-----CChhHeEEeCC-CHHHHHHHHHCCC
Confidence 66788899999873 13689999999 9999877666653
No 346
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=29.23 E-value=44 Score=37.37 Aligned_cols=41 Identities=15% Similarity=0.177 Sum_probs=29.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCC---CeEEEEc
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK---TTIVVLS 646 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g---~~V~IvS 646 (937)
.--|+||+||.|+-- ..+-++..++|+.|..++| +.++++|
T Consensus 35 ~fgfafDIDGVL~RG---------------~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFRG---------------HRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred ceeEEEecccEEEec---------------CCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 346999999999953 3456788999999987543 4455554
No 347
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=28.81 E-value=8.8e+02 Score=27.31 Aligned_cols=111 Identities=17% Similarity=0.096 Sum_probs=59.4
Q ss_pred cCCcEEEEEecccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCCCChh---HHHHHHHHHHHHHHHhhcccCCCC
Q 002314 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP---EYQRLTSQVHEIVGRINGRFGTLT 437 (937)
Q Consensus 361 ~~~~iIL~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~---~y~~l~~~l~~lv~~IN~~~g~~~ 437 (937)
.+..+|...|-+.+..--. +-+|-+.+..+.+.+....+.|+||++++.-.- ....+.++|.+++.. +| ..
T Consensus 111 ~~~Nvl~t~ga~~~i~~~~-l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~----~~-~~ 184 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITPER-LAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAA----YG-GS 184 (311)
T ss_pred CCCceEecccCCCcCCHHH-HHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHh----CC-Ce
Confidence 3567888888777665432 334445555555556566778889987754321 223455555555544 22 11
Q ss_pred cccEEEeCCCCCHHHHHHHHHHc---c-EEEECCCCcCCChhHHHHHHh
Q 002314 438 AVPIHHLDRSLDFPALCALYAVT---D-VALVTSLRDGMNLVSYEFVAC 482 (937)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~A---D-v~vv~Sl~EG~nLv~~EamAc 482 (937)
| -|. ..+.-+.+-..+|-... + +.+. -.+|-| ...+++++
T Consensus 185 ~-~vt-tSRRTp~~~~~~L~~~~~~~~~~~~~--~~~~~n-Py~~~La~ 228 (311)
T PF06258_consen 185 L-LVT-TSRRTPPEAEAALRELLKDNPGVYIW--DGTGEN-PYLGFLAA 228 (311)
T ss_pred E-EEE-cCCCCcHHHHHHHHHhhcCCCceEEe--cCCCCC-cHHHHHHh
Confidence 1 122 23444444444444444 2 3244 456766 46678877
No 348
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=28.31 E-value=2.1e+02 Score=37.37 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=32.3
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
|-++++++++.|.+ .|++|+++||-........-.+++
T Consensus 548 pr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~G 585 (917)
T COG0474 548 PREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECG 585 (917)
T ss_pred CCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHcC
Confidence 55789999999887 599999999999988887776655
No 349
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=27.80 E-value=71 Score=33.04 Aligned_cols=40 Identities=13% Similarity=0.193 Sum_probs=33.3
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+.+.+.+.|+.|.+ .|..++|+||.+...+...+..+++
T Consensus 75 ~~~~g~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~~l 114 (205)
T TIGR01454 75 EVFPGVPELLAELRA-DGVGTAIATGKSGPRARSLLEALGL 114 (205)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHcCC
Confidence 356789999999987 4899999999999888887776654
No 350
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=27.67 E-value=66 Score=30.70 Aligned_cols=37 Identities=11% Similarity=-0.032 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHh-cccccCCCCCceEEEEecCC-CCcHHHHHhcC
Q 002314 768 TKGAAIDRILAEI-VHSKKMKTAIDYVLCIGHFL-GKDEDVYAFFE 811 (937)
Q Consensus 768 nKG~Av~~Ll~~l-~~~~~~~~~~d~vl~iGD~d-~nDEdMf~~~~ 811 (937)
.|..+++.+++++ + .+++.+++||| . .+|..+=+.++
T Consensus 86 P~~~~~~~~~~~~~~------~~~~~~v~IGD-~~~~Di~~A~~~G 124 (132)
T TIGR01662 86 PKPGMFLEALKRFNE------IDPEESVYVGD-QDLTDLQAAKRAG 124 (132)
T ss_pred CChHHHHHHHHHcCC------CChhheEEEcC-CCcccHHHHHHCC
Confidence 3678899999998 4 46899999999 5 78877766664
No 351
>PLN02645 phosphoglycolate phosphatase
Probab=27.24 E-value=1.5e+02 Score=33.12 Aligned_cols=36 Identities=8% Similarity=-0.119 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCC-CcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~-nDEdMf~~~~ 811 (937)
+-..++.++++++ .+++.+++||| .. +|+.+=+.++
T Consensus 232 ~p~~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~A~~aG 268 (311)
T PLN02645 232 STFMMDYLANKFG------IEKSQICMVGD-RLDTDILFGQNGG 268 (311)
T ss_pred hHHHHHHHHHHcC------CCcccEEEEcC-CcHHHHHHHHHcC
Confidence 3345667777777 46789999999 86 8887765554
No 352
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=27.09 E-value=3.3e+02 Score=28.11 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=49.5
Q ss_pred CHHHHHHHHH--HccEEEECCCCcC----CChhHHHHHHhcCCCCceEEEeCCCCccc--c-c--CCceEEECCCCHHHH
Q 002314 449 DFPALCALYA--VTDVALVTSLRDG----MNLVSYEFVACQDLKKGVLILSEFAGAAQ--S-L--GAGAILVNPWNITEV 517 (937)
Q Consensus 449 ~~~el~aly~--~ADv~vv~Sl~EG----~nLv~~EamAc~~~~~g~lVlSe~aG~~~--~-l--g~~gllVnP~D~~~l 517 (937)
+.++....+. ..|++++-....+ -|+..++.+........++++|....... . + |..|++..|.+.+++
T Consensus 37 ~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l 116 (216)
T PRK10840 37 DSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 (216)
T ss_pred CHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 3455555544 3688887543333 46666666653222234667776654332 1 2 778999999999999
Q ss_pred HHHHHHHHc
Q 002314 518 ANAIARALN 526 (937)
Q Consensus 518 A~aI~~aL~ 526 (937)
.++|..++.
T Consensus 117 ~~ai~~v~~ 125 (216)
T PRK10840 117 PKALAALQK 125 (216)
T ss_pred HHHHHHHHC
Confidence 999998875
No 353
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=26.93 E-value=96 Score=31.45 Aligned_cols=36 Identities=11% Similarity=0.017 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
+-..+...+++++ .+++.+++||| ..+|..+=+.++
T Consensus 108 ~p~~~~~a~~~~~------~~~~~~v~VGD-s~~Di~aA~~aG 143 (176)
T TIGR00213 108 KPGMLLQARKELH------IDMAQSYMVGD-KLEDMQAGVAAK 143 (176)
T ss_pred CHHHHHHHHHHcC------cChhhEEEEcC-CHHHHHHHHHCC
Confidence 4556788888887 56899999999 888877655554
No 354
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=26.85 E-value=1.4e+02 Score=35.47 Aligned_cols=34 Identities=18% Similarity=0.085 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
|-..+..+++.++ ++.+++||| ..+|..+-+.++
T Consensus 387 kP~~~~~al~~l~--------~~~~v~VGD-s~~Di~aAk~AG 420 (459)
T PRK06698 387 KSDLVKSILNKYD--------IKEAAVVGD-RLSDINAAKDNG 420 (459)
T ss_pred CcHHHHHHHHhcC--------cceEEEEeC-CHHHHHHHHHCC
Confidence 5567777777654 578999999 998887776664
No 355
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=26.79 E-value=8e+02 Score=27.94 Aligned_cols=70 Identities=13% Similarity=0.182 Sum_probs=45.4
Q ss_pred HHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCc---cccc-------CC-ceEEECC--CCHHHH
Q 002314 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA---AQSL-------GA-GAILVNP--WNITEV 517 (937)
Q Consensus 451 ~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~---~~~l-------g~-~gllVnP--~D~~~l 517 (937)
+++..+|+.||++|.-+ =+.+..|+++++ .|.|+--+... .++. .. .|..+.. .+.+.+
T Consensus 244 ~~m~~~~~~adlvIsr~----G~~t~~E~~~~g----~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l 315 (352)
T PRK12446 244 GELPDILAITDFVISRA----GSNAIFEFLTLQ----KPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSL 315 (352)
T ss_pred hhHHHHHHhCCEEEECC----ChhHHHHHHHcC----CCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHH
Confidence 57889999999888643 246779999995 45555433211 1222 12 2444433 357899
Q ss_pred HHHHHHHHcCC
Q 002314 518 ANAIARALNMS 528 (937)
Q Consensus 518 A~aI~~aL~m~ 528 (937)
+++|.++++++
T Consensus 316 ~~~l~~ll~~~ 326 (352)
T PRK12446 316 IKHVEELSHNN 326 (352)
T ss_pred HHHHHHHHcCH
Confidence 99999998764
No 356
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=26.67 E-value=41 Score=44.34 Aligned_cols=35 Identities=3% Similarity=0.129 Sum_probs=0.0
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeE
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTI 642 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V 642 (937)
+.++++||+||||++. .+...+++.++.++.|..+
T Consensus 74 ~ikaVIFDlDGTLiDS------------------~~~~~~a~~~~~~~~G~~i 108 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNS------------------EEPSRRAAVDVFAEMGVEV 108 (1057)
T ss_pred CCCEEEECCCCCeEeC------------------hHHHHHHHHHHHHHcCCCC
No 357
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=26.65 E-value=60 Score=35.98 Aligned_cols=61 Identities=18% Similarity=0.048 Sum_probs=37.9
Q ss_pred CeEEEEecCcccCCCCCCCCCCCccc---cccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002314 591 NRLLILGFNATLTEPVDTPGRRGDQI---REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (937)
Q Consensus 591 ~rLI~lD~DGTL~~~~~~P~~~~~~~---~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 652 (937)
+-.|+.|||.||+......|.+..+. -+....++++..+-+++|.+ .-..+=+-+.-+.++
T Consensus 22 ~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~-~Y~PiE~d~~~~~~e 85 (277)
T TIGR01544 22 KLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKE-KYYPIEVDPVLTVEE 85 (277)
T ss_pred heEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHh-hccceecCCCCChHH
Confidence 44699999999998864333222111 12345678888888888875 355555555555543
No 358
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=26.60 E-value=77 Score=32.76 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=33.3
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+-|.+.++|+.|.+ .|.+++|+|+.+...++.++..+++
T Consensus 85 ~~~~g~~~~L~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l 124 (213)
T TIGR01449 85 SVFPGVEATLGALRA-KGLRLGLVTNKPTPLARPLLELLGL 124 (213)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCc
Confidence 355788999999986 5899999999999989888887653
No 359
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=26.49 E-value=44 Score=33.76 Aligned_cols=37 Identities=14% Similarity=0.052 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
|-..+..+++.++ ++++++++||| ..+|.++-+.++-
T Consensus 105 ~~~~~~~~~~~~~------~~~~e~l~IGD-~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKNL------IDKARSYVIGD-RETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHcC------CCHHHeEEEeC-CHHHHHHHHHCCC
Confidence 4566788888887 56899999999 9999888777654
No 360
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=26.45 E-value=46 Score=34.75 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=30.6
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.+--|+.+|..+.+ + .+...++++|| +.||.+|..-+..
T Consensus 156 dsggKa~~i~~lrk--~------~~~~~~~mvGD-GatDlea~~pa~a 194 (227)
T KOG1615|consen 156 DSGGKAEVIALLRK--N------YNYKTIVMVGD-GATDLEAMPPADA 194 (227)
T ss_pred cCCccHHHHHHHHh--C------CChheeEEecC-CccccccCCchhh
Confidence 44479999998887 3 35778999999 9999988765444
No 361
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=26.27 E-value=5.8e+02 Score=28.27 Aligned_cols=33 Identities=18% Similarity=0.051 Sum_probs=26.2
Q ss_pred CCCEEEEeCcccchHHHHHHhhCCCCeEEEEEc
Q 002314 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLH 263 (937)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~I~~flH 263 (937)
++|+|.-......++..+|++++.+.+++.-+|
T Consensus 70 ~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~ 102 (329)
T COG3660 70 RPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQD 102 (329)
T ss_pred CCceEEecccchhHHHHHHHHhcCCceEEEeeC
Confidence 479988899999999999999987765554433
No 362
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=25.94 E-value=1.2e+02 Score=33.86 Aligned_cols=129 Identities=18% Similarity=0.244 Sum_probs=80.4
Q ss_pred ccCCcEEEEeCCCCCCCc-hhhHHHHHhhcCceEEEEecChhhhhhhhhhhhhhccccccCCC---CCCccccccccchh
Q 002314 132 KEFEARWIGWAGVNVPDE-IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL---GLPQEDRLATTRSF 207 (937)
Q Consensus 132 ~~~~~~Wvgw~g~~~~~~-~~~~~~~~~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~---~~~~~~~~~~~~~~ 207 (937)
....-.++|+......+. ....++++...++.++.|-+.+.....+.+ ..-|||+|... +.+..-. .....
T Consensus 94 ~~~pdrf~~~~~v~p~~~~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~---~~~~~pi~~~a~~~gvpv~ih--tG~~~ 168 (293)
T COG2159 94 AEYPDRFVGFARVDPRDPEAAAEELERRVRELGFVGVKLHPVAQGFYPD---DPRLYPIYEAAEELGVPVVIH--TGAGP 168 (293)
T ss_pred hhCCcceeeeeeeCCCchHHHHHHHHHHHHhcCceEEEecccccCCCCC---ChHHHHHHHHHHHcCCCEEEE--eCCCC
Confidence 567888999887665543 233456677777888888876655443332 34478877654 1111000 00000
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhCCCCCEEEEeC---cccchHHHHHHhhCCCCeEEEEEccCC
Q 002314 208 Q-SQFAAYIKANQMFADVVNKHYKDGDVVWCHD---YHLMFLPKCLKEYNSDMKVGWFLHTPF 266 (937)
Q Consensus 208 ~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHD---yhl~llp~~Lr~~~~~~~I~~flH~Pf 266 (937)
. ..+..+ ..|..+.+-|...+-.-.||..|- |..++-...+....+++.+-++...|+
T Consensus 169 ~~~~~~~~-~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~~~a~~~~nvy~d~s~~~~~ 230 (293)
T COG2159 169 GGAGLEKG-HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEAIELAYAHPNVYLDTSGVRPK 230 (293)
T ss_pred CCcccccC-CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHHHHHHHhCCCceeeeeccccc
Confidence 0 011222 577888888888888788999987 666666667777888998888777763
No 363
>PLN03190 aminophospholipid translocase; Provisional
Probab=25.58 E-value=50 Score=44.04 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=29.7
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
.+-+++.++|++|.+ .|..|+++||-...........
T Consensus 726 ~lr~~v~~~I~~l~~-agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 726 KLQQGVPEAIESLRT-AGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHH
Confidence 366789999999987 5999999999988876655443
No 364
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=24.95 E-value=1.2e+02 Score=29.68 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=44.7
Q ss_pred eEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhH-HHHhccc
Q 002314 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL-DKNFQEY 660 (937)
Q Consensus 592 rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L-~~~~~~~ 660 (937)
+++-+|+|+|+-|....+++. ......-+.....|..|.+ .|++++++|--.-..+ .+.+..+
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~-----g~e~~fY~Di~rIL~dLk~-~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSK-----GEEMIFYDDIRRILVDLKK-LGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred EEEEecccccccccccCcccC-----cceeeeccchhHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHHh
Confidence 688899999999987776521 1334456788899999986 6999999986654443 4444443
No 365
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=24.48 E-value=3e+02 Score=27.11 Aligned_cols=70 Identities=24% Similarity=0.317 Sum_probs=46.3
Q ss_pred HHHHHHHhHHhCcCccCcEEEEEEEcCCCCChhHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 002314 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (937)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r~~~~~y~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (937)
.+..+..+.++++ +..+.||.|...++.+ ......+++.+.++..+|+ .||+++....+-.+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHc
Confidence 3566666666653 4467789887655543 3445667777777766664 4899999888877766666544
No 366
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=24.34 E-value=89 Score=34.84 Aligned_cols=55 Identities=13% Similarity=0.196 Sum_probs=38.9
Q ss_pred CCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 590 ~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
+.-.|+||.||.|..- .. +-|.+.++|..|.+. |..++++|-.+....+.++...
T Consensus 21 ~~DtfifDcDGVlW~g-~~--------------~ipGs~e~l~~L~~~-gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWLG-EK--------------PIPGSPEALNLLKSL-GKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred hcCEEEEcCCcceeec-CC--------------CCCChHHHHHHHHHc-CCcEEEEeCCCcchHHHHHHHH
Confidence 3457999999999973 22 335677777777764 6788888877776666665543
No 367
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=23.97 E-value=3.6e+02 Score=30.41 Aligned_cols=51 Identities=6% Similarity=0.175 Sum_probs=30.0
Q ss_pred HHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCC
Q 002314 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (937)
Q Consensus 582 ~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR 648 (937)
+...++....+..++|..|-.... .......+.+.+..+. +...|.|++|-
T Consensus 148 ~a~~L~~~Gi~A~~vD~~~~~~~~--------------~~t~~~~i~~~~~~~~--~~~~v~IvtGF 198 (304)
T cd04248 148 TALLLQNRGVNARFVDLSGWRDSG--------------DMTLDERISEAFRDID--PRDELPIVTGY 198 (304)
T ss_pred HHHHHHHCCCCeEEECcccccccC--------------CCCcHHHHHHHHHhhc--cCCcEEEeCCc
Confidence 344455566788899988654321 1112345566666542 35679999994
No 368
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=23.71 E-value=61 Score=33.08 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=26.9
Q ss_pred HHhhhcCCEEEEeCHHHHHHHHHHHHHHhC
Q 002314 282 LRAVLAADLVGFHTYDYARHFVSACTRILG 311 (937)
Q Consensus 282 l~~ll~aDlIgF~t~~~~~~Fl~~~~r~lg 311 (937)
+-+-|.||.|.|.+.-.++.|++.+..+|.
T Consensus 114 i~saLaAD~v~FNS~~nr~sFL~~~~~fL~ 143 (168)
T PF12038_consen 114 IYSALAADRVVFNSAFNRDSFLDGIPSFLK 143 (168)
T ss_pred HHHHHhceeeeecchhhHHHHHHHHHHHHH
Confidence 556789999999999999999999998875
No 369
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=23.68 E-value=1.4e+02 Score=37.48 Aligned_cols=72 Identities=11% Similarity=0.166 Sum_probs=54.5
Q ss_pred hHHHHHHHHhcCCeEEEEecCcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhc
Q 002314 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (937)
Q Consensus 579 ~~~~~~~y~~s~~rLI~lD~DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~ 658 (937)
+....+.+.+...+.+++-.|++++.... ..-.+-+++.+++++|.+ .|.+++++||-..........
T Consensus 413 ~~~~~~~~a~~G~~~l~va~~~~~lG~i~-----------l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~ 480 (679)
T PRK01122 413 LDAAVDEVARKGGTPLVVAEDNRVLGVIY-----------LKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAA 480 (679)
T ss_pred HHHHHHHHHhCCCcEEEEEECCeEEEEEE-----------EeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHH
Confidence 34445667777778888888998775321 122367899999999987 599999999999999988887
Q ss_pred ccCc
Q 002314 659 EYNL 662 (937)
Q Consensus 659 ~~~l 662 (937)
++++
T Consensus 481 elGI 484 (679)
T PRK01122 481 EAGV 484 (679)
T ss_pred HcCC
Confidence 7665
No 370
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=23.38 E-value=7.1e+02 Score=28.74 Aligned_cols=147 Identities=14% Similarity=0.182 Sum_probs=91.0
Q ss_pred cccccCCHHHHHHHHHHhHHhCcCccCcEEEEEEEcCCC-CChhHHHHHHHHHHHHHHHhhc-ccCCCCcccEEEeCCCC
Q 002314 371 RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR-TDVPEYQRLTSQVHEIVGRING-RFGTLTAVPIHHLDRSL 448 (937)
Q Consensus 371 Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lvqi~~p~r-~~~~~y~~l~~~l~~lv~~IN~-~~g~~~~~pV~~~~~~v 448 (937)
-++-.|.-..=+.+.+.+-+..|+... .+.++..-. .+.+++..+ +++++. +-|. .. |.+..
T Consensus 198 Ni~vvK~~~~PmLi~E~aYR~~P~~v~---~~~V~Nt~~~ke~~~F~~f-------~~~ldlvr~gk-----as-fegR~ 261 (364)
T PF10933_consen 198 NISVVKTCFIPMLICEEAYRADPDAVE---HVYVTNTYHLKEHPTFVNF-------ANSLDLVRDGK-----AS-FEGRF 261 (364)
T ss_pred CceEEeecCccHHHHHHHHHhChhhcc---eEEEecchhhhcCHHHHHH-------HHhhHHhhcCe-----eE-Eeeec
Confidence 333344444445667777778898754 444543211 122333333 333322 2232 22 46666
Q ss_pred CHHHHHHHHHHccEEEECCCCcCCChhHHHHHHhcCCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHHcCC
Q 002314 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMS 528 (937)
Q Consensus 449 ~~~el~aly~~ADv~vv~Sl~EG~nLv~~EamAc~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~ 528 (937)
+..+..+=| +|++|---.--|+|..-+|++-- +=|+|-- ++.|++-|+.-+-+|..+=|++|.+|+...
T Consensus 262 ~~p~fla~~--tD~VvSHqWeN~lNYlY~daLyg----gYPLVHN-----S~~l~d~GYYY~~fD~~~G~r~L~~A~~~H 330 (364)
T PF10933_consen 262 DFPDFLAQH--TDAVVSHQWENPLNYLYYDALYG----GYPLVHN-----SPLLKDVGYYYPDFDAFEGARQLLRAIREH 330 (364)
T ss_pred ChHHHHHhC--CCEEEeccccchhhHHHHHHHhc----CCCcccC-----cchhcccCcCCCCccHHHHHHHHHHHHHHc
Confidence 777766655 69988777778999999999884 2366643 455666789999999999999999999876
Q ss_pred HHHHHHHHHhhhhhhh
Q 002314 529 PEEREKRHWHNFTHVT 544 (937)
Q Consensus 529 ~~er~~r~~~~~~~V~ 544 (937)
+.....-.++.++++.
T Consensus 331 D~~~~~Y~~ra~~~l~ 346 (364)
T PF10933_consen 331 DADLDAYRARARRLLD 346 (364)
T ss_pred cccHHHHHHHHHHHHH
Confidence 6544444444444443
No 371
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=23.22 E-value=1.6e+02 Score=34.25 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=28.9
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
+-+.+.++|+.|.+ .|..++|+|+.+...++..+..
T Consensus 217 l~pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~ 252 (381)
T PLN02575 217 LRTGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGS 252 (381)
T ss_pred cCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHH
Confidence 34678999999986 5899999999988888766654
No 372
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=23.01 E-value=61 Score=31.66 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcC
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 811 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~ 811 (937)
.+..+.+.++++++ ++++.+++||| ...|..+-+.++
T Consensus 134 p~~~~~~~~~~~~~------~~p~~~~~vgD-~~~d~~~A~~~G 170 (176)
T PF13419_consen 134 PDPDAYRRALEKLG------IPPEEILFVGD-SPSDVEAAKEAG 170 (176)
T ss_dssp TSHHHHHHHHHHHT------SSGGGEEEEES-SHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHcC------CCcceEEEEeC-CHHHHHHHHHcC
Confidence 34678999999998 57899999999 888877766654
No 373
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=22.94 E-value=59 Score=31.96 Aligned_cols=36 Identities=17% Similarity=0.054 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 810 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~ 810 (937)
-|...++.+++.++ .+++++++||| +..|..+=+.+
T Consensus 102 P~~~~~~~~~~~~~------~~~~e~i~IGD-s~~Di~~A~~~ 137 (147)
T TIGR01656 102 PKPGLILEALKRLG------VDASRSLVVGD-RLRDLQAARNA 137 (147)
T ss_pred CCHHHHHHHHHHcC------CChHHEEEEcC-CHHHHHHHHHC
Confidence 35667889999988 56899999999 76665544444
No 374
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=22.84 E-value=76 Score=30.97 Aligned_cols=33 Identities=15% Similarity=-0.029 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHh
Q 002314 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 809 (937)
Q Consensus 769 KG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~ 809 (937)
+...+.+++++++ .++ .+++||| +..|..+=+.
T Consensus 120 ~~~~~~~~~~~~~------~~~-~~l~iGD-s~~Di~aa~~ 152 (154)
T TIGR01549 120 EPEIFLAALESLG------LPP-EVLHVGD-NLNDIEGARN 152 (154)
T ss_pred CHHHHHHHHHHcC------CCC-CEEEEeC-CHHHHHHHHH
Confidence 5688999999988 456 8999999 8888665443
No 375
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=22.83 E-value=60 Score=33.67 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=27.8
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHH
Q 002314 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 808 (937)
Q Consensus 763 ~p~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~ 808 (937)
.+-|.+|+..|..+.+ +.+.++++|| +++|.+.=.
T Consensus 142 s~fG~dK~~vI~~l~e----------~~e~~fy~GD-svsDlsaak 176 (220)
T COG4359 142 SQFGHDKSSVIHELSE----------PNESIFYCGD-SVSDLSAAK 176 (220)
T ss_pred cccCCCcchhHHHhhc----------CCceEEEecC-CcccccHhh
Confidence 4568999999988754 3567999999 999977543
No 376
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=22.48 E-value=1e+02 Score=31.70 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=29.6
Q ss_pred hHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 626 DLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 626 ~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
...++|+.|.+ .|..++|+||.+...++..+...++
T Consensus 110 ~~~~~L~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl 145 (197)
T TIGR01548 110 TPKGLLRELHR-APKGMAVVTGRPRKDAAKFLTTHGL 145 (197)
T ss_pred CHHHHHHHHHH-cCCcEEEECCCCHHHHHHHHHHcCc
Confidence 34788888876 5899999999999999988887653
No 377
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=22.24 E-value=1.1e+02 Score=32.20 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=32.9
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+-|.+.++|+.|.+ .|..++|+||.....++..++.++
T Consensus 92 ~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~ 130 (222)
T PRK10826 92 PLLPGVREALALCKA-QGLKIGLASASPLHMLEAVLTMFD 130 (222)
T ss_pred CCCCCHHHHHHHHHH-CCCeEEEEeCCcHHHHHHHHHhCc
Confidence 356789999999987 599999999999988888877654
No 378
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=22.03 E-value=92 Score=32.49 Aligned_cols=39 Identities=13% Similarity=0.308 Sum_probs=32.9
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+.+.+.+.|+.|.+ .|..++|+||.....+...+..++
T Consensus 87 ~l~~G~~~~L~~L~~-~g~~~~ivT~~~~~~~~~~l~~~~ 125 (220)
T TIGR03351 87 VALPGAEEAFRSLRS-SGIKVALTTGFDRDTAERLLEKLG 125 (220)
T ss_pred ccCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHhh
Confidence 356789999999987 489999999999999888877654
No 379
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=22.01 E-value=1e+02 Score=32.45 Aligned_cols=38 Identities=18% Similarity=0.255 Sum_probs=27.3
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 765 ~gvnKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|-.|-..++..+ + .+.+...+-|| +.+|.+|++.+..
T Consensus 159 ~g~~Kv~rl~~~~---~------~~~~~~~aYsD-S~~D~pmL~~a~~ 196 (210)
T TIGR01545 159 LGHEKVAQLEQKI---G------SPLKLYSGYSD-SKQDNPLLAFCEH 196 (210)
T ss_pred CChHHHHHHHHHh---C------CChhheEEecC-CcccHHHHHhCCC
Confidence 3445666665544 3 13455689999 9999999999976
No 380
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=21.92 E-value=2.1e+02 Score=30.79 Aligned_cols=60 Identities=10% Similarity=0.145 Sum_probs=0.0
Q ss_pred cchHHHHHHHHhcC-CeEEEEec--CcccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCeEEEEcC--CChh
Q 002314 577 LREADSIERYLRSN-NRLLILGF--NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG--SDRN 651 (937)
Q Consensus 577 L~~~~~~~~y~~s~-~rLI~lD~--DGTL~~~~~~P~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~IvSG--R~~~ 651 (937)
.+..++++.+.... ..+|++|+ |||+... ..+.++++++..+.. ++++| |+.+
T Consensus 148 ~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G~---------------------~~~li~~l~~~~~ip-vi~~GGi~s~e 205 (234)
T PRK13587 148 LNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGP---------------------NFELTGQLVKATTIP-VIASGGIRHQQ 205 (234)
T ss_pred CCHHHHHHHHHHcCCCEEEEecccCcCCCCcc---------------------CHHHHHHHHHhCCCC-EEEeCCCCCHH
Q ss_pred hHHHHhc
Q 002314 652 VLDKNFQ 658 (937)
Q Consensus 652 ~L~~~~~ 658 (937)
++.+++.
T Consensus 206 di~~l~~ 212 (234)
T PRK13587 206 DIQRLAS 212 (234)
T ss_pred HHHHHHH
No 381
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=21.86 E-value=1.2e+02 Score=32.80 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=39.2
Q ss_pred cCCeEEEEecCcccCCCCCCCCCCCcccc---------------ccccCCChhHHHHHHHhhcCCCCeEEEEcCCChhh
Q 002314 589 SNNRLLILGFNATLTEPVDTPGRRGDQIR---------------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (937)
Q Consensus 589 s~~rLI~lD~DGTL~~~~~~P~~~~~~~~---------------~~~~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 652 (937)
-+.+.|++|+|-|.++..+-. +.++. +-.+.+-|...+-|+=.-+ .|+.|+.+|-|....
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yq---gy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~-~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQ---GYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNS-NGGKIFYISNRDQEN 151 (274)
T ss_pred CCCceEEEecchHhhcCcccc---chhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHh-cCcEEEEEeccchhc
Confidence 456699999999999875433 12221 1223455667777776554 577888888887665
No 382
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=21.71 E-value=1.7e+02 Score=38.62 Aligned_cols=39 Identities=3% Similarity=0.049 Sum_probs=34.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
.+-+++.++|++|.+ .|..|+++|||....+......++
T Consensus 568 plr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 568 PPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred CChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC
Confidence 467899999999987 599999999999999988877654
No 383
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=21.56 E-value=1.1e+02 Score=32.32 Aligned_cols=38 Identities=21% Similarity=0.287 Sum_probs=33.1
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccC
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~ 661 (937)
+-+.+.++|..|.+ .|..++|+|+++...++..+..++
T Consensus 90 ~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~~g 127 (220)
T COG0546 90 LFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKALG 127 (220)
T ss_pred cCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHhC
Confidence 44678999999987 589999999999999999998764
No 384
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=21.53 E-value=1.3e+02 Score=31.62 Aligned_cols=52 Identities=15% Similarity=0.280 Sum_probs=39.9
Q ss_pred cCCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCceE--EeeCceEEE
Q 002314 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWL--AAENGMFLR 673 (937)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l~l--iaenG~~ir 673 (937)
.+++|.++++...|.+ .|.+|+++||-=+..+...-+.+++.+ +-.|=.++.
T Consensus 87 ~~lT~Gi~eLv~~L~~-~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd 140 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHA-RGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD 140 (227)
T ss_pred CccCCCHHHHHHHHHH-cCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec
Confidence 4678899999999997 599999999998888887777776655 434444443
No 385
>PRK12704 phosphodiesterase; Provisional
Probab=21.52 E-value=2.5e+02 Score=34.03 Aligned_cols=56 Identities=21% Similarity=0.335 Sum_probs=45.9
Q ss_pred CcCCChhHHHHHHhc-----CCCCceEEEeCCCCccccc-------C-CceEEECCCCHHHHHHHHHHHHc
Q 002314 469 RDGMNLVSYEFVACQ-----DLKKGVLILSEFAGAAQSL-------G-AGAILVNPWNITEVANAIARALN 526 (937)
Q Consensus 469 ~EG~nLv~~EamAc~-----~~~~g~lVlSe~aG~~~~l-------g-~~gllVnP~D~~~lA~aI~~aL~ 526 (937)
+||-|+-++|.. ++ .+.|.++++|.|.....++ + .+| ++.|++++++......-+.
T Consensus 228 reGrnir~~e~~-tgvd~iiddtp~~v~ls~~~~~rre~a~~~l~~l~~dg-~i~P~~iee~~~~~~~~~~ 296 (520)
T PRK12704 228 REGRNIRALETL-TGVDLIIDDTPEAVILSGFDPIRREIARLALEKLVQDG-RIHPARIEEMVEKARKEVD 296 (520)
T ss_pred CCcchHHHHHHH-hCCeEEEcCCCCeEEEecCChhhHHHHHHHHHHHHhcC-CcCCCCHHHHHHHHHHHHH
Confidence 799999999974 56 5778999999999888554 2 234 5899999999999988875
No 386
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=21.30 E-value=1.5e+02 Score=27.65 Aligned_cols=37 Identities=27% Similarity=0.345 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEecCCCCcHHHHHhcCc
Q 002314 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 812 (937)
Q Consensus 768 nKG~Av~~Ll~~l~~~~~~~~~~d~vl~iGD~d~nDEdMf~~~~~ 812 (937)
.|-..|++|++.++ ....++|||-+..|-+.+..+-.
T Consensus 50 ~K~~~i~~i~~~fP--------~~kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 50 HKRDNIERILRDFP--------ERKFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHHCC--------CCcEEEEeeCCCcCHHHHHHHHH
Confidence 79999999999875 44569999966679999887754
No 387
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=20.90 E-value=1.8e+02 Score=31.71 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=28.7
Q ss_pred CChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcc
Q 002314 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (937)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~ 659 (937)
+-+.+.+.|+.|.+ .|..++|+|+.+...++..+..
T Consensus 110 l~pg~~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~ 145 (260)
T PLN03243 110 LRPGSREFVQALKK-HEIPIAVASTRPRRYLERAIEA 145 (260)
T ss_pred cCCCHHHHHHHHHH-CCCEEEEEeCcCHHHHHHHHHH
Confidence 34678999999986 5899999999988777666544
No 388
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=20.62 E-value=1e+02 Score=33.18 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=31.8
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhccc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~ 660 (937)
.+-|.+.++|+.|.+ .|..++|+||.+...++..+..+
T Consensus 99 ~~~pg~~e~L~~L~~-~g~~l~IvT~~~~~~~~~~l~~~ 136 (253)
T TIGR01422 99 SPIPGVIEVIAYLRA-RGIKIGSTTGYTREMMDVVAPEA 136 (253)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHHH
Confidence 355788999999987 48999999999999888777654
No 389
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=20.19 E-value=1.3e+02 Score=31.37 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=33.1
Q ss_pred CCChhHHHHHHHhhcCCCCeEEEEcCCChhhHHHHhcccCc
Q 002314 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (937)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~~~~~~l 662 (937)
.+-|.+.++|+.|.+ .|..++|+||.....++.++..+++
T Consensus 93 ~~~~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l 132 (226)
T PRK13222 93 RLYPGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEALGI 132 (226)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 356789999999986 5899999999999988888876543
No 390
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=20.16 E-value=95 Score=33.20 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=15.4
Q ss_pred hcCCeEEEEecCcccCCCC
Q 002314 588 RSNNRLLILGFNATLTEPV 606 (937)
Q Consensus 588 ~s~~rLI~lD~DGTL~~~~ 606 (937)
++.+.|++||||-|+++..
T Consensus 10 ~~~ril~~FDFD~TIid~d 28 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQD 28 (256)
T ss_pred cCCcEEEEEecCceeecCC
Confidence 4577899999999999764
Done!