BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002318
         (936 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P59015|VPS18_DANRE Vacuolar protein sorting-associated protein 18 homolog OS=Danio
           rerio GN=vps18 PE=2 SV=2
          Length = 974

 Score =  492 bits (1266), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 310/889 (34%), Positives = 488/889 (54%), Gaps = 91/889 (10%)

Query: 24  ITCMSAGNDVIVLGTSKGWLIRHDFGAGDSYDIDLSAGRPGEQSIHKVFVDPGGSHCIAT 83
           I   S  N+ + +   K  L+R D G  D  +  +  GR  +  +H++F+DP GSH +  
Sbjct: 57  INQFSVCNNQLCMSLGKDTLLRIDLGKPDQPN-QIELGRKDDSKVHRLFLDPTGSHLVIC 115

Query: 84  IVGSGGAETFYTHAKWSKPRVLSKLKGLVVNAVAWNRQQITEASTKEIILGTDTGQLHEM 143
           +  +   E  Y +    K R LS+ +G ++ ++ WN+   +E +T  I++GT  G + E 
Sbjct: 116 LTTN---ECVYLNRNTQKVRGLSRWRGHLIESIGWNKLIGSETNTGPILVGTSQGIIFEA 172

Query: 144 AVDEKD------KREKYIKLLFELNE--LPEAFMGLQMETASLSNGTRYYVMAVTPTRLY 195
            +   +        ++Y + +  L E   P     L++E       T+Y+++A T  RL+
Sbjct: 173 EISASEGSLFNTNPDQYFRQVHYLEEDGKPAPVCCLEVERGL---ETKYFIIATTRKRLF 229

Query: 196 SFTGF---GS----LDTVFASYLDRAVHFMELPGEILNSELHFFIKQRRA--VHFAWLSG 246
            F G    GS      ++FA   D    F E P  +  SE+ F+  + R+    FAW+ G
Sbjct: 230 QFVGKLAEGSEQQGFSSIFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRSRPKTFAWMMG 289

Query: 247 AGIYHGGLNFGAQRSSPNGDENFVENKALLSYSKLSEGAEA-----VKPGSMAVSEYHFL 301
            G+ +G L++             V   +LLS  ++ E  +      VKP S+ ++++HFL
Sbjct: 290 NGVLYGQLDY-------------VRPDSLLSDVQVWEYTQDIDLNFVKPISIVLTQFHFL 336

Query: 302 LLMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAGVFYAYDQNSIFQVSVN 361
           LL+ ++V+ +  ++ Q++ E  F +   ++ + I     D   G+ + Y + ++F+  + 
Sbjct: 337 LLLPDRVRGICTLNGQVVHEDVFPEKFGTLQKMI----KDPITGLVWIYTEKAVFRYHIQ 392

Query: 362 DEGRDMWKVYLDMKEYAAALANCRD-PLQRDQVYLVQAEAAFATKDFHRAASFYAKI-NY 419
            E RD+W++Y++M ++  A   C+D P   D V   +AE  F  K +  +A  YA   NY
Sbjct: 393 KEARDVWQMYMNMNKFDLAKEYCKDRPECLDMVLAKEAEHCFQNKRYLESAKCYALTQNY 452

Query: 420 ILSFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRLLLE 479
              FEEI LKFI   +++AL+ FL++KL NL   +K QIT++ TW TELYL+++ +L   
Sbjct: 453 ---FEEIALKFIEAKQEEALKEFLIKKLVNLKPSEKTQITLLVTWLTELYLNRLGQL--- 506

Query: 480 DDTALENRSSEYQSIMREFRAFLSDCK--DVL--DEATTMKLLESYGRVEELVFFASLKE 535
              A E +   +     EFR FL   K  D    + +T   LL S+G V+ +V+F+ + +
Sbjct: 507 --EADEGKQHLFLETREEFRTFLKSPKHKDCFYNNRSTIYDLLASHGDVDNMVYFSVIMQ 564

Query: 536 QHEIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDLIMLDAYETVESWMTTNN-LNP 594
            +E V+ HY Q  +   AL +L K      L YKF+P L+     + V++W+   N L+P
Sbjct: 565 DYERVISHYCQHDDYSAALDVLSK-HCDDKLFYKFSPVLMQHIPKKVVDAWIQMGNRLDP 623

Query: 595 RKLIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDDSALLR 654
           + LIPA++ YS +  +  + +E I+Y+EFCV+ L  ++  +HN LLSLYAK + D ALL 
Sbjct: 624 KNLIPALVNYS-QMGSMQQINETIRYMEFCVYELDVKEEAIHNYLLSLYAKHKPD-ALLW 681

Query: 655 FLQCKFGKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHEEAVALALQVDPEL 714
           +L+    +   +  +  YD KYALRLC +   ++ACV +Y +M ++EEAV LAL+VD +L
Sbjct: 682 YLE----QAGTHVSDIHYDLKYALRLCSEHGYLQACVLVYKIMELYEEAVDLALKVDVDL 737

Query: 715 AMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPF 774
           A + AD  EDDE+LRKKLWL +A+HV+++EK     +++KA+  L   + LLKIEDILPF
Sbjct: 738 AKSCADLPEDDEELRKKLWLKIARHVVQEEK-----DVKKAMNCLSSCN-LLKIEDILPF 791

Query: 775 FPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRDE 834
           FPDF  ID FKEAICSSL++YNK IE+LKQEM +AT  A  IR DI  +  +Y V++  E
Sbjct: 792 FPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKRIREDIQEMRNKYGVVESQE 851

Query: 835 DCGVCRRKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQCLIAHV 883
            C  C   +L                   PFY+F CGH FH  CL+  V
Sbjct: 852 KCATCDFPLL-----------------NRPFYLFLCGHMFHYDCLLQEV 883


>sp|Q9P253|VPS18_HUMAN Vacuolar protein sorting-associated protein 18 homolog OS=Homo
           sapiens GN=VPS18 PE=1 SV=2
          Length = 973

 Score =  444 bits (1141), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 306/887 (34%), Positives = 467/887 (52%), Gaps = 87/887 (9%)

Query: 24  ITCMSAGNDVIVLGTSKGWLIRHDFG-AGDSYDIDLSAGRPGEQSIHKVFVDPGGSHCIA 82
           IT +   ++ + +   K  L+R D G A +   ++L  GR  +  +HK+F+D  GSH   
Sbjct: 57  ITSLVVSSNQLCMSLGKDTLLRIDLGKANEPNHVEL--GRKDDAKVHKMFLDHTGSH--- 111

Query: 83  TIVGSGGAETFYTHAKWSKPRVLSKLKGLVVNAVAWNRQQITEASTKEIILGTDTGQLHE 142
            ++     E  Y +    K R L++ KG +V +V WN+   TE+ST  I++GT  G + E
Sbjct: 112 LLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFE 171

Query: 143 MAVDEKD------KREKYIKLLFELNELPEAFMGLQMETASLSNGTRYYVMAVTPTRLYS 196
             +   +        + Y + L+ LNE         +E     +G R +V+A T  RL+ 
Sbjct: 172 AELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG-RSFVIATTRQRLFQ 230

Query: 197 FTGFGS-------LDTVFASYLDRAVHFMELPGEILNSELHFFIKQRRAVH--FAWLSGA 247
           F G  +          +FA+Y D    F E P  +  SEL F+  + R+    FAW+ G 
Sbjct: 231 FIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGD 290

Query: 248 GIYHGGLNFGAQRSSPNGDENFVENKALLSYSKLSEGAEAVKPGS-----MAVSEYHFLL 302
           G+ +G L+ G   S             LLS  ++ E  E V PG+     + ++++HFLL
Sbjct: 291 GVLYGALDCGRPDS-------------LLSEERVWEYPEGVGPGASPPLAIVLTQFHFLL 337

Query: 303 LMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAGVFYAYDQNSIFQVSVND 362
           L+ ++V+ V  ++ Q++    F +    +      +  D++ G  +AY + ++F+  V  
Sbjct: 338 LLADRVEAVCTLTGQVVLRDHFLEKFGPLKH----MVKDSSTGQLWAYTERAVFRYHVQR 393

Query: 363 EGRDMWKVYLDMKEYAAALANCRD-PLQRDQVYLVQAEAAFATKDFHRAASFYAKINYIL 421
           E RD+W+ YLDM  +  A   CR+ P   D V   +A+  F  + +  +A  YA      
Sbjct: 394 EARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSY- 452

Query: 422 SFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRLLLEDD 481
            FEEI LKF+   +++AL  FL RKL +L   ++ Q T+++TW TELYL ++   L  D 
Sbjct: 453 -FEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLG-ALQGDP 510

Query: 482 TALENRSSEYQSIMREFRAFLSDCKD----VLDEATTMKLLESYGRVEELVFFASLKEQH 537
            AL    + Y+     FR FLS  +         A+  +LL S+G  E +V+FA + + +
Sbjct: 511 EAL----TLYRETKECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDY 566

Query: 538 EIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDLIMLDAYETVESWMTTNN-LNPRK 596
           E VV ++ Q    ++AL +L +   P  L YKF+P LI     + V++W+   + L+ R+
Sbjct: 567 ERVVAYHCQHEAYEEALAVLARHRDP-QLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQ 625

Query: 597 LIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFL 656
           LIPA++ YS     + +  + I+Y+EFCV+ L   +  +HN LLSLYA+   DS L    
Sbjct: 626 LIPALVNYSQGGEVQ-QVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLE 684

Query: 657 QCKFGKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHEEAVALALQVDPELAM 716
           Q      R +     YD KYALRLC +    RACVH+Y ++ ++EEAV LALQVD +LA 
Sbjct: 685 QAGASPHRVH-----YDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAK 739

Query: 717 AEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFP 776
             AD  E+DE+LRKKLWL +A+HV+++E     E+++ A+A L     LLKIED+LPFFP
Sbjct: 740 QCADLPEEDEELRKKLWLKIARHVVQEE-----EDVQTAMACLASCP-LLKIEDVLPFFP 793

Query: 777 DFALIDDFKEAICSSLDDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRDEDC 836
           DF  ID FKEAICSSL  YN  I++L++EM +AT  A  IR D+  L  RY  ++  + C
Sbjct: 794 DFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKC 853

Query: 837 GVCRRKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQCLIAHV 883
             C   +L                   PFY+F CGH FHA CL+  V
Sbjct: 854 ATCDFPLL-----------------NRPFYLFLCGHMFHADCLLQAV 883


>sp|Q8R307|VPS18_MOUSE Vacuolar protein sorting-associated protein 18 homolog OS=Mus
           musculus GN=Vps18 PE=1 SV=2
          Length = 973

 Score =  442 bits (1136), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 309/887 (34%), Positives = 462/887 (52%), Gaps = 100/887 (11%)

Query: 26  CMSAGNDVIVLGTSKGWLIRHDFG-AGDSYDIDLSAGRPGEQSIHKVFVDPGGSHCIATI 84
           CMS G D          L+R D G A +   ++L  GR  +  +HK+F+D  GSH    +
Sbjct: 68  CMSLGKDT---------LLRIDLGKASEPNRVEL--GRKDDAKVHKMFLDHTGSH---LL 113

Query: 85  VGSGGAETFYTHAKWSKPRVLSKLKGLVVNAVAWNRQQITEASTKEIILGTDTGQLHEMA 144
           V     E  Y +    K R L++ KG +V +V WN+    E+ST  I++GT  GQ+ E  
Sbjct: 114 VALSSTEVLYMNRNGQKARPLARWKGQLVESVGWNKAMGNESSTGPILVGTAQGQIFEAE 173

Query: 145 VDEKD------KREKYIKLLFELNEL--PEAFMGLQMETASLSNGTRYYVMAVTPTRLYS 196
           +   +        + Y + L+ LNE   P     L+ E      G   +V+A T  RL+ 
Sbjct: 174 LSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRG---FVIATTRQRLFQ 230

Query: 197 FTGFGSLDT-------VFASYLDRAVHFMELPGEILNSELHFFIKQRRAVH--FAWLSGA 247
           F G    DT       +FA+Y D    F E P  +  SEL F+  + R+    FAW+ G 
Sbjct: 231 FIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGD 290

Query: 248 GIYHGGLNFGAQRSSPNGDENFVENKALLSYSKLSEGAEAVKPGS-----MAVSEYHFLL 302
           G+ +G L+ G   S             LLS  ++ E    V PG+     + ++++HFLL
Sbjct: 291 GVLYGSLDCGRPDS-------------LLSEERVWEYPAGVGPGANPPLAIVLTQFHFLL 337

Query: 303 LMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAGVFYAYDQNSIFQVSVND 362
           L+ ++V+ V  ++ Q++    F +    +      +  D++ G  +AY + ++F+  V  
Sbjct: 338 LLADRVEAVCTLTGQVVLRDHFLEKFGPLRH----MVKDSSTGHLWAYTERAVFRYHVQR 393

Query: 363 EGRDMWKVYLDMKEYAAALANCRD-PLQRDQVYLVQAEAAFATKDFHRAASFYAKINYIL 421
           E RD+W+ YLDM  +  A   CR+ P   D V   +A+  F    +  +A  YA      
Sbjct: 394 EARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSY- 452

Query: 422 SFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMISTWATELYLDKINRLLLEDD 481
            FEEI LKF+   +++AL  FL RKL  L   ++ Q T+++TW TELYL ++  L  + D
Sbjct: 453 -FEEIALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPD 511

Query: 482 TALENRSSEYQSIMREFRAFLSDCKD----VLDEATTMKLLESYGRVEELVFFASLKEQH 537
                  + Y+     FR FLS  +         A+  +LL S+G  E +V+FA + + +
Sbjct: 512 AL-----TLYRDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDY 566

Query: 538 EIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDLIMLDAYETVESWMTTNN-LNPRK 596
           E VV ++ Q    ++AL +L +   P  L YKF+P LI     + V++W+   + L+ R+
Sbjct: 567 ERVVAYHCQHEAYEEALAVLARHRDP-QLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQ 625

Query: 597 LIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFL 656
           LIPA++ YS    A+ +  + I+Y+EFCV+ L   +  +HN LLSLYA+ +  S L    
Sbjct: 626 LIPALVNYSQGGEAQ-QVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLE 684

Query: 657 QCKFGKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHEEAVALALQVDPELAM 716
           Q      R +     YD KYALRLC +    RACVH+Y ++ ++EEAV LALQVD +LA 
Sbjct: 685 QAGASPHRVH-----YDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAK 739

Query: 717 AEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFP 776
             AD  E+DE+LRKKLWL +A+HV+++E     E+++ A+A L     LLKIED+LPFFP
Sbjct: 740 QCADLPEEDEELRKKLWLKIARHVVQEE-----EDVQTAMACLASCP-LLKIEDVLPFFP 793

Query: 777 DFALIDDFKEAICSSLDDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRDEDC 836
           DF  ID FKEAICSSL  YN  I++L++EM +AT  A  IR D+  L  RY  ++  + C
Sbjct: 794 DFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKC 853

Query: 837 GVCRRKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQCLIAHV 883
             C   +L                   PFY+F CGH FHA CL+  V
Sbjct: 854 STCDFPLL-----------------NRPFYLFLCGHMFHADCLLQAV 883


>sp|Q24314|VPS18_DROME Vacuolar protein sorting-associated protein 18 homolog
           OS=Drosophila melanogaster GN=dor PE=1 SV=3
          Length = 1002

 Score =  312 bits (800), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 250/861 (29%), Positives = 416/861 (48%), Gaps = 85/861 (9%)

Query: 68  IHKVFVDPGGSHCIATIVGSGGA-----ETFYTH------AKWSKPRVLSKLKGLVVNAV 116
           I ++F+DP G H I  +V          +  Y H      A+  K R + K K   + AV
Sbjct: 111 ITRMFLDPTGHHIIIALVPKSATAGVSPDFLYIHCLESPQAQQLKVRRIEKFKDHEITAV 170

Query: 117 AWNRQQITEASTKEIILGTDTGQLHEMAVDEKDKREKYIKLLFELNELPEAFMGLQMETA 176
           A+N     E+ST  I+LGT  G + E  ++         K L++L      +    ++  
Sbjct: 171 AFNPYHGNESSTGPILLGTSRGLIFETELNPAADGHVQRKQLYDLGLGRPKYPITGLKLL 230

Query: 177 SLSNGTRYYVMAVTPTRLYSFTGF-----GSLDTVFASYLD--RAVHFMELPGEILNSEL 229
            + N +RY ++  +P  +Y+F         SL  +FA Y+   +  H  E   ++  S+L
Sbjct: 231 RVPNSSRYIIVVTSPECIYTFQETLKAEERSLQAIFAGYVSGVQEPHCEERKTDLTFSQL 290

Query: 230 HFFI--KQRRAVHFAWLSGAGIYHGGLNFGAQRSSPNGDENFVENKAL-LSYSK---LSE 283
            FF     +    +AWL G GI  G L+  A     N     + N  + L + K   LS 
Sbjct: 291 RFFAPPNSKYPKQWAWLCGEGIRVGELSIEA-----NSAATLIGNTLINLDFEKTMHLSY 345

Query: 284 GAEAVK-PGSMAVSEYHFLLLMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDA 342
           G   +  P +  ++EYH +LL  + V+ +  ++++ + +  FD+         + +  D 
Sbjct: 346 GERRLNTPKAFVLTEYHAVLLYADHVRAICLLNQEQVYQEAFDEARVGKP---LSIERDE 402

Query: 343 TAGVFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALANCRDPLQRDQVYLVQ-AEAA 401
             G  Y Y   ++F + V  E R++W++YLD  +Y  A A+  +  +  Q+ L Q A+AA
Sbjct: 403 LTGSIYVYTVKTVFNLRVTREERNVWRIYLDKGQYELATAHAAEDPEHLQLVLCQRADAA 462

Query: 402 FATKDFHRAASFYAKINYILSFEEITLKFISVSEQDALRTFLLRKL----------DNLA 451
           FA   +  AA +YA+ +   SFEE+ LKF+ + ++  +  ++ ++L          D L 
Sbjct: 463 FADGSYQVAADYYAETDK--SFEEVCLKFMVLPDKRPIINYVKKRLSRVTTKPMETDELD 520

Query: 452 KDDKCQITMISTWATELYLDKINRLLLEDDTALENRSSEYQSIMREFRAFLSDCKDVLDE 511
           +D    I  +  W  +LYL +IN +  +D+    +  +EY   M E  A +  C    + 
Sbjct: 521 EDKMNIIKALVIWLIDLYLIQIN-MPDKDEEWRSSWQTEYDEFMME--AHVLSCTRQ-NR 576

Query: 512 ATTMKLLESYGRVEELVFFASLKEQHEIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFA 571
            T  +L+  +     +  FA     ++ VV   ++     +ALQ L     P +L YK+A
Sbjct: 577 ETVRQLIAEHADPRNMAQFAIAIGDYDEVVAQQLKAECYAEALQTLINQRNP-ELFYKYA 635

Query: 572 PDLIMLDAYETVESWMTT-NNLNPRKLIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHN 630
           P+LI      TV++ M   + L   KL+P ++   +    + +  +  +YLEF +++L+ 
Sbjct: 636 PELITRLPKPTVDALMAQGSRLEVEKLVPTLIIMEN----REQREQTQRYLEFAIYKLNT 691

Query: 631 EDPGVHNLLLSLYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKEKRMRAC 690
            +  +HN LL LYA+ E    L+++L+ +   GR+      YD  YA ++C       A 
Sbjct: 692 TNDAIHNFLLHLYAEHEP-KLLMKYLEIQ---GRDES-LVHYDIYYAHKVCTDLDVKEAR 746

Query: 691 VHIYGMMSMHEEAVALALQVDPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRE 750
           V +  M+     AV LAL  D +LA   A +  D + +R+KLWL +A H I   KGT   
Sbjct: 747 VFLECMLRKWISAVDLALTFDMKLAKETASRPSDSK-IRRKLWLRIAYHDI---KGTN-- 800

Query: 751 NIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDAT 810
           +++KA+  LKE D LL+IED+LPFF DF  ID+FKEAIC +L DYN++I++L++EM + T
Sbjct: 801 DVKKALNLLKECD-LLRIEDLLPFFADFEKIDNFKEAICDALRDYNQRIQELQREMAETT 859

Query: 811 HGADNIRNDISALAQRYAVIDRDEDCGVCRRKILVAGRDYRMARGYASVGPMAPFYVFPC 870
              D +  ++  L Q    ++  + C +C   +LV                  PF++F C
Sbjct: 860 EQTDRVTAELQQLRQHSLTVESQDTCEICEMMLLV-----------------KPFFIFIC 902

Query: 871 GHAFHAQCLIAHVTQCTNETQ 891
           GH FH+ CL  HV     + Q
Sbjct: 903 GHKFHSDCLEKHVVPLLTKEQ 923


>sp|O74925|PEP3_SCHPO Vacuolar membrane protein pep3 OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=pep3 PE=3 SV=1
          Length = 900

 Score =  276 bits (707), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 232/912 (25%), Positives = 420/912 (46%), Gaps = 95/912 (10%)

Query: 5   RQVFQVDVLERYAAKGRGVITCMSAGNDVIVLGTSKGWLIRHDFG-AGDSYDIDLSAGRP 63
           R VF    LE+   +    I C++  N+++V+  +   L+  D     D  DI+L     
Sbjct: 36  RGVFS---LEKVQLQFPVSIRCLAVENNILVMALTSDKLMIVDLERPEDIIDIELPKKVL 92

Query: 64  GEQSIHKVFVDPGGSHCIATIVGSGGAETFYTHAKWSKPRVLSKLKGLVVNAVAWNRQQI 123
                +K+F+DP G +   T   + G    +T +   + RVL+KLKG  V AV WN   +
Sbjct: 93  ALGLTYKIFLDPSGHYIFVT--TTAGDNCLFTPSH--QGRVLTKLKGHTVEAVQWN---L 145

Query: 124 TEASTKEIILGTDTGQLHEM--AVDEKDKR--EKYIKLLFELNELPEAFMGL--QMETAS 177
              +  E+++ + +G L E+   +D  + +  EK I  L+      E+ MG+   ++  S
Sbjct: 146 NGGNILELLIASKSGVLLELVLTLDSANLKRIEKSINTLYSF-PFMESPMGILKNIQDDS 204

Query: 178 LSNGTRYYVMAVTPT------RLYSFTGF-GSLDTVFASYLDRAVH---FMELPGEILNS 227
           ++  T   ++   P       +LY    F GS+  + +   +       +   P  +   
Sbjct: 205 MTIVTNKRILRFEPKTSRGKDQLYFSPAFQGSMKEILSFSEEETAQCFSYSPFPKNLAEP 264

Query: 228 ELHFFIKQRRAVHFAWLSGAG--IYHGGLNFGAQRSSPNGDENFVENKALLSYSKLSEGA 285
                   +R ++   ++     I     N   + S P  + N                 
Sbjct: 265 YTLALKTSKRIIYLDIMNPVNPDIQDYEFNESPKLSVPTVEMN----------------- 307

Query: 286 EAVKPGSMAVSEYHFLLLMGNKVKVVNRISEQIIEELQFDQTSDSISRGIIGLCSDATAG 345
                  M ++ +H   L  + + +VNR++ +  E  Q  + + S    I+GLC D    
Sbjct: 308 -------MILTSFHLAFLDLDTLYIVNRVNGK--ESYQ-QRVNLSPHEEILGLCCDHEKN 357

Query: 346 VFYAYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALANCRDPLQRDQVYLVQAEAAFATK 405
            ++ Y  +S+ ++ VN+E R+   V+L+  ++  AL        R+ V +  AE     +
Sbjct: 358 TYWLYTTDSLHELVVNNETREASLVFLEKGDFEKALECANTAKVRNTVLVGYAEFLMEHE 417

Query: 406 DFHRAASFYAKINYILSFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMISTWA 465
           ++ RAA+ YA+   + S EE+ LKFI ++++D LR +L +KL +     K Q +++  W 
Sbjct: 418 EYERAATLYAET--LKSVEEVALKFIELNQKDVLRLYLWKKLRSYKSTMKIQKSLLVNWL 475

Query: 466 TELYLDKINRLLLEDDTAL--ENRSSEYQSIMREFRAFLSDCKDVLDEATTMKLLESYGR 523
            EL L K+N L  ++   L  EN   + Q + REF   L+  KD ++      L  +YG+
Sbjct: 476 LELMLAKLNSLDEKERLELFPENVMQQRQQVQREFSTLLNQYKDEINREAAYNLANNYGK 535

Query: 524 VEELVFFASLKEQHEIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDLIMLDAYETV 583
            E+L+  A++ +    ++H+++Q+   +KAL+ L +  V  +   + A  L+     ETV
Sbjct: 536 EEQLLQIATVMKDQSYIMHYWVQRENYEKALETLNE-GVSQETLIQHATALLTHRPNETV 594

Query: 584 ESWMTTNNLNPRKLIPAMMRYSSEPHAKNETHEVIKYLEFCVHRLHNEDPGVHNLLLSLY 643
             W    +L+   LIP+++ Y+   H   E +  I+YL +    L   DP +HN L  +Y
Sbjct: 595 SIWERQTDLDVHALIPSLLSYNQRSHVPVEENAAIRYLRYVTGVLGCVDPSIHNTLFCIY 654

Query: 644 A--KQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHE 701
           A     ++S L+ +++       + G    YD    +RLCL+    R+ V I  +M ++ 
Sbjct: 655 ACHSSSNESYLMNYIE-------QQGNHPLYDMDLGIRLCLQFNCRRSAVKILVLMKLYS 707

Query: 702 EAVALALQVDP-ELAMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLK 760
           + V LAL+ D  ELA   A+  E+D  L+K LW  +AK++  ++ G     I++ + FL 
Sbjct: 708 QGVELALEADDCELAATIANIPEEDVVLKKTLWQTIAKYMFSKKSG-----IKETLRFL- 761

Query: 761 ETDGLLKIEDILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDATHGADNIRNDI 820
           E   +L++ +++   P+   +DD  + +C  LD   K+IEQL  E+  A+  A  I+ + 
Sbjct: 762 ENSEVLQLPELIRLLPEDIKLDDLSDNVCDELDHCMKRIEQLDFEIGQASEVAHEIQTNA 821

Query: 821 SALAQRYAVIDRDEDCGVCRRKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQCLI 880
             +  RY V++ +E C  C + +                    PF +FPC HAFH  C++
Sbjct: 822 ENMRNRYIVLEPNESCWHCNQPLFS-----------------EPFVLFPCQHAFHRSCML 864

Query: 881 AHVTQCTNETQV 892
               +  +E  +
Sbjct: 865 EKTYKLASEKNI 876


>sp|P27801|PEP3_YEAST Vacuolar membrane protein PEP3 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=PEP3 PE=1 SV=1
          Length = 918

 Score =  215 bits (547), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 165/679 (24%), Positives = 322/679 (47%), Gaps = 71/679 (10%)

Query: 241 FAWLSGAGIYHGGLNFGAQRSSPNGDENF----VENKALLSYS---KLSEGAEAVKPGSM 293
           FAW++  GI  G L        P    NF      +K LL++      ++    +K   +
Sbjct: 207 FAWVTSNGIVFGDLKEKQMEKDP-ASNNFGKFLSSSKVLLNFELPDYQNDKDHLIK--DI 263

Query: 294 AVSEYHFLLLMGNKVKVVNRISEQI-----IEELQFDQTSDSISRGIIGLCSDATAGVFY 348
            ++ +H LLL  N V +V++++  +     I   Q   ++   +   +GL  D+    F+
Sbjct: 264 VLTAFHILLLRKNTVTMVSQLNNDVVFHETIPRHQLTGSNTDSNEKFLGLVRDSVKETFW 323

Query: 349 AYDQNSIFQVSVNDEGRDMWKVYLDMKEYAAALA----NCRDPLQRDQVYLVQAEAAFAT 404
            +   ++F++ + +E   +W + +   ++  AL+      R   + + V L +A   F T
Sbjct: 324 CFSNINVFEIIIENEPNSVWNLLVRDNKFDKALSLKGLTVR---EIESVKLSKAMYLFHT 380

Query: 405 -KDFHRAASFYAKINYILSFEEITLKFISVSEQDALRTFLLRKLDNLAKDDKCQITMIST 463
            KDFH AA     +  +  F EI L F+ + + + L   L+++LDN+    K    ++S+
Sbjct: 381 AKDFHSAAQTLGSMKDLSHFGEIALNFLQIKDYNDLNVILIKQLDNVPW--KSTQVVLSS 438

Query: 464 WATELYLDKINRLLLEDDTALENRSSE---------YQSIMREFRAFLSDCKDVLDEATT 514
           W    ++ ++N + L+ +T     + E          +    E   FL    + LD  T 
Sbjct: 439 WIIWNFMKQLNDIELKINTTKPASTDEDNLLNWNLNLKEKSNELTKFLESHLEKLDNETV 498

Query: 515 MKLLESYGRVEELVFFASLKEQHEIVVHHYIQQGEAKKALQMLRKPAVPIDLQYKFAPDL 574
            +++    R  EL+ FASL    + ++  +I QG   ++L++L       DL YK++  L
Sbjct: 499 YQIMSKQNRQNELLIFASLINDMKFLLSFWIDQGNWYESLKILLTINNH-DLVYKYSLIL 557

Query: 575 IMLDAYETVESWMTTNNLNPRKLIPAMMRYSSEPHAKNET---------HEVIKYLEFCV 625
           ++     TV +WM   +L+P KLIP ++++ +     ++          +  + YL++CV
Sbjct: 558 LLNSPEATVSTWMKIKDLDPNKLIPTILKFFTNWQNNSKLITNISEYPENYSLTYLKWCV 617

Query: 626 HRLHNE-DPGVHNLLLSLYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKE 684
             +    +P V+N +L +      +  +L     KF K  EN     YD  + LRL LK 
Sbjct: 618 REVPKMCNPIVYNSILYMMITDPRNDMILENDIIKFMKSNENK----YDLNFQLRLSLKF 673

Query: 685 KRMRACVHIYGMMSMHEEAVALALQ---VDPELAMAEADKVEDDEDLRKKLWLMVAKHVI 741
           K+ +  + +   +++ E+A+ LAL+   +D    +   + + +D  LRK+LWL +AKH++
Sbjct: 674 KKTKTSIFLLTRLNLFEDAIDLALKNNLIDDCKVIVNDEILIEDYKLRKRLWLKIAKHLL 733

Query: 742 EQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLDDYNKQIEQ 801
              K    + + + I  L +++ +L I+D+LPFF ++  I + KE +   L+++N ++ +
Sbjct: 734 LSMKDIDIKQLIRTI--LNDSNEILTIKDLLPFFNEYTTIANLKEELIKFLENHNMKMNE 791

Query: 802 LKQEMNDATHGADNIRNDISALAQRYAVIDRDEDCGVCRRKILVAGRDYRMARGYASVGP 861
           + +++ ++ +    I  +IS   + Y +++  + C  C       G+  ++ +       
Sbjct: 792 ISEDIINSKNLKVEINTEISKFNEIYRILEPGKSCDEC-------GKFLQIKK------- 837

Query: 862 MAPFYVFPCGHAFHAQCLI 880
              F VFPCGH FH  C+I
Sbjct: 838 ---FIVFPCGHCFHWNCII 853


>sp|Q7MH68|CAPP_VIBVY Phosphoenolpyruvate carboxylase OS=Vibrio vulnificus (strain YJ016)
           GN=ppc PE=3 SV=2
          Length = 877

 Score = 38.9 bits (89), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 11/65 (16%)

Query: 457 QITMISTW-ATELYLDKINRLLLE------DDT----ALENRSSEYQSIMREFRAFLSDC 505
           ++ ++S W A +LYL  IN L+ E      +DT    A E+    Y++I+++ R  LSD 
Sbjct: 266 EVLLLSRWKAADLYLKDINELISELSMTKCNDTVRQLAGEDEHEPYRAILKQLRTLLSDT 325

Query: 506 KDVLD 510
           K++LD
Sbjct: 326 KEILD 330


>sp|Q8DCN2|CAPP_VIBVU Phosphoenolpyruvate carboxylase OS=Vibrio vulnificus (strain CMCP6)
           GN=ppc PE=3 SV=1
          Length = 877

 Score = 38.9 bits (89), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 11/65 (16%)

Query: 457 QITMISTW-ATELYLDKINRLLLE------DDT----ALENRSSEYQSIMREFRAFLSDC 505
           ++ ++S W A +LYL  IN L+ E      +DT    A E+    Y++I+++ R  LSD 
Sbjct: 266 EVLLLSRWKAADLYLKDINELISELSMTKCNDTVRQLAGEDEHEPYRAILKQLRTLLSDT 325

Query: 506 KDVLD 510
           K++LD
Sbjct: 326 KEILD 330


>sp|Q618H8|VPS41_CAEBR Vacuolar protein sorting-associated protein 41 homolog
           OS=Caenorhabditis briggsae GN=vps-41 PE=3 SV=1
          Length = 898

 Score = 37.7 bits (86), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 9/109 (8%)

Query: 771 ILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDAT-HGADNIRNDISALAQRYAV 829
           I+   PD   I +  EA+   L D+   +E L+Q   D+T +    + N++   + +   
Sbjct: 770 IMDKLPDDVDIPNLSEALEKLLTDFTNYVE-LQQCCYDSTLNDLHVLTNNLMLASDKSVS 828

Query: 830 IDRDEDCGVCRRKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQC 878
           +     C +C + I+  G+D  + R +  +       VF CGH FH  C
Sbjct: 829 VSLMTRCSLCSQVIMNTGQDM-IPRKFNDIK------VFKCGHIFHLTC 870


>sp|P39702|VPS8_YEAST Vacuolar protein sorting-associated protein 8 OS=Saccharomyces
            cerevisiae (strain ATCC 204508 / S288c) GN=VPS8 PE=1 SV=2
          Length = 1274

 Score = 37.7 bits (86), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 9/55 (16%)

Query: 834  EDCGVCRRKILVAGRDYRMARGY---------ASVGPMAPFYVFPCGHAFHAQCL 879
            +DC +C +KI  AG D  +   +          SV    P  +F C H FH  CL
Sbjct: 1196 DDCEICGKKIWGAGLDPLLFLAWENVQRHQDMISVDLKTPLVIFKCHHGFHQTCL 1250


>sp|Q54YP4|VPS11_DICDI Vacuolar protein sorting-associated protein 11 homolog
           OS=Dictyostelium discoideum GN=vps11 PE=3 SV=1
          Length = 952

 Score = 37.4 bits (85), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 55/288 (19%), Positives = 111/288 (38%), Gaps = 56/288 (19%)

Query: 617 VIKYLEFCVHRLHNEDPGVHNLLLSLYAK----QEDDSALLRFLQCKFGKGRENGPEFFY 672
           ++K+LE+ V + +NE   ++N LL LY +    Q DD  + R         +    EF  
Sbjct: 652 LVKFLEYMVQQGNNESSLIYNTLLELYLRDDVNQTDDERIKR---------KAKAYEFLT 702

Query: 673 DPK------YALRLCLKEKRMRACVHIYGMMSMHEEAVALALQVDPELAMAEADKVEDDE 726
           +PK      +AL L          +++Y  + +  E +   ++ +    + +A K    +
Sbjct: 703 NPKSKFDQDHALILVQVHNWKEGVLYLYEKLELFNEIIEYHMENNDYDGLIKACKRYGVK 762

Query: 727 DLRKKLWLMVAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKE 786
           D    LW+         ++  + E     I  L   D     E+++P      ++   K 
Sbjct: 763 D--PNLWVRALSFFSTNKQDCQDE----IIEVLTNIDK----ENLIPPLLVIQILSQNKN 812

Query: 787 AICSSLDDY-----NKQIEQLKQEMNDATHGAD---NIRNDISALAQRYAVIDRDEDCGV 838
              + + DY     +++ +Q+ ++       AD    +R++I+ L     +  + + C  
Sbjct: 813 TTLAVIKDYISRRLSQETQQIDKDYTQIRQYADETEKMRHEINELRTNSKIFQQTK-CIA 871

Query: 839 CRRKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQCLIAHVTQC 886
           C   + +                  P   F C H+FH +CL  +  +C
Sbjct: 872 CLLALDL------------------PSVHFLCQHSFHQRCLGENEREC 901


>sp|Q8R3P2|DTX2_MOUSE Probable E3 ubiquitin-protein ligase DTX2 OS=Mus musculus GN=Dtx2
           PE=1 SV=2
          Length = 619

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 830 IDRDEDCGVCRRKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQCLIA 881
           +  +EDC +C  K+ VA     M    A +GPM    +  C HAFH  CL+A
Sbjct: 403 VAPEEDCIICMEKLAVASGYSDMTDSKA-LGPMVVGRLTKCSHAFHLLCLLA 453


>sp|Q86UW9|DTX2_HUMAN Probable E3 ubiquitin-protein ligase DTX2 OS=Homo sapiens GN=DTX2
           PE=1 SV=3
          Length = 622

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 830 IDRDEDCGVCRRKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQCLIA 881
           +  DEDC +C  K+  A   Y       ++G +A  ++  C HAFH  CL+A
Sbjct: 406 VPPDEDCIICMEKLSTA-SGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLA 456


>sp|P93043|VPS41_ARATH Vacuolar protein sorting-associated protein 41 homolog
           OS=Arabidopsis thaliana GN=VPS41 PE=3 SV=3
          Length = 980

 Score = 35.0 bits (79), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 85/399 (21%), Positives = 148/399 (37%), Gaps = 91/399 (22%)

Query: 538 EIVVHHYIQQGEAKKALQM---LRKPAVPIDLQYKFA---------PDLIMLDAYETVES 585
           E +   Y+  G+ +KA  +   L KP V  D   K++           L++LD       
Sbjct: 554 EALAELYVIDGQYQKAFSLYADLLKPEV-FDFIEKYSLHEAIRGKVVQLMLLDCKRATVL 612

Query: 586 WMTTNNL-NPRKLIPAMMRYSSEPHAKNETHEVIKYLEFCVHRL-------------HNE 631
           ++   +L  P +++P +++    P       +V+K  + C  R              H+ 
Sbjct: 613 FIQNRDLIPPSEVVPQLLKAGKNP-------QVLKAGKKCDSRYYLYLYLHALFEVSHDT 665

Query: 632 DPGVHNLLLSLYAKQEDDSALLRFLQCKFGKGRENGPEFFYDPKYALRLCLKEKRMRACV 691
               H++ + LYA + D   LL FL+              Y  + A  LC+K+  +R  V
Sbjct: 666 GKDFHDMQVELYA-EYDTKMLLPFLRS----------SQHYKLEKAYELCVKKDFLREQV 714

Query: 692 HIYGMMSMHEEAVALALQV--DPELAMAEADKVEDDEDLRKKLWLMVAKHVIEQEKGTKR 749
            + G M   ++A+A+ +    D E A+       DD+     LW  + K  + + +    
Sbjct: 715 FVLGRMGNAKQALAVIINKLGDIEEAVEFVSMQHDDD-----LWEELIKQCLNKPEMVG- 768

Query: 750 ENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLDDYNKQIEQLKQEMNDA 809
                    L+ T G L    I+   P+   I   ++ +   + DY  +   L+   ND 
Sbjct: 769 -------LLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIVTDYRTET-SLRHGCNDI 820

Query: 810 ----------------------THGADNIR-----NDISALAQRYAVIDRDEDCGVCRRK 842
                                 +H  D+ R     N+ S+ +QR  V+D+     +   K
Sbjct: 821 LKTDIVNLLVKCFNEARRGVCLSHEDDDSRAKREDNNRSSFSQRM-VVDKSLSIKMTEVK 879

Query: 843 ILVAGRDYRMARGYASVGPMA-PFYVFPCGHAFHAQCLI 880
               G D R    +  V        VF C HA+H  CL+
Sbjct: 880 SKTRG-DTRCCMCFDPVSIRGDTVVVFFCCHAYHETCLM 917


>sp|Q9P6N4|PEP5_SCHPO Vacuolar membrane protein pep5 OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=pep5 PE=3 SV=1
          Length = 906

 Score = 33.9 bits (76), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 19/106 (17%)

Query: 781 IDDFKEAICSSLDDYNKQIEQLKQEMNDATHGADNIRNDISALAQRYAVIDRDEDCGVCR 840
           ++   +++ S LD+Y + I +  + +       + I + +S L  R A + ++  C  C 
Sbjct: 817 LEHISDSMQSVLDNYRESISKQNEAIEMGKRDIEEITSQLSILRTR-AFVVQESKCSTC- 874

Query: 841 RKILVAGRDYRMARGYASVGPMAPFYVFPCGHAFHAQCLIAHVTQC 886
                 G D  +           P   F CGH++H +C+     +C
Sbjct: 875 ------GIDLEL-----------PMVHFRCGHSYHQRCVEDECIRC 903


>sp|Q54BC6|PSMD2_DICDI 26S proteasome non-ATPase regulatory subunit 2 OS=Dictyostelium
           discoideum GN=psmD2 PE=1 SV=1
          Length = 893

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 687 MRACVHIYGMMSMHEEAVALALQV-DPELAMAEADKVEDDEDLRKKLWLMVAKHVI 741
           ++ CV IY  M  + +A+ +A+++ DPEL       VE+++ + ++L  +VA+  I
Sbjct: 259 LKVCVEIYIKMKQYPDALRVAMKISDPELITEIFKLVENNKSILQQLGFLVARQKI 314


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 346,394,695
Number of Sequences: 539616
Number of extensions: 14796381
Number of successful extensions: 40013
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 39920
Number of HSP's gapped (non-prelim): 47
length of query: 936
length of database: 191,569,459
effective HSP length: 127
effective length of query: 809
effective length of database: 123,038,227
effective search space: 99537925643
effective search space used: 99537925643
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)