Query 002321
Match_columns 936
No_of_seqs 968 out of 6022
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 21:37:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002321.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002321hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.9E-77 6.5E-82 735.4 37.3 544 31-584 9-751 (768)
2 4eco_A Uncharacterized protein 100.0 2.2E-60 7.6E-65 570.5 22.6 482 33-550 29-601 (636)
3 3rgz_A Protein brassinosteroid 100.0 5.5E-59 1.9E-63 571.6 30.2 466 76-550 200-742 (768)
4 4ecn_A Leucine-rich repeat pro 100.0 5.2E-58 1.8E-62 557.5 29.2 473 32-549 267-864 (876)
5 1ziw_A TOLL-like receptor 3; i 100.0 2.6E-56 8.8E-61 543.1 39.1 510 63-577 3-627 (680)
6 3t6q_A CD180 antigen; protein- 100.0 8.4E-57 2.9E-61 539.9 33.9 506 66-577 14-565 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 1.3E-55 4.5E-60 547.2 36.9 494 64-577 14-565 (844)
8 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-55 4.2E-60 529.8 29.0 502 63-577 6-563 (606)
9 1ziw_A TOLL-like receptor 3; i 100.0 5.8E-53 2E-57 513.5 37.4 481 76-561 49-635 (680)
10 3j0a_A TOLL-like receptor 5; m 100.0 5.1E-53 1.8E-57 524.0 32.7 488 76-584 48-591 (844)
11 3t6q_A CD180 antigen; protein- 100.0 8.3E-53 2.8E-57 505.2 31.6 478 76-561 57-572 (606)
12 3vq2_A TLR4, TOLL-like recepto 100.0 8.5E-52 2.9E-56 496.4 30.2 475 79-570 14-532 (606)
13 2z63_A TOLL-like receptor 4, v 100.0 6.6E-52 2.3E-56 493.8 28.8 472 76-558 28-540 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-50 4.6E-55 480.1 28.1 478 63-554 3-515 (549)
15 4eco_A Uncharacterized protein 100.0 8.4E-51 2.9E-55 487.4 22.0 437 100-575 81-603 (636)
16 2z63_A TOLL-like receptor 4, v 100.0 2.1E-49 7.1E-54 472.3 32.8 477 85-577 16-536 (570)
17 2z81_A CD282 antigen, TOLL-lik 100.0 1.5E-49 5E-54 471.2 25.9 484 70-576 3-514 (549)
18 4ecn_A Leucine-rich repeat pro 100.0 1.2E-49 4E-54 484.2 24.6 440 100-576 323-870 (876)
19 4gt4_A Tyrosine-protein kinase 100.0 2.6E-50 8.9E-55 434.0 16.5 244 691-935 27-295 (308)
20 4asz_A BDNF/NT-3 growth factor 100.0 2.8E-50 9.6E-55 431.8 15.6 244 690-935 13-278 (299)
21 2z7x_B TOLL-like receptor 1, v 100.0 1.7E-49 5.7E-54 467.2 21.7 456 79-557 3-489 (520)
22 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.3E-50 1.1E-54 429.4 14.1 241 690-934 32-279 (311)
23 4aoj_A High affinity nerve gro 100.0 1.5E-49 5.1E-54 432.3 18.5 244 690-935 41-308 (329)
24 3omv_A RAF proto-oncogene seri 100.0 1.9E-49 6.6E-54 425.0 17.8 242 689-935 35-289 (307)
25 4b9d_A Serine/threonine-protei 100.0 2E-49 6.8E-54 430.6 17.5 243 689-935 23-272 (350)
26 4fih_A Serine/threonine-protei 100.0 8.8E-49 3E-53 424.8 17.7 236 691-934 75-318 (346)
27 2z7x_B TOLL-like receptor 1, v 100.0 5E-48 1.7E-52 454.6 21.7 453 103-577 3-486 (520)
28 3hyh_A Carbon catabolite-derep 100.0 3.9E-48 1.3E-52 408.0 18.4 237 691-934 14-257 (275)
29 3fpq_A Serine/threonine-protei 100.0 5.3E-48 1.8E-52 410.8 19.3 234 693-935 29-278 (290)
30 4g8a_A TOLL-like receptor 4; l 100.0 3.5E-46 1.2E-50 450.6 32.9 519 48-577 8-585 (635)
31 4fie_A Serine/threonine-protei 100.0 1.2E-47 4E-52 426.3 18.4 237 690-934 151-395 (423)
32 4g3f_A NF-kappa-beta-inducing 100.0 5E-48 1.7E-52 417.8 15.0 235 691-935 59-305 (336)
33 4ase_A Vascular endothelial gr 100.0 4.5E-48 1.5E-52 423.9 14.4 246 689-935 63-336 (353)
34 3ubd_A Ribosomal protein S6 ki 100.0 3.2E-48 1.1E-52 414.4 11.7 239 690-934 24-271 (304)
35 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.9E-47 2.7E-51 448.2 22.1 458 79-559 34-520 (562)
36 4g31_A Eukaryotic translation 100.0 6.1E-46 2.1E-50 399.0 19.2 240 691-934 6-274 (299)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.6E-45 5.3E-50 437.1 22.1 455 102-577 33-515 (562)
38 3hmm_A TGF-beta receptor type- 100.0 1.8E-45 6.1E-50 397.7 15.4 237 692-935 5-286 (303)
39 3v47_A TOLL-like receptor 5B a 100.0 2E-44 6.8E-49 416.6 24.5 378 100-558 30-417 (455)
40 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-44 5.6E-49 394.2 19.2 295 31-331 3-306 (313)
41 3v47_A TOLL-like receptor 5B a 100.0 8.7E-44 3E-48 411.3 26.2 386 103-577 13-413 (455)
42 4b99_A Mitogen-activated prote 100.0 5.6E-44 1.9E-48 398.5 19.9 241 690-934 54-339 (398)
43 1jl5_A Outer protein YOPM; leu 100.0 9.4E-43 3.2E-47 399.2 24.5 388 76-554 11-416 (454)
44 4f9c_A Cell division cycle 7-r 100.0 4E-43 1.4E-47 387.7 18.6 199 690-897 21-251 (361)
45 3v5w_A G-protein coupled recep 100.0 4.1E-43 1.4E-47 406.5 19.0 239 689-934 188-439 (689)
46 1jl5_A Outer protein YOPM; leu 100.0 5.6E-42 1.9E-46 392.8 23.7 391 94-573 5-410 (454)
47 4g8a_A TOLL-like receptor 4; l 100.0 3.4E-41 1.1E-45 406.9 29.0 472 76-561 76-592 (635)
48 3bz5_A Internalin-J, INLJ; leu 100.0 8.4E-41 2.9E-45 383.4 26.4 363 88-554 30-392 (457)
49 3uto_A Twitchin; kinase, muscl 100.0 1.9E-41 6.3E-46 397.3 18.1 238 690-934 157-405 (573)
50 1o6v_A Internalin A; bacterial 100.0 4E-39 1.4E-43 372.6 30.3 346 98-550 44-389 (466)
51 1o6v_A Internalin A; bacterial 100.0 4.7E-39 1.6E-43 372.0 29.6 344 76-502 46-389 (466)
52 3zgw_A Maternal embryonic leuc 100.0 2.2E-40 7.4E-45 365.4 17.2 242 690-935 10-256 (347)
53 3fe3_A MAP/microtubule affinit 100.0 4.6E-40 1.6E-44 360.9 18.8 240 690-935 15-260 (328)
54 3fxz_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 352.5 21.6 239 689-935 19-265 (297)
55 3bz5_A Internalin-J, INLJ; leu 100.0 7.4E-39 2.5E-43 367.3 26.6 355 76-534 42-396 (457)
56 2psq_A Fibroblast growth facto 100.0 9E-40 3.1E-44 365.4 18.0 246 689-935 80-353 (370)
57 3o6n_A APL1; leucine-rich repe 100.0 9.4E-39 3.2E-43 360.9 26.1 336 123-577 44-379 (390)
58 3tki_A Serine/threonine-protei 100.0 6.6E-40 2.3E-44 359.6 16.0 243 690-935 7-257 (323)
59 2id5_A Lingo-1, leucine rich r 100.0 4.5E-39 1.5E-43 373.9 21.6 348 176-577 14-361 (477)
60 1o6l_A RAC-beta serine/threoni 100.0 5.1E-39 1.7E-43 353.5 20.0 237 690-932 5-248 (337)
61 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.4E-39 8.2E-44 358.5 16.9 239 690-934 23-269 (353)
62 3cbl_A C-FES, proto-oncogene t 100.0 7.4E-40 2.5E-44 367.5 12.4 244 689-935 113-363 (377)
63 3p86_A Serine/threonine-protei 100.0 2.3E-39 8E-44 352.9 16.0 243 689-935 36-287 (309)
64 2yab_A Death-associated protei 100.0 7.9E-39 2.7E-43 355.3 20.2 239 689-934 11-267 (361)
65 1xjd_A Protein kinase C, theta 100.0 5.5E-39 1.9E-43 354.2 18.2 240 690-935 17-264 (345)
66 3s95_A LIMK-1, LIM domain kina 100.0 1E-38 3.5E-43 348.7 19.9 243 689-935 9-271 (310)
67 3oja_B Anopheles plasmodium-re 100.0 8.1E-38 2.8E-42 372.7 27.4 336 123-577 50-385 (597)
68 3kul_A Ephrin type-A receptor 100.0 6.3E-39 2.2E-43 352.3 16.3 244 689-935 48-302 (325)
69 4eqm_A Protein kinase; transfe 100.0 1.4E-38 4.8E-43 344.5 18.0 240 689-933 10-261 (294)
70 1fot_A TPK1 delta, CAMP-depend 100.0 1.7E-38 5.8E-43 346.9 18.4 235 690-933 6-247 (318)
71 3l9p_A Anaplastic lymphoma kin 100.0 4.1E-39 1.4E-43 359.8 13.5 246 689-935 70-334 (367)
72 3niz_A Rhodanese family protei 100.0 1.8E-38 6.1E-43 346.6 18.2 242 689-935 20-296 (311)
73 4fr4_A YANK1, serine/threonine 100.0 2.2E-38 7.4E-43 353.6 19.1 238 690-933 15-264 (384)
74 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.9E-39 9.9E-44 355.0 11.9 239 690-935 9-254 (336)
75 2i0e_A Protein kinase C-beta I 100.0 1.8E-38 6E-43 351.3 18.2 239 690-934 20-266 (353)
76 2id5_A Lingo-1, leucine rich r 100.0 8.7E-38 3E-42 363.1 24.8 322 126-502 13-334 (477)
77 4hcu_A Tyrosine-protein kinase 100.0 1.5E-38 5.1E-43 339.9 16.7 240 690-935 10-255 (269)
78 1tki_A Titin; serine kinase, m 100.0 3.2E-38 1.1E-42 345.8 19.7 237 690-934 5-252 (321)
79 2bdw_A Hypothetical protein K1 100.0 3.4E-38 1.2E-42 351.3 20.0 239 689-934 28-279 (362)
80 2y0a_A Death-associated protei 100.0 5E-38 1.7E-42 345.3 21.0 239 690-935 11-267 (326)
81 2qol_A Ephrin receptor; recept 100.0 9.1E-39 3.1E-43 357.5 15.4 244 689-935 44-298 (373)
82 2c30_A Serine/threonine-protei 100.0 3.1E-38 1E-42 346.2 19.2 236 692-935 47-290 (321)
83 2pmi_A Negative RE, cyclin-dep 100.0 2.9E-38 9.8E-43 346.0 18.8 242 690-934 5-288 (317)
84 3c0i_A Peripheral plasma membr 100.0 2.1E-38 7.1E-43 352.0 17.9 244 689-935 23-282 (351)
85 1ob3_A PFPK5, cell division co 100.0 1.9E-38 6.7E-43 342.6 17.1 240 691-935 3-276 (288)
86 4dc2_A Protein kinase C IOTA t 100.0 2.8E-38 9.7E-43 353.8 18.8 240 689-934 51-307 (396)
87 3qd2_B Eukaryotic translation 100.0 1E-38 3.6E-43 352.4 15.2 245 690-935 6-321 (332)
88 2qkw_B Protein kinase; three-h 100.0 4.1E-38 1.4E-42 345.7 19.8 244 690-935 39-304 (321)
89 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.8E-38 9.6E-43 349.8 18.5 235 690-933 41-282 (350)
90 3a62_A Ribosomal protein S6 ki 100.0 3.3E-38 1.1E-42 346.9 19.0 239 690-934 17-266 (327)
91 3a8x_A Protein kinase C IOTA t 100.0 4E-38 1.4E-42 348.1 19.6 239 690-934 9-264 (345)
92 4euu_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 347.3 17.7 244 689-935 8-298 (319)
93 1luf_A Muscle-specific tyrosin 100.0 1.3E-38 4.3E-43 353.5 15.4 246 689-935 46-324 (343)
94 2zv2_A Calcium/calmodulin-depe 100.0 2.1E-38 7.2E-43 344.2 16.7 240 690-935 13-288 (298)
95 3soc_A Activin receptor type-2 100.0 5.1E-39 1.7E-43 352.9 11.6 240 689-935 23-307 (322)
96 3vhe_A Vascular endothelial gr 100.0 8.6E-39 2.9E-43 357.2 13.6 247 688-935 20-344 (359)
97 3lb7_A RAF proto-oncogene seri 100.0 4.3E-38 1.5E-42 342.7 18.7 243 688-935 34-289 (307)
98 3soa_A Calcium/calmodulin-depe 100.0 4.2E-38 1.4E-42 358.6 19.5 240 689-934 10-262 (444)
99 3tt0_A Basic fibroblast growth 100.0 2.4E-38 8.2E-43 356.0 17.2 246 689-935 68-341 (382)
100 2yex_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 337.2 18.6 243 690-935 7-257 (276)
101 1rjb_A FL cytokine receptor; k 100.0 1.4E-38 4.9E-43 353.1 14.9 247 688-935 43-323 (344)
102 2ivs_A Proto-oncogene tyrosine 100.0 1.9E-38 6.5E-43 347.4 15.6 246 689-935 22-300 (314)
103 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.8E-38 9.7E-43 337.5 16.1 241 689-935 7-253 (268)
104 2r5t_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 351.0 17.6 240 689-934 37-284 (373)
105 3o0g_A Cell division protein k 100.0 8.2E-38 2.8E-42 338.4 19.6 239 691-934 3-277 (292)
106 3poz_A Epidermal growth factor 100.0 2.2E-38 7.7E-43 348.5 15.1 244 688-935 13-267 (327)
107 1t46_A HOMO sapiens V-KIT hard 100.0 4E-38 1.4E-42 344.6 16.7 246 689-935 22-296 (313)
108 3gen_A Tyrosine-protein kinase 100.0 4.9E-38 1.7E-42 338.6 16.8 241 689-935 23-269 (283)
109 1qcf_A Haematopoetic cell kina 100.0 2.9E-38 9.9E-43 363.3 15.7 242 688-935 186-433 (454)
110 4aw2_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 355.8 17.7 242 690-934 74-333 (437)
111 2eue_A Carbon catabolite derep 100.0 9.7E-38 3.3E-42 334.7 18.2 239 690-935 13-258 (275)
112 2i1m_A Macrophage colony-stimu 100.0 2.4E-38 8.4E-43 349.6 13.8 246 689-935 45-315 (333)
113 3gni_B Strad alpha; kinase fol 100.0 1.1E-37 3.7E-42 352.0 19.3 246 689-935 24-329 (389)
114 3v8s_A RHO-associated protein 100.0 3.5E-38 1.2E-42 355.1 15.2 240 690-934 69-324 (410)
115 2pvf_A Fibroblast growth facto 100.0 8E-38 2.7E-42 345.4 17.6 246 689-935 34-307 (334)
116 2y94_A 5'-AMP-activated protei 100.0 2.1E-38 7.3E-43 363.2 13.2 240 690-935 16-262 (476)
117 3ork_A Serine/threonine protei 100.0 2.5E-38 8.5E-43 345.7 13.1 241 690-934 12-268 (311)
118 3kex_A Receptor tyrosine-prote 100.0 2.4E-38 8.2E-43 348.1 12.9 243 689-935 12-265 (325)
119 2w4o_A Calcium/calmodulin-depe 100.0 1.1E-37 3.6E-42 345.8 18.0 236 689-934 52-300 (349)
120 1opk_A P150, C-ABL, proto-onco 100.0 6E-38 2E-42 364.1 16.7 242 689-935 219-467 (495)
121 2vd5_A DMPK protein; serine/th 100.0 6.1E-38 2.1E-42 353.4 16.3 239 690-932 61-317 (412)
122 1kob_A Twitchin; kinase, intra 100.0 1.5E-37 5.1E-42 348.2 19.0 239 690-935 51-300 (387)
123 3uc3_A Serine/threonine-protei 100.0 8.5E-38 2.9E-42 348.2 17.0 239 689-935 19-270 (361)
124 3qup_A Tyrosine-protein kinase 100.0 5.1E-38 1.8E-42 345.4 14.9 246 689-935 22-287 (323)
125 3uim_A Brassinosteroid insensi 100.0 1.7E-38 5.8E-43 349.7 10.5 245 689-935 29-300 (326)
126 4aaa_A Cyclin-dependent kinase 100.0 3.2E-37 1.1E-41 340.2 20.4 247 684-935 19-302 (331)
127 3is5_A Calcium-dependent prote 100.0 9.9E-38 3.4E-42 336.4 16.0 242 689-935 21-274 (285)
128 2zmd_A Dual specificity protei 100.0 1.1E-37 3.7E-42 350.9 17.0 241 690-935 56-316 (390)
129 2x4f_A Myosin light chain kina 100.0 1.3E-37 4.5E-42 347.8 17.4 235 693-934 92-337 (373)
130 1k9a_A Carboxyl-terminal SRC k 100.0 9.4E-38 3.2E-42 358.4 16.6 236 689-935 192-434 (450)
131 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.6E-38 5.4E-43 355.5 9.9 240 689-933 64-325 (365)
132 3oz6_A Mitogen-activated prote 100.0 2E-37 6.8E-42 349.6 18.7 240 690-934 9-323 (388)
133 4agu_A Cyclin-dependent kinase 100.0 2.6E-37 8.7E-42 337.9 18.8 240 691-935 4-280 (311)
134 1p4o_A Insulin-like growth fac 100.0 5.2E-38 1.8E-42 345.2 13.3 246 689-935 24-288 (322)
135 2nru_A Interleukin-1 receptor- 100.0 2.2E-37 7.4E-42 337.8 18.1 241 692-935 33-295 (307)
136 1mp8_A Focal adhesion kinase 1 100.0 8.7E-38 3E-42 336.2 14.7 242 689-935 14-265 (281)
137 3kn6_A Ribosomal protein S6 ki 100.0 3.8E-37 1.3E-41 338.0 20.0 232 694-935 15-266 (325)
138 3dbq_A Dual specificity protei 100.0 1.2E-37 4E-42 345.2 16.1 240 690-934 9-268 (343)
139 3a7i_A MST3 kinase, serine/thr 100.0 3.7E-37 1.3E-41 335.2 19.6 245 684-935 16-266 (303)
140 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.4E-37 8.1E-42 358.3 19.1 242 690-934 185-438 (543)
141 3t9t_A Tyrosine-protein kinase 100.0 1.5E-37 5.2E-42 331.7 16.1 240 690-935 8-253 (267)
142 1u59_A Tyrosine-protein kinase 100.0 2E-37 6.7E-42 334.6 17.0 238 694-935 14-261 (287)
143 2a2a_A Death-associated protei 100.0 4.1E-37 1.4E-41 337.7 19.6 240 689-935 11-268 (321)
144 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.6E-38 2.6E-42 359.4 14.2 241 689-935 183-429 (452)
145 4ejn_A RAC-alpha serine/threon 100.0 8.8E-38 3E-42 358.9 14.7 238 689-932 147-392 (446)
146 2acx_A G protein-coupled recep 100.0 1.1E-37 3.7E-42 361.7 15.4 240 690-934 184-434 (576)
147 3lzb_A Epidermal growth factor 100.0 1.1E-37 3.8E-42 342.7 14.8 243 689-935 14-267 (327)
148 3op5_A Serine/threonine-protei 100.0 1.5E-37 5.3E-42 347.3 16.1 243 689-935 34-318 (364)
149 1u5q_A Serine/threonine protei 100.0 2.7E-37 9.2E-42 342.1 17.8 237 690-935 54-301 (348)
150 2izr_A Casein kinase I isoform 100.0 2E-37 6.9E-42 341.6 16.7 238 691-935 10-270 (330)
151 3fdn_A Serine/threonine-protei 100.0 2.1E-37 7.2E-42 332.9 16.4 238 690-935 9-253 (279)
152 3dls_A PAS domain-containing s 100.0 3.3E-38 1.1E-42 347.9 10.3 239 689-935 23-270 (335)
153 4f0f_A Serine/threonine-protei 100.0 6.3E-37 2.1E-41 330.7 20.0 238 689-935 18-278 (287)
154 3kk8_A Calcium/calmodulin depe 100.0 5.1E-37 1.7E-41 330.9 18.9 239 690-935 6-257 (284)
155 3ugc_A Tyrosine-protein kinase 100.0 5.7E-38 2E-42 340.2 11.2 243 689-935 9-280 (295)
156 3c1x_A Hepatocyte growth facto 100.0 8.6E-38 2.9E-42 349.1 12.8 242 691-935 90-344 (373)
157 2xir_A Vascular endothelial gr 100.0 1.5E-37 5.3E-42 340.5 14.6 246 689-935 26-299 (316)
158 3mtl_A Cell division protein k 100.0 8.5E-38 2.9E-42 343.4 12.5 239 691-934 3-276 (324)
159 3p1a_A MYT1 kinase, membrane-a 100.0 2.4E-37 8.1E-42 337.8 15.9 238 690-935 57-300 (311)
160 2owb_A Serine/threonine-protei 100.0 5.7E-37 1.9E-41 338.5 19.0 241 689-935 40-287 (335)
161 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.5E-37 8.5E-42 340.5 16.1 240 689-934 33-313 (329)
162 3bhy_A Death-associated protei 100.0 8.8E-37 3E-41 328.8 19.6 238 691-935 6-261 (283)
163 3og7_A AKAP9-BRAF fusion prote 100.0 3.1E-37 1.1E-41 333.3 15.6 242 689-935 23-277 (289)
164 1csn_A Casein kinase-1; phosph 100.0 7.4E-37 2.5E-41 332.0 18.5 239 690-935 10-272 (298)
165 2rku_A Serine/threonine-protei 100.0 1E-36 3.6E-41 330.1 19.6 241 689-935 14-261 (294)
166 3an0_A Dual specificity mitoge 100.0 4.5E-37 1.5E-41 340.4 17.1 242 690-935 51-306 (340)
167 3dtc_A Mitogen-activated prote 100.0 3.2E-37 1.1E-41 329.9 15.3 236 690-935 7-262 (271)
168 2yfx_A Tyrosine-protein kinase 100.0 1.9E-37 6.5E-42 341.4 13.6 248 687-935 27-293 (327)
169 2eva_A TAK1 kinase - TAB1 chim 100.0 4.1E-37 1.4E-41 335.2 16.1 235 689-935 7-252 (307)
170 4eut_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 351.4 12.7 244 689-935 8-298 (396)
171 3f3z_A Calcium/calmodulin-depe 100.0 9.9E-37 3.4E-41 327.3 18.6 237 689-934 8-256 (277)
172 3llt_A Serine/threonine kinase 100.0 1.2E-36 4E-41 339.9 19.9 200 689-898 34-264 (360)
173 2h6d_A 5'-AMP-activated protei 100.0 6.1E-37 2.1E-41 328.7 16.9 240 690-935 11-257 (276)
174 1mqb_A Ephrin type-A receptor 100.0 4.1E-37 1.4E-41 339.3 15.9 242 691-935 45-298 (333)
175 3hko_A Calcium/calmodulin-depe 100.0 3E-37 1E-41 342.7 14.8 246 689-934 25-325 (345)
176 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-36 3.6E-41 333.9 18.8 240 691-935 32-299 (318)
177 2ozo_A Tyrosine-protein kinase 100.0 3.5E-37 1.2E-41 366.0 16.1 235 697-935 343-587 (613)
178 4e5w_A Tyrosine-protein kinase 100.0 2.7E-37 9.4E-42 336.1 13.9 244 689-935 20-291 (302)
179 3q4u_A Activin receptor type-1 100.0 4.9E-37 1.7E-41 333.9 15.7 238 689-935 7-291 (301)
180 4fvq_A Tyrosine-protein kinase 100.0 2.8E-37 9.6E-42 333.8 13.7 238 689-935 7-264 (289)
181 3rp9_A Mitogen-activated prote 100.0 6E-37 2.1E-41 353.5 17.3 203 690-896 53-298 (458)
182 3g33_A Cell division protein k 100.0 1.1E-36 3.7E-41 332.4 18.2 239 690-934 9-291 (308)
183 3f66_A Hepatocyte growth facto 100.0 6.6E-37 2.2E-41 332.4 16.4 244 689-935 24-280 (298)
184 3cok_A Serine/threonine-protei 100.0 1.7E-37 5.6E-42 333.5 11.4 241 690-935 11-258 (278)
185 3kmu_A ILK, integrin-linked ki 100.0 6.1E-37 2.1E-41 327.7 15.7 237 690-935 10-259 (271)
186 2wqm_A Serine/threonine-protei 100.0 1.5E-36 5.2E-41 331.6 19.2 245 688-935 30-286 (310)
187 3cc6_A Protein tyrosine kinase 100.0 6E-37 2.1E-41 329.7 15.7 242 689-935 11-262 (281)
188 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-37 7.7E-42 362.6 13.3 241 689-935 266-512 (535)
189 3pls_A Macrophage-stimulating 100.0 9.7E-37 3.3E-41 331.1 17.3 243 690-935 21-276 (298)
190 2ac3_A MAP kinase-interacting 100.0 1.6E-36 5.6E-41 332.3 19.2 240 691-934 13-290 (316)
191 3nsz_A CK II alpha, casein kin 100.0 2.8E-36 9.6E-41 332.6 21.1 235 687-934 33-314 (330)
192 2v62_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 341.2 14.4 242 689-935 36-317 (345)
193 2vgo_A Serine/threonine-protei 100.0 9.7E-37 3.3E-41 328.6 16.9 238 690-935 14-258 (284)
194 1ua2_A CAK, cell division prot 100.0 9.1E-37 3.1E-41 338.5 17.0 240 690-934 10-286 (346)
195 2qr7_A Ribosomal protein S6 ki 100.0 6.5E-37 2.2E-41 337.9 15.7 234 690-934 22-272 (342)
196 3mi9_A Cell division protein k 100.0 1.9E-36 6.5E-41 336.9 19.4 243 689-934 16-306 (351)
197 1nxk_A MAP kinase-activated pr 100.0 8.3E-37 2.9E-41 344.7 16.6 229 696-935 68-317 (400)
198 3ttj_A Mitogen-activated prote 100.0 7.9E-37 2.7E-41 351.1 16.7 236 689-934 61-350 (464)
199 3eqc_A Dual specificity mitoge 100.0 7.5E-37 2.6E-41 341.5 16.0 239 689-935 32-320 (360)
200 3brb_A Proto-oncogene tyrosine 100.0 8.7E-37 3E-41 334.0 16.3 246 689-935 33-297 (313)
201 1qpc_A LCK kinase; alpha beta 100.0 7.7E-37 2.6E-41 328.5 15.4 241 689-935 12-258 (279)
202 3pfq_A PKC-B, PKC-beta, protei 100.0 8.2E-37 2.8E-41 366.1 17.3 239 690-934 341-587 (674)
203 1vzo_A Ribosomal protein S6 ki 100.0 4.6E-37 1.6E-41 341.8 13.9 241 690-934 54-311 (355)
204 3kfa_A Tyrosine-protein kinase 100.0 8.2E-37 2.8E-41 329.9 15.5 242 689-935 12-260 (288)
205 1cm8_A Phosphorylated MAP kina 100.0 1.7E-36 5.7E-41 338.5 18.3 235 690-934 25-302 (367)
206 2h34_A Serine/threonine-protei 100.0 1.6E-36 5.4E-41 331.0 17.6 240 690-934 34-284 (309)
207 4e7w_A Glycogen synthase kinas 100.0 9.5E-37 3.3E-41 343.9 16.4 238 689-934 39-316 (394)
208 2a19_B Interferon-induced, dou 100.0 2.3E-37 7.7E-42 333.6 10.8 237 689-935 10-263 (284)
209 1x8b_A WEE1HU, WEE1-like prote 100.0 7.6E-37 2.6E-41 330.2 14.9 241 689-935 10-275 (289)
210 3i6u_A CDS1, serine/threonine- 100.0 7.4E-37 2.5E-41 347.6 15.5 239 689-934 134-394 (419)
211 1t4h_A Serine/threonine-protei 100.0 3E-36 1E-40 325.8 19.5 236 691-935 27-278 (290)
212 3qyz_A Mitogen-activated prote 100.0 2E-36 6.9E-41 338.2 18.7 239 691-934 28-308 (364)
213 1xbb_A Tyrosine-protein kinase 100.0 7.2E-37 2.5E-41 330.8 14.6 240 691-935 17-268 (291)
214 1fvr_A Tyrosine-protein kinase 100.0 4.6E-37 1.6E-41 338.3 13.2 244 688-935 23-289 (327)
215 2vwi_A Serine/threonine-protei 100.0 2.3E-37 7.9E-42 336.9 10.7 246 690-935 15-283 (303)
216 3byv_A Rhoptry kinase; malaria 100.0 3.6E-38 1.2E-42 354.1 4.3 239 690-935 73-355 (377)
217 2clq_A Mitogen-activated prote 100.0 2.5E-36 8.7E-41 327.3 18.7 241 692-935 24-274 (295)
218 3com_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 329.7 19.5 240 688-935 27-274 (314)
219 1j1b_A Glycogen synthase kinas 100.0 1.4E-36 4.8E-41 345.4 17.0 237 689-934 53-331 (420)
220 3q5i_A Protein kinase; CDPK, m 100.0 2.7E-36 9.2E-41 352.0 19.7 237 690-934 36-296 (504)
221 2y7j_A Phosphorylase B kinase 100.0 3.1E-36 1.1E-40 336.2 19.2 239 690-934 94-354 (365)
222 4fl3_A Tyrosine-protein kinase 100.0 9.7E-37 3.3E-41 363.0 15.7 236 695-935 374-620 (635)
223 3mwu_A Calmodulin-domain prote 100.0 2.3E-36 7.8E-41 351.1 18.4 238 689-934 21-271 (486)
224 2r3i_A Cell division protein k 100.0 2.5E-36 8.7E-41 328.0 17.5 240 691-934 4-278 (299)
225 3nyv_A Calmodulin-domain prote 100.0 1.7E-36 5.9E-41 352.3 16.9 238 689-934 25-276 (484)
226 3lm5_A Serine/threonine-protei 100.0 2.8E-36 9.7E-41 331.7 17.6 240 691-935 29-283 (327)
227 3o6n_A APL1; leucine-rich repe 100.0 4.1E-35 1.4E-39 331.1 27.2 283 53-354 3-285 (390)
228 2jam_A Calcium/calmodulin-depe 100.0 2.8E-36 9.6E-41 328.4 17.1 237 690-935 9-257 (304)
229 3fme_A Dual specificity mitoge 100.0 1.5E-36 5E-41 328.3 14.6 242 690-935 7-262 (290)
230 3n9x_A Phosphotransferase; mal 100.0 3.7E-36 1.3E-40 343.5 18.7 200 690-893 26-252 (432)
231 3lij_A Calcium/calmodulin depe 100.0 2.8E-36 9.5E-41 350.9 17.8 237 690-934 37-286 (494)
232 2w5a_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 326.8 13.2 243 690-935 6-263 (279)
233 2wtk_C Serine/threonine-protei 100.0 3.9E-36 1.3E-40 327.5 17.2 244 690-935 5-259 (305)
234 2j7t_A Serine/threonine-protei 100.0 2.2E-36 7.5E-41 329.0 15.0 242 689-935 18-271 (302)
235 1phk_A Phosphorylase kinase; g 100.0 6.8E-36 2.3E-40 324.4 18.4 239 690-934 17-278 (298)
236 2fst_X Mitogen-activated prote 100.0 3.5E-36 1.2E-40 335.5 16.4 235 690-934 29-306 (367)
237 3eb0_A Putative uncharacterize 100.0 3.4E-36 1.2E-40 338.7 16.4 236 690-934 7-316 (383)
238 2ycf_A Serine/threonine-protei 100.0 2.3E-36 8E-41 331.9 14.6 240 689-935 9-270 (322)
239 3lxl_A Tyrosine-protein kinase 100.0 1.4E-36 4.8E-41 334.4 12.7 243 689-935 22-292 (327)
240 2pml_X PFPK7, Ser/Thr protein 100.0 2.1E-36 7E-41 336.4 14.1 240 690-935 31-318 (348)
241 2jii_A Serine/threonine-protei 100.0 2E-36 6.8E-41 336.7 13.7 238 689-935 41-325 (352)
242 2b9h_A MAP kinase FUS3, mitoge 100.0 5.7E-36 1.9E-40 333.5 17.2 240 690-934 11-300 (353)
243 3mdy_A Bone morphogenetic prot 100.0 9.8E-36 3.3E-40 329.3 19.0 237 689-935 36-320 (337)
244 4hgt_A Casein kinase I isoform 100.0 6.6E-36 2.2E-40 324.2 17.0 239 690-935 9-269 (296)
245 2xrw_A Mitogen-activated prote 100.0 7.7E-36 2.6E-40 334.2 18.1 235 690-934 25-313 (371)
246 3rgf_A Cyclin-dependent kinase 100.0 7.5E-36 2.6E-40 338.6 17.7 202 692-897 22-240 (405)
247 3pg1_A Mitogen-activated prote 100.0 6E-36 2.1E-40 334.5 16.5 239 690-934 22-311 (362)
248 1byg_A CSK, protein (C-termina 100.0 1.4E-36 4.9E-41 326.2 11.0 236 689-935 20-262 (278)
249 3uzp_A CKI-delta, CKID, casein 100.0 7.7E-36 2.6E-40 323.7 16.8 239 690-935 9-269 (296)
250 2i6l_A Mitogen-activated prote 100.0 9.8E-36 3.4E-40 326.7 17.5 240 690-935 11-301 (320)
251 3cek_A Dual specificity protei 100.0 5.9E-36 2E-40 327.3 15.6 241 690-935 28-288 (313)
252 3ll6_A Cyclin G-associated kin 100.0 3.2E-36 1.1E-40 333.2 13.2 245 689-935 27-297 (337)
253 2x7f_A TRAF2 and NCK-interacti 100.0 7.8E-36 2.7E-40 328.4 16.1 242 689-935 23-282 (326)
254 4exu_A Mitogen-activated prote 100.0 1.3E-35 4.3E-40 332.4 17.9 234 690-934 42-318 (371)
255 3kvw_A DYRK2, dual specificity 100.0 1.3E-35 4.4E-40 338.2 18.2 200 690-899 97-305 (429)
256 3q60_A ROP5B; pseudokinase, tr 100.0 5.2E-37 1.8E-41 344.0 6.6 237 691-935 63-348 (371)
257 1ogq_A PGIP-2, polygalacturona 100.0 1E-35 3.5E-40 324.6 16.5 259 293-581 50-312 (313)
258 2buj_A Serine/threonine-protei 100.0 6.3E-36 2.2E-40 327.8 14.3 246 689-935 28-295 (317)
259 4fcg_A Uncharacterized protein 100.0 1.3E-35 4.3E-40 325.8 16.5 270 30-305 23-313 (328)
260 2w1i_A JAK2; chromosomal rearr 100.0 1.1E-35 3.8E-40 327.0 14.8 243 689-935 40-311 (326)
261 2wei_A Calmodulin-domain prote 100.0 2.3E-35 7.9E-40 318.3 17.0 238 689-934 21-271 (287)
262 3sv0_A Casein kinase I-like; t 100.0 4.7E-35 1.6E-39 336.2 20.5 239 690-935 7-267 (483)
263 1u46_A ACK-1, activated CDC42 100.0 5.5E-36 1.9E-40 323.9 12.0 243 689-935 17-273 (291)
264 3e3p_A Protein kinase, putativ 100.0 2.2E-35 7.7E-40 329.6 17.1 241 688-934 21-309 (360)
265 1blx_A Cyclin-dependent kinase 100.0 3.1E-35 1.1E-39 323.7 17.4 240 689-934 10-291 (326)
266 2j0j_A Focal adhesion kinase 1 100.0 1.5E-35 5.3E-40 354.0 16.2 241 690-935 390-640 (656)
267 4fmz_A Internalin; leucine ric 100.0 3.8E-34 1.3E-38 317.9 26.3 307 96-477 40-346 (347)
268 3g2f_A Bone morphogenetic prot 100.0 2.9E-36 9.8E-41 333.4 8.9 237 690-935 13-307 (336)
269 1zy4_A Serine/threonine-protei 100.0 3.2E-35 1.1E-39 319.8 17.0 239 690-935 6-279 (303)
270 3gxj_A TGF-beta receptor type- 100.0 4.8E-37 1.6E-41 334.4 2.6 236 691-935 4-286 (303)
271 4fmz_A Internalin; leucine ric 100.0 3.7E-34 1.3E-38 318.0 25.6 309 118-501 38-346 (347)
272 3a99_A Proto-oncogene serine/t 100.0 2.4E-36 8.2E-41 331.2 7.6 238 689-935 42-289 (320)
273 1b6c_B TGF-B superfamily recep 100.0 4.6E-35 1.6E-39 324.7 17.8 238 689-935 41-325 (342)
274 1z57_A Dual specificity protei 100.0 5.8E-35 2E-39 323.3 18.3 200 690-899 14-240 (339)
275 3coi_A Mitogen-activated prote 100.0 4.9E-35 1.7E-39 325.7 17.6 234 690-934 24-300 (353)
276 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.4E-36 2.2E-40 328.0 10.2 242 689-935 32-291 (319)
277 3oja_B Anopheles plasmodium-re 100.0 3.4E-34 1.2E-38 341.5 25.3 349 51-478 7-359 (597)
278 3fhr_A MAP kinase-activated pr 100.0 3.7E-35 1.3E-39 323.9 15.6 235 690-935 28-283 (336)
279 3aln_A Dual specificity mitoge 100.0 1.6E-35 5.4E-40 326.1 12.5 243 689-935 21-281 (327)
280 1wak_A Serine/threonine-protei 100.0 4.1E-35 1.4E-39 332.2 15.6 198 690-897 37-297 (397)
281 2dyl_A Dual specificity mitoge 100.0 9E-35 3.1E-39 318.8 16.4 241 689-935 24-279 (318)
282 2rio_A Serine/threonine-protei 100.0 3E-35 1E-39 335.9 12.0 242 688-934 13-290 (434)
283 2iwi_A Serine/threonine-protei 100.0 7.2E-36 2.5E-40 326.5 6.1 238 689-935 30-279 (312)
284 2eu9_A Dual specificity protei 100.0 2.4E-34 8.3E-39 320.5 17.6 199 690-898 19-244 (355)
285 2vx3_A Dual specificity tyrosi 100.0 3.6E-34 1.2E-38 322.0 18.8 200 690-899 54-264 (382)
286 3qa8_A MGC80376 protein; kinas 100.0 4.6E-35 1.6E-39 342.5 11.6 242 690-935 14-293 (676)
287 1q8y_A SR protein kinase; tran 100.0 8.3E-35 2.9E-39 326.7 12.4 198 690-897 19-239 (373)
288 3p23_A Serine/threonine-protei 100.0 1.3E-34 4.4E-39 329.5 13.5 238 690-934 24-278 (432)
289 2pzi_A Probable serine/threoni 100.0 2.5E-34 8.4E-39 347.4 13.9 228 690-933 80-314 (681)
290 2ft3_A Biglycan; proteoglycan, 100.0 6.5E-33 2.2E-37 305.7 22.8 242 101-354 34-277 (332)
291 1z7x_W Ribonuclease inhibitor; 100.0 4.1E-37 1.4E-41 356.0 -12.1 111 100-210 3-126 (461)
292 1xku_A Decorin; proteoglycan, 100.0 2.3E-32 7.9E-37 301.1 24.8 220 101-354 32-253 (330)
293 2ft3_A Biglycan; proteoglycan, 100.0 2E-32 7E-37 301.7 23.4 287 199-547 35-331 (332)
294 3dzo_A Rhoptry kinase domain; 100.0 2.9E-34 9.9E-39 325.6 7.2 237 691-934 79-358 (413)
295 1xku_A Decorin; proteoglycan, 100.0 6.2E-32 2.1E-36 297.6 25.6 295 174-547 32-330 (330)
296 1z7x_W Ribonuclease inhibitor; 100.0 2.4E-36 8.2E-41 349.5 -10.3 393 76-530 3-445 (461)
297 3uqc_A Probable conserved tran 100.0 2.2E-33 7.6E-38 301.7 13.0 209 690-934 31-253 (286)
298 3m2w_A MAP kinase-activated pr 100.0 1E-32 3.4E-37 299.4 16.8 212 692-935 19-252 (299)
299 2vuw_A Serine/threonine-protei 100.0 1.7E-33 5.8E-38 311.0 7.3 226 689-928 19-324 (336)
300 2z80_A TOLL-like receptor 2, v 100.0 5.6E-32 1.9E-36 300.9 14.8 283 62-359 28-319 (353)
301 3ogk_B Coronatine-insensitive 100.0 4.1E-34 1.4E-38 341.8 -5.4 451 63-546 41-548 (592)
302 2z66_A Variable lymphocyte rec 100.0 2.2E-31 7.6E-36 289.9 16.3 254 61-331 4-262 (306)
303 2z80_A TOLL-like receptor 2, v 100.0 2.5E-30 8.6E-35 287.6 14.1 260 150-478 53-315 (353)
304 3zyj_A Leucine-rich repeat-con 100.0 2.3E-29 7.7E-34 288.6 21.8 239 91-358 57-296 (440)
305 3ogk_B Coronatine-insensitive 100.0 4.5E-32 1.5E-36 324.2 -1.3 420 76-523 73-549 (592)
306 1wwl_A Monocyte differentiatio 100.0 2.6E-31 9E-36 289.8 3.3 248 98-355 41-310 (312)
307 3zyi_A Leucine-rich repeat-con 100.0 2.9E-29 1E-33 288.7 20.1 232 100-358 75-307 (452)
308 1ozn_A Reticulon 4 receptor; N 100.0 2.5E-29 8.5E-34 270.6 16.8 255 79-338 14-269 (285)
309 2z66_A Variable lymphocyte rec 100.0 5.1E-29 1.8E-33 271.2 18.9 248 201-478 11-262 (306)
310 1ozn_A Reticulon 4 receptor; N 100.0 3.3E-29 1.1E-33 269.7 16.9 229 103-359 14-243 (285)
311 1wwl_A Monocyte differentiatio 100.0 1.5E-30 5E-35 283.9 6.0 269 52-331 20-310 (312)
312 3zyi_A Leucine-rich repeat-con 100.0 1.5E-28 5E-33 282.9 21.2 229 124-379 75-305 (452)
313 3zyj_A Leucine-rich repeat-con 100.0 2E-28 6.7E-33 280.8 20.8 242 108-379 51-294 (440)
314 4fcg_A Uncharacterized protein 100.0 1.7E-28 6E-33 269.0 19.0 289 42-354 21-314 (328)
315 3g06_A SSPH2 (leucine-rich rep 100.0 5.5E-29 1.9E-33 293.4 15.6 294 50-440 9-308 (622)
316 2p1m_B Transport inhibitor res 100.0 1.7E-31 5.7E-36 319.4 -8.5 451 63-550 34-545 (594)
317 3o53_A Protein LRIM1, AGAP0063 100.0 8.1E-30 2.8E-34 278.7 5.0 248 266-554 31-281 (317)
318 2o6q_A Variable lymphocyte rec 100.0 1.1E-27 3.7E-32 255.5 19.3 217 62-283 3-219 (270)
319 3g06_A SSPH2 (leucine-rich rep 99.9 5E-27 1.7E-31 276.7 24.5 267 174-535 41-307 (622)
320 3o53_A Protein LRIM1, AGAP0063 99.9 4.5E-29 1.5E-33 272.7 5.6 257 102-424 12-270 (317)
321 4azs_A Methyltransferase WBDD; 99.9 6.2E-29 2.1E-33 291.3 5.2 186 697-892 241-437 (569)
322 2p1m_B Transport inhibitor res 99.9 4E-30 1.4E-34 307.5 -9.7 416 103-550 46-520 (594)
323 3oja_A Leucine-rich immune mol 99.9 4.1E-28 1.4E-32 280.6 6.6 234 98-346 32-267 (487)
324 3oja_A Leucine-rich immune mol 99.9 7.6E-28 2.6E-32 278.4 8.5 234 270-544 35-270 (487)
325 2z62_A TOLL-like receptor 4, v 99.9 1.5E-25 5E-30 239.9 18.2 214 100-358 28-241 (276)
326 2z62_A TOLL-like receptor 4, v 99.9 1.5E-25 5.3E-30 239.7 18.0 204 151-378 30-238 (276)
327 3rfs_A Internalin B, repeat mo 99.9 3.6E-25 1.2E-29 236.1 17.7 209 96-316 37-245 (272)
328 3rfs_A Internalin B, repeat mo 99.9 9.6E-26 3.3E-30 240.5 13.0 231 98-342 17-247 (272)
329 2o6q_A Variable lymphocyte rec 99.9 1.8E-24 6E-29 230.5 20.2 202 101-330 17-218 (270)
330 3m19_A Variable lymphocyte rec 99.9 9.1E-25 3.1E-29 230.0 17.3 191 63-260 4-194 (251)
331 3en9_A Glycoprotease, O-sialog 99.9 9.5E-26 3.2E-30 262.8 9.5 187 694-894 340-539 (540)
332 1p9a_G Platelet glycoprotein I 99.9 2.1E-24 7.2E-29 232.0 16.2 155 96-257 6-160 (290)
333 1p9a_G Platelet glycoprotein I 99.9 6.2E-24 2.1E-28 228.3 19.0 196 77-280 11-206 (290)
334 4glp_A Monocyte differentiatio 99.9 5.2E-24 1.8E-28 231.9 17.8 224 125-354 65-307 (310)
335 2ast_B S-phase kinase-associat 99.9 2.4E-26 8.1E-31 253.8 -1.9 235 63-303 36-282 (336)
336 3goz_A Leucine-rich repeat-con 99.9 1.6E-25 5.6E-30 249.4 4.6 130 201-330 2-151 (362)
337 2xwt_C Thyrotropin receptor; s 99.9 3.5E-24 1.2E-28 223.8 14.0 178 101-282 32-218 (239)
338 4ay9_X Follicle-stimulating ho 99.9 7.3E-24 2.5E-28 234.7 15.8 245 62-326 7-255 (350)
339 4glp_A Monocyte differentiatio 99.9 4.1E-24 1.4E-28 232.7 11.4 226 100-331 64-308 (310)
340 3goz_A Leucine-rich repeat-con 99.9 3.3E-25 1.1E-29 246.9 2.2 256 82-358 4-301 (362)
341 2xwt_C Thyrotropin receptor; s 99.9 7.4E-24 2.5E-28 221.4 12.3 179 124-306 31-218 (239)
342 2ca6_A RAN GTPase-activating p 99.9 6.9E-26 2.3E-30 255.0 -5.5 247 92-358 24-320 (386)
343 2ca6_A RAN GTPase-activating p 99.9 3E-25 1E-29 249.9 -0.6 245 286-553 25-320 (386)
344 2o6s_A Variable lymphocyte rec 99.9 5.4E-23 1.9E-27 209.8 15.9 186 61-269 4-189 (208)
345 1h6u_A Internalin H; cell adhe 99.9 4.1E-23 1.4E-27 224.2 13.2 193 121-330 38-230 (308)
346 1h6u_A Internalin H; cell adhe 99.9 1.1E-22 3.8E-27 220.7 16.1 195 96-307 37-231 (308)
347 3cvr_A Invasion plasmid antige 99.9 1.4E-23 4.9E-28 244.1 9.4 208 53-292 33-253 (571)
348 3m19_A Variable lymphocyte rec 99.9 3.4E-22 1.2E-26 210.3 18.5 179 101-283 15-193 (251)
349 4ay9_X Follicle-stimulating ho 99.9 1E-22 3.4E-27 225.6 14.1 241 103-352 12-257 (350)
350 2ast_B S-phase kinase-associat 99.9 9.3E-24 3.2E-28 232.9 5.7 250 247-554 49-311 (336)
351 1zar_A RIO2 kinase; serine kin 99.9 2.2E-22 7.5E-27 214.7 10.3 144 691-864 91-251 (282)
352 2o6s_A Variable lymphocyte rec 99.9 2.3E-21 7.7E-26 197.8 15.6 178 103-291 10-187 (208)
353 3cvr_A Invasion plasmid antige 99.8 5.2E-21 1.8E-25 222.6 15.3 196 101-342 60-255 (571)
354 4b8c_D Glucose-repressible alc 99.8 4.3E-22 1.5E-26 240.7 5.7 237 33-303 131-369 (727)
355 3e6j_A Variable lymphocyte rec 99.8 1.7E-20 5.7E-25 194.1 15.9 161 56-234 12-172 (229)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 3.7E-21 1.3E-25 197.6 9.5 180 394-577 13-194 (220)
357 1h6t_A Internalin B; cell adhe 99.8 1.3E-20 4.4E-25 202.6 11.7 189 102-307 26-214 (291)
358 2v9t_B SLIT homolog 2 protein 99.8 9.8E-21 3.3E-25 194.5 9.9 157 395-554 14-170 (220)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 5.3E-20 1.8E-24 189.0 14.2 132 102-258 34-166 (220)
360 1m9s_A Internalin B; cell inva 99.8 4E-20 1.4E-24 217.7 13.3 191 101-308 22-212 (605)
361 1h6t_A Internalin B; cell adhe 99.8 3.1E-20 1.1E-24 199.6 11.3 188 80-284 28-215 (291)
362 1dce_A Protein (RAB geranylger 99.8 4.8E-22 1.6E-26 232.7 -3.8 186 97-306 346-546 (567)
363 1m9s_A Internalin B; cell inva 99.8 1.4E-19 4.9E-24 213.0 16.6 198 78-292 23-220 (605)
364 2v9t_B SLIT homolog 2 protein 99.8 1.5E-19 5.2E-24 185.6 14.5 156 62-233 9-164 (220)
365 2xot_A Amphoterin-induced prot 99.8 7.7E-20 2.6E-24 203.2 13.0 109 101-210 40-149 (361)
366 1dce_A Protein (RAB geranylger 99.8 5E-22 1.7E-26 232.6 -6.0 188 290-527 346-548 (567)
367 2xot_A Amphoterin-induced prot 99.8 9E-20 3.1E-24 202.6 12.3 163 103-269 21-187 (361)
368 3e6j_A Variable lymphocyte rec 99.8 3.9E-19 1.3E-23 183.8 14.9 158 393-554 20-177 (229)
369 1xeu_A Internalin C; cellular 99.8 1.8E-19 6.1E-24 190.5 9.2 169 98-282 17-185 (263)
370 1xeu_A Internalin C; cellular 99.8 4.3E-19 1.5E-23 187.6 11.4 171 77-263 20-190 (263)
371 4ezg_A Putative uncharacterize 99.8 1.6E-18 5.4E-23 174.9 12.1 154 389-550 41-195 (197)
372 1w8a_A SLIT protein; signaling 99.8 4.1E-19 1.4E-23 178.2 7.5 131 395-528 11-142 (192)
373 4ezg_A Putative uncharacterize 99.8 1.9E-18 6.3E-23 174.3 12.1 132 120-258 40-172 (197)
374 1zth_A RIO1 serine protein kin 99.8 1.1E-18 3.9E-23 183.7 10.7 137 692-840 49-219 (258)
375 1w8a_A SLIT protein; signaling 99.7 3.5E-18 1.2E-22 171.4 11.2 156 419-577 11-167 (192)
376 4b8c_D Glucose-repressible alc 99.7 1.1E-18 3.7E-23 211.0 8.1 188 325-550 209-405 (727)
377 3sb4_A Hypothetical leucine ri 99.7 1.5E-18 5E-23 190.4 6.4 240 98-347 23-327 (329)
378 3sb4_A Hypothetical leucine ri 99.7 1.3E-17 4.6E-22 182.7 8.7 288 122-471 23-328 (329)
379 2o6r_A Variable lymphocyte rec 99.7 1.3E-16 4.4E-21 157.8 13.0 135 61-211 4-138 (177)
380 2wfh_A SLIT homolog 2 protein 99.7 2.3E-17 7.9E-22 165.3 7.7 112 441-553 32-143 (193)
381 2ell_A Acidic leucine-rich nuc 99.7 7E-17 2.4E-21 158.2 9.3 133 99-234 23-160 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 1.2E-16 4.1E-21 156.6 10.7 133 416-550 24-161 (168)
383 2je0_A Acidic leucine-rich nuc 99.7 1.6E-16 5.4E-21 152.3 9.3 128 416-545 17-149 (149)
384 4fs7_A Uncharacterized protein 99.7 3E-15 1E-19 168.2 20.8 225 112-348 59-283 (394)
385 4gyi_A RIO2 kinase; protein ki 99.7 2.3E-16 7.9E-21 171.8 11.0 140 690-840 95-265 (397)
386 2wfh_A SLIT homolog 2 protein 99.6 7.1E-16 2.4E-20 154.5 13.3 108 101-234 32-139 (193)
387 2o6r_A Variable lymphocyte rec 99.6 5.7E-16 1.9E-20 153.1 12.0 113 441-553 29-141 (177)
388 4fdw_A Leucine rich hypothetic 99.6 2.1E-15 7.2E-20 168.7 17.6 263 100-377 113-383 (401)
389 2je0_A Acidic leucine-rich nuc 99.6 1.8E-16 6E-21 152.0 6.3 129 391-521 16-149 (149)
390 4fdw_A Leucine rich hypothetic 99.6 6.7E-15 2.3E-19 164.6 18.4 268 121-429 110-383 (401)
391 4fs7_A Uncharacterized protein 99.6 3.1E-14 1.1E-18 160.0 20.7 335 135-540 58-392 (394)
392 1ds9_A Outer arm dynein; leuci 99.6 3.3E-17 1.1E-21 165.3 -4.5 152 392-550 18-186 (198)
393 1a9n_A U2A', U2A'; complex (nu 99.6 9.1E-16 3.1E-20 151.5 5.6 132 414-551 17-155 (176)
394 1ds9_A Outer arm dynein; leuci 99.6 3.3E-17 1.1E-21 165.3 -5.6 149 97-251 15-180 (198)
395 1a9n_A U2A', U2A'; complex (nu 99.6 2.7E-15 9.4E-20 148.0 6.8 104 150-257 43-152 (176)
396 3g39_A Variable lymphocyte rec 99.5 3.5E-14 1.2E-18 139.0 10.4 108 443-553 12-119 (170)
397 2r9u_A Variable lymphocyte rec 99.5 9.4E-14 3.2E-18 136.3 10.5 89 464-552 33-121 (174)
398 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.8E-18 135.4 10.4 103 127-233 12-114 (170)
399 2r9u_A Variable lymphocyte rec 99.4 2.3E-13 7.8E-18 133.6 10.5 84 151-234 35-118 (174)
400 4gt6_A Cell surface protein; l 99.4 1E-11 3.6E-16 139.3 21.8 138 112-255 51-192 (394)
401 3un9_A NLR family member X1; l 99.4 4E-15 1.4E-19 164.8 -7.5 135 100-234 72-224 (372)
402 4gt6_A Cell surface protein; l 99.4 2.1E-11 7E-16 136.9 22.4 335 136-547 51-389 (394)
403 3un9_A NLR family member X1; l 99.3 3.9E-14 1.3E-18 156.9 -4.6 161 391-551 71-254 (372)
404 2ifg_A High affinity nerve gro 99.3 3.5E-12 1.2E-16 140.7 9.4 89 436-525 27-116 (347)
405 2ifg_A High affinity nerve gro 99.3 2.4E-12 8.4E-17 141.9 7.2 132 443-577 11-146 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 4.1E-11 1.4E-15 126.4 9.4 136 693-838 17-212 (263)
407 4h09_A Hypothetical leucine ri 99.1 4E-09 1.4E-13 117.6 22.9 127 121-256 43-169 (379)
408 1nd4_A Aminoglycoside 3'-phosp 99.1 2E-10 6.8E-15 121.0 9.0 125 699-838 29-213 (264)
409 3dxp_A Putative acyl-COA dehyd 99.0 3.7E-10 1.3E-14 124.9 10.7 139 696-840 44-249 (359)
410 4h09_A Hypothetical leucine ri 99.0 1.4E-08 4.8E-13 113.1 22.4 131 94-233 40-170 (379)
411 2ra8_A Uncharacterized protein 99.0 5.2E-11 1.8E-15 130.5 0.4 84 219-304 250-341 (362)
412 3rw6_A Nuclear RNA export fact 99.0 7.6E-12 2.6E-16 129.8 -6.2 145 63-212 77-235 (267)
413 2ra8_A Uncharacterized protein 98.9 2.7E-10 9.2E-15 124.8 3.5 85 243-328 250-341 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.9 8.5E-10 2.9E-14 118.9 6.0 185 696-895 26-289 (304)
415 3r70_A Aminoglycoside phosphot 98.6 1.8E-07 6.2E-12 101.3 11.4 132 693-840 40-238 (320)
416 1io0_A Tropomodulin; LRR prote 98.5 4.8E-09 1.6E-13 103.7 -2.7 124 91-234 27-164 (185)
417 3rw6_A Nuclear RNA export fact 98.5 1.7E-08 5.7E-13 104.7 -0.3 79 462-542 168-257 (267)
418 1io0_A Tropomodulin; LRR prote 98.4 2.2E-08 7.7E-13 98.8 -0.0 93 409-501 29-136 (185)
419 3tdw_A Gentamicin resistance p 98.3 2.4E-06 8.3E-11 91.6 12.4 133 696-840 25-225 (306)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 2.8E-06 9.6E-11 89.5 12.8 131 698-839 32-223 (272)
421 3d1u_A Putative fructosamine-3 98.2 3.2E-06 1.1E-10 89.6 10.7 75 695-774 20-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 3.5E-06 1.2E-10 92.5 9.1 138 696-840 47-244 (362)
423 3ats_A Putative uncharacterize 98.1 2.7E-06 9.2E-11 93.6 6.4 81 696-776 26-122 (357)
424 2olc_A MTR kinase, methylthior 97.9 1.6E-05 5.5E-10 88.8 9.5 75 696-772 36-120 (397)
425 2q83_A YTAA protein; 2635576, 97.9 2.9E-05 9.9E-10 84.7 10.6 137 697-839 39-252 (346)
426 3e4g_A ATP synthase subunit S, 97.8 6E-06 2.1E-10 79.1 1.7 84 440-523 61-150 (176)
427 3e4g_A ATP synthase subunit S, 97.7 7.1E-06 2.4E-10 78.6 1.2 82 465-546 62-149 (176)
428 3jr1_A Putative fructosamine-3 97.6 0.00028 9.7E-09 75.1 11.3 134 696-835 42-232 (312)
429 2pyw_A Uncharacterized protein 97.5 0.0002 7E-09 80.3 9.9 81 807-889 230-312 (420)
430 3f7w_A Putative fructosamine-3 97.3 0.00072 2.5E-08 71.5 10.9 75 695-774 20-97 (288)
431 1pgv_A TMD-1, tropomodulin TMD 97.3 4.3E-05 1.5E-09 74.7 0.1 63 391-453 40-111 (197)
432 1pgv_A TMD-1, tropomodulin TMD 97.2 5.7E-05 1.9E-09 73.8 0.4 87 412-498 37-136 (197)
433 1zyl_A Hypothetical protein YI 97.1 0.0025 8.6E-08 68.6 12.6 139 697-840 33-224 (328)
434 2ppq_A HSK, HK, homoserine kin 97.1 0.00078 2.7E-08 72.5 8.5 140 696-839 28-217 (322)
435 3csv_A Aminoglycoside phosphot 97.1 0.00079 2.7E-08 72.9 8.4 138 697-840 25-218 (333)
436 3dxq_A Choline/ethanolamine ki 97.1 0.00053 1.8E-08 73.1 6.5 71 695-774 23-95 (301)
437 3feg_A Choline/ethanolamine ki 97.0 0.0013 4.4E-08 72.0 8.6 137 697-839 57-254 (379)
438 3rfe_A Platelet glycoprotein I 96.9 0.0012 4.2E-08 60.2 6.4 37 125-162 32-68 (130)
439 1nw1_A Choline kinase (49.2 KD 96.8 0.0023 7.9E-08 71.6 8.9 71 697-774 80-159 (429)
440 3rfe_A Platelet glycoprotein I 96.8 0.0015 5.1E-08 59.6 5.7 37 489-525 32-68 (130)
441 3i1a_A Spectinomycin phosphotr 96.6 0.0055 1.9E-07 66.3 9.4 68 699-774 32-108 (339)
442 3c5i_A Choline kinase; choline 96.5 0.0032 1.1E-07 69.1 6.8 72 697-774 40-121 (369)
443 2qg7_A Ethanolamine kinase PV0 95.9 0.018 6.3E-07 64.6 9.3 73 696-774 114-188 (458)
444 3f2s_A CK, chetk-alpha, cholin 95.4 0.027 9.3E-07 61.7 8.2 139 697-839 59-280 (401)
445 3mes_A Choline kinase; malaria 94.9 0.029 1E-06 62.1 6.5 72 697-774 77-157 (424)
446 2yle_A Protein spire homolog 1 92.0 0.47 1.6E-05 46.4 8.6 102 772-892 33-135 (229)
447 3g15_A CK, chetk-alpha, cholin 89.6 0.75 2.6E-05 50.6 8.7 29 811-839 246-280 (401)
448 4ann_A ESSB; membrane protein, 86.6 1.6 5.5E-05 42.7 7.7 117 745-895 43-159 (215)
449 4ano_A ESSB; membrane protein, 84.3 2.7 9.1E-05 41.3 8.1 116 745-895 48-164 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 80.7 0.31 1.1E-05 54.7 -0.2 62 694-758 146-215 (463)
451 2klu_A T-cell surface glycopro 67.3 8.6 0.00029 28.9 4.6 29 619-647 12-40 (70)
452 3ls8_A Phosphatidylinositol 3- 54.7 1.1E+02 0.0038 34.8 13.3 84 750-838 402-501 (614)
453 2lz0_A Uncharacterized protein 54.6 19 0.00066 30.2 5.5 43 112-156 8-50 (100)
454 2lz0_A Uncharacterized protein 51.6 37 0.0012 28.5 6.8 45 185-230 8-52 (100)
455 2x6h_A GH13170P, VPS34, phosph 44.3 1.5E+02 0.005 34.5 12.4 83 751-838 477-575 (696)
456 2k1k_A Ephrin type-A receptor 42.1 28 0.00097 23.3 3.5 6 620-625 13-18 (38)
457 3hhm_A Phosphatidylinositol-4, 39.8 1.5E+02 0.0051 36.3 11.9 42 793-838 918-961 (1091)
458 2jwa_A Receptor tyrosine-prote 36.9 23 0.00079 24.6 2.5 7 634-640 32-38 (44)
459 2l2t_A Receptor tyrosine-prote 33.6 1.1E+02 0.0036 21.3 5.4 13 632-644 29-41 (44)
460 1e7u_A Phosphatidylinositol 3- 33.4 91 0.0031 37.7 8.7 25 814-838 804-828 (961)
461 2k1k_A Ephrin type-A receptor 24.7 1.6E+02 0.0055 19.7 5.0 7 619-625 16-22 (38)
462 3ox7_P MH027; urokinase-type p 24.1 24 0.00083 19.6 0.7 8 63-70 7-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.9e-77 Score=735.45 Aligned_cols=544 Identities=33% Similarity=0.566 Sum_probs=448.8
Q ss_pred CChhHHHHHHHHHHhccCCCCCCCCCCCCCCCCccceeEEecCCCCceEEeccCCCCCCcc---cc--------------
Q 002321 31 SLNDDVLGLIVFKADIQDPNGKLSSWSEDDDTPCNWFGVKCSPRSNRVIELTLNGLSLTGR---IG-------------- 93 (936)
Q Consensus 31 ~~~~~~~aLl~~k~~~~d~~~~l~sW~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~---~~-------------- 93 (936)
+.++|++||++||+++.||. .+++|+.+++ ||.|.||+|+ +++|+.|+|+++++.|. +|
T Consensus 9 ~~~~~~~all~~k~~~~~~~-~l~~W~~~~~-~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKN-LLPDWSSNKN-PCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTT-SSTTCCTTSC-GGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred CCHHHHHHHHHHHhhCCCcc-cccCCCCCCC-CcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 45789999999999999998 8999986655 9999999999 59999999999999887 44
Q ss_pred ---------cccccCccccEEeccCCcccCcCCC--chhhcCCCcEEEccCcccccccchhhh-----------------
Q 002321 94 ---------RGLLQLQFLRKLSLSSNNLTGSISP--NLAKLQNLRVIDLSGNSLSGSIPDEFF----------------- 145 (936)
Q Consensus 94 ---------~~l~~l~~L~~L~L~~n~l~~~~~~--~l~~l~~L~~L~Ls~N~l~~~i~~~~f----------------- 145 (936)
+.++++++|++|+|++|+++|.+|. .++++++|++|||++|++++.+|...+
T Consensus 85 ~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred cCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 4677888999999999999988887 888888888888888887766665432
Q ss_pred --------------------------------hcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCC
Q 002321 146 --------------------------------KQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGI 193 (936)
Q Consensus 146 --------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 193 (936)
..+++|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|..+
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l 243 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI 243 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHT
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHH
Confidence 2344555555556666655555 7778888888888888887777777
Q ss_pred CCCCCCCEEecCCCCCC----------------------CCCccCccCC-CCcceeecccccccccCCcccccccCccee
Q 002321 194 WGLSALRTLDLSDNLLE----------------------GEIPKGVESL-KNLRVINLSKNMFSGSIPDGIGSCSLLRTI 250 (936)
Q Consensus 194 ~~l~~L~~L~L~~N~l~----------------------~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 250 (936)
.++++|++|+|++|.++ +.+|..+..+ ++|++|+|++|++++.+|..|+.+++|++|
T Consensus 244 ~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 323 (768)
T 3rgz_A 244 STCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESL 323 (768)
T ss_dssp TTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEE
T ss_pred hcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEE
Confidence 77766666666666554 3556666554 888888888888888888888888888888
Q ss_pred eccccccCCCCchh-hhccccccEEeccCccccCCCCcccccCC---------------------------ccceecccC
Q 002321 251 DFSENSFSGNLPET-MQKLSLCNFMNLRKNLFSGEVPKWIGELE---------------------------SLETLDLSG 302 (936)
Q Consensus 251 ~Ls~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~l~---------------------------~L~~L~L~~ 302 (936)
+|++|++++.+|.. +..+++|+.|+|++|.+++.+|..+..++ +|++|++++
T Consensus 324 ~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~ 403 (768)
T 3rgz_A 324 ALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403 (768)
T ss_dssp ECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCS
T ss_pred ECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCC
Confidence 88888888777755 77788888888888887777776665544 455555555
Q ss_pred ceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhc-cCCccccccccccccCCC
Q 002321 303 NKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFS-SGLNKVSFAENKIREGMN 381 (936)
Q Consensus 303 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~n~l~~~~~ 381 (936)
|++++.+|..+.++++|++|+|++|++++.+|..+..+++|+.|++++|.+.+.+|..+.. ..++.|++.+|.+..
T Consensus 404 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--- 480 (768)
T 3rgz_A 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG--- 480 (768)
T ss_dssp SEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS---
T ss_pred CccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccC---
Confidence 5555566666777777777777777777777777777777777777777777777765543 577888888887763
Q ss_pred CCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCC--
Q 002321 382 GPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPE-- 459 (936)
Q Consensus 382 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-- 459 (936)
.+|..+..+++|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..++.+++|++|+|++|+++|.+|..
T Consensus 481 -~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~ 559 (768)
T 3rgz_A 481 -EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559 (768)
T ss_dssp -CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGG
T ss_pred -cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHh
Confidence 45566778899999999999999999999999999999999999999999999999999999999999988776643
Q ss_pred --------------------------------------------------------------------CCCcCCCcEEEe
Q 002321 460 --------------------------------------------------------------------IGGAYSLKELRL 471 (936)
Q Consensus 460 --------------------------------------------------------------------~~~l~~L~~L~L 471 (936)
++.+++|+.|+|
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdL 639 (768)
T 3rgz_A 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 639 (768)
T ss_dssp TTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEEC
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEEC
Confidence 344678999999
Q ss_pred cCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCccccc
Q 002321 472 ERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGE 551 (936)
Q Consensus 472 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 551 (936)
++|+++|.+|.+++++++|+.|+|++|+++|.+|..++++++|++|||++|+++|.+|..+.++++|++|||++|+++|.
T Consensus 640 s~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ 719 (768)
T 3rgz_A 640 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 719 (768)
T ss_dssp CSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEE
T ss_pred cCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcCCCccccCCCCCCCCCCCCCCCCC
Q 002321 552 LPAGGFFNTISPSSVLGNPSLCGSAVNKSCPAV 584 (936)
Q Consensus 552 ~p~~~~~~~~~~~~~~gn~~~c~~~~~~~~~~~ 584 (936)
||.+++|.+++..+|.|||++||.|+. .|...
T Consensus 720 iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 720 IPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred CCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999999999999999999999999986 78544
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-60 Score=570.51 Aligned_cols=482 Identities=20% Similarity=0.264 Sum_probs=353.5
Q ss_pred hhHHHHHHHHHHhccCC-CC-------CCCCCCCCCCCCccc---eeEEecCCCCceEEeccCCCCCCcccccccccCcc
Q 002321 33 NDDVLGLIVFKADIQDP-NG-------KLSSWSEDDDTPCNW---FGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQF 101 (936)
Q Consensus 33 ~~~~~aLl~~k~~~~d~-~~-------~l~sW~~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~ 101 (936)
..|++||.+|++++.++ .. ...+|+.+.+ ||.| .||+|+.. +||++|+|++++++|.+|+++++|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~-~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKE-LDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSC-GGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCC-cccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 46999999999998755 22 2348998766 9999 99999876 99999999999999999999999999
Q ss_pred ccEEeccCCcc------cC------cCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEcc------------
Q 002321 102 LRKLSLSSNNL------TG------SISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLA------------ 157 (936)
Q Consensus 102 L~~L~L~~n~l------~~------~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~------------ 157 (936)
|++|+|++|++ .+ .+|... +.+|+ +++++|.+.+.+|..+...+.++..+++.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred ceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 99999999987 33 344444 66778 89999998887776554333333333333
Q ss_pred --------CccCCCCCCCCccccccccccccccccccCC-----------------CCCCCC--CCCCCCEEecCCCCCC
Q 002321 158 --------KNRFSGKIPSSLSLCSTLATINLSSNRFSSP-----------------LPLGIW--GLSALRTLDLSDNLLE 210 (936)
Q Consensus 158 --------~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~ 210 (936)
+|++++ +|..|+++++|++|+|++|+|++. +|..++ ++++|++|+|++|++.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 456666 666666666666666666666664 666666 6666666666666666
Q ss_pred CCCccCccCCCCcceeeccccc-ccc-cCCcccccc------cCcceeeccccccCCCCch--hhhccccccEEeccCcc
Q 002321 211 GEIPKGVESLKNLRVINLSKNM-FSG-SIPDGIGSC------SLLRTIDFSENSFSGNLPE--TMQKLSLCNFMNLRKNL 280 (936)
Q Consensus 211 ~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~~~~--~l~~l~~L~~L~L~~N~ 280 (936)
+.+|..|.++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .+..+++|+.|+|++|.
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 6666666666666666666666 665 566666554 66666666666666 5555 66666666666666666
Q ss_pred ccCCCCcccccCCccceecccCceeccccCcccccccc-cceEEccCCcccccCChhhhccC--CCCEEEccCCcCccCC
Q 002321 281 FSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQR-LKVLNFSANRLTGSLPDSMANCM--NLVALDFSQNSMNGDL 357 (936)
Q Consensus 281 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~ 357 (936)
++|.+| .++.+++|++|+|++|+++ .+|..+.++++ |++|++++|+++ .+|..+..+. +|+.|++++|.+.+.+
T Consensus 342 l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~ 418 (636)
T 4eco_A 342 LEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVD 418 (636)
T ss_dssp CEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTT
T ss_pred Cccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcc
Confidence 666666 6666666666666666666 55666666666 666666666666 5555555443 6666666666666555
Q ss_pred ChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCc-cc
Q 002321 358 PQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPV-AI 436 (936)
Q Consensus 358 p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~ 436 (936)
|..+.. .......+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|. .+
T Consensus 419 p~~l~~--------------------~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~ 477 (636)
T 4eco_A 419 GKNFDP--------------------LDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSL 477 (636)
T ss_dssp TCSSCT--------------------TCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSS
T ss_pred hhhhcc--------------------cccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHh
Confidence 433210 0011114668999999999998666666777899999999999998 4554 33
Q ss_pred cCc-------ccCCeeecCCccccccCCCCCC--CcCCCcEEEecCCccCCcCccccccccccccccc------cCcccc
Q 002321 437 GDL-------KALNVLDLSENWLNGSIPPEIG--GAYSLKELRLERNFLAGKIPTSIENCSSLVSLIL------SKNNLT 501 (936)
Q Consensus 437 ~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L------~~N~l~ 501 (936)
... ++|++|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|++|+| ++|++.
T Consensus 478 ~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~ 555 (636)
T 4eco_A 478 KDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTL 555 (636)
T ss_dssp EETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCC
T ss_pred ccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCccc
Confidence 333 38999999999998 6787776 89999999999999996 8999999999999999 567888
Q ss_pred CCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccc
Q 002321 502 GPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQG 550 (936)
Q Consensus 502 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 550 (936)
+.+|..+..+++|++|+|++|+| +.+|..+. ++|+.|+|++|++..
T Consensus 556 ~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 556 REWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred ccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 89999999999999999999999 58888766 799999999998875
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.5e-59 Score=571.61 Aligned_cols=466 Identities=33% Similarity=0.500 Sum_probs=413.4
Q ss_pred CceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEE
Q 002321 76 NRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVIS 155 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~ 155 (936)
..++.|+|+++.+++.+|. ++++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|.. .+++|++|+
T Consensus 200 ~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L~ 275 (768)
T 3rgz_A 200 VNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLS 275 (768)
T ss_dssp TTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC---CCTTCCEEE
T ss_pred CcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc---ccCCCCEEE
Confidence 5677888888888887776 888888888888888888888888888888888888888888777753 788888888
Q ss_pred ccCccCCCCCCCCcccc-ccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccC-ccCCCCcceeecccccc
Q 002321 156 LAKNRFSGKIPSSLSLC-STLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKG-VESLKNLRVINLSKNMF 233 (936)
Q Consensus 156 L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l 233 (936)
|++|++++.+|..+... ++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|.. +.++++|++|+|++|++
T Consensus 276 L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l 355 (768)
T 3rgz_A 276 LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355 (768)
T ss_dssp CCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEE
T ss_pred CcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCcc
Confidence 88888888888888765 88999999999998888888889999999999999988777765 88889999999999999
Q ss_pred cccCCccccccc-CcceeeccccccCCCCchhhhc--cccccEEeccCccccCCCCcccccCCccceecccCceeccccC
Q 002321 234 SGSIPDGIGSCS-LLRTIDFSENSFSGNLPETMQK--LSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVP 310 (936)
Q Consensus 234 ~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~~l~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 310 (936)
++.+|..+..++ +|++|++++|++++.+|..+.. +++|+.|++++|.+++.+|..++.+++|++|+|++|++++.+|
T Consensus 356 ~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 435 (768)
T 3rgz_A 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435 (768)
T ss_dssp EECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCC
T ss_pred CccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCccc
Confidence 888888888887 8999999999988888887776 7889999999999999999999999999999999999999999
Q ss_pred cccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhc-cCCccccccccccccCCCCCCCCCCC
Q 002321 311 ISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFS-SGLNKVSFAENKIREGMNGPFASSGS 389 (936)
Q Consensus 311 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~l~~n~l~~~~~~~~~~~~~ 389 (936)
..+.++++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+.. ..++.|++.+|++.. .+|..++
T Consensus 436 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~----~~p~~~~ 511 (768)
T 3rgz_A 436 SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG----EIPKWIG 511 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS----CCCGGGG
T ss_pred HHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCC----cCChHHh
Confidence 99999999999999999999999999999999999999999999988876654 689999999999863 4566677
Q ss_pred CCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccc---------------------------------
Q 002321 390 SFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAI--------------------------------- 436 (936)
Q Consensus 390 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~--------------------------------- 436 (936)
.+++|++|+|++|++++.+|..++.+++|++|+|++|+++|.+|..+
T Consensus 512 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (768)
T 3rgz_A 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAG 591 (768)
T ss_dssp GCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSE
T ss_pred cCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccc
Confidence 89999999999999999999999999999999999999987777543
Q ss_pred -------------------------------------cCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCc
Q 002321 437 -------------------------------------GDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGK 479 (936)
Q Consensus 437 -------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 479 (936)
+.+++|++|||++|+++|.+|..++.+++|+.|+|++|+++|.
T Consensus 592 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ 671 (768)
T 3rgz_A 592 NLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGS 671 (768)
T ss_dssp EEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSC
T ss_pred cccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCC
Confidence 3457899999999999999999999999999999999999999
Q ss_pred CccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCc-ccc
Q 002321 480 IPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNH-LQG 550 (936)
Q Consensus 480 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~-l~~ 550 (936)
+|..|+++++|++|+|++|+++|.+|..+..+++|++|||++|+|+|.+|.. ..+..+....+.+|+ |+|
T Consensus 672 ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 672 IPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEES
T ss_pred CChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcC
Confidence 9999999999999999999999999999999999999999999999999964 556667777788886 565
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.2e-58 Score=557.54 Aligned_cols=473 Identities=19% Similarity=0.265 Sum_probs=368.7
Q ss_pred ChhHHHHHHHHHHhccCCCCCCCCCCCCC----CCC--ccc------------eeEEecCCCCceEEeccCCCCCCcccc
Q 002321 32 LNDDVLGLIVFKADIQDPNGKLSSWSEDD----DTP--CNW------------FGVKCSPRSNRVIELTLNGLSLTGRIG 93 (936)
Q Consensus 32 ~~~~~~aLl~~k~~~~d~~~~l~sW~~~~----~~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~g~~~ 93 (936)
..+|++||++||+++.|| +|+.++ .+| |.| .||+|+. .+||++|+|++++++|.+|
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEEC
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCc
Confidence 357999999999999887 787654 234 999 9999987 4999999999999999999
Q ss_pred cccccCccccEEec-cCCcccCcCCCch---------------------------------------------------h
Q 002321 94 RGLLQLQFLRKLSL-SSNNLTGSISPNL---------------------------------------------------A 121 (936)
Q Consensus 94 ~~l~~l~~L~~L~L-~~n~l~~~~~~~l---------------------------------------------------~ 121 (936)
++|++|++|++|+| ++|.++|..|... .
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 8898877633221 1
Q ss_pred hcCCCcEEEccC--cccccccchhhhhcCCCCcEEEccCccCCC-----------------CCCCCcc--cccccccccc
Q 002321 122 KLQNLRVIDLSG--NSLSGSIPDEFFKQCGSLRVISLAKNRFSG-----------------KIPSSLS--LCSTLATINL 180 (936)
Q Consensus 122 ~l~~L~~L~Ls~--N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~L 180 (936)
....++.+.++. |+++| ||.. |.++++|++|+|++|+|++ .+|..++ ++++|++|+|
T Consensus 421 ~~l~l~~l~l~~~~N~L~~-IP~~-l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITF-ISKA-IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEE-ECGG-GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccchhhceeccccCcccc-hhHH-HhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 112344444443 88987 8864 7899999999999999998 3888887 9999999999
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCC-CCC-CCccCccCCC-------CcceeecccccccccCCc--ccccccCcce
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNL-LEG-EIPKGVESLK-------NLRVINLSKNMFSGSIPD--GIGSCSLLRT 249 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~~L~~ 249 (936)
++|++.+.+|..|.++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .|+.+++|++
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 9999999999999999999999999998 887 7887666665 9999999999999 7888 8999999999
Q ss_pred eeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCc-cceecccCceeccccCcccccccc--cceEEccC
Q 002321 250 IDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELES-LETLDLSGNKFSGAVPISIGNLQR--LKVLNFSA 326 (936)
Q Consensus 250 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~l~~l~~--L~~L~L~~ 326 (936)
|+|++|+++ .+| .|..+++|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .+|..+..+.. |+.|+|++
T Consensus 578 L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 578 LDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 999999999 777 8999999999999999999 88888999998 999999999998 77887777654 99999999
Q ss_pred CcccccCChhh---h--ccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccC
Q 002321 327 NRLTGSLPDSM---A--NCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSH 401 (936)
Q Consensus 327 N~l~~~~~~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~ 401 (936)
|++++.+|... . .+.+|+.|+|++|.+. .+|..++ ..+++|+.|+|++
T Consensus 654 N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~--------------------------~~l~~L~~L~Ls~ 706 (876)
T 4ecn_A 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELF--------------------------ATGSPISTIILSN 706 (876)
T ss_dssp SCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHH--------------------------HTTCCCSEEECCS
T ss_pred CcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHH--------------------------ccCCCCCEEECCC
Confidence 99998766432 2 3458999999999998 5665543 1356788888888
Q ss_pred cccCCCChhhhcc-------cccCCeeeccCccccCCCCcccc--CcccCCeeecCCccccccCCCCCCCcCCCcEEEec
Q 002321 402 NEFSGETPATIGA-------LSGLQLLNLSRNSLVGPIPVAIG--DLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLE 472 (936)
Q Consensus 402 N~l~~~~~~~~~~-------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 472 (936)
|+|+...+..+.. +++|++|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|+
T Consensus 707 N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls 784 (876)
T 4ecn_A 707 NLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIR 784 (876)
T ss_dssp CCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECC
T ss_pred CcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECC
Confidence 8887333333332 337888888888888 6777776 88888888888888886 67778888888888887
Q ss_pred C------CccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCC
Q 002321 473 R------NFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHN 546 (936)
Q Consensus 473 ~------N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 546 (936)
+ |++.+.+|..|.++++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+..+.....+..+.|++|
T Consensus 785 ~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n 861 (876)
T 4ecn_A 785 HQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYD 861 (876)
T ss_dssp CCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECC
T ss_pred CCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCC
Confidence 7 555555555555566666666666655 35555543 35556666666555444444444444455555555
Q ss_pred ccc
Q 002321 547 HLQ 549 (936)
Q Consensus 547 ~l~ 549 (936)
+++
T Consensus 862 ~~~ 864 (876)
T 4ecn_A 862 KTQ 864 (876)
T ss_dssp TTS
T ss_pred Ccc
Confidence 443
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.6e-56 Score=543.05 Aligned_cols=510 Identities=23% Similarity=0.237 Sum_probs=382.8
Q ss_pred CccceeEEecCC---------CCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccC
Q 002321 63 PCNWFGVKCSPR---------SNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSG 133 (936)
Q Consensus 63 ~c~w~gv~c~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 133 (936)
.|.+.-|.|+.. +.+++.|+|+++++++..+..+.++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 456666777641 35899999999999987777899999999999999999999999999999999999999
Q ss_pred cccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCC
Q 002321 134 NSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEI 213 (936)
Q Consensus 134 N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 213 (936)
|+++ .+|...|.++++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..+.++++|++|+|++|.+++..
T Consensus 83 n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 83 NELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 9999 789889999999999999999999888899999999999999999999999999999999999999999999877
Q ss_pred ccCcc--CCCCcceeecccccccccCCcccccc---------------------------cCcceeeccccccCCCCchh
Q 002321 214 PKGVE--SLKNLRVINLSKNMFSGSIPDGIGSC---------------------------SLLRTIDFSENSFSGNLPET 264 (936)
Q Consensus 214 ~~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l---------------------------~~L~~L~Ls~N~l~~~~~~~ 264 (936)
+..+. .+++|++|++++|++++..|..|..+ ++|++|++++|.+++..|..
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 76554 45889999999999988777666543 44566667777777666777
Q ss_pred hhcccc--ccEEeccCccccCCCCcccccCCccceecccCceeccccCcccc----------------------------
Q 002321 265 MQKLSL--CNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIG---------------------------- 314 (936)
Q Consensus 265 l~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~---------------------------- 314 (936)
|..++. |+.|+|++|.+++..|..|+.+++|++|+|++|++++..|..+.
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 776654 77777777777777677777777777777777777666555444
Q ss_pred -----cccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccC-CChhhhc----cCCccccccccccccCCCCCC
Q 002321 315 -----NLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGD-LPQWIFS----SGLNKVSFAENKIREGMNGPF 384 (936)
Q Consensus 315 -----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~----~~l~~l~l~~n~l~~~~~~~~ 384 (936)
.+++|++|++++|++++..+..|..+++|+.|++++|.+... ++...+. ..++.+++.+|++.....
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~--- 398 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIES--- 398 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECT---
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeECh---
Confidence 445555555556666655555666666666666666554321 1111111 345556666666554332
Q ss_pred CCCCCCCCcccEEeccCcccCCCCh-hhhcccccCCeeeccCcccc--------------------------CCCCcccc
Q 002321 385 ASSGSSFESLQFLDLSHNEFSGETP-ATIGALSGLQLLNLSRNSLV--------------------------GPIPVAIG 437 (936)
Q Consensus 385 ~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~--------------------------~~~~~~~~ 437 (936)
..+..+++|++|+|++|.+++.++ ..|.++++|++|+|++|++. +.+|..|+
T Consensus 399 -~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~ 477 (680)
T 1ziw_A 399 -DAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477 (680)
T ss_dssp -TTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT
T ss_pred -hhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc
Confidence 233456666666666666654333 45556666666666666554 34566677
Q ss_pred CcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCc--------cccccccccccccccCccccCCCccccc
Q 002321 438 DLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIP--------TSIENCSSLVSLILSKNNLTGPIPIAIA 509 (936)
Q Consensus 438 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 509 (936)
.+++|++|+|++|++++..+..+.++++|++|+|++|++++..+ ..|.++++|++|+|++|+++...+..|.
T Consensus 478 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 77788888888888877666677888888888888888775321 2367788888888888888855455688
Q ss_pred ccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCC-C-ccCcCCCccccCCCCCCCCCC
Q 002321 510 KLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAG-G-FFNTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 510 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~-~-~~~~~~~~~~~gn~~~c~~~~ 577 (936)
.+++|++|||++|+|++..+..+..+++|+.|+|++|++++..|.. + .+..+....+.||||.|+|+.
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 8888999999999888655566788889999999999888765542 1 467778888899999999874
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.4e-57 Score=539.90 Aligned_cols=506 Identities=22% Similarity=0.229 Sum_probs=441.1
Q ss_pred ceeEEecCC---------CCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCccc
Q 002321 66 WFGVKCSPR---------SNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSL 136 (936)
Q Consensus 66 w~gv~c~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l 136 (936)
+.-|.|... +..++.|+|+++.+++..|..|.++++|++|+|++|+++++.|.+|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 556888642 35789999999999988888899999999999999999988899999999999999999999
Q ss_pred ccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccC
Q 002321 137 SGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKG 216 (936)
Q Consensus 137 ~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 216 (936)
+ .+++..|.++++|++|+|++|+|++..+..++.+++|++|+|++|++++.....+.++++|++|+|++|.+++..|..
T Consensus 94 ~-~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 I-FMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp S-EECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred c-ccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 8 566677899999999999999999877888999999999999999999866566667999999999999999888888
Q ss_pred ccCCCCcc--eeecccccccccCCcccccccCcceeecccccc--------------------------CCCCchhhhcc
Q 002321 217 VESLKNLR--VINLSKNMFSGSIPDGIGSCSLLRTIDFSENSF--------------------------SGNLPETMQKL 268 (936)
Q Consensus 217 ~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l--------------------------~~~~~~~l~~l 268 (936)
+..+++|+ .|++++|++++..|..|.. .+|++|++++|.. ....+..+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999999 8999999999887776654 6788888887751 11223334444
Q ss_pred c--cccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEE
Q 002321 269 S--LCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVAL 346 (936)
Q Consensus 269 ~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 346 (936)
. .++.|++++|.+++..+..|..+++|++|++++|+++ .+|..+.++++|++|++++|++++..|..+..+++|+.|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 3 7889999999999888888999999999999999998 778889999999999999999998888899999999999
Q ss_pred EccCCcCccCCChhhhc--cCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeecc
Q 002321 347 DFSQNSMNGDLPQWIFS--SGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLS 424 (936)
Q Consensus 347 ~Ls~N~l~~~~p~~~~~--~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 424 (936)
++++|.+.+.+|...+. ..++.|++.+|.+..... .+..+..+++|++|++++|++.+..+..|..+++|++|+|+
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 408 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDC--CNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLA 408 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEE--STTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECT
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccC--cchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECC
Confidence 99999998877765433 689999999999876431 23455778999999999999998999999999999999999
Q ss_pred CccccCCCCc-cccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCc---CccccccccccccccccCccc
Q 002321 425 RNSLVGPIPV-AIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGK---IPTSIENCSSLVSLILSKNNL 500 (936)
Q Consensus 425 ~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~~L~L~~N~l 500 (936)
+|++++..+. .+..+++|++|++++|.+++..|..+.++++|++|+|++|++++. .+..+..+++|++|+|++|++
T Consensus 409 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l 488 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488 (606)
T ss_dssp TCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCC
T ss_pred CCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCcc
Confidence 9999977655 489999999999999999988899999999999999999999863 346799999999999999999
Q ss_pred cCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCC-CccCcCCCccccCCCCCCCCCC
Q 002321 501 TGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAG-GFFNTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 501 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~gn~~~c~~~~ 577 (936)
++..|..|..+++|++|+|++|++++..|..+.++++| .|++++|++++.+|.. ..+..+....+.|||+.|+++.
T Consensus 489 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred CccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 99889999999999999999999999999999999999 9999999999877652 4566778888999999998765
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-55 Score=547.16 Aligned_cols=494 Identities=22% Similarity=0.232 Sum_probs=425.9
Q ss_pred ccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcC-CCchhhcCCCcEEEccCcccccccch
Q 002321 64 CNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSI-SPNLAKLQNLRVIDLSGNSLSGSIPD 142 (936)
Q Consensus 64 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~Ls~N~l~~~i~~ 142 (936)
|+|..|-+ -+.+++.|+|++|.+++..+..+.++++|++|+|++|++.+.+ |.+|.++++|++|+|++|+|+ .+++
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~-~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIY-FLHP 90 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCC-EECT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCc-ccCH
Confidence 46777776 4578999999999999888899999999999999999776666 788999999999999999999 5666
Q ss_pred hhhhcCCCCcEEEccCccCCCCCCCC--ccccccccccccccccccCCCC-CCCCCCCCCCEEecCCCCCCCCCccCccC
Q 002321 143 EFFKQCGSLRVISLAKNRFSGKIPSS--LSLCSTLATINLSSNRFSSPLP-LGIWGLSALRTLDLSDNLLEGEIPKGVES 219 (936)
Q Consensus 143 ~~f~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 219 (936)
..|.++++|++|+|++|.+++.+|.. |+.+++|++|+|++|++++..+ ..|.++++|++|+|++|.+++..+..+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 77899999999999999999877665 9999999999999999998765 57999999999999999999999999988
Q ss_pred C--CCcceeecccccccccCCcccccccC------cceeeccccccCCCCchhhhcc-----------------------
Q 002321 220 L--KNLRVINLSKNMFSGSIPDGIGSCSL------LRTIDFSENSFSGNLPETMQKL----------------------- 268 (936)
Q Consensus 220 l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~~~~~l~~l----------------------- 268 (936)
+ ++|+.|+|++|.+++..|..++.+.+ |++|++++|.+++..+..+...
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 8 89999999999999988888777766 9999999998887666554321
Q ss_pred ---------------ccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccC
Q 002321 269 ---------------SLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSL 333 (936)
Q Consensus 269 ---------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 333 (936)
++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 57899999999999888889999999999999999999888888999999999999999999888
Q ss_pred ChhhhccCCCCEEEccCCcCccCCChhhh-ccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhh
Q 002321 334 PDSMANCMNLVALDFSQNSMNGDLPQWIF-SSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATI 412 (936)
Q Consensus 334 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 412 (936)
+..|..+++|+.|++++|.+.+..+..+. ...|+.|++.+|.++.+. .+++|+.|++++|+++. +|..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~---------~~~~L~~L~l~~N~l~~-l~~~- 399 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH---------FIPSIPDIFLSGNKLVT-LPKI- 399 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS---------SCCSCSEEEEESCCCCC-CCCC-
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc---------CCCCcchhccCCCCccc-cccc-
Confidence 89999999999999999999755554332 368899999999887533 26789999999999973 3432
Q ss_pred cccccCCeeeccCccccCCC-CccccCcccCCeeecCCccccccCCC-CCCCcCCCcEEEecCCccC-----CcCccccc
Q 002321 413 GALSGLQLLNLSRNSLVGPI-PVAIGDLKALNVLDLSENWLNGSIPP-EIGGAYSLKELRLERNFLA-----GKIPTSIE 485 (936)
Q Consensus 413 ~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~l~ 485 (936)
..+++.|++++|++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.
T Consensus 400 --~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 477 (844)
T 3j0a_A 400 --NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFE 477 (844)
T ss_dssp --CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSS
T ss_pred --ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhc
Confidence 467899999999998643 23456899999999999999965443 4667899999999999997 45567799
Q ss_pred cccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCCCccCcCCCcc
Q 002321 486 NCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNTISPSS 565 (936)
Q Consensus 486 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~ 565 (936)
++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..+. ++|+.|+|++|++++.+|. .|..+....
T Consensus 478 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~ 553 (844)
T 3j0a_A 478 GLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLSVLD 553 (844)
T ss_dssp CBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCCEEE
T ss_pred CcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcCEEE
Confidence 999999999999999999999999999999999999999976666665 8999999999999998885 467888888
Q ss_pred ccCCCCCCCCCC
Q 002321 566 VLGNPSLCGSAV 577 (936)
Q Consensus 566 ~~gn~~~c~~~~ 577 (936)
+.|||+.|+|++
T Consensus 554 l~~Np~~C~c~~ 565 (844)
T 3j0a_A 554 ITHNKFICECEL 565 (844)
T ss_dssp EEEECCCCSSSC
T ss_pred ecCCCccccccc
Confidence 999999998876
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.2e-55 Score=529.81 Aligned_cols=502 Identities=20% Similarity=0.188 Sum_probs=412.4
Q ss_pred Cccce----eEEecCC---------CCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEE
Q 002321 63 PCNWF----GVKCSPR---------SNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVI 129 (936)
Q Consensus 63 ~c~w~----gv~c~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 129 (936)
||.|. .|.|... +.+++.|+|+++.+++..+..+.++++|++|+|++|+++++.|.+|.++++|++|
T Consensus 6 ~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L 85 (606)
T 3vq2_A 6 PCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNL 85 (606)
T ss_dssp CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEe
Confidence 56653 5778641 3578899999999988777789999999999999999998888899999999999
Q ss_pred EccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccC-CCCCCCCCCCCCCEEecCCCC
Q 002321 130 DLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSS-PLPLGIWGLSALRTLDLSDNL 208 (936)
Q Consensus 130 ~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~ 208 (936)
+|++|+++ .+++..|.++++|++|+|++|++++..+..|+.+++|++|+|++|++++ .+|..|.++++|++|+|++|+
T Consensus 86 ~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 86 ILTGNPIQ-SFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp ECTTCCCC-CCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred ECCCCccc-ccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 99999998 4555678999999999999999998887889999999999999999986 458889999999999999999
Q ss_pred CCCCCccCccCCCCcc----eeecccccccccCCcccccccCcceeeccccccC-CCCchhhhccccccEEec-------
Q 002321 209 LEGEIPKGVESLKNLR----VINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFS-GNLPETMQKLSLCNFMNL------- 276 (936)
Q Consensus 209 l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~~~~l~~l~~L~~L~L------- 276 (936)
+++..+..+..+++|+ +|++++|.+++..+..+... +|++|++++|.++ +..|..+.+++.++.+++
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccccc
Confidence 9988888888777665 79999999987666666555 8999999999886 345566666666666555
Q ss_pred --------------------------cCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCccc
Q 002321 277 --------------------------RKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLT 330 (936)
Q Consensus 277 --------------------------~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 330 (936)
..|.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|.+
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l- 319 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL- 319 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-
Confidence 55666666666 788888999999999887 455 788888999999999998
Q ss_pred ccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChh
Q 002321 331 GSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPA 410 (936)
Q Consensus 331 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 410 (936)
+.+| .+ .+++|+.|++++|+..+.++ ......++.|++.+|.+..... .+..+..+++|++|++++|.+++ +|.
T Consensus 320 ~~lp-~~-~l~~L~~L~l~~n~~~~~~~-~~~l~~L~~L~ls~n~l~~~~~--~~~~~~~~~~L~~L~L~~n~l~~-~~~ 393 (606)
T 3vq2_A 320 KQFP-TL-DLPFLKSLTLTMNKGSISFK-KVALPSLSYLDLSRNALSFSGC--CSYSDLGTNSLRHLDLSFNGAII-MSA 393 (606)
T ss_dssp SSCC-CC-CCSSCCEEEEESCSSCEECC-CCCCTTCCEEECCSSCEEEEEE--CCHHHHCCSCCCEEECCSCSEEE-ECC
T ss_pred cccc-cC-CCCccceeeccCCcCccchh-hccCCCCCEEECcCCccCCCcc--hhhhhccCCcccEeECCCCcccc-chh
Confidence 4677 44 88899999999986655442 2234678888999888875421 23344567889999999999875 557
Q ss_pred hhcccccCCeeeccCccccCCCC-ccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCC-cCcccccccc
Q 002321 411 TIGALSGLQLLNLSRNSLVGPIP-VAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAG-KIPTSIENCS 488 (936)
Q Consensus 411 ~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~ 488 (936)
.+..+++|++|++++|++.+..| ..+..+++|++|++++|.+++..|..+.++++|++|+|++|++++ .+|..++.++
T Consensus 394 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 473 (606)
T 3vq2_A 394 NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTT 473 (606)
T ss_dssp CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT
T ss_pred hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCC
Confidence 88889999999999999988777 688899999999999999998888889999999999999999987 4788899999
Q ss_pred ccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCC-CccC-cCCCccc
Q 002321 489 SLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAG-GFFN-TISPSSV 566 (936)
Q Consensus 489 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~-~~~~-~~~~~~~ 566 (936)
+|++|+|++|++++..|..+..+++|++|+|++|++++.+|..+..+++|++|+|++|+++ .+|.. ..+. .+....+
T Consensus 474 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l 552 (606)
T 3vq2_A 474 NLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNL 552 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEEC
T ss_pred CCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEc
Confidence 9999999999999888888999999999999999999888999999999999999999998 45553 2333 3666778
Q ss_pred cCCCCCCCCCC
Q 002321 567 LGNPSLCGSAV 577 (936)
Q Consensus 567 ~gn~~~c~~~~ 577 (936)
.+||+.|++++
T Consensus 553 ~~N~~~c~c~~ 563 (606)
T 3vq2_A 553 TNNSVACICEH 563 (606)
T ss_dssp CSCCCCCSSTT
T ss_pred cCCCcccCCcc
Confidence 89999998886
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.8e-53 Score=513.53 Aligned_cols=481 Identities=22% Similarity=0.237 Sum_probs=368.2
Q ss_pred CceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEE
Q 002321 76 NRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVIS 155 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~ 155 (936)
.+++.|+|+++.+++..|..++++++|++|+|++|++++..+.+|+++++|++|+|++|+++ .+++..|..+++|++|+
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccC-ccChhHccccCCCCEEE
Confidence 46888889888888888888888999999999999988766667888999999999999887 57777788899999999
Q ss_pred ccCccCCCCCCCCccccccccccccccccccCCCCCCCC--CCCCCCEEecCCCCCCCCCccCcc---------------
Q 002321 156 LAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIW--GLSALRTLDLSDNLLEGEIPKGVE--------------- 218 (936)
Q Consensus 156 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~--------------- 218 (936)
|++|++++..|..++.+++|++|+|++|++++..+..+. .+++|++|+|++|.+++..|..+.
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 999998888888888888888888888888876665443 456777777777777665554443
Q ss_pred ------------------------------------CCCC--cceeecccccccccCCcccccccCcceeeccccccCCC
Q 002321 219 ------------------------------------SLKN--LRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGN 260 (936)
Q Consensus 219 ------------------------------------~l~~--L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (936)
+++. |++|+|++|++++..|..|+.+++|++|+|++|++++.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 3322 55555555555555555555555555555555555554
Q ss_pred CchhhhccccccEEeccCccccC-----CCCc----ccccCCccceecccCceeccccCcccccccccceEE--------
Q 002321 261 LPETMQKLSLCNFMNLRKNLFSG-----EVPK----WIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLN-------- 323 (936)
Q Consensus 261 ~~~~l~~l~~L~~L~L~~N~l~~-----~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~-------- 323 (936)
.|..|..+++|+.|++++|...+ .+|. .|..+++|++|++++|++++..+..|.++++|++|+
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 44444444444444443332221 1111 445566666777777777766666666655555555
Q ss_pred --------------------ccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhc--cCCccccccccccccCCC
Q 002321 324 --------------------FSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFS--SGLNKVSFAENKIREGMN 381 (936)
Q Consensus 324 --------------------L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~l~~l~l~~n~l~~~~~ 381 (936)
+++|++++..|..|..+++|+.|++++|.+.+.+|...+. ..++.+++.+|++.....
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 447 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCT
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeCh
Confidence 4556666667788888999999999999998777754443 678899999998877655
Q ss_pred CCCCCCCCCCCcccEEeccCcccC--CCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCC--
Q 002321 382 GPFASSGSSFESLQFLDLSHNEFS--GETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIP-- 457 (936)
Q Consensus 382 ~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-- 457 (936)
..| ..+++|+.|++++|.++ +..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+
T Consensus 448 ~~~----~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 523 (680)
T 1ziw_A 448 NSF----ALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHA 523 (680)
T ss_dssp TTT----TTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTT
T ss_pred hhh----hcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhh
Confidence 444 56889999999999987 5788999999999999999999998888899999999999999999986422
Q ss_pred ------CCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcc
Q 002321 458 ------PEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQ 531 (936)
Q Consensus 458 ------~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 531 (936)
..+.++++|+.|+|++|+++...+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..|..
T Consensus 524 ~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 603 (680)
T 1ziw_A 524 NPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV 603 (680)
T ss_dssp STTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHH
T ss_pred ccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhH
Confidence 24789999999999999999555567999999999999999999877788899999999999999999877777
Q ss_pred cc-cccccCeeecCCCcccccCCC-CCccCcC
Q 002321 532 LV-NLVHLSSFNISHNHLQGELPA-GGFFNTI 561 (936)
Q Consensus 532 l~-~l~~L~~L~ls~N~l~~~~p~-~~~~~~~ 561 (936)
+. .+++|+.|++++|++.+.++. .++..++
T Consensus 604 ~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~ 635 (680)
T 1ziw_A 604 FGPAFRNLTELDMRFNPFDCTCESIAWFVNWI 635 (680)
T ss_dssp HHHHHTTCSEEECTTCCCCBCCCCCSSEECCS
T ss_pred hcccccccCEEEccCCCcccCCccHHHHHHHH
Confidence 77 799999999999999999886 4444443
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-53 Score=523.97 Aligned_cols=488 Identities=21% Similarity=0.214 Sum_probs=426.7
Q ss_pred CceEEeccCCCCCCccc-ccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccch-hhhhcCCCCcE
Q 002321 76 NRVIELTLNGLSLTGRI-GRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPD-EFFKQCGSLRV 153 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~-~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~-~~f~~l~~L~~ 153 (936)
..+..|+|+++...+.+ |.++.++++|++|+|++|+|++..|..|.++++|++|+|++|++++.+|. .+|..+++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 57889999999888888 56799999999999999999999999999999999999999999976654 46899999999
Q ss_pred EEccCccCCCCCC-CCccccccccccccccccccCCCCCCCCCC--CCCCEEecCCCCCCCCCccCccCCCC------cc
Q 002321 154 ISLAKNRFSGKIP-SSLSLCSTLATINLSSNRFSSPLPLGIWGL--SALRTLDLSDNLLEGEIPKGVESLKN------LR 224 (936)
Q Consensus 154 L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~------L~ 224 (936)
|+|++|++++..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|+|++|.+.+..|..+..+++ |+
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~ 207 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBS
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCcee
Confidence 9999999998765 579999999999999999999999998888 89999999999999988888777766 99
Q ss_pred eeecccccccccCCccccc--------------------------------------ccCcceeeccccccCCCCchhhh
Q 002321 225 VINLSKNMFSGSIPDGIGS--------------------------------------CSLLRTIDFSENSFSGNLPETMQ 266 (936)
Q Consensus 225 ~L~L~~N~l~~~~p~~l~~--------------------------------------l~~L~~L~Ls~N~l~~~~~~~l~ 266 (936)
+|++++|++++..+..+.. .++|++|+|++|.+.+..+..|.
T Consensus 208 ~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~ 287 (844)
T 3j0a_A 208 ILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFE 287 (844)
T ss_dssp EEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSS
T ss_pred EEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhh
Confidence 9999999887766654432 26899999999999999999999
Q ss_pred ccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEE
Q 002321 267 KLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVAL 346 (936)
Q Consensus 267 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 346 (936)
.+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|+.|++++|++++..+..|..+++|+.|
T Consensus 288 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 367 (844)
T 3j0a_A 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL 367 (844)
T ss_dssp SCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEE
T ss_pred cCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEE
Confidence 99999999999999999999999999999999999999998889999999999999999999998888899999999999
Q ss_pred EccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCC-hhhhcccccCCeeeccC
Q 002321 347 DFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGET-PATIGALSGLQLLNLSR 425 (936)
Q Consensus 347 ~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~ 425 (936)
+|++|.+++ ++. ...++.+.+.+|++...+.. ..+++.|++++|++++.. +..+..+++|++|+|++
T Consensus 368 ~Ls~N~l~~-i~~---~~~L~~L~l~~N~l~~l~~~--------~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~ 435 (844)
T 3j0a_A 368 DLRDNALTT-IHF---IPSIPDIFLSGNKLVTLPKI--------NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQ 435 (844)
T ss_dssp EEETCCSCC-CSS---CCSCSEEEEESCCCCCCCCC--------CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEES
T ss_pred ECCCCCCCc-ccC---CCCcchhccCCCCccccccc--------ccccceeecccCccccCchhhhhhcCCccceeeCCC
Confidence 999999984 332 46789999999999865432 457999999999998753 34567899999999999
Q ss_pred ccccCCCCc-cccCcccCCeeecCCcccc-----ccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCcc
Q 002321 426 NSLVGPIPV-AIGDLKALNVLDLSENWLN-----GSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNN 499 (936)
Q Consensus 426 N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 499 (936)
|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 436 N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 515 (844)
T 3j0a_A 436 NRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNR 515 (844)
T ss_dssp CCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCC
T ss_pred CcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCC
Confidence 999865443 4667899999999999997 4455678999999999999999999999999999999999999999
Q ss_pred ccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCCCccCcCCCccccCCCCCCCCCCCC
Q 002321 500 LTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNTISPSSVLGNPSLCGSAVNK 579 (936)
Q Consensus 500 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~~c~~~~~~ 579 (936)
|++..|..+. ++|+.|||++|+|++..|..+ .+|+.|++++|++.+.++...+..++ ..+|..+||.+...
T Consensus 516 l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~~f~~~~----~~~~~~~~~~~~~~ 586 (844)
T 3j0a_A 516 LTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELSTFINWL----NHTNVTIAGPPADI 586 (844)
T ss_dssp CSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCCSHHHHH----HHTTTTTCCCGGGC
T ss_pred CCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccHHHHHHH----HhcCcccccccccC
Confidence 9987777776 899999999999999888765 47899999999999998865544432 23567778877777
Q ss_pred CCCCC
Q 002321 580 SCPAV 584 (936)
Q Consensus 580 ~~~~~ 584 (936)
.|..+
T Consensus 587 ~C~~p 591 (844)
T 3j0a_A 587 YCVYP 591 (844)
T ss_dssp CCSSC
T ss_pred ccCCc
Confidence 77543
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.3e-53 Score=505.21 Aligned_cols=478 Identities=20% Similarity=0.170 Sum_probs=418.9
Q ss_pred CceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEE
Q 002321 76 NRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVIS 155 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~ 155 (936)
.+++.|+|+++.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .++...|..+++|++|+
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~ 135 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLY 135 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEE
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcc-cCCcchhccCCcccEEE
Confidence 57899999999999888999999999999999999999999999999999999999999999 56667789999999999
Q ss_pred ccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCC--EEecCCCCCCCCCccCccCCCCcceeecccccc
Q 002321 156 LAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALR--TLDLSDNLLEGEIPKGVESLKNLRVINLSKNMF 233 (936)
Q Consensus 156 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 233 (936)
|++|++++..+..+..+++|++|+|++|++++..+..|..+++|+ .|++++|.+++..|..+.. .+|++|++++|..
T Consensus 136 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~ 214 (606)
T 3t6q_A 136 LGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQN 214 (606)
T ss_dssp CCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSC
T ss_pred CCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchh
Confidence 999999986555566699999999999999998888999999999 9999999999877776654 6899999888751
Q ss_pred c--------------------------ccCCccccccc--CcceeeccccccCCCCchhhhccccccEEeccCccccCCC
Q 002321 234 S--------------------------GSIPDGIGSCS--LLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEV 285 (936)
Q Consensus 234 ~--------------------------~~~p~~l~~l~--~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 285 (936)
. ...+..|..+. +|++|++++|.+++..+..|..+++|+.|++++|.++ .+
T Consensus 215 ~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~l 293 (606)
T 3t6q_A 215 LLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-EL 293 (606)
T ss_dssp HHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CC
T ss_pred HHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CC
Confidence 0 11122233333 7899999999999888888999999999999999998 67
Q ss_pred CcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCCh-hhhccCCCCEEEccCCcCccCC--Chhh-
Q 002321 286 PKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPD-SMANCMNLVALDFSQNSMNGDL--PQWI- 361 (936)
Q Consensus 286 ~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~- 361 (936)
|..+..+++|++|++++|++++..|..+.++++|++|++++|.+.+.++. .+..+++|+.|++++|.+.+.. +..+
T Consensus 294 p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 373 (606)
T 3t6q_A 294 PSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373 (606)
T ss_dssp CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTT
T ss_pred ChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcc
Confidence 88899999999999999999988888899999999999999999866654 5889999999999999998654 3322
Q ss_pred hccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChh-hhcccccCCeeeccCccccCCCCccccCcc
Q 002321 362 FSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPA-TIGALSGLQLLNLSRNSLVGPIPVAIGDLK 440 (936)
Q Consensus 362 ~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 440 (936)
....++.|++.+|.+.... +..+..+++|++|++++|++++..+. .+..+++|++|++++|.+++..|..++.++
T Consensus 374 ~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 449 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLK----TEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLP 449 (606)
T ss_dssp TCTTCCEEECCSCSCEEEC----TTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCT
T ss_pred cCCCCCEEECCCCcCCcCC----HHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCC
Confidence 3368999999999887654 34456789999999999999877654 489999999999999999999999999999
Q ss_pred cCCeeecCCcccccc---CCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEE
Q 002321 441 ALNVLDLSENWLNGS---IPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNV 517 (936)
Q Consensus 441 ~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 517 (936)
+|++|+|++|++++. .+..+..+++|+.|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++| +|
T Consensus 450 ~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L 528 (606)
T 3t6q_A 450 ALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL 528 (606)
T ss_dssp TCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE
T ss_pred CCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EE
Confidence 999999999999873 33568999999999999999999889999999999999999999999999999999999 99
Q ss_pred EcCCCcccCCCCcccccccccCeeecCCCcccccCCCCCccCcC
Q 002321 518 DLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNTI 561 (936)
Q Consensus 518 ~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~ 561 (936)
+|++|++++..|..+..+++|+.|++++|++.+.++..++..++
T Consensus 529 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w~ 572 (606)
T 3t6q_A 529 NLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEWY 572 (606)
T ss_dssp ECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHHH
T ss_pred ECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHHH
Confidence 99999999888889999999999999999999988865544443
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.5e-52 Score=496.42 Aligned_cols=475 Identities=20% Similarity=0.190 Sum_probs=421.1
Q ss_pred EEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccC
Q 002321 79 IELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAK 158 (936)
Q Consensus 79 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~ 158 (936)
..++.++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++ .+++..|.++++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~i~~~~~~~l~~L~~L~Ls~ 89 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIE-TIEDKAWHGLHHLSNLILTG 89 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTT
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCccc-ccCHHHhhchhhcCEeECCC
Confidence 36788898887 6777655 89999999999999988889999999999999999999 67778899999999999999
Q ss_pred ccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCC-CCccCccCCCCcceeecccccccccC
Q 002321 159 NRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEG-EIPKGVESLKNLRVINLSKNMFSGSI 237 (936)
Q Consensus 159 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (936)
|+|++..|..|+++++|++|+|++|++++..+..++++++|++|+|++|.+++ .+|..+.++++|++|+|++|++++..
T Consensus 90 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 90 NPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred CcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 99999999999999999999999999999888899999999999999999986 57999999999999999999999998
Q ss_pred CcccccccCcc----eeeccccccCCCCchhhhccccccEEeccCcccc-CCCCcccccCCccceecc------------
Q 002321 238 PDGIGSCSLLR----TIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFS-GEVPKWIGELESLETLDL------------ 300 (936)
Q Consensus 238 p~~l~~l~~L~----~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L------------ 300 (936)
+..|+.+++|+ +|++++|.+++..+..+... +|+.|++++|.++ +..|..+..+++|+.+++
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~ 248 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE 248 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc
Confidence 99999888776 89999999997777766665 8999999999986 455666777777766655
Q ss_pred ---------------------cCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCCh
Q 002321 301 ---------------------SGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQ 359 (936)
Q Consensus 301 ---------------------~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 359 (936)
..|.+.+.+|. +..+++|+.|++++|.++ .+| .+..+++|+.|++++|.+ +.+|.
T Consensus 249 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~ 324 (606)
T 3vq2_A 249 IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPT 324 (606)
T ss_dssp CCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCC
T ss_pred ccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-ccccc
Confidence 66677777776 889999999999999997 455 888999999999999999 68886
Q ss_pred hhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCC--ChhhhcccccCCeeeccCccccCCCCcccc
Q 002321 360 WIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGE--TPATIGALSGLQLLNLSRNSLVGPIPVAIG 437 (936)
Q Consensus 360 ~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 437 (936)
+ ....++.|.+.+|...... .+..+++|++|++++|++++. .+..+..+++|++|+|++|.+++ +|..+.
T Consensus 325 ~-~l~~L~~L~l~~n~~~~~~------~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~ 396 (606)
T 3vq2_A 325 L-DLPFLKSLTLTMNKGSISF------KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFM 396 (606)
T ss_dssp C-CCSSCCEEEEESCSSCEEC------CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCT
T ss_pred C-CCCccceeeccCCcCccch------hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhcc
Confidence 6 6678999999999543311 345789999999999999876 38889999999999999999985 668999
Q ss_pred CcccCCeeecCCccccccCC-CCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccC-CCcccccccCCcc
Q 002321 438 DLKALNVLDLSENWLNGSIP-PEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTG-PIPIAIAKLTNLQ 515 (936)
Q Consensus 438 ~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~ 515 (936)
.+++|+.|++++|++++..| ..+..+++|+.|++++|.+++..|..+.++++|++|+|++|++++ .+|..+..+++|+
T Consensus 397 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 476 (606)
T 3vq2_A 397 GLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLT 476 (606)
T ss_dssp TCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred CCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCC
Confidence 99999999999999998777 689999999999999999999999999999999999999999998 4799999999999
Q ss_pred EEEcCCCcccCCCCcccccccccCeeecCCCcccccCCC-CCccCcCCCccccCCC
Q 002321 516 NVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPA-GGFFNTISPSSVLGNP 570 (936)
Q Consensus 516 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~gn~ 570 (936)
+|+|++|++++..|..+..+++|++|+|++|++++.+|. -..+..+....+.+|.
T Consensus 477 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 477 FLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCc
Confidence 999999999998899999999999999999999998775 3445566666677774
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-52 Score=493.83 Aligned_cols=472 Identities=19% Similarity=0.192 Sum_probs=348.5
Q ss_pred CceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEE
Q 002321 76 NRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVIS 155 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~ 155 (936)
.+++.|+|+++.+++..+..+.++++|++|+|++|++++..+..|.++++|++|+|++|+++ .+++..|.++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC-ccCHhhhcCcccccccc
Confidence 46788888888888777777888888888888888888777778888888888888888887 56777788888888888
Q ss_pred ccCccCCCCCCCCccccccccccccccccccCC-CCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCc----ceeeccc
Q 002321 156 LAKNRFSGKIPSSLSLCSTLATINLSSNRFSSP-LPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNL----RVINLSK 230 (936)
Q Consensus 156 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~L~~ 230 (936)
|++|++++..+..|+.+++|++|+|++|++++. +|..|.++++|++|++++|++++..+..+..+++| +.|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 888888876666788888888888888888873 57888888888888888888887777778777777 7888888
Q ss_pred ccccccCCcccccccCcceeeccccccCC-CCchhhhcccc--------------------------------ccEEecc
Q 002321 231 NMFSGSIPDGIGSCSLLRTIDFSENSFSG-NLPETMQKLSL--------------------------------CNFMNLR 277 (936)
Q Consensus 231 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~--------------------------------L~~L~L~ 277 (936)
|.+++..|..|..+ +|++|++++|.... ..+..+..++. ++.++++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 88887777777665 78888888874321 11222222222 3344555
Q ss_pred Cc-cccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccC
Q 002321 278 KN-LFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGD 356 (936)
Q Consensus 278 ~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 356 (936)
+| .+.+..|..+..+++|++|++++|+++ .+|..+..+ +|+.|++++|.++ .+|. ..+++|+.|++++|.+.+.
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNA 340 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCB
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCccccc
Confidence 55 566667777777777788888877777 466666666 7778888777777 4443 4667777778877777665
Q ss_pred CChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCC-cc
Q 002321 357 LPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIP-VA 435 (936)
Q Consensus 357 ~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~ 435 (936)
.+. .....++.|++.+|.+.... ..+..+..+++|++|++++|.+++..+. +..+++|++|++++|++.+..+ ..
T Consensus 341 ~~~-~~~~~L~~L~l~~n~l~~~~--~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 416 (570)
T 2z63_A 341 FSE-VDLPSLEFLDLSRNGLSFKG--CCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSV 416 (570)
T ss_dssp CCC-CBCTTCCEEECCSSCCBEEE--EEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCT
T ss_pred ccc-ccCCCCCEEeCcCCccCccc--cccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhh
Confidence 554 33356777777777765432 1122334567778888888877755444 7777788888888888776555 46
Q ss_pred ccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccC-CcCccccccccccccccccCccccCCCcccccccCCc
Q 002321 436 IGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLA-GKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNL 514 (936)
Q Consensus 436 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 514 (936)
+..+++|++|++++|.+++..|..+.++++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++..|..+..+++|
T Consensus 417 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 496 (570)
T 2z63_A 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496 (570)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCC
Confidence 777778888888888877777777777788888888888776 4677777778888888888888877777777778888
Q ss_pred cEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCCCcc
Q 002321 515 QNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFF 558 (936)
Q Consensus 515 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~ 558 (936)
++|+|++|++++..|..+.++++|+.|++++|+++|.+|...++
T Consensus 497 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 540 (570)
T 2z63_A 497 QVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 540 (570)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred CEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHH
Confidence 88888888887766667777788888888888888777765554
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-50 Score=480.12 Aligned_cols=478 Identities=19% Similarity=0.220 Sum_probs=282.6
Q ss_pred CccceeEEecCC-----------CCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEc
Q 002321 63 PCNWFGVKCSPR-----------SNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDL 131 (936)
Q Consensus 63 ~c~w~gv~c~~~-----------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 131 (936)
.|.|.|| |+.. ..+++.|+|+++++++..|..+.++++|++|+|++|+|++..|.+|.++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5999999 8642 125666666666666555555666666666666666666555566666666666666
Q ss_pred cCcccccccchhhhhcCCCCcEEEccCccCCC-CCCCCcccccccccccccccc-ccCCCCCCCCCCCCCCEEecCCCCC
Q 002321 132 SGNSLSGSIPDEFFKQCGSLRVISLAKNRFSG-KIPSSLSLCSTLATINLSSNR-FSSPLPLGIWGLSALRTLDLSDNLL 209 (936)
Q Consensus 132 s~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l 209 (936)
++|+++ .+++..|..+++|++|+|++|++++ ..|..++.+++|++|+|++|+ +..+.+..|.++++|++|+|++|.+
T Consensus 82 s~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCC-SCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCccC-ccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 666666 3455555666666666666666654 234556666666666666665 3333334566666666666666666
Q ss_pred CCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCC--c-hhhhccccccEEeccCccccCCCC
Q 002321 210 EGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNL--P-ETMQKLSLCNFMNLRKNLFSGEVP 286 (936)
Q Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~--~-~~l~~l~~L~~L~L~~N~l~~~~~ 286 (936)
++.+|..+.++++|++|+++.|.+.......+..+++|++|++++|++++.. + .....+++|+.|++++|.+++..+
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 240 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF 240 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH
T ss_pred cccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH
Confidence 6656666666666666666666655322222334566666666666665532 1 122334556666666666554333
Q ss_pred c----ccccCCccceecccCceeccccC------cccccccccceEEccCCccccc-----CChhhhccCCCCEEEccCC
Q 002321 287 K----WIGELESLETLDLSGNKFSGAVP------ISIGNLQRLKVLNFSANRLTGS-----LPDSMANCMNLVALDFSQN 351 (936)
Q Consensus 287 ~----~~~~l~~L~~L~L~~N~l~~~~~------~~l~~l~~L~~L~L~~N~l~~~-----~~~~~~~l~~L~~L~Ls~N 351 (936)
. .+..+++|+.|++++|.+.+... ..+..+.+|+.|++.++.+... ++..+....+|+.|++++|
T Consensus 241 ~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n 320 (549)
T 2z81_A 241 NELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320 (549)
T ss_dssp HHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESS
T ss_pred HHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccC
Confidence 2 22445566666666666554211 1234455666666666654421 1223344556677777777
Q ss_pred cCccCCChhhh--ccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCCh--hhhcccccCCeeeccCcc
Q 002321 352 SMNGDLPQWIF--SSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETP--ATIGALSGLQLLNLSRNS 427 (936)
Q Consensus 352 ~l~~~~p~~~~--~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~L~~N~ 427 (936)
.+. .+|..++ ...++.|++.+|.+....... +..++.+++|++|+|++|++++..+ ..+..+++|++|+|++|+
T Consensus 321 ~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~ 398 (549)
T 2z81_A 321 KVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKN-SACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNT 398 (549)
T ss_dssp CCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHH-HTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCC
T ss_pred ccc-cCCHHHHhcCccccEEEccCCccccccccc-hhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCC
Confidence 665 5555543 356666666666665321000 1123456667777777777764432 446667777777777777
Q ss_pred ccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCccc
Q 002321 428 LVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIA 507 (936)
Q Consensus 428 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 507 (936)
++ .+|..++.+++|++|+|++|++++ +|..+ .++|+.|+|++|+|++.+ ..+++|++|+|++|+++ .+|.
T Consensus 399 l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~- 468 (549)
T 2z81_A 399 FH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD- 468 (549)
T ss_dssp CC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-
T ss_pred Cc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-
Confidence 76 466666667777777777777663 34333 246777777777776432 45667777777777776 4554
Q ss_pred ccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCC
Q 002321 508 IAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPA 554 (936)
Q Consensus 508 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 554 (936)
...+++|++|||++|++++.+|..+..+++|+.|++++|++.|.+|.
T Consensus 469 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 469 ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 35667777777777777766666677777777777777777766664
No 15
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.4e-51 Score=487.42 Aligned_cols=437 Identities=20% Similarity=0.270 Sum_probs=382.8
Q ss_pred ccccEEeccCCcccCcCCCchhhcCCCcEEEccCccc------cc------ccchhhhhcCCCCcEEEccCccCCCCCCC
Q 002321 100 QFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSL------SG------SIPDEFFKQCGSLRVISLAKNRFSGKIPS 167 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l------~~------~i~~~~f~~l~~L~~L~L~~N~l~~~~p~ 167 (936)
.+++.|+|++|+++|.+|++|++|++|++|||++|.+ .| .+|.+. +.+|+ +++++|.+.+.+|.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~---~~~l~-l~l~~~~l~~~~~~ 156 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ---KQKMR-MHYQKTFVDYDPRE 156 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH---HHHHH-THHHHHHTCCCGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH---HHHHH-hhHHHhhhccCchh
Confidence 4688999999999999999999999999999999987 33 455554 45566 89999999988887
Q ss_pred Cccc-cccccccccc--------------------cccccCCCCCCCCCCCCCCEEecCCCCCCCC--------------
Q 002321 168 SLSL-CSTLATINLS--------------------SNRFSSPLPLGIWGLSALRTLDLSDNLLEGE-------------- 212 (936)
Q Consensus 168 ~~~~-l~~L~~L~L~--------------------~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-------------- 212 (936)
.+.. +..+..+++. +|++++ +|..++++++|++|+|++|.+++.
T Consensus 157 ~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~ 235 (636)
T 4eco_A 157 DFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYA 235 (636)
T ss_dssp GSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHH
T ss_pred hHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchh
Confidence 7663 2223333332 789999 899999999999999999999985
Q ss_pred ---CccCcc--CCCCcceeecccccccccCCcccccccCcceeeccccc-cCC-CCchhhhcc------ccccEEeccCc
Q 002321 213 ---IPKGVE--SLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENS-FSG-NLPETMQKL------SLCNFMNLRKN 279 (936)
Q Consensus 213 ---~~~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~~~~l~~l------~~L~~L~L~~N 279 (936)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+..+ ++|+.|+|++|
T Consensus 236 ~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n 315 (636)
T 4eco_A 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYN 315 (636)
T ss_dssp HHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSS
T ss_pred cccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCC
Confidence 999999 99999999999999999999999999999999999998 998 899998887 99999999999
Q ss_pred cccCCCCc--ccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCC-CCEEEccCCcCccC
Q 002321 280 LFSGEVPK--WIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMN-LVALDFSQNSMNGD 356 (936)
Q Consensus 280 ~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~ 356 (936)
+++ .+|. .++.+++|++|++++|+++|.+| .+.++++|++|+|++|+++ .+|..+..+++ |+.|++++|+++ .
T Consensus 316 ~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~ 391 (636)
T 4eco_A 316 NLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-Y 391 (636)
T ss_dssp CCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-S
T ss_pred cCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-c
Confidence 999 7888 89999999999999999999999 8999999999999999999 78889999999 999999999997 5
Q ss_pred CChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhc-------ccccCCeeeccCcccc
Q 002321 357 LPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIG-------ALSGLQLLNLSRNSLV 429 (936)
Q Consensus 357 ~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~ 429 (936)
+|..+. ...+++|++|++++|++++..|..+. .+++|++|+|++|+++
T Consensus 392 lp~~~~-------------------------~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~ 446 (636)
T 4eco_A 392 IPNIFD-------------------------AKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS 446 (636)
T ss_dssp CCSCCC-------------------------TTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC
T ss_pred cchhhh-------------------------hcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC
Confidence 554221 01245899999999999999999888 7889999999999999
Q ss_pred CCCCccccCcccCCeeecCCccccccCCCCCCC-c-------CCCcEEEecCCccCCcCccccc--cccccccccccCcc
Q 002321 430 GPIPVAIGDLKALNVLDLSENWLNGSIPPEIGG-A-------YSLKELRLERNFLAGKIPTSIE--NCSSLVSLILSKNN 499 (936)
Q Consensus 430 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l-------~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~L~~N~ 499 (936)
...+..+..+++|++|+|++|+++ .+|..+.. . ++|+.|+|++|+|+ .+|..+. .+++|++|+|++|+
T Consensus 447 ~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 524 (636)
T 4eco_A 447 KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNS 524 (636)
T ss_dssp SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSC
T ss_pred cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCC
Confidence 655556677999999999999999 56654433 3 29999999999999 7898887 99999999999999
Q ss_pred ccCCCcccccccCCccEEEc------CCCcccCCCCcccccccccCeeecCCCcccccCCCCCccCcCCCccccCCCCCC
Q 002321 500 LTGPIPIAIAKLTNLQNVDL------SFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNTISPSSVLGNPSLC 573 (936)
Q Consensus 500 l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~~c 573 (936)
+++ +|..+.++++|++|+| ++|++.+.+|..+.++++|++|+|++|++ +.+|.. .+..+....+.+|+..|
T Consensus 525 l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 525 FSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNIS 601 (636)
T ss_dssp CSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCE
T ss_pred CCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcc
Confidence 997 8999999999999999 56888999999999999999999999999 788875 44788888889999887
Q ss_pred CC
Q 002321 574 GS 575 (936)
Q Consensus 574 ~~ 575 (936)
-.
T Consensus 602 ~~ 603 (636)
T 4eco_A 602 ID 603 (636)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-49 Score=472.27 Aligned_cols=477 Identities=21% Similarity=0.230 Sum_probs=414.2
Q ss_pred CCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCC
Q 002321 85 GLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGK 164 (936)
Q Consensus 85 ~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~ 164 (936)
+.+++ .+|..+. +.+++|+|++|++++..+.+|.++++|++|||++|+++ .+++..|.++++|++|+|++|++++.
T Consensus 16 ~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~ 91 (570)
T 2z63_A 16 ELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSL 91 (570)
T ss_dssp SSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCC-ccCcccccCchhCCEEeCcCCcCCcc
Confidence 33444 4555443 57999999999999888889999999999999999998 68888899999999999999999998
Q ss_pred CCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCC-CCccCccCCCCcceeecccccccccCCccccc
Q 002321 165 IPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEG-EIPKGVESLKNLRVINLSKNMFSGSIPDGIGS 243 (936)
Q Consensus 165 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 243 (936)
.|..|+++++|++|+|++|++++..+..++++++|++|+|++|.+++ .+|..|.++++|++|++++|++++..+..++.
T Consensus 92 ~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 171 (570)
T 2z63_A 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 171 (570)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHH
T ss_pred CHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccc
Confidence 88999999999999999999998777789999999999999999997 46999999999999999999999888889999
Q ss_pred ccCc----ceeeccccccCCCCchhhhccccccEEeccCccccCC-CC------------------------------cc
Q 002321 244 CSLL----RTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGE-VP------------------------------KW 288 (936)
Q Consensus 244 l~~L----~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~~------------------------------~~ 288 (936)
+++| +.|++++|.+++..+..+... +|+.|++++|..... ++ ..
T Consensus 172 l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 250 (570)
T 2z63_A 172 LHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 250 (570)
T ss_dssp HHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTT
T ss_pred hhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhh
Confidence 9999 899999999998888888776 799999998843211 11 11
Q ss_pred cccCC--ccceecccCc-eeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccC
Q 002321 289 IGELE--SLETLDLSGN-KFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSG 365 (936)
Q Consensus 289 ~~~l~--~L~~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 365 (936)
+..+. .++.+++++| .+.+..+..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|.. ....
T Consensus 251 ~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~-~l~~ 326 (570)
T 2z63_A 251 LEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTL-KLKS 326 (570)
T ss_dssp TGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBC-BCSS
T ss_pred hccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcc-cccc
Confidence 22222 2456677777 778888899999999999999999998 588888888 9999999999998 66663 3467
Q ss_pred CccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCC--hhhhcccccCCeeeccCccccCCCCccccCcccCC
Q 002321 366 LNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGET--PATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALN 443 (936)
Q Consensus 366 l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 443 (936)
++.+.+.+|.+..... . ..+++|++|++++|++++.. +..+..+++|++|++++|++.+..+. +..+++|+
T Consensus 327 L~~L~l~~n~~~~~~~----~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~ 399 (570)
T 2z63_A 327 LKRLTFTSNKGGNAFS----E--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLE 399 (570)
T ss_dssp CCEEEEESCBSCCBCC----C--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCC
T ss_pred cCEEeCcCCccccccc----c--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCC
Confidence 9999999998764332 1 56899999999999998664 78899999999999999999965544 99999999
Q ss_pred eeecCCccccccCC-CCCCCcCCCcEEEecCCccCCcCccccccccccccccccCcccc-CCCcccccccCCccEEEcCC
Q 002321 444 VLDLSENWLNGSIP-PEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLT-GPIPIAIAKLTNLQNVDLSF 521 (936)
Q Consensus 444 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~ 521 (936)
+|++++|.+++..| ..+..+++|++|++++|.+++..|..+.++++|++|+|++|+++ +.+|..+..+++|++|+|++
T Consensus 400 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 479 (570)
T 2z63_A 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479 (570)
T ss_dssp EEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCC
Confidence 99999999998766 57899999999999999999999999999999999999999998 57899999999999999999
Q ss_pred CcccCCCCcccccccccCeeecCCCcccccCCC-CCccCcCCCccccCCCCCCCCCC
Q 002321 522 NSLTGGLPKQLVNLVHLSSFNISHNHLQGELPA-GGFFNTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 522 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~gn~~~c~~~~ 577 (936)
|++++..|..+..+++|++|++++|++++.+|. -..+..+....+.+||+.|.++.
T Consensus 480 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999988899999999999999999999987665 24567778888999999997664
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.5e-49 Score=471.17 Aligned_cols=484 Identities=22% Similarity=0.227 Sum_probs=406.4
Q ss_pred EecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCC
Q 002321 70 KCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCG 149 (936)
Q Consensus 70 ~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~ 149 (936)
.|.. ..| .+.++++++ .+|+.+. ++|++|+|++|+|++..|.+|.++++|++|+|++|+++ .+++..|..++
T Consensus 3 ~C~~--~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~ 74 (549)
T 2z81_A 3 SCDA--SGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TIEGDAFYSLG 74 (549)
T ss_dssp EECT--TSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCC-EECTTTTTTCT
T ss_pred cCCC--Cce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcC-ccChhhccccc
Confidence 5765 344 578888887 6777665 79999999999999988999999999999999999999 57778899999
Q ss_pred CCcEEEccCccCCCCCCCCccccccccccccccccccCC-CCCCCCCCCCCCEEecCCCCCCCCCc-cCccCCCCcceee
Q 002321 150 SLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSP-LPLGIWGLSALRTLDLSDNLLEGEIP-KGVESLKNLRVIN 227 (936)
Q Consensus 150 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ 227 (936)
+|++|+|++|++++..|..|+.+++|++|+|++|++++. .|..+.++++|++|+|++|.+.+.+| ..|.++++|++|+
T Consensus 75 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 75 SLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp TCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred cCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeee
Confidence 999999999999988888899999999999999999974 57789999999999999999554555 6899999999999
Q ss_pred cccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCC--C-cccccCCccceecccCce
Q 002321 228 LSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEV--P-KWIGELESLETLDLSGNK 304 (936)
Q Consensus 228 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~-~~~~~l~~L~~L~L~~N~ 304 (936)
+++|++++..|..++.+++|++|+++.|.+.......+..+++|+.|++++|++++.. + .....+++|+.|++++|+
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 234 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCE
T ss_pred ccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccc
Confidence 9999999999999999999999999999987443334567999999999999999753 2 223457899999999999
Q ss_pred eccccCc----ccccccccceEEccCCcccccC------ChhhhccCCCCEEEccCCcCccC-----CCh-hhhccCCcc
Q 002321 305 FSGAVPI----SIGNLQRLKVLNFSANRLTGSL------PDSMANCMNLVALDFSQNSMNGD-----LPQ-WIFSSGLNK 368 (936)
Q Consensus 305 l~~~~~~----~l~~l~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~Ls~N~l~~~-----~p~-~~~~~~l~~ 368 (936)
+++..+. .+..+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+... ++. ......++.
T Consensus 235 l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~ 314 (549)
T 2z81_A 235 LTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKR 314 (549)
T ss_dssp EEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCE
T ss_pred cchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceE
Confidence 9875543 3467789999999999987632 23456788999999999987532 111 122357899
Q ss_pred ccccccccccCCCCCCCCCC-CCCCcccEEeccCcccCCCChh---hhcccccCCeeeccCccccCCCC--ccccCcccC
Q 002321 369 VSFAENKIREGMNGPFASSG-SSFESLQFLDLSHNEFSGETPA---TIGALSGLQLLNLSRNSLVGPIP--VAIGDLKAL 442 (936)
Q Consensus 369 l~l~~n~l~~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L 442 (936)
+.+.+|.+..++ ..+ ..+++|++|+|++|++++..|. .++.+++|++|+|++|++++..+ ..+..+++|
T Consensus 315 L~l~~n~l~~ip-----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L 389 (549)
T 2z81_A 315 ITVENSKVFLVP-----CSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNL 389 (549)
T ss_dssp EEEESSCCCCCC-----HHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTC
T ss_pred EEeccCccccCC-----HHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCC
Confidence 999999987543 222 3578999999999999887653 47889999999999999986532 568999999
Q ss_pred CeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCC
Q 002321 443 NVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFN 522 (936)
Q Consensus 443 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 522 (936)
++|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..+. ++|++|+|++|++++.+ ..+++|++|+|++|
T Consensus 390 ~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N 461 (549)
T 2z81_A 390 TSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRN 461 (549)
T ss_dssp CEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSS
T ss_pred CEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCC
Confidence 99999999999 58889999999999999999998 4555443 68999999999999753 57899999999999
Q ss_pred cccCCCCcccccccccCeeecCCCcccccCCC-CCccCcCCCccccCCCCCCCCC
Q 002321 523 SLTGGLPKQLVNLVHLSSFNISHNHLQGELPA-GGFFNTISPSSVLGNPSLCGSA 576 (936)
Q Consensus 523 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~gn~~~c~~~ 576 (936)
+|+ .+|. ...+++|+.|+|++|++++.+|. -+.+..+....+.+||+.|+++
T Consensus 462 ~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 462 KLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred ccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 998 7776 57899999999999999987775 3566778888899999999876
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-49 Score=484.23 Aligned_cols=440 Identities=18% Similarity=0.205 Sum_probs=282.0
Q ss_pred ccccEEeccCCcccCcCCCchhhcCCCcEEEc-cCcccccccchhhhh--------------------------------
Q 002321 100 QFLRKLSLSSNNLTGSISPNLAKLQNLRVIDL-SGNSLSGSIPDEFFK-------------------------------- 146 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L-s~N~l~~~i~~~~f~-------------------------------- 146 (936)
..++.|+|++|+++|.+|++|++|++|++||| ++|.++|..|.....
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 999998774422110
Q ss_pred ------------------cCCCCcEEEccC--ccCCCCCCCCccccccccccccccccccC-----------------CC
Q 002321 147 ------------------QCGSLRVISLAK--NRFSGKIPSSLSLCSTLATINLSSNRFSS-----------------PL 189 (936)
Q Consensus 147 ------------------~l~~L~~L~L~~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 189 (936)
....++.+.+.. |++++ +|..|+++++|++|+|++|+|++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 011122222222 44444 44445555555555555555554 14
Q ss_pred CCCCC--CCCCCCEEecCCCCCCCCCccCccCCCCcceeeccccc-ccc-cCCccccccc-------CcceeeccccccC
Q 002321 190 PLGIW--GLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNM-FSG-SIPDGIGSCS-------LLRTIDFSENSFS 258 (936)
Q Consensus 190 ~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~Ls~N~l~ 258 (936)
|..++ ++++|++|+|++|.+.+.+|..|.++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 44444 44555555555554444444444445555555555554 444 4444333333 4555555555444
Q ss_pred CCCch--hhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccc-cceEEccCCcccccCCh
Q 002321 259 GNLPE--TMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQR-LKVLNFSANRLTGSLPD 335 (936)
Q Consensus 259 ~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~ 335 (936)
.+|. .+.++++|+.|+|++|.++ .+| .++.+++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 3444 4444444555555555444 344 4444444555555555444 44444444444 555555555444 3444
Q ss_pred hhhccCC--CCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCC--CCCcccEEeccCcccCCCChhh
Q 002321 336 SMANCMN--LVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGS--SFESLQFLDLSHNEFSGETPAT 411 (936)
Q Consensus 336 ~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~ 411 (936)
.+..+.. |+.|++++|++.+.+|. ++..+. .+++|+.|+|++|+++...+..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~------------------------l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~ 692 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRN------------------------ISCSMDDYKGINASTVTLSYNEIQKFPTEL 692 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSS------------------------CSSCTTTCCCCCEEEEECCSSCCCSCCHHH
T ss_pred hhhccccCCCCEEECcCCcCCCcccc------------------------chhhhccccCCCcCEEEccCCcCCccCHHH
Confidence 4433322 44445554444433332 122222 3458999999999999665566
Q ss_pred hcccccCCeeeccCccccCCCCccccC--------cccCCeeecCCccccccCCCCCC--CcCCCcEEEecCCccCCcCc
Q 002321 412 IGALSGLQLLNLSRNSLVGPIPVAIGD--------LKALNVLDLSENWLNGSIPPEIG--GAYSLKELRLERNFLAGKIP 481 (936)
Q Consensus 412 ~~~l~~L~~L~L~~N~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p 481 (936)
+..+++|+.|+|++|+++ .+|..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|
T Consensus 693 ~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp 769 (876)
T 4ecn_A 693 FATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FP 769 (876)
T ss_dssp HHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred HccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cc
Confidence 678999999999999999 55554433 339999999999999 6888887 99999999999999996 89
Q ss_pred cccccccccccccccC------ccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCC
Q 002321 482 TSIENCSSLVSLILSK------NNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAG 555 (936)
Q Consensus 482 ~~l~~l~~L~~L~L~~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 555 (936)
..+.++++|+.|+|++ |++.+.+|..+.++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++...-+.
T Consensus 770 ~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~- 845 (876)
T 4ecn_A 770 TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVT- 845 (876)
T ss_dssp CGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECG-
T ss_pred hhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChH-
Confidence 9999999999999976 888999999999999999999999999 68998876 6999999999999854332
Q ss_pred CccC--cCCCccccCCCCCC--CCC
Q 002321 556 GFFN--TISPSSVLGNPSLC--GSA 576 (936)
Q Consensus 556 ~~~~--~~~~~~~~gn~~~c--~~~ 576 (936)
.+.. ......+.+|+..| ||+
T Consensus 846 ~~~~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 846 SVCPYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp GGHHHHHTTCCEEECCTTSEEESCG
T ss_pred HccccccchheeecCCCccccCCCC
Confidence 2211 12334455666544 544
No 19
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.6e-50 Score=434.00 Aligned_cols=244 Identities=25% Similarity=0.313 Sum_probs=204.3
Q ss_pred cccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
.++..++||+|+||+||+|++. +++.||||+++........++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3455678999999999999963 4678999999766555557889999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEE
Q 002321 765 IYEFVSGGSLHKHLHEGSG-------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKV 831 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl 831 (936)
|||||++|+|.++++.... ...+++.++.+|+.|||+||+|||+++||||||||+|||+++++.+||
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEE
Confidence 9999999999999965321 124899999999999999999999999999999999999999999999
Q ss_pred eeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH---
Q 002321 832 GDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL--- 907 (936)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~--- 907 (936)
+|||+|+.....+.........||+.|||||++. ...|+.++|||||||++|||+| |+.||.+............
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~-~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~ 265 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 265 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCC
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHh-CCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 9999998775544444455677999999999984 4579999999999999999998 8999988766433321110
Q ss_pred --HHHhhhccccceeecccccccccccccC
Q 002321 908 --EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 908 --~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+...++.+.+++.+||..||.+||+|+
T Consensus 266 ~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ 295 (308)
T 4gt4_A 266 LPCPDDCPAWVYALMIECWNEFPSRRPRFK 295 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHH
Confidence 1233456788999999999999999984
No 20
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.8e-50 Score=431.83 Aligned_cols=244 Identities=23% Similarity=0.350 Sum_probs=204.2
Q ss_pred ccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQL 763 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (936)
..|...++||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 44567789999999999999864 47789999997543 344678999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEee
Q 002321 764 LIYEFVSGGSLHKHLHEGS----------GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGD 833 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (936)
+|||||++|+|.++++... ....+++.++.+|+.|||+||+|||+++|+||||||+|||+++++.+||+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~D 171 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD 171 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECC
Confidence 9999999999999997642 223599999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----H
Q 002321 834 YGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----L 907 (936)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~ 907 (936)
||+|+.....+.........||+.|||||++. ...|+.++|||||||++|||+| |+.||...+......... .
T Consensus 172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~-~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~ 250 (299)
T 4asz_A 172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ 250 (299)
T ss_dssp CSCHHHHTGGGCEEETTTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCC
T ss_pred cccceecCCCCceeecCceecChhhcCHHHHc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99998775544444445567899999999984 5579999999999999999999 999998876643332111 1
Q ss_pred HHHhhhccccceeecccccccccccccC
Q 002321 908 EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 908 ~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.|...++++.+++.+||..||.+||+|+
T Consensus 251 ~p~~~~~~~~~li~~cl~~dP~~RPs~~ 278 (299)
T 4asz_A 251 RPRTCPQEVYELMLGCWQREPHMRKNIK 278 (299)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCccchHHHHHHHHHHcCCChhHCcCHH
Confidence 1334557889999999999999999985
No 21
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=467.23 Aligned_cols=456 Identities=21% Similarity=0.255 Sum_probs=388.0
Q ss_pred EEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccC
Q 002321 79 IELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAK 158 (936)
Q Consensus 79 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~ 158 (936)
..|++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+++..|.++++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-YLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCC-EEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccC-CcChHHhhcccCCCEEecCC
Confidence 36889999998 6887776 89999999999999888889999999999999999998 56667789999999999999
Q ss_pred ccCCCCCCCCccccccccccccccccccC-CCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCc--ceeecccccc--
Q 002321 159 NRFSGKIPSSLSLCSTLATINLSSNRFSS-PLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNL--RVINLSKNMF-- 233 (936)
Q Consensus 159 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l-- 233 (936)
|+|++ +|.. .+++|++|+|++|+|++ ..|..|+++++|++|+|++|.+++ ..+..+++| ++|++++|++
T Consensus 79 N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Cceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 99994 5655 79999999999999998 468899999999999999999985 456777777 9999999999
Q ss_pred cccCCccccccc-CcceeeccccccCCCCch-hhhccccccEEeccCcc-------ccCCCCcccccCCccceecccCce
Q 002321 234 SGSIPDGIGSCS-LLRTIDFSENSFSGNLPE-TMQKLSLCNFMNLRKNL-------FSGEVPKWIGELESLETLDLSGNK 304 (936)
Q Consensus 234 ~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~L~~N~ 304 (936)
++..|..+..+. +...+++++|.+.+.+++ .+..+++|+.|++++|. +.+.+| .++.+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 778888887766 455678889988876654 57789999999999997 666666 78889999999999999
Q ss_pred eccccCcccc---cccccceEEccCCcccccCChhh-----hccCCCCEEEccCCcCccCCC-hhhhc----cCCccccc
Q 002321 305 FSGAVPISIG---NLQRLKVLNFSANRLTGSLPDSM-----ANCMNLVALDFSQNSMNGDLP-QWIFS----SGLNKVSF 371 (936)
Q Consensus 305 l~~~~~~~l~---~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~----~~l~~l~l 371 (936)
+++..+..+. ..++|++|++++|++++.+|..+ ..+++|+.+++++|.+ .+| ..+.. ..++.|.+
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l 309 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTV 309 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEE
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEc
Confidence 8864433221 23589999999999998899888 8899999999999998 566 33222 46899999
Q ss_pred cccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccC--CCCccccCcccCCeeecCC
Q 002321 372 AENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVG--PIPVAIGDLKALNVLDLSE 449 (936)
Q Consensus 372 ~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~ 449 (936)
.+|.+..... + ..+++|++|++++|++++..|..+..+++|++|+|++|++++ .+|..++.+++|++|+|++
T Consensus 310 ~~n~l~~~~~---~---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~ 383 (520)
T 2z7x_B 310 SGTRMVHMLC---P---SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQ 383 (520)
T ss_dssp ESSCCCCCCC---C---SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCS
T ss_pred CCCccccccc---h---hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCC
Confidence 9998765431 1 467899999999999999899999999999999999999986 5567899999999999999
Q ss_pred ccccccCCC-CCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCC
Q 002321 450 NWLNGSIPP-EIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGL 528 (936)
Q Consensus 450 N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 528 (936)
|++++.+|. .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+++ .+|..+..+++|++|+|++|+|+ .+
T Consensus 384 N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l 459 (520)
T 2z7x_B 384 NSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SV 459 (520)
T ss_dssp SCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CC
T ss_pred CcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-cc
Confidence 999985665 488899999999999999988888775 79999999999999 78888889999999999999999 56
Q ss_pred Ccc-cccccccCeeecCCCcccccCCCCCc
Q 002321 529 PKQ-LVNLVHLSSFNISHNHLQGELPAGGF 557 (936)
Q Consensus 529 p~~-l~~l~~L~~L~ls~N~l~~~~p~~~~ 557 (936)
|.. +..+++|++|++++|++++.++..++
T Consensus 460 ~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 489 (520)
T 2z7x_B 460 PDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 489 (520)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred CHHHhccCCcccEEECcCCCCcccCCchHH
Confidence 765 89999999999999999998775444
No 22
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.3e-50 Score=429.41 Aligned_cols=241 Identities=18% Similarity=0.212 Sum_probs=206.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||+||+|+.+ +|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 45788899999999999999976 689999999965432 233578999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||++||+|.+++++.+. +++.++..++.||+.||+|||+++|+||||||+|||++.+|.+||+|||+|+.+......
T Consensus 112 Ey~~gG~L~~~i~~~~~---l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999999987543 999999999999999999999999999999999999999999999999999987544444
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 922 (936)
......+||+.|||||++ .+..|+.++||||+||++|||++|+.||...+......... ..+...+++.++++.+
T Consensus 189 ~~~~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~ 267 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEK 267 (311)
T ss_dssp CCBCCCCSCGGGCCHHHH-HHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHH
T ss_pred ccccCcccCcccCCHHHH-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHH
Confidence 445567899999999998 45578999999999999999999999998876543332111 1123345678899999
Q ss_pred cccccccccccc
Q 002321 923 SCKGSSRQRRRF 934 (936)
Q Consensus 923 ~l~~~p~~Rp~f 934 (936)
||..||.+||+.
T Consensus 268 lL~~dp~~R~t~ 279 (311)
T 4aw0_A 268 LLVLDATKRLGC 279 (311)
T ss_dssp HSCSSGGGSTTS
T ss_pred HccCCHhHCcCh
Confidence 999999999975
No 23
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.5e-49 Score=432.26 Aligned_cols=244 Identities=24% Similarity=0.350 Sum_probs=196.1
Q ss_pred ccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQL 763 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (936)
..+...++||+|+||+||+|+++ +++.||||+++... ....++|.+|++++++++|||||+++|+|.+....+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 34566778999999999999865 47889999997543 334678999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEE
Q 002321 764 LIYEFVSGGSLHKHLHEGSG------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKV 831 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl 831 (936)
+|||||++|+|.++++.... ...+++.++++|+.|+|+||+|||+++||||||||+|||+++++.+||
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki 199 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 199 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEE
Confidence 99999999999999976432 235899999999999999999999999999999999999999999999
Q ss_pred eeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH----
Q 002321 832 GDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW---- 906 (936)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~---- 906 (936)
+|||+|+.....+.........||+.|||||++ ....|+.++|||||||++|||+| |+.||.............
T Consensus 200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~-~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~ 278 (329)
T 4aoj_A 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE 278 (329)
T ss_dssp CCCC----------------CCCCGGGCCHHHH-TTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCC
T ss_pred cccccceeccCCCcceecCcccccccccChhhh-cCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC
Confidence 999999877554444455567799999999998 45578999999999999999999 999998876543322111
Q ss_pred -HHHHhhhccccceeecccccccccccccC
Q 002321 907 -LEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 907 -~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..|...++++.+++.+||..||.+||+|+
T Consensus 279 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ 308 (329)
T 4aoj_A 279 LERPRACPPEVYAIMRGCWQREPQQRHSIK 308 (329)
T ss_dssp CCCCTTCCHHHHHHHHHHCCSSTTTSCCHH
T ss_pred CCCcccccHHHHHHHHHHcCcChhHCcCHH
Confidence 11334567889999999999999999985
No 24
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-49 Score=424.97 Aligned_cols=242 Identities=25% Similarity=0.358 Sum_probs=193.0
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...++..++||+|+||+||+|++++ .||||+++..... ...++|.+|++++++++|||||++++++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3445677889999999999999753 6999999754432 345789999999999999999999999864 56799999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
||++|+|.++++.... .+++.++.+|+.|||+||+|||+++||||||||+|||+++++.+||+|||+|+.........
T Consensus 112 y~~gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 112 WCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred cCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999976432 39999999999999999999999999999999999999999999999999998765433333
Q ss_pred ccccccCcccccCcccccC--cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH----------HHhhhcc
Q 002321 848 LSSKIQSALGYMAPEFACR--TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE----------EHWKKAE 915 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~----------~~~~~~~ 915 (936)
......||+.|||||++.. ...|+.++|||||||++|||+||+.||.+.+........... +...++.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 269 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKA 269 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHH
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHH
Confidence 4455689999999998853 335899999999999999999999999876543222111111 1123466
Q ss_pred ccceeecccccccccccccC
Q 002321 916 WRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+++++.+||..||.+||+|+
T Consensus 270 l~~li~~cl~~dP~~RPs~~ 289 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFP 289 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHH
T ss_pred HHHHHHHHcCCCHhHCcCHH
Confidence 88999999999999999984
No 25
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2e-49 Score=430.60 Aligned_cols=243 Identities=23% Similarity=0.396 Sum_probs=198.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
-+.|+..++||+|+||+||+|+++ +|+.||||++...... ...+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 346788899999999999999976 6999999999765433 34578999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||++||+|.+++...+. ..+++.++..|+.||+.||+|||++||+||||||+|||++++|.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-- 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-- 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--
T ss_pred eCCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc--
Confidence 99999999999976442 347899999999999999999999999999999999999999999999999998764321
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-----HHhhhccccceee
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-----EHWKKAEWRNVSM 921 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 921 (936)
.......||+.|||||++ .+..|+.++||||+||++|||++|+.||...+........... +...++++++++.
T Consensus 180 ~~~~~~~GT~~YmAPE~l-~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~ 258 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEIC-ENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVS 258 (350)
T ss_dssp HHHHHHHSCCTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred ccccccCCCccccCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence 223446799999999998 4557899999999999999999999999887664333221111 1223467889999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+++
T Consensus 259 ~~L~~dP~~R~s~~ 272 (350)
T 4b9d_A 259 QLFKRNPRDRPSVN 272 (350)
T ss_dssp HHTCSSGGGSCCHH
T ss_pred HHccCChhHCcCHH
Confidence 99999999999863
No 26
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.8e-49 Score=424.85 Aligned_cols=236 Identities=22% Similarity=0.333 Sum_probs=201.5
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEec
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFV 769 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (936)
.|+..++||+|+||+||+|+++ +|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4677788999999999999986 699999999965432 23466889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccccc
Q 002321 770 SGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLS 849 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 849 (936)
+||+|.+++.+.. +++.++..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.+.... ...
T Consensus 154 ~gg~L~~~l~~~~----l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRR 227 (346)
T ss_dssp TTEEHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCB
T ss_pred CCCcHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Ccc
Confidence 9999999997643 8999999999999999999999999999999999999999999999999998764322 223
Q ss_pred ccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhccccceeec
Q 002321 850 SKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAEWRNVSMR 922 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 922 (936)
....||+.|||||++ ....|+.++||||+||++|||++|+.||.+............. +...++++++++.+
T Consensus 228 ~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 228 KSLVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHH
T ss_pred cccccCcCcCCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHH
Confidence 456899999999998 5567899999999999999999999999887664433221111 12234678899999
Q ss_pred cccccccccccc
Q 002321 923 SCKGSSRQRRRF 934 (936)
Q Consensus 923 ~l~~~p~~Rp~f 934 (936)
||..||.+||+.
T Consensus 307 ~L~~dP~~R~ta 318 (346)
T 4fih_A 307 LLVRDPAQRATA 318 (346)
T ss_dssp HSCSSTTTSCCH
T ss_pred HcCCChhHCcCH
Confidence 999999999985
No 27
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5e-48 Score=454.58 Aligned_cols=453 Identities=20% Similarity=0.207 Sum_probs=386.8
Q ss_pred cEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccccc
Q 002321 103 RKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSS 182 (936)
Q Consensus 103 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 182 (936)
++|++++|+|+ .+|..+. ++|++|+|++|+++ .+++..|..+++|++|+|++|+|++..|..|+.+++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 57999999999 5777776 89999999999999 57777899999999999999999998899999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCEEecCCCCCCC-CCccCccCCCCcceeecccccccccCCcccccccCc--ceeecccccc--
Q 002321 183 NRFSSPLPLGIWGLSALRTLDLSDNLLEG-EIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLL--RTIDFSENSF-- 257 (936)
Q Consensus 183 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~Ls~N~l-- 257 (936)
|+|+. +|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| ++|++++|.+
T Consensus 79 N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Cceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 99996 5555 89999999999999997 478999999999999999999986 467788888 9999999999
Q ss_pred CCCCchhhhccc-cccEEeccCccccCCCCc-ccccCCccceecccCce-------eccccCcccccccccceEEccCCc
Q 002321 258 SGNLPETMQKLS-LCNFMNLRKNLFSGEVPK-WIGELESLETLDLSGNK-------FSGAVPISIGNLQRLKVLNFSANR 328 (936)
Q Consensus 258 ~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~-------l~~~~~~~l~~l~~L~~L~L~~N~ 328 (936)
.+..|..+..+. ....+++++|.+.+.++. .+..+++|+.|++++|. +.+.++ .+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 888899888876 455678899998876654 67889999999999998 777776 78999999999999999
Q ss_pred ccccCChhhh---ccCCCCEEEccCCcCccCCChhhh------ccCCccccccccccccCCCCCCCCCCCCC---CcccE
Q 002321 329 LTGSLPDSMA---NCMNLVALDFSQNSMNGDLPQWIF------SSGLNKVSFAENKIREGMNGPFASSGSSF---ESLQF 396 (936)
Q Consensus 329 l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~~p~~~~------~~~l~~l~l~~n~l~~~~~~~~~~~~~~l---~~L~~ 396 (936)
+++..+..+. ..++|+.|++++|++.|.+|..++ ...++.+++.+|.+ ..+. ..+..+ .+|+.
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~----~~~~~~~~~~~L~~ 306 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQ----SYIYEIFSNMNIKN 306 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCT----HHHHHHHHTCCCSE
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecch----hhhhcccccCceeE
Confidence 8864433222 246999999999999999998763 24677778888777 3221 111111 46999
Q ss_pred EeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccc--cCCCCCCCcCCCcEEEecCC
Q 002321 397 LDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNG--SIPPEIGGAYSLKELRLERN 474 (936)
Q Consensus 397 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N 474 (936)
|++++|.+.... .+..+++|++|+|++|++++.+|..++.+++|++|+|++|++++ .+|..+..+++|+.|+|++|
T Consensus 307 L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N 384 (520)
T 2z7x_B 307 FTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN 384 (520)
T ss_dssp EEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSS
T ss_pred EEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCC
Confidence 999999986543 23688999999999999999899999999999999999999996 55677899999999999999
Q ss_pred ccCCcCcc-ccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCC
Q 002321 475 FLAGKIPT-SIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELP 553 (936)
Q Consensus 475 ~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 553 (936)
++++.+|. .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|
T Consensus 385 ~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~ 460 (520)
T 2z7x_B 385 SVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVP 460 (520)
T ss_dssp CCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCC
T ss_pred cCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccC
Confidence 99985666 488999999999999999988887765 79999999999999 89998999999999999999999 466
Q ss_pred CC--CccCcCCCccccCCCCCCCCCC
Q 002321 554 AG--GFFNTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 554 ~~--~~~~~~~~~~~~gn~~~c~~~~ 577 (936)
.. ..+..+....+.+||+.|+|++
T Consensus 461 ~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 461 DGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred HHHhccCCcccEEECcCCCCcccCCc
Confidence 54 3455677788899999998765
No 28
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.9e-48 Score=408.00 Aligned_cols=237 Identities=21% Similarity=0.296 Sum_probs=188.6
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
.|+..++||+|+||+||+|+.+ +|+.||||++...... ...+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 4777889999999999999975 6999999999755432 235679999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+ +|+|.+++.+... +++.++..++.|++.||+|||++||+||||||+|||+++++.+||+|||+|+......
T Consensus 94 y~-~g~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--- 166 (275)
T 3hyh_A 94 YA-GNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--- 166 (275)
T ss_dssp CC-CEEHHHHHHHSCS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred CC-CCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC---
Confidence 99 7899999987543 9999999999999999999999999999999999999999999999999998654322
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceeecc
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSMRS 923 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 923 (936)
......||+.|||||++.+..+++.++||||+||++|||++|+.||.+........... ..+...++++++++.+|
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~ 246 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 246 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHH
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 23456799999999999665556789999999999999999999998866543322111 11234557789999999
Q ss_pred ccccccccccc
Q 002321 924 CKGSSRQRRRF 934 (936)
Q Consensus 924 l~~~p~~Rp~f 934 (936)
|..||.+||+.
T Consensus 247 L~~dP~~R~s~ 257 (275)
T 3hyh_A 247 LIVNPLNRISI 257 (275)
T ss_dssp SCSSGGGSCCH
T ss_pred ccCChhHCcCH
Confidence 99999999975
No 29
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.3e-48 Score=410.84 Aligned_cols=234 Identities=26% Similarity=0.378 Sum_probs=193.2
Q ss_pred cCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEe----CCeeEEEE
Q 002321 693 NKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWT----QSLQLLIY 766 (936)
Q Consensus 693 ~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 766 (936)
+..++||+|+||+||+|+++ +++.||||++...... ...+.+.+|++++++++|||||++++++.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999976 5889999999755433 335779999999999999999999999875 34578999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCCEEEcC-CCCeEEeeccCccccCCC
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSN--IIHYNIKSSNVLIDG-SGEPKVGDYGLARLLPML 843 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~ 843 (936)
|||++|+|.+++++... +++.++..|+.||+.||+|||+++ |+||||||+|||++. +|.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 99999999999987543 899999999999999999999998 999999999999984 79999999999986432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH-------HHHHhhhccc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW-------LEEHWKKAEW 916 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~-------~~~~~~~~~~ 916 (936)
.......||+.|||||++. + .|+.++||||+||++|||++|+.||.+.+......... ..+...++++
T Consensus 185 ---~~~~~~~GTp~YmAPE~~~-~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 259 (290)
T 3fpq_A 185 ---SFAKAVIGTPEFMAPEMYE-E-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 259 (290)
T ss_dssp ---TSBEESCSSCCCCCGGGGG-T-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHH
T ss_pred ---CccCCcccCccccCHHHcC-C-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHH
Confidence 2234567999999999884 4 58999999999999999999999997654422211111 1122234578
Q ss_pred cceeecccccccccccccC
Q 002321 917 RNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f~ 935 (936)
++++.+||..||.+||+++
T Consensus 260 ~~li~~~L~~dP~~R~s~~ 278 (290)
T 3fpq_A 260 KEIIEGCIRQNKDERYSIK 278 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHH
T ss_pred HHHHHHHccCChhHCcCHH
Confidence 8999999999999999864
No 30
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.5e-46 Score=450.58 Aligned_cols=519 Identities=19% Similarity=0.177 Sum_probs=292.5
Q ss_pred CCCCCCCCCCCCCC---CCccce----eEEecCC---------CCceEEeccCCCCCCcccccccccCccccEEeccCCc
Q 002321 48 DPNGKLSSWSEDDD---TPCNWF----GVKCSPR---------SNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNN 111 (936)
Q Consensus 48 d~~~~l~sW~~~~~---~~c~w~----gv~c~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~ 111 (936)
|+...+++|..+.+ ++|.|. .|.|... +..++.|||++|.+++..+.+|.++++|++|+|++|+
T Consensus 8 ~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 8 DDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp -----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc
Confidence 33344566654432 235442 4667532 2356777777777775555567777777777777777
Q ss_pred ccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCC-CC
Q 002321 112 LTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSP-LP 190 (936)
Q Consensus 112 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~ 190 (936)
|+++.+.+|.+|++|++|+|++|+|+ .+|..+|.++++|++|+|++|+|++..+..|+++++|++|+|++|+|++. .|
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 77666667777777777777777776 56666777777777777777777766666677777777777777777653 45
Q ss_pred CCCCCCCCCCEEecCCCCCCCCCccCccCCCCcc----eeecccccccccCCcccccccCcceeeccccccCCC-Cchhh
Q 002321 191 LGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLR----VINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGN-LPETM 265 (936)
Q Consensus 191 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~~~~l 265 (936)
..+..+++|++|+|++|+|++..+..+..+.+++ .++++.|.++...+..+ ....++.+++.+|..... .+..+
T Consensus 167 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~ 245 (635)
T 4g8a_A 167 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCI 245 (635)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHH
T ss_pred hhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhh
Confidence 6666777777777777777766666665554433 46666777664443333 333455566655543311 11223
Q ss_pred hccccccEEeccCcc------------------------------cc---CCCCcccccCCccceecccCceeccccCcc
Q 002321 266 QKLSLCNFMNLRKNL------------------------------FS---GEVPKWIGELESLETLDLSGNKFSGAVPIS 312 (936)
Q Consensus 266 ~~l~~L~~L~L~~N~------------------------------l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 312 (936)
..+..++...+..+. .. ...+..+..+.+++.+++.+|.+.... .
T Consensus 246 ~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~ 323 (635)
T 4g8a_A 246 QGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--D 323 (635)
T ss_dssp HTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--G
T ss_pred cCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--c
Confidence 333333333222111 11 011122233344555555555544222 1
Q ss_pred cccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCC
Q 002321 313 IGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFE 392 (936)
Q Consensus 313 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~ 392 (936)
+.....|+.|++.+|.+.+..+. .+..|+.++++.|.+... +.......++.+.+..|.+..... .+.....+.
T Consensus 324 ~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~-~~~~~l~~L~~L~ls~n~l~~~~~--~~~~~~~~~ 397 (635)
T 4g8a_A 324 FSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA-FSEVDLPSLEFLDLSRNGLSFKGC--CSQSDFGTI 397 (635)
T ss_dssp GGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB-CCCCBCTTCCEEECCSSCCBEEEE--CCHHHHSCS
T ss_pred cccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC-cccccccccccchhhccccccccc--cccchhhhh
Confidence 33344555555555555433221 234445555555544321 112222344555555554432211 111122344
Q ss_pred cccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCC-ccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEe
Q 002321 393 SLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIP-VAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRL 471 (936)
Q Consensus 393 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 471 (936)
+|+.|+++.|.+.. .+..+..+++|+.+++++|......+ ..+..+++++.++++.|.+.+..+..+..+++|+.|+|
T Consensus 398 ~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~L 476 (635)
T 4g8a_A 398 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 476 (635)
T ss_dssp CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred hhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence 55666666555542 33445566666677776666654333 35666777777777777777666666777777777777
Q ss_pred cCCccC-CcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccc
Q 002321 472 ERNFLA-GKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQG 550 (936)
Q Consensus 472 s~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 550 (936)
++|.+. +..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+++|++|+|++|++++
T Consensus 477 s~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~ 556 (635)
T 4g8a_A 477 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 556 (635)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCB
T ss_pred hhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCC
Confidence 777643 3456677777777777777777776667777777777777777777776666667777777777777777776
Q ss_pred cCCCC-Ccc-CcCCCccccCCCCCCCCCC
Q 002321 551 ELPAG-GFF-NTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 551 ~~p~~-~~~-~~~~~~~~~gn~~~c~~~~ 577 (936)
.+|.. ..+ ..+....+.+|||.|+|.+
T Consensus 557 ~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 557 SKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 66542 112 3455566667777776655
No 31
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=426.32 Aligned_cols=237 Identities=22% Similarity=0.333 Sum_probs=202.4
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..++||+|+||+||+|+++ +|+.||||++..... ...+.+.+|+.+|++++|||||++++++.+.+..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 45788889999999999999986 599999999975533 2346689999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
|+||+|.++++... +++.++..|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 230 ~~gG~L~~~i~~~~----l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 303 (423)
T 4fie_A 230 LEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 303 (423)
T ss_dssp CTTEEHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CC
T ss_pred CCCCcHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cc
Confidence 99999999997643 8999999999999999999999999999999999999999999999999998764322 22
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhccccceee
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAEWRNVSM 921 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 921 (936)
....+||+.|||||++ ....|+.++||||+||++|||++|+.||.+............. ....++++++++.
T Consensus 304 ~~~~~GTp~YmAPEvl-~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~ 382 (423)
T 4fie_A 304 RKSLVGTPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 382 (423)
T ss_dssp BCCCEECTTTCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred ccccccCcCcCCHHHH-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHH
Confidence 3456899999999998 5567999999999999999999999999887664433221111 1123467889999
Q ss_pred ccccccccccccc
Q 002321 922 RSCKGSSRQRRRF 934 (936)
Q Consensus 922 ~~l~~~p~~Rp~f 934 (936)
+||..||.+||+.
T Consensus 383 ~~L~~dP~~R~ta 395 (423)
T 4fie_A 383 RLLVRDPAQRATA 395 (423)
T ss_dssp HHSCSSTTTSCCH
T ss_pred HHcCCChhHCcCH
Confidence 9999999999985
No 32
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5e-48 Score=417.75 Aligned_cols=235 Identities=20% Similarity=0.253 Sum_probs=193.9
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEec
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFV 769 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (936)
.|+..++||+|+||+||+|+++ +|+.||||+++.... ..+|+.++++++|||||++++++.+++..++||||+
T Consensus 59 ~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 59 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred heEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 4566778999999999999976 589999999975533 247999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC-CeEEeeccCccccCCCcc---
Q 002321 770 SGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG-EPKVGDYGLARLLPMLDR--- 845 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~~--- 845 (936)
+||+|.+++++... +++.++..++.|++.||+|||+++|+||||||+|||++.+| .+||+|||+|+.+.....
T Consensus 133 ~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 133 EGGSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp TTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred CCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 99999999987543 99999999999999999999999999999999999999998 699999999987643221
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH-HHHHHH------HHhhhccccc
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF-SVTWLE------EHWKKAEWRN 918 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~-~~~~~~------~~~~~~~~~~ 918 (936)
........||+.|||||++. +..|+.++||||+||++|||++|+.||......... .....+ +...++.+++
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~ 288 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVM-GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQ 288 (336)
T ss_dssp ----CCCCCCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHH
T ss_pred eecCCccccCccccCHHHHC-CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHH
Confidence 11233467999999999994 557999999999999999999999999876543222 111111 1224467889
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 289 li~~~L~~dP~~R~sa~ 305 (336)
T 4g3f_A 289 AIQEGLRKEPVHRASAM 305 (336)
T ss_dssp HHHHHTCSSGGGSCCHH
T ss_pred HHHHHccCCHhHCcCHH
Confidence 99999999999999863
No 33
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.5e-48 Score=423.89 Aligned_cols=246 Identities=27% Similarity=0.347 Sum_probs=205.7
Q ss_pred cccccCCCcccccCceEEEEEEeCC------CcEEEEEEeeccCccchHHHHHHHHHHHHcCCC-CCcceeeeEEEeC-C
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD------GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRH-PNLVTLEGYYWTQ-S 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~-~ 760 (936)
...|+..++||+|+||+||+|++.. ++.||||+++........+++.+|++++++++| ||||+++|+|... .
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 4567888899999999999998652 357999999776555556789999999999965 8999999999764 5
Q ss_pred eeEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSG-------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG 827 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~ 827 (936)
..++|||||++|+|.++++.... ...+++.++..++.|||+||+|||+++||||||||+|||+++++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~ 222 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 222 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCC
Confidence 68999999999999999975421 23589999999999999999999999999999999999999999
Q ss_pred CeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH
Q 002321 828 EPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW 906 (936)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~ 906 (936)
.+||+|||+|+.+.............||+.|||||++. ...|+.++|||||||++|||+| |+.||.+.+.........
T Consensus 223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~-~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i 301 (353)
T 4ase_A 223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 301 (353)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH
T ss_pred CEEECcchhhhhcccCCCceeeccccccccccCHHHHh-cCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999998775544444555677899999999984 5579999999999999999998 999998865432221111
Q ss_pred ------HHHHhhhccccceeecccccccccccccC
Q 002321 907 ------LEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 907 ------~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..|...++++++++.+||..||.+||+|+
T Consensus 302 ~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~ 336 (353)
T 4ase_A 302 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 336 (353)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHH
Confidence 11345567899999999999999999984
No 34
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.2e-48 Score=414.41 Aligned_cols=239 Identities=25% Similarity=0.310 Sum_probs=195.6
Q ss_pred ccccCCCcccccCceEEEEEEeC----CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR----DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
..|+..+.||+|+||+||+|+.. +++.||||+++..... .....+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 35788899999999999999863 4688999999654332 234568899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||++||+|.+++.+... +++.++..++.|++.||+|||++||+||||||+|||++++|.+||+|||+|+......
T Consensus 104 vmEy~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999999999987653 9999999999999999999999999999999999999999999999999998653222
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhcccccee
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVS 920 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 920 (936)
.......||+.|||||++ .+..|+.++||||+||++|||++|+.||...+......... ..+...++++++++
T Consensus 181 --~~~~~~~GT~~YmAPE~~-~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li 257 (304)
T 3ubd_A 181 --KKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLL 257 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHH-HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred --ccccccccCcccCCHHHh-ccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 233456799999999998 45578999999999999999999999998876643332211 11344567889999
Q ss_pred eccccccccccccc
Q 002321 921 MRSCKGSSRQRRRF 934 (936)
Q Consensus 921 ~~~l~~~p~~Rp~f 934 (936)
.+||..||.+||+.
T Consensus 258 ~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 258 RMLFKRNPANRLGA 271 (304)
T ss_dssp HHHTCSSGGGSTTC
T ss_pred HHHcccCHHHCCCC
Confidence 99999999999973
No 35
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.9e-47 Score=448.20 Aligned_cols=458 Identities=20% Similarity=0.235 Sum_probs=376.0
Q ss_pred EEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccC
Q 002321 79 IELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAK 158 (936)
Q Consensus 79 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~ 158 (936)
..++++++++++ +|..+. ++|++|+|++|+|++..+.+|.++++|++|+|++|+|+ .++++.|.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCC-cCCHHHhCCCCCCCEEECCC
Confidence 678888999985 777665 89999999999999888889999999999999999999 56777889999999999999
Q ss_pred ccCCCCCCCCccccccccccccccccccCC-CCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCc--ceeecccccc--
Q 002321 159 NRFSGKIPSSLSLCSTLATINLSSNRFSSP-LPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNL--RVINLSKNMF-- 233 (936)
Q Consensus 159 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l-- 233 (936)
|+|+ .+|.. .+++|++|+|++|++++. .|..|.++++|++|+|++|++++. .+..+++| ++|++++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999 45655 799999999999999984 468899999999999999999863 45555555 9999999999
Q ss_pred cccCCccccccc-CcceeeccccccCCCCch-hhhccccccEEeccCcc-----ccCCCCcccccCCccceecccCceec
Q 002321 234 SGSIPDGIGSCS-LLRTIDFSENSFSGNLPE-TMQKLSLCNFMNLRKNL-----FSGEVPKWIGELESLETLDLSGNKFS 306 (936)
Q Consensus 234 ~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~L~~N~-----l~~~~~~~~~~l~~L~~L~L~~N~l~ 306 (936)
++..|..|..+. ..-.+++++|.+.+.+++ .+..+++|+.+++++|. +.+. ...+..+++|+.|+++++.++
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcCc
Confidence 888888887765 222668899998876654 46678899999999985 2222 235677888888888888876
Q ss_pred cccCcc---cccccccceEEccCCcccccCChhh-----hccCCCCEEEccCCcCccCCChh-hh----ccCCccccccc
Q 002321 307 GAVPIS---IGNLQRLKVLNFSANRLTGSLPDSM-----ANCMNLVALDFSQNSMNGDLPQW-IF----SSGLNKVSFAE 373 (936)
Q Consensus 307 ~~~~~~---l~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~p~~-~~----~~~l~~l~l~~ 373 (936)
+..... ....++|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .+|.. ++ ...++.|.+.+
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~ 340 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISD 340 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEES
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccC
Confidence 432111 1123489999999999998888877 6777777777777777 55532 21 24688899999
Q ss_pred cccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCC--CCccccCcccCCeeecCCcc
Q 002321 374 NKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGP--IPVAIGDLKALNVLDLSENW 451 (936)
Q Consensus 374 n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~ 451 (936)
|.+..... ...+++|++|++++|++++..|..+..+++|++|+|++|++++. +|..++.+++|++|+|++|+
T Consensus 341 n~~~~~~~------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~ 414 (562)
T 3a79_B 341 TPFIHMVC------PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414 (562)
T ss_dssp SCCCCCCC------CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSC
T ss_pred CCcccccC------ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCc
Confidence 88754331 14678999999999999999999999999999999999999963 34679999999999999999
Q ss_pred ccccCCC-CCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCc
Q 002321 452 LNGSIPP-EIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPK 530 (936)
Q Consensus 452 l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 530 (936)
+++.+|. .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+++ .+|..+..+++|++|+|++|+|+ .+|.
T Consensus 415 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~ 490 (562)
T 3a79_B 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPD 490 (562)
T ss_dssp CBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCT
T ss_pred CCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCH
Confidence 9985655 588999999999999999988887765 79999999999999 67887789999999999999999 5776
Q ss_pred c-cccccccCeeecCCCcccccCCCCCccC
Q 002321 531 Q-LVNLVHLSSFNISHNHLQGELPAGGFFN 559 (936)
Q Consensus 531 ~-l~~l~~L~~L~ls~N~l~~~~p~~~~~~ 559 (936)
. +..+++|+.|++++|+++|.+|..+++.
T Consensus 491 ~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~ 520 (562)
T 3a79_B 491 GVFDRLTSLQYIWLHDNPWDCTCPGIRYLS 520 (562)
T ss_dssp TSTTTCTTCCCEECCSCCBCCCHHHHHHHH
T ss_pred HHHhcCCCCCEEEecCCCcCCCcchHHHHH
Confidence 6 9999999999999999999988655533
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.1e-46 Score=399.01 Aligned_cols=240 Identities=21% Similarity=0.281 Sum_probs=184.6
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC---------
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS--------- 760 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------- 760 (936)
.|+..+.||+|+||+||+|+++ +|+.||||+++........+.+.+|++++++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 3677789999999999999976 689999999976655455678999999999999999999999987544
Q ss_pred ---eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCc
Q 002321 761 ---LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLA 837 (936)
Q Consensus 761 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (936)
..++||||+++|+|.+++.........++..+..++.|++.||+|||++||+||||||+|||++.+|.+||+|||+|
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccc
Confidence 36899999999999999987654344667778899999999999999999999999999999999999999999999
Q ss_pred cccCCCccc----------cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH--HHH
Q 002321 838 RLLPMLDRY----------VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF--SVT 905 (936)
Q Consensus 838 ~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~--~~~ 905 (936)
+........ .......||+.|||||++. +..|+.++||||+||++|||++ ||......... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~-~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~ 241 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVR 241 (299)
T ss_dssp --------------------------CCCTTSCHHHHT-TCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHc-CCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHh
Confidence 876432211 1223456999999999984 5579999999999999999996 88764321111 110
Q ss_pred H--HHH--Hhhhccccceeeccccccccccccc
Q 002321 906 W--LEE--HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 906 ~--~~~--~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
. .++ ....+...+++.+||..||.+||+.
T Consensus 242 ~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~ 274 (299)
T 4g31_A 242 NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEA 274 (299)
T ss_dssp TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCH
Confidence 0 011 1122456789999999999999985
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.6e-45 Score=437.07 Aligned_cols=455 Identities=20% Similarity=0.215 Sum_probs=376.2
Q ss_pred ccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccc
Q 002321 102 LRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLS 181 (936)
Q Consensus 102 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 181 (936)
.+++++++|++++ +|..+. ++|++|||++|+|+ .++...|..+++|++|+|++|+|++..|..|+.+++|++|+|+
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 4899999999995 777664 89999999999999 6777889999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCEEecCCCCCCCC-CccCccCCCCcceeecccccccccCCcccccccCc--ceeecccccc-
Q 002321 182 SNRFSSPLPLGIWGLSALRTLDLSDNLLEGE-IPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLL--RTIDFSENSF- 257 (936)
Q Consensus 182 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~Ls~N~l- 257 (936)
+|+|+. +|.. .+++|++|+|++|++++. +|..|.++++|++|+|++|++++. .+..+++| ++|++++|++
T Consensus 109 ~N~l~~-lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQN-ISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCCE-ECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCCc-cCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 999995 5555 899999999999999963 468999999999999999999863 45666666 9999999999
Q ss_pred -CCCCchhhhccc-cccEEeccCccccCCCCc-ccccCCccceecccCce-----eccccCcccccccccceEEccCCcc
Q 002321 258 -SGNLPETMQKLS-LCNFMNLRKNLFSGEVPK-WIGELESLETLDLSGNK-----FSGAVPISIGNLQRLKVLNFSANRL 329 (936)
Q Consensus 258 -~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~-----l~~~~~~~l~~l~~L~~L~L~~N~l 329 (936)
++..|..+..+. ..-.++++.|.+.+.++. .+..+++|+.|++++|+ +.+. ...+..+++|+.|++.++.+
T Consensus 183 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEE
T ss_pred ccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcC
Confidence 888898888765 223568899998876665 56688999999999995 3322 23577888999999998887
Q ss_pred cccC----ChhhhccCCCCEEEccCCcCccCCChhhhc---cCCccccccccccccCCCCCCCC-CCC---CCCcccEEe
Q 002321 330 TGSL----PDSMANCMNLVALDFSQNSMNGDLPQWIFS---SGLNKVSFAENKIREGMNGPFAS-SGS---SFESLQFLD 398 (936)
Q Consensus 330 ~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---~~l~~l~l~~n~l~~~~~~~~~~-~~~---~l~~L~~L~ 398 (936)
++.. +..+ ...+|+.|++++|.+.|.+|..++. ..++.|.+.++..... .+|. .+. ...+|++|+
T Consensus 262 ~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~---~~p~~~~~~~~~~~~L~~L~ 337 (562)
T 3a79_B 262 TWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF---LFSKEALYSVFAEMNIKMLS 337 (562)
T ss_dssp CHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC---SSCHHHHHHHHHTCCCSEEE
T ss_pred cHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee---ecChhhhhhhhccCcceEEE
Confidence 7532 2222 2359999999999999999987753 4566666666555433 2221 000 124699999
Q ss_pred ccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCcccccc--CCCCCCCcCCCcEEEecCCcc
Q 002321 399 LSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGS--IPPEIGGAYSLKELRLERNFL 476 (936)
Q Consensus 399 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l 476 (936)
+++|.+.... ....+++|++|+|++|++++.+|..++.+++|++|+|++|++++. +|..+.++++|+.|+|++|++
T Consensus 338 l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l 415 (562)
T 3a79_B 338 ISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSL 415 (562)
T ss_dssp EESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCC
T ss_pred ccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcC
Confidence 9999986432 226889999999999999998999999999999999999999973 356789999999999999999
Q ss_pred CCcCcc-ccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCC
Q 002321 477 AGKIPT-SIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAG 555 (936)
Q Consensus 477 ~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~ 555 (936)
++.+|. .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+++ .+|..
T Consensus 416 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~ 491 (562)
T 3a79_B 416 NSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDG 491 (562)
T ss_dssp BSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTT
T ss_pred CCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHH
Confidence 985665 588999999999999999987777665 79999999999998 78988889999999999999999 46653
Q ss_pred --CccCcCCCccccCCCCCCCCCC
Q 002321 556 --GFFNTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 556 --~~~~~~~~~~~~gn~~~c~~~~ 577 (936)
..+..+....+.+||+.|+++.
T Consensus 492 ~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 492 VFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp STTTCTTCCCEECCSCCBCCCHHH
T ss_pred HHhcCCCCCEEEecCCCcCCCcch
Confidence 4566777888899999998765
No 38
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.8e-45 Score=397.67 Aligned_cols=237 Identities=22% Similarity=0.284 Sum_probs=182.1
Q ss_pred ccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC----eeEEEEE
Q 002321 692 LNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS----LQLLIYE 767 (936)
Q Consensus 692 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~e 767 (936)
+...++||+|+||+||+|+++ |+.||||+++... ......++|+..+.+++|||||++++++.+++ ..++|||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 455678999999999999985 8999999996442 12233445666778899999999999998653 5689999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCCCCEEEcCCCCeEEeeccCccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS--------NIIHYNIKSSNVLIDGSGEPKVGDYGLARL 839 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~--------~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (936)
|+++|+|.++++... +++..+.+++.|+++||+|||++ +|+||||||+|||++.++++||+|||+|+.
T Consensus 82 y~~~gsL~~~l~~~~----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 82 YHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp CCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCCCcHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999998653 89999999999999999999986 999999999999999999999999999987
Q ss_pred cCCCccc--cccccccCcccccCcccccCcc-----cCCchhhHHHHHHHHHHHHcCCCCCCccchh------------H
Q 002321 840 LPMLDRY--VLSSKIQSALGYMAPEFACRTV-----KITDKCDVYGFGVLVLEVVTGKRPLSTWKMM------------W 900 (936)
Q Consensus 840 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~------------~ 900 (936)
....... .......||+.|||||++.+.. .++.++|||||||++|||+||..||...... .
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 6433222 1223457999999999885432 4678999999999999999998776432210 0
Q ss_pred HHHH-HHH-H--------HHh----hhccccceeecccccccccccccC
Q 002321 901 WFSV-TWL-E--------EHW----KKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 901 ~~~~-~~~-~--------~~~----~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.... ... . ..+ ....+.+++.+||..||.+||+|+
T Consensus 238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 286 (303)
T 3hmm_A 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL 286 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHH
T ss_pred HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHH
Confidence 0000 000 0 011 113567899999999999999984
No 39
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-44 Score=416.60 Aligned_cols=378 Identities=20% Similarity=0.220 Sum_probs=282.5
Q ss_pred ccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccc
Q 002321 100 QFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATIN 179 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 179 (936)
++|++|+|++|+|++..|..|.++++|++|+|++|.+.+.++...|.++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999888999999999999999999998888888899999999999999999888888888888888888
Q ss_pred cccccccCCCCC--CCCCCCCCCEEecCCCCCCCCCccC-ccCCCCcceeecccccccccCCcccccc--cCcceeeccc
Q 002321 180 LSSNRFSSPLPL--GIWGLSALRTLDLSDNLLEGEIPKG-VESLKNLRVINLSKNMFSGSIPDGIGSC--SLLRTIDFSE 254 (936)
Q Consensus 180 L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~Ls~ 254 (936)
|++|++++..+. .|..+++|++|+|++|++++..|.. +.++++|++|+|++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 888888874443 3788888888888888888776765 6778888888888888887777777665 5677777777
Q ss_pred cccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccc---cccceEEccCCcccc
Q 002321 255 NSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNL---QRLKVLNFSANRLTG 331 (936)
Q Consensus 255 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l---~~L~~L~L~~N~l~~ 331 (936)
|.+.+..+..+.. .....+..+++|++|++++|++++..|..+..+ ++|+.|++++|.+.+
T Consensus 190 n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 253 (455)
T 3v47_A 190 ITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG 253 (455)
T ss_dssp CBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS
T ss_pred Ccccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc
Confidence 7766543332210 001123356788888888888887777666544 566677776666543
Q ss_pred cCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhh
Q 002321 332 SLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPAT 411 (936)
Q Consensus 332 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 411 (936)
.. +..+.+. +..+..
T Consensus 254 ~~--------------~~~~~~~---------------------------------------------------~~~~~~ 268 (455)
T 3v47_A 254 SS--------------FGHTNFK---------------------------------------------------DPDNFT 268 (455)
T ss_dssp CC--------------TTCCSSC---------------------------------------------------CCCTTT
T ss_pred cc--------------cchhhhc---------------------------------------------------cCcccc
Confidence 21 0111111 111111
Q ss_pred hcc--cccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccc
Q 002321 412 IGA--LSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSS 489 (936)
Q Consensus 412 ~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 489 (936)
+.. .++|++|++++|++++.+|..++.+++|++|+|++|++++..|..+.++++|+.|+|++|++++..|..|.++++
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred cccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 111 245666666666666666666777777777777777777767777777888888888888887777788888888
Q ss_pred cccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCCCcc
Q 002321 490 LVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFF 558 (936)
Q Consensus 490 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~ 558 (936)
|++|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|++|+|++|+++|.+|...++
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHH
Confidence 888888888888777888888889999999999988666667788899999999999999988865443
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.6e-44 Score=394.24 Aligned_cols=295 Identities=34% Similarity=0.564 Sum_probs=260.3
Q ss_pred CChhHHHHHHHHHHhccCCCCCCCCCCCCCCCCcc--ceeEEecCCC--CceEEeccCCCCCCc--ccccccccCccccE
Q 002321 31 SLNDDVLGLIVFKADIQDPNGKLSSWSEDDDTPCN--WFGVKCSPRS--NRVIELTLNGLSLTG--RIGRGLLQLQFLRK 104 (936)
Q Consensus 31 ~~~~~~~aLl~~k~~~~d~~~~l~sW~~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L~~ 104 (936)
|.++|++||++||+++.||. .+++|..+++ ||. |.||+|+..+ ++|+.|+|++++++| .+|+.++++++|++
T Consensus 3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~-~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPT-TLSSWLPTTD-CCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCTTSC-TTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccCCCCCCC-CCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 56799999999999999886 7899987666 888 9999998765 899999999999999 89999999999999
Q ss_pred EeccC-CcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccc
Q 002321 105 LSLSS-NNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSN 183 (936)
Q Consensus 105 L~L~~-n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 183 (936)
|+|++ |++++.+|..|.++++|++|+|++|++++.+|. .|..+++|++|+|++|+|++.+|..|+.+++|++|+|++|
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD-FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG-GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCH-HHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 99995 999999999999999999999999999977765 5788999999999999999889999999999999999999
Q ss_pred cccCCCCCCCCCCC-CCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCc
Q 002321 184 RFSSPLPLGIWGLS-ALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLP 262 (936)
Q Consensus 184 ~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 262 (936)
++++.+|..+..++ +|++|+|++|++++.+|..+..++ |++|+|++|++++..|..|..+++|++|+|++|++++.+|
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 99988898898888 899999999999988888888887 9999999999988888888899999999999999887666
Q ss_pred hhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCc-ccc
Q 002321 263 ETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANR-LTG 331 (936)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~ 331 (936)
. +..+++|+.|+|++|++++.+|.++..+++|++|+|++|++++.+|.. ..+++|+.|++++|+ +.|
T Consensus 239 ~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 239 K-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp G-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred c-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 5 777888888888888888888888888888888888888888777765 778888888888887 554
No 41
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.7e-44 Score=411.27 Aligned_cols=386 Identities=18% Similarity=0.214 Sum_probs=265.4
Q ss_pred cEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCC-CCCccccccccccccc
Q 002321 103 RKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKI-PSSLSLCSTLATINLS 181 (936)
Q Consensus 103 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~ 181 (936)
+.++.++++++ .+|. + .++|++|||++|+|+ .+++..|..+++|++|+|++|.+.+.+ +..|..+++|++|+|+
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCC-EECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccC-cCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 45667777776 3444 2 266777777777776 444455667777777777777665433 4456666666666666
Q ss_pred cccccCCCCCCCCCCCCCCEEecCCCCCCCCCccC--ccCCCCcceeecccccccccCCcc-cccccCcceeeccccccC
Q 002321 182 SNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKG--VESLKNLRVINLSKNMFSGSIPDG-IGSCSLLRTIDFSENSFS 258 (936)
Q Consensus 182 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~ 258 (936)
+|++++..|..|.++++|++|+|++|++++.++.. +.++++|++|+|++|++++..|.. +..+++|++|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 66666666666666666666666666666544333 556666666666666666554544 555556666666555555
Q ss_pred CCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcc--------cccccccceEEccCCccc
Q 002321 259 GNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPIS--------IGNLQRLKVLNFSANRLT 330 (936)
Q Consensus 259 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--------l~~l~~L~~L~L~~N~l~ 330 (936)
+..+..+..+. ..+|+.|++++|.+.+..+.. +..+++|+.|++++|+++
T Consensus 168 ~~~~~~l~~l~----------------------~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~ 225 (455)
T 3v47_A 168 SICEEDLLNFQ----------------------GKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFK 225 (455)
T ss_dssp CCCTTTSGGGT----------------------TCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCC
T ss_pred ccChhhhhccc----------------------cccccccccccCcccccchhhccccccccccccceeeeEecCCCccc
Confidence 54444443331 034455555555544332221 223455555666655555
Q ss_pred ccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChh
Q 002321 331 GSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPA 410 (936)
Q Consensus 331 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 410 (936)
+..|..+.... ..++|+.|++++|.+.+..
T Consensus 226 ~~~~~~~~~~~------------------------------------------------~~~~L~~L~l~~~~~~~~~-- 255 (455)
T 3v47_A 226 ESMAKRFFDAI------------------------------------------------AGTKIQSLILSNSYNMGSS-- 255 (455)
T ss_dssp HHHHHHHHHHT------------------------------------------------TTCCEEEEECTTCTTTSCC--
T ss_pred ccchhhhhccc------------------------------------------------cccceeeEeeccccccccc--
Confidence 54444443320 1246777777777765431
Q ss_pred hhcccccCCeeeccCccccCCCCccccCc--ccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCcccccccc
Q 002321 411 TIGALSGLQLLNLSRNSLVGPIPVAIGDL--KALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCS 488 (936)
Q Consensus 411 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 488 (936)
+..+.+.+..+..+..+ ++|+.|++++|.+++..|..+..+++|++|+|++|++++..|..|.+++
T Consensus 256 ------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 323 (455)
T 3v47_A 256 ------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT 323 (455)
T ss_dssp ------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred ------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc
Confidence 12233333333344433 6899999999999999999999999999999999999988899999999
Q ss_pred ccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCC-CccCcCCCcccc
Q 002321 489 SLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAG-GFFNTISPSSVL 567 (936)
Q Consensus 489 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~ 567 (936)
+|++|+|++|++++..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+.. ..+..+....+.
T Consensus 324 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 403 (455)
T 3v47_A 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 403 (455)
T ss_dssp TCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred cCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEcc
Confidence 9999999999999888999999999999999999999888999999999999999999999755432 456778888899
Q ss_pred CCCCCCCCCC
Q 002321 568 GNPSLCGSAV 577 (936)
Q Consensus 568 gn~~~c~~~~ 577 (936)
+|++.|.++.
T Consensus 404 ~N~l~~~~~~ 413 (455)
T 3v47_A 404 TNPWDCSCPR 413 (455)
T ss_dssp SSCBCCCTTT
T ss_pred CCCcccCCCc
Confidence 9999999873
No 42
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=398.53 Aligned_cols=241 Identities=20% Similarity=0.282 Sum_probs=196.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeC------Ce
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ------SL 761 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (936)
..|+..++||+|+||+||+|+++ +|+.||||+++..... ...+.+.+|+++|++++|||||++++++... ..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 35788889999999999999976 6999999999654332 3356788999999999999999999997643 56
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.|+|||||+ |+|.+++.... .+++.++..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 799999995 78999997654 39999999999999999999999999999999999999999999999999998764
Q ss_pred CCc--cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-----------
Q 002321 842 MLD--RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE----------- 908 (936)
Q Consensus 842 ~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~----------- 908 (936)
... .........||+.|||||++.+..+++.++||||+||++|||++|+.||.+.+...........
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 321 1223345689999999999877677899999999999999999999999887653322111000
Q ss_pred ----------------------H--Hhhhccccceeeccccccccccccc
Q 002321 909 ----------------------E--HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 909 ----------------------~--~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
. .-.+++..+++.+||..||.+||+-
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta 339 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISA 339 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCH
Confidence 0 0123456789999999999999974
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=9.4e-43 Score=399.25 Aligned_cols=388 Identities=24% Similarity=0.328 Sum_probs=213.2
Q ss_pred CceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCC-------------cEEEccCcccccccch
Q 002321 76 NRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNL-------------RVIDLSGNSLSGSIPD 142 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L-------------~~L~Ls~N~l~~~i~~ 142 (936)
.++..++++++++ |.+|++++++++|++|++++|+++|.+|.+++++++| ++|++++|++++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5677888888888 7888888999999999999988888888888887765 777777777773 443
Q ss_pred hhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCC
Q 002321 143 EFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKN 222 (936)
Q Consensus 143 ~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 222 (936)
-.++|++|+|++|++++ +|.. +++|++|++++|++++. +.. .++|++|+|++|++++ +| .+.++++
T Consensus 89 ----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 89 ----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp ----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred ----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 23677777777777776 5543 36777777777777752 211 2577777777777774 55 4777777
Q ss_pred cceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccC
Q 002321 223 LRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSG 302 (936)
Q Consensus 223 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 302 (936)
|++|++++|++++ +|..+ .+|++|++++|++++ +| .+..+++|+.|++++|.+++ +|.. .++|++|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcC
Confidence 7777777777774 44433 467777777777775 34 46777777777777777765 3332 24677777777
Q ss_pred ceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCC
Q 002321 303 NKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNG 382 (936)
Q Consensus 303 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~ 382 (936)
|+++ .+| .++.+++|++|++++|++++ +|.. .++|+.|++++|++.+ +|..
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---------------------- 275 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---------------------- 275 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC----------------------
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc----------------------
Confidence 7776 455 36677777777777777764 3332 3567777777776653 2211
Q ss_pred CCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCc-ccCCeeecCCccccccCCCCCC
Q 002321 383 PFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDL-KALNVLDLSENWLNGSIPPEIG 461 (936)
Q Consensus 383 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~ 461 (936)
+++|++|++++|++++.. . ..++|++|++++|++++ ++ .+ ++|++|++++|++++ +|..
T Consensus 276 --------~~~L~~L~ls~N~l~~l~-~---~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~-- 335 (454)
T 1jl5_A 276 --------PQSLTFLDVSENIFSGLS-E---LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL-- 335 (454)
T ss_dssp --------CTTCCEEECCSSCCSEES-C---CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC--
T ss_pred --------cCcCCEEECcCCccCccc-C---cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc--
Confidence 245666666666665421 1 11456666666666653 11 22 366666666666664 4433
Q ss_pred CcCCCcEEEecCCccCCcCccccccccccccccccCccccC--CCcccccccCCccEEEcCCCcccCCCCcccccccccC
Q 002321 462 GAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTG--PIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLS 539 (936)
Q Consensus 462 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 539 (936)
+++|+.|++++|+++ .+|. .+++|++|+|++|++++ .+|.++..+ +.|.+.|.+|.. +++|+
T Consensus 336 -~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~ 399 (454)
T 1jl5_A 336 -PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLK 399 (454)
T ss_dssp -CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC----------------
T ss_pred -CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCC
Confidence 356666666666666 3444 35666666666666665 455544432 234444455442 35667
Q ss_pred eeecCCCcccc--cCCC
Q 002321 540 SFNISHNHLQG--ELPA 554 (936)
Q Consensus 540 ~L~ls~N~l~~--~~p~ 554 (936)
.|++++|+++| .+|.
T Consensus 400 ~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 400 QLHVETNPLREFPDIPE 416 (454)
T ss_dssp -----------------
T ss_pred EEECCCCcCCccccchh
Confidence 77777777776 5553
No 44
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4e-43 Score=387.67 Aligned_cols=199 Identities=21% Similarity=0.319 Sum_probs=170.6
Q ss_pred ccccCCCcccccCceEEEEEEeC----CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR----DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (936)
+.|+..++||+|+||+||+|+.+ +++.||||++.... ...++.+|+++++++ +||||+++++++.+.+..++
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 45788899999999999999864 46789999986542 346688999999998 69999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC-CCeEEeeccCccccCCC
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS-GEPKVGDYGLARLLPML 843 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~~~~~ 843 (936)
||||+++|+|.++++. +++.++..++.|++.||+|||++||+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 98 vmE~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 98 AMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EEECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EEeCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 9999999999999853 8999999999999999999999999999999999999877 89999999999865422
Q ss_pred ccc--------------------------cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccc
Q 002321 844 DRY--------------------------VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWK 897 (936)
Q Consensus 844 ~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~ 897 (936)
... .......||+.|||||++.+...|+.++||||+||++|||++|+.||...+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 110 112235699999999998776679999999999999999999999996543
No 45
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.1e-43 Score=406.47 Aligned_cols=239 Identities=21% Similarity=0.284 Sum_probs=197.8
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHH---HHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFE---REVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
-+.|+..+.||+|+||+||+|+.+ +|+.||||++...... .....+. +++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 345788899999999999999977 5999999999654321 1223333 346677788999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
|+||||++||+|.+++.+... +++..+..++.||+.||+|||++|||||||||+|||++.+|++||+|||+|+.+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~---l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999999987653 99999999999999999999999999999999999999999999999999987643
Q ss_pred CccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH---HHHHHH----HHHhhhcc
Q 002321 843 LDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW---FSVTWL----EEHWKKAE 915 (936)
Q Consensus 843 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~---~~~~~~----~~~~~~~~ 915 (936)
.. ....+||+.|||||++.++..|+.++||||+||++|||++|+.||.+.+.... ...... .+...+++
T Consensus 345 ~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~ 420 (689)
T 3v5w_A 345 KK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 420 (689)
T ss_dssp CC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred CC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHH
Confidence 22 24468999999999986666799999999999999999999999987543211 111111 12334577
Q ss_pred ccceeeccccccccccccc
Q 002321 916 WRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f 934 (936)
+++++.+||..||.+|++.
T Consensus 421 a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 421 LRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp HHHHHHHHTCSCGGGCTTC
T ss_pred HHHHHHHHccCCHhHCCCC
Confidence 8999999999999999874
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.6e-42 Score=392.82 Aligned_cols=391 Identities=22% Similarity=0.276 Sum_probs=267.8
Q ss_pred cccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCC-------------CcEEEccCcc
Q 002321 94 RGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGS-------------LRVISLAKNR 160 (936)
Q Consensus 94 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~-------------L~~L~L~~N~ 160 (936)
|.-...++|++|++++|++ +.+|++|+++++|++|++++|+++|.+|.. ++.+++ |++|++++|.
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~-~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPG-NGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTT-SCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcc-cccchhcchhhhhhhhccCCCEEEecCCc
Confidence 3334568999999999999 789999999999999999999999888865 455554 5999999999
Q ss_pred CCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcc
Q 002321 161 FSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDG 240 (936)
Q Consensus 161 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 240 (936)
+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .
T Consensus 83 l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 83 LSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp CSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-C
T ss_pred ccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-c
Confidence 986 3432 3789999999999998 5543 4789999999999985 3322 1689999999999986 66 5
Q ss_pred cccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccc
Q 002321 241 IGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLK 320 (936)
Q Consensus 241 l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 320 (936)
|+.+++|++|++++|++++ +|..+ .+|+.|++++|.+++ +| .++.+++|++|++++|++++ +|... ++|+
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~ 218 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLE 218 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCC
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---Cccc
Confidence 8999999999999999986 45433 488999999999987 45 58889999999999999985 44322 5899
Q ss_pred eEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEecc
Q 002321 321 VLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLS 400 (936)
Q Consensus 321 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls 400 (936)
+|++++|+++ .+|. +..+++|+.|++++|++++ +|. .+++|++|+++
T Consensus 219 ~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~------------------------------~~~~L~~L~l~ 265 (454)
T 1jl5_A 219 SIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPD------------------------------LPPSLEALNVR 265 (454)
T ss_dssp EEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCS------------------------------CCTTCCEEECC
T ss_pred EEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-ccc------------------------------cccccCEEECC
Confidence 9999999998 5664 8889999999999998863 221 13689999999
Q ss_pred CcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcC
Q 002321 401 HNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKI 480 (936)
Q Consensus 401 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 480 (936)
+|++++ +|.. .++|++|++++|++++. |.. .++|++|++++|++++ ++.. .++|+.|++++|++++ +
T Consensus 266 ~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-l 332 (454)
T 1jl5_A 266 DNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-L 332 (454)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-C
T ss_pred CCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-c
Confidence 999986 4443 47899999999999862 211 2689999999999986 3321 2589999999999995 6
Q ss_pred ccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccC--CCCcccccccccCeeecCCCcccccCCCCCcc
Q 002321 481 PTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTG--GLPKQLVNLVHLSSFNISHNHLQGELPAGGFF 558 (936)
Q Consensus 481 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~ 558 (936)
|.. +++|++|++++|++++ +|. .+++|++|+|++|++++ .+|.++.. ++.|++.|.+|. ..
T Consensus 333 p~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~--~~ 395 (454)
T 1jl5_A 333 PAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPE--LP 395 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-----------
T ss_pred ccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccccccccc--cc
Confidence 664 5899999999999994 666 47899999999999998 67776654 346888888886 34
Q ss_pred CcCCCccccCCCCCC
Q 002321 559 NTISPSSVLGNPSLC 573 (936)
Q Consensus 559 ~~~~~~~~~gn~~~c 573 (936)
..+....+.+|+...
T Consensus 396 ~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 396 QNLKQLHVETNPLRE 410 (454)
T ss_dssp ---------------
T ss_pred CcCCEEECCCCcCCc
Confidence 667777777886543
No 47
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.4e-41 Score=406.93 Aligned_cols=472 Identities=21% Similarity=0.196 Sum_probs=380.0
Q ss_pred CceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEE
Q 002321 76 NRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVIS 155 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~ 155 (936)
.+++.|+|++|.+++..+.+|.+|++|++|+|++|+|++..+..|.++++|++|+|++|+|+ .+|...|+++++|++|+
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELN 154 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeec
Confidence 57899999999999776778999999999999999999877788999999999999999999 68888899999999999
Q ss_pred ccCccCCCC-CCCCccccccccccccccccccCCCCCCCCCCCCC----CEEecCCCCCCCCCccCccCCCCcceeeccc
Q 002321 156 LAKNRFSGK-IPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSAL----RTLDLSDNLLEGEIPKGVESLKNLRVINLSK 230 (936)
Q Consensus 156 L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (936)
|++|+|++. .|..++.+++|++|+|++|+|++..+..|..+.++ ..++++.|.++...+..+ ....++.+++.+
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~ 233 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRN 233 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEES
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhc
Confidence 999999864 67888999999999999999999888888766554 478999999985544444 445677777777
Q ss_pred cccccc-CCcccccccCcc------------------------------eeeccccccCC---CCchhhhccccccEEec
Q 002321 231 NMFSGS-IPDGIGSCSLLR------------------------------TIDFSENSFSG---NLPETMQKLSLCNFMNL 276 (936)
Q Consensus 231 N~l~~~-~p~~l~~l~~L~------------------------------~L~Ls~N~l~~---~~~~~l~~l~~L~~L~L 276 (936)
|..+.. .+..+..+..++ .+++..+.... ..+..+..+..++.+.+
T Consensus 234 n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~ 313 (635)
T 4g8a_A 234 NFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSL 313 (635)
T ss_dssp CCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEE
T ss_pred ccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccc
Confidence 754321 122233333333 33333332221 12334555667888888
Q ss_pred cCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCcc-
Q 002321 277 RKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNG- 355 (936)
Q Consensus 277 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~- 355 (936)
..|.+.... .+....+|+.|++.+|.+.+..+ ..+..|+.+++..|.+... .....+++|+.|++++|.+..
T Consensus 314 ~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~ 386 (635)
T 4g8a_A 314 VSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFK 386 (635)
T ss_dssp ESCEEEECG--GGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEE
T ss_pred ccccccccc--ccccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhccccccc
Confidence 888876543 35667789999999999985544 3567889999999988743 345578999999999999863
Q ss_pred -CCChhhh-ccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCC-hhhhcccccCCeeeccCccccCCC
Q 002321 356 -DLPQWIF-SSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGET-PATIGALSGLQLLNLSRNSLVGPI 432 (936)
Q Consensus 356 -~~p~~~~-~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~ 432 (936)
..+...+ ...++.+++..+.+.... ..+..+++|+.+++++|++.... +..+..+++++.+++++|.+.+..
T Consensus 387 ~~~~~~~~~~~~L~~L~~~~~~~~~~~-----~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~ 461 (635)
T 4g8a_A 387 GCCSQSDFGTISLKYLDLSFNGVITMS-----SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 461 (635)
T ss_dssp EECCHHHHSCSCCCEEECCSCSEEEEC-----SCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECC
T ss_pred cccccchhhhhhhhhhhcccccccccc-----ccccccccccchhhhhcccccccccccccccccccccccccccccccc
Confidence 2333332 256777887777765433 33456899999999998876554 456889999999999999999999
Q ss_pred CccccCcccCCeeecCCcccc-ccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCccccccc
Q 002321 433 PVAIGDLKALNVLDLSENWLN-GSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKL 511 (936)
Q Consensus 433 ~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 511 (936)
+..+..+++|+.|+|++|.+. +..|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+
T Consensus 462 ~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l 541 (635)
T 4g8a_A 462 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 541 (635)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTC
T ss_pred ccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCC
Confidence 999999999999999999854 4678899999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEcCCCcccCCCCcccccc-cccCeeecCCCcccccCCCCCccCcC
Q 002321 512 TNLQNVDLSFNSLTGGLPKQLVNL-VHLSSFNISHNHLQGELPAGGFFNTI 561 (936)
Q Consensus 512 ~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~ls~N~l~~~~p~~~~~~~~ 561 (936)
++|++|||++|+|++..|..+..+ ++|+.|+|++|+|.+.+...++..++
T Consensus 542 ~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl 592 (635)
T 4g8a_A 542 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWI 592 (635)
T ss_dssp TTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHH
T ss_pred CCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHH
Confidence 999999999999999999999998 68999999999999988765554443
No 48
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.4e-41 Score=383.42 Aligned_cols=363 Identities=19% Similarity=0.197 Sum_probs=273.9
Q ss_pred CCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCC
Q 002321 88 LTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPS 167 (936)
Q Consensus 88 l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~ 167 (936)
..+..+..++++++|++|+|++|+|++. | .+..+++|++|+|++|+|++ +| |..+++|++|+|++|+|++. +
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCC-C-
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCcee-e-
Confidence 3444555678888999999999999864 4 68889999999999999885 44 78888899999999988864 3
Q ss_pred CccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCc
Q 002321 168 SLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLL 247 (936)
Q Consensus 168 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 247 (936)
++.+++|++|+|++|++++. + +..+++|++|++++|++++. + ++++++|++|++++|+..+.+ .+..+++|
T Consensus 102 -~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L 172 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQL 172 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTC
T ss_pred -cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcC
Confidence 78888888888888888874 3 78888888888888888864 3 778888888888888655454 47778888
Q ss_pred ceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCC
Q 002321 248 RTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSAN 327 (936)
Q Consensus 248 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 327 (936)
++|++++|++++. | +..+++|+.|++++|.+++. .++.+++|++|++++|++++ +| ++.+++|+.|++++|
T Consensus 173 ~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 173 TTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp CEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred CEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 8888888888864 3 67777888888888888765 36777788888888888876 44 677778888888888
Q ss_pred cccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCC
Q 002321 328 RLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGE 407 (936)
Q Consensus 328 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 407 (936)
++++.. +..+++|+.|+++.|+ |+.|++++|.+.+.
T Consensus 244 ~l~~~~---~~~l~~L~~L~l~~n~-----------------------------------------L~~L~l~~n~~~~~ 279 (457)
T 3bz5_A 244 PLTELD---VSTLSKLTTLHCIQTD-----------------------------------------LLEIDLTHNTQLIY 279 (457)
T ss_dssp CCSCCC---CTTCTTCCEEECTTCC-----------------------------------------CSCCCCTTCTTCCE
T ss_pred cCCCcC---HHHCCCCCEEeccCCC-----------------------------------------CCEEECCCCccCCc
Confidence 877643 3456677777766553 34566677766555
Q ss_pred ChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccc
Q 002321 408 TPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENC 487 (936)
Q Consensus 408 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 487 (936)
+| ++.+++|+.|+|++|.+.+.+|. ...+|+.|++++| ++|+.|+|++|+|++. .++++
T Consensus 280 ~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l 338 (457)
T 3bz5_A 280 FQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL---DVSHN 338 (457)
T ss_dssp EE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC---CCTTC
T ss_pred cc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc---ccccC
Confidence 55 45667777777777776665553 3345556655554 5788888888888863 38888
Q ss_pred cccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCC
Q 002321 488 SSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPA 554 (936)
Q Consensus 488 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 554 (936)
++|+.|++++|++++ ++.|+.|++++|+++|. .++..|..+++++|+++|.||.
T Consensus 339 ~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 339 TKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp TTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred CcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 888888888888885 35667778888888865 3566788889999999998886
No 49
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.9e-41 Score=397.31 Aligned_cols=238 Identities=24% Similarity=0.359 Sum_probs=200.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..++||+|+||+||+|+.+ +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+....++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch-hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 45778889999999999999976 699999999976542 3457789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC--CCeEEeeccCccccCCCccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS--GEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~~~~ 846 (936)
|+||+|.+++.... ..+++.++..++.||+.||+|||+++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~-- 311 (573)
T 3uto_A 236 MSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 311 (573)
T ss_dssp CCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--
T ss_pred cCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--
Confidence 99999999986533 238999999999999999999999999999999999999854 899999999998775332
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH-H-----HH--Hhhhccccc
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW-L-----EE--HWKKAEWRN 918 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~-~-----~~--~~~~~~~~~ 918 (936)
......||+.|||||++ .+..|+.++||||+||++|||++|+.||.+.+......... . ++ ...++..++
T Consensus 312 -~~~~~~GT~~y~APEv~-~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~d 389 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVA-EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389 (573)
T ss_dssp -EEEEECSSGGGCCHHHH-TTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHH
T ss_pred -ceeeeEECccccCHHHh-CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence 22345799999999998 45678999999999999999999999998876643332111 0 11 123466789
Q ss_pred eeeccccccccccccc
Q 002321 919 VSMRSCKGSSRQRRRF 934 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f 934 (936)
++.+||..||.+||+.
T Consensus 390 li~~~L~~dp~~R~t~ 405 (573)
T 3uto_A 390 FIRKLLLADPNTRMTI 405 (573)
T ss_dssp HHHTTSCSSGGGSCCH
T ss_pred HHHHHccCChhHCcCH
Confidence 9999999999999975
No 50
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4e-39 Score=372.59 Aligned_cols=346 Identities=26% Similarity=0.386 Sum_probs=166.3
Q ss_pred cCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccc
Q 002321 98 QLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLAT 177 (936)
Q Consensus 98 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 177 (936)
.+++|+.|+++++.++. +| .+..+++|++|||++|++++ ++. |..+++|++|+|++|+++
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~-~~~--~~~l~~L~~L~l~~n~l~--------------- 103 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTD-ITP--LKNLTKLVDILMNNNQIA--------------- 103 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCC---------------
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCC-chh--hhccccCCEEECCCCccc---------------
Confidence 34555555555555553 22 35555555555555555552 222 444444444444444444
Q ss_pred cccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccccc
Q 002321 178 INLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSF 257 (936)
Q Consensus 178 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 257 (936)
+..+ +.++++|++|+|++|.+++..+ +.++++|++|++++|++++. + .+..+++|++|+++ |.+
T Consensus 104 ---------~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~ 167 (466)
T 1o6v_A 104 ---------DITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQV 167 (466)
T ss_dssp ---------CCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESC
T ss_pred ---------cChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-Ccc
Confidence 3322 4455555555555555553322 45555555555555555432 2 24555555555553 333
Q ss_pred CCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhh
Q 002321 258 SGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSM 337 (936)
Q Consensus 258 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 337 (936)
.+.. .+.++++|+.|++++|.+++. ..+..+++|++|++++|++++..+ ++.+++|+.|++++|++++. ..+
T Consensus 168 ~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l 239 (466)
T 1o6v_A 168 TDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTL 239 (466)
T ss_dssp CCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGG
T ss_pred cCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhh
Confidence 3221 134444444444444444322 124444555555555555543333 34445555555555554432 234
Q ss_pred hccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhccccc
Q 002321 338 ANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSG 417 (936)
Q Consensus 338 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 417 (936)
..+++|+.|++++|.+ ++..+ +..+++
T Consensus 240 ~~l~~L~~L~l~~n~l---------------------------------------------------~~~~~--~~~l~~ 266 (466)
T 1o6v_A 240 ASLTNLTDLDLANNQI---------------------------------------------------SNLAP--LSGLTK 266 (466)
T ss_dssp GGCTTCSEEECCSSCC---------------------------------------------------CCCGG--GTTCTT
T ss_pred hcCCCCCEEECCCCcc---------------------------------------------------ccchh--hhcCCC
Confidence 4444444444444444 33222 334444
Q ss_pred CCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccC
Q 002321 418 LQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSK 497 (936)
Q Consensus 418 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 497 (936)
|++|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|++|++++
T Consensus 267 L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 340 (466)
T 1o6v_A 267 LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYN 340 (466)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCS
T ss_pred CCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCC
Confidence 4444444444443222 4444455555555555443222 4455555555555555554333 45555555555555
Q ss_pred ccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccc
Q 002321 498 NNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQG 550 (936)
Q Consensus 498 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 550 (936)
|++++. ..+.++++|++|++++|++++..| +..+++|+.|++++|++++
T Consensus 341 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 341 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 555543 345555666666666666655444 5556666666666666655
No 51
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-39 Score=372.04 Aligned_cols=344 Identities=24% Similarity=0.355 Sum_probs=221.3
Q ss_pred CceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEE
Q 002321 76 NRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVIS 155 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~ 155 (936)
.+++.|++.+++++. +| .+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ ++. |..+++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc-Chh--hcCCCCCCEEE
Confidence 578899999998874 44 48899999999999999997654 9999999999999999995 444 89999999999
Q ss_pred ccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccc
Q 002321 156 LAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSG 235 (936)
Q Consensus 156 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (936)
|++|++++..+ +..+++|++|+|++|++++. + .+.++++|++|+++ |.+.+..+ +.++++|++|++++|++++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCC
Confidence 99999996543 88999999999999999874 3 48888999999986 55554433 7788888888888888874
Q ss_pred cCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCccccc
Q 002321 236 SIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGN 315 (936)
Q Consensus 236 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 315 (936)
. ..+..+++|++|++++|.+++..| +..+++|+.|++++|.+++. ..+..+++|++|++++|++++..+ +..
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 3 346777778888888777775544 55556666666666655542 234455555555555555543332 444
Q ss_pred ccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCccc
Q 002321 316 LQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQ 395 (936)
Q Consensus 316 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~ 395 (936)
+++|+.|++++|++++..+ +..++ +|+
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~---------------------------------------------------~L~ 290 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLT---------------------------------------------------ALT 290 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCT---------------------------------------------------TCS
T ss_pred CCCCCEEECCCCccCcccc--ccCCC---------------------------------------------------ccC
Confidence 4445555555554443222 33444 444
Q ss_pred EEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCc
Q 002321 396 FLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNF 475 (936)
Q Consensus 396 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 475 (936)
.|+|++|++++..+ +..+++|++|+|++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|+
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCc
Confidence 44444444443322 3444445555555554443332 34444445555555544432 234444455555555555
Q ss_pred cCCcCccccccccccccccccCccccC
Q 002321 476 LAGKIPTSIENCSSLVSLILSKNNLTG 502 (936)
Q Consensus 476 l~~~~p~~l~~l~~L~~L~L~~N~l~~ 502 (936)
+++..| +..+++|+.|++++|++++
T Consensus 365 l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 365 ISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred cCccch--hhcCCCCCEEeccCCcccC
Confidence 544333 4445555555555555543
No 52
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=365.43 Aligned_cols=242 Identities=21% Similarity=0.282 Sum_probs=195.1
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..+.||+|+||+||+|++. +|+.||||++.........+.+.+|++++++++||||+++++++.+....++||||
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 45677889999999999999975 68999999997665444456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++|+|.+++..... +++.++..++.|++.||+|||+.||+||||||+||++++++.+||+|||++........ ..
T Consensus 90 ~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~ 165 (347)
T 3zgw_A 90 CPGGELFDYIISQDR---LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD-YH 165 (347)
T ss_dssp CTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---------
T ss_pred CCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC-cc
Confidence 999999999976543 89999999999999999999999999999999999999999999999999876533221 22
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceeeccc
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSMRSC 924 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l 924 (936)
.....||+.|+|||++.+...++.++||||+||++|||++|+.||.+.+......... ..+.+.++.+.+++.+||
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L 245 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQML 245 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHT
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHc
Confidence 3345689999999998655556899999999999999999999998876543332111 113445567788999999
Q ss_pred ccccccccccC
Q 002321 925 KGSSRQRRRFQ 935 (936)
Q Consensus 925 ~~~p~~Rp~f~ 935 (936)
..||.+||+++
T Consensus 246 ~~dP~~Rps~~ 256 (347)
T 3zgw_A 246 QVDPKKRISMK 256 (347)
T ss_dssp CSSGGGSCCHH
T ss_pred ccCHhHCcCHH
Confidence 99999999863
No 53
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.6e-40 Score=360.90 Aligned_cols=240 Identities=23% Similarity=0.292 Sum_probs=203.1
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
..|+..+.||+|+||.||+|++. +|+.||||++...... ...+.+.+|++++++++||||+++++++......++|||
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 94 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence 34677889999999999999974 7999999999765432 335678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++|+|.+++..... +++.++..++.|+++||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 168 (328)
T 3fe3_A 95 YASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG--- 168 (328)
T ss_dssp CCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC---
T ss_pred CCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC---
Confidence 9999999999977543 8999999999999999999999999999999999999999999999999998664322
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceeecc
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSMRS 923 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 923 (936)
......||+.|+|||++.+....+.++||||+||++|||++|+.||...+......... ..+...+..+.+++.+|
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~ 248 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRF 248 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence 23456789999999998666555689999999999999999999998876543332211 11234557788999999
Q ss_pred cccccccccccC
Q 002321 924 CKGSSRQRRRFQ 935 (936)
Q Consensus 924 l~~~p~~Rp~f~ 935 (936)
|..||.+||+++
T Consensus 249 L~~dP~~R~t~~ 260 (328)
T 3fe3_A 249 LVLNPIKRGTLE 260 (328)
T ss_dssp CCSSTTTSCCHH
T ss_pred CCCChhHCcCHH
Confidence 999999999863
No 54
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-39 Score=352.52 Aligned_cols=239 Identities=21% Similarity=0.342 Sum_probs=202.0
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 345788889999999999999964 689999999865533 345778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++|+|.+++.... +++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...... .
T Consensus 98 ~~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S 171 (297)
T ss_dssp CCTTCBHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--C
T ss_pred CCCCCCHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--c
Confidence 999999999998653 8999999999999999999999999999999999999999999999999998664322 2
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhcccccee
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAEWRNVS 920 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 920 (936)
......+|+.|+|||++. +..++.++||||+||++|||++|+.||...+........... +...+..+++++
T Consensus 172 ~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 250 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 250 (297)
T ss_dssp CBCCCCSCGGGCCHHHHH-CSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHH
T ss_pred ccCCccCCcCccChhhhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHH
Confidence 234567899999999984 457899999999999999999999999887654333221111 223345688999
Q ss_pred ecccccccccccccC
Q 002321 921 MRSCKGSSRQRRRFQ 935 (936)
Q Consensus 921 ~~~l~~~p~~Rp~f~ 935 (936)
.+||..||.+||+++
T Consensus 251 ~~~l~~dp~~Rps~~ 265 (297)
T 3fxz_A 251 NRCLEMDVEKRGSAK 265 (297)
T ss_dssp HHHSCSSTTTSCCHH
T ss_pred HHHccCChhHCcCHH
Confidence 999999999999863
No 55
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.4e-39 Score=367.28 Aligned_cols=355 Identities=21% Similarity=0.244 Sum_probs=305.3
Q ss_pred CceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEE
Q 002321 76 NRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVIS 155 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~ 155 (936)
.+++.|+++++++++. | .+..+++|++|+|++|+|++. | ++.+++|++|+|++|+|++ ++ |..+++|++|+
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~---~~~l~~L~~L~ 112 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD---VTPLTKLTYLN 112 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC---CTTCTTCCEEE
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee---cCCCCcCCEEE
Confidence 6789999999999974 4 799999999999999999975 3 8999999999999999995 44 78999999999
Q ss_pred ccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccc
Q 002321 156 LAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSG 235 (936)
Q Consensus 156 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (936)
|++|++++. | ++.+++|++|++++|++++. .+..+++|++|++++|...+.+ .+..+++|++|++++|++++
T Consensus 113 L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 999999974 4 89999999999999999985 3889999999999999666565 48899999999999999997
Q ss_pred cCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCccccc
Q 002321 236 SIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGN 315 (936)
Q Consensus 236 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 315 (936)
+| +..+++|++|++++|++++. .+..+++|+.|++++|++++ +| ++.+++|+.|++++|++++.. ++.
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~ 252 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VST 252 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTT
T ss_pred -ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHH
Confidence 44 88999999999999999976 38889999999999999998 55 889999999999999999754 467
Q ss_pred ccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCccc
Q 002321 316 LQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQ 395 (936)
Q Consensus 316 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~ 395 (936)
+++|+.|++++|+ |+.|++++|.+.+.+|. +.+++|+
T Consensus 253 l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~~-----------------------------~~l~~L~ 289 (457)
T 3bz5_A 253 LSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQA-----------------------------EGCRKIK 289 (457)
T ss_dssp CTTCCEEECTTCC--------------CSCCCCTTCTTCCEEEC-----------------------------TTCTTCC
T ss_pred CCCCCEEeccCCC--------------CCEEECCCCccCCcccc-----------------------------cccccCC
Confidence 7899999988764 56788899987654431 3467899
Q ss_pred EEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCc
Q 002321 396 FLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNF 475 (936)
Q Consensus 396 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 475 (936)
.|++++|...+.+|. ..++|+.|++++| ++|++|+|++|++++. + ++.+++|+.|++++|+
T Consensus 290 ~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~ 350 (457)
T 3bz5_A 290 ELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAH 350 (457)
T ss_dssp CCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSC
T ss_pred EEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCC
Confidence 999999988777664 3456777766665 6899999999999984 3 8999999999999999
Q ss_pred cCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCccccc
Q 002321 476 LAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVN 534 (936)
Q Consensus 476 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 534 (936)
|++ ++.|..|++++|++.|. +++..|+.++|++|+++|.+|..+..
T Consensus 351 l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 351 IQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp CCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred CCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhc
Confidence 985 46788899999999975 46678889999999999999977543
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9e-40 Score=365.41 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=204.3
Q ss_pred cccccCCCcccccCceEEEEEEeC--------CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR--------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQ 759 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (936)
...|+..+.||+|+||.||+|++. ++..||||+++........+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 345778889999999999999863 35679999997665555567899999999999 899999999999999
Q ss_pred CeeEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC
Q 002321 760 SLQLLIYEFVSGGSLHKHLHEGSG-------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS 826 (936)
Q Consensus 760 ~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~ 826 (936)
+..++||||+++|+|.+++..... ...+++.++++++.|+++||+|||++||+||||||+|||++.+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 239 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence 999999999999999999986542 1348899999999999999999999999999999999999999
Q ss_pred CCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHH
Q 002321 827 GEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVT 905 (936)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~ 905 (936)
+.+||+|||+++...............+++.|+|||++. +..++.++|||||||++|||++ |+.||............
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~ 318 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 318 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH-TCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhc-CCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999999998765444333344456778999999884 4578999999999999999999 99999887654333221
Q ss_pred HH-----HHHhhhccccceeecccccccccccccC
Q 002321 906 WL-----EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 906 ~~-----~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.. .+...+..+.+++.+||..||.+||+++
T Consensus 319 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ 353 (370)
T 2psq_A 319 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 353 (370)
T ss_dssp HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 11 1122345788899999999999999874
No 57
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=9.4e-39 Score=360.90 Aligned_cols=336 Identities=19% Similarity=0.214 Sum_probs=196.8
Q ss_pred cCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEE
Q 002321 123 LQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTL 202 (936)
Q Consensus 123 l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 202 (936)
+++|++|++++|.++ .+|..+|..+++|++|+|++|+|++..+..|+.+++|++|+|++|++++..|..|.++++|++|
T Consensus 44 l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 556677777777766 5676667777777777777777766666667777777777777777776666667777777777
Q ss_pred ecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCcccc
Q 002321 203 DLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFS 282 (936)
Q Consensus 203 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 282 (936)
+|++|+++...+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------------- 181 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--------------------- 181 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---------------------
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---------------------
Confidence 77777777444444566777777777777776666666666666666666666655221
Q ss_pred CCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhh
Q 002321 283 GEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIF 362 (936)
Q Consensus 283 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 362 (936)
+..+++|+.|++++|.+++. ...++|+.|++++|.++.. |.
T Consensus 182 ------~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~--------------------------- 222 (390)
T 3o6n_A 182 ------LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RG--------------------------- 222 (390)
T ss_dssp ------GGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-EC---------------------------
T ss_pred ------cccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-cc---------------------------
Confidence 22334444455555444321 1112333444444333311 00
Q ss_pred ccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccC
Q 002321 363 SSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKAL 442 (936)
Q Consensus 363 ~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 442 (936)
..+++|+.|++++|++++. ..+..+++|++|+|++|++++..|..|..+++|
T Consensus 223 --------------------------~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (390)
T 3o6n_A 223 --------------------------PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 274 (390)
T ss_dssp --------------------------CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred --------------------------cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccC
Confidence 0123566666666666543 345555566666666666555555555555555
Q ss_pred CeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCC
Q 002321 443 NVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFN 522 (936)
Q Consensus 443 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 522 (936)
++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|
T Consensus 275 ~~L~L~~n~l~~-------------------------~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N 328 (390)
T 3o6n_A 275 ERLYISNNRLVA-------------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHN 328 (390)
T ss_dssp CEEECCSSCCCE-------------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSS
T ss_pred CEEECCCCcCcc-------------------------cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCC
Confidence 555555555543 3333344555555555555555 34445556666666666666
Q ss_pred cccCCCCcccccccccCeeecCCCcccccCCCCCccCcCCCccccCCCCCCCCCC
Q 002321 523 SLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 523 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~~c~~~~ 577 (936)
++++ +| +..+++|+.|++++|++.+... ...+..+....+.+++..|..+.
T Consensus 329 ~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 329 SIVT-LK--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp CCCC-CC--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCSCCCTTC
T ss_pred ccce-eC--chhhccCCEEEcCCCCccchhH-HHHHHHHHhhcccccCceecccc
Confidence 6653 22 5556677777777777766432 23455566666778888887544
No 58
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.6e-40 Score=359.64 Aligned_cols=243 Identities=23% Similarity=0.326 Sum_probs=200.4
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..+.||+|+||+||+|++. +++.||||++.........+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 34677889999999999999977 68999999997655444457789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++|+|.+++..... +++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.+........
T Consensus 87 ~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 87 CSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp CTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 999999999976433 89999999999999999999999999999999999999999999999999987644333333
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHH-------Hhhhccccceee
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEE-------HWKKAEWRNVSM 921 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 921 (936)
.....||+.|+|||++.+...++.++||||+||++|||++|+.||............+... ...+..+.+++.
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 243 (323)
T 3tki_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243 (323)
T ss_dssp BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHH
T ss_pred cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHH
Confidence 4456789999999998655555889999999999999999999998766533322222211 223456778999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+++
T Consensus 244 ~~L~~dP~~R~t~~ 257 (323)
T 3tki_A 244 KILVENPSARITIP 257 (323)
T ss_dssp HHSCSSTTTSCCHH
T ss_pred HHccCChhhCcCHH
Confidence 99999999999863
No 59
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=373.89 Aligned_cols=348 Identities=18% Similarity=0.175 Sum_probs=213.1
Q ss_pred cccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccc
Q 002321 176 ATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSEN 255 (936)
Q Consensus 176 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 255 (936)
+.++.++++++. +|..+ .++|++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFVA-VPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCSS-CCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-CCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 467777777774 45444 357788888888888777777888888888888888888777778888888888888888
Q ss_pred ccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCCh
Q 002321 256 SFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPD 335 (936)
Q Consensus 256 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 335 (936)
++++..+..|.++++|+.|+|++|.+++..+..|..+++|++|+|++|++++..+..|.++++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 87766666667777777777777777766666667777777777777777666666666667777777777766655555
Q ss_pred hhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhccc
Q 002321 336 SMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGAL 415 (936)
Q Consensus 336 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 415 (936)
.|..+++|+.|++++|.+.+..+ ..+..+++|++|++++|.+.+.++......
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~---------------------------~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 223 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRD---------------------------YSFKRLYRLKVLEISHWPYLDTMTPNCLYG 223 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECT---------------------------TCSCSCTTCCEEEEECCTTCCEECTTTTTT
T ss_pred HhcccCCCcEEeCCCCcCcEeCh---------------------------hhcccCcccceeeCCCCccccccCcccccC
Confidence 56666666666666665542111 112334555555555555444444333333
Q ss_pred ccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccc
Q 002321 416 SGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLIL 495 (936)
Q Consensus 416 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 495 (936)
.+|++|+|++|++++..+..+ ..+++|+.|+|++|.+++..+..|.++++|++|+|
T Consensus 224 ~~L~~L~l~~n~l~~~~~~~~------------------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (477)
T 2id5_A 224 LNLTSLSITHCNLTAVPYLAV------------------------RHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQL 279 (477)
T ss_dssp CCCSEEEEESSCCCSCCHHHH------------------------TTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEEC
T ss_pred ccccEEECcCCcccccCHHHh------------------------cCccccCeeECCCCcCCccChhhccccccCCEEEC
Confidence 345555555554443322344 44455555555555555444445555555555555
Q ss_pred cCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCCCccCcCCCccccCCCCCCCC
Q 002321 496 SKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNTISPSSVLGNPSLCGS 575 (936)
Q Consensus 496 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~~c~~ 575 (936)
++|++++..|..|..+++|++|+|++|+|++..+..+..+++|++|+|++|++.+.++..+++.......+.++...|..
T Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~ 359 (477)
T 2id5_A 280 VGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCAT 359 (477)
T ss_dssp CSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEE
T ss_pred CCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCC
Confidence 55555555555555555566666666665544444555556666666666666655544444444444445566666655
Q ss_pred CC
Q 002321 576 AV 577 (936)
Q Consensus 576 ~~ 577 (936)
|.
T Consensus 360 p~ 361 (477)
T 2id5_A 360 PE 361 (477)
T ss_dssp SG
T ss_pred ch
Confidence 54
No 60
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.1e-39 Score=353.52 Aligned_cols=237 Identities=22% Similarity=0.281 Sum_probs=199.4
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||+||+|+.+ +|+.||||+++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 45677889999999999999976 589999999965432 233567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++.+... +++.++..++.|++.||+|||++||+||||||+||+++.+|.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-- 159 (337)
T ss_dssp ECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--
T ss_pred eCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--
Confidence 99999999999986543 8999999999999999999999999999999999999999999999999997542211
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 922 (936)
.......||+.|+|||++. +..++.++||||+||++|||++|+.||...+.......... .+...+.++++++.+
T Consensus 160 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 238 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238 (337)
T ss_dssp CCBCCCEECGGGCCGGGGS-SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred CcccccccChhhCChhhhc-CCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 2234567899999999984 55789999999999999999999999988765433322111 123345778999999
Q ss_pred cccccccccc
Q 002321 923 SCKGSSRQRR 932 (936)
Q Consensus 923 ~l~~~p~~Rp 932 (936)
||..||.+||
T Consensus 239 lL~~dP~~R~ 248 (337)
T 1o6l_A 239 LLKKDPKQRL 248 (337)
T ss_dssp HTCSSTTTST
T ss_pred HhhcCHHHhc
Confidence 9999999998
No 61
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=358.54 Aligned_cols=239 Identities=23% Similarity=0.293 Sum_probs=197.9
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (936)
..|+..+.||+|+||+||+|+.+ +|+.||||+++.... ....+.+.+|.++++.+ +||||+++++++.+....++|
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 34677889999999999999976 589999999975432 23356788999999998 799999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++|+|.+++.+... +++.++..++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 103 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-- 177 (353)
T 3txo_A 103 MEFVNGGDLMFHIQKSRR---FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-- 177 (353)
T ss_dssp EECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred EeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC--
Confidence 999999999999987543 899999999999999999999999999999999999999999999999999754321
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceee
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSM 921 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 921 (936)
........||+.|+|||++ .+..++.++||||+||++|||++|+.||...+......... ..+.+.+..+.+++.
T Consensus 178 ~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~ 256 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEIL-QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILK 256 (353)
T ss_dssp --------CCGGGCCHHHH-HHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CccccccCCCcCeEChhhc-CCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 2233456799999999988 45578999999999999999999999998876643332211 113445677899999
Q ss_pred ccccccccccccc
Q 002321 922 RSCKGSSRQRRRF 934 (936)
Q Consensus 922 ~~l~~~p~~Rp~f 934 (936)
+||..||.+||+.
T Consensus 257 ~lL~~dP~~R~~~ 269 (353)
T 3txo_A 257 SFMTKNPTMRLGS 269 (353)
T ss_dssp HHTCSSGGGSTTS
T ss_pred HHhhhCHHHccCC
Confidence 9999999999986
No 62
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.4e-40 Score=367.48 Aligned_cols=244 Identities=22% Similarity=0.280 Sum_probs=200.6
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||+||+|++. +++.||||+++........+++.+|++++++++||||+++++++.+....++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 445677889999999999999987 6899999999755433445678899999999999999999999999889999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++|+|.++++... ..+++.++..++.|+++||+|||+++|+||||||+|||++.++.+||+|||+++.........
T Consensus 193 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp CCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 999999999997643 238999999999999999999999999999999999999999999999999998654322222
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceee
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSM 921 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 921 (936)
......+++.|+|||.+. ...++.++|||||||++|||++ |+.||...+......... ..+...++.+.+++.
T Consensus 271 ~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 349 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALN-YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLME 349 (377)
T ss_dssp CSSCCEEEGGGSCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred cCCCCCCCcCcCCHhHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 222233567899999884 4468999999999999999998 999998876543221111 012234567889999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+|+
T Consensus 350 ~cl~~dP~~Rps~~ 363 (377)
T 3cbl_A 350 QCWAYEPGQRPSFS 363 (377)
T ss_dssp HHTCSSGGGSCCHH
T ss_pred HHcCCCchhCcCHH
Confidence 99999999999985
No 63
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-39 Score=352.90 Aligned_cols=243 Identities=28% Similarity=0.402 Sum_probs=193.9
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||+||+|++ +|+.||||++...... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 44577888999999999999987 4889999999765433 335678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSN--IIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|+++|+|.+++........+++..++.++.|++.||+|||++| |+||||||+||+++.++.+||+|||+++.....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-- 192 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST-- 192 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc--
Confidence 9999999999986543334899999999999999999999999 999999999999999999999999999754322
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH------HHHhhhccccce
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL------EEHWKKAEWRNV 919 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~~ 919 (936)
........+|+.|+|||++. +..++.++||||+||++|||++|+.||...+.......... .+...++.+.++
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 271 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLR-DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271 (309)
T ss_dssp ---------CCTTSCHHHHT-TCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHH
T ss_pred ccccccCCCCccccChhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHH
Confidence 12234456899999999984 55689999999999999999999999988766433322110 012344678899
Q ss_pred eecccccccccccccC
Q 002321 920 SMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 920 ~~~~l~~~p~~Rp~f~ 935 (936)
+.+||..||.+||+++
T Consensus 272 i~~~l~~dP~~Rps~~ 287 (309)
T 3p86_A 272 IEGCWTNEPWKRPSFA 287 (309)
T ss_dssp HHHHTCSSGGGSCCHH
T ss_pred HHHHccCChhhCcCHH
Confidence 9999999999999874
No 64
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.9e-39 Score=355.28 Aligned_cols=239 Identities=24% Similarity=0.294 Sum_probs=200.7
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-----hHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-----SQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
...|+..+.||+|+||.||+|+.+ +|+.||||+++...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 345778889999999999999976 58999999997654321 357899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC----CeEEeeccCcc
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG----EPKVGDYGLAR 838 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a~ 838 (936)
++||||+++|+|.+++.... .+++.++..++.|++.||+|||+.||+||||||+||+++.++ .+||+|||+++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999999997643 389999999999999999999999999999999999998877 79999999998
Q ss_pred ccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH--------HHHH
Q 002321 839 LLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW--------LEEH 910 (936)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~--------~~~~ 910 (936)
...... ......||+.|+|||++ ....++.++||||+||++|+|++|..||............. ....
T Consensus 168 ~~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (361)
T 2yab_A 168 EIEDGV---EFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243 (361)
T ss_dssp ECCTTC---CCCCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred EcCCCC---ccccCCCCccEECchHH-cCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhcc
Confidence 764322 22445689999999998 45578999999999999999999999998866533221110 1112
Q ss_pred hhhccccceeeccccccccccccc
Q 002321 911 WKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 911 ~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
..++.+++++.+||..||.+||+.
T Consensus 244 ~~s~~~~~li~~~L~~dP~~R~t~ 267 (361)
T 2yab_A 244 QTSELAKDFIRKLLVKETRKRLTI 267 (361)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred CCCHHHHHHHHHHCCCChhHCcCH
Confidence 345678999999999999999985
No 65
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.5e-39 Score=354.22 Aligned_cols=240 Identities=22% Similarity=0.333 Sum_probs=201.0
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (936)
..|+..+.||+|+||.||+|+.+ +|+.||||+++.... ....+.+.+|..++..+ +||||+++++++.+....++|
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv 96 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence 44677789999999999999986 589999999975432 23356788899999887 999999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++|+|.+++..... +++.++..++.|++.||+|||++||+||||||+||+++.+|.+||+|||+++......
T Consensus 97 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 172 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD- 172 (345)
T ss_dssp EECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred EeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-
Confidence 999999999999987543 8999999999999999999999999999999999999999999999999997543211
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceee
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSM 921 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 921 (936)
.......||+.|+|||++. +..++.++||||+||++|||++|+.||...+......... ..+.+.+..+++++.
T Consensus 173 -~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 250 (345)
T 1xjd_A 173 -AKTNTFCGTPDYIAPEILL-GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLV 250 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred -CcccCCCCCcccCChhhhc-CCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHHHH
Confidence 2234567899999999984 4578999999999999999999999998876543332111 112345577889999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+.+
T Consensus 251 ~lL~~dp~~R~~~~ 264 (345)
T 1xjd_A 251 KLFVREPEKRLGVR 264 (345)
T ss_dssp HHSCSSGGGSBTTB
T ss_pred HHhcCCHhHcCCCh
Confidence 99999999999874
No 66
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=348.72 Aligned_cols=243 Identities=24% Similarity=0.391 Sum_probs=199.5
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|...+.||+|+||+||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 345677889999999999999986 58999999885432 3446789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++|+|.++++.... .+++.++..++.|+++||+|||+++|+||||||+||+++.++.+||+|||+++.........
T Consensus 88 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CCTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999987432 38999999999999999999999999999999999999999999999999998764322111
Q ss_pred ------------ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH----HHHHHHH---
Q 002321 848 ------------LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW----FSVTWLE--- 908 (936)
Q Consensus 848 ------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~----~~~~~~~--- 908 (936)
......||+.|+|||.+ .+..++.++||||+||++|||++|..||........ .......
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC 244 (310)
T ss_dssp --------------CCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC
T ss_pred cccccccccccccccccCCCcceeCHHHh-cCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC
Confidence 11145689999999998 455789999999999999999999999976432111 1111111
Q ss_pred HHhhhccccceeecccccccccccccC
Q 002321 909 EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+...++.+.+++.+||..||.+||+++
T Consensus 245 ~~~~~~~l~~li~~~l~~dP~~Rps~~ 271 (310)
T 3s95_A 245 PPNCPPSFFPITVRCCDLDPEKRPSFV 271 (310)
T ss_dssp CTTCCTTHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHH
Confidence 234557899999999999999999974
No 67
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.1e-38 Score=372.72 Aligned_cols=336 Identities=20% Similarity=0.216 Sum_probs=207.8
Q ss_pred cCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEE
Q 002321 123 LQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTL 202 (936)
Q Consensus 123 l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 202 (936)
+++++.|++++|.+. .+|..+|..+++|++|+|++|.|++..|..|+.+++|++|+|++|.|++..|..|+++++|++|
T Consensus 50 l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 556777777777776 6777777777777777777777777667777777777777777777777777777777777777
Q ss_pred ecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCcccc
Q 002321 203 DLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFS 282 (936)
Q Consensus 203 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 282 (936)
+|++|.|++..+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------------- 187 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--------------------- 187 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---------------------
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---------------------
Confidence 77777777555555677777777777777777666666666777777776666665321
Q ss_pred CCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhh
Q 002321 283 GEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIF 362 (936)
Q Consensus 283 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 362 (936)
++.+++|+.|++++|.+++. ....+ |+.|++++|.+....+
T Consensus 188 ------~~~l~~L~~L~l~~n~l~~l-----~~~~~------------------------L~~L~ls~n~l~~~~~---- 228 (597)
T 3oja_B 188 ------LSLIPSLFHANVSYNLLSTL-----AIPIA------------------------VEELDASHNSINVVRG---- 228 (597)
T ss_dssp ------GGGCTTCSEEECCSSCCSEE-----ECCTT------------------------CSEEECCSSCCCEEEC----
T ss_pred ------hhhhhhhhhhhcccCccccc-----cCCch------------------------hheeeccCCccccccc----
Confidence 12234445555555544421 11123 3444444443321000
Q ss_pred ccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccC
Q 002321 363 SSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKAL 442 (936)
Q Consensus 363 ~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 442 (936)
. ..++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..|+.+++|
T Consensus 229 --------------------~------~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 280 (597)
T 3oja_B 229 --------------------P------VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 280 (597)
T ss_dssp --------------------S------CCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred --------------------c------cCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCC
Confidence 0 013466666666666542 445555555555555555555555555555555
Q ss_pred CeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCC
Q 002321 443 NVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFN 522 (936)
Q Consensus 443 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 522 (936)
+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|
T Consensus 281 ~~L~Ls~N~l~~-------------------------l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N 334 (597)
T 3oja_B 281 ERLYISNNRLVA-------------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHN 334 (597)
T ss_dssp CEEECTTSCCCE-------------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSS
T ss_pred CEEECCCCCCCC-------------------------CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCC
Confidence 555555555543 3444445556666666666665 45556666677777777777
Q ss_pred cccCCCCcccccccccCeeecCCCcccccCCCCCccCcCCCccccCCCCCCCCCC
Q 002321 523 SLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 523 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~~c~~~~ 577 (936)
+|++. | +..+++|+.|+|++|++.|..+ ...+..+....+.+++..|+.+.
T Consensus 335 ~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 335 SIVTL-K--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp CCCCC-C--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCCCCCTTC
T ss_pred CCCCc-C--hhhcCCCCEEEeeCCCCCChhH-HHHHHHHhhhccccccccCCcch
Confidence 77633 2 5566778888888888877643 34566677777889999998643
No 68
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=352.32 Aligned_cols=244 Identities=25% Similarity=0.357 Sum_probs=199.1
Q ss_pred cccccCCCcccccCceEEEEEEeC----CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR----DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
...|+..+.||+|+||.||+|++. .+..||||+++........+.+.+|+.++++++||||+++++++.+....++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 445778889999999999999975 3456999999765545556789999999999999999999999999889999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+++|+|.++++... ..+++.++..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 128 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred EeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 999999999999997543 238999999999999999999999999999999999999999999999999998764322
Q ss_pred c-ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhcccc
Q 002321 845 R-YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWR 917 (936)
Q Consensus 845 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~ 917 (936)
. ........+|+.|+|||++ ....++.++||||+||++|||++ |+.||.............. .+...+..+.
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 284 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAI-AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALH 284 (325)
T ss_dssp -CCEECC---CCGGGSCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred cceeeccCCCCcccccCHhHh-cCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHH
Confidence 2 1122334457789999988 44578999999999999999999 9999988766433322111 0122346788
Q ss_pred ceeecccccccccccccC
Q 002321 918 NVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f~ 935 (936)
+++.+||..||.+||+++
T Consensus 285 ~li~~~l~~dp~~Rps~~ 302 (325)
T 3kul_A 285 QLMLDCWHKDRAQRPRFS 302 (325)
T ss_dssp HHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHccCChhhCcCHH
Confidence 999999999999999874
No 69
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-38 Score=344.53 Aligned_cols=240 Identities=23% Similarity=0.334 Sum_probs=194.8
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (936)
...|+..+.||+|+||.||+|++. +++.||||++...... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 345778889999999999999976 5899999998654332 2357789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++++|.+++..... +++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS- 165 (294)
T ss_dssp EECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc-
Confidence 999999999999987543 8999999999999999999999999999999999999999999999999998664322
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH---------HHHHhhhccc
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW---------LEEHWKKAEW 916 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~---------~~~~~~~~~~ 916 (936)
........||+.|+|||.+. +..++.++||||+||++|||++|+.||............. ..+.-.++.+
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAK-GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244 (294)
T ss_dssp ---------CCSSCCHHHHH-TCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHH
T ss_pred ccccCccccCccccCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHH
Confidence 12233456899999999884 4568999999999999999999999998876543221111 0012234678
Q ss_pred cceeecccccccccccc
Q 002321 917 RNVSMRSCKGSSRQRRR 933 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~ 933 (936)
.+++.+||..||.+||+
T Consensus 245 ~~li~~~l~~dp~~R~~ 261 (294)
T 4eqm_A 245 SNVILRATEKDKANRYK 261 (294)
T ss_dssp HHHHHHHSCSSGGGSCS
T ss_pred HHHHHHHhcCCHhHccc
Confidence 89999999999999983
No 70
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=346.86 Aligned_cols=235 Identities=24% Similarity=0.353 Sum_probs=199.3
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.+ +|+.||||+++..... ...+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 45677889999999999999976 6899999999654321 33567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.+|.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred eCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 99999999999987543 899999999999999999999999999999999999999999999999999865432
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 922 (936)
.....||+.|+|||++ ....++.++||||+||++|||++|+.||...+.......... .+...+.++++++.+
T Consensus 160 --~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~ 236 (318)
T 1fot_A 160 --TYTLCGTPDYIAPEVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSR 236 (318)
T ss_dssp --BCCCCSCTTTCCHHHH-TTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred --cccccCCccccCHhHh-cCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 2345789999999988 455789999999999999999999999988765433221111 123345678999999
Q ss_pred ccccccccccc
Q 002321 923 SCKGSSRQRRR 933 (936)
Q Consensus 923 ~l~~~p~~Rp~ 933 (936)
|+..||.+||.
T Consensus 237 lL~~dp~~R~~ 247 (318)
T 1fot_A 237 LITRDLSQRLG 247 (318)
T ss_dssp HTCSCTTTCTT
T ss_pred HhccCHHHcCC
Confidence 99999999993
No 71
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=359.81 Aligned_cols=246 Identities=23% Similarity=0.310 Sum_probs=202.0
Q ss_pred cccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
...|+..+.||+|+||+||+|++. +++.||||+++..........+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 455777889999999999999953 46789999997654455567899999999999999999999999999899
Q ss_pred EEEEEecCCCChhhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC---CeEEeecc
Q 002321 763 LLIYEFVSGGSLHKHLHEGSG----GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG---EPKVGDYG 835 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg 835 (936)
++||||+++|+|.+++..... ...+++.+++.++.|+++||+|||++||+||||||+|||++.++ .+||+|||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 999999999999999986532 13489999999999999999999999999999999999999655 59999999
Q ss_pred CccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HH
Q 002321 836 LARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EE 909 (936)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~ 909 (936)
+++...............+|+.|+|||++. ...++.++|||||||++|||++ |..||.............. .+
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~ 308 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP 308 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred cccccccccccccCCCcCCcccEECHHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 998654333333344556788999999884 4578999999999999999998 9999988766433322111 11
Q ss_pred HhhhccccceeecccccccccccccC
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...+..+.+++.+||..||.+||+++
T Consensus 309 ~~~~~~l~~li~~~l~~dP~~Rps~~ 334 (367)
T 3l9p_A 309 KNCPGPVYRIMTQCWQHQPEDRPNFA 334 (367)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred ccCCHHHHHHHHHHcCCCHhHCcCHH
Confidence 23446688999999999999999874
No 72
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.8e-38 Score=346.55 Aligned_cols=242 Identities=24% Similarity=0.288 Sum_probs=195.2
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..++||+|+||+||+|++.+|+.||||++...... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 3457888899999999999999988999999999654332 234678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|++ |++.+++..... .+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...... .
T Consensus 100 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 174 (311)
T 3niz_A 100 FME-KDLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV--R 174 (311)
T ss_dssp CCS-EEHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--C
T ss_pred CCC-CCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--c
Confidence 997 588888776432 38999999999999999999999999999999999999999999999999998764322 2
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-H------------------
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-E------------------ 908 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-~------------------ 908 (936)
......+|+.|+|||++.+...++.++||||+||++|||++|+.||.............. .
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 254 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhh
Confidence 223456789999999986666789999999999999999999999987655322211110 0
Q ss_pred ---------------HHhhhccccceeecccccccccccccC
Q 002321 909 ---------------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ---------------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
....++++.+++.+||..||.+||+.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 296 (311)
T 3niz_A 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR 296 (311)
T ss_dssp SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHH
Confidence 000123556899999999999999863
No 73
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=353.60 Aligned_cols=238 Identities=21% Similarity=0.280 Sum_probs=198.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45778889999999999999976 488999999865432 223567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++..... +++..+..++.|++.||+|||+.||+||||||+|||++.+|.+||+|||+++.....
T Consensus 95 e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVH---FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--- 168 (384)
T ss_dssp CCCTTEEHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT---
T ss_pred ecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC---
Confidence 99999999999986543 899999999999999999999999999999999999999999999999999876432
Q ss_pred cccccccCcccccCcccccC--cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH-HHHHHH------HHhhhcccc
Q 002321 847 VLSSKIQSALGYMAPEFACR--TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF-SVTWLE------EHWKKAEWR 917 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~-~~~~~~------~~~~~~~~~ 917 (936)
.......||+.|+|||++.. +..++.++||||+||++|||++|+.||......... ...... +...+..+.
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~ 248 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMV 248 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHH
Confidence 22345679999999998853 345899999999999999999999999765432111 111111 223446788
Q ss_pred ceeecccccccccccc
Q 002321 918 NVSMRSCKGSSRQRRR 933 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~ 933 (936)
+++.+||..||.+||+
T Consensus 249 ~li~~lL~~dP~~R~s 264 (384)
T 4fr4_A 249 SLLKKLLEPNPDQRFS 264 (384)
T ss_dssp HHHHHHSCSSGGGSCC
T ss_pred HHHHHHhcCCHhHhcc
Confidence 9999999999999997
No 74
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-39 Score=355.05 Aligned_cols=239 Identities=22% Similarity=0.321 Sum_probs=198.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|...+.||+|+||.||+|++. +++.||||++...... .....+.+|+.+++.++||||+++++++.+....++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 45778889999999999999974 6899999998643221 22457899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+ +|+|.+++..... +++.++..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKR---MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162 (336)
T ss_dssp CCC-CEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--
T ss_pred ECC-CCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--
Confidence 999 7899998876543 8999999999999999999999999999999999999999999999999998664322
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH----HHHHHHHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF----SVTWLEEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 922 (936)
......||+.|+|||++.+....+.++||||+||++|+|++|+.||.+....... ...+..+...++.+.+++.+
T Consensus 163 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 241 (336)
T 3h4j_B 163 -FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRR 241 (336)
T ss_dssp -TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHT
T ss_pred -ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence 2234568999999999965554588999999999999999999999775432111 11111234456778899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 242 ~L~~dP~~Rpt~~ 254 (336)
T 3h4j_B 242 MIVADPMQRITIQ 254 (336)
T ss_dssp TSCSSGGGSCCHH
T ss_pred HcCCChhHCcCHH
Confidence 9999999999863
No 75
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-38 Score=351.31 Aligned_cols=239 Identities=22% Similarity=0.249 Sum_probs=200.0
Q ss_pred ccccCCCcccccCceEEEEEEeCC-CcEEEEEEeeccCc--cchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRD-GRPVAIKKLTVSSL--VKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (936)
..|+..+.||+|+||.||+|+.+. ++.||||+++.... ....+.+.+|.+++..+ +||+|+++++++.+.+..++|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 456778899999999999999874 78999999975432 23356788999999998 799999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++|+|.+++..... +++.++..++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 100 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 174 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-- 174 (353)
T ss_dssp EECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred EeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC--
Confidence 999999999999987543 899999999999999999999999999999999999999999999999999753221
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccceee
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRNVSM 921 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 921 (936)
........||+.|+|||++. ...++.++||||+||++|||++|+.||...+.......... .+...+.++.+++.
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 253 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 253 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCCccccChhhhc-CCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 12234567899999999984 55789999999999999999999999988765433321111 12334567889999
Q ss_pred ccccccccccccc
Q 002321 922 RSCKGSSRQRRRF 934 (936)
Q Consensus 922 ~~l~~~p~~Rp~f 934 (936)
+||..||.+||++
T Consensus 254 ~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 254 GLMTKHPGKRLGC 266 (353)
T ss_dssp HHTCSCTTSCTTC
T ss_pred HHhhcCHHHcCCC
Confidence 9999999999975
No 76
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=363.06 Aligned_cols=322 Identities=21% Similarity=0.195 Sum_probs=220.2
Q ss_pred CcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecC
Q 002321 126 LRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLS 205 (936)
Q Consensus 126 L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 205 (936)
-+.++.++++++ .+|..+ .++|++|+|++|+|++..+..|..+++|++|+|++|+|+++.|..|.++++|++|+|+
T Consensus 13 ~~~v~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TTEEECCSCCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-cCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 357888888887 677644 2467777777777777667777777777777777777777667777777777777777
Q ss_pred CCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCC
Q 002321 206 DNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEV 285 (936)
Q Consensus 206 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 285 (936)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..
T Consensus 89 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~--------------------- 147 (477)
T 2id5_A 89 SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRA--------------------- 147 (477)
T ss_dssp SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTS---------------------
T ss_pred CCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhh---------------------
Confidence 77777555555666777777777777776666666666666666666666665544444
Q ss_pred CcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccC
Q 002321 286 PKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSG 365 (936)
Q Consensus 286 ~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 365 (936)
|..+++|++|+|++|++++..+..+.++++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.+|...
T Consensus 148 ---~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~---- 220 (477)
T 2id5_A 148 ---FSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNC---- 220 (477)
T ss_dssp ---STTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTT----
T ss_pred ---ccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCccc----
Confidence 4445555555555555554444445555666666666666665555566666666666666666554333321
Q ss_pred CccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCee
Q 002321 366 LNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVL 445 (936)
Q Consensus 366 l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 445 (936)
....+|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|+.|
T Consensus 221 -----------------------~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (477)
T 2id5_A 221 -----------------------LYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEI 277 (477)
T ss_dssp -----------------------TTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEE
T ss_pred -----------------------ccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEE
Confidence 123478899999999987777888999999999999999887777777788888888
Q ss_pred ecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccC
Q 002321 446 DLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTG 502 (936)
Q Consensus 446 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 502 (936)
+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|++..
T Consensus 278 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 278 QLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp ECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred ECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 888888777667777777777777777777775555566666666666666666653
No 77
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-38 Score=339.89 Aligned_cols=240 Identities=25% Similarity=0.362 Sum_probs=200.8
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEec
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFV 769 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (936)
..|+..+.||+|+||.||+|++.+++.||||++..... ..+++.+|++++++++||||+++++++.+....++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc--CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 45677889999999999999998899999999975533 3577999999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccccc
Q 002321 770 SGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLS 849 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 849 (936)
++++|.+++.... ..+++..++.++.|+++||+|||+++|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 88 ~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSS 164 (269)
T ss_dssp TTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHST
T ss_pred CCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc-cccc
Confidence 9999999997643 248999999999999999999999999999999999999999999999999998664322 2223
Q ss_pred ccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceeecc
Q 002321 850 SKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSMRS 923 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 923 (936)
....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||............. ..+...++.+.+++.+|
T Consensus 165 ~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 243 (269)
T 4hcu_A 165 TGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 243 (269)
T ss_dssp TSTTCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred cCcccccccCCHHHh-cCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHH
Confidence 345567789999988 45578999999999999999999 999998876543321111 11223456688899999
Q ss_pred cccccccccccC
Q 002321 924 CKGSSRQRRRFQ 935 (936)
Q Consensus 924 l~~~p~~Rp~f~ 935 (936)
|..||.+||+++
T Consensus 244 l~~~p~~Rps~~ 255 (269)
T 4hcu_A 244 WRERPEDRPAFS 255 (269)
T ss_dssp TCSSGGGSCCHH
T ss_pred ccCCcccCcCHH
Confidence 999999999864
No 78
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-38 Score=345.76 Aligned_cols=237 Identities=23% Similarity=0.279 Sum_probs=198.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..+.||+|+||.||+|+.. +++.||+|+++... .....+.+|++++++++||||+++++++.+....++||||
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 34677788999999999999976 58899999986543 3456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC--CCCeEEeeccCccccCCCccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG--SGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
+++|+|.+++.... ..+++.++..++.|++.||+|||++||+||||||+||+++. ++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-- 158 (321)
T 1tki_A 83 ISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-- 158 (321)
T ss_dssp CCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred CCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--
Confidence 99999999997643 23899999999999999999999999999999999999987 7899999999998764332
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH--------HHHHhhhccccc
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW--------LEEHWKKAEWRN 918 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~ 918 (936)
......+++.|+|||++. ...++.++||||+||++|||++|..||............. ......+.++.+
T Consensus 159 -~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 236 (321)
T 1tki_A 159 -NFRLLFTAPEYYAPEVHQ-HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236 (321)
T ss_dssp -EEEEEESCGGGSCHHHHT-TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred -ccccccCChhhcCcHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence 223456899999999984 4468999999999999999999999998866533221111 011234567889
Q ss_pred eeeccccccccccccc
Q 002321 919 VSMRSCKGSSRQRRRF 934 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f 934 (936)
++.+||..||.+||+.
T Consensus 237 li~~~L~~dp~~Rpt~ 252 (321)
T 1tki_A 237 FVDRLLVKERKSRMTA 252 (321)
T ss_dssp HHHTTSCSSGGGSCCH
T ss_pred HHHHHcCCChhHCcCH
Confidence 9999999999999985
No 79
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.4e-38 Score=351.27 Aligned_cols=239 Identities=23% Similarity=0.359 Sum_probs=199.2
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
...|+..+.||+|+||.||+|+.+ +|+.||||++...... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 345788889999999999999976 5899999999765433 33567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC---CeEEeeccCccccCCC
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG---EPKVGDYGLARLLPML 843 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~ 843 (936)
||+++|+|.+++.... .+++.++..++.|++.||+|||++||+||||||+||+++.++ .+||+|||+++.....
T Consensus 108 e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999999887643 389999999999999999999999999999999999998654 5999999999866432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH------HHH--hhhcc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL------EEH--WKKAE 915 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~------~~~--~~~~~ 915 (936)
. ......||+.|+|||++. ...++.++||||+||++|||++|+.||...+.......... .+. ..+..
T Consensus 185 ~---~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 260 (362)
T 2bdw_A 185 E---AWHGFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 260 (362)
T ss_dssp C---SCCCSCSCTTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHH
T ss_pred c---ccccCCCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHH
Confidence 2 223467899999999984 55789999999999999999999999988765433221110 111 23467
Q ss_pred ccceeeccccccccccccc
Q 002321 916 WRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f 934 (936)
+++++.+||..||.+||+.
T Consensus 261 ~~~li~~~L~~dP~~R~t~ 279 (362)
T 2bdw_A 261 AKSLIDSMLTVNPKKRITA 279 (362)
T ss_dssp HHHHHHHHSCSSGGGSCCH
T ss_pred HHHHHHHHcCCChhhCcCH
Confidence 8899999999999999985
No 80
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=345.34 Aligned_cols=239 Identities=25% Similarity=0.330 Sum_probs=199.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-----chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-----KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQL 763 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (936)
..|+..+.||+|+||.||+|+.. +|+.||||+++..... ...+.+.+|+.++++++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45778889999999999999976 5899999999654332 13678999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC----CeEEeeccCccc
Q 002321 764 LIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG----EPKVGDYGLARL 839 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a~~ 839 (936)
+||||+++|+|.+++.... .+++.++..++.|++.||+|||+.+|+||||||+||+++.++ .+||+|||+++.
T Consensus 91 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999999997643 389999999999999999999999999999999999999887 899999999987
Q ss_pred cCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHH-HHH-------HHHHh
Q 002321 840 LPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFS-VTW-------LEEHW 911 (936)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~-~~~-------~~~~~ 911 (936)
..... ......+|+.|+|||++ ....++.++||||+||++|||++|+.||.......... ... .....
T Consensus 168 ~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (326)
T 2y0a_A 168 IDFGN---EFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243 (326)
T ss_dssp CCTTS---CCCCCCSCTTTCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTT
T ss_pred CCCCC---ccccccCCcCcCCceee-cCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCcccccc
Confidence 64322 22345689999999988 45578999999999999999999999998765432221 110 11123
Q ss_pred hhccccceeecccccccccccccC
Q 002321 912 KKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 912 ~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+..+++++.+||..||.+||+++
T Consensus 244 ~~~~~~~li~~~L~~dP~~Rpt~~ 267 (326)
T 2y0a_A 244 TSALAKDFIRRLLVKDPKKRMTIQ 267 (326)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCHHHHHHHHHHccCChhhCCCHH
Confidence 456788999999999999999863
No 81
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=9.1e-39 Score=357.46 Aligned_cols=244 Identities=24% Similarity=0.351 Sum_probs=188.9
Q ss_pred cccccCCCcccccCceEEEEEEeC----CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR----DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
...|+..+.||+|+||.||+|++. ++..||||+++........+++.+|+.++++++||||+++++++.+....++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 345788889999999999999875 4778999999765444556789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+++|+|.++++... ..+++.+++.++.|+++||+|||+++|+||||||+||+++.++.+||+|||+++......
T Consensus 124 v~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 999999999999997643 238999999999999999999999999999999999999999999999999998764322
Q ss_pred cc-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhcccc
Q 002321 845 RY-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWR 917 (936)
Q Consensus 845 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~ 917 (936)
.. .......+++.|+|||++ ....++.++|||||||++|||++ |+.||.............. .+...+..+.
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 280 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY 280 (373)
T ss_dssp ------------CTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHH
T ss_pred ccceeccCCCcCCCccChhhh-ccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHH
Confidence 11 112223356789999988 45578999999999999999998 9999987665432211110 0122346688
Q ss_pred ceeecccccccccccccC
Q 002321 918 NVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f~ 935 (936)
+++.+||..||.+||+++
T Consensus 281 ~li~~cl~~dp~~RPs~~ 298 (373)
T 2qol_A 281 QLMLDCWQKDRNNRPKFE 298 (373)
T ss_dssp HHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHhCcChhhCcCHH
Confidence 999999999999999874
No 82
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.1e-38 Score=346.20 Aligned_cols=236 Identities=23% Similarity=0.322 Sum_probs=197.8
Q ss_pred ccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEecC
Q 002321 692 LNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFVS 770 (936)
Q Consensus 692 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (936)
++..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++......++||||++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 125 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ 125 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence 455668999999999999987 69999999997543 2346778999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccccc
Q 002321 771 GGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLSS 850 (936)
Q Consensus 771 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 850 (936)
+|+|.+++.... +++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++...... ....
T Consensus 126 ~~~L~~~l~~~~----l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 199 (321)
T 2c30_A 126 GGALTDIVSQVR----LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRK 199 (321)
T ss_dssp SCBHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCBC
T ss_pred CCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc--cccc
Confidence 999999987532 8999999999999999999999999999999999999999999999999998764322 1234
Q ss_pred cccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhccccceeecc
Q 002321 851 KIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAEWRNVSMRS 923 (936)
Q Consensus 851 ~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 923 (936)
...||+.|+|||++ ....++.++||||+||++|||++|+.||............... ....+..+++++.+|
T Consensus 200 ~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 278 (321)
T 2c30_A 200 SLVGTPYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERM 278 (321)
T ss_dssp CCCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHH
T ss_pred cccCCccccCHhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHH
Confidence 55789999999998 4557899999999999999999999999876653322111100 112345678999999
Q ss_pred cccccccccccC
Q 002321 924 CKGSSRQRRRFQ 935 (936)
Q Consensus 924 l~~~p~~Rp~f~ 935 (936)
|..||.+||+++
T Consensus 279 l~~dp~~Rps~~ 290 (321)
T 2c30_A 279 LVRDPQERATAQ 290 (321)
T ss_dssp SCSSTTTSCCHH
T ss_pred ccCChhhCcCHH
Confidence 999999999863
No 83
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.9e-38 Score=346.05 Aligned_cols=242 Identities=22% Similarity=0.284 Sum_probs=187.0
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..++||+|+||.||+|+.+ +|+.||||+++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 35678889999999999999976 58999999997665444457788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 769 VSGGSLHKHLHEGS---GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 769 ~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
++ |+|.+++.... ....+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV- 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC-
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc-
Confidence 97 69999886532 12348899999999999999999999999999999999999999999999999998764322
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-----------------
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE----------------- 908 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~----------------- 908 (936)
.......+|+.|+|||++.+...++.++||||+||++|||++|+.||...............
T Consensus 163 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 163 -NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp -CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred -ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence 12234567899999999866567899999999999999999999999876653322111100
Q ss_pred ---------------------HHhhhccccceeeccccccccccccc
Q 002321 909 ---------------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 909 ---------------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+...+..+.+++.+||..||.+||+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 288 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA 288 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCH
Confidence 00123457789999999999999985
No 84
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.1e-38 Score=352.00 Aligned_cols=244 Identities=22% Similarity=0.321 Sum_probs=199.2
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc----cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL----VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQL 763 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (936)
...|+..+.||+|+||.||+|+.+ +++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 345788889999999999999976 589999999864321 123578999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC---eEEeeccCccc
Q 002321 764 LIYEFVSGGSLHKHLHEGS-GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE---PKVGDYGLARL 839 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~ 839 (936)
+||||+++|+|.+++.... ....+++..+..++.|++.||+|||+++|+||||||+||+++.++. +||+|||+++.
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 9999999999988776432 2334899999999999999999999999999999999999987654 99999999987
Q ss_pred cCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH-----HHH--Hhh
Q 002321 840 LPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW-----LEE--HWK 912 (936)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~-----~~~--~~~ 912 (936)
..... .......+|+.|+|||++. ...++.++||||+||++|||++|+.||............. ..+ ...
T Consensus 183 ~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (351)
T 3c0i_A 183 LGESG--LVAGGRVGTPHFMAPEVVK-REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 259 (351)
T ss_dssp CCTTS--CBCCCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTS
T ss_pred ecCCC--eeecCCcCCcCccCHHHHc-CCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccC
Confidence 64322 2233457899999999984 4568999999999999999999999998765432221111 011 224
Q ss_pred hccccceeecccccccccccccC
Q 002321 913 KAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 913 ~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
++.+++++.+||..||.+||+++
T Consensus 260 s~~~~~li~~~L~~dP~~R~s~~ 282 (351)
T 3c0i_A 260 SESAKDLVRRMLMLDPAERITVY 282 (351)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CHHHHHHHHHHCCCChhHCcCHH
Confidence 57789999999999999999863
No 85
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.9e-38 Score=342.56 Aligned_cols=240 Identities=22% Similarity=0.271 Sum_probs=192.8
Q ss_pred cccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEec
Q 002321 691 LLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFV 769 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (936)
.|+..+.||+|+||+||+|+..+|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (288)
T 1ob3_A 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL 82 (288)
T ss_dssp SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred cchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEec
Confidence 35677889999999999999988999999999655432 22467889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccccc
Q 002321 770 SGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLS 849 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 849 (936)
+ ++|.+++..... .+++.++..++.|+++||+|||++||+||||||+||+++.++.+||+|||+++...... ...
T Consensus 83 ~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 157 (288)
T 1ob3_A 83 D-QDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RKY 157 (288)
T ss_dssp S-EEHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred C-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--ccc
Confidence 7 599998876432 38999999999999999999999999999999999999999999999999998654221 122
Q ss_pred ccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-H-------------------
Q 002321 850 SKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-E------------------- 909 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-~------------------- 909 (936)
....+|+.|+|||++.+...++.++||||+||++|||++|+.||............... .
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence 34467899999999866667899999999999999999999999886653222111100 0
Q ss_pred -------------HhhhccccceeecccccccccccccC
Q 002321 910 -------------HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 -------------~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...++.+.+++.+||..||.+||+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 276 (288)
T 1ob3_A 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK 276 (288)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHH
Confidence 00123445789999999999999853
No 86
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.8e-38 Score=353.81 Aligned_cols=240 Identities=22% Similarity=0.279 Sum_probs=196.5
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (936)
...|+..+.||+|+||+||+|+.+ +++.||||+++..... ...+.+.+|..++.++ +||||+++++++.+....++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 345778889999999999999977 4789999999765332 2235678899999887 89999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+++|+|.+++.+... +++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~- 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP- 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-
T ss_pred EEEcCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC-
Confidence 9999999999999987543 899999999999999999999999999999999999999999999999999753221
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccch---------hHHHHHHH----HHHHh
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKM---------MWWFSVTW----LEEHW 911 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~---------~~~~~~~~----~~~~~ 911 (936)
........||+.|+|||++. +..++.++||||+||++|||++|+.||..... ........ ..+..
T Consensus 207 -~~~~~~~~gt~~Y~aPE~l~-~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 207 -GDTTSTFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp -TCCBCCCCBCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred -CCccccccCCcccCCchhhc-CCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 12334567999999999984 55789999999999999999999999964321 10111100 01223
Q ss_pred hhccccceeeccccccccccccc
Q 002321 912 KKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 912 ~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.+..+++++.+||..||.+||+.
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCHHHHHHHHHHhcCCHhHcCCC
Confidence 45678899999999999999974
No 87
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1e-38 Score=352.35 Aligned_cols=245 Identities=20% Similarity=0.268 Sum_probs=195.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC--------
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS-------- 760 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 760 (936)
..|+..+.||+|+||.||+|+++ +|+.||||+++........+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 34677889999999999999987 699999999976655556788999999999999999999999986543
Q ss_pred -------------------------------------------------eeEEEEEecCCCChhhhhhccCCCCCCCHHH
Q 002321 761 -------------------------------------------------LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNE 791 (936)
Q Consensus 761 -------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 791 (936)
..++||||+++|+|.+++.........++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 2789999999999999998766555577788
Q ss_pred HHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc----------ccccccccCcccccCc
Q 002321 792 RFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR----------YVLSSKIQSALGYMAP 861 (936)
Q Consensus 792 ~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~~~~~~~y~aP 861 (936)
+++++.|++.||+|||++||+||||||+||+++.++.+||+|||+++....... ........+|+.|+||
T Consensus 166 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 999999999999999999999999999999999999999999999987654321 1222345689999999
Q ss_pred ccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH---HHHHhhhccccceeecccccccccccccC
Q 002321 862 EFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW---LEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 862 E~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
|.+. +..++.++||||+||++|||++|..|+............. .......+.+.+++.+||..||.+||+++
T Consensus 246 E~~~-~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 321 (332)
T 3qd2_B 246 EQIH-GNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEAT 321 (332)
T ss_dssp HHHH-CCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHH
T ss_pred HHhc-CCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHH
Confidence 9984 4578999999999999999999988764432211111100 01122335668899999999999999863
No 88
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.1e-38 Score=345.70 Aligned_cols=244 Identities=32% Similarity=0.546 Sum_probs=200.8
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEec
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFV 769 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (936)
..|+..+.||+|+||.||+|++++++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117 (321)
T ss_dssp CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECC
T ss_pred hccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcC
Confidence 4578888999999999999998889999999986543 234678999999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 770 SGGSLHKHLHEGSGG-NFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
++|+|.+++...... ..+++.++.+++.|+++||+|||++||+||||||+||+++.++.+||+|||+++..........
T Consensus 118 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp TTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred CCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 999999999765422 2489999999999999999999999999999999999999999999999999987654333333
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH-HHHHHHH-------------------
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW-FSVTWLE------------------- 908 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~-~~~~~~~------------------- 908 (936)
.....+++.|+|||++. ...++.++||||+||++|||++|+.||........ ....+..
T Consensus 198 ~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFI-KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276 (321)
T ss_dssp BCCCEEETTTCCHHHHH-HCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTC
T ss_pred ccccCCCccccCHHHhc-CCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccc
Confidence 44556889999999884 44689999999999999999999999976533111 1111110
Q ss_pred -HHhhhccccceeecccccccccccccC
Q 002321 909 -EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 -~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+......+.+++.+||..||.+||+++
T Consensus 277 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ 304 (321)
T 2qkw_B 277 IRPESLRKFGDTAVKCLALSSEDRPSMG 304 (321)
T ss_dssp SCHHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCHHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 011234567788899999999999864
No 89
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.8e-38 Score=349.81 Aligned_cols=235 Identities=22% Similarity=0.274 Sum_probs=199.9
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.+ +|+.||||++..... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 45677889999999999999976 589999999965432 133567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++.+... +++.++..++.|++.||+|||++||+||||||+||+++.+|.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred cCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC---
Confidence 99999999999987543 899999999999999999999999999999999999999999999999999866432
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 922 (936)
.....||+.|+|||++. +..++.++||||+||++|||++|+.||...+.......... .+...+..+++++.+
T Consensus 195 --~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~ 271 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271 (350)
T ss_dssp --BCCCEECGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHH
T ss_pred --cccccCCccccCHHHhc-CCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 23457899999999984 45789999999999999999999999988765433221111 123345778999999
Q ss_pred ccccccccccc
Q 002321 923 SCKGSSRQRRR 933 (936)
Q Consensus 923 ~l~~~p~~Rp~ 933 (936)
||..||.+||+
T Consensus 272 lL~~dp~~R~~ 282 (350)
T 1rdq_E 272 LLQVDLTKRFG 282 (350)
T ss_dssp HSCSCTTTCTT
T ss_pred HhhcCHHhccC
Confidence 99999999997
No 90
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.3e-38 Score=346.88 Aligned_cols=239 Identities=24% Similarity=0.339 Sum_probs=189.9
Q ss_pred ccccCCCcccccCceEEEEEEe----CCCcEEEEEEeeccCcc---chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 690 ALLNKDCELGRGGFGAVYRTVL----RDGRPVAIKKLTVSSLV---KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
..|+..+.||+|+||.||+|+. .+++.||||+++..... .....+.+|+.++++++||||+++++++.+.+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4577888999999999999997 36899999999765322 2345678999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
++||||+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999986543 88999999999999999999999999999999999999999999999999975432
Q ss_pred CccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccc
Q 002321 843 LDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRN 918 (936)
Q Consensus 843 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~ 918 (936)
.. .......|++.|+|||++. ...++.++||||+||++|||++|+.||...+.......... .+...++.+++
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 250 (327)
T 3a62_A 174 DG--TVTHTFCGTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD 250 (327)
T ss_dssp -------CTTSSCCTTSCHHHHT-TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHHH
T ss_pred CC--ccccccCCCcCccCHhhCc-CCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 11 2233457899999999984 45689999999999999999999999987665332211110 12334577899
Q ss_pred eeeccccccccccccc
Q 002321 919 VSMRSCKGSSRQRRRF 934 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f 934 (936)
++.+||..||.+||+.
T Consensus 251 li~~~L~~dp~~R~~~ 266 (327)
T 3a62_A 251 LLKKLLKRNAASRLGA 266 (327)
T ss_dssp HHHHHSCSCGGGSTTS
T ss_pred HHHHHHhcCHhhccCC
Confidence 9999999999999964
No 91
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4e-38 Score=348.06 Aligned_cols=239 Identities=23% Similarity=0.279 Sum_probs=196.9
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (936)
..|+..+.||+|+||.||+|+.+ +++.||||+++..... ...+.+.+|..+++++ +||||+++++++.+....++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 45677889999999999999986 5889999999765432 2346688999999998 899999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++|+|.+++.+... +++..+..++.|++.||+|||++||+||||||+||+++.+|.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~- 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-
T ss_pred EeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC-
Confidence 999999999999987543 8999999999999999999999999999999999999999999999999997543211
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh-------HHHHHHH-HH-----HHhh
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM-------WWFSVTW-LE-----EHWK 912 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~-------~~~~~~~-~~-----~~~~ 912 (936)
.......||+.|+|||++. +..++.++||||+||++|||++|+.||...... ....... .. +...
T Consensus 165 -~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~ 242 (345)
T 3a8x_A 165 -DTTSTFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 242 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTS
T ss_pred -CcccccCCCccccCccccC-CCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCC
Confidence 2234567899999999984 457899999999999999999999999753110 0000111 11 1234
Q ss_pred hccccceeeccccccccccccc
Q 002321 913 KAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 913 ~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+..+++++.+||..||.+||+.
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTC
T ss_pred CHHHHHHHHHHhcCCHhHCCCC
Confidence 5677899999999999999985
No 92
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=347.25 Aligned_cols=244 Identities=25% Similarity=0.290 Sum_probs=199.4
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC--eeEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS--LQLLI 765 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 765 (936)
...|...+.||+|+||+||+|++. +++.||||+++........+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 345778889999999999999987 489999999976655556778899999999999999999999998765 67999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE----cCCCCeEEeeccCccccC
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI----DGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~ 841 (936)
|||+++|+|.+++........+++.++..++.|++.||+|||++||+||||||+||++ +.++.+||+|||+++...
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999999999876554458999999999999999999999999999999999999 788889999999998764
Q ss_pred CCccccccccccCcccccCcccccC-------cccCCchhhHHHHHHHHHHHHcCCCCCCccchh---HHHHHHHHHH--
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACR-------TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM---WWFSVTWLEE-- 909 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~---~~~~~~~~~~-- 909 (936)
... ......+++.|+|||++.. ...++.++||||+||++|||++|+.||...... ..........
T Consensus 168 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 168 DDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp TTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 332 2234568999999998742 357899999999999999999999999753321 1111111111
Q ss_pred ----------------------------HhhhccccceeecccccccccccccC
Q 002321 910 ----------------------------HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ----------------------------~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
......+.+++.+||..||.+||+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ 298 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHH
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHH
Confidence 11224577888999999999999874
No 93
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=353.49 Aligned_cols=246 Identities=23% Similarity=0.305 Sum_probs=202.2
Q ss_pred cccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
...|+..+.||+|+||.||+|++. +++.||||+++........+.+.+|++++++++||||+++++++.+....
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 345677889999999999999975 24789999997665445567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCE
Q 002321 763 LLIYEFVSGGSLHKHLHEGSG---------------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNV 821 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NI 821 (936)
++||||+++|+|.+++..... ...+++.+++.++.|+++||+|||++||+||||||+||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NI 205 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC 205 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceE
Confidence 999999999999999976421 13589999999999999999999999999999999999
Q ss_pred EEcCCCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhH
Q 002321 822 LIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMW 900 (936)
Q Consensus 822 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~ 900 (936)
+++.++.+||+|||+++...............+++.|+|||.+. ...++.++||||+||++|||++ |+.||.......
T Consensus 206 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 284 (343)
T 1luf_A 206 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284 (343)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred EECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc-cCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence 99999999999999998765433333344556788999999884 4468999999999999999999 999998876543
Q ss_pred HHHHHHH-----HHHhhhccccceeecccccccccccccC
Q 002321 901 WFSVTWL-----EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 901 ~~~~~~~-----~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
....... .+...+..+.+++.+||..||.+||+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 324 (343)
T 1luf_A 285 VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFC 324 (343)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence 3211110 1123446788999999999999999874
No 94
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=344.15 Aligned_cols=240 Identities=25% Similarity=0.320 Sum_probs=191.5
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-------------------------hHHHHHHHHHHHHc
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-------------------------SQEDFEREVKKLGK 743 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------------------------~~~~~~~E~~~l~~ 743 (936)
..|+..+.||+|+||.||+|+.. +++.||||++....... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 34677889999999999999975 58899999996543211 13568899999999
Q ss_pred CCCCCcceeeeEEEe--CCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCE
Q 002321 744 VRHPNLVTLEGYYWT--QSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNV 821 (936)
Q Consensus 744 l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NI 821 (936)
++||||+++++++.+ ....++||||+++++|.++.... .+++.++..++.|+++||+|||++||+||||||+||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL 168 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 999999999999986 56789999999999998876432 389999999999999999999999999999999999
Q ss_pred EEcCCCCeEEeeccCccccCCCccccccccccCcccccCcccccCccc--CCchhhHHHHHHHHHHHHcCCCCCCccchh
Q 002321 822 LIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVK--ITDKCDVYGFGVLVLEVVTGKRPLSTWKMM 899 (936)
Q Consensus 822 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~ 899 (936)
+++.++.+||+|||+++....... ......+|+.|+|||.+.+... ++.++||||+||++|||++|+.||...+..
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 999999999999999987643222 2234578999999998854432 478899999999999999999999887654
Q ss_pred HHHHHHHHH------HHhhhccccceeecccccccccccccC
Q 002321 900 WWFSVTWLE------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 900 ~~~~~~~~~------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
......... ....++.+.+++.+||..||.+||+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~ 288 (298)
T 2zv2_A 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVP 288 (298)
T ss_dssp HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHH
Confidence 332211110 012346688999999999999999863
No 95
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.1e-39 Score=352.86 Aligned_cols=240 Identities=25% Similarity=0.258 Sum_probs=193.6
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC----eeEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS----LQLL 764 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 764 (936)
...|+..++||+|+||+||+|++. ++.||||+++... ......++|+.++++++||||+++++++.+.. ..++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 445788889999999999999986 8999999996542 23455677999999999999999999998754 3689
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CcccCCCCCCCEEEcCCCCeEEeec
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS----------NIIHYNIKSSNVLIDGSGEPKVGDY 834 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~----------~ivH~Dlkp~NIll~~~~~~kl~Df 834 (936)
||||+++|+|.++++... +++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 100 v~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EEECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 999999999999997643 89999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCccccccccccCcccccCcccccCc----ccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH--------
Q 002321 835 GLARLLPMLDRYVLSSKIQSALGYMAPEFACRT----VKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF-------- 902 (936)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~-------- 902 (936)
|+++...............+|+.|+|||++.+. ..++.++||||+||++|||++|+.||.........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999876544433334446789999999988542 35667899999999999999999999764321000
Q ss_pred ---HHHHHHH----------------HhhhccccceeecccccccccccccC
Q 002321 903 ---SVTWLEE----------------HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 903 ---~~~~~~~----------------~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
....... ....+.+.+++.+||..||.+||+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 307 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAG 307 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHH
Confidence 0000000 01113378899999999999999864
No 96
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.6e-39 Score=357.20 Aligned_cols=247 Identities=27% Similarity=0.353 Sum_probs=202.0
Q ss_pred ccccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCC
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQS 760 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (936)
....|+..+.||+|+||.||+|++. +++.||||+++........+.+.+|+++++++ +||||+++++++.+.+
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3456788889999999999999842 46899999997665445567899999999999 7999999999998754
Q ss_pred -eeEEEEEecCCCChhhhhhccCC--------------------------------------------------------
Q 002321 761 -LQLLIYEFVSGGSLHKHLHEGSG-------------------------------------------------------- 783 (936)
Q Consensus 761 -~~~lv~e~~~~g~L~~~l~~~~~-------------------------------------------------------- 783 (936)
..++||||+++|+|.++++....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 48999999999999999976532
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccccccccCcc
Q 002321 784 -------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSAL 856 (936)
Q Consensus 784 -------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~ 856 (936)
...+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...............+|+
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~ 259 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCc
Confidence 1228899999999999999999999999999999999999999999999999998765444444445567888
Q ss_pred cccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHHH------HHhhhccccceeecccccccc
Q 002321 857 GYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWLE------EHWKKAEWRNVSMRSCKGSSR 929 (936)
Q Consensus 857 ~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~p~ 929 (936)
.|+|||++. ...++.++||||+||++|||++ |+.||............... +...++.+.+++.+||..||.
T Consensus 260 ~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 338 (359)
T 3vhe_A 260 KWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 338 (359)
T ss_dssp GGCCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred eeEChhhhc-CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 999999884 5578999999999999999998 99999876543222111111 233456788999999999999
Q ss_pred cccccC
Q 002321 930 QRRRFQ 935 (936)
Q Consensus 930 ~Rp~f~ 935 (936)
+||+++
T Consensus 339 ~Rps~~ 344 (359)
T 3vhe_A 339 QRPTFS 344 (359)
T ss_dssp GSCCHH
T ss_pred hCCCHH
Confidence 999863
No 97
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.3e-38 Score=342.74 Aligned_cols=243 Identities=25% Similarity=0.364 Sum_probs=191.3
Q ss_pred ccccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
....|...++||+|+||.||+|++. ..+|||+++..... ...+.+.+|++++++++||||+++++++. .+..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 3445677889999999999999865 46999998764433 33577899999999999999999999875 45578999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++++|.+++.... ..+++.++..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++........
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999999997543 23899999999999999999999999999999999999999999999999999865433333
Q ss_pred cccccccCcccccCccccc--CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH----H------Hhhhc
Q 002321 847 VLSSKIQSALGYMAPEFAC--RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE----E------HWKKA 914 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~----~------~~~~~ 914 (936)
.......|++.|+|||++. ....++.++||||+||++|||++|+.||............... + ...++
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCH
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcH
Confidence 3344567899999999874 2456889999999999999999999999876553222111111 0 11245
Q ss_pred cccceeecccccccccccccC
Q 002321 915 EWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 915 ~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+.+++.+||..||.+||+++
T Consensus 269 ~l~~li~~~l~~~p~~RPs~~ 289 (307)
T 3lb7_A 269 AMKRLVADCVKKVKEERPLFP 289 (307)
T ss_dssp HHHHHHHHHSCSSSTTSCCHH
T ss_pred HHHHHHHHHhhCChhhCcCHH
Confidence 678899999999999999874
No 98
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=358.64 Aligned_cols=240 Identities=22% Similarity=0.310 Sum_probs=198.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
...|+..++||+|+||.||+|... +|+.||+|++...... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 345788889999999999999975 6899999999765433 33567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc---CCCCeEEeeccCccccCCC
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID---GSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~ 843 (936)
||+++|+|.+.+..... +++.++..++.|++.||+|||++||+||||||+||+++ .++.+||+|||+++.....
T Consensus 90 E~~~gg~L~~~i~~~~~---~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 90 DLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CCCBCCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred EeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 99999999999887543 89999999999999999999999999999999999998 5678999999999866432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------H--Hhhhcc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------E--HWKKAE 915 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~--~~~~~~ 915 (936)
. .......||+.|+|||++ ....++.++||||+||++|+|++|+.||.+.+........... + ...++.
T Consensus 167 ~--~~~~~~~gt~~Y~APE~l-~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 243 (444)
T 3soa_A 167 Q--QAWFGFAGTPGYLSPEVL-RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 243 (444)
T ss_dssp C--CBCCCSCSCGGGCCHHHH-TTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred C--ceeecccCCcccCCHHHh-cCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHH
Confidence 2 222346789999999998 4557899999999999999999999999887654333221110 1 123467
Q ss_pred ccceeeccccccccccccc
Q 002321 916 WRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f 934 (936)
+++++.+||..||.+||+.
T Consensus 244 ~~~li~~~L~~dP~~Rpta 262 (444)
T 3soa_A 244 AKDLINKMLTINPSKRITA 262 (444)
T ss_dssp HHHHHHHHSCSSTTTSCCH
T ss_pred HHHHHHHHcCCChhHCCCH
Confidence 8899999999999999985
No 99
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=356.00 Aligned_cols=246 Identities=25% Similarity=0.314 Sum_probs=204.7
Q ss_pred cccccCCCcccccCceEEEEEEeC--------CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR--------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQ 759 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (936)
...|...++||+|+||+||+|++. ++..||||+++........+.+.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 345678889999999999999863 23579999997765555567899999999999 999999999999999
Q ss_pred CeeEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC
Q 002321 760 SLQLLIYEFVSGGSLHKHLHEGSG-------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS 826 (936)
Q Consensus 760 ~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~ 826 (936)
+..++||||+++|+|.+++..... ...+++.++++++.|++.||+|||+++|+||||||+||+++.+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 227 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC
Confidence 999999999999999999986542 1348999999999999999999999999999999999999999
Q ss_pred CCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHH
Q 002321 827 GEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVT 905 (936)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~ 905 (936)
+.+||+|||+++...............+++.|+|||++. +..++.++||||+||++|||++ |..||............
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~ 306 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 306 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 999999999998765544334444556788999999884 4578999999999999999999 99999887654333221
Q ss_pred HHH-----HHhhhccccceeecccccccccccccC
Q 002321 906 WLE-----EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 906 ~~~-----~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
... +...+..+.+++.+||..||.+||+++
T Consensus 307 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 341 (382)
T 3tt0_A 307 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 341 (382)
T ss_dssp HTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHH
Confidence 110 122346788899999999999999874
No 100
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.9e-38 Score=337.24 Aligned_cols=243 Identities=23% Similarity=0.302 Sum_probs=203.0
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..+.||+|+||.||+|+.. +++.||||++.........+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 34677789999999999999986 68999999997655455568899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++++|.+++.... .+++.++..++.|++.||+|||++|++||||||+||+++.++.+||+|||.+...........
T Consensus 87 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999999987543 389999999999999999999999999999999999999999999999999986643333333
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhccccceee
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAEWRNVSM 921 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 921 (936)
.....+++.|+|||.+.+...++.++||||+|+++|||++|+.||............+.. ....+..+.+++.
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 243 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHH
Confidence 345678999999999865544578999999999999999999999876543222222211 1223466788999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+++
T Consensus 244 ~~l~~~p~~Rps~~ 257 (276)
T 2yex_A 244 KILVENPSARITIP 257 (276)
T ss_dssp HHSCSSTTTSCCHH
T ss_pred HHCCCCchhCCCHH
Confidence 99999999999863
No 101
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=353.09 Aligned_cols=247 Identities=25% Similarity=0.321 Sum_probs=199.7
Q ss_pred ccccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCC
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQS 760 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (936)
....|+..+.||+|+||.||+|++. +++.||||+++........+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3455778889999999999999962 35689999997654444557899999999999 8999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccCCC--------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCC
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSGG--------------------NFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSN 820 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~N 820 (936)
..++||||+++|+|.+++...... ..+++..++.++.|++.||+|||++||+||||||+|
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N 202 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 202 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence 999999999999999999765421 237899999999999999999999999999999999
Q ss_pred EEEcCCCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchh
Q 002321 821 VLIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMM 899 (936)
Q Consensus 821 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~ 899 (936)
|+++.++.+||+|||+++...............+++.|+|||.+. ...++.++||||+||++|||++ |..||......
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc-cCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 999999999999999998665433333344556788899999884 4568999999999999999998 99999876543
Q ss_pred HHHHHHHH------HHHhhhccccceeecccccccccccccC
Q 002321 900 WWFSVTWL------EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 900 ~~~~~~~~------~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
........ .+...++.+.+++.+||..||.+||+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 323 (344)
T 1rjb_A 282 ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFP 323 (344)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 22211111 1233457788999999999999999874
No 102
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.9e-38 Score=347.38 Aligned_cols=246 Identities=25% Similarity=0.330 Sum_probs=204.6
Q ss_pred cccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
...|...+.||+|+||.||+|+.. +++.||||+++........+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 445678889999999999999862 35789999997655445567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCE
Q 002321 763 LLIYEFVSGGSLHKHLHEGSG---------------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNV 821 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NI 821 (936)
++||||+++|+|.+++..... ...+++.++++++.|+++||+|||+++|+||||||+||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NI 181 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI 181 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheE
Confidence 999999999999999986542 12488999999999999999999999999999999999
Q ss_pred EEcCCCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhH
Q 002321 822 LIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMW 900 (936)
Q Consensus 822 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~ 900 (936)
+++.++.+||+|||+++...............+++.|+|||.+. +..++.++||||+||++|||++ |+.||.......
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 260 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhc-CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999998765444433444556788899999884 4568999999999999999999 999998876643
Q ss_pred HHHHHHH-----HHHhhhccccceeecccccccccccccC
Q 002321 901 WFSVTWL-----EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 901 ~~~~~~~-----~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
....... .+...++.+.+++.+||..||.+||+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 300 (314)
T 2ivs_A 261 LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300 (314)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence 3322111 1123456788999999999999999864
No 103
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.8e-38 Score=337.53 Aligned_cols=241 Identities=24% Similarity=0.337 Sum_probs=201.4
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
...|+..+.||+|+||.||+|+++++..||||+++.... ..+++.+|++++++++||||+++++++.+....++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 345678889999999999999998888999999975543 356799999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++++|.+++.... ..+++.+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++....... ..
T Consensus 85 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~ 161 (268)
T 3sxs_A 85 ISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VS 161 (268)
T ss_dssp CTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-EE
T ss_pred cCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-hc
Confidence 99999999997643 2389999999999999999999999999999999999999999999999999987643322 22
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceeec
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 922 (936)
.....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||............. ..+...++.+.+++.+
T Consensus 162 ~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 240 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVF-HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYS 240 (268)
T ss_dssp CCSCCCCGGGCCHHHH-HHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHH
T ss_pred ccCCCcCcccCCHHHH-hccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHH
Confidence 3344567789999988 45568999999999999999999 999998776543322111 1123345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 241 ~l~~~p~~Rps~~ 253 (268)
T 3sxs_A 241 CWHELPEKRPTFQ 253 (268)
T ss_dssp TTCSSGGGSCCHH
T ss_pred HcCCChhhCcCHH
Confidence 9999999999874
No 104
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.9e-38 Score=351.04 Aligned_cols=240 Identities=20% Similarity=0.258 Sum_probs=192.4
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHH-HHcCCCCCcceeeeEEEeCCeeEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKK-LGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
...|+..+.||+|+||.||+|+.+ +++.||||+++..... .....+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 445788889999999999999987 4889999999765432 224556677776 577899999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+++|+|.+++.+... +++..+..++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~- 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERC---FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH- 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC-
T ss_pred EEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccC-
Confidence 9999999999999987543 889999999999999999999999999999999999999999999999999854221
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH----HHhhhcccccee
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE----EHWKKAEWRNVS 920 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 920 (936)
........||+.|+|||++. +..++.++||||+||++|||++|+.||...+........... +...+..+++++
T Consensus 193 -~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li 270 (373)
T 2r5t_A 193 -NSTTSTFCGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLL 270 (373)
T ss_dssp -CCCCCSBSCCCCCCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHH
T ss_pred -CCccccccCCccccCHHHhC-CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHH
Confidence 12234567899999999984 557899999999999999999999999887664333221111 122446788999
Q ss_pred eccccccccccccc
Q 002321 921 MRSCKGSSRQRRRF 934 (936)
Q Consensus 921 ~~~l~~~p~~Rp~f 934 (936)
.+||..||.+||+.
T Consensus 271 ~~lL~~dp~~R~~~ 284 (373)
T 2r5t_A 271 EGLLQKDRTKRLGA 284 (373)
T ss_dssp HHHTCSSGGGSTTT
T ss_pred HHHcccCHHhCCCC
Confidence 99999999999986
No 105
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.2e-38 Score=338.44 Aligned_cols=239 Identities=22% Similarity=0.259 Sum_probs=192.2
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-hHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-SQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
.|+..++||+|+||+||+|+.. +++.||||+++...... ....+.+|+.++++++||||+++++++.+....++||||
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 82 (292)
T 3o0g_A 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence 3677789999999999999986 58999999997654332 357788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++ ++.+.+.... ..+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...... ..
T Consensus 83 ~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 157 (292)
T 3o0g_A 83 CDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--RC 157 (292)
T ss_dssp CSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--SC
T ss_pred CCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--cc
Confidence 975 6666555432 238999999999999999999999999999999999999999999999999998764322 22
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHH--H----------------
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEE--H---------------- 910 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~--~---------------- 910 (936)
.....+|+.|+|||++.+...++.++||||+||++|||++|..||................ .
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 3445678999999998666568999999999999999999888864443322211111110 0
Q ss_pred ----------------hhhccccceeeccccccccccccc
Q 002321 911 ----------------WKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 911 ----------------~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
..++.+++++.+|+..||.+||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 277 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA 277 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCH
Confidence 122445689999999999999985
No 106
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-38 Score=348.51 Aligned_cols=244 Identities=24% Similarity=0.323 Sum_probs=192.6
Q ss_pred ccccccCCCcccccCceEEEEEEeC-CCc----EEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLR-DGR----PVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
....|+..+.||+|+||+||+|++. +++ +||+|+++........+++.+|+.++++++||||+++++++.+.. .
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 3456788889999999999999965 344 468888865544455688999999999999999999999998765 6
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
++|+||+++|+|.+++..... .+++..++.++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++....
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 789999999999999987542 389999999999999999999999999999999999999999999999999987754
Q ss_pred CccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccc
Q 002321 843 LDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEW 916 (936)
Q Consensus 843 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~ 916 (936)
...........+|+.|+|||.+. +..++.++||||+||++|||++ |+.||............. ..+...+..+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDV 248 (327)
T ss_dssp TCC-------CCCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHH
T ss_pred CcccccccCCCccccccChHHhc-cCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHH
Confidence 44433344455688999999884 5578999999999999999999 999998876543332211 1122344568
Q ss_pred cceeecccccccccccccC
Q 002321 917 RNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+++.+||..||.+||+++
T Consensus 249 ~~li~~~l~~~p~~Rps~~ 267 (327)
T 3poz_A 249 YMIMVKCWMIDADSRPKFR 267 (327)
T ss_dssp HHHHHHHTCSCGGGSCCHH
T ss_pred HHHHHHHcCCChhhCCCHH
Confidence 8899999999999999874
No 107
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4e-38 Score=344.59 Aligned_cols=246 Identities=25% Similarity=0.341 Sum_probs=204.1
Q ss_pred cccccCCCcccccCceEEEEEEe------CCCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVL------RDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSL 761 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 761 (936)
...|+..+.||+|+||.||+|++ .+++.||||+++........+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 44577888999999999999985 246899999997665445567899999999999 99999999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCC---------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGG---------------NFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS 826 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~ 826 (936)
.++||||+++|+|.+++...... ..+++.++++++.|++.||+|||++||+||||||+||+++.+
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG 181 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC
Confidence 99999999999999999865421 248999999999999999999999999999999999999999
Q ss_pred CCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHH
Q 002321 827 GEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVT 905 (936)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~ 905 (936)
+.+||+|||+++...............+++.|+|||.+. ...++.++||||+||++|||++ |+.||............
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 260 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHH
Confidence 999999999998775544333344556778899999884 4578999999999999999999 99999876543222111
Q ss_pred HHH------HHhhhccccceeecccccccccccccC
Q 002321 906 WLE------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 906 ~~~------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
... +...++.+.+++.+||..||.+||+++
T Consensus 261 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 296 (313)
T 1t46_A 261 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296 (313)
T ss_dssp HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHH
Confidence 111 223456788999999999999999863
No 108
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.9e-38 Score=338.60 Aligned_cols=241 Identities=24% Similarity=0.349 Sum_probs=198.6
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
...|+..+.||+|+||.||+|+++++..||||+++.... ..+++.+|++++++++||||+++++++.+....++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 345678889999999999999999888999999976543 357799999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++++|.+++..... .+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...... ...
T Consensus 101 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHS
T ss_pred cCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccc-ccc
Confidence 999999999976332 38999999999999999999999999999999999999999999999999998664322 222
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceeec
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 922 (936)
.....+++.|+|||.+. ...++.++||||+|+++|||++ |+.||............. ..+...++.+.+++.+
T Consensus 178 ~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 256 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYS 256 (283)
T ss_dssp TTSTTSCGGGCCHHHHH-HCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred ccCCccCcccCCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHH
Confidence 33445677899999884 4468999999999999999998 999998876543222111 1123345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 257 ~l~~~p~~Rps~~ 269 (283)
T 3gen_A 257 CWHEKADERPTFK 269 (283)
T ss_dssp TTCSSGGGSCCHH
T ss_pred HccCChhHCcCHH
Confidence 9999999999874
No 109
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.9e-38 Score=363.33 Aligned_cols=242 Identities=27% Similarity=0.381 Sum_probs=199.5
Q ss_pred ccccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
....|+..++||+|+||+||+|+++++..||||+++... ...+.+.+|++++++++||||+++++++. ....++|||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 344567788999999999999999888999999997653 34678999999999999999999999986 567899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++|+|.++++.... ..+++.+++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 263 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~ 340 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YT 340 (454)
T ss_dssp CCTTCBHHHHHHSHHH-HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HH
T ss_pred ecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-ee
Confidence 9999999999975421 137889999999999999999999999999999999999999999999999998764321 22
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceee
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSM 921 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 921 (936)
......+++.|+|||++. ...++.++|||||||++|||++ |+.||...+......... ..+...++.+.+++.
T Consensus 341 ~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~ 419 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAIN-FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM 419 (454)
T ss_dssp TTCSSSSCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHH
T ss_pred ccCCCcccccccCHHHhc-cCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 223345677899999984 4568999999999999999999 999998766543221111 012234567889999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+|+
T Consensus 420 ~cl~~dp~~RPt~~ 433 (454)
T 1qcf_A 420 RCWKNRPEERPTFE 433 (454)
T ss_dssp HHTCSSGGGSCCHH
T ss_pred HHccCChhHCcCHH
Confidence 99999999999984
No 110
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.1e-38 Score=355.81 Aligned_cols=242 Identities=19% Similarity=0.245 Sum_probs=197.5
Q ss_pred ccccCCCcccccCceEEEEEEeCC-CcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRD-GRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..++||+|+||+||+|+.++ ++.||||+++..... .....+.+|+.++..++||||+++++++.+....++||
T Consensus 74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~ 153 (437)
T 4aw2_A 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153 (437)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEE
Confidence 456788899999999999999874 789999999653221 12234889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 154 Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~- 230 (437)
T 4aw2_A 154 DYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT- 230 (437)
T ss_dssp CCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC-
T ss_pred ecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC-
Confidence 9999999999998632 2389999999999999999999999999999999999999999999999999976643222
Q ss_pred cccccccCcccccCccccc----CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-H-----HH---hhh
Q 002321 847 VLSSKIQSALGYMAPEFAC----RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-E-----EH---WKK 913 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~----~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-~-----~~---~~~ 913 (936)
.......||+.|+|||++. +...++.++||||+||++|||++|+.||...+.......... . +. ..+
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s 310 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS 310 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSC
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCC
Confidence 2234467999999999885 245689999999999999999999999988766433322111 1 11 145
Q ss_pred ccccceeeccccccccc--cccc
Q 002321 914 AEWRNVSMRSCKGSSRQ--RRRF 934 (936)
Q Consensus 914 ~~~~~~~~~~l~~~p~~--Rp~f 934 (936)
+.+++++.+|+..+|.+ ||+.
T Consensus 311 ~~~~dLi~~lL~~~~~r~~r~~~ 333 (437)
T 4aw2_A 311 ENAKDLIRRLICSREHRLGQNGI 333 (437)
T ss_dssp HHHHHHHHTTSSCGGGCTTTTTT
T ss_pred HHHHHHHHHHhcccccccCCCCH
Confidence 67889999999888876 6654
No 111
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.7e-38 Score=334.75 Aligned_cols=239 Identities=20% Similarity=0.288 Sum_probs=178.6
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|++. +++.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 34788899999999999999965 6899999999655332 23567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+ ++++.+++..... +++.++.+++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 93 e~~-~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred hhc-CCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc--
Confidence 999 7888888876443 8999999999999999999999999999999999999999999999999997654322
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 922 (936)
......+++.|+|||.+.+....+.++||||+||++|||++|+.||............. ..+...++.+.+++.+
T Consensus 167 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 245 (275)
T 2eue_A 167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 245 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHH
T ss_pred -cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHH
Confidence 22344688999999998655455789999999999999999999998876543222111 1123345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 246 ~l~~dP~~Rps~~ 258 (275)
T 2eue_A 246 MLIVNPLNRISIH 258 (275)
T ss_dssp HSCSSGGGSCCHH
T ss_pred HhhcCHhHCCCHH
Confidence 9999999999863
No 112
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.4e-38 Score=349.55 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=201.2
Q ss_pred cccccCCCcccccCceEEEEEEeCC------CcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD------GRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSL 761 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 761 (936)
...|+..+.||+|+||.||+|+... +..||||++.........+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 3456777899999999999999753 2479999997665445567899999999999 89999999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeE
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSG-----------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPK 830 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~k 830 (936)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++||+||||||+||+++.++.+|
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~k 204 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK 204 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEE
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEE
Confidence 9999999999999999975321 23478999999999999999999999999999999999999999999
Q ss_pred EeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH--
Q 002321 831 VGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-- 907 (936)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-- 907 (936)
|+|||+++...............+++.|+|||.+. ...++.++||||+||++|||++ |..||..............
T Consensus 205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 283 (333)
T 2i1m_A 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283 (333)
T ss_dssp BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHT
T ss_pred ECccccccccccccceeecCCCCCCccccCHHHhc-cCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcC
Confidence 99999998664433333334455678899999884 4568999999999999999998 9999987654322211111
Q ss_pred ----HHHhhhccccceeecccccccccccccC
Q 002321 908 ----EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 908 ----~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+...+..+.+++.+||..||.+||+++
T Consensus 284 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 315 (333)
T 2i1m_A 284 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQ 315 (333)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhccChhhCcCHH
Confidence 1233456788999999999999999874
No 113
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-37 Score=351.99 Aligned_cols=246 Identities=14% Similarity=0.192 Sum_probs=199.3
Q ss_pred cccccCCCccccc--CceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 689 HALLNKDCELGRG--GFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 689 ~~~~~~~~~iG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
...|+..++||+| +||.||+|+.. +|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4457888899999 99999999987 6899999999765433 235678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+++|+|.+++..... ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||.+.......
T Consensus 104 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred EEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999999999987532 238999999999999999999999999999999999999999999999999986542211
Q ss_pred c-----ccccccccCcccccCcccccCc-ccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH------------
Q 002321 845 R-----YVLSSKIQSALGYMAPEFACRT-VKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW------------ 906 (936)
Q Consensus 845 ~-----~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~------------ 906 (936)
. ........+++.|+|||++.+. ..++.++||||+||++|||++|+.||.+.+.........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence 1 1112234678899999998553 568999999999999999999999998754322111000
Q ss_pred --------------------------------------HHHHhhhccccceeecccccccccccccC
Q 002321 907 --------------------------------------LEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 907 --------------------------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..+...++.+.+++.+||..||.+||+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ 329 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSAS 329 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHH
Confidence 01122345688899999999999999863
No 114
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.5e-38 Score=355.10 Aligned_cols=240 Identities=19% Similarity=0.243 Sum_probs=196.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||+||+|+.+ +++.||||+++..... ...+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~ 148 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 45677889999999999999987 5889999999653221 12345789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.++++... +++..+..++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++...... .
T Consensus 149 E~~~gg~L~~~l~~~~----~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~-~ 223 (410)
T 3v8s_A 149 EYMPGGDLVNLMSNYD----VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-M 223 (410)
T ss_dssp CCCTTEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS-E
T ss_pred eCCCCCcHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC-c
Confidence 9999999999997643 8999999999999999999999999999999999999999999999999998764322 2
Q ss_pred cccccccCcccccCcccccCcc---cCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------HH--hhhcc
Q 002321 847 VLSSKIQSALGYMAPEFACRTV---KITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------EH--WKKAE 915 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~---~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~~--~~~~~ 915 (936)
.......||+.|+|||++.... .++.++||||+||++|||++|+.||...+........... +. ..+..
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~ 303 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 303 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHH
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHH
Confidence 2234567999999999885432 2789999999999999999999999887654333221111 11 24467
Q ss_pred ccceeeccccccccc--cccc
Q 002321 916 WRNVSMRSCKGSSRQ--RRRF 934 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~--Rp~f 934 (936)
+++++.+||..+|.+ ||+.
T Consensus 304 ~~~li~~lL~~~~~rlgR~~~ 324 (410)
T 3v8s_A 304 AKNLICAFLTDREVRLGRNGV 324 (410)
T ss_dssp HHHHHHHHSSCGGGCTTSSCH
T ss_pred HHHHHHHHccChhhhCCCCCH
Confidence 889999999988777 7764
No 115
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8e-38 Score=345.39 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=202.5
Q ss_pred cccccCCCcccccCceEEEEEEeC--------CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR--------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQ 759 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (936)
...|+..+.||+|+||.||+|++. +++.||||+++........+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 456788889999999999999863 46789999997665445567899999999999 899999999999999
Q ss_pred CeeEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC
Q 002321 760 SLQLLIYEFVSGGSLHKHLHEGSG-------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS 826 (936)
Q Consensus 760 ~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~ 826 (936)
+..++||||+++|+|.+++..... ...+++.++++++.|++.||+|||+.||+||||||+||+++.+
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC
Confidence 999999999999999999986542 1238899999999999999999999999999999999999999
Q ss_pred CCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHH
Q 002321 827 GEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVT 905 (936)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~ 905 (936)
+.+||+|||+++...............+++.|+|||++. ...++.++||||+||++|||++ |+.||............
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 272 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhc-CCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHH
Confidence 999999999998765444333344456778899999884 4568999999999999999999 99999877654332211
Q ss_pred HHH-----HHhhhccccceeecccccccccccccC
Q 002321 906 WLE-----EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 906 ~~~-----~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
... +...+..+.+++.+||..||.+||+++
T Consensus 273 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 307 (334)
T 2pvf_A 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307 (334)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence 110 122346788999999999999999864
No 116
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-38 Score=363.23 Aligned_cols=240 Identities=21% Similarity=0.316 Sum_probs=201.6
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|...+.||+|+||.||+|++. +|+.||||++...... ...+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 34677889999999999999976 6999999999654321 23567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++.+.. .+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence 9999999999997644 38999999999999999999999999999999999999999999999999998764322
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 922 (936)
......|++.|+|||++.+....+.++||||+||++|||++|+.||.+........... ..+...++.+.+++.+
T Consensus 171 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~~ 249 (476)
T 2y94_A 171 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKH 249 (476)
T ss_dssp -CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHHH
T ss_pred -cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHHH
Confidence 22345789999999998665556889999999999999999999998876533221111 1123345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 250 ~L~~dP~~Rpt~~ 262 (476)
T 2y94_A 250 MLQVDPMKRATIK 262 (476)
T ss_dssp HTCSSTTTSCCHH
T ss_pred HcCCCchhCcCHH
Confidence 9999999999863
No 117
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.5e-38 Score=345.71 Aligned_cols=241 Identities=23% Similarity=0.321 Sum_probs=190.5
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCe----e
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSL----Q 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~ 762 (936)
..|+..+.||+|+||.||+|++. +++.||||+++..... .....+.+|+.++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 45777889999999999999974 6899999999765332 234678999999999999999999999876543 3
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
++||||+++++|.++++.... +++.++..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 899999999999999986543 89999999999999999999999999999999999999999999999999986643
Q ss_pred Cccc-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH--------HHhhh
Q 002321 843 LDRY-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE--------EHWKK 913 (936)
Q Consensus 843 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~--------~~~~~ 913 (936)
.... .......|++.|+|||.+. +..++.++||||+||++|||++|+.||............... ....+
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247 (311)
T ss_dssp -------------CCTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCC
T ss_pred cccccccccccCcCcccCCHHHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCC
Confidence 2221 2233456899999999984 457899999999999999999999999887654332211111 11245
Q ss_pred ccccceeeccccccccccccc
Q 002321 914 AEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 914 ~~~~~~~~~~l~~~p~~Rp~f 934 (936)
..+.+++.+||..||.+||+.
T Consensus 248 ~~l~~li~~~l~~dP~~R~~~ 268 (311)
T 3ork_A 248 ADLDAVVLKALAKNPENRYQT 268 (311)
T ss_dssp HHHHHHHHHHTCSSGGGSCSS
T ss_pred HHHHHHHHHHHhcCHhhChhh
Confidence 678899999999999999964
No 118
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.4e-38 Score=348.06 Aligned_cols=243 Identities=26% Similarity=0.324 Sum_probs=195.1
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcE----EEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRP----VAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQL 763 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (936)
...|+..+.||+|+||+||+|++. +++. ||+|++...........+.+|+.++++++||||+++++++. ....+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 345677889999999999999975 3443 78888754433333456788999999999999999999986 45678
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 764 LIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 9999999999999997642 23888999999999999999999999999999999999999999999999999887554
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhcccc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWR 917 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~ 917 (936)
..........+++.|+|||.+. ...++.++||||+||++|||++ |+.||.............. .+...+..+.
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIH-FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVY 247 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTT
T ss_pred cccccccCCCCcccccChHHhc-cCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHH
Confidence 4444445566788999999984 4568999999999999999999 9999988765433222111 1233456789
Q ss_pred ceeecccccccccccccC
Q 002321 918 NVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f~ 935 (936)
+++.+||..||.+||+++
T Consensus 248 ~li~~~l~~dp~~Rps~~ 265 (325)
T 3kex_A 248 MVMVKCWMIDENIRPTFK 265 (325)
T ss_dssp HHHHHHTCSCTTTSCCHH
T ss_pred HHHHHHcCCChhhCcCHH
Confidence 999999999999999874
No 119
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=345.84 Aligned_cols=236 Identities=22% Similarity=0.371 Sum_probs=181.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.+....++|||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 345778889999999999999987 47899999997542 34668899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC---CCCeEEeeccCccccCCCc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG---SGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~ 844 (936)
|+++|+|.+++.... .+++.++..++.|++.||+|||+.||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred eCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 999999999997644 3899999999999999999999999999999999999975 889999999999865322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHH---------Hhhhcc
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEE---------HWKKAE 915 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~---------~~~~~~ 915 (936)
.......+++.|+|||++. +..++.++||||+||++|||++|+.||................ .-.+..
T Consensus 205 --~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 281 (349)
T 2w4o_A 205 --VLMKTVCGTPGYCAPEILR-GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLN 281 (349)
T ss_dssp ----------CGGGSCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHH
T ss_pred --cccccccCCCCccCHHHhc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHH
Confidence 1223456899999999984 4568999999999999999999999997765432221111111 113456
Q ss_pred ccceeeccccccccccccc
Q 002321 916 WRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f 934 (936)
+.+++.+||..||.+||+.
T Consensus 282 ~~~li~~~L~~dP~~Rpt~ 300 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTT 300 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCH
T ss_pred HHHHHHHHccCChhhCcCH
Confidence 7889999999999999985
No 120
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6e-38 Score=364.10 Aligned_cols=242 Identities=25% Similarity=0.355 Sum_probs=202.1
Q ss_pred cccccCCCcccccCceEEEEEEeCC-CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD-GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..++||+|+||.||+|+++. +..||||+++... ...+++.+|++++++++||||+++++++.+....++|||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 4456778899999999999999874 8899999997543 246789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++|+|.++++.... ..+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 297 ~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~ 374 (495)
T 1opk_A 297 FMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYT 374 (495)
T ss_dssp CCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTC-CEE
T ss_pred ccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCC-cee
Confidence 9999999999986443 34899999999999999999999999999999999999999999999999999876432 222
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceee
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSM 921 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 921 (936)
......+++.|+|||++. ...++.++|||||||++|||++ |+.||...+......... ..+...++.+.+++.
T Consensus 375 ~~~~~~~~~~y~aPE~~~-~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 453 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 453 (495)
T ss_dssp CCTTCCCCGGGCCHHHHH-HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred ecCCCcCCcceeCHhHHh-cCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 233445677899999984 4568999999999999999999 999998876543332111 012234567889999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+|+
T Consensus 454 ~cl~~dP~~RPs~~ 467 (495)
T 1opk_A 454 ACWQWNPSDRPSFA 467 (495)
T ss_dssp HHTCSSGGGSCCHH
T ss_pred HHcCcChhHCcCHH
Confidence 99999999999974
No 121
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=353.36 Aligned_cols=239 Identities=20% Similarity=0.239 Sum_probs=196.9
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||+||+|+.+ +|+.||||+++..... ...+.+.+|..++.+++||||+++++++.+....++||
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVm 140 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 45678889999999999999986 6899999999653221 12345789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++.+.. ..+++..+..++.|++.||+|||++||+||||||+|||++.+|++||+|||+++.......
T Consensus 141 E~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~- 217 (412)
T 2vd5_A 141 EYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT- 217 (412)
T ss_dssp CCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC-
T ss_pred cCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCc-
Confidence 9999999999998643 2389999999999999999999999999999999999999999999999999987643221
Q ss_pred cccccccCcccccCcccccC------cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH--HH-------HHh
Q 002321 847 VLSSKIQSALGYMAPEFACR------TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW--LE-------EHW 911 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~------~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~--~~-------~~~ 911 (936)
.......||+.|+|||++.. ...++.++||||+||++|||++|+.||...+......... .. +..
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~ 297 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEG 297 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----C
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccC
Confidence 12234579999999998852 3468999999999999999999999998876543331111 11 123
Q ss_pred hhccccceeeccccccccccc
Q 002321 912 KKAEWRNVSMRSCKGSSRQRR 932 (936)
Q Consensus 912 ~~~~~~~~~~~~l~~~p~~Rp 932 (936)
.+.++++++.+||. +|.+|+
T Consensus 298 ~s~~~~dli~~lL~-~p~~Rl 317 (412)
T 2vd5_A 298 VPEEARDFIQRLLC-PPETRL 317 (412)
T ss_dssp CCHHHHHHHHTTSS-CGGGCT
T ss_pred CCHHHHHHHHHHcC-ChhhcC
Confidence 55778999999998 999985
No 122
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=348.17 Aligned_cols=239 Identities=23% Similarity=0.340 Sum_probs=198.0
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|++++++++||||+++++++.+....++||||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 45778889999999999999976 588999999865432 2356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC--CCCeEEeeccCccccCCCccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG--SGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
+++|+|.+++.... ..+++.++..++.|++.||+|||+.||+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-- 205 (387)
T 1kob_A 130 LSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-- 205 (387)
T ss_dssp CCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--
T ss_pred CCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc--
Confidence 99999999987543 23899999999999999999999999999999999999974 5789999999998764322
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-H-----H--Hhhhccccc
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-E-----E--HWKKAEWRN 918 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-~-----~--~~~~~~~~~ 918 (936)
......+|+.|+|||++. ...++.++||||+||++|||++|+.||...+.......... . + ...+..+++
T Consensus 206 -~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 283 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVD-REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283 (387)
T ss_dssp -CEEEECSSGGGCCHHHHT-TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred -ceeeeccCCCccCchhcc-CCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHH
Confidence 223456899999999884 55789999999999999999999999988765322211110 0 0 123467889
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 284 li~~~L~~dP~~Rpt~~ 300 (387)
T 1kob_A 284 FIKNLLQKEPRKRLTVH 300 (387)
T ss_dssp HHHTTSCSSGGGSCCHH
T ss_pred HHHHHcCCChhHCcCHH
Confidence 99999999999999863
No 123
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8.5e-38 Score=348.17 Aligned_cols=239 Identities=22% Similarity=0.289 Sum_probs=186.3
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 345788889999999999999987 689999999975432 23668899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC--eEEeeccCccccCCCcc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE--PKVGDYGLARLLPMLDR 845 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~~~~~~ 845 (936)
|+++|+|.+++..... +++.++..++.|++.||+|||++||+||||||+||+++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~--- 170 (361)
T 3uc3_A 97 YASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--- 170 (361)
T ss_dssp CCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc---
Confidence 9999999999976543 899999999999999999999999999999999999987765 99999999974322
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH--HHHH-HHHH-------hhhcc
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF--SVTW-LEEH-------WKKAE 915 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~--~~~~-~~~~-------~~~~~ 915 (936)
........||+.|+|||++.+....+.++||||+||++|||++|+.||......... .... .... ..++.
T Consensus 171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 250 (361)
T 3uc3_A 171 HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPE 250 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHH
T ss_pred cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHH
Confidence 122234568999999999865544455699999999999999999999875442111 1111 1111 13456
Q ss_pred ccceeecccccccccccccC
Q 002321 916 WRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+.+++.+||..||.+||+++
T Consensus 251 ~~~li~~~L~~dP~~Rps~~ 270 (361)
T 3uc3_A 251 CCHLISRIFVADPATRISIP 270 (361)
T ss_dssp HHHHHHHHSCSCTTTSCCHH
T ss_pred HHHHHHHHccCChhHCcCHH
Confidence 78899999999999999863
No 124
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5.1e-38 Score=345.38 Aligned_cols=246 Identities=22% Similarity=0.301 Sum_probs=184.3
Q ss_pred cccccCCCcccccCceEEEEEEeCCC----cEEEEEEeeccCc-cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee-
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDG----RPVAIKKLTVSSL-VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ- 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 762 (936)
...|+..+.||+|+||.||+|++... ..||||+++.... ....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 34567788999999999999997642 2799999975432 23467899999999999999999999999876655
Q ss_pred -----EEEEEecCCCChhhhhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeec
Q 002321 763 -----LLIYEFVSGGSLHKHLHEGSG---GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDY 834 (936)
Q Consensus 763 -----~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (936)
++||||+++|+|.+++..... ...+++.++.+++.|+++||+|||++||+||||||+||+++.++.+||+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCC
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeec
Confidence 899999999999999865432 124899999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----H
Q 002321 835 GLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----E 908 (936)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~ 908 (936)
|+++...............+++.|+|||.+ ....++.++||||+||++|||++ |+.||...+.......... .
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~ 260 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQ 260 (323)
T ss_dssp CC-----------------CCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC
T ss_pred cccccccccccccccccccCcccccCchhh-cCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCC
Confidence 999876544433334445567889999988 45578999999999999999999 9999988766433322111 1
Q ss_pred HHhhhccccceeecccccccccccccC
Q 002321 909 EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+...++.+.+++.+||..||.+||+++
T Consensus 261 ~~~~~~~l~~li~~~l~~dp~~Rps~~ 287 (323)
T 3qup_A 261 PPECMEEVYDLMYQCWSADPKQRPSFT 287 (323)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred CCccCHHHHHHHHHHccCChhhCcCHH
Confidence 222346788999999999999999853
No 125
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-38 Score=349.70 Aligned_cols=245 Identities=32% Similarity=0.582 Sum_probs=198.0
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
...|+..+.||+|+||.||+|+..+++.||||++...........+.+|++++++++||||+++++++.+....++||||
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 108 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEEC
T ss_pred hhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEe
Confidence 34578889999999999999998889999999997654433345789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 769 VSGGSLHKHLHEGSG-GNFLSWNERFNVIQGTAKSLAHLHQS---NIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
+++|+|.++++.... ...+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++......
T Consensus 109 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 188 (326)
T 3uim_A 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188 (326)
T ss_dssp CTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSS
T ss_pred ccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccc
Confidence 999999999986543 33589999999999999999999999 99999999999999999999999999998764322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh---HHHHHHHHH-------------
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM---WWFSVTWLE------------- 908 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~---~~~~~~~~~------------- 908 (936)
. .......+|+.|+|||++. ...++.++||||+||++|||++|+.||...... ......+..
T Consensus 189 ~-~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (326)
T 3uim_A 189 T-HVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 266 (326)
T ss_dssp S-CEECCCCSCGGGCCHHHHH-HSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSC
T ss_pred c-cccccccCCcCccCHHHhc-cCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcC
Confidence 2 2234456899999999884 446899999999999999999999999632210 000111111
Q ss_pred -------HHhhhccccceeecccccccccccccC
Q 002321 909 -------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 -------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+......+.+++.+||..||.+||+++
T Consensus 267 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 300 (326)
T 3uim_A 267 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300 (326)
T ss_dssp TTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHH
T ss_pred hhhccccCHHHHHHHHHHHHHHhCcCCccCCCHH
Confidence 111225677888999999999999864
No 126
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.2e-37 Score=340.16 Aligned_cols=247 Identities=25% Similarity=0.273 Sum_probs=197.8
Q ss_pred ccccccccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-hHHHHHHHHHHHHcCCCCCcceeeeEEEeCCe
Q 002321 684 FSTGTHALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-SQEDFEREVKKLGKVRHPNLVTLEGYYWTQSL 761 (936)
Q Consensus 684 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (936)
+.......|+..+.||+|+||.||+|+.. +|+.||||++....... ..+.+.+|+.++++++||||+++++++.+...
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 98 (331)
T 4aaa_A 19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR 98 (331)
T ss_dssp CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCE
Confidence 33445566888899999999999999986 48999999986554332 24668899999999999999999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||++++++.++...... +++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEEEEecCCcchHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 9999999999999888765433 8999999999999999999999999999999999999999999999999997654
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-------------H
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-------------E 908 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-------------~ 908 (936)
... .......+++.|+|||.+.+...++.++||||+||++|||++|+.||.............. .
T Consensus 176 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
T 4aaa_A 176 APG--EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred CCc--cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhh
Confidence 322 1223456889999999986655789999999999999999999999988765322211100 0
Q ss_pred H----------------------HhhhccccceeecccccccccccccC
Q 002321 909 E----------------------HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ~----------------------~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
. ...++.+.+++.+||..||.+||+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 302 (331)
T 4aaa_A 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCA 302 (331)
T ss_dssp HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGG
T ss_pred hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHH
Confidence 0 01245678899999999999999874
No 127
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.9e-38 Score=336.41 Aligned_cols=242 Identities=22% Similarity=0.292 Sum_probs=196.7
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
.+.|...++||+|+||.||+|+.+ ++..||+|++.........+.+.+|++++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 456788889999999999999976 5889999999766555557889999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE---cCCCCeEEeeccCccccCCC
Q 002321 768 FVSGGSLHKHLHEGS-GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI---DGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 843 (936)
|+++|+|.+++.... ....+++..+..++.|+++||+|||++||+||||||+||++ +.++.+||+|||+++.....
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 999999999886431 12348999999999999999999999999999999999999 45678999999999765432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-H------Hhhhccc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-E------HWKKAEW 916 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-~------~~~~~~~ 916 (936)
.......+++.|+|||.+. ..++.++||||+||++|||++|+.||............... + ...++.+
T Consensus 181 ---~~~~~~~~t~~y~aPE~~~--~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (285)
T 3is5_A 181 ---EHSTNAAGTALYMAPEVFK--RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQA 255 (285)
T ss_dssp ---------CTTGGGCCHHHHT--TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHH
T ss_pred ---ccCcCcccccCcCChHHhc--cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHH
Confidence 2234456899999999883 35789999999999999999999999887654333222111 1 1134567
Q ss_pred cceeecccccccccccccC
Q 002321 917 RNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+++.+||..||.+||+++
T Consensus 256 ~~li~~~L~~dP~~Rps~~ 274 (285)
T 3is5_A 256 VDLLKQMLTKDPERRPSAA 274 (285)
T ss_dssp HHHHHHHTCSCTTTSCCHH
T ss_pred HHHHHHHccCChhhCcCHH
Confidence 8899999999999999863
No 128
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.1e-37 Score=350.92 Aligned_cols=241 Identities=21% Similarity=0.297 Sum_probs=192.6
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCC--CCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVR--HPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|...+++.||||++...... ...+.+.+|++++++++ ||||+++++++......++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 457888899999999999999888999999999765432 34578899999999996 599999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
| +.+++|.+++.... .+++.++..++.||+.||+|||+.+|+||||||+|||++ ++.+||+|||+++.+......
T Consensus 136 E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 45899999998754 388999999999999999999999999999999999996 589999999999876543333
Q ss_pred cccccccCcccccCcccccC----------cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------H
Q 002321 847 VLSSKIQSALGYMAPEFACR----------TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------E 909 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~----------~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~ 909 (936)
.......||+.|+|||++.+ ...++.++||||+||++|||++|+.||............... +
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 290 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCC
Confidence 33345679999999998843 135889999999999999999999999875432111111111 1
Q ss_pred HhhhccccceeecccccccccccccC
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+.+..+.+++.+||..||.+||+++
T Consensus 291 ~~~~~~~~~li~~~L~~dP~~Rps~~ 316 (390)
T 2zmd_A 291 DIPEKDLQDVLKCCLKRDPKQRISIP 316 (390)
T ss_dssp CCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred ccchHHHHHHHHHHcccChhhCCCHH
Confidence 22345688999999999999999863
No 129
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=347.80 Aligned_cols=235 Identities=21% Similarity=0.296 Sum_probs=190.4
Q ss_pred cCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEecCC
Q 002321 693 NKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFVSG 771 (936)
Q Consensus 693 ~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (936)
...+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+....++||||+++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 34567999999999999975 589999999976543 3457899999999999999999999999999999999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE--cCCCCeEEeeccCccccCCCcccccc
Q 002321 772 GSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI--DGSGEPKVGDYGLARLLPMLDRYVLS 849 (936)
Q Consensus 772 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~~~~~~~~~~ 849 (936)
|+|.+++.... ..+++.++..++.|+++||+|||+.+|+||||||+|||+ +.++.+||+|||+++...... ..
T Consensus 171 ~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~ 245 (373)
T 2x4f_A 171 GELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KL 245 (373)
T ss_dssp CEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BC
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cc
Confidence 99999886543 238999999999999999999999999999999999999 667899999999998764322 22
Q ss_pred ccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH------HH--Hhhhccccceee
Q 002321 850 SKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL------EE--HWKKAEWRNVSM 921 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~ 921 (936)
....+|+.|+|||++ ....++.++||||+||++|||++|+.||.............. .+ ...++.+.+++.
T Consensus 246 ~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~ 324 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324 (373)
T ss_dssp CCCCSSCTTCCHHHH-TTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHH
T ss_pred ccccCCCcEeChhhc-cCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHH
Confidence 344689999999988 455789999999999999999999999988765432211110 01 123467889999
Q ss_pred ccccccccccccc
Q 002321 922 RSCKGSSRQRRRF 934 (936)
Q Consensus 922 ~~l~~~p~~Rp~f 934 (936)
+||..||.+||+.
T Consensus 325 ~~L~~dp~~Rps~ 337 (373)
T 2x4f_A 325 KLLIKEKSWRISA 337 (373)
T ss_dssp TTSCSSGGGSCCH
T ss_pred HHcCCChhhCCCH
Confidence 9999999999985
No 130
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.4e-38 Score=358.43 Aligned_cols=236 Identities=22% Similarity=0.310 Sum_probs=195.5
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC-eeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS-LQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 767 (936)
...|+..+.||+|+||.||+|++. |+.||||+++... ..+.+.+|++++++++||||+++++++.... ..++|||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 345677789999999999999986 7899999997553 3577999999999999999999999987765 7899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++|+|.++++.... ..+++..+..++.|+++||+|||+++|+||||||+|||++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----
Confidence 9999999999987542 33789999999999999999999999999999999999999999999999999854321
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHH-----HHHHHhhhccccceee
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVT-----WLEEHWKKAEWRNVSM 921 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 921 (936)
.....+++.|+|||.+. ...++.++|||||||++|||++ |+.||............ ...+...+..+.+++.
T Consensus 343 -~~~~~~~~~y~aPE~~~-~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~ 420 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMK 420 (450)
T ss_dssp -----CCCTTTSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred -ccCCCCCcceeCHHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence 12235678899999984 4578999999999999999998 99999876553322111 0112334577899999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+|+
T Consensus 421 ~cl~~dp~~Rpt~~ 434 (450)
T 1k9a_A 421 NCWHLDAATRPTFL 434 (450)
T ss_dssp HHTCSSGGGSCCHH
T ss_pred HHcCCChhHCcCHH
Confidence 99999999999984
No 131
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=355.53 Aligned_cols=240 Identities=13% Similarity=0.124 Sum_probs=195.8
Q ss_pred cccccCCCcccccCceEEEEEE------eCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCC---CCCcceeeeEEEeC
Q 002321 689 HALLNKDCELGRGGFGAVYRTV------LRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR---HPNLVTLEGYYWTQ 759 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 759 (936)
...|...+.||+|+||+||+|+ ..+++.||||+++.. ...++.+|++++++++ |+||+++++++...
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 3456778899999999999994 346889999998644 3567888999988887 99999999999999
Q ss_pred CeeEEEEEecCCCChhhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC-----------C
Q 002321 760 SLQLLIYEFVSGGSLHKHLHEGS--GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG-----------S 826 (936)
Q Consensus 760 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~-----------~ 826 (936)
+..++||||+++|+|.+++.... ....+++.++..++.|+++||+|||++||+||||||+|||++. +
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------C
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccccc
Confidence 99999999999999999997532 2234999999999999999999999999999999999999998 8
Q ss_pred CCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH
Q 002321 827 GEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW 906 (936)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~ 906 (936)
+.+||+|||+|+.+.............||+.|+|||++. +..++.++||||+||++|||++|+.||.............
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~ 298 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS-NKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGL 298 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHT-TCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEECSC
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhc-CCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeechh
Confidence 999999999997654333333445567999999999984 4568999999999999999999999996654321111111
Q ss_pred HHHHhhhccccceeecccccccccccc
Q 002321 907 LEEHWKKAEWRNVSMRSCKGSSRQRRR 933 (936)
Q Consensus 907 ~~~~~~~~~~~~~~~~~l~~~p~~Rp~ 933 (936)
....+..+.|.+++.+|+..+|.+|+.
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~p~~r~~ 325 (365)
T 3e7e_A 299 FRRLPHLDMWNEFFHVMLNIPDCHHLP 325 (365)
T ss_dssp CTTCSSHHHHHHHHHHHHCCCCTTCCC
T ss_pred ccccCcHHHHHHHHHHHcCCCCCCcch
Confidence 122245678999999999999998853
No 132
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-37 Score=349.60 Aligned_cols=240 Identities=21% Similarity=0.289 Sum_probs=185.5
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc-cchHHHHHHHHHHHHcCC-CCCcceeeeEEEeCC--eeEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL-VKSQEDFEREVKKLGKVR-HPNLVTLEGYYWTQS--LQLL 764 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~l 764 (936)
..|+..+.||+|+||.||+|.+. +|+.||||++..... ......+.+|+.+++++. ||||+++++++...+ ..++
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 45777889999999999999976 689999999854322 234567889999999997 999999999997544 6799
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||++ |+|.++++... +++..+..++.|+++||+|||+.||+||||||+|||++.++.+||+|||+|+.+....
T Consensus 89 v~e~~~-~~L~~~~~~~~----~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRANI----LEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHHTC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999996 69999987642 8999999999999999999999999999999999999999999999999998653211
Q ss_pred -------------------cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHH
Q 002321 845 -------------------RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVT 905 (936)
Q Consensus 845 -------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~ 905 (936)
.........+|+.|+|||++.+...++.++||||+||++|||++|+.||.+.+........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 1112234578999999999866678999999999999999999999999886653222110
Q ss_pred HH-------------------------H--------------------------HHhhhccccceeeccccccccccccc
Q 002321 906 WL-------------------------E--------------------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 906 ~~-------------------------~--------------------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.. . +...++.+.+++.+||..||.+||+.
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 00 0 00224567899999999999999985
No 133
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=337.90 Aligned_cols=240 Identities=22% Similarity=0.259 Sum_probs=192.5
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-hHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-SQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
.|+..++||+|+||+||+|++. +|+.||||++....... ..+.+.+|++++++++||||+++++++.+....++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 3667789999999999999986 48999999986554332 256788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++++|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++....... .
T Consensus 84 ~~~~~l~~~~~~~~~---~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 158 (311)
T 4agu_A 84 CDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD--Y 158 (311)
T ss_dssp CSEEHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCchHHHHHhhhcC---CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc--c
Confidence 999999998876443 89999999999999999999999999999999999999999999999999987643222 2
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH---------H----------
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE---------E---------- 909 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~---------~---------- 909 (936)
.....+++.|+|||.+.+...++.++||||+||++|||++|+.||............... .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 234568889999999866667899999999999999999999999887653322111000 0
Q ss_pred ----------------HhhhccccceeecccccccccccccC
Q 002321 910 ----------------HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ----------------~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...+..+.+++.+||..||.+||+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 280 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCE 280 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHH
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHH
Confidence 01223466799999999999999863
No 134
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.2e-38 Score=345.20 Aligned_cols=246 Identities=21% Similarity=0.274 Sum_probs=202.4
Q ss_pred cccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
...|+..+.||+|+||.||+|++. +++.||||++...........+.+|++++++++||||+++++++.+....
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 455788889999999999999865 36789999997655445567799999999999999999999999998999
Q ss_pred EEEEEecCCCChhhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeecc
Q 002321 763 LLIYEFVSGGSLHKHLHEGS-------GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYG 835 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (936)
++||||+++|+|.+++.... ....+++..+++++.|++.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCc
Confidence 99999999999999987532 11337899999999999999999999999999999999999999999999999
Q ss_pred CccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HH
Q 002321 836 LARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EE 909 (936)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~ 909 (936)
+++...............+++.|+|||++. +..++.++||||+||++|||++ |+.||...+.......... .+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 262 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred cccccccccccccccCCCCCCCccChhhhc-cCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCC
Confidence 998664433333334455688899999884 4568999999999999999999 8999988765433322111 11
Q ss_pred HhhhccccceeecccccccccccccC
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...+..+.+++.+||..||.+||+++
T Consensus 263 ~~~~~~l~~li~~~l~~dp~~Rps~~ 288 (322)
T 1p4o_A 263 DNCPDMLFELMRMCWQYNPKMRPSFL 288 (322)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 23346688999999999999999863
No 135
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.2e-37 Score=337.80 Aligned_cols=241 Identities=31% Similarity=0.501 Sum_probs=197.3
Q ss_pred ccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCc---cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 692 LNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSL---VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 692 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
+...+.||+|+||.||+|+. +++.||||++..... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 111 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVY 111 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred cccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEe
Confidence 34557899999999999987 588999999865321 23357899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++|+|.+++........+++..+.+++.|++.||+|||++||+||||||+||+++.++.+||+|||+++..........
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 191 (307)
T 2nru_A 112 MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191 (307)
T ss_dssp CTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEE
T ss_pred cCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccccccccccc
Confidence 99999999997654445599999999999999999999999999999999999999999999999999987654333333
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH-H-HHHHH-----------------H
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF-S-VTWLE-----------------E 909 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~-~-~~~~~-----------------~ 909 (936)
.....+++.|+|||.+. + .++.++||||+|+++|||++|+.||......... . ..... +
T Consensus 192 ~~~~~g~~~y~aPE~~~-~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (307)
T 2nru_A 192 TSRIVGTTAYMAPEALR-G-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 269 (307)
T ss_dssp CSSCCSCGGGCCHHHHT-T-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCC
T ss_pred ccccCCCcCcCChHHhc-C-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccc
Confidence 44567899999999884 3 4789999999999999999999999875432110 0 00000 0
Q ss_pred HhhhccccceeecccccccccccccC
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
......+.+++.+||..||.+||+++
T Consensus 270 ~~~~~~l~~li~~cl~~~p~~Rps~~ 295 (307)
T 2nru_A 270 STSVEAMYSVASQCLHEKKNKRPDIK 295 (307)
T ss_dssp HHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 11234577899999999999999864
No 136
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=8.7e-38 Score=336.21 Aligned_cols=242 Identities=23% Similarity=0.285 Sum_probs=186.8
Q ss_pred cccccCCCcccccCceEEEEEEeCC----CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD----GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
...|+..+.||+|+||.||+|++.. +..||||+++........+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3457788899999999999999753 45799999876544445678999999999999999999999984 456789
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 999999999999997643 238999999999999999999999999999999999999999999999999998764322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhccccc
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWRN 918 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~ 918 (936)
. .......+++.|+|||.+ ....++.++||||+||++|||++ |..||.............. .+...++.+.+
T Consensus 171 ~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 248 (281)
T 1mp8_A 171 Y-YKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS 248 (281)
T ss_dssp ---------CCGGGCCHHHH-HHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred c-cccccCCCcccccChhhc-ccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 1 122334567789999988 45578999999999999999997 9999987665432211100 11223467889
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 249 li~~~l~~~p~~Rps~~ 265 (281)
T 1mp8_A 249 LMTKCWAYDPSRRPRFT 265 (281)
T ss_dssp HHHHHTCSSGGGSCCHH
T ss_pred HHHHHccCChhhCcCHH
Confidence 99999999999999874
No 137
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.8e-37 Score=338.00 Aligned_cols=232 Identities=22% Similarity=0.402 Sum_probs=174.8
Q ss_pred CCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CCCcceeeeEEEeCCeeEEEEEecCC
Q 002321 694 KDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HPNLVTLEGYYWTQSLQLLIYEFVSG 771 (936)
Q Consensus 694 ~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (936)
..+.||+|+||.||+|+.. +++.||||++... ....+.+|+.+++++. ||||+++++++.+....++||||+++
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 4578999999999999986 5899999998643 3567889999999997 99999999999999999999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC---CeEEeeccCccccCCCccccc
Q 002321 772 GSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG---EPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 772 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
|+|.+++..... +++.++..++.|++.||+|||++||+||||||+||+++.++ .+||+|||+++...... ..
T Consensus 91 ~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~ 165 (325)
T 3kn6_A 91 GELFERIKKKKH---FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QP 165 (325)
T ss_dssp CBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Cc
Confidence 999999987543 89999999999999999999999999999999999998766 89999999998654322 22
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhH-----HHHHHHHH--------H--Hhhh
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMW-----WFSVTWLE--------E--HWKK 913 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~-----~~~~~~~~--------~--~~~~ 913 (936)
.....+|+.|+|||++ ....++.++||||+||++|||++|+.||...+... ........ + ...+
T Consensus 166 ~~~~~~t~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 244 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELL-NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVS 244 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSC
T ss_pred ccccCCCcCccCHHHh-cCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCC
Confidence 2345678999999998 45578999999999999999999999998754311 01111100 1 2245
Q ss_pred ccccceeecccccccccccccC
Q 002321 914 AEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 914 ~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+.+++++.+||..||.+||+.+
T Consensus 245 ~~~~~li~~~L~~dP~~Rpt~~ 266 (325)
T 3kn6_A 245 QEAKDLIQGLLTVDPNKRLKMS 266 (325)
T ss_dssp HHHHHHHHHHHCCCTTTCCCTT
T ss_pred HHHHHHHHHHCCCChhHCCCHH
Confidence 6788999999999999999864
No 138
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=345.19 Aligned_cols=240 Identities=20% Similarity=0.302 Sum_probs=190.9
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCC--CCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRH--PNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|...+++.||||++...... ...+.+.+|+.++++++| +||+++++++.+....++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 457788899999999999999988999999999755433 234778999999999976 99999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
|+ .+++|.+++..... +++.++..++.|++.||+|||+++|+||||||+|||++ ++.+||+|||+++........
T Consensus 89 e~-~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 58899999987543 89999999999999999999999999999999999997 688999999999876543333
Q ss_pred cccccccCcccccCcccccC----------cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------H
Q 002321 847 VLSSKIQSALGYMAPEFACR----------TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------E 909 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~----------~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~ 909 (936)
.......||+.|+|||++.+ ...++.++||||+||++|||++|+.||............... +
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 243 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCc
Confidence 33445678999999998743 256889999999999999999999999875432222111111 1
Q ss_pred Hhhhccccceeeccccccccccccc
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
...+..+.+++.+||..||.+||++
T Consensus 244 ~~~~~~l~~li~~~L~~dp~~Rpt~ 268 (343)
T 3dbq_A 244 DIPEKDLQDVLKCCLKRDPKQRISI 268 (343)
T ss_dssp CCSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred ccCCHHHHHHHHHHcCCChhHCCCH
Confidence 2223467899999999999999986
No 139
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.7e-37 Score=335.23 Aligned_cols=245 Identities=24% Similarity=0.358 Sum_probs=204.3
Q ss_pred ccccccccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 684 FSTGTHALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 684 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
+.......|+..+.||+|+||.||+|+.. +++.||||++.........+.+.+|+.++++++||||+++++++.+....
T Consensus 16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 95 (303)
T 3a7i_A 16 LKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKL 95 (303)
T ss_dssp CEECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE
Confidence 33344556788889999999999999975 58999999997765555678899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
++||||+++++|.+++... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EEEEECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999999999998753 389999999999999999999999999999999999999999999999999976643
Q ss_pred CccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-----HHhhhcccc
Q 002321 843 LDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-----EHWKKAEWR 917 (936)
Q Consensus 843 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-----~~~~~~~~~ 917 (936)
.. .......+++.|+|||++. ...++.++||||+|+++|||++|+.||............... +...+..+.
T Consensus 172 ~~--~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (303)
T 3a7i_A 172 TQ--IKRNTFVGTPFWMAPEVIK-QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLK 248 (303)
T ss_dssp TB--CCBCCCCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHH
T ss_pred cc--cccCccCCCcCccCHHHHh-cCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHH
Confidence 22 2234456889999999984 457889999999999999999999999877654332211100 011235578
Q ss_pred ceeecccccccccccccC
Q 002321 918 NVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f~ 935 (936)
+++.+||..||.+||+++
T Consensus 249 ~li~~~l~~dp~~Rps~~ 266 (303)
T 3a7i_A 249 EFVEACLNKEPSFRPTAK 266 (303)
T ss_dssp HHHHHHCCSSGGGSCCHH
T ss_pred HHHHHHcCCChhhCcCHH
Confidence 899999999999999863
No 140
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.4e-37 Score=358.29 Aligned_cols=242 Identities=24% Similarity=0.293 Sum_probs=200.0
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.+ +|+.||||++...... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 44677788999999999999986 5899999999654322 23567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 767 EFVSGGSLHKHLHEGSG-GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
||++||+|.+++..... ...+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.+.....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 99999999999876432 23589999999999999999999999999999999999999999999999999987643221
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccch----hHHHHHHHH----HHHhhhcccc
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKM----MWWFSVTWL----EEHWKKAEWR 917 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~----~~~~~~~~~----~~~~~~~~~~ 917 (936)
......||+.|+|||++. +..++.++||||+||++|||++|+.||..... ......... .+...+..++
T Consensus 345 --~~~~~~GT~~Y~APE~l~-~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~~ 421 (543)
T 3c4z_A 345 --KTKGYAGTPGFMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421 (543)
T ss_dssp --CBCCCCSCTTTSCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred --ccccccCCccccChhhhc-CCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHHHH
Confidence 223457999999999984 45789999999999999999999999987532 111111110 1223456788
Q ss_pred ceeeccccccccccccc
Q 002321 918 NVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f 934 (936)
+++.+||..||.+||++
T Consensus 422 ~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 422 DFCEALLQKDPEKRLGF 438 (543)
T ss_dssp HHHHHHSCSSGGGSCCC
T ss_pred HHHHHhccCCHhHCCCC
Confidence 99999999999999986
No 141
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-37 Score=331.67 Aligned_cols=240 Identities=25% Similarity=0.353 Sum_probs=200.0
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEec
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFV 769 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (936)
..|+..+.||+|+||.||+|++.+++.||||++..... ..+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 44677788999999999999998889999999976543 3577999999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccccc
Q 002321 770 SGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLS 849 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 849 (936)
++++|.+++.... ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||+++..... .....
T Consensus 86 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHST
T ss_pred CCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccc-ccccc
Confidence 9999999997643 23889999999999999999999999999999999999999999999999999865432 12222
Q ss_pred ccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceeecc
Q 002321 850 SKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSMRS 923 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 923 (936)
....+++.|+|||++ ....++.++||||+|+++|||++ |+.||............. ..+...+..+.+++.+|
T Consensus 163 ~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~ 241 (267)
T 3t9t_A 163 TGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 241 (267)
T ss_dssp TSTTCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred ccccccccccChhhh-cCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHH
Confidence 344567789999988 44568999999999999999999 999998765533221110 01223456788999999
Q ss_pred cccccccccccC
Q 002321 924 CKGSSRQRRRFQ 935 (936)
Q Consensus 924 l~~~p~~Rp~f~ 935 (936)
|..||.+||+++
T Consensus 242 l~~~p~~Rps~~ 253 (267)
T 3t9t_A 242 WRERPEDRPAFS 253 (267)
T ss_dssp TCSSGGGSCCHH
T ss_pred ccCChhhCcCHH
Confidence 999999999864
No 142
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-37 Score=334.56 Aligned_cols=238 Identities=25% Similarity=0.349 Sum_probs=195.0
Q ss_pred CCCcccccCceEEEEEEeC---CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEecC
Q 002321 694 KDCELGRGGFGAVYRTVLR---DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFVS 770 (936)
Q Consensus 694 ~~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (936)
..+.||+|+||.||+|++. ++..||||+++........+.+.+|++++++++||||+++++++ ..+..++||||++
T Consensus 14 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~ 92 (287)
T 1u59_A 14 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAG 92 (287)
T ss_dssp EEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCT
T ss_pred hhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCC
Confidence 3348999999999999864 57889999997665445567899999999999999999999999 4556899999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc-ccc
Q 002321 771 GGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY-VLS 849 (936)
Q Consensus 771 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~ 849 (936)
+++|.+++.... ..+++.++.+++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 93 ~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (287)
T 1u59_A 93 GGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170 (287)
T ss_dssp TEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCC
T ss_pred CCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecc
Confidence 999999997533 23899999999999999999999999999999999999999999999999999876433222 222
Q ss_pred ccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhccccceeecc
Q 002321 850 SKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWRNVSMRS 923 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 923 (936)
....+++.|+|||++ ....++.++||||+||++|||++ |+.||...+.......... .+...++.+.+++.+|
T Consensus 171 ~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~ 249 (287)
T 1u59_A 171 SAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDC 249 (287)
T ss_dssp CSSCCCGGGCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred ccccccccccCHHHh-ccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHH
Confidence 334567889999988 44568999999999999999998 9999987665332211110 0123456788899999
Q ss_pred cccccccccccC
Q 002321 924 CKGSSRQRRRFQ 935 (936)
Q Consensus 924 l~~~p~~Rp~f~ 935 (936)
|..||.+||+++
T Consensus 250 l~~~p~~Rps~~ 261 (287)
T 1u59_A 250 WIYKWEDRPDFL 261 (287)
T ss_dssp TCSSGGGSCCHH
T ss_pred cCCChhhCcCHH
Confidence 999999999874
No 143
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.1e-37 Score=337.67 Aligned_cols=240 Identities=24% Similarity=0.287 Sum_probs=200.6
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-----hHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-----SQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
...|+..+.||+|+||.||+|+.. +|+.||||+++...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 445788889999999999999976 58999999997544322 367899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC----CeEEeeccCcc
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG----EPKVGDYGLAR 838 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a~ 838 (936)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++ .+||+|||+++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999999997643 389999999999999999999999999999999999999888 79999999998
Q ss_pred ccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHH--------HHHHH
Q 002321 839 LLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVT--------WLEEH 910 (936)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~--------~~~~~ 910 (936)
...... ......+++.|+|||++ ....++.++||||+||++|||++|+.||............ .....
T Consensus 168 ~~~~~~---~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 243 (321)
T 2a2a_A 168 EIEDGV---EFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243 (321)
T ss_dssp ECCTTC---CCCCCCSCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHT
T ss_pred ecCccc---cccccCCCCCccCcccc-cCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhc
Confidence 764322 22345689999999988 4557899999999999999999999999876543222110 01112
Q ss_pred hhhccccceeecccccccccccccC
Q 002321 911 WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 911 ~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..++.+.+++.+||..||.+||+.+
T Consensus 244 ~~~~~~~~li~~~l~~dp~~Rps~~ 268 (321)
T 2a2a_A 244 HTSELAKDFIRKLLVKETRKRLTIQ 268 (321)
T ss_dssp TCCHHHHHHHHTTSCSSTTTSCCHH
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHH
Confidence 3456788999999999999999863
No 144
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=7.6e-38 Score=359.42 Aligned_cols=241 Identities=26% Similarity=0.377 Sum_probs=193.2
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
...|+..++||+|+||.||+|+++++..||||+++.... ..+++.+|++++++++||||+++++++.+ ...++||||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 445677889999999999999998888899999976542 35789999999999999999999999876 668999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++|+|.++++.... ..+++.++..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 260 ~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~ 337 (452)
T 1fmk_A 260 MSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTA 337 (452)
T ss_dssp CTTCBHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred hcCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-eec
Confidence 999999999975321 238999999999999999999999999999999999999999999999999998764322 222
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceeec
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 922 (936)
.....+++.|+|||.+. ...++.++|||||||++|||++ |+.||............. ..+...++.+.+++.+
T Consensus 338 ~~~~~~~~~y~aPE~~~-~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~ 416 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 416 (452)
T ss_dssp -----CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHH
T ss_pred ccCCcccccccCHhHHh-cCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 23345678899999884 4478999999999999999999 999998766533221110 0022345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+|+
T Consensus 417 cl~~dP~~Rpt~~ 429 (452)
T 1fmk_A 417 CWRKEPEERPTFE 429 (452)
T ss_dssp HTCSSGGGSCCHH
T ss_pred HccCChhhCcCHH
Confidence 9999999999985
No 145
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8.8e-38 Score=358.89 Aligned_cols=238 Identities=23% Similarity=0.282 Sum_probs=190.3
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (936)
...|+..+.||+|+||.||+|+.. +|+.||||+++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 345788889999999999999976 589999999975422 22345678899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQ-SNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
|||+++|+|.+++..... +++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD- 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC-
Confidence 999999999999977543 8999999999999999999998 99999999999999999999999999999754322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH----HHhhhcccccee
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE----EHWKKAEWRNVS 920 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 920 (936)
........||+.|+|||++ .+..++.++||||+||++|||++|+.||...+........... +...++.+.+++
T Consensus 303 -~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li 380 (446)
T 4ejn_A 303 -GATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLL 380 (446)
T ss_dssp -----CCSSSCGGGCCHHHH-HTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred -CcccccccCCccccCHhhc-CCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence 2223456789999999998 4557899999999999999999999999887654333221111 223456788999
Q ss_pred eccccccccccc
Q 002321 921 MRSCKGSSRQRR 932 (936)
Q Consensus 921 ~~~l~~~p~~Rp 932 (936)
.+||..||.+||
T Consensus 381 ~~~L~~dP~~R~ 392 (446)
T 4ejn_A 381 SGLLKKDPKQRL 392 (446)
T ss_dssp HHHTCSSTTTST
T ss_pred HHHcccCHHHhC
Confidence 999999999998
No 146
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-37 Score=361.67 Aligned_cols=240 Identities=24% Similarity=0.286 Sum_probs=198.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.+ +|+.||||++..... ......+.+|++++++++||||+++++++.+....++||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 34677788999999999999986 689999999965432 223567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||++||+|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 264 Ey~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-- 340 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340 (576)
T ss_dssp CCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred EcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc--
Confidence 99999999999976542 238999999999999999999999999999999999999999999999999998764322
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh----HHHHHHHH----HHHhhhccccc
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM----WWFSVTWL----EEHWKKAEWRN 918 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~----~~~~~~~~----~~~~~~~~~~~ 918 (936)
......||+.|+|||++. +..++.++||||+||++|||++|+.||...... ........ .+...+..+++
T Consensus 341 -~~~~~~GT~~Y~APEvl~-~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~d 418 (576)
T 2acx_A 341 -TIKGRVGTVGYMAPEVVK-NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARS 418 (576)
T ss_dssp -CEECCCSCGGGCCHHHHT-TCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred -cccccCCCccccCHHHHc-CCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHH
Confidence 223457999999999984 456899999999999999999999999876431 11111110 01224567889
Q ss_pred eeeccccccccccccc
Q 002321 919 VSMRSCKGSSRQRRRF 934 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f 934 (936)
++.+||..||.+||++
T Consensus 419 LI~~lL~~dP~~R~g~ 434 (576)
T 2acx_A 419 LCSQLLCKDPAERLGC 434 (576)
T ss_dssp HHHHHTCSSGGGSTTC
T ss_pred HHHHhccCCHHHcCCC
Confidence 9999999999999953
No 147
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=342.67 Aligned_cols=243 Identities=24% Similarity=0.320 Sum_probs=191.6
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCc----EEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGR----PVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQL 763 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (936)
...|+..+.||+|+||.||+|++. +++ +||+|.+.........+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 445778889999999999999975 344 357787765555556788999999999999999999999998765 68
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 764 LIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
+|+||+++|+|.+++..... .+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 89999999999999986532 3899999999999999999999999999999999999999999999999999876544
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhcccc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWR 917 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~ 917 (936)
..........+++.|+|||.+. +..++.++||||+||++|||++ |+.||.............. .+...+..+.
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY 249 (327)
T ss_dssp ---------CCCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHH
T ss_pred cccccccCCCccccccCHHHHc-CCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHH
Confidence 3333334455678899999884 5578999999999999999999 9999988766433322111 1223446788
Q ss_pred ceeecccccccccccccC
Q 002321 918 NVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f~ 935 (936)
+++.+||..||.+||+++
T Consensus 250 ~li~~~l~~dp~~Rps~~ 267 (327)
T 3lzb_A 250 MIMRKCWMIDADSRPKFR 267 (327)
T ss_dssp HHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHcCCChhHCcCHH
Confidence 899999999999999874
No 148
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.5e-37 Score=347.26 Aligned_cols=243 Identities=15% Similarity=0.170 Sum_probs=189.7
Q ss_pred cccccCCCcccccCceEEEEEEeCC------CcEEEEEEeeccCccch----------HHHHHHHHHHHHcCCCCCccee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD------GRPVAIKKLTVSSLVKS----------QEDFEREVKKLGKVRHPNLVTL 752 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~h~niv~l 752 (936)
...|+..+.||+|+||.||+|.+++ ++.||||++........ ...+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4467888899999999999999764 47899999865432100 1234456677788899999999
Q ss_pred eeEEEeC----CeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc--CC
Q 002321 753 EGYYWTQ----SLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID--GS 826 (936)
Q Consensus 753 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~--~~ 826 (936)
++++... ...++||||+ +++|.+++.... ..+++.++..++.|++.||+|||+++|+||||||+|||++ .+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC
Confidence 9999764 4579999999 999999998743 2399999999999999999999999999999999999999 88
Q ss_pred CCeEEeeccCccccCCCccc-----cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh--
Q 002321 827 GEPKVGDYGLARLLPMLDRY-----VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM-- 899 (936)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~-- 899 (936)
+.+||+|||+++.+...... .......||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN-GVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 99999999999876432211 1123345899999999884 556899999999999999999999999864321
Q ss_pred HHHHH--HH-------HHH----HhhhccccceeecccccccccccccC
Q 002321 900 WWFSV--TW-------LEE----HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 900 ~~~~~--~~-------~~~----~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..... .+ ..+ ...+.++.+++.+||..||.+||+|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~ 318 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYE 318 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred HHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHH
Confidence 11111 00 011 12256789999999999999999974
No 149
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.7e-37 Score=342.06 Aligned_cols=237 Identities=28% Similarity=0.391 Sum_probs=195.4
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 44677788999999999999974 6899999999754322 23467899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||++ |++.+++.... ..+++.++..++.|+++||+|||+++|+||||||+||+++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~---- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---- 206 (348)
T ss_dssp ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC----
Confidence 9996 68888876433 2389999999999999999999999999999999999999999999999999976532
Q ss_pred cccccccCcccccCccccc--CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------HHhhhccccc
Q 002321 847 VLSSKIQSALGYMAPEFAC--RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------EHWKKAEWRN 918 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~ 918 (936)
.....+|+.|+|||++. ....++.++||||+||++|||++|+.||............... +...++.+++
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (348)
T 1u5q_A 207 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN 284 (348)
T ss_dssp --BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHH
T ss_pred --CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence 23456899999999874 2456899999999999999999999999876653322111100 1123456789
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 285 li~~~l~~dP~~Rps~~ 301 (348)
T 1u5q_A 285 FVDSCLQKIPQDRPTSE 301 (348)
T ss_dssp HHHHHTCSSGGGSCCHH
T ss_pred HHHHHcccChhhCcCHH
Confidence 99999999999999874
No 150
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2e-37 Score=341.55 Aligned_cols=238 Identities=14% Similarity=0.127 Sum_probs=194.2
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEEEEe
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
.|+..+.||+|+||+||+|+.. +++.||||++..... .+.+.+|+++++++ +||||+++++++......++||||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 4677789999999999999964 689999999865432 34588999999999 999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC-----eEEeeccCccccCCC
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE-----PKVGDYGLARLLPML 843 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~a~~~~~~ 843 (936)
+ +++|.+++.... ..+++.++..++.|++.||+|||+.||+||||||+||+++.++. +||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 L-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp C-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred C-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9 999999998642 24999999999999999999999999999999999999999887 999999999876432
Q ss_pred ccc-----cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH----HHHHHHHHH----
Q 002321 844 DRY-----VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW----FSVTWLEEH---- 910 (936)
Q Consensus 844 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~----~~~~~~~~~---- 910 (936)
... .......||+.|+|||++. +..++.++|||||||++|||++|+.||...+.... .........
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 242 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHL-GKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIE 242 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred CCCccccccccCCcCCCccccChHHHc-CCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHH
Confidence 221 1224567899999999984 55789999999999999999999999987543111 111111100
Q ss_pred -h--hhccccceeecccccccccccccC
Q 002321 911 -W--KKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 911 -~--~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
. ..+++.+++.+||..||.+||+++
T Consensus 243 ~~~~~~p~~~~li~~~l~~~p~~RP~~~ 270 (330)
T 2izr_A 243 VLCENFPEMATYLRYVRRLDFFEKPDYD 270 (330)
T ss_dssp HHTTTCHHHHHHHHHHHHCCTTCCCCHH
T ss_pred HHhccChHHHHHHHHHHhCCCCCCCCHH
Confidence 0 012889999999999999999874
No 151
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.1e-37 Score=332.88 Aligned_cols=238 Identities=26% Similarity=0.391 Sum_probs=196.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.. +++.||||++...... .....+.+|+.++++++||||+++++++.+....++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 88 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence 45677889999999999999976 4779999998654322 22567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++..... +++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~l~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~--- 162 (279)
T 3fdn_A 89 EYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--- 162 (279)
T ss_dssp CCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred ecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc---
Confidence 99999999999987543 899999999999999999999999999999999999999999999999998654322
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 922 (936)
......+++.|+|||.+ .+..++.++||||+|+++|||++|+.||...+......... ..+...++.+++++.+
T Consensus 163 -~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 240 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR 240 (279)
T ss_dssp ------CCCCTTCCHHHH-TTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHH
T ss_pred -cccccCCCCCccCHhHh-ccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHH
Confidence 22345688999999988 45578899999999999999999999998776543321111 1123345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 241 ~l~~~p~~Rps~~ 253 (279)
T 3fdn_A 241 LLKHNPSQRPMLR 253 (279)
T ss_dssp HCCSSGGGSCCHH
T ss_pred HhccChhhCCCHH
Confidence 9999999999863
No 152
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=347.87 Aligned_cols=239 Identities=18% Similarity=0.238 Sum_probs=199.0
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-------hHHHHHHHHHHHHcCCCCCcceeeeEEEeCC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-------SQEDFEREVKKLGKVRHPNLVTLEGYYWTQS 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (936)
...|+..+.||+|+||.||+|+.. +++.||||+++...... ..+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 356788889999999999999965 68999999997653211 2345778999999999999999999999999
Q ss_pred eeEEEEEecCCC-ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccc
Q 002321 761 LQLLIYEFVSGG-SLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARL 839 (936)
Q Consensus 761 ~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (936)
..++||||+.+| +|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 999999999777 99999986543 89999999999999999999999999999999999999999999999999987
Q ss_pred cCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHHHhhhccccce
Q 002321 840 LPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEEHWKKAEWRNV 919 (936)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (936)
..... ......||+.|+|||++.+...++.++||||+||++|||++|+.||......... ....+...+..+.++
T Consensus 180 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~l~~l 254 (335)
T 3dls_A 180 LERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEA--AIHPPYLVSKELMSL 254 (335)
T ss_dssp CCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTT--CCCCSSCCCHHHHHH
T ss_pred CCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhh--ccCCCcccCHHHHHH
Confidence 64322 2234568999999999865554588999999999999999999999875442111 111223345778999
Q ss_pred eecccccccccccccC
Q 002321 920 SMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 920 ~~~~l~~~p~~Rp~f~ 935 (936)
+.+||..||.+||+++
T Consensus 255 i~~~L~~dP~~Rps~~ 270 (335)
T 3dls_A 255 VSGLLQPVPERRTTLE 270 (335)
T ss_dssp HHHHTCSSGGGSCCHH
T ss_pred HHHHccCChhhCcCHH
Confidence 9999999999999863
No 153
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=6.3e-37 Score=330.65 Aligned_cols=238 Identities=26% Similarity=0.452 Sum_probs=194.7
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccch------HHHHHHHHHHHHcCCCCCcceeeeEEEeCCe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKS------QEDFEREVKKLGKVRHPNLVTLEGYYWTQSL 761 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (936)
...|+..+.||+|+||.||+|++. +++.||||++........ .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 345777889999999999999975 689999999865433222 167899999999999999999999987655
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCCEEEcCCCC-----eEEeec
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSN--IIHYNIKSSNVLIDGSGE-----PKVGDY 834 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--ivH~Dlkp~NIll~~~~~-----~kl~Df 834 (936)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 79999999999999887543 24899999999999999999999999 999999999999988876 999999
Q ss_pred cCccccCCCccccccccccCcccccCccccc-CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-----
Q 002321 835 GLARLLPMLDRYVLSSKIQSALGYMAPEFAC-RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE----- 908 (936)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~----- 908 (936)
|+++.... ......+++.|+|||.+. ....++.++||||+||++|||++|+.||...............
T Consensus 174 g~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 248 (287)
T 4f0f_A 174 GLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248 (287)
T ss_dssp TTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCC
T ss_pred Cccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCC
Confidence 99975432 223456889999999873 2345789999999999999999999999876654332222211
Q ss_pred ---HHhhhccccceeecccccccccccccC
Q 002321 909 ---EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ---~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+...++.+.+++.+||..||.+||+++
T Consensus 249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 278 (287)
T 4f0f_A 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFS 278 (287)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCcccCHHHHHHHHHHhcCChhhCcCHH
Confidence 122345688999999999999999874
No 154
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.1e-37 Score=330.85 Aligned_cols=239 Identities=23% Similarity=0.344 Sum_probs=198.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
..|+..++||+|+||.||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 45677889999999999999976 5899999999765433 335678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC---eEEeeccCccccCCCc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE---PKVGDYGLARLLPMLD 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~~~~~~ 844 (936)
|+++++|.+++..... +++.++..++.|++.||+|||+.||+||||||+||+++.++. +||+|||.+.......
T Consensus 86 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 86 LVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp CCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred cCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9999999988876543 899999999999999999999999999999999999987655 9999999997664322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------H--Hhhhccc
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------E--HWKKAEW 916 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~--~~~~~~~ 916 (936)
......+++.|+|||.+. ...++.++||||+|+++|+|++|+.||...+........... + ...++.+
T Consensus 163 ---~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T 3kk8_A 163 ---AWHGFAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238 (284)
T ss_dssp ---BCCCSCSCGGGCCHHHHT-TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred ---cccCCCCCcCCcCchhhc-CCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHH
Confidence 223456899999999984 557899999999999999999999999887654333211110 0 1234668
Q ss_pred cceeecccccccccccccC
Q 002321 917 RNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+++.+||..||.+||+.+
T Consensus 239 ~~li~~~l~~dp~~Rps~~ 257 (284)
T 3kk8_A 239 KSLIDSMLTVNPKKRITAD 257 (284)
T ss_dssp HHHHHHHSCSSTTTSCCHH
T ss_pred HHHHHHHcccChhhCCCHH
Confidence 8999999999999999863
No 155
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.7e-38 Score=340.23 Aligned_cols=243 Identities=25% Similarity=0.366 Sum_probs=191.5
Q ss_pred cccccCCCcccccCceEEEEEEeC-----CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeC--Ce
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-----DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ--SL 761 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 761 (936)
...|+..++||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 455778889999999999999842 58899999986543 23457799999999999999999999998653 45
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||+++|+|.+++..... .+++.++.+++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred eEEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 7999999999999999976532 38999999999999999999999999999999999999999999999999998764
Q ss_pred CCccc-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH--------------HHHH
Q 002321 842 MLDRY-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF--------------SVTW 906 (936)
Q Consensus 842 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~--------------~~~~ 906 (936)
..... .......++..|+|||.+. ...++.++||||+|+++|||++|..||......... ....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp ----------CTTCGGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhc-CCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 33221 2233445677899999884 457899999999999999999999998765332111 0011
Q ss_pred HH-------HHhhhccccceeecccccccccccccC
Q 002321 907 LE-------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 907 ~~-------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.. +...++.+.+++.+||..||.+||+++
T Consensus 245 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 280 (295)
T 3ugc_A 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 280 (295)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHH
Confidence 11 122346688899999999999999874
No 156
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-38 Score=349.06 Aligned_cols=242 Identities=23% Similarity=0.328 Sum_probs=186.5
Q ss_pred cccCCCcccccCceEEEEEEeCC----CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEe-CCeeEEE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLRD----GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWT-QSLQLLI 765 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 765 (936)
.|+..+.||+|+||.||+|++.+ +..||||.++........+++.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 45667789999999999998642 246899998765544557889999999999999999999999764 4577999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++|+|.++++... ..+++.+++.++.|+++||+|||+++|+||||||+||+++.++.+||+|||+++.......
T Consensus 170 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 99999999999997643 2378999999999999999999999999999999999999999999999999986543221
Q ss_pred c--cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhcccc
Q 002321 846 Y--VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWR 917 (936)
Q Consensus 846 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~ 917 (936)
. .......+++.|+|||.+. ...++.++|||||||++|||++ |..||............. ..+...+..+.
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~ 326 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQ-TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 326 (373)
T ss_dssp ----------CCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ccccccCCCCCcccccChHHhc-CCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 1 1223345678899999884 5578999999999999999999 788887765432221111 11234557789
Q ss_pred ceeecccccccccccccC
Q 002321 918 NVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f~ 935 (936)
+++.+||..||.+||+++
T Consensus 327 ~li~~cl~~dp~~RPs~~ 344 (373)
T 3c1x_A 327 EVMLKCWHPKAEMRPSFS 344 (373)
T ss_dssp HHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHcCCChhhCcCHH
Confidence 999999999999999874
No 157
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.5e-37 Score=340.45 Aligned_cols=246 Identities=27% Similarity=0.358 Sum_probs=201.3
Q ss_pred cccccCCCcccccCceEEEEEEe------CCCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCC-
Q 002321 689 HALLNKDCELGRGGFGAVYRTVL------RDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQS- 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~- 760 (936)
...|+..+.||+|+||.||+|++ .+++.||||+++........+.+.+|+++++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 44577888999999999999984 246899999997665444567899999999999 7999999999997654
Q ss_pred eeEEEEEecCCCChhhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSG-------------GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG 827 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~ 827 (936)
..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||++||+||||||+||+++.++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~ 185 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCC
Confidence 58999999999999999986543 12378999999999999999999999999999999999999999
Q ss_pred CeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH
Q 002321 828 EPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW 906 (936)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~ 906 (936)
.+||+|||+++...............+++.|+|||++. ...++.++||||+||++|||++ |+.||.............
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~ 264 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhhc-cccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence 99999999998765433333344556788999999884 4568999999999999999998 999998765432221111
Q ss_pred HH------HHhhhccccceeecccccccccccccC
Q 002321 907 LE------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 907 ~~------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.. +...++.+.+++.+||..||.+||+++
T Consensus 265 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 299 (316)
T 2xir_A 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299 (316)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred ccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 11 233456788999999999999999863
No 158
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.5e-38 Score=343.41 Aligned_cols=239 Identities=21% Similarity=0.315 Sum_probs=188.4
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEec
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFV 769 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (936)
.|...++||+|+||+||+|+.. +++.||||+++..........+.+|++++++++||||+++++++.+....++||||+
T Consensus 3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (324)
T 3mtl_A 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 82 (324)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccc
Confidence 3667788999999999999986 689999999965443222234568999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccccc
Q 002321 770 SGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLS 849 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 849 (936)
+ |+|.+++.... ..+++.++..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++...... ...
T Consensus 83 ~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~ 157 (324)
T 3mtl_A 83 D-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KTY 157 (324)
T ss_dssp S-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred c-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--ccc
Confidence 6 69999887653 248999999999999999999999999999999999999999999999999997654222 222
Q ss_pred ccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----------------------
Q 002321 850 SKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL---------------------- 907 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~---------------------- 907 (936)
....+++.|+|||++.+...++.++||||+||++|||++|+.||...+..........
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 3446789999999986666789999999999999999999999988765332211110
Q ss_pred ------------HHHhhhccccceeeccccccccccccc
Q 002321 908 ------------EEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 908 ------------~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.....++.+.+++.+||..||.+||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 276 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA 276 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCH
Confidence 001123456789999999999999985
No 159
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=337.76 Aligned_cols=238 Identities=24% Similarity=0.306 Sum_probs=190.1
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..++||+|+||+||+|++. +|+.||||++...... .......+|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 45788889999999999999987 6899999998654322 2334455666666555 8999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+ +++|.+++.... ..+++..+..++.|++.||+|||+.+|+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~-- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG-- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred ecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC--
Confidence 999 779999887654 238999999999999999999999999999999999999999999999999998664322
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHH---HHHHHHhhhccccceeecc
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSV---TWLEEHWKKAEWRNVSMRS 923 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 923 (936)
......||+.|+|||++. + .++.++||||+||++|||++|..||...+....... ....+...++.+.+++.+|
T Consensus 212 -~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 288 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQ-G-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMM 288 (311)
T ss_dssp ----CCCCCGGGCCGGGGG-T-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHH
T ss_pred -CCcccCCCccccCHhHhc-C-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHH
Confidence 234456899999999884 3 689999999999999999999777765433211110 1112233557889999999
Q ss_pred cccccccccccC
Q 002321 924 CKGSSRQRRRFQ 935 (936)
Q Consensus 924 l~~~p~~Rp~f~ 935 (936)
|..||.+||+++
T Consensus 289 L~~dP~~Rpt~~ 300 (311)
T 3p1a_A 289 LEPDPKLRATAE 300 (311)
T ss_dssp SCSSTTTSCCHH
T ss_pred cCCChhhCcCHH
Confidence 999999999863
No 160
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.7e-37 Score=338.53 Aligned_cols=241 Identities=18% Similarity=0.251 Sum_probs=200.8
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (936)
...|...+.||+|+||.||+|++. +++.||+|++...... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 456788889999999999999987 4789999998654322 3457789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++++|.+++..... +++.++..++.|+++||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred EecCCCCCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc-
Confidence 999999999999876543 8999999999999999999999999999999999999999999999999998764322
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccceee
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRNVSM 921 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 921 (936)
.......+++.|+|||++. ...++.++||||+||++|||++|+.||.............. .+...+..+.+++.
T Consensus 196 -~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (335)
T 2owb_A 196 -ERKKVLCGTPNYIAPEVLS-KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 273 (335)
T ss_dssp -CCBCCCCSCCSSCCHHHHH-TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHH
T ss_pred -ccccccCCCccccCHHHhc-cCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHH
Confidence 1223456889999999884 45689999999999999999999999987654332211110 11223466788999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+++
T Consensus 274 ~~l~~dp~~Rps~~ 287 (335)
T 2owb_A 274 KMLQTDPTARPTIN 287 (335)
T ss_dssp HHTCSSGGGSCCGG
T ss_pred HHccCChhHCcCHH
Confidence 99999999999975
No 161
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.5e-37 Score=340.50 Aligned_cols=240 Identities=18% Similarity=0.230 Sum_probs=189.5
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-hHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-SQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
...|+..++||+|+||+||+|+.. +++.||||+++...... ..+.+.+|++++++++||||+++++++.+....++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 345788889999999999999966 68999999997554322 2456789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc-----CCCCeEEeeccCccccC
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID-----GSGEPKVGDYGLARLLP 841 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~-----~~~~~kl~Dfg~a~~~~ 841 (936)
||++ |+|.+++..... +++.++..++.|++.||+|||+++|+||||||+||+++ .++.+||+|||+++...
T Consensus 113 e~~~-~~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp ECCS-EEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred ecCC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9997 699999987543 89999999999999999999999999999999999994 45569999999998664
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH--------------
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-------------- 907 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-------------- 907 (936)
... .......+|+.|+|||++.+...++.++||||+||++|||++|+.||..............
T Consensus 189 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 189 IPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp -------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred Ccc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 322 1223456789999999986666689999999999999999999999988765332211111
Q ss_pred --------------------HHHhhhccccceeeccccccccccccc
Q 002321 908 --------------------EEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 908 --------------------~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.+...++.+.+++.+||..||.+||+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 313 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISA 313 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCH
Confidence 111134566789999999999999985
No 162
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.8e-37 Score=328.79 Aligned_cols=238 Identities=24% Similarity=0.329 Sum_probs=196.5
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-----chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-----KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
.|+..+.||+|+||.||+|+.. +++.||||+++..... ...+.+.+|+.++++++||||+++++++.+....++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 4677789999999999999987 5899999999754332 136789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC----CeEEeeccCcccc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG----EPKVGDYGLARLL 840 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a~~~ 840 (936)
||||+++++|.+++..... +++.++..++.|++.||+|||++|++||||||+||+++.++ .+||+|||.++..
T Consensus 86 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999976443 89999999999999999999999999999999999999877 8999999999866
Q ss_pred CCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHH--------HHHHHhh
Q 002321 841 PMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVT--------WLEEHWK 912 (936)
Q Consensus 841 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~--------~~~~~~~ 912 (936)
.... ......+++.|+|||.+ ....++.++||||+|+++|||++|+.||............ .......
T Consensus 163 ~~~~---~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T 3bhy_A 163 EAGN---EFKNIFGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238 (283)
T ss_dssp C-----------CCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTC
T ss_pred cCCC---cccccCCCcCccCccee-cCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccC
Confidence 4322 22345688999999988 4557899999999999999999999999876553222110 1111234
Q ss_pred hccccceeecccccccccccccC
Q 002321 913 KAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 913 ~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
++.+.+++.+||..||.+||+++
T Consensus 239 ~~~~~~li~~~l~~dp~~Rps~~ 261 (283)
T 3bhy_A 239 SELAKDFIRRLLVKDPKRRMTIA 261 (283)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHH
T ss_pred CHHHHHHHHHHccCCHhHCcCHH
Confidence 56788999999999999999863
No 163
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.1e-37 Score=333.26 Aligned_cols=242 Identities=25% Similarity=0.395 Sum_probs=184.4
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..++||+|+||+||+|++. ..||||+++..... ...+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 445677889999999999999865 36999999765433 3357789999999999999999999976 4556799999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++++|.+++.... ..+++.++++++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++.........
T Consensus 100 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 100 WCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred ecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 999999999996543 238999999999999999999999999999999999999999999999999997654333333
Q ss_pred ccccccCcccccCccccc--CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHH----------Hhhhcc
Q 002321 848 LSSKIQSALGYMAPEFAC--RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEE----------HWKKAE 915 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~----------~~~~~~ 915 (936)
......+++.|+|||.+. ....++.++||||+|+++|||++|+.||................ ...++.
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 257 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHH
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHH
Confidence 334456899999999874 24467889999999999999999999998765432221111111 122356
Q ss_pred ccceeecccccccccccccC
Q 002321 916 WRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+.+++.+||..||.+||+++
T Consensus 258 l~~li~~~l~~~p~~Rps~~ 277 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFP 277 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHHccCChhhCCCHH
Confidence 78899999999999999874
No 164
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.4e-37 Score=332.02 Aligned_cols=239 Identities=14% Similarity=0.136 Sum_probs=195.9
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 767 (936)
..|+..+.||+|+||.||+|+.. +++.||||++..... .+.+.+|+++++++ +|++++++++++.+....++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 34677889999999999999964 689999999865432 34578999999999 79999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC-----eEEeeccCccccCC
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE-----PKVGDYGLARLLPM 842 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfg~a~~~~~ 842 (936)
|+ +++|.+++.... ..+++.++.+++.|++.||+|||++||+||||||+||+++.++. +||+|||+++....
T Consensus 87 ~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp CC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred ec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 99 999999998653 23899999999999999999999999999999999999988776 99999999987653
Q ss_pred Cccc-----cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh---HH-HHHH-HHH----
Q 002321 843 LDRY-----VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM---WW-FSVT-WLE---- 908 (936)
Q Consensus 843 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~---~~-~~~~-~~~---- 908 (936)
.... .......+|+.|+|||.+ .+..++.++||||+||++|||++|+.||...+.. .. .... ...
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTH-LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHH-TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred ccccccccccCccCCCCCcccCCchhh-cCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 3221 123456689999999998 4556899999999999999999999999875421 11 1110 000
Q ss_pred H---HhhhccccceeecccccccccccccC
Q 002321 909 E---HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ~---~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+ ...++.+.+++.+||..||.+||+++
T Consensus 243 ~~~~~~~~~~l~~li~~~l~~dp~~RP~~~ 272 (298)
T 1csn_A 243 RELCAGFPEEFYKYMHYARNLAFDATPDYD 272 (298)
T ss_dssp HHHTTTSCHHHHHHHHHHHHCCTTCCCCHH
T ss_pred HHHHhhCcHHHHHHHHHHhcCCcccCCCHH
Confidence 1 12356789999999999999999874
No 165
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1e-36 Score=330.13 Aligned_cols=241 Identities=18% Similarity=0.251 Sum_probs=200.4
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (936)
...|...+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 345778889999999999999987 4789999998654322 3456789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++++|.+++..... +++.++..++.|+++||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 169 (294)
T ss_dssp EECCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred EecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc-
Confidence 999999999999876543 8999999999999999999999999999999999999999999999999998764322
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccceee
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRNVSM 921 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 921 (936)
.......+++.|+|||.+ ....++.++||||+|+++|||++|+.||.............. .+...+..+.+++.
T Consensus 170 -~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 247 (294)
T 2rku_A 170 -ERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 247 (294)
T ss_dssp -CCBCCCCSCCSSCCHHHH-TTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHH
T ss_pred -cccccccCCCCcCCcchh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHH
Confidence 123345688999999988 455689999999999999999999999988665322211100 01223456788999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+++
T Consensus 248 ~~l~~~p~~Rps~~ 261 (294)
T 2rku_A 248 KMLQTDPTARPTIN 261 (294)
T ss_dssp HHTCSSGGGSCCGG
T ss_pred HHcccChhhCcCHH
Confidence 99999999999875
No 166
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.5e-37 Score=340.41 Aligned_cols=242 Identities=24% Similarity=0.349 Sum_probs=194.4
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHH-HHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKK-LGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
..|+..+.||+|+||.||+|+.. +|+.||||+++.........++..|..+ ++.++||||+++++++.+.+..++|||
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 45677788999999999999975 6899999999765544455666666666 777899999999999999999999999
Q ss_pred ecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 768 FVSGGSLHKHLHEG-SGGNFLSWNERFNVIQGTAKSLAHLHQS-NIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 768 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|++ |+|.+++... .....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 131 ~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-- 207 (340)
T 3an0_A 131 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS-- 207 (340)
T ss_dssp CCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH--
T ss_pred Hhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc--
Confidence 997 5998888642 1123489999999999999999999987 9999999999999999999999999999866422
Q ss_pred ccccccccCcccccCccccc---CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhcc
Q 002321 846 YVLSSKIQSALGYMAPEFAC---RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAE 915 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~ 915 (936)
.......+++.|+|||++. ....++.++||||+||++|||++|+.||............... ....+..
T Consensus 208 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (340)
T 3an0_A 208 -VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAE 286 (340)
T ss_dssp -HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHH
T ss_pred -cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCCHH
Confidence 1223356899999999863 2346889999999999999999999999875432222111111 1223567
Q ss_pred ccceeecccccccccccccC
Q 002321 916 WRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+.+++.+||..||.+||+++
T Consensus 287 ~~~li~~~l~~dp~~Rps~~ 306 (340)
T 3an0_A 287 FVDFTSQCLKKNSKERPTYP 306 (340)
T ss_dssp HHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHHccCCcccCcCHH
Confidence 88999999999999999874
No 167
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.2e-37 Score=329.92 Aligned_cols=236 Identities=28% Similarity=0.390 Sum_probs=185.4
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc---chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV---KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|++. ++.||||+++..... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 34677789999999999999986 899999998654322 23467899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCCCCEEEcC--------CCCeEEeecc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSN---IIHYNIKSSNVLIDG--------SGEPKVGDYG 835 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---ivH~Dlkp~NIll~~--------~~~~kl~Dfg 835 (936)
||+++++|.+++... .+++..+..++.|+++||+|||+++ |+||||||+||+++. ++.+||+|||
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999998643 3899999999999999999999999 899999999999986 7789999999
Q ss_pred CccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------H
Q 002321 836 LARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------E 909 (936)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~ 909 (936)
+++...... .....+++.|+|||.+ .+..++.++||||+|+++|||++|+.||...+........... +
T Consensus 162 ~~~~~~~~~----~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (271)
T 3dtc_A 162 LAREWHRTT----KMSAAGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236 (271)
T ss_dssp C-----------------CCGGGSCHHHH-HHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC
T ss_pred ccccccccc----ccCCCCccceeCHHHh-ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC
Confidence 998654322 2245688999999988 4557899999999999999999999999887654332211111 1
Q ss_pred HhhhccccceeecccccccccccccC
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...++.+.+++.+||..||.+||+++
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~ 262 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFT 262 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHH
Confidence 23346688999999999999999874
No 168
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.9e-37 Score=341.38 Aligned_cols=248 Identities=23% Similarity=0.294 Sum_probs=196.8
Q ss_pred cccccccCCCcccccCceEEEEEEeC------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC
Q 002321 687 GTHALLNKDCELGRGGFGAVYRTVLR------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS 760 (936)
Q Consensus 687 ~~~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (936)
.....|+..+.||+|+||.||+|++. +++.||||++..........++.+|+.++++++||||+++++++.+..
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 34556788889999999999999842 477899999975544455678999999999999999999999999998
Q ss_pred eeEEEEEecCCCChhhhhhccCCC----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC---CCeEEee
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSGG----NFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS---GEPKVGD 833 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~D 833 (936)
..++||||+++|+|.+++...... ..+++.+++.++.|++.||+|||+.||+||||||+||+++.+ ..+||+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~D 186 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 186 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECc
Confidence 999999999999999999865421 348899999999999999999999999999999999999954 4699999
Q ss_pred ccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----
Q 002321 834 YGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL----- 907 (936)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~----- 907 (936)
||+++...............+++.|+|||.+. ...++.++||||+||++|||++ |+.||..............
T Consensus 187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 2yfx_A 187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD 265 (327)
T ss_dssp CHHHHHHHC------CCGGGSCGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred cccccccccccccccCCCcCCCcceeCHhHhc-CCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCC
Confidence 99997654333333334456788999999884 4568999999999999999998 9999987655332211110
Q ss_pred HHHhhhccccceeecccccccccccccC
Q 002321 908 EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 908 ~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+...+..+.+++.+||..||.+||+++
T Consensus 266 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ 293 (327)
T 2yfx_A 266 PPKNCPGPVYRIMTQCWQHQPEDRPNFA 293 (327)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 1123346688999999999999999864
No 169
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=335.25 Aligned_cols=235 Identities=25% Similarity=0.399 Sum_probs=187.1
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
...|+..+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 345677889999999999999986 789999998643 345789999999999999999999998864 46899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCCCCEEEcCCCC-eEEeeccCccccCCCc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQ---SNIIHYNIKSSNVLIDGSGE-PKVGDYGLARLLPMLD 844 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a~~~~~~~ 844 (936)
+++|+|.+++........+++..+++++.|+++||+|||+ +||+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 9999999999876544457899999999999999999999 89999999999999998886 799999999755321
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhcccc
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAEWR 917 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~ 917 (936)
.....+++.|+|||++. +..++.++||||+||++|||++|+.||............... ....+..+.
T Consensus 160 ----~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIE 234 (307)
T ss_dssp ---------CCTTSSCHHHHT-CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHH
T ss_pred ----cccCCCCCceEChhhhC-CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHH
Confidence 12345889999999984 557899999999999999999999999865432221111111 112345678
Q ss_pred ceeecccccccccccccC
Q 002321 918 NVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f~ 935 (936)
+++.+||..||.+||+++
T Consensus 235 ~li~~~l~~dp~~Rps~~ 252 (307)
T 2eva_A 235 SLMTRCWSKDPSQRPSME 252 (307)
T ss_dssp HHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHhcCChhhCcCHH
Confidence 899999999999999864
No 170
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=351.38 Aligned_cols=244 Identities=25% Similarity=0.290 Sum_probs=198.3
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC--eeEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS--LQLLI 765 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 765 (936)
...|...+.||+|+||+||+|++. +|+.||||+++........+.+.+|++++++++||||+++++++.+.. ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 345788889999999999999987 489999999976655556778899999999999999999999998765 67999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE----cCCCCeEEeeccCccccC
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI----DGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg~a~~~~ 841 (936)
|||+++|+|.+++........+++.+++.++.|++.||+|||+.||+||||||+||++ +.++.+||+|||+++...
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999999876544458999999999999999999999999999999999999 778889999999998764
Q ss_pred CCccccccccccCcccccCcccccC-------cccCCchhhHHHHHHHHHHHHcCCCCCCccchh---HHHHHHHHHH--
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACR-------TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM---WWFSVTWLEE-- 909 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~---~~~~~~~~~~-- 909 (936)
... ......+++.|+|||++.. ...++.++||||+||++|||++|+.||...... ..........
T Consensus 168 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 168 DDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred CCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 322 2234568999999998743 146788999999999999999999999753321 0111111110
Q ss_pred ----------------------------HhhhccccceeecccccccccccccC
Q 002321 910 ----------------------------HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ----------------------------~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
......+.+++.+||..||.+||+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~ 298 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHH
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHH
Confidence 11234567888999999999999874
No 171
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=9.9e-37 Score=327.28 Aligned_cols=237 Identities=19% Similarity=0.267 Sum_probs=198.6
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||.||+|+.. ++..||+|++..... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 345778889999999999999976 477999999865432 346789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE---cCCCCeEEeeccCccccCCCc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI---DGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
|+++++|.+++..... +++.++.+++.|++.||+|||++||+||||||+||++ +.++.+||+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 87 LCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred ccCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 9999999998876543 8999999999999999999999999999999999999 788999999999998664322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH------HHH--Hhhhccc
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW------LEE--HWKKAEW 916 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~------~~~--~~~~~~~ 916 (936)
......+++.|+|||.+. + .++.++||||+|+++|||++|+.||...+......... ... ...++.+
T Consensus 164 ---~~~~~~~t~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSPQVLE-G-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQA 238 (277)
T ss_dssp ---CBCCCCSCTTTCCHHHHT-T-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHH
T ss_pred ---chhccCCCCCccChHHhc-c-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHH
Confidence 234456899999999884 3 38999999999999999999999998866533221111 001 1245678
Q ss_pred cceeeccccccccccccc
Q 002321 917 RNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f 934 (936)
.+++.+||..||.+||+.
T Consensus 239 ~~li~~~l~~dp~~R~s~ 256 (277)
T 3f3z_A 239 ESLIRRLLTKSPKQRITS 256 (277)
T ss_dssp HHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHHccCChhhCcCH
Confidence 899999999999999985
No 172
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-36 Score=339.90 Aligned_cols=200 Identities=23% Similarity=0.266 Sum_probs=173.6
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-----CCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-----HPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~~~ 762 (936)
...|+..++||+|+||+||+|+.. +++.||||+++.. ......+.+|+.++++++ ||||+++++++...+..
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 345788889999999999999985 5889999998643 234567788999999996 99999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC-----------------
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG----------------- 825 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~----------------- 825 (936)
++||||+ +++|.+++...... .+++.++..++.|++.||+|||++||+||||||+|||++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~ 189 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNYN-GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGK 189 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred EEEEcCC-CCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccc
Confidence 9999999 99999999875432 3899999999999999999999999999999999999975
Q ss_pred --------CCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccc
Q 002321 826 --------SGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWK 897 (936)
Q Consensus 826 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~ 897 (936)
++.+||+|||+++..... .....+|+.|+|||++. +..++.++||||+||++|||++|+.||...+
T Consensus 190 ~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 190 KIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp EEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHc-CCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence 789999999999865332 23456899999999984 4578999999999999999999999998765
Q ss_pred h
Q 002321 898 M 898 (936)
Q Consensus 898 ~ 898 (936)
.
T Consensus 264 ~ 264 (360)
T 3llt_A 264 H 264 (360)
T ss_dssp H
T ss_pred H
Confidence 4
No 173
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.1e-37 Score=328.71 Aligned_cols=240 Identities=21% Similarity=0.316 Sum_probs=192.1
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|...+.||+|+||.||+|++. +|+.||||++..... ....+.+.+|+.++++++||||+++++++.+....++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 34677789999999999999986 689999999865432 123567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++++|.+++..... +++.++..++.|++.||+|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp ECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 99999999999977543 8999999999999999999999999999999999999999999999999998654322
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 922 (936)
......+++.|+|||.+.+....+.++||||+|+++|||++|+.||...+.......... .+...+..+.+++.+
T Consensus 166 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 244 (276)
T 2h6d_A 166 -FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 244 (276)
T ss_dssp ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred -ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHH
Confidence 223456788999999986554457899999999999999999999987655332211110 122345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 245 ~l~~~p~~Rps~~ 257 (276)
T 2h6d_A 245 MLQVDPLKRATIK 257 (276)
T ss_dssp HTCSSGGGSCCHH
T ss_pred HccCChhhCCCHH
Confidence 9999999999863
No 174
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-37 Score=339.27 Aligned_cols=242 Identities=26% Similarity=0.385 Sum_probs=191.1
Q ss_pred cccCCCcccccCceEEEEEEeCC-----CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLRD-----GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (936)
.|+..+.||+|+||.||+|+... +..||||+++..........+.+|++++++++||||+++++++.+....++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 45667789999999999998653 2359999997655444567899999999999999999999999998999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++|+|.+++.... ..+++.+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 125 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 125 TEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 99999999999997643 2389999999999999999999999999999999999999999999999999987643221
Q ss_pred -ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhccccc
Q 002321 846 -YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWRN 918 (936)
Q Consensus 846 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~ 918 (936)
........+++.|+|||.+. ...++.++||||+||++|||++ |+.||.............. .+...+..+.+
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 281 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQ 281 (333)
T ss_dssp --------CCCGGGSCHHHHH-SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHH
T ss_pred cccccCCCCccccccCchhcc-cCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHH
Confidence 11222334577899999884 4578999999999999999999 9999987665332211110 01223467889
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 282 li~~~l~~~p~~Rps~~ 298 (333)
T 1mqb_A 282 LMMQCWQQERARRPKFA 298 (333)
T ss_dssp HHHHHTCSSTTTSCCHH
T ss_pred HHHHHcCCChhhCcCHH
Confidence 99999999999999874
No 175
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-37 Score=342.67 Aligned_cols=246 Identities=22% Similarity=0.256 Sum_probs=194.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc----cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL----VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQL 763 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (936)
...|+..+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++||||+++++++.+....+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 455788889999999999999975 588999999865421 234578999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccC-------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 002321 764 LIYEFVSGGSLHKHLHEGS-------------------------------------GGNFLSWNERFNVIQGTAKSLAHL 806 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~-------------------------------------~~~~~~~~~~~~i~~~i~~al~~L 806 (936)
+||||+++|+|.+++.... ....+++..+..++.|++.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985210 011245777889999999999999
Q ss_pred HhCCcccCCCCCCCEEEcCCC--CeEEeeccCccccCCCc--cccccccccCcccccCcccccC-cccCCchhhHHHHHH
Q 002321 807 HQSNIIHYNIKSSNVLIDGSG--EPKVGDYGLARLLPMLD--RYVLSSKIQSALGYMAPEFACR-TVKITDKCDVYGFGV 881 (936)
Q Consensus 807 H~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DvwSlG~ 881 (936)
|+++|+||||||+||+++.++ .+||+|||+++.+.... .........+++.|+|||++.+ ...++.++||||+||
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 999999999999999998777 89999999998653322 1122345668999999998853 256889999999999
Q ss_pred HHHHHHcCCCCCCccchhHHHHHHHHH------HH--hhhccccceeeccccccccccccc
Q 002321 882 LVLEVVTGKRPLSTWKMMWWFSVTWLE------EH--WKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 882 ~l~el~~g~~Pf~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
++|||++|+.||............... +. ..++.+.+++.+||..||.+||+.
T Consensus 265 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCH
Confidence 999999999999887654332211111 11 135678899999999999999986
No 176
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-36 Score=333.86 Aligned_cols=240 Identities=25% Similarity=0.335 Sum_probs=195.9
Q ss_pred cccCCCcccccCceEEEEEEeC-----CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeC--CeeE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-----DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ--SLQL 763 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 763 (936)
.|+..++||+|+||+||++.++ +++.||||+++........+.+.+|++++++++||||+++++++.+. ...+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 3477889999999999998753 58899999997665445567899999999999999999999999874 5778
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 764 LIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
+||||+++|+|.+++.... +++.+++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 112 lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 9999999999999997654 899999999999999999999999999999999999999999999999999876543
Q ss_pred ccc-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH----------HHHHHH----
Q 002321 844 DRY-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF----------SVTWLE---- 908 (936)
Q Consensus 844 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~----------~~~~~~---- 908 (936)
... .......+++.|+|||.+. ...++.++||||+||++|||++|+.||......... ......
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLK-EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred ccccccccCCCCCceeeChHHhc-CCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 321 2234456788899999884 456889999999999999999999999765432111 000000
Q ss_pred ------HHhhhccccceeecccccccccccccC
Q 002321 909 ------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+...+..+.+++.+||..||.+||+++
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 299 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFE 299 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHH
Confidence 112345688999999999999999874
No 177
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=366.05 Aligned_cols=235 Identities=26% Similarity=0.347 Sum_probs=190.6
Q ss_pred cccccCceEEEEEEeC---CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEecCCCC
Q 002321 697 ELGRGGFGAVYRTVLR---DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFVSGGS 773 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 773 (936)
+||+|+||.||+|.++ ++..||||+++........+++.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999875 4567999999766545567889999999999999999999999976 55899999999999
Q ss_pred hhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc-ccccccc
Q 002321 774 LHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR-YVLSSKI 852 (936)
Q Consensus 774 L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~ 852 (936)
|.+++.... ..+++.++..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....... .......
T Consensus 422 L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 999997543 3489999999999999999999999999999999999999999999999999987643222 1122233
Q ss_pred cCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceeeccccc
Q 002321 853 QSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSMRSCKG 926 (936)
Q Consensus 853 ~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~ 926 (936)
.+++.|+|||++ ....++.++|||||||++|||++ |+.||...+......... ..+...+..+.+++.+||..
T Consensus 500 ~~~~~y~APE~~-~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~ 578 (613)
T 2ozo_A 500 KWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIY 578 (613)
T ss_dssp --CCTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCS
T ss_pred CCccceeCHhhh-cCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 456789999998 45578999999999999999998 999998876543221110 01223457889999999999
Q ss_pred ccccccccC
Q 002321 927 SSRQRRRFQ 935 (936)
Q Consensus 927 ~p~~Rp~f~ 935 (936)
||.+||+|+
T Consensus 579 dP~~RPs~~ 587 (613)
T 2ozo_A 579 KWEDRPDFL 587 (613)
T ss_dssp STTTSCCHH
T ss_pred ChhHCcCHH
Confidence 999999984
No 178
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.7e-37 Score=336.13 Aligned_cols=244 Identities=24% Similarity=0.332 Sum_probs=194.4
Q ss_pred cccccCCCcccccCceEEEEEEe-----CCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeC--Ce
Q 002321 689 HALLNKDCELGRGGFGAVYRTVL-----RDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ--SL 761 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 761 (936)
...|+..++||+|+||.||+|++ .+++.||||+++........+.+.+|++++++++||||+++++++.+. ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 44577888999999999999984 358899999997665555568899999999999999999999999876 56
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||+++|+|.+++..... .+++.+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 7899999999999999965432 38999999999999999999999999999999999999999999999999998765
Q ss_pred CCccc-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH------------H-HHHHH
Q 002321 842 MLDRY-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW------------F-SVTWL 907 (936)
Q Consensus 842 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~------------~-~~~~~ 907 (936)
..... .......++..|+|||.+. ...++.++||||+||++|||++|..|+........ . .....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLM-QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeec-CCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 43322 2334456788899999884 44678999999999999999999998754321100 0 01111
Q ss_pred H-------HHhhhccccceeecccccccccccccC
Q 002321 908 E-------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 908 ~-------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
. +...++.+.+++.+||..||.+||+++
T Consensus 257 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 291 (302)
T 4e5w_A 257 KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQ 291 (302)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHH
Confidence 1 112335688999999999999999874
No 179
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.9e-37 Score=333.95 Aligned_cols=238 Identities=23% Similarity=0.288 Sum_probs=186.6
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHc--CCCCCcceeeeEEEeC----Cee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGK--VRHPNLVTLEGYYWTQ----SLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~ 762 (936)
...|+..+.||+|+||+||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++.+. ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 34567788999999999999998 5899999998643 34556667776666 7999999999997653 457
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCcccCCCCCCCEEEcCCCCeEEeec
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLH--------QSNIIHYNIKSSNVLIDGSGEPKVGDY 834 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH--------~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (936)
++||||+++|+|.++++.. .+++..+.+++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 82 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence 8999999999999999653 3899999999999999999999 999999999999999999999999999
Q ss_pred cCccccCCCccc--cccccccCcccccCcccccCcc-----cCCchhhHHHHHHHHHHHHcC----------CCCCCccc
Q 002321 835 GLARLLPMLDRY--VLSSKIQSALGYMAPEFACRTV-----KITDKCDVYGFGVLVLEVVTG----------KRPLSTWK 897 (936)
Q Consensus 835 g~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DvwSlG~~l~el~~g----------~~Pf~~~~ 897 (936)
|+++........ .......+|+.|+|||++.+.. .++.++||||+||++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 999765432221 1123347899999999885442 345799999999999999999 88986643
Q ss_pred hhH--HHHHHHHH--------------HHhhhccccceeecccccccccccccC
Q 002321 898 MMW--WFSVTWLE--------------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 898 ~~~--~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
... ........ +...++.+.+++.+||..||.+||+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 291 (301)
T 3q4u_A 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTAL 291 (301)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHH
Confidence 211 11111000 011235678899999999999999864
No 180
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.8e-37 Score=333.75 Aligned_cols=238 Identities=23% Similarity=0.307 Sum_probs=194.0
Q ss_pred cccccCCCcccccCceEEEEEEeCC-C-------cEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD-G-------RPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (936)
...|...+.||+|+||.||+|+... + ..||+|++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 4457778899999999999998663 3 479999986543 344678999999999999999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC--------eEEe
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE--------PKVG 832 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~--------~kl~ 832 (936)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++|+||||||+||+++.++. +||+
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999998643 23889999999999999999999999999999999999998887 9999
Q ss_pred eccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcC-CCCCCccchhHHHHHHHHH---
Q 002321 833 DYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTG-KRPLSTWKMMWWFSVTWLE--- 908 (936)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g-~~Pf~~~~~~~~~~~~~~~--- 908 (936)
|||++...... ....+++.|+|||.+.+...++.++||||+||++|||++| ..||...+...........
T Consensus 164 Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (289)
T 4fvq_A 164 DPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237 (289)
T ss_dssp CCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC
T ss_pred cCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCC
Confidence 99999754321 2344678899999986556789999999999999999995 5555554443222111111
Q ss_pred HHhhhccccceeecccccccccccccC
Q 002321 909 EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+...++.+.+++.+||..||.+||+++
T Consensus 238 ~~~~~~~l~~li~~~l~~dp~~Rps~~ 264 (289)
T 4fvq_A 238 PAPKAAELANLINNCMDYEPDHRPSFR 264 (289)
T ss_dssp CCCSSCTTHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHH
Confidence 222356789999999999999999874
No 181
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6e-37 Score=353.55 Aligned_cols=203 Identities=20% Similarity=0.263 Sum_probs=158.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc-cchHHHHHHHHHHHHcCCCCCcceeeeEEEeC-----Cee
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL-VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ-----SLQ 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 762 (936)
..|+..+.||+|+||+||+|++. +++.||||++..... ....+++.+|++++++++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 45788899999999999999976 689999999865322 23457789999999999999999999998543 467
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
++||||+ +|+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+|+....
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEecc-ccchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 9999998 589999987654 389999999999999999999999999999999999999999999999999987642
Q ss_pred Cccc-------------------------cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc---------
Q 002321 843 LDRY-------------------------VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT--------- 888 (936)
Q Consensus 843 ~~~~-------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~--------- 888 (936)
.... .......+|+.|+|||++.....++.++||||+||++|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 2111 112345679999999987666679999999999999999999
Q ss_pred --CCCCCCcc
Q 002321 889 --GKRPLSTW 896 (936)
Q Consensus 889 --g~~Pf~~~ 896 (936)
|++||.+.
T Consensus 289 ~~~~p~f~g~ 298 (458)
T 3rp9_A 289 ADRGPLFPGS 298 (458)
T ss_dssp GGCCCSCC--
T ss_pred ccccccCCCC
Confidence 66666553
No 182
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=332.37 Aligned_cols=239 Identities=22% Similarity=0.270 Sum_probs=191.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc----chHHHHHHHHHHHHcCC---CCCcceeeeEEEeCC-
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV----KSQEDFEREVKKLGKVR---HPNLVTLEGYYWTQS- 760 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~- 760 (936)
..|+..++||+|+||+||+|++. +++.||||++...... .....+.+|++++++++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 45778889999999999999974 6899999999643321 11356778888877774 999999999998755
Q ss_pred ----eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccC
Q 002321 761 ----LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGL 836 (936)
Q Consensus 761 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (936)
..++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 4789999996 699999987543 2389999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHH-------
Q 002321 837 ARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEE------- 909 (936)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~------- 909 (936)
++..... .......+|+.|+|||++. ...++.++||||+||++|||++|+.||...............-
T Consensus 167 a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 167 ARIYSYQ---MALTPVVVTLWYRAPEVLL-QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp TTTSTTC---CCSGGGGCCCSSCCHHHHH-TSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred ccccCCC---cccCCccccccccCchHHc-CCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 9865422 2234567899999999984 4468999999999999999999999998876543322111100
Q ss_pred ------------------------Hhhhccccceeeccccccccccccc
Q 002321 910 ------------------------HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 910 ------------------------~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
...++.+.+++.+||..||.+||+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 291 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISA 291 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCH
Confidence 0122455679999999999999985
No 183
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.6e-37 Score=332.45 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=194.0
Q ss_pred cccccCCCcccccCceEEEEEEeCC----CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEE-eCCeeE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD----GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYW-TQSLQL 763 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~ 763 (936)
...|+..+.||+|+||.||+|++.+ ...||||++.........+.+.+|+.++++++||||+++++++. .+...+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3456778899999999999999653 23689999876554455678999999999999999999999975 455779
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 764 LIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
+||||+++|+|.++++... ..+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999999997643 33889999999999999999999999999999999999999999999999999866433
Q ss_pred cc--ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhcc
Q 002321 844 DR--YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAE 915 (936)
Q Consensus 844 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~ 915 (936)
.. ........+++.|+|||.+ ....++.++||||+|+++|||++ |.+||............. ..+...+..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESL-QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 260 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHH
T ss_pred chhccccccCCCCCccccChHHh-cCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHH
Confidence 22 1223345567889999988 45578999999999999999999 666776655433221111 112334567
Q ss_pred ccceeecccccccccccccC
Q 002321 916 WRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+.+++.+||..||.+||+++
T Consensus 261 l~~li~~~l~~~p~~Rps~~ 280 (298)
T 3f66_A 261 LYEVMLKCWHPKAEMRPSFS 280 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHHcCCChhhCcCHH
Confidence 88999999999999999864
No 184
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=333.54 Aligned_cols=241 Identities=22% Similarity=0.342 Sum_probs=179.6
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.. +|+.||||++...... ...+.+.+|+.++++++||||+++++++.+....++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 34677889999999999999974 6899999999654321 22467899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++++|.+++.... ..+++.++..++.|+++||+|||+++|+||||||+||+++.++.+||+|||++........
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 167 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE- 167 (278)
T ss_dssp ECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred ecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC-
Confidence 9999999999997643 2389999999999999999999999999999999999999999999999999986643221
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHH----HHHHHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSV----TWLEEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 922 (936)
......+++.|+|||.+. ...++.++||||+|+++|||++|+.||........... .+..+...+.++.+++.+
T Consensus 168 -~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 245 (278)
T 3cok_A 168 -KHYTLCGTPNYISPEIAT-RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQ 245 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHH
T ss_pred -cceeccCCCCcCCcchhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHH
Confidence 123356889999999884 45678999999999999999999999987554221110 001123345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 246 ~l~~dp~~Rps~~ 258 (278)
T 3cok_A 246 LLRRNPADRLSLS 258 (278)
T ss_dssp HSCSSGGGSCCHH
T ss_pred HcccCHhhCCCHH
Confidence 9999999999863
No 185
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.1e-37 Score=327.70 Aligned_cols=237 Identities=22% Similarity=0.276 Sum_probs=195.2
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeC--CeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ--SLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+++ ++.||||+++..... ...+.+.+|+.++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 34677789999999999999986 899999999765433 3356799999999999999999999999876 6789999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSN--IIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+++ ++||||||+||+++.++.++++|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-- 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred cccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence 99999999999986542 34899999999999999999999999 99999999999999999999999998754321
Q ss_pred cccccccccCcccccCcccccCccc--CCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------HHhhhccc
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVK--ITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------EHWKKAEW 916 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~ 916 (936)
....+|+.|+|||.+.+... ++.++||||+||++|||++|+.||............... +...+..+
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHV 240 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHH
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHH
Confidence 23467889999998854322 334899999999999999999999887654332211111 12345678
Q ss_pred cceeecccccccccccccC
Q 002321 917 RNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+++.+||..||.+||+++
T Consensus 241 ~~li~~~l~~~p~~Rps~~ 259 (271)
T 3kmu_A 241 SKLMKICMNEDPAKRPKFD 259 (271)
T ss_dssp HHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHcCCChhhCcCHH
Confidence 8999999999999999874
No 186
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.5e-36 Score=331.57 Aligned_cols=245 Identities=24% Similarity=0.393 Sum_probs=187.5
Q ss_pred ccccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
....|+..+.||+|+||.||+|+.. +|+.||||+++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3455788889999999999999975 689999999975332 2345778999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 765 IYEFVSGGSLHKHLHEGS-GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
||||+++++|.+++.... ....+++..++.++.|++.||+|||+.|++||||||+||+++.++.+||+|||+++.....
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 999999999999986521 2234899999999999999999999999999999999999999999999999999765432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHH--------Hhhhcc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEE--------HWKKAE 915 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~--------~~~~~~ 915 (936)
. .......+++.|+|||.+. ...++.++||||||+++|||++|+.||................ ...++.
T Consensus 190 ~--~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (310)
T 2wqm_A 190 T--TAAHSLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 266 (310)
T ss_dssp -----------CCSSCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHH
T ss_pred C--ccccccCCCeeEeChHHhC-CCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHH
Confidence 2 1223456788999999884 4578999999999999999999999997654322221111111 223467
Q ss_pred ccceeecccccccccccccC
Q 002321 916 WRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+.+++.+||..||.+||+++
T Consensus 267 l~~li~~~l~~dp~~Rps~~ 286 (310)
T 2wqm_A 267 LRQLVNMCINPDPEKRPDVT 286 (310)
T ss_dssp HHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHHcCCChhhCCCHH
Confidence 88999999999999999874
No 187
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6e-37 Score=329.69 Aligned_cols=242 Identities=24% Similarity=0.307 Sum_probs=194.3
Q ss_pred cccccCCCcccccCceEEEEEEeCC----CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD----GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
...|+..+.||+|+||.||+|++.. +..||||++.........+.+.+|++++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 3456778899999999999998653 3469999997665445568899999999999999999999998654 5689
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+++++|.+++..... .+++..+..++.|+++||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp EEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred EEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999999999976432 38999999999999999999999999999999999999999999999999998664322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhccccc
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWRN 918 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~ 918 (936)
........+++.|+|||.+ ....++.++||||+|+++|||++ |+.||...+.......... .+...++.+.+
T Consensus 168 -~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (281)
T 3cc6_A 168 -YYKASVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT 245 (281)
T ss_dssp ------CCCCCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHH
T ss_pred -ccccccCCCCcceeCchhh-ccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence 1222344567889999988 45578999999999999999998 9999986655432221111 12234466889
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 246 li~~~l~~~p~~Rps~~ 262 (281)
T 3cc6_A 246 LMTRCWDYDPSDRPRFT 262 (281)
T ss_dssp HHHHHTCSSGGGSCCHH
T ss_pred HHHHHccCCchhCcCHH
Confidence 99999999999999863
No 188
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=362.58 Aligned_cols=241 Identities=26% Similarity=0.374 Sum_probs=198.3
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
...|+..++||+|+||+||+|++.++..||||+++.... ..+++.+|++++++++|+||+++++++.+ ...++||||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 445677889999999999999998888899999976542 35789999999999999999999999876 668999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++|+|.++++.... ..+++.+++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 343 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~ 420 (535)
T 2h8h_A 343 MSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTA 420 (535)
T ss_dssp CTTEEHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH-HHHT
T ss_pred hcCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC-ceec
Confidence 999999999975321 23889999999999999999999999999999999999999999999999999876432 1222
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhccccceeec
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWRNVSMR 922 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 922 (936)
.....++..|+|||++. ...++.++|||||||++|||++ |+.||.............. .+...++.+.+++.+
T Consensus 421 ~~~~~~~~~y~aPE~~~-~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~ 499 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 499 (535)
T ss_dssp TCSTTSCGGGSCHHHHH-HCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred ccCCcCcccccCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 23345677899999884 4468999999999999999999 9999987655332211100 012344668899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+|+
T Consensus 500 cl~~dP~~RPt~~ 512 (535)
T 2h8h_A 500 CWRKEPEERPTFE 512 (535)
T ss_dssp HTCSSGGGSCCHH
T ss_pred HcCCChhHCcCHH
Confidence 9999999999985
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-37 Score=331.12 Aligned_cols=243 Identities=22% Similarity=0.297 Sum_probs=194.0
Q ss_pred ccccCCCcccccCceEEEEEEeCC----CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee-EE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRD----GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ-LL 764 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~l 764 (936)
..|...+.||+|+||+||+|++.+ +..||+|++.........+.+.+|+.++++++||||+++++++.+.+.. ++
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 345666889999999999998643 2379999997655445567899999999999999999999999876554 89
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+.+|+|.+++.... ..+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 101 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp EECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999997633 348899999999999999999999999999999999999999999999999998654322
Q ss_pred c--ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCC-CCCccchhHHHHHHHH-----HHHhhhccc
Q 002321 845 R--YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKR-PLSTWKMMWWFSVTWL-----EEHWKKAEW 916 (936)
Q Consensus 845 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~-Pf~~~~~~~~~~~~~~-----~~~~~~~~~ 916 (936)
. ........+++.|+|||.+ ....++.++||||+||++|||++|.. ||...+.......... .+...++.+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESL-QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSL 257 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHH-TTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccccCcCCCCCccccChhhh-ccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHH
Confidence 1 1223345578889999998 45578999999999999999999554 4554444322211110 122344678
Q ss_pred cceeecccccccccccccC
Q 002321 917 RNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+++.+||..||.+||+++
T Consensus 258 ~~li~~~l~~~p~~Rps~~ 276 (298)
T 3pls_A 258 YQVMQQCWEADPAVRPTFR 276 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHccCChhhCcCHH
Confidence 8999999999999999874
No 190
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.6e-36 Score=332.30 Aligned_cols=240 Identities=20% Similarity=0.274 Sum_probs=188.8
Q ss_pred cccC-CCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEEEE
Q 002321 691 LLNK-DCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 691 ~~~~-~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 767 (936)
.|+. .+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 4555 467999999999999965 68999999996553 23467889999999995 79999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC---eEEeeccCccccCCCc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE---PKVGDYGLARLLPMLD 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~~~~~~ 844 (936)
|+++|+|.+++..... +++.++..++.|++.||+|||+++|+||||||+||+++.++. +||+|||+++......
T Consensus 92 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRH---FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp CCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred cCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 9999999999987543 899999999999999999999999999999999999998776 9999999997653221
Q ss_pred c-----ccccccccCcccccCcccccC----cccCCchhhHHHHHHHHHHHHcCCCCCCccchhH-------------HH
Q 002321 845 R-----YVLSSKIQSALGYMAPEFACR----TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMW-------------WF 902 (936)
Q Consensus 845 ~-----~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~-------------~~ 902 (936)
. ........+++.|+|||++.. ...++.++||||+||++|||++|+.||....... ..
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 248 (316)
T 2ac3_A 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248 (316)
T ss_dssp -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence 1 111223458999999998843 2457899999999999999999999997753210 00
Q ss_pred HHHHHH--------H--Hhhhccccceeeccccccccccccc
Q 002321 903 SVTWLE--------E--HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 903 ~~~~~~--------~--~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
...... . ...+..+++++.+||..||.+||+.
T Consensus 249 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 290 (316)
T 2ac3_A 249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSA 290 (316)
T ss_dssp HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCH
Confidence 001000 1 1234568899999999999999985
No 191
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.8e-36 Score=332.60 Aligned_cols=235 Identities=20% Similarity=0.252 Sum_probs=193.9
Q ss_pred cccccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CCCcceeeeEEEe--CCee
Q 002321 687 GTHALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HPNLVTLEGYYWT--QSLQ 762 (936)
Q Consensus 687 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~ 762 (936)
.....|+..+.||+|+||+||+|+.. +++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....
T Consensus 33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 34566888899999999999999865 6899999998643 3577899999999997 9999999999987 5677
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC-CeEEeeccCccccC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG-EPKVGDYGLARLLP 841 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~a~~~~ 841 (936)
++||||+++++|.+++.. +++.++..++.|++.||+|||++||+||||||+||+++.++ .+||+|||+++...
T Consensus 109 ~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 999999999999999864 88899999999999999999999999999999999999777 89999999998664
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-----H-------
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-----E------- 909 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-----~------- 909 (936)
... ......+++.|+|||.+.+...++.++||||+||++|||++|+.||............... .
T Consensus 183 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 183 PGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 322 2234568889999999866567899999999999999999999999654332111110000 0
Q ss_pred ------------------------------Hhhhccccceeeccccccccccccc
Q 002321 910 ------------------------------HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 910 ------------------------------~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
...++.+.+++.+||..||.+||+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta 314 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCH
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCH
Confidence 0035667889999999999999985
No 192
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=341.15 Aligned_cols=242 Identities=15% Similarity=0.153 Sum_probs=187.7
Q ss_pred cccccCCCcccccCceEEEEEEeC----CCcEEEEEEeeccCccc----------hHHHHHHHHHHHHcCCCCCcceeee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR----DGRPVAIKKLTVSSLVK----------SQEDFEREVKKLGKVRHPNLVTLEG 754 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~ 754 (936)
...|+..+.||+|+||.||+|+.. ++..||||++....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 346788889999999999999976 47889999986543211 1134668889999999999999999
Q ss_pred EEEe----CCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC--C
Q 002321 755 YYWT----QSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG--E 828 (936)
Q Consensus 755 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~--~ 828 (936)
++.. ....++||||+ +++|.+++.... .+++.+++.++.|++.||+|||+++|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCc
Confidence 9987 67889999999 999999998654 389999999999999999999999999999999999999887 9
Q ss_pred eEEeeccCccccCCCccc-----cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccch--hHH
Q 002321 829 PKVGDYGLARLLPMLDRY-----VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKM--MWW 901 (936)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~--~~~ 901 (936)
+||+|||+++.+...... .......+++.|+|||++. +..++.++|||||||++|||++|+.||..... ...
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK-GVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHH-TCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 999999999876432211 1124457899999999884 45789999999999999999999999965322 111
Q ss_pred HH--HHHHH--HH---------hhhccccceeecccccccccccccC
Q 002321 902 FS--VTWLE--EH---------WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 902 ~~--~~~~~--~~---------~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.. ..... +. ..++++.+++.+||..||.+||+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 317 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQ 317 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHH
Confidence 11 11100 01 3345789999999999999999874
No 193
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.7e-37 Score=328.61 Aligned_cols=238 Identities=24% Similarity=0.352 Sum_probs=199.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++.+....++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 45778889999999999999976 5789999998654321 22467899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp CCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred EeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 99999999999987543 8999999999999999999999999999999999999999999999999997654321
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----HHHHhhhccccceeec
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 922 (936)
.....+++.|+|||.+. +..++.++||||+|+++|||++|+.||...+......... ..+...+..+++++.+
T Consensus 169 --~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 245 (284)
T 2vgo_A 169 --RRTMCGTLDYLPPEMIE-GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISK 245 (284)
T ss_dssp --BCCCCSCGGGCCHHHHT-TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHH
T ss_pred --cccccCCCCcCCHHHhc-cCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHH
Confidence 23456889999999884 4568999999999999999999999998766543221111 0123345678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+.+
T Consensus 246 ~l~~~p~~Rps~~ 258 (284)
T 2vgo_A 246 LLRYHPPQRLPLK 258 (284)
T ss_dssp HSCSSGGGSCCHH
T ss_pred HhhcCHhhCCCHH
Confidence 9999999999863
No 194
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-37 Score=338.50 Aligned_cols=240 Identities=22% Similarity=0.239 Sum_probs=191.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccch----HHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKS----QEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLL 764 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (936)
..|+..+.||+|+||.||+|++. +|+.||||++........ .+.+.+|++++++++||||+++++++.+....++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 45777889999999999999976 589999999965432211 2467899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||+++ +|.+++.... ..+++.++..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 90 v~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp EEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred EEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 9999975 8888887643 238888999999999999999999999999999999999999999999999998764322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHH---------------
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEE--------------- 909 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~--------------- 909 (936)
.......+|+.|+|||++.+...++.++||||+||++|||++|..||............+...
T Consensus 167 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (346)
T 1ua2_A 167 --RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244 (346)
T ss_dssp --CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred --ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence 223345689999999998666668999999999999999999999998876543322211110
Q ss_pred -----------------Hhhhccccceeeccccccccccccc
Q 002321 910 -----------------HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 910 -----------------~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
...+..+.+++.+||..||.+||+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 286 (346)
T 1ua2_A 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA 286 (346)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH
T ss_pred ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCH
Confidence 1123567789999999999999985
No 195
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.5e-37 Score=337.94 Aligned_cols=234 Identities=21% Similarity=0.304 Sum_probs=190.0
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 767 (936)
..|+..+.||+|+||.||+|+.+ +|+.||||+++.... ...+|++++.++ +||||+++++++.+....++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 45777889999999999999976 588999999965432 245788888888 79999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC----CCeEEeeccCccccCCC
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS----GEPKVGDYGLARLLPML 843 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~~ 843 (936)
|+++|+|.+++.... .+++.++..++.|++.||+|||++||+||||||+||++..+ +.+||+|||+++.....
T Consensus 97 ~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (342)
T 2qr7_A 97 LMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173 (342)
T ss_dssp CCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCT
T ss_pred CCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCC
Confidence 999999999997654 38999999999999999999999999999999999998543 35999999999865432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH-HHHHHHHH----------Hhh
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW-FSVTWLEE----------HWK 912 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~-~~~~~~~~----------~~~ 912 (936)
. .......+|+.|+|||++. ...++.++||||+||++|||++|+.||........ ........ ...
T Consensus 174 ~--~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 250 (342)
T 2qr7_A 174 N--GLLMTPCYTANFVAPEVLE-RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250 (342)
T ss_dssp T--CCBCCSSCCSSCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTS
T ss_pred C--CceeccCCCccccCHHHhc-CCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccC
Confidence 2 1223456899999999884 44688999999999999999999999986432111 11111110 124
Q ss_pred hccccceeeccccccccccccc
Q 002321 913 KAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 913 ~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
++.+++++.+||..||.+||+.
T Consensus 251 s~~~~~li~~~L~~dP~~R~t~ 272 (342)
T 2qr7_A 251 SDTAKDLVSKMLHVDPHQRLTA 272 (342)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCH
T ss_pred CHHHHHHHHHHCCCChhHCcCH
Confidence 5678899999999999999985
No 196
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.9e-36 Score=336.93 Aligned_cols=243 Identities=23% Similarity=0.269 Sum_probs=195.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeC-------
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ------- 759 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 759 (936)
...|+..++||+|+||.||+|+.. +|+.||||++...... .....+.+|++++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 356788889999999999999985 6899999998655432 2346788999999999999999999999873
Q ss_pred -CeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCcc
Q 002321 760 -SLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLAR 838 (936)
Q Consensus 760 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (936)
+..++||||++ |++.+.+..... .+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccC-CCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 46789999996 577777765432 38999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCcc--ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH----------
Q 002321 839 LLPMLDR--YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW---------- 906 (936)
Q Consensus 839 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~---------- 906 (936)
.+..... ........+|+.|+|||++.+...++.++||||+||++|||++|+.||.............
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 7643221 2223445679999999988666678999999999999999999999998866532221111
Q ss_pred --------------------------HHHHhhhccccceeeccccccccccccc
Q 002321 907 --------------------------LEEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 907 --------------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
......++.+.+++.+||..||.+||+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 306 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS 306 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCH
Confidence 0011123457789999999999999985
No 197
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=8.3e-37 Score=344.70 Aligned_cols=229 Identities=21% Similarity=0.271 Sum_probs=180.4
Q ss_pred CcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHc-CCCCCcceeeeEEEe----CCeeEEEEEec
Q 002321 696 CELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGK-VRHPNLVTLEGYYWT----QSLQLLIYEFV 769 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~~lv~e~~ 769 (936)
+.||+|+||+||+|+.. +++.||||++.. ...+.+|+.++.+ .+||||+++++++.. ....++||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence 57999999999999976 588999999853 2457788888744 589999999999875 55679999999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC---CCCeEEeeccCccccCCCccc
Q 002321 770 SGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG---SGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
++|+|.+++..... ..+++.++..++.|++.||+|||+.||+||||||+|||++. ++.+||+|||+++.....
T Consensus 142 ~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~--- 217 (400)
T 1nxk_A 142 DGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--- 217 (400)
T ss_dssp CSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCC---
Confidence 99999999986432 34899999999999999999999999999999999999998 789999999999865422
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH-----HHHHHH-----HH--Hhhhc
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW-----FSVTWL-----EE--HWKKA 914 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~-----~~~~~~-----~~--~~~~~ 914 (936)
.......+|+.|+|||++ ....++.++||||+||++|||++|+.||........ ...... .+ ...+.
T Consensus 218 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 296 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 296 (400)
T ss_dssp ---------CTTCCGGGS-CCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCH
T ss_pred CccccCCCCCCccCHhhc-CCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCH
Confidence 122345689999999998 455789999999999999999999999977543211 111100 01 12446
Q ss_pred cccceeecccccccccccccC
Q 002321 915 EWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 915 ~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
++++++.+||..||.+||+++
T Consensus 297 ~~~~li~~~L~~dP~~Rpt~~ 317 (400)
T 1nxk_A 297 EVKMLIRNLLKTEPTQRMTIT 317 (400)
T ss_dssp HHHHHHHTTSCSSGGGSCCHH
T ss_pred HHHHHHHHHCCCChhHCcCHH
Confidence 788999999999999999863
No 198
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.9e-37 Score=351.10 Aligned_cols=236 Identities=21% Similarity=0.233 Sum_probs=186.0
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeC------C
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ------S 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 760 (936)
...|+..+.||+|+||+||+|++. +++.||||++...... ...+.+.+|+.++++++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 345778889999999999999976 5899999999754322 3356788999999999999999999999654 3
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCcccc
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLL 840 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 840 (936)
..++||||+++ ++.+.+.. .+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+..
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 56999999965 56666643 2889999999999999999999999999999999999999999999999999865
Q ss_pred CCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-------------
Q 002321 841 PMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL------------- 907 (936)
Q Consensus 841 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~------------- 907 (936)
... .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..........
T Consensus 215 ~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 215 GTS---FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp --C---CCC----CCCTTCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred CCC---cccCCCcccccccCHHHHcC-CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 432 22344678999999999854 5789999999999999999999999988764322211100
Q ss_pred -------------------H--------------HHhhhccccceeeccccccccccccc
Q 002321 908 -------------------E--------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 908 -------------------~--------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+ ....+..+.+++.+||..||.+||+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta 350 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCH
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCH
Confidence 0 00013457899999999999999985
No 199
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.5e-37 Score=341.45 Aligned_cols=239 Identities=21% Similarity=0.325 Sum_probs=197.8
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||.||+|++. +++.||+|++.........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 345778889999999999999987 6899999999766444456789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS-NIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
|+++++|.+++..... +++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 112 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 184 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 184 (360)
T ss_dssp CCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH----
T ss_pred CCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc----
Confidence 9999999999987543 89999999999999999999996 999999999999999999999999999975421
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHH----------------------
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSV---------------------- 904 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~---------------------- 904 (936)
.......+++.|+|||++. +..++.++||||+||++|||++|+.||...+.......
T Consensus 185 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 185 SMANSFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp HC----CCCCTTCCHHHHT-TCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred ccccCCCCCCCeECHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 1223456899999999984 55789999999999999999999999987654322111
Q ss_pred ------------------HHHHH--------HhhhccccceeecccccccccccccC
Q 002321 905 ------------------TWLEE--------HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 905 ------------------~~~~~--------~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..... ...+..+.+++.+||..||.+||+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 320 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHH
Confidence 00000 01234678899999999999999863
No 200
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.7e-37 Score=333.95 Aligned_cols=246 Identities=22% Similarity=0.314 Sum_probs=187.2
Q ss_pred cccccCCCcccccCceEEEEEEeC----CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCC---
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR----DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS--- 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 760 (936)
...|...+.||+|+||.||+|+.. +++.||||+++..... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 445778889999999999999865 2458999999755332 33567899999999999999999999998754
Q ss_pred --eeEEEEEecCCCChhhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeecc
Q 002321 761 --LQLLIYEFVSGGSLHKHLHEGS---GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYG 835 (936)
Q Consensus 761 --~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (936)
..++||||+++|+|.+++.... ....+++.++++++.|+++||+|||++||+||||||+||+++.++.+||+|||
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecC
Confidence 3489999999999999985432 23458999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HH
Q 002321 836 LARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EE 909 (936)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~ 909 (936)
+++...............+++.|+|||.+. ...++.++||||+|+++|||++ |..||.............. .+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 271 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLA-DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQP 271 (313)
T ss_dssp CC----------------CCGGGSCHHHHH-SSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCB
T ss_pred cceecccccccCcccccCCCccccCchhhc-CCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCC
Confidence 998765443333344456788899999984 5578999999999999999999 9999987765433322111 11
Q ss_pred HhhhccccceeecccccccccccccC
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...++.+.+++.+||..||.+||+++
T Consensus 272 ~~~~~~l~~li~~~l~~dp~~Rps~~ 297 (313)
T 3brb_A 272 EDCLDELYEIMYSCWRTDPLDRPTFS 297 (313)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred ccccHHHHHHHHHHcCCChhhCcCHH
Confidence 22346688999999999999999874
No 201
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=7.7e-37 Score=328.49 Aligned_cols=241 Identities=26% Similarity=0.355 Sum_probs=197.1
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
...|+..+.||+|+||.||+|+..+++.||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 34567888999999999999999888899999996543 235789999999999999999999999864 457899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
+++++|.+++..... ..+++.++.+++.|++.||+|||++||+||||||+||++++++.+||+|||+++...... ...
T Consensus 89 ~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 166 (279)
T 1qpc_A 89 MENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTA 166 (279)
T ss_dssp CTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EEC
T ss_pred CCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-ccc
Confidence 999999999975421 138999999999999999999999999999999999999999999999999998765322 222
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceeec
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSMR 922 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 922 (936)
.....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||............. ..+...++.+.+++.+
T Consensus 167 ~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 245 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL 245 (279)
T ss_dssp CTTCCCCTTTSCHHHH-HHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred ccCCCCccCccChhhh-ccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHH
Confidence 2344567789999988 44568999999999999999999 999998765532221110 0012334678899999
Q ss_pred ccccccccccccC
Q 002321 923 SCKGSSRQRRRFQ 935 (936)
Q Consensus 923 ~l~~~p~~Rp~f~ 935 (936)
||..||.+||+++
T Consensus 246 ~l~~~p~~Rps~~ 258 (279)
T 1qpc_A 246 CWKERPEDRPTFD 258 (279)
T ss_dssp HTCSSGGGSCCHH
T ss_pred HhccChhhCCCHH
Confidence 9999999999874
No 202
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=8.2e-37 Score=366.11 Aligned_cols=239 Identities=22% Similarity=0.253 Sum_probs=201.3
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (936)
..|+..+.||+|+||.||+|+.+ +++.||||+++.... ....+.+.+|.+++..+ +||+|+++++++.+.+..++|
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 44677889999999999999976 588999999975422 23356788899999988 799999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++|+|.+++..... +++.++..++.||+.||+|||+++|+||||||+|||++.+|.+||+|||+|+......
T Consensus 421 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~- 496 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG- 496 (674)
T ss_dssp EECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-
T ss_pred EeCcCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC-
Confidence 999999999999987543 8999999999999999999999999999999999999999999999999998543221
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccceee
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRNVSM 921 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 921 (936)
.......||+.|+|||++ ....++.++||||+||++|||++|+.||...+.......... .+...+.++.+++.
T Consensus 497 -~~~~~~~GT~~Y~APE~l-~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 574 (674)
T 3pfq_A 497 -VTTKTFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK 574 (674)
T ss_dssp -CCBCCCCSCSSSCCHHHH-TCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHH
T ss_pred -cccccccCCCcccCHhhh-cCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 223456799999999998 455789999999999999999999999988766433322111 12345577899999
Q ss_pred ccccccccccccc
Q 002321 922 RSCKGSSRQRRRF 934 (936)
Q Consensus 922 ~~l~~~p~~Rp~f 934 (936)
+||..||.+||++
T Consensus 575 ~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 575 GLMTKHPGKRLGC 587 (674)
T ss_dssp HHSCSSSTTCTTC
T ss_pred HHccCCHHHCCCC
Confidence 9999999999986
No 203
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-37 Score=341.75 Aligned_cols=241 Identities=24% Similarity=0.323 Sum_probs=193.8
Q ss_pred ccccCCCcccccCceEEEEEEe----CCCcEEEEEEeeccCc---cchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVL----RDGRPVAIKKLTVSSL---VKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSL 761 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 761 (936)
..|+..+.||+|+||.||+|+. .+++.||||+++.... ....+.+.+|+++++++ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 4578888999999999999997 3689999999865432 12345677899999999 69999999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||+++|+|.+++..... +++.++..++.|+++||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEEeecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999999986543 8999999999999999999999999999999999999999999999999998654
Q ss_pred CCccccccccccCcccccCcccccCc-ccCCchhhHHHHHHHHHHHHcCCCCCCccchh--HHHHHHH-HH-----HHhh
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRT-VKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM--WWFSVTW-LE-----EHWK 912 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~--~~~~~~~-~~-----~~~~ 912 (936)
... ........+|+.|+|||++.+. ..++.++|||||||++|||++|+.||...... ....... .. +...
T Consensus 211 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T 1vzo_A 211 ADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM 289 (355)
T ss_dssp GGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTS
T ss_pred cCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCccc
Confidence 322 2223345689999999998542 35789999999999999999999999754321 1111111 11 1223
Q ss_pred hccccceeeccccccccccccc
Q 002321 913 KAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 913 ~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+..+++++.+||..||.+||++
T Consensus 290 ~~~~~~li~~~L~~dP~~R~~~ 311 (355)
T 1vzo_A 290 SALAKDLIQRLLMKDPKKRLGC 311 (355)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTS
T ss_pred CHHHHHHHHHHhhhCHHHhcCC
Confidence 3567889999999999999943
No 204
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=8.2e-37 Score=329.91 Aligned_cols=242 Identities=25% Similarity=0.357 Sum_probs=201.1
Q ss_pred cccccCCCcccccCceEEEEEEeCC-CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD-GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||.||+|++.. +..||||++.... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4456778899999999999999874 8899999996543 346789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++++|.+++..... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.++...... ..
T Consensus 90 ~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 167 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YT 167 (288)
T ss_dssp CCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-SE
T ss_pred cCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-cc
Confidence 9999999999986443 348999999999999999999999999999999999999999999999999998764322 22
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHHH-----HHhhhccccceee
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWLE-----EHWKKAEWRNVSM 921 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 921 (936)
......+++.|+|||.+. ...++.++||||+|+++|+|++ |..||...+........... +...++.+.+++.
T Consensus 168 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 246 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246 (288)
T ss_dssp EETTEEECGGGCCHHHHH-HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred cccCCccccCcCChhhhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHH
Confidence 233445677899999884 4468999999999999999999 99999887654333221111 1223466889999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+++
T Consensus 247 ~~l~~dp~~Rps~~ 260 (288)
T 3kfa_A 247 ACWQWNPSDRPSFA 260 (288)
T ss_dssp HHTCSSGGGSCCHH
T ss_pred HHhCCChhhCcCHH
Confidence 99999999999863
No 205
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-36 Score=338.52 Aligned_cols=235 Identities=24% Similarity=0.270 Sum_probs=187.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCC------e
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS------L 761 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 761 (936)
..|+..+.||+|+||.||+|++. +|+.||||++...... ...+++.+|++++++++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 45778889999999999999975 6899999998554322 33567899999999999999999999997653 4
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||+ +++|.++++... +++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~~----l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHEK----LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 59999999 899999997632 8999999999999999999999999999999999999999999999999998654
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH---------------
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW--------------- 906 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~--------------- 906 (936)
.. .....+|+.|+|||++.+...++.++||||+||++|||++|+.||...+.........
T Consensus 180 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 180 SE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp SS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred cc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 21 2345678999999998665678999999999999999999999998766532221100
Q ss_pred -------HHH-------------Hhhhccccceeeccccccccccccc
Q 002321 907 -------LEE-------------HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 907 -------~~~-------------~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
... ...++.+.+++.+||..||.+||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~ 302 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA 302 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCH
Confidence 000 0124557788999999999999975
No 206
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-36 Score=331.03 Aligned_cols=240 Identities=19% Similarity=0.256 Sum_probs=188.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc--hHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK--SQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+.. +++.||||++....... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 45778889999999999999976 68899999996543322 2477899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++++|.+++..... +++.++..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 114 e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~ 189 (309)
T 2h34_A 114 RLINGVDLAAMLRRQGP---LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK-L 189 (309)
T ss_dssp ECCCCEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred EecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc-c
Confidence 99999999999987543 8999999999999999999999999999999999999999999999999997654322 1
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-------HHHhhhccccce
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-------EEHWKKAEWRNV 919 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 919 (936)
.......+++.|+|||.+. ...++.++||||+|+++|||++|+.||...+.......... .+...+..+.++
T Consensus 190 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 268 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFS-ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAV 268 (309)
T ss_dssp -------CCGGGCCGGGTC-C----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHH
T ss_pred ccccccCCCcCccCHHHHc-CCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHH
Confidence 2223456889999999884 45789999999999999999999999988665422211100 011234668899
Q ss_pred eeccccccccccc-cc
Q 002321 920 SMRSCKGSSRQRR-RF 934 (936)
Q Consensus 920 ~~~~l~~~p~~Rp-~f 934 (936)
+.+||..||.+|| +.
T Consensus 269 i~~~l~~dP~~Rp~s~ 284 (309)
T 2h34_A 269 IARGMAKNPEDRYVTC 284 (309)
T ss_dssp HHHHTCSSGGGSCSSH
T ss_pred HHHhccCCHHHHHHhH
Confidence 9999999999999 54
No 207
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.5e-37 Score=343.94 Aligned_cols=238 Identities=22% Similarity=0.271 Sum_probs=188.4
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC------ee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS------LQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 762 (936)
...|+..+.||+|+||+||+|+...+..||+|++...... ..+|++++++++||||+++++++.... ..
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 4457888999999999999999987778999998544322 247999999999999999999996543 26
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc-CCCCeEEeeccCccccC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID-GSGEPKVGDYGLARLLP 841 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~ 841 (936)
++||||++++.+............+++..+..++.|+++||+|||++||+||||||+||+++ .++.+||+|||+|+...
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 89999997654433332222233489999999999999999999999999999999999999 79999999999998764
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH--------------
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-------------- 907 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-------------- 907 (936)
... ......+++.|+|||++.+...++.++||||+||++|||++|+.||.+.+..........
T Consensus 194 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 194 AGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp TTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred CCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 322 223456789999999986666799999999999999999999999988765322211100
Q ss_pred -------------------HHHhhhccccceeeccccccccccccc
Q 002321 908 -------------------EEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 908 -------------------~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.+...++.+.+++.+||..||.+||+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 316 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTA 316 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCH
Confidence 001134567899999999999999984
No 208
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.3e-37 Score=333.56 Aligned_cols=237 Identities=22% Similarity=0.343 Sum_probs=193.0
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEe---------
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWT--------- 758 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 758 (936)
...|+..+.||+|+||.||+|++. +++.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 455788889999999999999987 68999999996543 356789999999999999999999864
Q ss_pred -------CCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEE
Q 002321 759 -------QSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKV 831 (936)
Q Consensus 759 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl 831 (936)
....++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++||+||||||+||+++.++.+||
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGG-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEE
Confidence 3457899999999999999976432 23899999999999999999999999999999999999999999999
Q ss_pred eeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHHHh
Q 002321 832 GDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEEHW 911 (936)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~ 911 (936)
+|||+++...... ......+++.|+|||.+. ...++.++||||+|+++|||++|..||...............+..
T Consensus 164 ~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T 2a19_B 164 GDFGLVTSLKNDG---KRTRSKGTLRYMSPEQIS-SQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI 239 (284)
T ss_dssp CCCTTCEESSCCS---CCCCCCSCCTTSCHHHHH-CSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTT
T ss_pred Ccchhheeccccc---cccccCCcccccChhhhc-cCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhccccccc
Confidence 9999998764322 223456889999999884 456899999999999999999999998543221111111011123
Q ss_pred hhccccceeecccccccccccccC
Q 002321 912 KKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 912 ~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+..+++++.+||..||.+||+++
T Consensus 240 ~~~~~~~li~~~l~~dp~~Rps~~ 263 (284)
T 2a19_B 240 FDKKEKTLLQKLLSKKPEDRPNTS 263 (284)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCHHHHHHHHHHccCChhhCcCHH
Confidence 446678899999999999999863
No 209
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.6e-37 Score=330.17 Aligned_cols=241 Identities=18% Similarity=0.229 Sum_probs=195.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc-cchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL-VKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (936)
...|+..+.||+|+||.||+|+.. +++.||||+++.... .....++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 455788889999999999999987 689999999975433 23457788999999999 999999999999999999999
Q ss_pred EEecCCCChhhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC------------------
Q 002321 766 YEFVSGGSLHKHLHEGSG-GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS------------------ 826 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~------------------ 826 (936)
|||+++++|.+++..... ...+++.++..++.|++.||+|||++||+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 999999999999976421 1348999999999999999999999999999999999999854
Q ss_pred -CCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHH
Q 002321 827 -GEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVT 905 (936)
Q Consensus 827 -~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~ 905 (936)
..+||+|||.+...... ....+++.|+|||.+.+...++.++||||+||++|||++|..|+...+........
T Consensus 170 ~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~ 243 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG 243 (289)
T ss_dssp CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTT
T ss_pred ceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcC
Confidence 47999999999866432 23358899999999866556778999999999999999999887655432111100
Q ss_pred H--HHHHhhhccccceeecccccccccccccC
Q 002321 906 W--LEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 906 ~--~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
. ..+...++.+.+++.+||..||.+||+++
T Consensus 244 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 275 (289)
T 1x8b_A 244 RLPRIPQVLSQEFTELLKVMIHPDPERRPSAM 275 (289)
T ss_dssp CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCCcccCHHHHHHHHHHhCCCcccCCCHH
Confidence 0 01123456788999999999999999864
No 210
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.4e-37 Score=347.60 Aligned_cols=239 Identities=20% Similarity=0.308 Sum_probs=185.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-------chHHHHHHHHHHHHcCCCCCcceeeeEEEeCC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-------KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (936)
...|...+.||+|+||+||+|... +++.||||++...... .....+.+|++++++++||||+++++++.. .
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence 445778889999999999999976 5899999999654321 112357899999999999999999999754 5
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC---CeEEeeccCc
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG---EPKVGDYGLA 837 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a 837 (936)
..++||||+++|+|.+++..... +++.++..++.|++.||+|||+++|+||||||+|||++.++ .+||+|||++
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSSCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred ceEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 57899999999999998876543 89999999999999999999999999999999999997554 5999999999
Q ss_pred cccCCCccccccccccCcccccCcccccC--cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH--HHH-----HHH
Q 002321 838 RLLPMLDRYVLSSKIQSALGYMAPEFACR--TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF--SVT-----WLE 908 (936)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~--~~~-----~~~ 908 (936)
+..... .......||+.|+|||++.. ...++.++||||+||++|||++|+.||......... ... +.+
T Consensus 290 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~ 366 (419)
T 3i6u_A 290 KILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366 (419)
T ss_dssp TSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCH
T ss_pred eecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCc
Confidence 876432 22334668999999998743 356788999999999999999999999765432111 110 011
Q ss_pred H--Hhhhccccceeeccccccccccccc
Q 002321 909 E--HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 909 ~--~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+ ...++.+.+++.+||..||.+||+.
T Consensus 367 ~~~~~~~~~~~~li~~~L~~dP~~Rps~ 394 (419)
T 3i6u_A 367 EVWAEVSEKALDLVKKLLVVDPKARFTT 394 (419)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hhhcccCHHHHHHHHHHccCChhHCcCH
Confidence 1 2245778899999999999999985
No 211
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3e-36 Score=325.81 Aligned_cols=236 Identities=25% Similarity=0.377 Sum_probs=193.1
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEe----CCeeEE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWT----QSLQLL 764 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 764 (936)
.|...+.||+|+||.||+|.+. ++..||+|++...... ...+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3566778999999999999976 5789999999755433 335778999999999999999999999875 345789
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCCEEEc-CCCCeEEeeccCccccC
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSN--IIHYNIKSSNVLID-GSGEPKVGDYGLARLLP 841 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~ 841 (936)
||||+++|+|.+++..... +++..+..++.|++.||+|||+.+ |+||||||+||+++ .++.+||+|||++....
T Consensus 107 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHccC---CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 9999999999999987543 899999999999999999999999 99999999999998 78999999999997543
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhc
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKA 914 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~ 914 (936)
.. ......+++.|+|||.+. . .++.++||||+||++|+|++|+.||............... +...++
T Consensus 184 ~~----~~~~~~~t~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (290)
T 1t4h_A 184 AS----FAKAVIGTPEFMAPEMYE-E-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP 257 (290)
T ss_dssp TT----SBEESCSSCCCCCGGGGG-T-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH
T ss_pred cc----ccccccCCcCcCCHHHHh-c-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCH
Confidence 22 223456889999999884 3 4899999999999999999999999875543222111111 112235
Q ss_pred cccceeecccccccccccccC
Q 002321 915 EWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 915 ~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+.+++.+||..||.+||+++
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ 278 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIK 278 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHHHHHHHccCChhhCCCHH
Confidence 688999999999999999874
No 212
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2e-36 Score=338.20 Aligned_cols=239 Identities=19% Similarity=0.234 Sum_probs=196.4
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeC-----CeeEE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ-----SLQLL 764 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~l 764 (936)
.|+..+.||+|+||.||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 4778889999999999999976 58899999997654444557889999999999999999999999764 36799
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
||||++ |+|.+++.... +++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 108 v~e~~~-~~L~~~l~~~~----~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCS-EEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccC-cCHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 999996 69999987643 8999999999999999999999999999999999999999999999999998764322
Q ss_pred cc-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH-----------------
Q 002321 845 RY-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW----------------- 906 (936)
Q Consensus 845 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~----------------- 906 (936)
.. .......+|+.|+|||++.+...++.++||||+||++|||++|+.||...+.........
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 21 122445789999999987667678999999999999999999999998765432221100
Q ss_pred -----HH-------------HHhhhccccceeeccccccccccccc
Q 002321 907 -----LE-------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 907 -----~~-------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.. ....+..+.+++.+||..||.+||+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 308 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 308 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCH
Confidence 00 01123567899999999999999985
No 213
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.2e-37 Score=330.82 Aligned_cols=240 Identities=23% Similarity=0.316 Sum_probs=191.9
Q ss_pred cccCCC-cccccCceEEEEEEeC---CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEE
Q 002321 691 LLNKDC-ELGRGGFGAVYRTVLR---DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 691 ~~~~~~-~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (936)
.|+..+ .||+|+||.||+|.+. +++.||||+++..... ...+++.+|++++++++||||+++++++ .....++|
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv 95 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV 95 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence 455555 8999999999999643 4688999999755433 2357899999999999999999999999 55677899
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++++|.+++..... +++.++..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp EECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred EEeCCCCCHHHHHHhCcC---CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 999999999999987543 89999999999999999999999999999999999999999999999999987644332
Q ss_pred c-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHHH-----HHhhhccccc
Q 002321 846 Y-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWLE-----EHWKKAEWRN 918 (936)
Q Consensus 846 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~~-----~~~~~~~~~~ 918 (936)
. .......+++.|+|||.+. ...++.++||||+|+++|||++ |+.||...+........... +...+..+.+
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 251 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD 251 (291)
T ss_dssp EEEC----CCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred cccccccCCCCceeeChHHhc-cCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 2 1223344678899999884 4468899999999999999999 99999887654332211100 1234567899
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 252 li~~~l~~dp~~Rps~~ 268 (291)
T 1xbb_A 252 LMNLCWTYDVENRPGFA 268 (291)
T ss_dssp HHHHHTCSSTTTSCCHH
T ss_pred HHHHHcCCChhhCcCHH
Confidence 99999999999999874
No 214
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.6e-37 Score=338.31 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=194.6
Q ss_pred ccccccCCCcccccCceEEEEEEeC-CCcE--EEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeE
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLR-DGRP--VAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQL 763 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (936)
....|+..+.||+|+||.||+|+.. ++.. ||||+++........+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 3456778889999999999999976 4554 4999987654444567789999999999 8999999999999999999
Q ss_pred EEEEecCCCChhhhhhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeE
Q 002321 764 LIYEFVSGGSLHKHLHEGS-------------GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPK 830 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~k 830 (936)
+||||+++|+|.+++.... ....+++.+++.++.|++.||+|||++||+||||||+||+++.++.+|
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEE
Confidence 9999999999999997643 123589999999999999999999999999999999999999999999
Q ss_pred EeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH---
Q 002321 831 VGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW--- 906 (936)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~--- 906 (936)
|+|||+++.... ........+++.|+|||.+ ....++.++||||+||++|||++ |+.||.............
T Consensus 183 L~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~ 258 (327)
T 1fvr_A 183 IADFGLSRGQEV---YVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 258 (327)
T ss_dssp ECCTTCEESSCE---ECCC----CCTTTCCHHHH-HHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC
T ss_pred EcccCcCccccc---cccccCCCCCccccChhhh-ccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCC
Confidence 999999974321 2222334567889999988 45568999999999999999998 999998876543221110
Q ss_pred --HHHHhhhccccceeecccccccccccccC
Q 002321 907 --LEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 907 --~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..+...+..+.+++.+||..||.+||+++
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 289 (327)
T 1fvr_A 259 RLEKPLNCDDEVYDLMRQCWREKPYERPSFA 289 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence 01122346788999999999999999863
No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.3e-37 Score=336.86 Aligned_cols=246 Identities=19% Similarity=0.319 Sum_probs=180.0
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..+.||+|+||.||+|+.. +++.||||++.........+++.+|++++++++||||+++++++...+..++||||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 45677789999999999999965 68999999987654444567788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 769 VSGGSLHKHLHEG-----SGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 769 ~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
+++++|.+++... .....+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 9999999998641 11234899999999999999999999999999999999999999999999999999766432
Q ss_pred cc---ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-----------H
Q 002321 844 DR---YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-----------E 909 (936)
Q Consensus 844 ~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-----------~ 909 (936)
.. ........+++.|+|||++.....++.++||||+||++|||++|+.||............... +
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDK 254 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccc
Confidence 21 112234568899999998855456899999999999999999999999886654332111100 0
Q ss_pred ---HhhhccccceeecccccccccccccC
Q 002321 910 ---HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ---~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...+..+.+++.+||..||.+||+++
T Consensus 255 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 283 (303)
T 2vwi_A 255 EMLKKYGKSFRKMISLCLQKDPEKRPTAA 283 (303)
T ss_dssp CCCCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred hhhhhhhHHHHHHHHHHccCChhhCcCHH
Confidence 11224577899999999999999863
No 216
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.6e-38 Score=354.10 Aligned_cols=239 Identities=13% Similarity=0.123 Sum_probs=183.3
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHH---HHHHcCCCCCcceee-------eEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREV---KKLGKVRHPNLVTLE-------GYY 756 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~~ 756 (936)
..|+..+.||+|+||+||+|++. +|+.||||++..... ....+.+.+|+ +++++++||||++++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 45677889999999999999964 689999999975422 23457899999 455566899999998 666
Q ss_pred EeCC-----------------eeEEEEEecCCCChhhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Q 002321 757 WTQS-----------------LQLLIYEFVSGGSLHKHLHEGSG----GNFLSWNERFNVIQGTAKSLAHLHQSNIIHYN 815 (936)
Q Consensus 757 ~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~D 815 (936)
.+.+ ..++||||+ +|+|.+++..... ...+++..++.|+.|++.||+|||++||+|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD 231 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 231 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 6543 268999999 6899999986422 11244588889999999999999999999999
Q ss_pred CCCCCEEEcCCCCeEEeeccCccccCCCccccccccccCcccccCcccccCc----------ccCCchhhHHHHHHHHHH
Q 002321 816 IKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRT----------VKITDKCDVYGFGVLVLE 885 (936)
Q Consensus 816 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------~~~~~~~DvwSlG~~l~e 885 (936)
|||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. ..++.++|||||||++||
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 999999999999999999999985432 2234456 889999998543 268999999999999999
Q ss_pred HHcCCCCCCccchhHHHHHHHHHHHhhhccccceeecccccccccccccC
Q 002321 886 VVTGKRPLSTWKMMWWFSVTWLEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 886 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
|++|+.||...................++.+.+++.+||..||.+||+++
T Consensus 306 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~ 355 (377)
T 3byv_A 306 IWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPL 355 (377)
T ss_dssp HHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHH
T ss_pred HHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHH
Confidence 99999999775432111111111123456789999999999999999863
No 217
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=327.29 Aligned_cols=241 Identities=23% Similarity=0.296 Sum_probs=194.2
Q ss_pred ccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEecC
Q 002321 692 LNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFVS 770 (936)
Q Consensus 692 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (936)
+.....||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 344558999999999999975 58899999987553 2345779999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC-CCCeEEeeccCccccCCCcccccc
Q 002321 771 GGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG-SGEPKVGDYGLARLLPMLDRYVLS 849 (936)
Q Consensus 771 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~ 849 (936)
+++|.+++........+++..+..++.|++.||+|||++||+||||||+||+++. ++.+||+|||+++...... ...
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~~ 180 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PCT 180 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--Ccc
Confidence 9999999987654445778999999999999999999999999999999999987 8999999999998664322 122
Q ss_pred ccccCcccccCcccccCc-ccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhccccceee
Q 002321 850 SKIQSALGYMAPEFACRT-VKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAEWRNVSM 921 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~-~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 921 (936)
....+++.|+|||++... ..++.++||||+|+++|||++|+.||............... +...+..+.+++.
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 260 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 260 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHH
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHH
Confidence 345688999999988443 24789999999999999999999999765443222111111 1223466788999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+++
T Consensus 261 ~~l~~dp~~Rps~~ 274 (295)
T 2clq_A 261 KCFEPDPDKRACAN 274 (295)
T ss_dssp HTTCSSTTTSCCHH
T ss_pred HHccCChhhCCCHH
Confidence 99999999999863
No 218
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=329.70 Aligned_cols=240 Identities=23% Similarity=0.377 Sum_probs=194.2
Q ss_pred ccccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
....|+..+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|+.++++++||||+++++++......++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 3455778889999999999999986 48999999997543 3467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++++|.+++.... ..+++.++..++.|++.||+|||+.|++||||||+||+++.++.+||+|||.+.......
T Consensus 104 e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp ECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred ecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 9999999999987432 238999999999999999999999999999999999999999999999999997654321
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------HHhhhccccce
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------EHWKKAEWRNV 919 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 919 (936)
.......+++.|+|||.+. ...++.++||||+|+++|||++|+.||...+........... +...+..+.++
T Consensus 180 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 258 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQ-EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDF 258 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHS-SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred cccCccCCCCCccChhhcC-CCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHH
Confidence 2233456889999999984 456899999999999999999999999876653322111100 12234667899
Q ss_pred eecccccccccccccC
Q 002321 920 SMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 920 ~~~~l~~~p~~Rp~f~ 935 (936)
+.+||..||.+||+++
T Consensus 259 i~~~l~~dp~~Rpt~~ 274 (314)
T 3com_A 259 VKQCLVKSPEQRATAT 274 (314)
T ss_dssp HHHHTCSCTTTSCCHH
T ss_pred HHHHccCChhhCcCHH
Confidence 9999999999999863
No 219
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.4e-36 Score=345.38 Aligned_cols=237 Identities=22% Similarity=0.245 Sum_probs=186.4
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeC------Ce
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ------SL 761 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (936)
...|+..+.||+|+||.||+|++. +|+.||||++.... ....+|++++++++||||+++++++... ..
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 345788889999999999999986 58999999986442 2234799999999999999999998542 13
Q ss_pred eEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC-CCeEEeeccCccc
Q 002321 762 QLLIYEFVSGGSLHKHLHEG-SGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS-GEPKVGDYGLARL 839 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a~~ 839 (936)
.++||||+++ ++.+.+... .....+++..+..++.|+++||+|||++||+||||||+|||++.+ +.+||+|||+++.
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 5789999974 666655431 122348999999999999999999999999999999999999965 5789999999986
Q ss_pred cCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-----------H
Q 002321 840 LPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-----------E 908 (936)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-----------~ 908 (936)
..... ......+|+.|+|||++.+...++.++||||+||++|||++|+.||...+.......... .
T Consensus 207 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 207 LVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp CCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 54322 223456799999999986666789999999999999999999999988654322211000 0
Q ss_pred ----------------------HHhhhccccceeeccccccccccccc
Q 002321 909 ----------------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 909 ----------------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+...+.++.+++.+||..||.+||+.
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~ 331 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 331 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCH
Confidence 01124567899999999999999974
No 220
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.7e-36 Score=352.00 Aligned_cols=237 Identities=22% Similarity=0.301 Sum_probs=195.9
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc------------chHHHHHHHHHHHHcCCCCCcceeeeEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV------------KSQEDFEREVKKLGKVRHPNLVTLEGYY 756 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~l~~~~ 756 (936)
..|...++||+|+||+||+|+.+ +++.||||++...... ...+.+.+|+.++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 45778889999999999999976 5789999999754322 2356789999999999999999999999
Q ss_pred EeCCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC---CeEEee
Q 002321 757 WTQSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG---EPKVGD 833 (936)
Q Consensus 757 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~---~~kl~D 833 (936)
.+....++||||+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999999876543 89999999999999999999999999999999999998876 699999
Q ss_pred ccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH-------
Q 002321 834 YGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW------- 906 (936)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~------- 906 (936)
||+++...... ......||+.|+|||++. . .++.++||||+||++|+|++|+.||.............
T Consensus 193 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~ 267 (504)
T 3q5i_A 193 FGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-K-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267 (504)
T ss_dssp CTTCEECCTTS---CBCCCCSCTTTCCHHHHT-T-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred CCCCEEcCCCC---ccccccCCcCCCCHHHhc-c-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99998764322 234456899999999884 3 58999999999999999999999998876543322111
Q ss_pred -HHHHhhhccccceeeccccccccccccc
Q 002321 907 -LEEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 907 -~~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
......++.+++++.+||..||.+||+.
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~ 296 (504)
T 3q5i_A 268 FNDWKNISDEAKELIKLMLTYDYNKRCTA 296 (504)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred ccccCCCCHHHHHHHHHHcCCChhHCCCH
Confidence 1112245778999999999999999985
No 221
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.1e-36 Score=336.21 Aligned_cols=239 Identities=23% Similarity=0.372 Sum_probs=197.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-------chHHHHHHHHHHHHcC-CCCCcceeeeEEEeCC
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-------KSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQS 760 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (936)
..|+..+.||+|+||.||+|++. +|+.||||++...... ...+.+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 34677789999999999999986 6999999998654321 1145678999999999 7999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCcccc
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLL 840 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 840 (936)
..++||||+++++|.+++..... +++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++..+
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999999999986543 899999999999999999999999999999999999999999999999999876
Q ss_pred CCCccccccccccCcccccCcccccC-----cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH------HHH
Q 002321 841 PMLDRYVLSSKIQSALGYMAPEFACR-----TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW------LEE 909 (936)
Q Consensus 841 ~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~------~~~ 909 (936)
.... ......||+.|+|||++.+ ...++.++||||+||++|||++|+.||............. ..+
T Consensus 251 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 327 (365)
T 2y7j_A 251 EPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP 327 (365)
T ss_dssp CTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHH
T ss_pred CCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence 4322 2244678999999998742 2357889999999999999999999998765532221110 011
Q ss_pred H--hhhccccceeeccccccccccccc
Q 002321 910 H--WKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 910 ~--~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
. ..+..+.+++.+||..||.+||++
T Consensus 328 ~~~~~~~~~~~li~~~L~~dP~~Rps~ 354 (365)
T 2y7j_A 328 EWDDRSSTVKDLISRLLQVDPEARLTA 354 (365)
T ss_dssp HHSSSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCH
Confidence 2 234568899999999999999986
No 222
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.7e-37 Score=362.99 Aligned_cols=236 Identities=22% Similarity=0.310 Sum_probs=190.3
Q ss_pred CCcccccCceEEEEEEeC---CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEecC
Q 002321 695 DCELGRGGFGAVYRTVLR---DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEFVS 770 (936)
Q Consensus 695 ~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 770 (936)
.++||+|+||+||+|.+. .++.||||+++..... ...+++.+|++++++++||||+++++++.. +..++||||++
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 357999999999999754 4678999999765433 336789999999999999999999999965 45789999999
Q ss_pred CCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc-cccc
Q 002321 771 GGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR-YVLS 849 (936)
Q Consensus 771 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-~~~~ 849 (936)
+|+|.+++..... +++.++..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+..... ....
T Consensus 453 ~g~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 453 LGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp TEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCCHHHHHhhCCC---CCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999976543 89999999999999999999999999999999999999999999999999987654322 2223
Q ss_pred ccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhccccceeecc
Q 002321 850 SKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWRNVSMRS 923 (936)
Q Consensus 850 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 923 (936)
....+++.|+|||++ ....++.++|||||||++|||++ |+.||...+.......... .+...+..+.+++.+|
T Consensus 530 ~~~~~t~~y~APE~~-~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c 608 (635)
T 4fl3_A 530 THGKWPVKWYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 608 (635)
T ss_dssp -----CGGGSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred cCCCCceeeeChhhh-cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence 334567889999998 45578999999999999999998 9999988766433322111 1233456789999999
Q ss_pred cccccccccccC
Q 002321 924 CKGSSRQRRRFQ 935 (936)
Q Consensus 924 l~~~p~~Rp~f~ 935 (936)
|..||.+||+|+
T Consensus 609 l~~dP~~RPs~~ 620 (635)
T 4fl3_A 609 WTYDVENRPGFA 620 (635)
T ss_dssp TCSSTTTSCCHH
T ss_pred cCCCHhHCcCHH
Confidence 999999999974
No 223
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.3e-36 Score=351.12 Aligned_cols=238 Identities=22% Similarity=0.314 Sum_probs=197.0
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc-cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL-VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
...|+..++||+|+||+||+|+.+ +++.||||++..... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 455788889999999999999976 689999999864332 234678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc---CCCCeEEeeccCccccCCC
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID---GSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~ 843 (936)
||+++|+|.+++..... +++.++..++.|++.||+|||++||+||||||+||+++ .++.+||+|||+++.....
T Consensus 101 e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred EcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 99999999998876543 89999999999999999999999999999999999995 4568999999999866432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------H--Hhhhcc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------E--HWKKAE 915 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~--~~~~~~ 915 (936)
. ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||............... + ...++.
T Consensus 178 ~---~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 252 (486)
T 3mwu_A 178 T---KMKDRIGTAYYIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252 (486)
T ss_dssp -------CCTTGGGGCCGGGGGS--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHH
T ss_pred C---ccCCCcCCCCCCCHHHhCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHH
Confidence 2 2234568999999999843 4899999999999999999999999887654332111100 1 123466
Q ss_pred ccceeeccccccccccccc
Q 002321 916 WRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f 934 (936)
+++++.+||..||.+||+.
T Consensus 253 ~~~li~~~L~~dp~~R~t~ 271 (486)
T 3mwu_A 253 AKDLIRKMLTFHPSLRITA 271 (486)
T ss_dssp HHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHHHcCCChhhCcCH
Confidence 7899999999999999985
No 224
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-36 Score=328.00 Aligned_cols=240 Identities=22% Similarity=0.288 Sum_probs=193.6
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
.|+..+.||+|+||.||+|+.+ +|+.||||+++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (299)
T 2r3i_A 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence 3567788999999999999986 6899999998654322 2246788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVL 848 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 848 (936)
++ ++|.+++..... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.++...... ..
T Consensus 84 ~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~ 159 (299)
T 2r3i_A 84 LH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RT 159 (299)
T ss_dssp CS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS--BC
T ss_pred cc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc--cc
Confidence 97 799999876542 238899999999999999999999999999999999999999999999999997654322 12
Q ss_pred cccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH--------------------
Q 002321 849 SSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------------------- 908 (936)
Q Consensus 849 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------------------- 908 (936)
.....+++.|+|||.+.+...++.++||||+||++|||++|+.||...+...........
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccch
Confidence 234467889999999866556899999999999999999999999887654322111110
Q ss_pred -------------HHhhhccccceeeccccccccccccc
Q 002321 909 -------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 909 -------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
....++.+.+++.+||..||.+||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 278 (299)
T 2r3i_A 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278 (299)
T ss_dssp TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred hhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCH
Confidence 00123556789999999999999985
No 225
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.7e-36 Score=352.32 Aligned_cols=238 Identities=20% Similarity=0.308 Sum_probs=199.5
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (936)
...|+..+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 345788889999999999999986 689999999965433 23467899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE---cCCCCeEEeeccCccccCC
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI---DGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~ 842 (936)
|||+++|+|.+++..... +++.++..++.|++.||+|||++||+||||||+||++ +.++.+||+|||+++....
T Consensus 105 ~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp ECCCCSCBHHHHHHTCSC---CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999999999876543 8999999999999999999999999999999999999 5678999999999987643
Q ss_pred CccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH------HH--Hhhhc
Q 002321 843 LDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL------EE--HWKKA 914 (936)
Q Consensus 843 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~------~~--~~~~~ 914 (936)
.. ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.............. .+ ...++
T Consensus 182 ~~---~~~~~~gt~~y~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~ 256 (484)
T 3nyv_A 182 SK---KMKDKIGTAYYIAPEVLHG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE 256 (484)
T ss_dssp CC---SHHHHTTGGGTCCHHHHHT--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCH
T ss_pred cc---ccccCCCCccccCceeecC--CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCH
Confidence 22 2234568999999998843 589999999999999999999999988766433221110 01 12346
Q ss_pred cccceeeccccccccccccc
Q 002321 915 EWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 915 ~~~~~~~~~l~~~p~~Rp~f 934 (936)
.+++++.+||..||.+||+.
T Consensus 257 ~~~~li~~~L~~dp~~R~s~ 276 (484)
T 3nyv_A 257 SAKDLIRKMLTYVPSMRISA 276 (484)
T ss_dssp HHHHHHHHHTCSSGGGSCCH
T ss_pred HHHHHHHHHCCCChhHCcCH
Confidence 67899999999999999985
No 226
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.8e-36 Score=331.73 Aligned_cols=240 Identities=22% Similarity=0.298 Sum_probs=193.6
Q ss_pred cccCC-CcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCC-CCCcceeeeEEEeCCeeEEEE
Q 002321 691 LLNKD-CELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVR-HPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 691 ~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 766 (936)
.|... +.||+|+||.||+|+.. +++.||||+++..... .....+.+|+.++++++ ||||+++++++.+....++||
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~ 108 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL 108 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence 34444 78999999999999977 5899999999754332 33678999999999995 699999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC---CCCeEEeeccCccccCCC
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG---SGEPKVGDYGLARLLPML 843 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~ 843 (936)
||+++|+|.+++.... ...+++.++..++.|++.||+|||++||+||||||+||+++. ++.+||+|||+++.....
T Consensus 109 e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 109 EYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp ECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred EecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 9999999999986543 234899999999999999999999999999999999999998 789999999999876432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-H-----H--Hhhhcc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-E-----E--HWKKAE 915 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-~-----~--~~~~~~ 915 (936)
. ......+++.|+|||++ ....++.++||||+||++|||++|+.||...+.......... . + ...+..
T Consensus 188 ~---~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 263 (327)
T 3lm5_A 188 C---ELREIMGTPEYLAPEIL-NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL 263 (327)
T ss_dssp ---------CCCGGGCCHHHH-TTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred c---ccccccCCcCccCCeee-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHH
Confidence 2 22345689999999988 455789999999999999999999999988765433221110 0 0 123356
Q ss_pred ccceeecccccccccccccC
Q 002321 916 WRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+.+++.+||..||.+||+++
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ 283 (327)
T 3lm5_A 264 ATDFIQSLLVKNPEKRPTAE 283 (327)
T ss_dssp HHHHHHHHSCSSGGGSCCHH
T ss_pred HHHHHHHHcCCChhhCcCHH
Confidence 78899999999999999863
No 227
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.1e-35 Score=331.12 Aligned_cols=283 Identities=15% Similarity=0.118 Sum_probs=205.0
Q ss_pred CCCCCCCCCCCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEcc
Q 002321 53 LSSWSEDDDTPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLS 132 (936)
Q Consensus 53 l~sW~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls 132 (936)
+++|....+|||.|.+..|.....++ +-.. ........-..+++++.|++++|.++...+..|.++++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i---~~~~--~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI---DMQT--QDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEESCEE---CSSC--CCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceeeeee---eccc--ccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 67899887855556555554211111 1111 111222233467899999999999996555568999999999999
Q ss_pred CcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCC
Q 002321 133 GNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGE 212 (936)
Q Consensus 133 ~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 212 (936)
+|+++ .++...|..+++|++|+|++|++++..|..|+.+++|++|+|++|+++.+.+..|.++++|++|+|++|.+++.
T Consensus 78 ~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~ 156 (390)
T 3o6n_A 78 DLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI 156 (390)
T ss_dssp TSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred CCccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCcc
Confidence 99998 67888899999999999999999998899999999999999999999987666789999999999999999988
Q ss_pred CccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccC
Q 002321 213 IPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGEL 292 (936)
Q Consensus 213 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 292 (936)
.+..+.++++|++|++++|++++. .+..+++|++|++++|.+++ +.....|+.|++++|.++.. |.. ..
T Consensus 157 ~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~ 225 (390)
T 3o6n_A 157 EDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VN 225 (390)
T ss_dssp CTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CC
T ss_pred ChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--cc
Confidence 888899999999999999999865 36778999999999998873 23334666777777766643 221 23
Q ss_pred CccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCc
Q 002321 293 ESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMN 354 (936)
Q Consensus 293 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 354 (936)
++|+.|++++|++++. ..+..+++|++|+|++|.+++..|..|..+++|+.|++++|++.
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 285 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 285 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc
Confidence 5666666666666643 34556666666666666666555666666666666666666554
No 228
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.8e-36 Score=328.40 Aligned_cols=237 Identities=23% Similarity=0.316 Sum_probs=194.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|...+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 45677889999999999999976 689999999975432 2346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE---cCCCCeEEeeccCccccCCCcc
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI---DGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
+++++|.+++..... +++.++..++.|++.||+|||+.||+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-- 162 (304)
T 2jam_A 88 VSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-- 162 (304)
T ss_dssp CCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--
T ss_pred CCCccHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--
Confidence 999999999876543 8999999999999999999999999999999999999 78899999999999754321
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------H--Hhhhcccc
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------E--HWKKAEWR 917 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~--~~~~~~~~ 917 (936)
......+++.|+|||.+ ....++.++||||+||++|||++|+.||............... + ...+..+.
T Consensus 163 --~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (304)
T 2jam_A 163 --IMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAK 239 (304)
T ss_dssp --TTHHHHSCCCBCCTTTB-SSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHH
T ss_pred --ccccccCCCCccChHHh-ccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHH
Confidence 12334588999999988 4557899999999999999999999999876653322111000 0 12346788
Q ss_pred ceeecccccccccccccC
Q 002321 918 NVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 918 ~~~~~~l~~~p~~Rp~f~ 935 (936)
+++.+||..||.+||+++
T Consensus 240 ~li~~~l~~dp~~Rps~~ 257 (304)
T 2jam_A 240 DFICHLLEKDPNERYTCE 257 (304)
T ss_dssp HHHHHHHCSSTTTSCCHH
T ss_pred HHHHHHcCCChhHCcCHH
Confidence 999999999999999863
No 229
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.5e-36 Score=328.34 Aligned_cols=242 Identities=24% Similarity=0.333 Sum_probs=182.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchH-HHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQ-EDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
..|+..+.||+|+||+||+|+.. +|+.||||+++........ +.+.++...++.++||||+++++++.+.+..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 45678889999999999999975 6899999999765433333 334455556888899999999999999999999999
Q ss_pred ecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 768 FVSGGSLHKHLHEG-SGGNFLSWNERFNVIQGTAKSLAHLHQS-NIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 768 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|++ |+|.+++... .....+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 163 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD-- 163 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc--
Confidence 996 6888777542 1223499999999999999999999998 9999999999999999999999999999765432
Q ss_pred ccccccccCcccccCcccc---cCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHH-------Hhhhcc
Q 002321 846 YVLSSKIQSALGYMAPEFA---CRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEE-------HWKKAE 915 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~---~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~-------~~~~~~ 915 (936)
.......+++.|+|||.+ .....++.++||||+||++|||++|+.||................ ...+..
T Consensus 164 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (290)
T 3fme_A 164 -VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAE 242 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHH
T ss_pred -ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHH
Confidence 222334688999999986 345568999999999999999999999998754432222222221 123456
Q ss_pred ccceeecccccccccccccC
Q 002321 916 WRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f~ 935 (936)
+.+++.+||..||.+||+++
T Consensus 243 ~~~li~~~l~~~p~~Rpt~~ 262 (290)
T 3fme_A 243 FVDFTSQCLKKNSKERPTYP 262 (290)
T ss_dssp HHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHHhhcChhhCcCHH
Confidence 88899999999999999863
No 230
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.7e-36 Score=343.48 Aligned_cols=200 Identities=22% Similarity=0.279 Sum_probs=166.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc-cchHHHHHHHHHHHHcCCCCCcceeeeEEEeC-----Cee
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL-VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ-----SLQ 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 762 (936)
..|+..+.||+|+||.||+|++. +++.||||+++.... ....+++.+|++++++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 45778889999999999999976 588999999965422 23457889999999999999999999999766 568
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
++||||++ |+|.++++... .+++..+..++.|+++||+|||+.||+||||||+|||++.++.+||+|||+|+....
T Consensus 106 ~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999995 69999997653 389999999999999999999999999999999999999999999999999987643
Q ss_pred Cccc--------------------cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCC
Q 002321 843 LDRY--------------------VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPL 893 (936)
Q Consensus 843 ~~~~--------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf 893 (936)
.... .......+|+.|+|||++.....++.++||||+||++|||++|..||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 2211 12245678999999998766777999999999999999999854444
No 231
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.8e-36 Score=350.94 Aligned_cols=237 Identities=21% Similarity=0.304 Sum_probs=193.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
..|+..++||+|+||+||+|+.+ +++.||||+++..... .....+.+|+.++++++||||+++++++.+....++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45788889999999999999986 6889999999755432 335778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC---CCeEEeeccCccccCCCc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS---GEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~ 844 (936)
|+++|+|.+++..... +++..+..++.|++.||+|||++||+||||||+||+++.. +.+||+|||+++......
T Consensus 117 ~~~~g~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~ 193 (494)
T 3lij_A 117 CYKGGELFDEIIHRMK---FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193 (494)
T ss_dssp CCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred cCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence 9999999998876543 8999999999999999999999999999999999999764 459999999998764322
Q ss_pred cccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH------HHH--hhhccc
Q 002321 845 RYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL------EEH--WKKAEW 916 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~------~~~--~~~~~~ 916 (936)
......||+.|+|||++. ..++.++||||+||++|+|++|+.||.............. .+. ..++.+
T Consensus 194 ---~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 268 (494)
T 3lij_A 194 ---KMKERLGTAYYIAPEVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA 268 (494)
T ss_dssp ---CBCCCCSCTTTCCHHHHT--TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHH
T ss_pred ---cccccCCCcCeeCHHHHc--ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHH
Confidence 234456899999999883 3589999999999999999999999988766433321111 011 134567
Q ss_pred cceeeccccccccccccc
Q 002321 917 RNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f 934 (936)
++++.+||..||.+||+.
T Consensus 269 ~~li~~~L~~dp~~R~s~ 286 (494)
T 3lij_A 269 KDLIKQMLQFDSQRRISA 286 (494)
T ss_dssp HHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHHCCCChhhCccH
Confidence 889999999999999985
No 232
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-36 Score=326.77 Aligned_cols=243 Identities=21% Similarity=0.357 Sum_probs=195.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEe--CCeeEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWT--QSLQLLI 765 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 765 (936)
..|+..+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 34677789999999999999986 6899999999765433 345678999999999999999999998864 5678999
Q ss_pred EEecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCCCCEEEcCCCCeEEeeccCccc
Q 002321 766 YEFVSGGSLHKHLHEGS-GGNFLSWNERFNVIQGTAKSLAHLHQSN-----IIHYNIKSSNVLIDGSGEPKVGDYGLARL 839 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~-----ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (936)
|||+++++|.+++.... ....+++..+++++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 99999999999997543 2234899999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-----HHhhhc
Q 002321 840 LPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-----EHWKKA 914 (936)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-----~~~~~~ 914 (936)
...... ......+++.|+|||.+. ...++.++||||+|+++|||++|+.||...+........... +...+.
T Consensus 166 ~~~~~~--~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (279)
T 2w5a_A 166 LNHDTS--FAKTFVGTPYYMSPEQMN-RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD 242 (279)
T ss_dssp C---CH--HHHHHHSCCTTCCHHHHH-CC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCH
T ss_pred eccccc--cccccCCCccccChHHhc-cCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCH
Confidence 643221 122346788999999884 446899999999999999999999999887653322111000 112346
Q ss_pred cccceeecccccccccccccC
Q 002321 915 EWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 915 ~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+.+++.+||..||.+||+++
T Consensus 243 ~l~~li~~~l~~~p~~Rps~~ 263 (279)
T 2w5a_A 243 ELNEIITRMLNLKDYHRPSVE 263 (279)
T ss_dssp HHHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHHHcCCCcccCCCHH
Confidence 788999999999999999864
No 233
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=327.50 Aligned_cols=244 Identities=18% Similarity=0.224 Sum_probs=194.5
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc---cchHHHHHHHHHHHHcCCCCCcceeeeEEE--eCCeeE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL---VKSQEDFEREVKKLGKVRHPNLVTLEGYYW--TQSLQL 763 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 763 (936)
..|+..+.||+|+||.||+|... +++.||||+++.... ....+.+.+|++++++++||||+++++++. +....+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 35788899999999999999975 588999999965432 234578999999999999999999999985 445779
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 764 LIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
+||||++++ +.+++..... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.+......
T Consensus 85 lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTT-CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEehhccCC-HHHHHHhCcc-cccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 999999866 7777765432 34899999999999999999999999999999999999999999999999999876433
Q ss_pred ccccccccccCcccccCcccccCc-ccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH----HHHhhhccccc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRT-VKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL----EEHWKKAEWRN 918 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~ 918 (936)
..........+++.|+|||++.+. ..++.++||||+|+++|||++|+.||.............. .+...+..+.+
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~ 242 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSD 242 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHHH
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCHHHHH
Confidence 333333455689999999988542 2347899999999999999999999988665332211100 01123456889
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 243 li~~~l~~dp~~Rps~~ 259 (305)
T 2wtk_C 243 LLKGMLEYEPAKRFSIR 259 (305)
T ss_dssp HHHHHTCSSTTTSCCHH
T ss_pred HHHHHccCChhhCCCHH
Confidence 99999999999999863
No 234
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.2e-36 Score=329.02 Aligned_cols=242 Identities=23% Similarity=0.323 Sum_probs=193.8
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 445778889999999999999987 58899999986543 2346788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++++|.+++..... .+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++..... ...
T Consensus 97 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK--TLQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH--HHH
T ss_pred eCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc--ccc
Confidence 9999999998876432 389999999999999999999999999999999999999999999999998754321 111
Q ss_pred ccccccCcccccCccccc----CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-------HHHhhhccc
Q 002321 848 LSSKIQSALGYMAPEFAC----RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-------EEHWKKAEW 916 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~----~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-------~~~~~~~~~ 916 (936)
......+++.|+|||.+. ....++.++||||+|+++|||++|+.||...+.......... .+...+..+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHH
Confidence 223456889999999873 345688999999999999999999999988765432211110 012234567
Q ss_pred cceeecccccccccccccC
Q 002321 917 RNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+++.+||..||.+||+++
T Consensus 253 ~~li~~~l~~dp~~Rps~~ 271 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPSAA 271 (302)
T ss_dssp HHHHHHHSCSCTTTSCCHH
T ss_pred HHHHHHHcccChhhCCCHH
Confidence 8999999999999999863
No 235
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.8e-36 Score=324.45 Aligned_cols=239 Identities=23% Similarity=0.331 Sum_probs=197.4
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc--------cchHHHHHHHHHHHHcCC-CCCcceeeeEEEeC
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL--------VKSQEDFEREVKKLGKVR-HPNLVTLEGYYWTQ 759 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 759 (936)
..|+..+.||+|+||.||+|+.+ +|+.||||+++.... ....+.+.+|+++++++. ||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (298)
T 1phk_A 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 96 (298)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence 45677889999999999999986 589999999965431 122456889999999995 99999999999999
Q ss_pred CeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccc
Q 002321 760 SLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARL 839 (936)
Q Consensus 760 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (936)
...++||||+++++|.+++..... +++.++..++.|++.||+|||++|++||||||+||+++.++.+||+|||++..
T Consensus 97 ~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 97 TFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CeEEEEEeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 999999999999999999987543 89999999999999999999999999999999999999999999999999986
Q ss_pred cCCCccccccccccCcccccCccccc-----CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------
Q 002321 840 LPMLDRYVLSSKIQSALGYMAPEFAC-----RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------ 908 (936)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------ 908 (936)
..... ......+++.|+|||++. ....++.++||||+|+++|||++|+.||...............
T Consensus 174 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
T 1phk_A 174 LDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250 (298)
T ss_dssp CCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred cCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc
Confidence 64322 223456889999999874 2345788999999999999999999999876654322111100
Q ss_pred H--Hhhhccccceeeccccccccccccc
Q 002321 909 E--HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 909 ~--~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+ .-.+..+.+++.+||..||.+||++
T Consensus 251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~ 278 (298)
T 1phk_A 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTA 278 (298)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred ccccccCHHHHHHHHHHccCCcccCCCH
Confidence 1 1234568899999999999999986
No 236
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.5e-36 Score=335.50 Aligned_cols=235 Identities=20% Similarity=0.256 Sum_probs=176.5
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc-cchHHHHHHHHHHHHcCCCCCcceeeeEEEeC------Ce
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL-VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ------SL 761 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (936)
..|+..+.||+|+||.||+|.+. +|+.||||++..... ....+.+.+|++++++++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 45778889999999999999965 689999999965422 23456788999999999999999999999754 45
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||+ +++|.+++... .+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 69999999 78999988753 38999999999999999999999999999999999999999999999999998653
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH---------------
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW--------------- 906 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~--------------- 906 (936)
.. .....+|+.|+|||++.+...++.++||||+||++|||++|+.||.+.+.........
T Consensus 184 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 184 DE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred cc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 21 2345688999999998665678999999999999999999999998876532221100
Q ss_pred -------HH-----------H--Hhhhccccceeeccccccccccccc
Q 002321 907 -------LE-----------E--HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 907 -------~~-----------~--~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.. . .-.++.+.+++.+||..||.+||+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~ 306 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCH
Confidence 00 0 0123557889999999999999985
No 237
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.4e-36 Score=338.73 Aligned_cols=236 Identities=22% Similarity=0.243 Sum_probs=187.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeC---------
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ--------- 759 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 759 (936)
..|+..+.||+|+||.||+|+.. +|+.||||++..... ...+|++++++++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 35677889999999999999975 689999999865432 234799999999999999999998543
Q ss_pred -----------------------------CeeEEEEEecCCCChhhhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 002321 760 -----------------------------SLQLLIYEFVSGGSLHKHLHEG-SGGNFLSWNERFNVIQGTAKSLAHLHQS 809 (936)
Q Consensus 760 -----------------------------~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~al~~LH~~ 809 (936)
...++||||++ |+|.+.+... .....+++..+..++.|+++||+|||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 33789999997 6887776531 1123489999999999999999999999
Q ss_pred CcccCCCCCCCEEEc-CCCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc
Q 002321 810 NIIHYNIKSSNVLID-GSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT 888 (936)
Q Consensus 810 ~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~ 888 (936)
||+||||||+||+++ .++.+||+|||+|+...... ......+++.|+|||.+.+...++.++||||+||++|||++
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 999999999999998 68899999999998664322 22345678899999988666678999999999999999999
Q ss_pred CCCCCCccchhHHHHHHHH---------------------------------HHHhhhccccceeeccccccccccccc
Q 002321 889 GKRPLSTWKMMWWFSVTWL---------------------------------EEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 889 g~~Pf~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
|+.||...+.......... .+...+..+.+++.+||..||.+||+.
T Consensus 238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 316 (383)
T 3eb0_A 238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINP 316 (383)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence 9999988765322211100 011134557899999999999999985
No 238
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.3e-36 Score=331.89 Aligned_cols=240 Identities=20% Similarity=0.304 Sum_probs=190.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-------chHHHHHHHHHHHHcCCCCCcceeeeEEEeCC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-------KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (936)
...|+..+.||+|+||.||+|+.. +++.||||++...... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 345788889999999999999976 5889999998654321 12345889999999999999999999987655
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC---eEEeeccCc
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE---PKVGDYGLA 837 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a 837 (936)
.++||||+++++|.+++.... .+++.++..++.|++.||+|||++||+||||||+||+++.++. +||+|||++
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred -eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 799999999999999987643 3899999999999999999999999999999999999987664 999999999
Q ss_pred cccCCCccccccccccCcccccCccccc--CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH--HHHH-----HH
Q 002321 838 RLLPMLDRYVLSSKIQSALGYMAPEFAC--RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF--SVTW-----LE 908 (936)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~--~~~~-----~~ 908 (936)
+...... ......+++.|+|||++. ....++.++||||+||++|||++|+.||......... .... .+
T Consensus 165 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 241 (322)
T 2ycf_A 165 KILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241 (322)
T ss_dssp EECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCH
T ss_pred eeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCc
Confidence 8764321 123456889999999863 3456889999999999999999999999765432111 1110 01
Q ss_pred --HHhhhccccceeecccccccccccccC
Q 002321 909 --EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 --~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
....++.+.+++.+||..||.+||+++
T Consensus 242 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~ 270 (322)
T 2ycf_A 242 EVWAEVSEKALDLVKKLLVVDPKARFTTE 270 (322)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hhhhhcCHHHHHHHHHHcccCHhhCCCHH
Confidence 122456788999999999999999863
No 239
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.4e-36 Score=334.41 Aligned_cols=243 Identities=25% Similarity=0.356 Sum_probs=196.9
Q ss_pred cccccCCCcccccCceEEEEEEe-----CCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEE--eCCe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVL-----RDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYW--TQSL 761 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 761 (936)
...|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++. +...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 34577888999999999999984 358899999996543 234567999999999999999999999987 4456
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||+++++|.+++..... .+++.+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 7899999999999999976432 38999999999999999999999999999999999999999999999999998765
Q ss_pred CCcc-ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHH-------------HHHH
Q 002321 842 MLDR-YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFS-------------VTWL 907 (936)
Q Consensus 842 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~-------------~~~~ 907 (936)
.... ........+++.|+|||.+ .+..++.++||||+||++|||++|+.||.......... ....
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESL-SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHh-ccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 3332 2233445678889999988 44568999999999999999999999997654421110 0000
Q ss_pred H-------HHhhhccccceeecccccccccccccC
Q 002321 908 E-------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 908 ~-------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
. +...++.+.+++.+||..||.+||+++
T Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 292 (327)
T 3lxl_A 258 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFS 292 (327)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHH
Confidence 0 112346688999999999999999864
No 240
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.1e-36 Score=336.36 Aligned_cols=240 Identities=20% Similarity=0.272 Sum_probs=197.1
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccc----------------hHHHHHHHHHHHHcCCCCCcceee
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVK----------------SQEDFEREVKKLGKVRHPNLVTLE 753 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~E~~~l~~l~h~niv~l~ 753 (936)
..|+..+.||+|+||.||+|+. +++.||||++....... ..+.+.+|++++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4577888999999999999999 89999999996543221 127899999999999999999999
Q ss_pred eEEEeCCeeEEEEEecCCCChhhh------hhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCCEEEcCC
Q 002321 754 GYYWTQSLQLLIYEFVSGGSLHKH------LHEGSGGNFLSWNERFNVIQGTAKSLAHLHQ-SNIIHYNIKSSNVLIDGS 826 (936)
Q Consensus 754 ~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~-~~ivH~Dlkp~NIll~~~ 826 (936)
+++.+.+..++||||+++|+|.++ +.... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence 999999999999999999999998 55422 2459999999999999999999999 999999999999999999
Q ss_pred CCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCc-hhhHHHHHHHHHHHHcCCCCCCccchhHHHHHH
Q 002321 827 GEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITD-KCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVT 905 (936)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~ 905 (936)
+.+||+|||.+...... ......+++.|+|||.+.+...++. ++||||+||++|||++|+.||............
T Consensus 189 ~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 264 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264 (348)
T ss_dssp SCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH
T ss_pred CcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence 99999999999865432 2344568899999999865535555 999999999999999999999876542111111
Q ss_pred HHH------------------------HHhhhccccceeecccccccccccccC
Q 002321 906 WLE------------------------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 906 ~~~------------------------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
... ....+..+.+++.+||..||.+||+++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ 318 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHH
Confidence 000 023456778999999999999999863
No 241
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=336.74 Aligned_cols=238 Identities=14% Similarity=0.151 Sum_probs=191.4
Q ss_pred cccccCCCcccccCceEEEEEEeCC---------CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcce--------
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRD---------GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVT-------- 751 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------- 751 (936)
...|+..+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 3457888899999999999999763 789999998643 45789999999999999887
Q ss_pred -------eeeEEEe-CCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE
Q 002321 752 -------LEGYYWT-QSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI 823 (936)
Q Consensus 752 -------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll 823 (936)
+++++.. ....++||||+ +++|.+++.... ...+++.+++.++.|++.||+|||++||+||||||+||++
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV 192 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEE
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE
Confidence 6777776 67889999999 999999998652 1239999999999999999999999999999999999999
Q ss_pred cCCC--CeEEeeccCccccCCCccc-----cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCcc
Q 002321 824 DGSG--EPKVGDYGLARLLPMLDRY-----VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTW 896 (936)
Q Consensus 824 ~~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~ 896 (936)
+.++ .+||+|||+++.+...... .......+++.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHK-GCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 9998 9999999999876432211 1123447899999999884 457899999999999999999999999876
Q ss_pred chh--HHHHHH-HHHHH------------hhhccccceeecccccccccccccC
Q 002321 897 KMM--WWFSVT-WLEEH------------WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 897 ~~~--~~~~~~-~~~~~------------~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
... ...... ..... ..++.+.+++.+||..||.+||+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 325 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYA 325 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred CcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHH
Confidence 421 111111 11111 1257788999999999999999874
No 242
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.7e-36 Score=333.49 Aligned_cols=240 Identities=23% Similarity=0.266 Sum_probs=193.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeC-----CeeE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ-----SLQL 763 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 763 (936)
..|+..+.||+|+||.||+|+.. +|+.||||++...........+.+|++++++++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 34677789999999999999976 58999999996554444467788999999999999999999998654 5679
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 764 LIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
+||||++ |+|.+++.... +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 91 lv~e~~~-~~L~~~~~~~~----~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVISTQM----LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999996 69999987632 899999999999999999999999999999999999999999999999999876432
Q ss_pred cccc--------ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHH----------
Q 002321 844 DRYV--------LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVT---------- 905 (936)
Q Consensus 844 ~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~---------- 905 (936)
.... ......+++.|+|||++.....++.++||||+||++|||++|+.||...+........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 2111 1123467899999998766667899999999999999999999999887643221110
Q ss_pred -------------HHH-------------HHhhhccccceeeccccccccccccc
Q 002321 906 -------------WLE-------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 906 -------------~~~-------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+.. ....+..+.+++.+||..||.+||+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 300 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCH
Confidence 000 01234567789999999999999985
No 243
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.8e-36 Score=329.31 Aligned_cols=237 Identities=21% Similarity=0.267 Sum_probs=184.6
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcC--CCCCcceeeeEEEeC----Cee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV--RHPNLVTLEGYYWTQ----SLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~~ 762 (936)
...|+..+.||+|+||.||+|+.. ++.||||++... ......+|.+++... +||||+++++++... ...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 346788889999999999999986 899999998543 234455566666555 899999999999887 678
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcccCCCCCCCEEEcCCCCeEEeec
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS--------NIIHYNIKSSNVLIDGSGEPKVGDY 834 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~--------~ivH~Dlkp~NIll~~~~~~kl~Df 834 (936)
++||||+++|+|.++++... +++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 111 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df 186 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL 186 (337)
T ss_dssp EEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEEeccCCCcHHHHhhccC----CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence 99999999999999997643 89999999999999999999998 9999999999999999999999999
Q ss_pred cCccccCCCccc--cccccccCcccccCcccccCcccCCc------hhhHHHHHHHHHHHHcC----------CCCCCcc
Q 002321 835 GLARLLPMLDRY--VLSSKIQSALGYMAPEFACRTVKITD------KCDVYGFGVLVLEVVTG----------KRPLSTW 896 (936)
Q Consensus 835 g~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~------~~DvwSlG~~l~el~~g----------~~Pf~~~ 896 (936)
|+++........ .......||+.|+|||++.+. .++. ++||||+||++|||++| +.||...
T Consensus 187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDES-LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp TTCEECC---------CCSSCSCGGGCCHHHHTTC-CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCceeeccccccccCCCCCCccCcceeChhhcccc-cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 999766432221 112345789999999988544 3333 49999999999999999 7777654
Q ss_pred chhHHHHHHHHH----------------HHhhhccccceeecccccccccccccC
Q 002321 897 KMMWWFSVTWLE----------------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 897 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
............ +.-..+.+.+++.+||..||.+||+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 320 (337)
T 3mdy_A 266 VPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTAL 320 (337)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred cCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHH
Confidence 321111000000 012234578899999999999999864
No 244
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.6e-36 Score=324.20 Aligned_cols=239 Identities=16% Similarity=0.177 Sum_probs=189.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEE-EeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYY-WTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 767 (936)
..|+..+.||+|+||.||+|+.. +++.||||++..... .+.+.+|++++++++|++++..+.++ ......++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 45778889999999999999974 689999998755432 24578899999999988877766665 56778899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE---cCCCCeEEeeccCccccCCCc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI---DGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
|+ +++|.+++..... .+++.++..++.|++.||+|||+++|+||||||+||++ +.++.+||+|||+++......
T Consensus 86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred cc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 99 9999999975432 38999999999999999999999999999999999999 789999999999998764432
Q ss_pred cc-----cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh----HHHHH---HHHH--H-
Q 002321 845 RY-----VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM----WWFSV---TWLE--E- 909 (936)
Q Consensus 845 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~----~~~~~---~~~~--~- 909 (936)
.. .......+++.|+|||.+. +..++.++||||+||++|||++|+.||...+.. ..... .... +
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 241 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred cCccCCCCcccccCCCccccchHHhc-CCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhh
Confidence 21 1233567899999999984 456899999999999999999999999874321 11111 1111 1
Q ss_pred --HhhhccccceeecccccccccccccC
Q 002321 910 --HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 --~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...++.+.+++.+||..||.+||+++
T Consensus 242 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 269 (296)
T 4hgt_A 242 LCKGYPSEFATYLNFCRSLRFDDKPDYS 269 (296)
T ss_dssp HTTTSCHHHHHHHHHHHTSCTTCCCCHH
T ss_pred hhccCCHHHHHHHHHHHhcCCCCCCCHH
Confidence 12257889999999999999999874
No 245
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.7e-36 Score=334.18 Aligned_cols=235 Identities=20% Similarity=0.246 Sum_probs=183.3
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCC------e
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS------L 761 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 761 (936)
..|+..+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 45778889999999999999976 5889999999754322 33567889999999999999999999997654 6
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||++ |+|.+++.. .+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCC-CCHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 799999996 578888753 28899999999999999999999999999999999999999999999999998653
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHH---------------
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTW--------------- 906 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~--------------- 906 (936)
.. .......+|+.|+|||++. +..++.++||||+||++|||++|+.||...+.........
T Consensus 179 ~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 179 TS---FMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp --------------CTTCCHHHHT-TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cc---cccCCceecCCccCHHHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 21 1223456889999999985 4578999999999999999999999998765432211100
Q ss_pred ------HH-------------------------HHhhhccccceeeccccccccccccc
Q 002321 907 ------LE-------------------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 907 ------~~-------------------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.. ....+..+++++.+||..||.+||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 313 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 313 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCH
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCH
Confidence 00 01113567899999999999999985
No 246
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.5e-36 Score=338.58 Aligned_cols=202 Identities=21% Similarity=0.395 Sum_probs=155.9
Q ss_pred ccC-CCcccccCceEEEEEEeC---CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEe--CCeeEEE
Q 002321 692 LNK-DCELGRGGFGAVYRTVLR---DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWT--QSLQLLI 765 (936)
Q Consensus 692 ~~~-~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 765 (936)
|+. +++||+|+||+||+|+.+ +++.||||++..... ...+.+|+.++++++||||+++++++.. ....++|
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 444 568999999999999976 478999999965432 3568899999999999999999999965 6688999
Q ss_pred EEecCCCChhhhhhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE----cCCCCeEEeecc
Q 002321 766 YEFVSGGSLHKHLHEGS------GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI----DGSGEPKVGDYG 835 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll----~~~~~~kl~Dfg 835 (936)
|||++ |+|.+++.... ....+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 99995 68888775321 11248999999999999999999999999999999999999 678899999999
Q ss_pred CccccCCCcc-ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccc
Q 002321 836 LARLLPMLDR-YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWK 897 (936)
Q Consensus 836 ~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~ 897 (936)
+++....... ........+|+.|+|||++.+...++.++||||+||++|||++|+.||....
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 9987643211 1223446789999999998666678999999999999999999999997543
No 247
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6e-36 Score=334.45 Aligned_cols=239 Identities=18% Similarity=0.204 Sum_probs=186.2
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc----------chHHHHHHHHHHHHcCCCCCcceeeeEEEeC
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV----------KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ 759 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (936)
..|+..+.||+|+||.||+|...+|+.||||++...... ...+.+.+|++++++++||||+++++++...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 456778899999999999999888999999998543221 1137789999999999999999999998543
Q ss_pred -----CeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeec
Q 002321 760 -----SLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDY 834 (936)
Q Consensus 760 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (936)
...++||||++ |+|.+++.... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+||
T Consensus 102 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Df 178 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF 178 (362)
T ss_dssp CTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCT
T ss_pred cCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEec
Confidence 35799999997 78888887543 24899999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH-------
Q 002321 835 GLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL------- 907 (936)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~------- 907 (936)
|+++..... .......+++.|+|||++.+...++.++||||+||++|||++|+.||..............
T Consensus 179 g~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 255 (362)
T 3pg1_A 179 NLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255 (362)
T ss_dssp TC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred Ccccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 999754322 2234456888999999886656789999999999999999999999988654322211100
Q ss_pred -----------------------------HHHhhhccccceeeccccccccccccc
Q 002321 908 -----------------------------EEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 908 -----------------------------~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
.....++.+.+++.+||..||.+||+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 311 (362)
T 3pg1_A 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311 (362)
T ss_dssp HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCH
Confidence 001123457789999999999999985
No 248
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-36 Score=326.21 Aligned_cols=236 Identities=23% Similarity=0.312 Sum_probs=187.4
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeC-CeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQ-SLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e 767 (936)
...|+..+.||+|+||.||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 345788889999999999999885 8899999986542 457789999999999999999999997654 46899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcccc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYV 847 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 847 (936)
|+++++|.+++..... ..+++..+.+++.|+++||+|||++|++||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred cCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc----
Confidence 9999999999976431 23788999999999999999999999999999999999999999999999999755322
Q ss_pred ccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-----HHHHhhhccccceee
Q 002321 848 LSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-----LEEHWKKAEWRNVSM 921 (936)
Q Consensus 848 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 921 (936)
.....+++.|+|||.+ ....++.++||||+|+++|||++ |+.||............. ..+...++.+.+++.
T Consensus 171 -~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 248 (278)
T 1byg_A 171 -QDTGKLPVKWTAPEAL-REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 248 (278)
T ss_dssp ------CCTTTSCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHH
T ss_pred -ccCCCccccccCHHHh-CCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHH
Confidence 1233567889999988 45578999999999999999998 999998765533221110 011233467889999
Q ss_pred cccccccccccccC
Q 002321 922 RSCKGSSRQRRRFQ 935 (936)
Q Consensus 922 ~~l~~~p~~Rp~f~ 935 (936)
+||..||.+||+++
T Consensus 249 ~~l~~~p~~Rps~~ 262 (278)
T 1byg_A 249 NCWHLDAAMRPSFL 262 (278)
T ss_dssp HHTCSSGGGSCCHH
T ss_pred HHhcCChhhCCCHH
Confidence 99999999999863
No 249
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=7.7e-36 Score=323.65 Aligned_cols=239 Identities=16% Similarity=0.171 Sum_probs=191.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEE-EeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYY-WTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 767 (936)
..|+..+.||+|+||.||+|+.. +++.||||++..... .+.+.+|+.++++++|++++..+.++ ......++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 45677889999999999999974 689999999865532 34688999999999988877666655 56677899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE---cCCCCeEEeeccCccccCCCc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI---DGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
|+ +++|.+++..... .+++.++..++.|++.||+|||+++|+||||||+||++ +.++.+||+|||+++......
T Consensus 86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred ec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 99 9999999975432 38999999999999999999999999999999999999 488999999999998765432
Q ss_pred cc-----cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh----HHH---HHHHHH--H-
Q 002321 845 RY-----VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM----WWF---SVTWLE--E- 909 (936)
Q Consensus 845 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~----~~~---~~~~~~--~- 909 (936)
.. .......+++.|+|||.+. +..++.++||||+||++|||++|+.||...+.. ... ...... +
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 241 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred cccccccccccccccccccCChhhhc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHH
Confidence 21 1234567899999999984 456899999999999999999999999874321 111 111111 1
Q ss_pred --HhhhccccceeecccccccccccccC
Q 002321 910 --HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 --~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...++.+.+++.+||..||.+||+++
T Consensus 242 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ 269 (296)
T 3uzp_A 242 LCKGYPSEFATYLNFCRSLRFDDKPDYS 269 (296)
T ss_dssp HTTTSCHHHHHHHHHHHTSCTTCCCCHH
T ss_pred HHhhCCHHHHHHHHHHHhcCcCcCCCHH
Confidence 22357789999999999999999874
No 250
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.8e-36 Score=326.68 Aligned_cols=240 Identities=22% Similarity=0.238 Sum_probs=186.7
Q ss_pred ccccCCCcccccCceEEEEEEeCC-CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEE-----------
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRD-GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYW----------- 757 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 757 (936)
..|+..+.||+|+||.||+|+... ++.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 346778899999999999999874 8999999987543 234577899999999999999999999874
Q ss_pred ---eCCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc-CCCCeEEee
Q 002321 758 ---TQSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID-GSGEPKVGD 833 (936)
Q Consensus 758 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~-~~~~~kl~D 833 (936)
+....++||||++ |+|.+++... .+++..+..++.|++.||+|||++||+||||||+||+++ +++.+||+|
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3457799999997 6999998653 289999999999999999999999999999999999997 567999999
Q ss_pred ccCccccCCCcc-ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH----
Q 002321 834 YGLARLLPMLDR-YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE---- 908 (936)
Q Consensus 834 fg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~---- 908 (936)
||+++....... ........+++.|+|||.+.....++.++||||+||++|||++|+.||...+...........
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999986542211 112233456888999998866567899999999999999999999999887653222110000
Q ss_pred ------------------------------HHhhhccccceeecccccccccccccC
Q 002321 909 ------------------------------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 ------------------------------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
....+..+.+++.+||..||.+||+.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 301 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHH
Confidence 011356788999999999999999863
No 251
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.9e-36 Score=327.32 Aligned_cols=241 Identities=20% Similarity=0.295 Sum_probs=190.2
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCC--CCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVR--HPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|+..+++.||||++...... ...+.+.+|++++++++ |+||+++++++......++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 457888899999999999999988999999999755432 34577899999999997 599999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
| +.+++|.+++.... .+++.++..++.|+++||+|||+++|+||||||+||+++ ++.+||+|||+++........
T Consensus 108 e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence 9 45899999998754 389999999999999999999999999999999999997 489999999999876443333
Q ss_pred cccccccCcccccCcccccC----------cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH-------H
Q 002321 847 VLSSKIQSALGYMAPEFACR----------TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE-------E 909 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~----------~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~-------~ 909 (936)
.......+++.|+|||.+.. ...++.++||||+||++|||++|+.||............... +
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 262 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCc
Confidence 23345568999999998843 136788999999999999999999999875432222111111 1
Q ss_pred HhhhccccceeecccccccccccccC
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...+..+.+++.+||..||.+||+++
T Consensus 263 ~~~~~~l~~li~~~l~~dp~~Rps~~ 288 (313)
T 3cek_A 263 DIPEKDLQDVLKCCLKRDPKQRISIP 288 (313)
T ss_dssp CCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred ccchHHHHHHHHHHccCCcccCcCHH
Confidence 22245688999999999999999863
No 252
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=333.22 Aligned_cols=245 Identities=21% Similarity=0.309 Sum_probs=177.7
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CCCcceeeeEEE--------e
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HPNLVTLEGYYW--------T 758 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~ 758 (936)
...|+..++||+|+||.||+|++. +++.||||++.... ....+.+.+|+.+++++. ||||+++++++. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 345788889999999999999975 68999999985543 234567899999999996 999999999994 2
Q ss_pred CCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCCCCEEEcCCCCeEEeeccC
Q 002321 759 QSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSN--IIHYNIKSSNVLIDGSGEPKVGDYGL 836 (936)
Q Consensus 759 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (936)
....++||||++ |+|.+++........+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 345789999995 799998876433345999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCcccc----------ccccccCcccccCccccc--CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHH
Q 002321 837 ARLLPMLDRYV----------LSSKIQSALGYMAPEFAC--RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSV 904 (936)
Q Consensus 837 a~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~ 904 (936)
++......... ......+++.|+|||++. ....++.++||||+||++|||++|+.||...........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 264 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG 264 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC
Confidence 98764322211 111345888999999873 344678999999999999999999999987655322211
Q ss_pred HH--HHHHhhhccccceeecccccccccccccC
Q 002321 905 TW--LEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 905 ~~--~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.. ..+......+.+++.+||..||.+||+++
T Consensus 265 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 297 (337)
T 3ll6_A 265 KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIA 297 (337)
T ss_dssp -CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHH
T ss_pred cccCCcccccchHHHHHHHHHccCChhhCcCHH
Confidence 11 11222336688999999999999999863
No 253
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.8e-36 Score=328.44 Aligned_cols=242 Identities=24% Similarity=0.337 Sum_probs=190.6
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEe------CC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWT------QS 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~~ 760 (936)
...|+..+.||+|+||.||+|++. +++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 345778889999999999999975 68999999986543 2357789999999999 79999999999987 45
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCcccc
Q 002321 761 LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLL 840 (936)
Q Consensus 761 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 840 (936)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++...
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred eEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 7899999999999999998643 224889999999999999999999999999999999999999999999999999765
Q ss_pred CCCccccccccccCcccccCcccccC----cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------HH
Q 002321 841 PMLDRYVLSSKIQSALGYMAPEFACR----TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------EH 910 (936)
Q Consensus 841 ~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~~ 910 (936)
.... .......+++.|+|||++.. ...++.++||||+||++|||++|+.||............... ..
T Consensus 180 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 2x7f_A 180 DRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSK 257 (326)
T ss_dssp -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCS
T ss_pred CcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCcc
Confidence 4221 12234568899999998842 346889999999999999999999999876654322111100 01
Q ss_pred hhhccccceeecccccccccccccC
Q 002321 911 WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 911 ~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..+..+.+++.+||..||.+||+++
T Consensus 258 ~~~~~l~~li~~~l~~dp~~Rps~~ 282 (326)
T 2x7f_A 258 KWSKKFQSFIESCLVKNHSQRPATE 282 (326)
T ss_dssp CSCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred ccCHHHHHHHHHHhccChhhCCCHH
Confidence 1246688999999999999999863
No 254
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.3e-35 Score=332.44 Aligned_cols=234 Identities=20% Similarity=0.247 Sum_probs=189.6
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee-----
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ----- 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 762 (936)
..|...+.||+|+||.||+|++. +|+.||||++...... ...+.+.+|+.++++++||||+++++++......
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 45677889999999999999976 5899999999754332 2357788999999999999999999999876654
Q ss_pred -EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 763 -LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 763 -~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999996 788887743 28999999999999999999999999999999999999999999999999998653
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH--------------
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-------------- 907 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-------------- 907 (936)
.. .....+|+.|+|||++.+...++.++||||+||++|||++|+.||...+..........
T Consensus 196 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 196 AE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred cC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence 21 23456789999999986656789999999999999999999999988654322211100
Q ss_pred --------H-------------HHhhhccccceeeccccccccccccc
Q 002321 908 --------E-------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 908 --------~-------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
. ....++.+.+++.+||..||.+||+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 318 (371)
T 4exu_A 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTA 318 (371)
T ss_dssp CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCH
Confidence 0 01124678899999999999999985
No 255
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.3e-35 Score=338.22 Aligned_cols=200 Identities=20% Similarity=0.231 Sum_probs=171.1
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcC------CCCCcceeeeEEEeCCee
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV------RHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 762 (936)
..|+..+.||+|+||+||+|+.. +++.||||+++... .....+.+|+++++.+ +|+||+++++++......
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 34778889999999999999876 48999999996542 3346678888888877 577999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC--eEEeeccCcccc
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE--PKVGDYGLARLL 840 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~ 840 (936)
++||||+. ++|.+++...... .+++..+.+++.|++.||+|||+++|+||||||+|||++.++. +||+|||+++..
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQ-GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEEEeccC-CCHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 99999995 7999998875432 3899999999999999999999999999999999999999987 999999999764
Q ss_pred CCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh
Q 002321 841 PMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM 899 (936)
Q Consensus 841 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~ 899 (936)
... .....+|+.|+|||++. +..++.++||||+||++|||++|+.||...+..
T Consensus 253 ~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 305 (429)
T 3kvw_A 253 HQR-----VYTYIQSRFYRAPEVIL-GARYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305 (429)
T ss_dssp TCC-----CCSSCSCGGGCCHHHHH-TBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred CCc-----ccccCCCCCccChHHHh-CCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 321 23456889999999985 446899999999999999999999999887653
No 256
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.2e-37 Score=343.95 Aligned_cols=237 Identities=14% Similarity=0.045 Sum_probs=174.3
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcC--CCCCcceee-------eEEEe
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKV--RHPNLVTLE-------GYYWT 758 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~~ 758 (936)
.|+..+.||+|+||.||+|++. +|+.||||++...... ...+.+.+|+.+++.+ +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 3677889999999999999976 6899999999775432 3356677885444444 799988754 45543
Q ss_pred C-----------------CeeEEEEEecCCCChhhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHHHhCCcccCC
Q 002321 759 Q-----------------SLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNER------FNVIQGTAKSLAHLHQSNIIHYN 815 (936)
Q Consensus 759 ~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------~~i~~~i~~al~~LH~~~ivH~D 815 (936)
. ...++||||++ |+|.+++..... .+.+..+ ..++.|+++||+|||++||+|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 3 23699999998 899999986422 1344445 67889999999999999999999
Q ss_pred CCCCCEEEcCCCCeEEeeccCccccCCCccccccccccCcccccCcccccC-cccCCchhhHHHHHHHHHHHHcCCCCCC
Q 002321 816 IKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACR-TVKITDKCDVYGFGVLVLEVVTGKRPLS 894 (936)
Q Consensus 816 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~DvwSlG~~l~el~~g~~Pf~ 894 (936)
|||+|||++.++.+||+|||+++...... ....+++.|+|||++.+ ...++.++||||+||++|||++|+.||.
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999998654211 13445689999999853 1578999999999999999999999998
Q ss_pred ccchhHHH-------------HHHHHHHHhhhccccceeecccccccccccccC
Q 002321 895 TWKMMWWF-------------SVTWLEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 895 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
........ ...+......++.+.+++.+||..||.+||+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 348 (371)
T 3q60_A 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPL 348 (371)
T ss_dssp BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHH
T ss_pred CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 76321100 000001123457788999999999999999863
No 257
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-35 Score=324.64 Aligned_cols=259 Identities=32% Similarity=0.523 Sum_probs=218.8
Q ss_pred CccceecccCceecc--ccCcccccccccceEEccC-CcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccc
Q 002321 293 ESLETLDLSGNKFSG--AVPISIGNLQRLKVLNFSA-NRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKV 369 (936)
Q Consensus 293 ~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l 369 (936)
.+++.|+|++|.+++ .+|..+.++++|++|+|++ |.+++.+|..|.++++|++|++++|.+.+.+|..
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~--------- 120 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF--------- 120 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGG---------
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHH---------
Confidence 356677777777776 6677777777777777774 7777777777777777777777777776544432
Q ss_pred cccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcc-cCCeeecC
Q 002321 370 SFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLK-ALNVLDLS 448 (936)
Q Consensus 370 ~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls 448 (936)
+..+++|++|+|++|.+++.+|..+..+++|++|+|++|++++.+|..++.++ +|++|+|+
T Consensus 121 ------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~ 182 (313)
T 1ogq_A 121 ------------------LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182 (313)
T ss_dssp ------------------GGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECC
T ss_pred ------------------HhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECc
Confidence 23467788888888888888888888888999999999999888888888887 89999999
Q ss_pred CccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCC
Q 002321 449 ENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGL 528 (936)
Q Consensus 449 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 528 (936)
+|++++.+|..+..+. |+.|+|++|++++.+|..|..+++|++|+|++|++++.+|. +..+++|++|+|++|++++.+
T Consensus 183 ~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~ 260 (313)
T 1ogq_A 183 RNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTL 260 (313)
T ss_dssp SSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECC
T ss_pred CCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcC
Confidence 9999988888888887 99999999999988999999999999999999999977665 888999999999999999999
Q ss_pred CcccccccccCeeecCCCcccccCCCCCccCcCCCccccCCCCCCCCCCCCCC
Q 002321 529 PKQLVNLVHLSSFNISHNHLQGELPAGGFFNTISPSSVLGNPSLCGSAVNKSC 581 (936)
Q Consensus 529 p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~~c~~~~~~~~ 581 (936)
|..+..+++|+.|+|++|+++|.+|..+.+..+....+.+||++||.|+. .|
T Consensus 261 p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 261 PQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred ChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 99999999999999999999999999988999999999999999999885 46
No 258
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.3e-36 Score=327.80 Aligned_cols=246 Identities=20% Similarity=0.295 Sum_probs=191.8
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEe----CCeeE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWT----QSLQL 763 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 763 (936)
...|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 456788889999999999999974 68999999986543 2346778999999999999999999999973 34678
Q ss_pred EEEEecCCCChhhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 764 LIYEFVSGGSLHKHLHEGS-GGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
+||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+.+|+||||||+||+++.++.+||+|||.++....
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 9999999999999987631 223489999999999999999999999999999999999999999999999999876532
Q ss_pred Cccc-------cccccccCcccccCcccccCcc--cCCchhhHHHHHHHHHHHHcCCCCCCccchh---HHHHHH----H
Q 002321 843 LDRY-------VLSSKIQSALGYMAPEFACRTV--KITDKCDVYGFGVLVLEVVTGKRPLSTWKMM---WWFSVT----W 906 (936)
Q Consensus 843 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~--~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~---~~~~~~----~ 906 (936)
.... .......+++.|+|||.+.... .++.++||||+||++|||++|+.||...... ...... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 266 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--C
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCC
Confidence 1110 0112344688999999884332 3688999999999999999999999653211 001000 0
Q ss_pred HHHHhhhccccceeecccccccccccccC
Q 002321 907 LEEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 907 ~~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
......+..+.+++.+||..||.+||+++
T Consensus 267 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 295 (317)
T 2buj_A 267 PQSPRHSSALWQLLNSMMTVDPHQRPHIP 295 (317)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CccccCCHHHHHHHHHHhhcChhhCCCHH
Confidence 01122346788999999999999999864
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.3e-35 Score=325.82 Aligned_cols=270 Identities=17% Similarity=0.259 Sum_probs=193.9
Q ss_pred CCChhHHHHHHHHHHhcc-CCCCCCCCCC---CCCCCCccceeEEecC--------CCCceEEeccCCCCCCcccccccc
Q 002321 30 PSLNDDVLGLIVFKADIQ-DPNGKLSSWS---EDDDTPCNWFGVKCSP--------RSNRVIELTLNGLSLTGRIGRGLL 97 (936)
Q Consensus 30 ~~~~~~~~aLl~~k~~~~-d~~~~l~sW~---~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~g~~~~~l~ 97 (936)
.+..+|++||++||+++. |+.+.+++|. ....++|.|.||.|+. ...+|+.|+|++++++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 356789999999999994 8877889994 2234489999999952 3478999999999998 8888899
Q ss_pred cCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccc------
Q 002321 98 QLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSL------ 171 (936)
Q Consensus 98 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~------ 171 (936)
++++|++|+|++|+|+ .+|..|+++++|++|+|++|+++ .+|.. |..+++|++|+|++|++.+.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~-l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPAS-IASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGG-GGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHH-HhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 9999999999999998 78889999999999999999998 77754 688999999999998888888887664
Q ss_pred ---cccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcc
Q 002321 172 ---CSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLR 248 (936)
Q Consensus 172 ---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 248 (936)
+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++ +|..+..+++|++|+|++|++.+.+|..|+.+++|+
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 666666666666666 455556666666666666666663 444566666666666666666666666666666666
Q ss_pred eeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCcee
Q 002321 249 TIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKF 305 (936)
Q Consensus 249 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 305 (936)
+|+|++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.+++..|.+
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 666666655555555555555555555555555555555555555555555554433
No 260
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=327.04 Aligned_cols=243 Identities=26% Similarity=0.371 Sum_probs=194.5
Q ss_pred cccccCCCcccccCceEEEEEEe-----CCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCC--e
Q 002321 689 HALLNKDCELGRGGFGAVYRTVL-----RDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQS--L 761 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~ 761 (936)
...|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 44567788999999999999984 358899999986542 344678999999999999999999999987644 6
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||+++++|.+++..... .+++.++++++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 7899999999999999987532 38999999999999999999999999999999999999999999999999998765
Q ss_pred CCccc-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH--------------HHHH
Q 002321 842 MLDRY-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF--------------SVTW 906 (936)
Q Consensus 842 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~--------------~~~~ 906 (936)
..... .......++..|+|||.+. ...++.++||||+||++|||++|..||......... ....
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHH-HCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhc-CCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 43322 1223345677899999884 446889999999999999999999998754221100 0011
Q ss_pred HH-------HHhhhccccceeecccccccccccccC
Q 002321 907 LE-------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 907 ~~-------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.. +...+..+.+++.+||..||.+||+++
T Consensus 276 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 311 (326)
T 2w1i_A 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 311 (326)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred hhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHH
Confidence 11 112346788999999999999999863
No 261
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.3e-35 Score=318.31 Aligned_cols=238 Identities=22% Similarity=0.315 Sum_probs=195.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCc-cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL-VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
...|+..+.||+|+||.||+|+.. +++.||||++..... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 345788889999999999999986 689999999965433 234678999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC---CCeEEeeccCccccCCC
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS---GEPKVGDYGLARLLPML 843 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~ 843 (936)
||+++++|.+++..... +++.++..++.|++.||+|||++|++||||||+||+++.+ +.+||+|||+++.....
T Consensus 101 e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 101 ELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred EccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 99999999998876543 8999999999999999999999999999999999999764 47999999999865432
Q ss_pred ccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------H--Hhhhcc
Q 002321 844 DRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------E--HWKKAE 915 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~--~~~~~~ 915 (936)
. ......+++.|+|||.+. + .++.++||||+|+++|+|++|+.||............... + ...+..
T Consensus 178 ~---~~~~~~~~~~y~aPE~~~-~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (287)
T 2wei_A 178 T---KMKDRIGTAYYIAPEVLR-G-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD 252 (287)
T ss_dssp S---SCSCHHHHHTTCCHHHHT-T-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHH
T ss_pred C---ccccccCcccccChHHhc-C-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHH
Confidence 2 122345788899999884 3 4789999999999999999999999886654322111000 1 123456
Q ss_pred ccceeeccccccccccccc
Q 002321 916 WRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f 934 (936)
+.+++.+||..||.+||++
T Consensus 253 ~~~li~~~l~~dp~~Rps~ 271 (287)
T 2wei_A 253 AKDLIRKMLTFHPSLRITA 271 (287)
T ss_dssp HHHHHHHHTCSSGGGSCCH
T ss_pred HHHHHHHHcccChhhCcCH
Confidence 7889999999999999986
No 262
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.7e-35 Score=336.16 Aligned_cols=239 Identities=16% Similarity=0.192 Sum_probs=193.0
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCC-CCcceeeeEEEeCCeeEEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRH-PNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 767 (936)
..|+..++||+|+||.||+|++. +++.||||++..... ...+.+|+++++.++| +++..+..++......++|||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 45788899999999999999975 689999998865433 2457899999999987 556666666777888899999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE---cCCCCeEEeeccCccccCCCc
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI---DGSGEPKVGDYGLARLLPMLD 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~ 844 (936)
|+ +++|.+++..... .+++.+++.|+.||+.||+|||+++|+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 84 ~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred CC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 99 9999999975432 38999999999999999999999999999999999999 688999999999998765432
Q ss_pred c-----ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH-HHH-HHHH---------
Q 002321 845 R-----YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW-FSV-TWLE--------- 908 (936)
Q Consensus 845 ~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~-~~~-~~~~--------- 908 (936)
. ........+|+.|+|||++. +..++.++|||||||++|||++|+.||........ ... ....
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHL-GIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHT-TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred cccccccccccccCCCccccCHHHhc-CCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 2 11223567899999999984 55789999999999999999999999987543111 100 0000
Q ss_pred -HHhhhccccceeecccccccccccccC
Q 002321 909 -EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 909 -~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
....+.++.+++.+||..||.+||+|+
T Consensus 240 l~~~~p~~l~~li~~cl~~dP~~RPs~~ 267 (483)
T 3sv0_A 240 LCRGYPTEFASYFHYCRSLRFDDKPDYS 267 (483)
T ss_dssp HHTTSCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred HhcCCcHHHHHHHHHHhcCChhhCcCHH
Confidence 122357799999999999999999874
No 263
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.5e-36 Score=323.94 Aligned_cols=243 Identities=26% Similarity=0.341 Sum_probs=186.9
Q ss_pred cccccCCCcccccCceEEEEEEeC--CCc--EEEEEEeeccCc--cchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR--DGR--PVAIKKLTVSSL--VKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (936)
...|+..+.||+|+||.||+|++. +++ .||||+++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 345778889999999999999864 233 689999865432 234578899999999999999999999998765 7
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
++||||+++++|.+++.... ..+++..+.+++.|+++||+|||+++++||||||+||+++.++.+||+|||+++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 89999999999999997643 2389999999999999999999999999999999999999999999999999987654
Q ss_pred Cccc-cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH------HHHhhhc
Q 002321 843 LDRY-VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL------EEHWKKA 914 (936)
Q Consensus 843 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~------~~~~~~~ 914 (936)
.... .......+++.|+|||.+ ....++.++||||+|+++|||++ |+.||...+.......... .+...++
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESL-KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 252 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHH-HHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCH
T ss_pred cccchhhhccCCCCceeeCchhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCH
Confidence 3221 223345567789999988 44568899999999999999999 9999988765432211110 0123446
Q ss_pred cccceeecccccccccccccC
Q 002321 915 EWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 915 ~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+.+++.+||..||.+||+++
T Consensus 253 ~l~~li~~~l~~~p~~Rps~~ 273 (291)
T 1u46_A 253 DIYNVMVQCWAHKPEDRPTFV 273 (291)
T ss_dssp HHHHHHHHHTCSSGGGSCCHH
T ss_pred HHHHHHHHHccCCcccCcCHH
Confidence 788999999999999999874
No 264
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.2e-35 Score=329.61 Aligned_cols=241 Identities=21% Similarity=0.242 Sum_probs=179.6
Q ss_pred ccccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCe-----
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSL----- 761 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 761 (936)
....|+..+.||+|+||.||+|+.. +|+.||||++..... ......+|++.++.++||||+++++++.....
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 3456788899999999999999986 589999999865432 23456678888899999999999999976433
Q ss_pred --eEEEEEecCCCChhhhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHHH--hCCcccCCCCCCCEEEcC-CCCeEEeecc
Q 002321 762 --QLLIYEFVSGGSLHKHLHE-GSGGNFLSWNERFNVIQGTAKSLAHLH--QSNIIHYNIKSSNVLIDG-SGEPKVGDYG 835 (936)
Q Consensus 762 --~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~al~~LH--~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg 835 (936)
.++||||+++ ++.+.+.. ......+++..+..++.|++.|+.||| ++||+||||||+||+++. ++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 6899999975 55444332 222334889999999999999999999 999999999999999997 8999999999
Q ss_pred CccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH--------
Q 002321 836 LARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-------- 907 (936)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-------- 907 (936)
+++...... ......+|+.|+|||++.+...++.++||||+||++|||++|+.||...+..........
T Consensus 178 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 254 (360)
T 3e3p_A 178 SAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE 254 (360)
T ss_dssp TCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred CceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHH
Confidence 998664322 223456799999999986666689999999999999999999999988765322211100
Q ss_pred --H--------------------HHh------hhccccceeeccccccccccccc
Q 002321 908 --E--------------------EHW------KKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 908 --~--------------------~~~------~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
. ..+ .+..+.+++.+||..||.+||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 309 (360)
T 3e3p_A 255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309 (360)
T ss_dssp HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCH
Confidence 0 000 23567889999999999999985
No 265
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.1e-35 Score=323.70 Aligned_cols=240 Identities=21% Similarity=0.273 Sum_probs=190.2
Q ss_pred cccccCCCcccccCceEEEEEEeC--CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcC---CCCCcceeeeEEE-----
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR--DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKV---RHPNLVTLEGYYW----- 757 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~h~niv~l~~~~~----- 757 (936)
...|+..+.||+|+||.||+|+.. +|+.||||+++..... .....+.+|+.+++++ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 345788889999999999999983 5889999998654322 1123566777777666 8999999999987
Q ss_pred eCCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCc
Q 002321 758 TQSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLA 837 (936)
Q Consensus 758 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (936)
.....++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred CCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence 4567789999997 699999976543 23899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH------H--
Q 002321 838 RLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE------E-- 909 (936)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~------~-- 909 (936)
+..... .......+++.|+|||++. ...++.++||||+||++|||++|+.||............... .
T Consensus 168 ~~~~~~---~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 168 RIYSFQ---MALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCCCGG---GGGCCCCCCCTTCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred ccccCC---CCccccccccceeCHHHHh-cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence 765422 2234456889999999984 446899999999999999999999999887653322111100 0
Q ss_pred -----------------------Hhhhccccceeeccccccccccccc
Q 002321 910 -----------------------HWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 910 -----------------------~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
...+..+++++.+||..||.+||+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 291 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCH
Confidence 0122345688999999999999975
No 266
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.5e-35 Score=353.95 Aligned_cols=241 Identities=23% Similarity=0.283 Sum_probs=193.7
Q ss_pred ccccCCCcccccCceEEEEEEeCC----CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRD----GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (936)
..|+..+.||+|+||.||+|++.. +..||||+++........+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 456777889999999999999752 45799999876544445678999999999999999999999985 4567999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||+++|+|.+++.... ..+++..++.++.|+++||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 469 ~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 99999999999998643 2389999999999999999999999999999999999999999999999999987643222
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHHH-----HHHhhhccccce
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTWL-----EEHWKKAEWRNV 919 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 919 (936)
.......+++.|+|||++ ....++.++||||+||++|||++ |..||.+.+.......... .+...+..+.++
T Consensus 547 -~~~~~~~~t~~y~aPE~~-~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l 624 (656)
T 2j0j_A 547 -YKASKGKLPIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 624 (656)
T ss_dssp --------CCGGGCCHHHH-HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred -eeccCCCCCcceeCHHHh-cCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHH
Confidence 222334567889999988 45578999999999999999997 9999988765432211110 112344678899
Q ss_pred eecccccccccccccC
Q 002321 920 SMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 920 ~~~~l~~~p~~Rp~f~ 935 (936)
+.+||..||.+||+++
T Consensus 625 i~~~l~~dP~~RPs~~ 640 (656)
T 2j0j_A 625 MTKCWAYDPSRRPRFT 640 (656)
T ss_dssp HHHHTCSSGGGSCCHH
T ss_pred HHHHcCCChhHCcCHH
Confidence 9999999999999874
No 267
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.8e-34 Score=317.90 Aligned_cols=307 Identities=20% Similarity=0.347 Sum_probs=181.2
Q ss_pred cccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccc
Q 002321 96 LLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTL 175 (936)
Q Consensus 96 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 175 (936)
+.++++|++|++++|+++.. + .+..+++|++|+|++|+++ .++. |..+++|++|+|++|++++. +.+..+++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 44677788888888887743 3 4777888888888888887 4444 67777888888888877742 357777777
Q ss_pred cccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccc
Q 002321 176 ATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSEN 255 (936)
Q Consensus 176 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 255 (936)
++|+|++|++++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 777777777775433 6677777777777775543333 36667777777777777664433 666667777777776
Q ss_pred ccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCCh
Q 002321 256 SFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPD 335 (936)
Q Consensus 256 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 335 (936)
.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++. .
T Consensus 188 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 259 (347)
T 4fmz_A 188 QIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--N 259 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--G
T ss_pred ccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--h
Confidence 6654322 4555555555555555543322 4444555555555555543222 44444444444444444421 2
Q ss_pred hhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhccc
Q 002321 336 SMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGAL 415 (936)
Q Consensus 336 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 415 (936)
.+..+ ++|++|++++|++++. ..+..+
T Consensus 260 ~~~~l---------------------------------------------------~~L~~L~l~~n~l~~~--~~~~~l 286 (347)
T 4fmz_A 260 AVKDL---------------------------------------------------TKLKMLNVGSNQISDI--SVLNNL 286 (347)
T ss_dssp GGTTC---------------------------------------------------TTCCEEECCSSCCCCC--GGGGGC
T ss_pred hHhcC---------------------------------------------------CCcCEEEccCCccCCC--hhhcCC
Confidence 33344 4555555555555433 234555
Q ss_pred ccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccC
Q 002321 416 SGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLA 477 (936)
Q Consensus 416 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 477 (936)
++|++|+|++|++++..+..++.+++|++|+|++|++++..| +..+++|++|++++|.|+
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 555555555555555555555555566666666666554333 555666666666666554
No 268
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=333.43 Aligned_cols=237 Identities=23% Similarity=0.302 Sum_probs=179.8
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHH--HHcCCCCCcceeeeEEEe-----CCee
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKK--LGKVRHPNLVTLEGYYWT-----QSLQ 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~ 762 (936)
..|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ....
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 3467778999999999999987 58999999986432 3334444444 556899999999986643 2356
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CcccCCCCCCCEEEcCCCCeEEee
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS---------NIIHYNIKSSNVLIDGSGEPKVGD 833 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---------~ivH~Dlkp~NIll~~~~~~kl~D 833 (936)
++||||+++|+|.+++.... .++..+.+++.|+++||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 89999999999999997654 68899999999999999999999 999999999999999999999999
Q ss_pred ccCccccCCCc------cccccccccCcccccCcccccCc------ccCCchhhHHHHHHHHHHHHcCCCCCCccchhHH
Q 002321 834 YGLARLLPMLD------RYVLSSKIQSALGYMAPEFACRT------VKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWW 901 (936)
Q Consensus 834 fg~a~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~------~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~ 901 (936)
||+++.+.... .........||+.|+|||++.+. ..++.++|||||||++|||++|..||........
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 99998764321 11222345689999999988542 3567899999999999999999777644321000
Q ss_pred ---------------HHHHH-HH--------------HHhhhccccceeecccccccccccccC
Q 002321 902 ---------------FSVTW-LE--------------EHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 902 ---------------~~~~~-~~--------------~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..... .. ....++.+.+++.+||..||.+||+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 307 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQ 307 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchH
Confidence 00000 00 001123588899999999999999864
No 269
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.2e-35 Score=319.83 Aligned_cols=239 Identities=22% Similarity=0.277 Sum_probs=184.1
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEe----------
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWT---------- 758 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 758 (936)
..|+..+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 34677789999999999999975 6899999999643 2345778999999999999999999998865
Q ss_pred ---CCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeecc
Q 002321 759 ---QSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYG 835 (936)
Q Consensus 759 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (936)
....++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 346789999999999999998643 237889999999999999999999999999999999999999999999999
Q ss_pred CccccCCCcc------------ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHH
Q 002321 836 LARLLPMLDR------------YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFS 903 (936)
Q Consensus 836 ~a~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~ 903 (936)
+++....... ........+++.|+|||++.+...++.++||||+||++|||++ ||..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~ 238 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL 238 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHH
Confidence 9976542210 1122345678899999998655578999999999999999998 665432211111
Q ss_pred HHHHH------HH---hhhccccceeecccccccccccccC
Q 002321 904 VTWLE------EH---WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 904 ~~~~~------~~---~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..... +. ..+..+++++.+||..||.+||+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 279 (303)
T 1zy4_A 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279 (303)
T ss_dssp HHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHH
Confidence 11100 01 1123468899999999999999863
No 270
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.8e-37 Score=334.39 Aligned_cols=236 Identities=22% Similarity=0.303 Sum_probs=173.6
Q ss_pred cccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHc--CCCCCcceeeeEEEeCC----eeEE
Q 002321 691 LLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGK--VRHPNLVTLEGYYWTQS----LQLL 764 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 764 (936)
.|...+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 4678889999999999999875 899999998643 34567788888887 79999999999998776 7899
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCcccCCCCCCCEEEcCCCCeEEeeccC
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLH--------QSNIIHYNIKSSNVLIDGSGEPKVGDYGL 836 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH--------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (936)
||||+++|+|.++++... +++..+++++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 79 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~ 154 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEECCTTCCHHHHHHHCC----BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC
T ss_pred EEeccCCCCHHHHHhccC----cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCc
Confidence 999999999999997643 788889999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCcccc--ccccccCcccccCcccccCcc-----cCCchhhHHHHHHHHHHHHcC----------CCCCCccchh
Q 002321 837 ARLLPMLDRYV--LSSKIQSALGYMAPEFACRTV-----KITDKCDVYGFGVLVLEVVTG----------KRPLSTWKMM 899 (936)
Q Consensus 837 a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DvwSlG~~l~el~~g----------~~Pf~~~~~~ 899 (936)
++......... ......+|+.|+|||++.+.. .++.++||||+||++|||++| +.||......
T Consensus 155 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3gxj_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp -CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-
T ss_pred ceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCC
Confidence 97654322211 123346899999999885442 344689999999999999999 7787654221
Q ss_pred -----HHHHHHH-------HHHH----hhhccccceeecccccccccccccC
Q 002321 900 -----WWFSVTW-------LEEH----WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 900 -----~~~~~~~-------~~~~----~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
....... .+.. .....+.+++.+||..||.+||+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 286 (303)
T 3gxj_A 235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL 286 (303)
T ss_dssp CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHH
T ss_pred CccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHH
Confidence 0000000 0000 1123578899999999999999874
No 271
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.7e-34 Score=318.00 Aligned_cols=309 Identities=22% Similarity=0.345 Sum_probs=222.4
Q ss_pred CchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCC
Q 002321 118 PNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLS 197 (936)
Q Consensus 118 ~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 197 (936)
..+..+++|++|++++|.+. .++. |..+++|++|+|++|++++..+ +..+++|++|+|++|++++. ..+.+++
T Consensus 38 ~~~~~l~~L~~L~l~~~~i~-~~~~--~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~ 110 (347)
T 4fmz_A 38 VTQEELESITKLVVAGEKVA-SIQG--IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLT 110 (347)
T ss_dssp ECHHHHTTCSEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCT
T ss_pred ccchhcccccEEEEeCCccc-cchh--hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCC
Confidence 35677888888888888887 4543 6777777777777777775433 66677777777777776653 2466666
Q ss_pred CCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEecc
Q 002321 198 ALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLR 277 (936)
Q Consensus 198 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 277 (936)
+|++|+|++|.+++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+.
T Consensus 111 ~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~----------------- 170 (347)
T 4fmz_A 111 NLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDV----------------- 170 (347)
T ss_dssp TCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCC-----------------
T ss_pred cCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCc-----------------
Confidence 77777777766664322 5666666666666664442322 255555555555555555432
Q ss_pred CccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCC
Q 002321 278 KNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDL 357 (936)
Q Consensus 278 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 357 (936)
.+ +..+++|++|++++|++.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+.+..
T Consensus 171 -------~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~ 237 (347)
T 4fmz_A 171 -------TP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLS 237 (347)
T ss_dssp -------GG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG
T ss_pred -------hh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCc
Confidence 22 4556666677777776664333 6667777777777777775433 677778888888888776221
Q ss_pred ChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCcccc
Q 002321 358 PQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIG 437 (936)
Q Consensus 358 p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 437 (936)
+ +..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+.
T Consensus 238 ~-----------------------------~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 238 P-----------------------------LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp G-----------------------------GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred c-----------------------------hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhc
Confidence 1 24567899999999998764 5688999999999999999864 5689
Q ss_pred CcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCcccc
Q 002321 438 DLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLT 501 (936)
Q Consensus 438 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 501 (936)
.+++|+.|+|++|++++..|..+.++++|+.|+|++|.+++..| +..+++|++|++++|+|+
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999999999998888889999999999999999997666 899999999999999986
No 272
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.4e-36 Score=331.23 Aligned_cols=238 Identities=23% Similarity=0.303 Sum_probs=194.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-----hHHHHHHHHHHHHcCC--CCCcceeeeEEEeCC
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-----SQEDFEREVKKLGKVR--HPNLVTLEGYYWTQS 760 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~ 760 (936)
...|+..+.||+|+||.||+|+.. +++.||||++....... ..+.+.+|+.++++++ |+||+++++++...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 345777889999999999999965 68999999996553321 2345778999999996 599999999999999
Q ss_pred eeEEEEEecCC-CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc-CCCCeEEeeccCcc
Q 002321 761 LQLLIYEFVSG-GSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID-GSGEPKVGDYGLAR 838 (936)
Q Consensus 761 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~ 838 (936)
..++||||+.+ ++|.+++..... +++..+..++.|+++||+|||+.+|+||||||+||+++ .++.+||+|||+++
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred cEEEEEEcCCCCccHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 99999999976 899999987543 89999999999999999999999999999999999999 78999999999998
Q ss_pred ccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHHHhhhccccc
Q 002321 839 LLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEEHWKKAEWRN 918 (936)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (936)
...... .....+++.|+|||++.....++.++|||||||++|||++|+.||...+..... ....+...++.+.+
T Consensus 199 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~ 272 (320)
T 3a99_A 199 LLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG--QVFFRQRVSSECQH 272 (320)
T ss_dssp ECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHC--CCCCSSCCCHHHHH
T ss_pred cccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcc--cccccccCCHHHHH
Confidence 764321 234568999999998855555578999999999999999999999765432110 00112234467889
Q ss_pred eeecccccccccccccC
Q 002321 919 VSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 919 ~~~~~l~~~p~~Rp~f~ 935 (936)
++.+||..||.+||+++
T Consensus 273 li~~~l~~dp~~Rps~~ 289 (320)
T 3a99_A 273 LIRWCLALRPSDRPTFE 289 (320)
T ss_dssp HHHHHTCSSGGGSCCHH
T ss_pred HHHHHccCChhhCcCHH
Confidence 99999999999999864
No 273
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.6e-35 Score=324.66 Aligned_cols=238 Identities=21% Similarity=0.284 Sum_probs=190.1
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHc--CCCCCcceeeeEEEeCC----ee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGK--VRHPNLVTLEGYYWTQS----LQ 762 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~ 762 (936)
...|+..+.||+|+||.||+|++. ++.||||++... ....+.+|++++.. ++||||+++++++.... ..
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred cccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 345788889999999999999985 899999998543 34667889998887 68999999999998775 78
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCcccCCCCCCCEEEcCCCCeEEeec
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLH--------QSNIIHYNIKSSNVLIDGSGEPKVGDY 834 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH--------~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (936)
++||||+++|+|.+++.+.. +++.++++++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 116 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp EEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred EEEEeecCCCcHHHHHhccC----ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 99999999999999997643 899999999999999999999 899999999999999999999999999
Q ss_pred cCccccCCCcccc--ccccccCcccccCcccccCcc-----cCCchhhHHHHHHHHHHHHcC----------CCCCCccc
Q 002321 835 GLARLLPMLDRYV--LSSKIQSALGYMAPEFACRTV-----KITDKCDVYGFGVLVLEVVTG----------KRPLSTWK 897 (936)
Q Consensus 835 g~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-----~~~~~~DvwSlG~~l~el~~g----------~~Pf~~~~ 897 (936)
|+++......... ......+++.|+|||++.+.. .++.++||||+||++|||++| +.||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 9997664332211 234456899999999885432 233789999999999999999 78987653
Q ss_pred hhH---HHHHHHH-H--------HH----hhhccccceeecccccccccccccC
Q 002321 898 MMW---WFSVTWL-E--------EH----WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 898 ~~~---~~~~~~~-~--------~~----~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
... ....... . .. -....+.+++.+||..||.+||+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 325 (342)
T 1b6c_B 272 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL 325 (342)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHH
T ss_pred cCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHH
Confidence 211 1111111 0 00 1123567899999999999999864
No 274
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.8e-35 Score=323.29 Aligned_cols=200 Identities=23% Similarity=0.309 Sum_probs=171.3
Q ss_pred ccccCCCcccccCceEEEEEEeC--CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCC------CcceeeeEEEeCCe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR--DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHP------NLVTLEGYYWTQSL 761 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 761 (936)
..|+..+.||+|+||.||+|.+. +++.||||+++.. ....+.+.+|++++++++|+ +++++++++.+.+.
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45778889999999999999873 5889999998643 23457788999999988665 49999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC----------------
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG---------------- 825 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~---------------- 825 (936)
.++||||+ +++|.+++..... ..+++.++.+++.|++.||+|||++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 99999999 8999999977543 34889999999999999999999999999999999999987
Q ss_pred ---CCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh
Q 002321 826 ---SGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM 899 (936)
Q Consensus 826 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~ 899 (936)
++.+||+|||+++..... .....+|+.|+|||++. +..++.++||||+||++|||++|+.||...+..
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp EESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHT-TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccCCCceEeeCcccccCccc-----cccccCCccccChHHhh-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999864321 23456899999999984 557899999999999999999999999876653
No 275
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.9e-35 Score=325.70 Aligned_cols=234 Identities=20% Similarity=0.245 Sum_probs=188.4
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCe------
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSL------ 761 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 761 (936)
..|...+.||+|+||.||+|++. +|+.||||++...... ...+.+.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 34677788999999999999976 5899999999654322 235678899999999999999999999987654
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccC
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLP 841 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 841 (936)
.++||||++ ++|.+++.. .+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 489999996 688887743 28999999999999999999999999999999999999999999999999997643
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH--------------
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL-------------- 907 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~-------------- 907 (936)
.. .....+++.|+|||++.+...++.++||||+||++|||++|+.||...+..........
T Consensus 178 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 178 AE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 21 23456789999999886656789999999999999999999999987664322111000
Q ss_pred --------H-------------HHhhhccccceeeccccccccccccc
Q 002321 908 --------E-------------EHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 908 --------~-------------~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
. ....+..+.+++.+||..||.+||+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~ 300 (353)
T 3coi_A 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTA 300 (353)
T ss_dssp CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCH
Confidence 0 01124567889999999999999985
No 276
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=328.05 Aligned_cols=242 Identities=22% Similarity=0.294 Sum_probs=191.3
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (936)
...|+..+.||+|+||.||+|++.. .||||+++..... ...+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 3457888999999999999999853 5999999654332 224567889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCc---
Q 002321 768 FVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLD--- 844 (936)
Q Consensus 768 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--- 844 (936)
|+++++|.+++.... ..+++.++..++.|++.||+|||++||+||||||+||+++ ++.+||+|||+++......
T Consensus 110 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp CCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 999999999997643 2488999999999999999999999999999999999998 7899999999987653211
Q ss_pred cccccccccCcccccCcccccC--------cccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHH--H----H
Q 002321 845 RYVLSSKIQSALGYMAPEFACR--------TVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLE--E----H 910 (936)
Q Consensus 845 ~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~--~----~ 910 (936)
.........+++.|+|||++.. ...++.++||||+||++|||++|+.||............... + .
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 266 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI 266 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCS
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcC
Confidence 1122234458889999998853 235788999999999999999999999887654322111100 0 1
Q ss_pred hhhccccceeecccccccccccccC
Q 002321 911 WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 911 ~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..+..+.+++.+||..||.+||+++
T Consensus 267 ~~~~~l~~li~~~l~~~p~~Rpt~~ 291 (319)
T 2y4i_B 267 GMGKEISDILLFCWAFEQEERPTFT 291 (319)
T ss_dssp SCCTTHHHHHHHHHCSSTTTSCCHH
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHH
Confidence 2346788999999999999999874
No 277
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.4e-34 Score=341.46 Aligned_cols=349 Identities=17% Similarity=0.137 Sum_probs=243.6
Q ss_pred CCCCCCCCCCCCCc-c---ceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCC
Q 002321 51 GKLSSWSEDDDTPC-N---WFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNL 126 (936)
Q Consensus 51 ~~l~sW~~~~~~~c-~---w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 126 (936)
..+++|.++.+ || . |.++.|+.. ++....... ....-..+++++.|++++|.++...+..|.++++|
T Consensus 7 ~~l~~~~~~~~-C~~~~~~~~c~~~~~~------i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L 77 (597)
T 3oja_B 7 YNVKPRQPEYK-CIDSNLQYDCVFYDVH------IDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77 (597)
T ss_dssp ----CCCSEEC-CCCC--CCSEEECSCE------ECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCC
T ss_pred ccccCCCCCCc-CcccCcCceeEecCce------ecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCCC
Confidence 35789998777 45 3 776666521 111111111 11122357889999999999997666678999999
Q ss_pred cEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCC
Q 002321 127 RVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSD 206 (936)
Q Consensus 127 ~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 206 (936)
++|+|++|.|+ .+++..|..+++|++|+|++|.|++..|..|+.+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 78 ~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~ 156 (597)
T 3oja_B 78 ELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSN 156 (597)
T ss_dssp SEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEECCCCCCC-CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeC
Confidence 99999999999 57777899999999999999999999999999999999999999999987777789999999999999
Q ss_pred CCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCC
Q 002321 207 NLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVP 286 (936)
Q Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 286 (936)
|.+++..|..|.++++|++|+|++|.+++. .+..+++|++|++++|.+++ +.....|+.|++++|.++...+
T Consensus 157 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~ 228 (597)
T 3oja_B 157 NNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRG 228 (597)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEEC
T ss_pred CcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccc
Confidence 999998888999999999999999999965 36678899999999998874 2333456666666666653322
Q ss_pred cccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCC
Q 002321 287 KWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGL 366 (936)
Q Consensus 287 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l 366 (936)
.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+
T Consensus 229 ~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l------------- 290 (597)
T 3oja_B 229 PV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL------------- 290 (597)
T ss_dssp SC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCC-------------
T ss_pred cc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCC-------------
Confidence 21 2355555555555553 23455555555555555555555555555555555555555544
Q ss_pred ccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeee
Q 002321 367 NKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLD 446 (936)
Q Consensus 367 ~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 446 (936)
++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 291 --------------------------------------~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 291 --------------------------------------VA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp --------------------------------------CE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred --------------------------------------CC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 42 2333344555555555555555 3455555566666666
Q ss_pred cCCccccccCCCCCCCcCCCcEEEecCCccCC
Q 002321 447 LSENWLNGSIPPEIGGAYSLKELRLERNFLAG 478 (936)
Q Consensus 447 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 478 (936)
|++|.+++. | +..+++|+.|+|++|.+++
T Consensus 331 L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 331 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 666666542 2 5566777888888887764
No 278
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.7e-35 Score=323.87 Aligned_cols=235 Identities=20% Similarity=0.248 Sum_probs=165.2
Q ss_pred ccccCC-CcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEe----CCeeE
Q 002321 690 ALLNKD-CELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWT----QSLQL 763 (936)
Q Consensus 690 ~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 763 (936)
..|... +.||+|+||.||+|+.+ +|+.||||++... .....+....++.++||||+++++++.. ....+
T Consensus 28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 445663 46999999999999987 6899999998543 2222233344667799999999999976 44578
Q ss_pred EEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC---CCCeEEeeccCcccc
Q 002321 764 LIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG---SGEPKVGDYGLARLL 840 (936)
Q Consensus 764 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~ 840 (936)
+||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++||+||||||+||+++. ++.+||+|||+++..
T Consensus 103 lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 99999999999999986542 34899999999999999999999999999999999999986 455999999999865
Q ss_pred CCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH-----HHHHHHH------
Q 002321 841 PMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF-----SVTWLEE------ 909 (936)
Q Consensus 841 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~-----~~~~~~~------ 909 (936)
... ......+++.|+|||++ ....++.++||||+||++|||++|+.||......... .......
T Consensus 182 ~~~----~~~~~~~t~~y~aPE~~-~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (336)
T 3fhr_A 182 TQN----ALQTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256 (336)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTT
T ss_pred ccc----ccccCCCCcCccChhhh-CCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchh
Confidence 422 12345678999999988 4557899999999999999999999999776543221 0000000
Q ss_pred -HhhhccccceeecccccccccccccC
Q 002321 910 -HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 -~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...++.+.+++.+||..||.+||+++
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ 283 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTIT 283 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHH
Confidence 12346788999999999999999863
No 279
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.6e-35 Score=326.09 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=174.0
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHH-HHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVK-KLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
...|+..+.||+|+||.||+|+.. +|+.||||+++.........++.+|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 445778889999999999999986 689999999976544444556666666 677789999999999999999999999
Q ss_pred EecCCCChhhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCCEEEcCCCCeEEeeccCccccCCC
Q 002321 767 EFVSGGSLHKHLHEG--SGGNFLSWNERFNVIQGTAKSLAHLHQS-NIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPML 843 (936)
Q Consensus 767 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 843 (936)
||++ |+|.+++... .....+++..+.+++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.....
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 9997 5888777531 1123489999999999999999999998 9999999999999999999999999999765422
Q ss_pred ccccccccccCcccccCccccc---CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHH---H-------HH
Q 002321 844 DRYVLSSKIQSALGYMAPEFAC---RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWL---E-------EH 910 (936)
Q Consensus 844 ~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~---~-------~~ 910 (936)
. ......+++.|+|||++. ....++.++||||+||++|||++|+.||.............. . ..
T Consensus 180 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3aln_A 180 I---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER 256 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSC
T ss_pred c---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccc
Confidence 1 223346889999999873 244588999999999999999999999987543111100000 0 01
Q ss_pred hhhccccceeecccccccccccccC
Q 002321 911 WKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 911 ~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..+..+.+++.+||..||.+||+++
T Consensus 257 ~~~~~l~~li~~~l~~dp~~Rps~~ 281 (327)
T 3aln_A 257 EFSPSFINFVNLCLTKDESKRPKYK 281 (327)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHH
Confidence 2345678899999999999999874
No 280
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.1e-35 Score=332.17 Aligned_cols=198 Identities=21% Similarity=0.237 Sum_probs=166.4
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC--------CCCcceeeeEEE---
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR--------HPNLVTLEGYYW--- 757 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 757 (936)
..|+..++||+|+||+||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 45788889999999999999975 5889999999643 234577889999999995 788999999987
Q ss_pred -eCCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCCEEEcCCC--------
Q 002321 758 -TQSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS-NIIHYNIKSSNVLIDGSG-------- 827 (936)
Q Consensus 758 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~ivH~Dlkp~NIll~~~~-------- 827 (936)
.....++||||+ ++++.+++..... ..+++..+..++.|++.||+|||++ ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNY-QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence 445789999999 5677666655432 2389999999999999999999998 999999999999999776
Q ss_pred -----------------------------------------CeEEeeccCccccCCCccccccccccCcccccCcccccC
Q 002321 828 -----------------------------------------EPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACR 866 (936)
Q Consensus 828 -----------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 866 (936)
.+||+|||+++..... .....+|+.|+|||++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~- 266 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLI- 266 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHH-
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhc-
Confidence 7999999999865422 23456899999999985
Q ss_pred cccCCchhhHHHHHHHHHHHHcCCCCCCccc
Q 002321 867 TVKITDKCDVYGFGVLVLEVVTGKRPLSTWK 897 (936)
Q Consensus 867 ~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~ 897 (936)
+..++.++||||+||++|||++|+.||....
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 4468999999999999999999999997654
No 281
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=9e-35 Score=318.76 Aligned_cols=241 Identities=21% Similarity=0.285 Sum_probs=176.0
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHH-HHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQE-DFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~-~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
...|+..+.||+|+||.||+|++. +|+.||||++.......... .+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 345677889999999999999986 68999999997654433333 3445556788889999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS-NIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
||+ ++.+..+..... ..+++..+..++.|+++||+|||++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK- 179 (318)
T ss_dssp CCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc-
Confidence 999 556665554322 2389999999999999999999995 99999999999999999999999999997654322
Q ss_pred ccccccccCcccccCccccc----CcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHHH--------hhh
Q 002321 846 YVLSSKIQSALGYMAPEFAC----RTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEEH--------WKK 913 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~--------~~~ 913 (936)
......+++.|+|||++. ....++.++||||+||++|||++|+.||................. ..+
T Consensus 180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (318)
T 2dyl_A 180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFS 257 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCC
T ss_pred --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCC
Confidence 223456889999999884 244678899999999999999999999987543222211111111 134
Q ss_pred ccccceeecccccccccccccC
Q 002321 914 AEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 914 ~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
..+.+++.+||..||.+||+++
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~ 279 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYN 279 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHH
T ss_pred HHHHHHHHHHccCChhHCcCHH
Confidence 6688999999999999999864
No 282
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3e-35 Score=335.90 Aligned_cols=242 Identities=21% Similarity=0.262 Sum_probs=181.2
Q ss_pred ccccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEEE
Q 002321 688 THALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 688 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (936)
....+...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+....++||
T Consensus 13 l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 13 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp CSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 34445566789999999998776667999999998643 245678999999886 8999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC-------------CCe
Q 002321 767 EFVSGGSLHKHLHEGSGGN----FLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS-------------GEP 829 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~----~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~-------------~~~ 829 (936)
||++ |+|.+++....... ..++..+++++.|++.||+|||++||+||||||+|||++.+ +.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 9995 79999998654221 11333457899999999999999999999999999999754 489
Q ss_pred EEeeccCccccCCCccc--cccccccCcccccCcccccC------cccCCchhhHHHHHHHHHHHHc-CCCCCCccchhH
Q 002321 830 KVGDYGLARLLPMLDRY--VLSSKIQSALGYMAPEFACR------TVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMW 900 (936)
Q Consensus 830 kl~Dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~------~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~ 900 (936)
||+|||+++........ .......||+.|+|||++.+ ...++.++||||+||++|||++ |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999876532211 11234568999999998854 2468999999999999999999 999997654322
Q ss_pred HHHHHHH---------HHHhhhccccceeeccccccccccccc
Q 002321 901 WFSVTWL---------EEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 901 ~~~~~~~---------~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
....... .+...+.++.+++.+||..||.+||+.
T Consensus 248 ~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 290 (434)
T 2rio_A 248 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290 (434)
T ss_dssp HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCH
Confidence 1111100 001123567899999999999999985
No 283
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-36 Score=326.50 Aligned_cols=238 Identities=23% Similarity=0.296 Sum_probs=187.9
Q ss_pred cccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccc-----hHHHHHHHHHHHHcC----CCCCcceeeeEEEe
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVK-----SQEDFEREVKKLGKV----RHPNLVTLEGYYWT 758 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l----~h~niv~l~~~~~~ 758 (936)
...|+..+.||+|+||.||+|+.. +++.||||++....... ....+.+|+.++.++ +|+||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 345778889999999999999875 68899999996543321 223456799999998 89999999999998
Q ss_pred CCeeEEEEEe-cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc-CCCCeEEeeccC
Q 002321 759 QSLQLLIYEF-VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID-GSGEPKVGDYGL 836 (936)
Q Consensus 759 ~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~ 836 (936)
.+..++|||| +++++|.+++..... +++..+..++.|+++||+|||+.||+||||||+||+++ .++.+||+|||+
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred CCeEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 8899999999 789999999987543 89999999999999999999999999999999999999 889999999999
Q ss_pred ccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHHHhhhccc
Q 002321 837 ARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEEHWKKAEW 916 (936)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 916 (936)
++...... .....+++.|+|||++.+....+.++||||+||++|||++|+.||......... ....+...+..+
T Consensus 187 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~ 260 (312)
T 2iwi_A 187 GALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEA--ELHFPAHVSPDC 260 (312)
T ss_dssp CEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHT--CCCCCTTSCHHH
T ss_pred hhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhh--ccCCcccCCHHH
Confidence 98764322 234568899999998855544566999999999999999999999765432111 011112345678
Q ss_pred cceeecccccccccccccC
Q 002321 917 RNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 917 ~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+++.+||..||.+||+++
T Consensus 261 ~~li~~~l~~~p~~Rps~~ 279 (312)
T 2iwi_A 261 CALIRRCLAPKPSSRPSLE 279 (312)
T ss_dssp HHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHHHccCChhhCcCHH
Confidence 8999999999999999863
No 284
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.4e-34 Score=320.53 Aligned_cols=199 Identities=21% Similarity=0.320 Sum_probs=168.6
Q ss_pred ccccCCCcccccCceEEEEEEeC-CC-cEEEEEEeeccCccchHHHHHHHHHHHHcCCCCC------cceeeeEEEeCCe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DG-RPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPN------LVTLEGYYWTQSL 761 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 761 (936)
..|+..+.||+|+||+||+|+.. ++ +.||||+++.. ....+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 45778889999999999999975 34 68999998643 234567889999999997655 8999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEE------------------
Q 002321 762 QLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLI------------------ 823 (936)
Q Consensus 762 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll------------------ 823 (936)
.++||||+ ++++.+++..... ..+++.++..++.|++.||+|||++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccc
Confidence 99999999 6777777765432 248999999999999999999999999999999999999
Q ss_pred -cCCCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccch
Q 002321 824 -DGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKM 898 (936)
Q Consensus 824 -~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~ 898 (936)
+.++.+||+|||+++..... .....+|+.|+|||++. +..++.++||||+||++|||++|+.||...+.
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp EESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeee-cCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 56789999999999864322 23456899999999984 45789999999999999999999999987654
No 285
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.6e-34 Score=322.05 Aligned_cols=200 Identities=23% Similarity=0.272 Sum_probs=168.8
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CC-----CcceeeeEEEeCCee
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HP-----NLVTLEGYYWTQSLQ 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~ 762 (936)
..|+..+.||+|+||+||+|+.. +++.||||+++... ....++.+|+++++.++ |+ +|+++++++......
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 45777889999999999999976 58899999996432 23567788999998885 55 499999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--hCCcccCCCCCCCEEEc--CCCCeEEeeccCcc
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLH--QSNIIHYNIKSSNVLID--GSGEPKVGDYGLAR 838 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH--~~~ivH~Dlkp~NIll~--~~~~~kl~Dfg~a~ 838 (936)
++||||++ |+|.+++..... ..+++..+..++.|++.||+||| +.||+||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999995 699999987542 23899999999999999999999 57999999999999994 57889999999998
Q ss_pred ccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchh
Q 002321 839 LLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMM 899 (936)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~ 899 (936)
..... .....+|+.|+|||++. +..++.++||||+||++|||++|+.||...+..
T Consensus 210 ~~~~~-----~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 264 (382)
T 2vx3_A 210 QLGQR-----IYQYIQSRFYRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264 (382)
T ss_dssp ETTCC-----CCSSCSCGGGCCHHHHT-TCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ecccc-----cccccCCccccChHHHc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 66422 23456889999999985 446899999999999999999999999886653
No 286
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.6e-35 Score=342.47 Aligned_cols=242 Identities=27% Similarity=0.331 Sum_probs=192.7
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEe------CCee
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWT------QSLQ 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~ 762 (936)
..|+..+.||+|+||.||+|.+. +|+.||||+++........+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 45788999999999999999975 5899999998765444556789999999999999999999998765 5677
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCC---eEEeeccCccc
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGE---PKVGDYGLARL 839 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg~a~~ 839 (936)
++||||+++|+|.+++........+++..+..++.|++.||+|||+.||+||||||+||+++.++. +||+|||.++.
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 999999999999999987655445889999999999999999999999999999999999997765 99999999987
Q ss_pred cCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH-------HH--------
Q 002321 840 LPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF-------SV-------- 904 (936)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~-------~~-------- 904 (936)
..... ......+++.|+|||.+ .+..++.++||||+||++|||++|+.||......... ..
T Consensus 174 ~~~~~---~~~~~~gt~~Y~APE~l-~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 174 LDQGE---LCTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp TTSCC---CCCCCCSCCTTCSSCSS-CCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred ccccc---ccccccCCcccCChHHh-ccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence 64322 23445789999999998 4557899999999999999999999999764221000 00
Q ss_pred -----HHH--------HHHhhhccccceeecccccccccccccC
Q 002321 905 -----TWL--------EEHWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 905 -----~~~--------~~~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
.+. .....+..+.+++.+||..||.+||+++
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~ 293 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDP 293 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCT
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHH
Confidence 000 0011235678899999999999999974
No 287
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.3e-35 Score=326.70 Aligned_cols=198 Identities=21% Similarity=0.234 Sum_probs=165.2
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-----------CCCcceeeeEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-----------HPNLVTLEGYYW 757 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 757 (936)
..|+..+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.++++++ |+||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 45778889999999999999975 68999999986432 23567889999999886 899999999998
Q ss_pred eCC----eeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCCCCEEEc------CC
Q 002321 758 TQS----LQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS-NIIHYNIKSSNVLID------GS 826 (936)
Q Consensus 758 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~ivH~Dlkp~NIll~------~~ 826 (936)
..+ ..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ ||+||||||+||+++ ..
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCc
Confidence 654 678999999 8999999986443 2389999999999999999999998 999999999999994 44
Q ss_pred CCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccc
Q 002321 827 GEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWK 897 (936)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~ 897 (936)
+.+||+|||+++..... .....+|+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 175 ~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp EEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHH-TCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred ceEEEcccccccccCCC-----CCCCCCCccccCcHHHh-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 48999999999865422 23456899999999984 4468999999999999999999999998654
No 288
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=329.50 Aligned_cols=238 Identities=22% Similarity=0.286 Sum_probs=180.1
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEEEEe
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 768 (936)
..|+..+.||+|+||+||.....+++.||||++...... .+.+|+++++++ +||||+++++++.+....++||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 346777899999999966555567999999999654332 356899999999 799999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCC-----CCeEEeeccCccccCCC
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGS-----GEPKVGDYGLARLLPML 843 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg~a~~~~~~ 843 (936)
++ |+|.+++...... ..+.++..++.|+++||+|||+++|+||||||+||+++.+ ..+||+|||+++.....
T Consensus 100 ~~-g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp CS-EEHHHHHHSSSCC--CCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred CC-CCHHHHHHhcCCC--ccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 95 6999999865432 4444567899999999999999999999999999999532 35889999999876432
Q ss_pred cc-ccccccccCcccccCcccccC--cccCCchhhHHHHHHHHHHHHc-CCCCCCccchhHHHHHHH-------HHHHhh
Q 002321 844 DR-YVLSSKIQSALGYMAPEFACR--TVKITDKCDVYGFGVLVLEVVT-GKRPLSTWKMMWWFSVTW-------LEEHWK 912 (936)
Q Consensus 844 ~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwSlG~~l~el~~-g~~Pf~~~~~~~~~~~~~-------~~~~~~ 912 (936)
.. ........||+.|+|||++.. ...++.++||||+||++|||++ |..||............. ..+...
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE 256 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHH
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccc
Confidence 21 122344678999999999853 3457889999999999999999 999996654332221100 001122
Q ss_pred hccccceeeccccccccccccc
Q 002321 913 KAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 913 ~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+..+++++.+||..||.+||++
T Consensus 257 ~~~~~~li~~~L~~dP~~Rps~ 278 (432)
T 3p23_A 257 DVIARELIEKMIAMDPQKRPSA 278 (432)
T ss_dssp HHHHHHHHHHHSCSSGGGSCCH
T ss_pred cHHHHHHHHHHHhCCHhhCCCH
Confidence 3446789999999999999986
No 289
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-34 Score=347.38 Aligned_cols=228 Identities=20% Similarity=0.245 Sum_probs=187.1
Q ss_pred ccccCCCcccccCceEEEEEEeC--CCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCcceeeeEEEeCCe-----e
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR--DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSL-----Q 762 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 762 (936)
..|+..+.||+|+||.||+|++. +|+.||||++...........+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 45788889999999999999986 5899999998765444456778999999999999999999999987655 6
Q ss_pred EEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCC
Q 002321 763 LLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPM 842 (936)
Q Consensus 763 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (936)
++||||+++++|.+++.. .+++.+++.++.|++.||+|||++||+||||||+||+++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999999987754 38999999999999999999999999999999999999975 999999999986543
Q ss_pred CccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHHHHHHHHHHhhhccccceeec
Q 002321 843 LDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWFSVTWLEEHWKKAEWRNVSMR 922 (936)
Q Consensus 843 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (936)
. ....||+.|+|||++.+. ++.++|||||||++|||++|..||.......... ..+....+..+.+++.+
T Consensus 234 ~------~~~~gt~~y~aPE~~~~~--~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~ 303 (681)
T 2pzi_A 234 F------GYLYGTPGFQAPEIVRTG--PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE--DDPVLKTYDSYGRLLRR 303 (681)
T ss_dssp C------SCCCCCTTTSCTTHHHHC--SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT--TCHHHHHCHHHHHHHHH
T ss_pred C------CccCCCccccCHHHHcCC--CCCceehhhhHHHHHHHHhCCCCCcccccccccc--cccccccCHHHHHHHhh
Confidence 2 345689999999988433 4889999999999999999999987643211110 01111234678899999
Q ss_pred ccccccccccc
Q 002321 923 SCKGSSRQRRR 933 (936)
Q Consensus 923 ~l~~~p~~Rp~ 933 (936)
||..||.+||+
T Consensus 304 ~l~~dP~~R~~ 314 (681)
T 2pzi_A 304 AIDPDPRQRFT 314 (681)
T ss_dssp HTCSSGGGSCS
T ss_pred hccCChhhCCC
Confidence 99999999996
No 290
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6.5e-33 Score=305.69 Aligned_cols=242 Identities=21% Similarity=0.299 Sum_probs=150.9
Q ss_pred cccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINL 180 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 180 (936)
+++.+++++++++ .+|..+. ++|++|+|++|+|+ .++...|..+++|++|+|++|+|++..|..|+.+++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 5777788877776 4565553 57777788777777 556666777777777777777777766777777777777777
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeeccccccc--ccCCcccccccCcceeeccccccC
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFS--GSIPDGIGSCSLLRTIDFSENSFS 258 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~ 258 (936)
++|+++. +|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..+..+..+ +|++|++++|+++
T Consensus 110 ~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 7777774 343333 67777777777777555556777777777777777775 3556666666 6777777777766
Q ss_pred CCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhh
Q 002321 259 GNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMA 338 (936)
Q Consensus 259 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 338 (936)
+ +|..+. ++|+.|++++|.+++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+.
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 4 333222 34555555555555554455555555555555555555444444555555555555555555 3444455
Q ss_pred ccCCCCEEEccCCcCc
Q 002321 339 NCMNLVALDFSQNSMN 354 (936)
Q Consensus 339 ~l~~L~~L~Ls~N~l~ 354 (936)
.+++|+.|++++|+++
T Consensus 262 ~l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNIT 277 (332)
T ss_dssp GCTTCCEEECCSSCCC
T ss_pred cCccCCEEECCCCCCC
Confidence 5555555555555544
No 291
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=4.1e-37 Score=356.03 Aligned_cols=111 Identities=20% Similarity=0.236 Sum_probs=57.4
Q ss_pred ccccEEeccCCcccCcCCCc-hhhcCCCcEEEccCccccccc---chhhhhcCCCCcEEEccCccCCCCCCCCcc-ccc-
Q 002321 100 QFLRKLSLSSNNLTGSISPN-LAKLQNLRVIDLSGNSLSGSI---PDEFFKQCGSLRVISLAKNRFSGKIPSSLS-LCS- 173 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~i---~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~-~l~- 173 (936)
+.|++|+|++|+++...... +..+++|++|+|++|++++.. -...|..+++|++|+|++|++++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45677777777776543333 666777777777777766321 123455566666666666666533222221 122
Q ss_pred ---cccccccccccccC----CCCCCCCCCCCCCEEecCCCCCC
Q 002321 174 ---TLATINLSSNRFSS----PLPLGIWGLSALRTLDLSDNLLE 210 (936)
Q Consensus 174 ---~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~ 210 (936)
+|++|+|++|+|+. .++..+..+++|++|+|++|.++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 126 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 126 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCc
Confidence 34444444444442 12334444444444444444443
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.3e-32 Score=301.09 Aligned_cols=220 Identities=24% Similarity=0.333 Sum_probs=122.9
Q ss_pred cccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINL 180 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 180 (936)
+++.++++++.++ .+|..+. ++|++|+|++|+|+ .++...|..+++|++|+|++|+|++..|..|+.+++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 5667777777776 3454443 56777777777776 455555666666666666666666666666666666666666
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccc--cCCcccccccCcceeeccccccC
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSG--SIPDGIGSCSLLRTIDFSENSFS 258 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~ 258 (936)
++|+++. +|..+. ++|++|++++|++++..+..+.++++|++|++++|.++. ..+..|..+++|++|++++|.++
T Consensus 108 s~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 6666663 333332 456666666666665555555556666666666665542 44445555555555555555554
Q ss_pred CCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhh
Q 002321 259 GNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMA 338 (936)
Q Consensus 259 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 338 (936)
. +|..+. ++|++|++++|++++..+..+.++++|+.|+|++|++++..+..+.
T Consensus 185 ~-------------------------l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 185 T-------------------------IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp S-------------------------CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred c-------------------------CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 2 122111 3455555555555544444455555555555555555544444444
Q ss_pred ccCCCCEEEccCCcCc
Q 002321 339 NCMNLVALDFSQNSMN 354 (936)
Q Consensus 339 ~l~~L~~L~Ls~N~l~ 354 (936)
.+++|+.|++++|++.
T Consensus 238 ~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 238 NTPHLRELHLNNNKLV 253 (330)
T ss_dssp GSTTCCEEECCSSCCS
T ss_pred CCCCCCEEECCCCcCc
Confidence 4555555555554443
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2e-32 Score=301.70 Aligned_cols=287 Identities=19% Similarity=0.244 Sum_probs=147.6
Q ss_pred CCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccC
Q 002321 199 LRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRK 278 (936)
Q Consensus 199 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 278 (936)
|+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 444444444444 3333332 3444455555544444444444444444444444444444344444444444444444
Q ss_pred ccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccc--cCChhhhccCCCCEEEccCCcCccC
Q 002321 279 NLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTG--SLPDSMANCMNLVALDFSQNSMNGD 356 (936)
Q Consensus 279 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~ 356 (936)
|.++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.++. ..+..+..+ +|
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L------------- 174 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KL------------- 174 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CC-------------
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-cc-------------
Confidence 4443 2222222 445555555555554444444555555555555555532 333333333 44
Q ss_pred CChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccc
Q 002321 357 LPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAI 436 (936)
Q Consensus 357 ~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 436 (936)
++|++++|++++ +|..+. ++|++|+|++|++++..+..+
T Consensus 175 --------------------------------------~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l 213 (332)
T 2ft3_A 175 --------------------------------------NYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDL 213 (332)
T ss_dssp --------------------------------------SCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSS
T ss_pred --------------------------------------CEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHh
Confidence 444444444432 222211 345555555555555555555
Q ss_pred cCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccc------
Q 002321 437 GDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAK------ 510 (936)
Q Consensus 437 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~------ 510 (936)
..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..
T Consensus 214 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 292 (332)
T 2ft3_A 214 LRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVK 292 (332)
T ss_dssp TTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSS
T ss_pred cCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccc
Confidence 55556666666666665544555566666666666666665 55666666666666666666666555555543
Q ss_pred cCCccEEEcCCCccc--CCCCcccccccccCeeecCCCc
Q 002321 511 LTNLQNVDLSFNSLT--GGLPKQLVNLVHLSSFNISHNH 547 (936)
Q Consensus 511 l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~ls~N~ 547 (936)
..+|+.|++++|++. +..|..+..+++|+.+++++|+
T Consensus 293 ~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 293 RAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 356778888888776 5566777778888888887774
No 294
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-34 Score=325.59 Aligned_cols=237 Identities=13% Similarity=0.089 Sum_probs=177.1
Q ss_pred cccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCC-CCccee---------eeE--
Q 002321 691 LLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRH-PNLVTL---------EGY-- 755 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h-~niv~l---------~~~-- 755 (936)
.+...+.||+|+||+||+|++. +|+.||||+++..... ...+.+.+|+.+++.++| ++.... .+.
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 3566778999999999999965 6899999998743322 225779999999999987 322111 111
Q ss_pred ----------EEe-----CCeeEEEEEecCCCChhhhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Q 002321 756 ----------YWT-----QSLQLLIYEFVSGGSLHKHLHEG----SGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNI 816 (936)
Q Consensus 756 ----------~~~-----~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dl 816 (936)
+.. ....+++|+++ +++|.+++... .....+++..++.++.|+++||+|||+++|+||||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi 237 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL 237 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence 111 12346677766 78999988521 12234788899999999999999999999999999
Q ss_pred CCCCEEEcCCCCeEEeeccCccccCCCccccccccccCcccccCccccc---------CcccCCchhhHHHHHHHHHHHH
Q 002321 817 KSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFAC---------RTVKITDKCDVYGFGVLVLEVV 887 (936)
Q Consensus 817 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---------~~~~~~~~~DvwSlG~~l~el~ 887 (936)
||+|||++.++.+||+|||+++..... .....| +.|+|||++. ....++.++|||||||++|||+
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999999865322 234456 8999999883 3445888999999999999999
Q ss_pred cCCCCCCccchhHHHHHHHHHHHhhhccccceeeccccccccccccc
Q 002321 888 TGKRPLSTWKMMWWFSVTWLEEHWKKAEWRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 888 ~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~f 934 (936)
+|+.||............+......++.+++++.+||..||.+||+.
T Consensus 312 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~ 358 (413)
T 3dzo_A 312 CADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLP 358 (413)
T ss_dssp HSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCH
Confidence 99999987654322211111112345778999999999999999984
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.2e-32 Score=297.63 Aligned_cols=295 Identities=19% Similarity=0.213 Sum_probs=158.6
Q ss_pred cccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecc
Q 002321 174 TLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFS 253 (936)
Q Consensus 174 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 253 (936)
+|+.++++++.++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 56666666666653 343332 455666666666665544455556666666666666655555555555555555555
Q ss_pred ccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccc--
Q 002321 254 ENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTG-- 331 (936)
Q Consensus 254 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-- 331 (936)
+|+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.++.
T Consensus 109 ~n~l~-------------------------~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 161 (330)
T 1xku_A 109 KNQLK-------------------------ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG 161 (330)
T ss_dssp SSCCS-------------------------BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG
T ss_pred CCcCC-------------------------ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC
Confidence 55554 2222221 456666666666665555556666666666666666642
Q ss_pred cCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhh
Q 002321 332 SLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPAT 411 (936)
Q Consensus 332 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 411 (936)
..+..+..+++|+.|++++|.+.. +|.. + .++|++|++++|++++..+..
T Consensus 162 ~~~~~~~~l~~L~~L~l~~n~l~~-l~~~---------------------------~--~~~L~~L~l~~n~l~~~~~~~ 211 (330)
T 1xku_A 162 IENGAFQGMKKLSYIRIADTNITT-IPQG---------------------------L--PPSLTELHLDGNKITKVDAAS 211 (330)
T ss_dssp BCTTGGGGCTTCCEEECCSSCCCS-CCSS---------------------------C--CTTCSEEECTTSCCCEECTGG
T ss_pred cChhhccCCCCcCEEECCCCcccc-CCcc---------------------------c--cccCCEEECCCCcCCccCHHH
Confidence 455566666666666666666641 2110 0 145666666666665555555
Q ss_pred hcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccc
Q 002321 412 IGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLV 491 (936)
Q Consensus 412 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 491 (936)
+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|....
T Consensus 212 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~--- 287 (330)
T 1xku_A 212 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG--- 287 (330)
T ss_dssp GTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS---
T ss_pred hcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc---
Confidence 555555555555555555444445555555555555555554 3444444455555555555555433333332110
Q ss_pred cccccCccccCCCcccccccCCccEEEcCCCcccC--CCCcccccccccCeeecCCCc
Q 002321 492 SLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTG--GLPKQLVNLVHLSSFNISHNH 547 (936)
Q Consensus 492 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~ls~N~ 547 (936)
.....+.|+.|++++|++.. ..|..+..+.+|+.++|++|+
T Consensus 288 ---------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 288 ---------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp ---------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ---------------cccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 00113566667777776642 345666667777777777664
No 296
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=2.4e-36 Score=349.53 Aligned_cols=393 Identities=17% Similarity=0.132 Sum_probs=248.0
Q ss_pred CceEEeccCCCCCCcccccc-cccCccccEEeccCCcccCc----CCCchhhcCCCcEEEccCcccccccchhhhhcCC-
Q 002321 76 NRVIELTLNGLSLTGRIGRG-LLQLQFLRKLSLSSNNLTGS----ISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCG- 149 (936)
Q Consensus 76 ~~v~~l~l~~~~l~g~~~~~-l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~- 149 (936)
.+++.|+|++++++...... +..+++|++|+|++|++++. ++..+..+++|++|||++|++++..+..++..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46889999999987654444 78899999999999999853 4677888899999999999998666667777777
Q ss_pred ---CCcEEEccCccCCC----CCCCCccccccccccccccccccCCCCCCCC-----CCCCCCEEecCCCCCCCCC----
Q 002321 150 ---SLRVISLAKNRFSG----KIPSSLSLCSTLATINLSSNRFSSPLPLGIW-----GLSALRTLDLSDNLLEGEI---- 213 (936)
Q Consensus 150 ---~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~---- 213 (936)
+|++|+|++|+|+. .++..+..+++|++|+|++|++++..+..+. ..++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 79999999999984 4588889999999999999999865444332 3567999999999888643
Q ss_pred ccCccCCCCcceeecccccccccCCccccc-----ccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcc
Q 002321 214 PKGVESLKNLRVINLSKNMFSGSIPDGIGS-----CSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKW 288 (936)
Q Consensus 214 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 288 (936)
+..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|.+++.... .++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR--------------------DLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH--------------------HHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH--------------------HHHHH
Confidence 445566778888888888776544333332 44666666666666543100 12334
Q ss_pred cccCCccceecccCceecccc-----CcccccccccceEEccCCccccc----CChhhhccCCCCEEEccCCcCccCCCh
Q 002321 289 IGELESLETLDLSGNKFSGAV-----PISIGNLQRLKVLNFSANRLTGS----LPDSMANCMNLVALDFSQNSMNGDLPQ 359 (936)
Q Consensus 289 ~~~l~~L~~L~L~~N~l~~~~-----~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 359 (936)
+..+++|++|++++|++++.. +..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+.+..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 445555666666666555322 12223466777777777777753 456666677777777777776533222
Q ss_pred hhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCC----ChhhhcccccCCeeeccCccccCCCCcc
Q 002321 360 WIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGE----TPATIGALSGLQLLNLSRNSLVGPIPVA 435 (936)
Q Consensus 360 ~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 435 (936)
.+... + ....++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..
T Consensus 303 ~l~~~-------------------l---~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 360 (461)
T 1z7x_W 303 LLCET-------------------L---LEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRE 360 (461)
T ss_dssp HHHHH-------------------H---TSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHH
T ss_pred HHHHH-------------------h---ccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHH
Confidence 11100 0 01124677777777777654 3444455566666666666665432222
Q ss_pred ccCcccCCeeecCCccccccCCCCCC-CcCCCcEEEecCCccCC----cCccccccccccccccccCccccCCCccccc-
Q 002321 436 IGDLKALNVLDLSENWLNGSIPPEIG-GAYSLKELRLERNFLAG----KIPTSIENCSSLVSLILSKNNLTGPIPIAIA- 509 (936)
Q Consensus 436 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~- 509 (936)
+.. .+. ..++|+.|+|++|.+++ .+|..+..+++|++|+|++|++++.....+.
T Consensus 361 l~~--------------------~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~ 420 (461)
T 1z7x_W 361 LCQ--------------------GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVE 420 (461)
T ss_dssp HHH--------------------HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHH
T ss_pred HHH--------------------HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHH
Confidence 221 000 13345555555555543 4555555556666666666655532211111
Q ss_pred ----ccCCccEEEcCCCcccCCCCc
Q 002321 510 ----KLTNLQNVDLSFNSLTGGLPK 530 (936)
Q Consensus 510 ----~l~~L~~L~Ls~N~l~~~~p~ 530 (936)
...+|+.|++.+|.+....+.
T Consensus 421 ~l~~~~~~L~~L~~~~~~~~~~~~~ 445 (461)
T 1z7x_W 421 SVRQPGCLLEQLVLYDIYWSEEMED 445 (461)
T ss_dssp HHTSTTCCCCEEECTTCCCCHHHHH
T ss_pred HhccCCcchhheeecccccCHHHHH
Confidence 123466666666665543333
No 297
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.2e-33 Score=301.73 Aligned_cols=209 Identities=15% Similarity=0.111 Sum_probs=172.6
Q ss_pred ccccCCCcccccCceEEEEEEeC-CCcEEEEEEeeccCcc--chHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLV--KSQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..|+..+.||+|+||.||+|++. +++.||||++...... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 34677789999999999999986 4899999999765432 23477899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++++|.++++.. ....++.+++.|++.||+|||++||+||||||+||+++.+|.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 999999999998642 3556788999999999999999999999999999999999999998543
Q ss_pred cccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhH--------HHH-HH--HHHHHhhhcc
Q 002321 847 VLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMW--------WFS-VT--WLEEHWKKAE 915 (936)
Q Consensus 847 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~--------~~~-~~--~~~~~~~~~~ 915 (936)
|++| ++.++||||+||++|||++|+.||...+... ... .. .......++.
T Consensus 175 -----------~~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 175 -----------TMPD--------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp -----------CCTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHH
T ss_pred -----------ccCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHH
Confidence 3333 5789999999999999999999998754311 000 00 0111234567
Q ss_pred ccceeeccccccccccccc
Q 002321 916 WRNVSMRSCKGSSRQRRRF 934 (936)
Q Consensus 916 ~~~~~~~~l~~~p~~Rp~f 934 (936)
+.+++.+||..||.+| +.
T Consensus 236 l~~li~~~l~~dP~~R-s~ 253 (286)
T 3uqc_A 236 ISAVAARSVQGDGGIR-SA 253 (286)
T ss_dssp HHHHHHHHHCTTSSCC-CH
T ss_pred HHHHHHHHcccCCccC-CH
Confidence 8999999999999999 64
No 298
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1e-32 Score=299.44 Aligned_cols=212 Identities=21% Similarity=0.282 Sum_probs=171.5
Q ss_pred ccCC-CcccccCceEEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHH-HcCCCCCcceeeeEEEe----CCeeEE
Q 002321 692 LNKD-CELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKL-GKVRHPNLVTLEGYYWT----QSLQLL 764 (936)
Q Consensus 692 ~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~l 764 (936)
|... +.||+|+||.||+|... +++.||||+++. ...+.+|+.++ +..+||||+++++++.. ....++
T Consensus 19 y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred hhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 3443 67999999999999975 689999999853 24577888888 55699999999999987 667899
Q ss_pred EEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcC---CCCeEEeeccCccccC
Q 002321 765 IYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDG---SGEPKVGDYGLARLLP 841 (936)
Q Consensus 765 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~a~~~~ 841 (936)
||||+++|+|.+++..... ..+++.++..++.|++.||+|||++||+||||||+||+++. ++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp EECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred EEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 9999999999999987542 34899999999999999999999999999999999999998 7899999999986431
Q ss_pred CCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCccchhHHH------------HHHHHHH
Q 002321 842 MLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLSTWKMMWWF------------SVTWLEE 909 (936)
Q Consensus 842 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~~~~~~~~------------~~~~~~~ 909 (936)
...++.++||||+||++|||++|+.||......... .......
T Consensus 172 -------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (299)
T 3m2w_A 172 -------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226 (299)
T ss_dssp -------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHH
T ss_pred -------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhc
Confidence 124678999999999999999999999765432110 0001111
Q ss_pred HhhhccccceeecccccccccccccC
Q 002321 910 HWKKAEWRNVSMRSCKGSSRQRRRFQ 935 (936)
Q Consensus 910 ~~~~~~~~~~~~~~l~~~p~~Rp~f~ 935 (936)
...++.+.+++.+||..||.+||+++
T Consensus 227 ~~~~~~~~~li~~~l~~dP~~Rps~~ 252 (299)
T 3m2w_A 227 SEVSEEVKMLIRNLLKTEPTQRMTIT 252 (299)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred ccCCHHHHHHHHHHcccChhhCCCHH
Confidence 33567889999999999999999863
No 299
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=1.7e-33 Score=311.00 Aligned_cols=226 Identities=19% Similarity=0.200 Sum_probs=175.9
Q ss_pred cccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCc-------cchHHHHHHHHHHHHcCC---------CCCccee
Q 002321 689 HALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSL-------VKSQEDFEREVKKLGKVR---------HPNLVTL 752 (936)
Q Consensus 689 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------h~niv~l 752 (936)
...|+..+.||+|+||+||+|++ +|+.||||+++.... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 34578889999999999999998 589999999976532 223477899999998886 6666666
Q ss_pred eeEE-----------------Ee-------------CCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHH
Q 002321 753 EGYY-----------------WT-------------QSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKS 802 (936)
Q Consensus 753 ~~~~-----------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~a 802 (936)
.+++ .+ ....++||||+++|++.+.+.+ ..+++.++..++.|++.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 6654 22 6788999999999977766644 238999999999999999
Q ss_pred HHHHH-hCCcccCCCCCCCEEEcCCC--------------------CeEEeeccCccccCCCccccccccccCcccccCc
Q 002321 803 LAHLH-QSNIIHYNIKSSNVLIDGSG--------------------EPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAP 861 (936)
Q Consensus 803 l~~LH-~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP 861 (936)
|+||| +++|+||||||+|||++.++ .+||+|||+|+.... ....||+.|+||
T Consensus 174 L~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aP 246 (336)
T 2vuw_A 174 LAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDE 246 (336)
T ss_dssp HHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCS
T ss_pred HHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccCh
Confidence 99999 99999999999999999887 899999999986542 234689999999
Q ss_pred ccccCcccCCchhhHHHHHHH-HHHHHcCCCCCCccchhHHHHHHH------------HHHHhhhccccceeeccccccc
Q 002321 862 EFACRTVKITDKCDVYGFGVL-VLEVVTGKRPLSTWKMMWWFSVTW------------LEEHWKKAEWRNVSMRSCKGSS 928 (936)
Q Consensus 862 E~~~~~~~~~~~~DvwSlG~~-l~el~~g~~Pf~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~p 928 (936)
|++.+. . +.++||||++++ .+++++|..||............. ..+...++++.+++.+||..|.
T Consensus 247 E~~~g~-~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~ds 324 (336)
T 2vuw_A 247 DLFTGD-G-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFSS 324 (336)
T ss_dssp GGGCCC-S-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSSS
T ss_pred hhhcCC-C-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccCC
Confidence 999544 3 889999998777 888999999996531100000000 1122345678999999999874
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=5.6e-32 Score=300.91 Aligned_cols=283 Identities=19% Similarity=0.222 Sum_probs=236.5
Q ss_pred CCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccc
Q 002321 62 TPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIP 141 (936)
Q Consensus 62 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~ 141 (936)
++|.|.|+ |+- ++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+++ .++
T Consensus 28 ~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~ 92 (353)
T 2z80_A 28 LSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIE 92 (353)
T ss_dssp CEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC-EEC
T ss_pred CCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC-ccC
Confidence 37999998 764 334444 4565554 48999999999999877778999999999999999998 577
Q ss_pred hhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCC-CCCCCCCCCCEEecCCC-CCCCCCccCccC
Q 002321 142 DEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLP-LGIWGLSALRTLDLSDN-LLEGEIPKGVES 219 (936)
Q Consensus 142 ~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~ 219 (936)
...|.++++|++|+|++|+|++..+..|+.+++|++|+|++|++++..+ ..+.++++|++|++++| .+++..+..+.+
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 172 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccC
Confidence 7788999999999999999997666668999999999999999997555 57899999999999999 577666788999
Q ss_pred CCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccc---cCCccc
Q 002321 220 LKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIG---ELESLE 296 (936)
Q Consensus 220 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~ 296 (936)
+++|++|++++|++++..|..|..+++|++|++++|+++...+..+..+++|+.|++++|.+++..+..+. ....++
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~ 252 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCC
T ss_pred CCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhh
Confidence 99999999999999988899999999999999999999755445566789999999999999977655443 356678
Q ss_pred eecccCceecc----ccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCCh
Q 002321 297 TLDLSGNKFSG----AVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQ 359 (936)
Q Consensus 297 ~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 359 (936)
.++|+++.+++ .+|..+.++++|+.|+|++|+++...+..|..+++|+.|++++|++.+..|.
T Consensus 253 ~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp EEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 88888888775 4677788999999999999999954444568999999999999999987764
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=4.1e-34 Score=341.85 Aligned_cols=451 Identities=14% Similarity=0.086 Sum_probs=295.0
Q ss_pred CccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcc---cCcCCCchh------------hcCCCc
Q 002321 63 PCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNL---TGSISPNLA------------KLQNLR 127 (936)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l---~~~~~~~l~------------~l~~L~ 127 (936)
|+.|.++.+.. .+... +.+ ......+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~--~~~l~--~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--REHVT--MAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--CCEEE--ESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--ccEEE--Eee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 45899985432 22222 222 22233344567889999999987532 133443332 788999
Q ss_pred EEEccCcccccccchhhhhcCCC-CcEEEccCcc-CCC-CCCCCccccccccccccccccccCCC----CCCCCCCCCCC
Q 002321 128 VIDLSGNSLSGSIPDEFFKQCGS-LRVISLAKNR-FSG-KIPSSLSLCSTLATINLSSNRFSSPL----PLGIWGLSALR 200 (936)
Q Consensus 128 ~L~Ls~N~l~~~i~~~~f~~l~~-L~~L~L~~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~ 200 (936)
+|+|++|.+++..+..+...+++ |++|+|++|. ++. .++.....+++|++|+|++|.+++.. +..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999998886544443333444 9999999886 221 11222346789999999999887652 23445788999
Q ss_pred EEecCCCCCCC----CCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccC---CCCchhhhccccccE
Q 002321 201 TLDLSDNLLEG----EIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFS---GNLPETMQKLSLCNF 273 (936)
Q Consensus 201 ~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~---~~~~~~l~~l~~L~~ 273 (936)
+|+|++|.+++ .++..+.++++|++|+|++|.+.+ ++..+..+++|++|+++.+... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 99999998873 334445678899999999998885 5677888899999998864332 233455667778888
Q ss_pred EeccCccccCCCCcccccCCccceecccCceeccccC-cccccccccceEEccCCcccccCChhhhccCCCCEEEccC--
Q 002321 274 MNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVP-ISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQ-- 350 (936)
Q Consensus 274 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-- 350 (936)
|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++++-..+.++..+..+++|+.|++++
T Consensus 275 L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~ 353 (592)
T 3ogk_B 275 LGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGA 353 (592)
T ss_dssp EEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCC
T ss_pred cCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCc
Confidence 8887753 34567777788888888888888765443 2356788888888883333333444556778888888883
Q ss_pred ---------CcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcc-cccCCe
Q 002321 351 ---------NSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGA-LSGLQL 420 (936)
Q Consensus 351 ---------N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~ 420 (936)
|.+++..... ....+++|++|+++.|++++..+..+.. +++|+.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~--------------------------l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~ 407 (592)
T 3ogk_B 354 DEQGMEDEEGLVSQRGLIA--------------------------LAQGCQELEYMAVYVSDITNESLESIGTYLKNLCD 407 (592)
T ss_dssp CSSTTSSTTCCCCHHHHHH--------------------------HHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCE
T ss_pred cccccccccCccCHHHHHH--------------------------HHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcE
Confidence 4443211000 0123567888888888887766666665 788888
Q ss_pred eecc----CccccCC-----CCccccCcccCCeeecCCcc--ccccCCCCCC-CcCCCcEEEecCCccCC-cCccccccc
Q 002321 421 LNLS----RNSLVGP-----IPVAIGDLKALNVLDLSENW--LNGSIPPEIG-GAYSLKELRLERNFLAG-KIPTSIENC 487 (936)
Q Consensus 421 L~L~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~l~~l 487 (936)
|+|+ .|.+++. ++..+..+++|++|+|+.|. +++..+..+. .+++|+.|+|++|.+++ .++..+.++
T Consensus 408 L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 487 (592)
T 3ogk_B 408 FRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGC 487 (592)
T ss_dssp EEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCC
T ss_pred EEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcC
Confidence 8885 6677653 23336667888888887433 5543333332 36778888888888775 345556777
Q ss_pred cccccccccCccccCC-CcccccccCCccEEEcCCCcccCCCCccc-ccccccCeeecCCC
Q 002321 488 SSLVSLILSKNNLTGP-IPIAIAKLTNLQNVDLSFNSLTGGLPKQL-VNLVHLSSFNISHN 546 (936)
Q Consensus 488 ~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~ls~N 546 (936)
++|++|+|++|++++. ++..+..+++|++|+|++|++++.-...+ ..++.+....+..+
T Consensus 488 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 488 PNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp TTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred cccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 8888888888887644 33444567888888888888775432222 24555555555544
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.2e-31 Score=289.92 Aligned_cols=254 Identities=21% Similarity=0.235 Sum_probs=200.3
Q ss_pred CCCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccc-
Q 002321 61 DTPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGS- 139 (936)
Q Consensus 61 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~- 139 (936)
.|.|.|.+|.|+.. .++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++..
T Consensus 4 ~C~C~~~~l~c~~~--~l~-----------~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 4 RCSCSGTEIRCNSK--GLT-----------SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TCEEETTEEECCSS--CCS-----------SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCeeCCCEEEcCCC--Ccc-----------cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 34689999999753 222 3344332 6899999999999966556689999999999999999732
Q ss_pred -cchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCC-CCCCCCCCCCEEecCCCCCCCCCccCc
Q 002321 140 -IPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLP-LGIWGLSALRTLDLSDNLLEGEIPKGV 217 (936)
Q Consensus 140 -i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~ 217 (936)
++ ..+..+++|++|+|++|.+++ +|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..+..+
T Consensus 69 ~~~-~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 146 (306)
T 2z66_A 69 CCS-QSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146 (306)
T ss_dssp EEE-HHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTT
T ss_pred Ccc-cccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhc
Confidence 23 345678999999999999984 66678889999999999999988665 678889999999999999988888888
Q ss_pred cCCCCcceeecccccccc-cCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccc
Q 002321 218 ESLKNLRVINLSKNMFSG-SIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLE 296 (936)
Q Consensus 218 ~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 296 (936)
.++++|++|+|++|.+++ ..|..+..+++|++|+|++|++++..|..+..+++|+.|+|++|.+++..+..+..+++|+
T Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 226 (306)
T 2z66_A 147 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226 (306)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCC
T ss_pred ccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCC
Confidence 889999999999999886 5788888888899999888888877777777777777777777777766666677777777
Q ss_pred eecccCceeccccCccccccc-ccceEEccCCcccc
Q 002321 297 TLDLSGNKFSGAVPISIGNLQ-RLKVLNFSANRLTG 331 (936)
Q Consensus 297 ~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~ 331 (936)
+|+|++|++++..|..+..++ +|+.|+|++|.+++
T Consensus 227 ~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 227 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp EEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred EeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 777777777766666666663 67777777777664
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.5e-30 Score=287.57 Aligned_cols=260 Identities=18% Similarity=0.219 Sum_probs=118.4
Q ss_pred CCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecc
Q 002321 150 SLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLS 229 (936)
Q Consensus 150 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 229 (936)
+|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.++++|++|+|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 34444444444443333344444444444444444444444445555555555555555553333334555555555555
Q ss_pred cccccccCC-cccccccCcceeeccccc-cCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceecc
Q 002321 230 KNMFSGSIP-DGIGSCSLLRTIDFSENS-FSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSG 307 (936)
Q Consensus 230 ~N~l~~~~p-~~l~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 307 (936)
+|++++..+ ..|..+++|++|++++|. +++..+..| ..+++|++|++++|++++
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~------------------------~~l~~L~~L~l~~n~l~~ 188 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDF------------------------AGLTFLEELEIDASDLQS 188 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTT------------------------TTCCEEEEEEEEETTCCE
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHc------------------------cCCCCCCEEECCCCCcCc
Confidence 555553222 244555555555555552 332222233 333334444444444443
Q ss_pred ccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCC
Q 002321 308 AVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASS 387 (936)
Q Consensus 308 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~ 387 (936)
..|..+.++++|++|++++|+++......+..+++|+.|++++|.+++..+..+. .
T Consensus 189 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~------------------------~ 244 (353)
T 2z80_A 189 YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS------------------------T 244 (353)
T ss_dssp ECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC----------------------------
T ss_pred cCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc------------------------c
Confidence 3344444444444444444444322222233344455555555544422111000 0
Q ss_pred CCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCC-CCCcCCC
Q 002321 388 GSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPE-IGGAYSL 466 (936)
Q Consensus 388 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L 466 (936)
......++.++|++|.+++ |.+. .+|..+..+++|++|+|++|+++. +|.. +..+++|
T Consensus 245 ~~~~~~l~~l~L~~~~l~~-------------------~~l~-~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L 303 (353)
T 2z80_A 245 GETNSLIKKFTFRNVKITD-------------------ESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSL 303 (353)
T ss_dssp --CCCCCCEEEEESCBCCH-------------------HHHH-HHHHHHHTCTTCCEEECCSSCCCC-CCTTTTTTCTTC
T ss_pred ccccchhhccccccccccC-------------------cchh-hhHHHHhcccCCCEEECCCCCCCc-cCHHHHhcCCCC
Confidence 0112345555555555432 2221 234455555666666666666653 4433 4666677
Q ss_pred cEEEecCCccCC
Q 002321 467 KELRLERNFLAG 478 (936)
Q Consensus 467 ~~L~Ls~N~l~~ 478 (936)
++|+|++|.+++
T Consensus 304 ~~L~L~~N~~~~ 315 (353)
T 2z80_A 304 QKIWLHTNPWDC 315 (353)
T ss_dssp CEEECCSSCBCC
T ss_pred CEEEeeCCCccC
Confidence 777777776664
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=288.59 Aligned_cols=239 Identities=24% Similarity=0.263 Sum_probs=179.2
Q ss_pred ccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcc
Q 002321 91 RIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLS 170 (936)
Q Consensus 91 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~ 170 (936)
.+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|+|+ .++...|.++++|++|+|++|+|++..+..|.
T Consensus 57 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 133 (440)
T 3zyj_A 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIEIGAFNGLANLNTLELFDNRLTTIPNGAFV 133 (440)
T ss_dssp SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EECGGGGTTCSSCCEEECCSSCCSSCCTTTSC
T ss_pred cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccChhhccCCccCCEEECCCCcCCeeCHhHhh
Confidence 4555544 67899999999999888889999999999999999998 67778888899999999999988877777788
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCCEEecCCC-CCCCCCccCccCCCCcceeecccccccccCCcccccccCcce
Q 002321 171 LCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDN-LLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRT 249 (936)
Q Consensus 171 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 249 (936)
.+++|++|+|++|+|+.+.+..|.++++|++|+|++| .+....+..|.++++|++|+|++|+++ .+| .+..+++|++
T Consensus 134 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~ 211 (440)
T 3zyj_A 134 YLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDE 211 (440)
T ss_dssp SCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCE
T ss_pred ccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCE
Confidence 8888888888888888777777888888888888874 444333345677777777777777776 333 2555555555
Q ss_pred eeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcc
Q 002321 250 IDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRL 329 (936)
Q Consensus 250 L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 329 (936)
|+|++|+++ +..|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++
T Consensus 212 L~Ls~N~l~------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 267 (440)
T 3zyj_A 212 LDLSGNHLS------------------------AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 267 (440)
T ss_dssp EECTTSCCC------------------------EECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCC
T ss_pred EECCCCccC------------------------ccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCC
Confidence 555555554 44455566666677777777777766677777777778888888877
Q ss_pred cccCChhhhccCCCCEEEccCCcCccCCC
Q 002321 330 TGSLPDSMANCMNLVALDFSQNSMNGDLP 358 (936)
Q Consensus 330 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 358 (936)
++..+..|..+++|+.|+|++|++.++-.
T Consensus 268 ~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 268 TLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CccChhHhccccCCCEEEcCCCCccCCCC
Confidence 77777777778888888888888875543
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=4.5e-32 Score=324.17 Aligned_cols=420 Identities=13% Similarity=0.062 Sum_probs=313.6
Q ss_pred CceEEeccCCCCC---Ccccccccc------------cCccccEEeccCCcccCcCCCchhhc--CCCcEEEccCcc-cc
Q 002321 76 NRVIELTLNGLSL---TGRIGRGLL------------QLQFLRKLSLSSNNLTGSISPNLAKL--QNLRVIDLSGNS-LS 137 (936)
Q Consensus 76 ~~v~~l~l~~~~l---~g~~~~~l~------------~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~Ls~N~-l~ 137 (936)
.++.+|+|+++.. .|.+|..++ .+++|++|+|++|.+++..+..+..+ .+|++|+|++|. ++
T Consensus 73 ~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~ 152 (592)
T 3ogk_B 73 PNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT 152 (592)
T ss_dssp TTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE
T ss_pred CCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC
Confidence 4588888877432 133333322 78999999999999988777778774 459999999987 33
Q ss_pred cccchhhhhcCCCCcEEEccCccCCCC----CCCCccccccccccccccccccCC----CCCCCCCCCCCCEEecCCCCC
Q 002321 138 GSIPDEFFKQCGSLRVISLAKNRFSGK----IPSSLSLCSTLATINLSSNRFSSP----LPLGIWGLSALRTLDLSDNLL 209 (936)
Q Consensus 138 ~~i~~~~f~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l 209 (936)
..--..+...+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+
T Consensus 153 ~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~ 232 (592)
T 3ogk_B 153 TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEI 232 (592)
T ss_dssp HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBG
T ss_pred HHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccH
Confidence 222223446899999999999998765 333456789999999999999843 334456789999999999999
Q ss_pred CCCCccCccCCCCcceeeccccccc---ccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCC
Q 002321 210 EGEIPKGVESLKNLRVINLSKNMFS---GSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVP 286 (936)
Q Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 286 (936)
.+ ++..+.++++|++|+++.+... +..+..+..+++|+.|+++++. .+.+|..+..+++|+.|+|++|.+++...
T Consensus 233 ~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~ 310 (592)
T 3ogk_B 233 LE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDH 310 (592)
T ss_dssp GG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHH
T ss_pred HH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHH
Confidence 85 7788999999999999864333 2344667889999999999864 34678888899999999999999765443
Q ss_pred -cccccCCccceecccCceeccccCcccccccccceEEcc-----------CCcccccC-ChhhhccCCCCEEEccCCcC
Q 002321 287 -KWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFS-----------ANRLTGSL-PDSMANCMNLVALDFSQNSM 353 (936)
Q Consensus 287 -~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~-----------~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l 353 (936)
..+..+++|++|+++++...+.++.....+++|++|+++ .|.+++.. +..+..+++|+.|+++.|.+
T Consensus 311 ~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l 390 (592)
T 3ogk_B 311 CTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDI 390 (592)
T ss_dssp HHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCC
T ss_pred HHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCc
Confidence 346789999999999443333344444678999999999 46777543 33456689999999999988
Q ss_pred ccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEecc----CcccCCC-----ChhhhcccccCCeeecc
Q 002321 354 NGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLS----HNEFSGE-----TPATIGALSGLQLLNLS 424 (936)
Q Consensus 354 ~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~L~L~ 424 (936)
++..+..+. ..+++|+.|+++ .|.+++. ++..+.++++|++|+|+
T Consensus 391 ~~~~~~~l~--------------------------~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~ 444 (592)
T 3ogk_B 391 TNESLESIG--------------------------TYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFY 444 (592)
T ss_dssp CHHHHHHHH--------------------------HHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred cHHHHHHHH--------------------------hhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEe
Confidence 754433221 125689999996 7788764 44457778999999998
Q ss_pred Ccc--ccCCCCcccc-CcccCCeeecCCccccc-cCCCCCCCcCCCcEEEecCCccCCc-CccccccccccccccccCcc
Q 002321 425 RNS--LVGPIPVAIG-DLKALNVLDLSENWLNG-SIPPEIGGAYSLKELRLERNFLAGK-IPTSIENCSSLVSLILSKNN 499 (936)
Q Consensus 425 ~N~--l~~~~~~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L~~N~ 499 (936)
+|. +++..+..+. .+++|++|+|++|++++ .++..+.++++|+.|+|++|.+++. ++..+..+++|++|+|++|+
T Consensus 445 ~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 445 LRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp CCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred cCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 544 6544444443 47899999999999986 3455567889999999999998754 45556789999999999999
Q ss_pred ccCCCcccc-cccCCccEEEcCCCc
Q 002321 500 LTGPIPIAI-AKLTNLQNVDLSFNS 523 (936)
Q Consensus 500 l~~~~p~~~-~~l~~L~~L~Ls~N~ 523 (936)
+++.....+ ..++.|....+..++
T Consensus 525 it~~~~~~l~~~~p~l~~~~~~~~~ 549 (592)
T 3ogk_B 525 ASMTGQDLMQMARPYWNIELIPSRR 549 (592)
T ss_dssp CCTTCTTGGGGCCTTEEEEEECCC-
T ss_pred CCHHHHHHHHHhCCCcEEEEecCcc
Confidence 987644444 357777777666653
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.6e-31 Score=289.80 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=148.4
Q ss_pred cCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccc-cccchhhh------hcCCCCcEEEccCccCCCCCCCCc-
Q 002321 98 QLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLS-GSIPDEFF------KQCGSLRVISLAKNRFSGKIPSSL- 169 (936)
Q Consensus 98 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~-~~i~~~~f------~~l~~L~~L~L~~N~l~~~~p~~~- 169 (936)
..++|++|++++|++ .+|..+... |+.|+|++|+++ +.+|...+ .++++|++|+|++|+|++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 344555555666655 445544443 555566666552 23443322 145566666666666665555554
Q ss_pred -cccccccccccccccccCCCCCCCCCC-----CCCCEEecCCCCCCCCCccCccCCCCcceeeccccccccc--CCccc
Q 002321 170 -SLCSTLATINLSSNRFSSPLPLGIWGL-----SALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGS--IPDGI 241 (936)
Q Consensus 170 -~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~l 241 (936)
+.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|.++++|++|+|++|++.+. .+..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 5566666666666666654 5555544 5666666666666655556666666666666666665543 12222
Q ss_pred --ccccCcceeeccccccCCC--C-chhhhccccccEEeccCccccCCCC-cccccCCccceecccCceeccccCccccc
Q 002321 242 --GSCSLLRTIDFSENSFSGN--L-PETMQKLSLCNFMNLRKNLFSGEVP-KWIGELESLETLDLSGNKFSGAVPISIGN 315 (936)
Q Consensus 242 --~~l~~L~~L~Ls~N~l~~~--~-~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 315 (936)
..+++|++|+|++|++++. + ...+..+++|+.|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 5666666666666666521 1 1233455667777777777766554 34555677777777777777 5565554
Q ss_pred ccccceEEccCCcccccCChhhhccCCCCEEEccCCcCcc
Q 002321 316 LQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNG 355 (936)
Q Consensus 316 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 355 (936)
++|++|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6777777777777754 44 7777777777777777763
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.9e-29 Score=288.73 Aligned_cols=232 Identities=25% Similarity=0.241 Sum_probs=155.3
Q ss_pred ccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccc
Q 002321 100 QFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATIN 179 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 179 (936)
++|++|+|++|+|++..+..|.++++|++|+|++|+|+ .++...|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 56777777777777777777777777777777777777 45556667777777777777777665555666666666666
Q ss_pred cccccccCCCCCCCCCCCCCCEEecCC-CCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccC
Q 002321 180 LSSNRFSSPLPLGIWGLSALRTLDLSD-NLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFS 258 (936)
Q Consensus 180 L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 258 (936)
|++|+|+.+.+..|.++++|++|+|++ |.+....+..|.++++|++|+|++|++++. | .+..
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~--------------- 216 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTP--------------- 216 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTT---------------
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccc---------------
Confidence 666666665555666666666666666 333322233455555555555555555532 2 2344
Q ss_pred CCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhh
Q 002321 259 GNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMA 338 (936)
Q Consensus 259 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 338 (936)
+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|.
T Consensus 217 ---------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 217 ---------LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp ---------CTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred ---------cccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 44555555555555555566666777777777777777777777777788888888888888877777778
Q ss_pred ccCCCCEEEccCCcCccCCC
Q 002321 339 NCMNLVALDFSQNSMNGDLP 358 (936)
Q Consensus 339 ~l~~L~~L~Ls~N~l~~~~p 358 (936)
.+++|+.|+|++|++.++..
T Consensus 288 ~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 288 PLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TCTTCCEEECCSSCEECSTT
T ss_pred cccCCCEEEccCCCcCCCCC
Confidence 88888888888888876543
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.5e-29 Score=270.63 Aligned_cols=255 Identities=20% Similarity=0.212 Sum_probs=195.5
Q ss_pred EEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccC
Q 002321 79 IELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAK 158 (936)
Q Consensus 79 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~ 158 (936)
+.++.++++++ .+|..+ .++|++|+|++|+|++..+..|.++++|++|+|++|+++ .++...|..+++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccc-eeCHhhcCCccCCCEEeCCC
Confidence 44555555665 345433 468899999999998877788899999999999999988 56666788889999999999
Q ss_pred cc-CCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccC
Q 002321 159 NR-FSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSI 237 (936)
Q Consensus 159 N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (936)
|+ ++...|..|..+++|++|+|++|++++..|..+.++++|++|+|++|++++..+..|.++++|++|+|++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 87 77777888888888899999888888887888888888888888888888776677888888888888888888766
Q ss_pred CcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCccccccc
Q 002321 238 PDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQ 317 (936)
Q Consensus 238 p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 317 (936)
+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|.+++..+..+..+++|++|+|++|.+....+.. .-..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 667888888888888888888777778888888888888888887766666777777888888888776433321 1223
Q ss_pred ccceEEccCCcccccCChhhh
Q 002321 318 RLKVLNFSANRLTGSLPDSMA 338 (936)
Q Consensus 318 ~L~~L~L~~N~l~~~~~~~~~ 338 (936)
.++.+....+.+....|..+.
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGT
T ss_pred HHHhcccccCccccCCchHhC
Confidence 344555556666655555543
No 309
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.1e-29 Score=271.21 Aligned_cols=248 Identities=22% Similarity=0.245 Sum_probs=137.5
Q ss_pred EEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCC--CchhhhccccccEEeccC
Q 002321 201 TLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGN--LPETMQKLSLCNFMNLRK 278 (936)
Q Consensus 201 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~~~~l~~l~~L~~L~L~~ 278 (936)
.++++++.++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|+++.. .+..+..+++|+.|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 3444444444 3333222 3455555555555433333345555555555555554421 234444455555555555
Q ss_pred ccccCCCCcccccCCccceecccCceeccccC-cccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCC
Q 002321 279 NLFSGEVPKWIGELESLETLDLSGNKFSGAVP-ISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDL 357 (936)
Q Consensus 279 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 357 (936)
|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+.+.
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~- 165 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN- 165 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG-
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc-
Confidence 5554 244456666677777777777765443 4566667777777777777666666666666666666666665420
Q ss_pred ChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCcccc
Q 002321 358 PQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIG 437 (936)
Q Consensus 358 p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 437 (936)
.++..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+.
T Consensus 166 -------------------------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 220 (306)
T 2z66_A 166 -------------------------FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 220 (306)
T ss_dssp -------------------------EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGT
T ss_pred -------------------------cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhcc
Confidence 0122233455666666666666655566666666666666666666655555555
Q ss_pred CcccCCeeecCCccccccCCCCCCCcC-CCcEEEecCCccCC
Q 002321 438 DLKALNVLDLSENWLNGSIPPEIGGAY-SLKELRLERNFLAG 478 (936)
Q Consensus 438 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 478 (936)
.+++|++|+|++|++++..|..+..++ +|+.|+|++|.+++
T Consensus 221 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 221 CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp TCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 666666666666666655555555553 55566666555553
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.3e-29 Score=269.72 Aligned_cols=229 Identities=24% Similarity=0.266 Sum_probs=145.1
Q ss_pred cEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccccc
Q 002321 103 RKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSS 182 (936)
Q Consensus 103 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 182 (936)
+.++.++++++. +|..+ .++|++|+|++|+|+ .++...|..+++|++|+|++|+|++..|..|+.+++|++|+|++
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCC-ccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 567777777763 44433 356777777777776 45555666666666666666666665566666666666666666
Q ss_pred cc-ccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCC
Q 002321 183 NR-FSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNL 261 (936)
Q Consensus 183 N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 261 (936)
|+ ++...|..|.++++|++|+|++|.+++..|..+.++++|++|++++|++++..+..|..+++|++|+|++|+
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~----- 164 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR----- 164 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC-----
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCc-----
Confidence 65 555545555556666666666665555545555555555555555555554444444455555555555444
Q ss_pred chhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccC
Q 002321 262 PETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCM 341 (936)
Q Consensus 262 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 341 (936)
+++..+..+..+++|++|+|++|++++..|..+.++++|+.|++++|++++..+..+..++
T Consensus 165 -------------------l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 165 -------------------ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp -------------------CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred -------------------ccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 4444444566667777777777777766677777777788888888887766666777778
Q ss_pred CCCEEEccCCcCccCCCh
Q 002321 342 NLVALDFSQNSMNGDLPQ 359 (936)
Q Consensus 342 ~L~~L~Ls~N~l~~~~p~ 359 (936)
+|+.|++++|++.++.+.
T Consensus 226 ~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp TCCEEECCSSCEECSGGG
T ss_pred ccCEEeccCCCccCCCCc
Confidence 888888888877755443
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.5e-30 Score=283.87 Aligned_cols=269 Identities=19% Similarity=0.203 Sum_probs=229.2
Q ss_pred CCCCCCCCCCCCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCccc-CcCCCchh-------hc
Q 002321 52 KLSSWSEDDDTPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLT-GSISPNLA-------KL 123 (936)
Q Consensus 52 ~l~sW~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~l~-------~l 123 (936)
...+|..... |+.|..+.......+++.++++++.+ .+|..+... |++|+|++|+++ ..+|..+. ++
T Consensus 20 ~~~~~~~~~~-c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l 94 (312)
T 1wwl_A 20 PKPDWSSAFN-CLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGI 94 (312)
T ss_dssp SSCCGGGGGG-SSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTT
T ss_pred cccchHHHhh-hhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCc
Confidence 3567876655 66776654332336788999999999 788877665 999999999995 45666665 79
Q ss_pred CCCcEEEccCcccccccchhhh-hcCCCCcEEEccCccCCCCCCCCcccc-----ccccccccccccccCCCCCCCCCCC
Q 002321 124 QNLRVIDLSGNSLSGSIPDEFF-KQCGSLRVISLAKNRFSGKIPSSLSLC-----STLATINLSSNRFSSPLPLGIWGLS 197 (936)
Q Consensus 124 ~~L~~L~Ls~N~l~~~i~~~~f-~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~ 197 (936)
++|++|+|++|++++.+|..+| ..+++|++|+|++|+|++. |..++.+ ++|++|+|++|+|++..|..|.+++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 9999999999999998998876 8999999999999999987 8888888 9999999999999999889999999
Q ss_pred CCCEEecCCCCCCCC--CccCc--cCCCCcceeeccccccccc---CCcccccccCcceeeccccccCCCCc-hhhhccc
Q 002321 198 ALRTLDLSDNLLEGE--IPKGV--ESLKNLRVINLSKNMFSGS---IPDGIGSCSLLRTIDFSENSFSGNLP-ETMQKLS 269 (936)
Q Consensus 198 ~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~L~~N~l~~~---~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~ 269 (936)
+|++|+|++|++.+. .+..+ .++++|++|+|++|++++. ....+..+++|++|+|++|++++..| ..+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 999999999998865 23344 8899999999999999832 22445678999999999999998775 5677789
Q ss_pred cccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccc
Q 002321 270 LCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTG 331 (936)
Q Consensus 270 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 331 (936)
+|+.|+|++|.++ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 9999999999999 6777766 8999999999999976 65 8999999999999999985
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.5e-28 Score=282.89 Aligned_cols=229 Identities=20% Similarity=0.220 Sum_probs=179.7
Q ss_pred CCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEe
Q 002321 124 QNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLD 203 (936)
Q Consensus 124 ~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 203 (936)
++|++|+|++|+|+ .++...|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+
T Consensus 75 ~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQ-MIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCc-eECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 57899999999998 56667778888888888888888877777787788888888888887776666777777777777
Q ss_pred cCCCCCCCCCccCccCCCCcceeeccc-ccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCcccc
Q 002321 204 LSDNLLEGEIPKGVESLKNLRVINLSK-NMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFS 282 (936)
Q Consensus 204 L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 282 (936)
|++|+|+...+..|.++++|++|+|++ |.++...+..|..+++|++|+|++|+++
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~------------------------ 209 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK------------------------ 209 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS------------------------
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc------------------------
Confidence 777777755555677777777777776 3444333345666666666666666554
Q ss_pred CCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhh
Q 002321 283 GEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIF 362 (936)
Q Consensus 283 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 362 (936)
+. | .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+.
T Consensus 210 ~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 210 DM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp SC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred cc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 22 2 367889999999999999999999999999999999999999999999999999999999999999955444332
Q ss_pred -ccCCccccccccccccC
Q 002321 363 -SSGLNKVSFAENKIREG 379 (936)
Q Consensus 363 -~~~l~~l~l~~n~l~~~ 379 (936)
...++.|++.+|.+...
T Consensus 288 ~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 288 PLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp TCTTCCEEECCSSCEECS
T ss_pred cccCCCEEEccCCCcCCC
Confidence 36799999999988653
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2e-28 Score=280.78 Aligned_cols=242 Identities=22% Similarity=0.272 Sum_probs=185.4
Q ss_pred cCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccC
Q 002321 108 SSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSS 187 (936)
Q Consensus 108 ~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 187 (936)
++++++ .+|..+. ++++.|+|++|+|+ .++...|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++
T Consensus 51 ~~~~l~-~iP~~~~--~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~ 126 (440)
T 3zyj_A 51 VRKNLR-EVPDGIS--TNTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 126 (440)
T ss_dssp CSCCCS-SCCSCCC--TTCSEEECCSCCCC-EECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSS
T ss_pred CCCCcC-cCCCCCC--CCCcEEEccCCcCC-eeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCe
Confidence 344555 4566554 67889999999988 5666777888888888888888877777777777777777777777777
Q ss_pred CCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccc-cccccCCcccccccCcceeeccccccCCCCchhhh
Q 002321 188 PLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKN-MFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQ 266 (936)
Q Consensus 188 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~ 266 (936)
+.+..|.++++|++|+|++|.|+...+..|.++++|++|+|++| .++...+..|..+++|++|+|++|+++
T Consensus 127 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-------- 198 (440)
T 3zyj_A 127 IPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-------- 198 (440)
T ss_dssp CCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS--------
T ss_pred eCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc--------
Confidence 66667777777777777777777655566777777777777763 444333445666666666666666554
Q ss_pred ccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEE
Q 002321 267 KLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVAL 346 (936)
Q Consensus 267 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 346 (936)
.+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|
T Consensus 199 -----------------~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 260 (440)
T 3zyj_A 199 -----------------EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260 (440)
T ss_dssp -----------------SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEE
T ss_pred -----------------ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEE
Confidence 223 36678899999999999999889999999999999999999999999999999999999
Q ss_pred EccCCcCccCCChhhh-ccCCccccccccccccC
Q 002321 347 DFSQNSMNGDLPQWIF-SSGLNKVSFAENKIREG 379 (936)
Q Consensus 347 ~Ls~N~l~~~~p~~~~-~~~l~~l~l~~n~l~~~ 379 (936)
+|++|++++..+..+. ...++.|++.+|.+...
T Consensus 261 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 261 NLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp ECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred ECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 9999999955544332 36899999999998753
No 314
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.7e-28 Score=268.97 Aligned_cols=289 Identities=18% Similarity=0.238 Sum_probs=196.6
Q ss_pred HHHhccCCCCCCCCCCCCC-CCCccceeEEecCCC--CceEEeccCCCCCCccccccc--ccCccccEEeccCCcccCcC
Q 002321 42 FKADIQDPNGKLSSWSEDD-DTPCNWFGVKCSPRS--NRVIELTLNGLSLTGRIGRGL--LQLQFLRKLSLSSNNLTGSI 116 (936)
Q Consensus 42 ~k~~~~d~~~~l~sW~~~~-~~~c~w~gv~c~~~~--~~v~~l~l~~~~l~g~~~~~l--~~l~~L~~L~L~~n~l~~~~ 116 (936)
.|.++.|+...+..|...- .+||.|.++-|.... ..+... .|.... .++..+ ...+.+++|+|++|+|+ .+
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~--~g~~~~-~~~~~l~~~~~~~l~~L~L~~n~l~-~l 96 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETR--TGRALK-ATADLLEDATQPGRVALELRSVPLP-QF 96 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCS--HHHHHH-HHHHHHHHHTSTTCCEEEEESSCCS-SC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhccccccccccccc--CCcchh-hhHHHHhcccccceeEEEccCCCch-hc
Confidence 3455556666678887532 237999988874321 222111 110000 111111 23467888888888887 67
Q ss_pred CCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCC
Q 002321 117 SPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGL 196 (936)
Q Consensus 117 ~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 196 (936)
|..+.++++|++|+|++|+|+ .+|. .|..+++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..+...
T Consensus 97 p~~l~~l~~L~~L~L~~n~l~-~lp~-~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~ 173 (328)
T 4fcg_A 97 PDQAFRLSHLQHMTIDAAGLM-ELPD-TMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST 173 (328)
T ss_dssp CSCGGGGTTCSEEEEESSCCC-CCCS-CGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE
T ss_pred ChhhhhCCCCCEEECCCCCcc-chhH-HHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc
Confidence 777888888888888888887 6664 3466777777777777776 556667777777777777766666666554330
Q ss_pred CCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEec
Q 002321 197 SALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNL 276 (936)
Q Consensus 197 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 276 (936)
..+..+.++++|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..+..+++|+.|+|
T Consensus 174 ---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 174 ---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp ---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred ---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 11122445777777777777777 666677777777777777777774 4556777777777777
Q ss_pred cCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCc
Q 002321 277 RKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMN 354 (936)
Q Consensus 277 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 354 (936)
++|.+.+.+|..++.+++|++|+|++|++.+.+|..+.++++|++|+|++|.+.+.+|..+.++++|+.+++..|.+.
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 777777777888888888888888888888888888888888888888888888888888888888888888877664
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=5.5e-29 Score=293.38 Aligned_cols=294 Identities=27% Similarity=0.321 Sum_probs=175.1
Q ss_pred CCCCCCCCCCCCCCccceeEEecC------CCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhc
Q 002321 50 NGKLSSWSEDDDTPCNWFGVKCSP------RSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKL 123 (936)
Q Consensus 50 ~~~l~sW~~~~~~~c~w~gv~c~~------~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l 123 (936)
...+++|....+ ||.|+|..|.- ....++.|++++++++ .+|..+. ++|++|+|++|+|++ +|. .+
T Consensus 9 ~~~w~~W~~~~~-~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l 80 (622)
T 3g06_A 9 DAVWSAWRRAAP-AEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LP 80 (622)
T ss_dssp -CHHHHHHHTCC-GGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CC
T ss_pred HHHHHHHHhcCC-cchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cC
Confidence 345677877666 89997753311 1134666777777666 5565554 566677777766663 343 45
Q ss_pred CCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEe
Q 002321 124 QNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLD 203 (936)
Q Consensus 124 ~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 203 (936)
++|++|+|++|+|+ .+|. .+++|++|+|++|+|++. |. .+++|+.|+|++|+|++ +|. .+++|++|+
T Consensus 81 ~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~---~l~~L~~L~ 147 (622)
T 3g06_A 81 PELRTLEVSGNQLT-SLPV----LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPV---LPPGLQELS 147 (622)
T ss_dssp TTCCEEEECSCCCS-CCCC----CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred CCCCEEEcCCCcCC-cCCC----CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCC---CCCCCCEEE
Confidence 66666666666666 4553 456666666666666542 22 34556666666666554 232 135555555
Q ss_pred cCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccC
Q 002321 204 LSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSG 283 (936)
Q Consensus 204 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 283 (936)
|++|++++ +|. .+++|+.|++++|+|++ +| ..+++|++|+|++|+|+ +
T Consensus 148 Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~------------------------~ 195 (622)
T 3g06_A 148 VSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLA------------------------S 195 (622)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS------------------------C
T ss_pred CcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCC------------------------C
Confidence 55555553 232 12345555555555553 23 22344555555555544 3
Q ss_pred CCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhc
Q 002321 284 EVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFS 363 (936)
Q Consensus 284 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 363 (936)
+|. .+++|+.|++++|.++ .+|. .+++|+.|+|++|+|++ +| ..+++|+.|++++|+|+ .+|.
T Consensus 196 -l~~---~~~~L~~L~L~~N~l~-~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---- 258 (622)
T 3g06_A 196 -LPT---LPSELYKLWAYNNRLT-SLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---- 258 (622)
T ss_dssp -CCC---CCTTCCEEECCSSCCS-SCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC----
T ss_pred -CCC---ccchhhEEECcCCccc-ccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc----
Confidence 222 1345666666666666 3332 23567777777777774 44 34567777777777775 2221
Q ss_pred cCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcc
Q 002321 364 SGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLK 440 (936)
Q Consensus 364 ~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 440 (936)
.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..++
T Consensus 259 --------------------------~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 259 --------------------------LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp --------------------------CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred --------------------------ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 2457888888888887 5677788888888888888888877777666655
No 316
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=1.7e-31 Score=319.42 Aligned_cols=451 Identities=14% Similarity=0.129 Sum_probs=304.4
Q ss_pred CccceeEEecCCCCceEEeccCCCCCCcccc-cccccCccccEEeccCCccc---CcCCC------------chhhcCCC
Q 002321 63 PCNWFGVKCSPRSNRVIELTLNGLSLTGRIG-RGLLQLQFLRKLSLSSNNLT---GSISP------------NLAKLQNL 126 (936)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~L~~n~l~---~~~~~------------~l~~l~~L 126 (936)
|+.|.++.. .....+++.+.. +..+ ..+..+++|++|+|+++... +..|. .+..+++|
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 558888821 223344554432 2223 23678899999999987532 11221 13578899
Q ss_pred cEEEccCcccccccchhhhhcCCCCcEEEccCc-cCCCC-CCCCccccccccccccccccccCCCCCCCC----CCCCCC
Q 002321 127 RVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKN-RFSGK-IPSSLSLCSTLATINLSSNRFSSPLPLGIW----GLSALR 200 (936)
Q Consensus 127 ~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~ 200 (936)
++|+|++|.+++..+..+...+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 999999999987666665557999999999999 55532 334445789999999999998876554443 677999
Q ss_pred EEecCCCC--CCCC-CccCccCCCCcceeecccc-cccccCCcccccccCcceeecccc-------ccCCCCchhhhccc
Q 002321 201 TLDLSDNL--LEGE-IPKGVESLKNLRVINLSKN-MFSGSIPDGIGSCSLLRTIDFSEN-------SFSGNLPETMQKLS 269 (936)
Q Consensus 201 ~L~L~~N~--l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N-------~l~~~~~~~l~~l~ 269 (936)
+|+|++|. ++.. ++..+.++++|++|+|++| .+++ ++..+..+++|++|+++.+ .+.+ ++..+.+++
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~ 265 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCK 265 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCT
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCC
Confidence 99999997 3211 1122345699999999998 5554 7778888999999996554 3333 344677888
Q ss_pred cccEE-eccCccccCCCCcccccCCccceecccCceeccccCc-ccccccccceEEccCCccccc-CChhhhccCCCCEE
Q 002321 270 LCNFM-NLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPI-SIGNLQRLKVLNFSANRLTGS-LPDSMANCMNLVAL 346 (936)
Q Consensus 270 ~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L 346 (936)
+|+.| .+..... +.++..+..+++|++|+|++|.+++.... .+..+++|+.|++++| ++.. ++.....+++|+.|
T Consensus 266 ~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L 343 (594)
T 2p1m_B 266 ELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLREL 343 (594)
T ss_dssp TCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEE
T ss_pred CcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEE
Confidence 88888 4443322 34455556778899999999987654332 2457889999999988 4432 23334458889999
Q ss_pred EccCC---------cCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhc-ccc
Q 002321 347 DFSQN---------SMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIG-ALS 416 (936)
Q Consensus 347 ~Ls~N---------~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~ 416 (936)
+++++ .+++..... + ...+++|+.|+++.|++++.....+. .++
T Consensus 344 ~L~~~~~~g~~~~~~l~~~~l~~-----------------------l---~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~ 397 (594)
T 2p1m_B 344 RVFPSEPFVMEPNVALTEQGLVS-----------------------V---SMGCPKLESVLYFCRQMTNAALITIARNRP 397 (594)
T ss_dssp EEECSCTTCSSCSSCCCHHHHHH-----------------------H---HHHCTTCCEEEEEESCCCHHHHHHHHHHCT
T ss_pred EEecCcccccccCCCCCHHHHHH-----------------------H---HHhchhHHHHHHhcCCcCHHHHHHHHhhCC
Confidence 88543 222110000 0 01257888998888888876666665 578
Q ss_pred cCCeeecc--C----ccccCCC-----CccccCcccCCeeecCCccccccCCCCCCC-cCCCcEEEecCCccCCcCcccc
Q 002321 417 GLQLLNLS--R----NSLVGPI-----PVAIGDLKALNVLDLSENWLNGSIPPEIGG-AYSLKELRLERNFLAGKIPTSI 484 (936)
Q Consensus 417 ~L~~L~L~--~----N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~l 484 (936)
+|+.|+|+ + |.+++.. +..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+
T Consensus 398 ~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l 476 (594)
T 2p1m_B 398 NMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHV 476 (594)
T ss_dssp TCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHH
T ss_pred CcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHH
Confidence 99999998 4 5555221 12256778899999977 666544444444 7889999999999876655555
Q ss_pred -ccccccccccccCccccCCCcc-cccccCCccEEEcCCCcccCCCCccc-ccccccCeeecCCCcccc
Q 002321 485 -ENCSSLVSLILSKNNLTGPIPI-AIAKLTNLQNVDLSFNSLTGGLPKQL-VNLVHLSSFNISHNHLQG 550 (936)
Q Consensus 485 -~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~ls~N~l~~ 550 (936)
..+++|++|+|++|++++..+. ....+++|++|+|++|+++..-...+ ..+++|+...+..+.-..
T Consensus 477 ~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 477 LSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp HHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred HhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 6689999999999998654443 34568899999999998854333344 456777666666665443
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=8.1e-30 Score=278.69 Aligned_cols=248 Identities=21% Similarity=0.182 Sum_probs=180.8
Q ss_pred hccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCE
Q 002321 266 QKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVA 345 (936)
Q Consensus 266 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 345 (936)
..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..+ +..+++|++|++++|++++.. ..++|+.
T Consensus 31 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~ 103 (317)
T 3o53_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (317)
T ss_dssp TTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred ccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCE
Confidence 333444444444444444444445555555555555555554333 555566666666666655322 2356677
Q ss_pred EEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccC
Q 002321 346 LDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSR 425 (936)
Q Consensus 346 L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 425 (936)
|++++|++.+..+ ..+++|++|++++|++++..+..+..+++|++|+|++
T Consensus 104 L~l~~n~l~~~~~------------------------------~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (317)
T 3o53_A 104 LHAANNNISRVSC------------------------------SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (317)
T ss_dssp EECCSSCCSEEEE------------------------------CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTT
T ss_pred EECCCCccCCcCc------------------------------cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCC
Confidence 7777776652211 1246788888888888887777888889999999999
Q ss_pred ccccCCCCccc-cCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCC
Q 002321 426 NSLVGPIPVAI-GDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPI 504 (936)
Q Consensus 426 N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 504 (936)
|++++..+..+ ..+++|++|+|++|.+++. +. ...+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+
T Consensus 154 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l 229 (317)
T 3o53_A 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LI 229 (317)
T ss_dssp SCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EE
T ss_pred CCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-ch
Confidence 99987767666 4788999999999999865 33 3358899999999999994 5666999999999999999999 57
Q ss_pred cccccccCCccEEEcCCCccc-CCCCcccccccccCeeecC-CCcccccCCC
Q 002321 505 PIAIAKLTNLQNVDLSFNSLT-GGLPKQLVNLVHLSSFNIS-HNHLQGELPA 554 (936)
Q Consensus 505 p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~ls-~N~l~~~~p~ 554 (936)
|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+++ .+.++|..|.
T Consensus 230 ~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 230 EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred hhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 888999999999999999998 7788999999999999998 4566765543
No 318
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=1.1e-27 Score=255.46 Aligned_cols=217 Identities=22% Similarity=0.281 Sum_probs=176.0
Q ss_pred CCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccc
Q 002321 62 TPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIP 141 (936)
Q Consensus 62 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~ 141 (936)
++|.|.|+.|.-. +.+..+++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+ .+|
T Consensus 3 ~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~ 77 (270)
T 2o6q_A 3 ALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLP 77 (270)
T ss_dssp CCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCC
T ss_pred ccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeC
Confidence 3899999998643 45678899999988 4676554 67999999999999877778999999999999999998 788
Q ss_pred hhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCC
Q 002321 142 DEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLK 221 (936)
Q Consensus 142 ~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 221 (936)
..+|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.|++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 88888999999999999999877777788888888888888888887777888888888888888888866666678888
Q ss_pred CcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccC
Q 002321 222 NLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSG 283 (936)
Q Consensus 222 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 283 (936)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 88888888888887766677788888888888888776655566666666666666666553
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5e-27 Score=276.72 Aligned_cols=267 Identities=27% Similarity=0.316 Sum_probs=135.9
Q ss_pred cccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecc
Q 002321 174 TLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFS 253 (936)
Q Consensus 174 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 253 (936)
+++.|++++|.|+ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 4667777777776 3454443 56677777777666 3443 34566666666666663 333 44566666666
Q ss_pred ccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccC
Q 002321 254 ENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSL 333 (936)
Q Consensus 254 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 333 (936)
+|++++..+ .+++|+.|++++|+|++ +|.. +++|++|+|++|++++ +
T Consensus 110 ~N~l~~l~~----------------------------~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l 156 (622)
T 3g06_A 110 SNPLTHLPA----------------------------LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-L 156 (622)
T ss_dssp SCCCCCCCC----------------------------CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-C
T ss_pred CCcCCCCCC----------------------------CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-c
Confidence 666553211 23344444444444442 2221 2445555555555543 2
Q ss_pred ChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhc
Q 002321 334 PDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIG 413 (936)
Q Consensus 334 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 413 (936)
|. ...+|+.|++++|.+++ +| ..+++|+.|+|++|+|++. |.
T Consensus 157 ~~---~~~~L~~L~L~~N~l~~-l~------------------------------~~~~~L~~L~Ls~N~l~~l-~~--- 198 (622)
T 3g06_A 157 PA---LPSELCKLWAYNNQLTS-LP------------------------------MLPSGLQELSVSDNQLASL-PT--- 198 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSC-CC------------------------------CCCTTCCEEECCSSCCSCC-CC---
T ss_pred CC---ccCCCCEEECCCCCCCC-Cc------------------------------ccCCCCcEEECCCCCCCCC-CC---
Confidence 21 12344455555554431 11 1134555555555555532 21
Q ss_pred ccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccc
Q 002321 414 ALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSL 493 (936)
Q Consensus 414 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 493 (936)
.+++|+.|++++|.++. +|.. +++|+.|+|++|.|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|
T Consensus 199 ~~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L 266 (622)
T 3g06_A 199 LPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSL 266 (622)
T ss_dssp CCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEE
T ss_pred ccchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEE
Confidence 12455555555555552 2321 2455556666665553 33 23355556666666555 3443 34555555
Q ss_pred cccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccc
Q 002321 494 ILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNL 535 (936)
Q Consensus 494 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 535 (936)
+|++|+|+ .+|..+.++++|+.|+|++|++++.+|..+..+
T Consensus 267 ~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 267 SVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp ECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred eCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 55555555 445555555556666666665555555544444
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.5e-29 Score=272.75 Aligned_cols=257 Identities=19% Similarity=0.189 Sum_probs=145.9
Q ss_pred ccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccc
Q 002321 102 LRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLS 181 (936)
Q Consensus 102 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 181 (936)
++.++++.+++.......+..+++|++|+|++|+|+ .++...|..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLS-QISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCC-CCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccC-cCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 445566666665444444555666777777777776 3555556666667777776666665443 6666666666666
Q ss_pred cccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCC
Q 002321 182 SNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNL 261 (936)
Q Consensus 182 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 261 (936)
+|+|++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..+++|++|+|++|.+++
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-- 158 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-- 158 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE--
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc--
Confidence 66665432 2255666666666665433322 3445555555555555444455555555555555555543
Q ss_pred chhhhccccccEEeccCccccCCCCccc-ccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhcc
Q 002321 262 PETMQKLSLCNFMNLRKNLFSGEVPKWI-GELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANC 340 (936)
Q Consensus 262 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 340 (936)
..+..+ ..+++|++|+|++|++++. +. ...+++|++|+|++|++++. |..+..+
T Consensus 159 ----------------------~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l 213 (317)
T 3o53_A 159 ----------------------VNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSA 213 (317)
T ss_dssp ----------------------EEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGG
T ss_pred ----------------------ccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhccc
Confidence 333333 2455666666666666543 21 22356666777777766643 3346666
Q ss_pred CCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccC-CCChhhhcccccCC
Q 002321 341 MNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFS-GETPATIGALSGLQ 419 (936)
Q Consensus 341 ~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~ 419 (936)
++|+.|++++|++++ +| ..+..+++|+.|+|++|.+. +..+..+..+++|+
T Consensus 214 ~~L~~L~L~~N~l~~-l~---------------------------~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~ 265 (317)
T 3o53_A 214 AGVTWISLRNNKLVL-IE---------------------------KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQ 265 (317)
T ss_dssp TTCSEEECTTSCCCE-EC---------------------------TTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHH
T ss_pred CcccEEECcCCcccc-hh---------------------------hHhhcCCCCCEEEccCCCccCcCHHHHHhccccce
Confidence 666666666666651 11 12234556666666666665 55566666666666
Q ss_pred eeecc
Q 002321 420 LLNLS 424 (936)
Q Consensus 420 ~L~L~ 424 (936)
.|+++
T Consensus 266 ~l~l~ 270 (317)
T 3o53_A 266 TVAKQ 270 (317)
T ss_dssp HHHHH
T ss_pred EEECC
Confidence 66666
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=6.2e-29 Score=291.27 Aligned_cols=186 Identities=15% Similarity=0.084 Sum_probs=130.9
Q ss_pred cccccCceEEEEEEeC-CCcEEEEEEeeccCc---------cchHHHHHHHHHHHHcC-CCCCcceeeeEEEeCCeeEEE
Q 002321 697 ELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL---------VKSQEDFEREVKKLGKV-RHPNLVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (936)
..+.|++|.+..++.. .|+.||||++..... ....+++.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 4566777766665522 489999999965421 12246799999999999 799999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCcc
Q 002321 766 YEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDR 845 (936)
Q Consensus 766 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (936)
|||++|++|.+++.+... ++.. +|+.||+.||+|+|++|||||||||+|||++++|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~- 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC- 393 (569)
T ss_dssp EECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred EecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC-
Confidence 999999999999987543 5554 588999999999999999999999999999999999999999998664322
Q ss_pred ccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCC
Q 002321 846 YVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRP 892 (936)
Q Consensus 846 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~P 892 (936)
.......||+.|||||++.+ .+..++|+||+|++++++.++..|
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g--~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAE--NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC-------------------CCCCTTHHH
T ss_pred -ccccCceechhhccHHHhCC--CCCCcccccccccchhhhccccch
Confidence 22344679999999999843 357789999999998887665444
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4e-30 Score=307.46 Aligned_cols=416 Identities=15% Similarity=0.156 Sum_probs=291.0
Q ss_pred cEEeccCCcccCcCCCchhhcCCCcEEEccCccccccc---c-----------hhhhhcCCCCcEEEccCccCCCCCCCC
Q 002321 103 RKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSI---P-----------DEFFKQCGSLRVISLAKNRFSGKIPSS 168 (936)
Q Consensus 103 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i---~-----------~~~f~~l~~L~~L~L~~N~l~~~~p~~ 168 (936)
+.+++++.... .....+..+++|+.|+|+++.....+ | ..++..+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 35566544322 12245678899999999997632122 1 234567899999999999988776666
Q ss_pred cc-ccccccccccccc-cccCC-CCCCCCCCCCCCEEecCCCCCCCCCccCcc----CCCCcceeeccccc--cccc-CC
Q 002321 169 LS-LCSTLATINLSSN-RFSSP-LPLGIWGLSALRTLDLSDNLLEGEIPKGVE----SLKNLRVINLSKNM--FSGS-IP 238 (936)
Q Consensus 169 ~~-~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~~L~L~~N~--l~~~-~p 238 (936)
+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++.. ++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~ 204 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALE 204 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHH
Confidence 65 6899999999998 55542 233344789999999999998865554443 66799999999887 2211 11
Q ss_pred cccccccCcceeecccc-ccCCCCchhhhccccccEEeccCc-------cccCCCCcccccCCcccee-cccCceecccc
Q 002321 239 DGIGSCSLLRTIDFSEN-SFSGNLPETMQKLSLCNFMNLRKN-------LFSGEVPKWIGELESLETL-DLSGNKFSGAV 309 (936)
Q Consensus 239 ~~l~~l~~L~~L~Ls~N-~l~~~~~~~l~~l~~L~~L~L~~N-------~l~~~~~~~~~~l~~L~~L-~L~~N~l~~~~ 309 (936)
..+..+++|++|+|++| .+.+ ++..+..+++|+.|+++.+ .+.+ ++..+.++++|+.| .+.+... +.+
T Consensus 205 ~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l 281 (594)
T 2p1m_B 205 RLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYL 281 (594)
T ss_dssp HHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGG
T ss_pred HHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhH
Confidence 22345689999999988 4444 7777888889999985443 4443 33467788888888 4544433 244
Q ss_pred CcccccccccceEEccCCcccccCC-hhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCC
Q 002321 310 PISIGNLQRLKVLNFSANRLTGSLP-DSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSG 388 (936)
Q Consensus 310 ~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~ 388 (936)
+..+..+++|++|+|++|.+++... ..+..+++|+.|++++| +....... ..
T Consensus 282 ~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~--------------------------l~ 334 (594)
T 2p1m_B 282 PAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEV--------------------------LA 334 (594)
T ss_dssp GGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHH--------------------------HH
T ss_pred HHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHH--------------------------HH
Confidence 5555577888999998888765432 33557888888888877 33111000 01
Q ss_pred CCCCcccEEecc---------CcccCCCChhhhc-ccccCCeeeccCccccCCCCcccc-CcccCCeeecC--C----cc
Q 002321 389 SSFESLQFLDLS---------HNEFSGETPATIG-ALSGLQLLNLSRNSLVGPIPVAIG-DLKALNVLDLS--E----NW 451 (936)
Q Consensus 389 ~~l~~L~~L~Ls---------~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~ 451 (936)
..+++|++|+++ .+.+++.....+. .+++|++|.++.|.+++.....+. .+++|+.|+|+ + |.
T Consensus 335 ~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~ 414 (594)
T 2p1m_B 335 STCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDY 414 (594)
T ss_dssp HHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCT
T ss_pred HhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccc
Confidence 235778999883 3556544334443 488999999999999865555554 58899999999 4 55
Q ss_pred cccc-----CCCCCCCcCCCcEEEecCCccCCcCcccccc-ccccccccccCccccCCCcccc-cccCCccEEEcCCCcc
Q 002321 452 LNGS-----IPPEIGGAYSLKELRLERNFLAGKIPTSIEN-CSSLVSLILSKNNLTGPIPIAI-AKLTNLQNVDLSFNSL 524 (936)
Q Consensus 452 l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l 524 (936)
+++. ++..+..+++|+.|+|++ .+++..+..++. +++|++|+|++|.+++..+..+ ..+++|++|+|++|++
T Consensus 415 l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 415 LTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp TTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred ccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 6521 111256778999999987 777666667766 8999999999999986655555 6789999999999999
Q ss_pred cCCCCc-ccccccccCeeecCCCcccc
Q 002321 525 TGGLPK-QLVNLVHLSSFNISHNHLQG 550 (936)
Q Consensus 525 ~~~~p~-~l~~l~~L~~L~ls~N~l~~ 550 (936)
++..+. .+..+++|+.|++++|+++.
T Consensus 494 ~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 494 GDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp CHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred cHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 654443 44568999999999998853
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.1e-28 Score=280.58 Aligned_cols=234 Identities=16% Similarity=0.184 Sum_probs=135.8
Q ss_pred cCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccc
Q 002321 98 QLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLAT 177 (936)
Q Consensus 98 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 177 (936)
.+++|++|+|++|+|++..|..|..+++|++|+|++|.|++..| |..+++|++|+|++|.|++.. ..++|++
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCC-----CCCCcCE
Confidence 34478888888888887777778888888888888888875444 677777777777777776432 2266666
Q ss_pred cccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccc-cccCcceeeccccc
Q 002321 178 INLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIG-SCSLLRTIDFSENS 256 (936)
Q Consensus 178 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~ 256 (936)
|+|++|+|++..+. .+++|++|+|++|.+++..|..+.++++|++|+|++|.+++.+|..+. .+++|++|+|++|.
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 66666666665443 245666666666666666666666666666666666666665555554 56666666666666
Q ss_pred cCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCccc-ccCCh
Q 002321 257 FSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLT-GSLPD 335 (936)
Q Consensus 257 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~ 335 (936)
|++..+ +..+++|+.|+|++|.+++..| .+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|.+. +.+|.
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 654311 2234445555555555443222 24444444444444444442 3333444444444444444444 33333
Q ss_pred hhhccCCCCEE
Q 002321 336 SMANCMNLVAL 346 (936)
Q Consensus 336 ~~~~l~~L~~L 346 (936)
.+..++.|+.+
T Consensus 257 ~~~~l~~L~~l 267 (487)
T 3oja_A 257 FFSKNQRVQTV 267 (487)
T ss_dssp HHTTCHHHHHH
T ss_pred HHHhCCCCcEE
Confidence 34433333333
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=7.6e-28 Score=278.37 Aligned_cols=234 Identities=21% Similarity=0.181 Sum_probs=174.2
Q ss_pred cccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEcc
Q 002321 270 LCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFS 349 (936)
Q Consensus 270 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 349 (936)
+|+.|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45555555555555555555666666666666666665444 6666666666666666664322 2667777777
Q ss_pred CCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCcccc
Q 002321 350 QNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLV 429 (936)
Q Consensus 350 ~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 429 (936)
+|.+.+..+ ..+++|+.|+|++|.+++..|..++.+++|++|+|++|.++
T Consensus 108 ~N~l~~~~~------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 157 (487)
T 3oja_A 108 NNNISRVSC------------------------------SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID 157 (487)
T ss_dssp SSCCCCEEE------------------------------CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCC
T ss_pred CCcCCCCCc------------------------------cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCC
Confidence 777653221 12467888899999988888888888899999999999998
Q ss_pred CCCCcccc-CcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccc
Q 002321 430 GPIPVAIG-DLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAI 508 (936)
Q Consensus 430 ~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 508 (936)
+.+|..+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|+|++ +|..+
T Consensus 158 ~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 158 TVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp EEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred CcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 87787776 788999999999999865 32 3458899999999999985 45558889999999999999985 77788
Q ss_pred cccCCccEEEcCCCccc-CCCCcccccccccCeeecC
Q 002321 509 AKLTNLQNVDLSFNSLT-GGLPKQLVNLVHLSSFNIS 544 (936)
Q Consensus 509 ~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~ls 544 (936)
..+++|+.|+|++|++. +.+|..+..++.|+.++++
T Consensus 234 ~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 88999999999999988 6677888888888888875
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.5e-25 Score=239.94 Aligned_cols=214 Identities=23% Similarity=0.259 Sum_probs=112.6
Q ss_pred ccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccc
Q 002321 100 QFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATIN 179 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 179 (936)
++|++|+|++|+|++..+..|.++++|++|+|++|+++ .++...|..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 35777777777777665556777777777777777766 45555555566666666666655555445555555555555
Q ss_pred cccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCC
Q 002321 180 LSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSG 259 (936)
Q Consensus 180 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 259 (936)
+++|++++..+..+..+++|++|+|++|.+++. .+|..|..+++|++|+|++|++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------------~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSF-----------------------KLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-----------------------CCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCcccee-----------------------cCchhhccCCCCCEEECCCCCCCc
Confidence 555555544443444444444444444444431 124444444444444444444443
Q ss_pred CCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhc
Q 002321 260 NLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMAN 339 (936)
Q Consensus 260 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 339 (936)
..+..+..+.+|+.+.+ .|++++|++++..+..+. ..+|+.|+|++|++++..+..|..
T Consensus 164 ~~~~~~~~l~~L~~l~l--------------------~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNL--------------------SLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp ECGGGGHHHHTCTTCCE--------------------EEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTT
T ss_pred CCHHHhhhhhhccccce--------------------eeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcc
Confidence 33333333332221000 344555555433333332 235666666666666554555566
Q ss_pred cCCCCEEEccCCcCccCCC
Q 002321 340 CMNLVALDFSQNSMNGDLP 358 (936)
Q Consensus 340 l~~L~~L~Ls~N~l~~~~p 358 (936)
+++|+.|++++|++.+..+
T Consensus 223 l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCSCCEEECCSSCBCCCTT
T ss_pred cccccEEEccCCcccccCC
Confidence 6666666666666666554
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.5e-25 Score=239.73 Aligned_cols=204 Identities=20% Similarity=0.203 Sum_probs=126.1
Q ss_pred CcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeeccc
Q 002321 151 LRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSK 230 (936)
Q Consensus 151 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (936)
|++|+|++|+|++..+..|..+++|++|+|++|+++++.+..|.++++|++|+|++|.+++..+..|.++++|++|++++
T Consensus 30 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 109 (276)
T 2z62_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (276)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCC
Confidence 33444444444333333444444455555555544444444555555555555555555544445555555555555555
Q ss_pred ccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccC
Q 002321 231 NMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVP 310 (936)
Q Consensus 231 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 310 (936)
|++++..+..+..+++|++|++++|++++. .+|..+..+++|++|+|++|++++..+
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------------~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 110 TNLASLENFPIGHLKTLKELNVAHNLIQSF-----------------------KLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp SCCCCSTTCCCTTCTTCCEEECCSSCCCCC-----------------------CCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCccccCchhcccCCCCCEEECcCCcccee-----------------------cCchhhccCCCCCEEECCCCCCCcCCH
Confidence 555544444555555666666665555432 235566667777777777777776666
Q ss_pred cccccccccc----eEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhh-ccCCcccccccccccc
Q 002321 311 ISIGNLQRLK----VLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIF-SSGLNKVSFAENKIRE 378 (936)
Q Consensus 311 ~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~l~~l~l~~n~l~~ 378 (936)
..+..+++|+ .|++++|++++..+..+. ..+|+.|++++|++++..+..+. ...++.+++.+|.+..
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 6676666666 899999999976666555 45899999999999855443322 3689999999999874
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=3.6e-25 Score=236.08 Aligned_cols=209 Identities=20% Similarity=0.237 Sum_probs=117.4
Q ss_pred cccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccc
Q 002321 96 LLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTL 175 (936)
Q Consensus 96 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 175 (936)
+.++++|++|++++|.++.. +.+..+++|++|+|++|++++ ++ .|..+++|++|+|++|+|++..+..|+.+++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 44556666666666666532 345666666666666666653 22 45556666666666666665555555566666
Q ss_pred cccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccc
Q 002321 176 ATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSEN 255 (936)
Q Consensus 176 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 255 (936)
++|+|++|++++..+..|.++++|++|+|++|++++..+..+.++++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 66666666666555555556666666666666665555555555566666666666665555555555556666666665
Q ss_pred ccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccc
Q 002321 256 SFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNL 316 (936)
Q Consensus 256 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l 316 (936)
++++..+..+..+++|+.|+|++|.+.+. +++|+.|++..|+++|.+|..++.+
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 55555555555555555555555554432 2344555555555555555444433
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=9.6e-26 Score=240.54 Aligned_cols=231 Identities=19% Similarity=0.191 Sum_probs=187.9
Q ss_pred cCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccc
Q 002321 98 QLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLAT 177 (936)
Q Consensus 98 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 177 (936)
.+..+..+++..+.+++. ..+..+++|+.|++++|.++ .++ .+..+++|++|+|++|++++. ..++.+++|++
T Consensus 17 ~~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 89 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ--GIQYLPNVRYLALGGNKLHDI--SALKELTNLTY 89 (272)
T ss_dssp HHHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT--TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCE
T ss_pred hHHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc--ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCE
Confidence 445666778888888755 45788999999999999987 444 368899999999999999853 47888899999
Q ss_pred cccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccccc
Q 002321 178 INLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSF 257 (936)
Q Consensus 178 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 257 (936)
|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|++
T Consensus 90 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 169 (272)
T 3rfs_A 90 LILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCc
Confidence 99999999988787888899999999999999877777788888999999999998877777788888899999999988
Q ss_pred CCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhh
Q 002321 258 SGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSM 337 (936)
Q Consensus 258 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 337 (936)
++..+..+..+++|+.|+|++|.+++..+..+..+++|++|+|++|.+.+. +++|+.|+++.|.++|.+|..+
T Consensus 170 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 170 QSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred CccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 877777788888888888888888877777778888888888888877643 3467777788888888777776
Q ss_pred hccCC
Q 002321 338 ANCMN 342 (936)
Q Consensus 338 ~~l~~ 342 (936)
+.+..
T Consensus 243 ~~~~~ 247 (272)
T 3rfs_A 243 GSVAP 247 (272)
T ss_dssp SCBCG
T ss_pred cccCC
Confidence 65543
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.8e-24 Score=230.54 Aligned_cols=202 Identities=23% Similarity=0.288 Sum_probs=120.8
Q ss_pred cccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINL 180 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 180 (936)
.++.+++++++++. +|..+. ++|++|+|++|+|+ .++...|..+++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 35667777777773 555443 46777777777776 456556666666666666666666555555566666666666
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCC
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGN 260 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (936)
++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 66666665555556666666666666666655555555666666666666666554444455555555555555555544
Q ss_pred CchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCccc
Q 002321 261 LPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLT 330 (936)
Q Consensus 261 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 330 (936)
.+. .|..+++|++|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 173 ~~~------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 173 PEG------------------------AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CTT------------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred Chh------------------------HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 444 4445555555555555555444444555555666666666554
No 330
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=9.1e-25 Score=230.03 Aligned_cols=191 Identities=23% Similarity=0.270 Sum_probs=152.7
Q ss_pred CccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccch
Q 002321 63 PCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPD 142 (936)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~ 142 (936)
||.|.|.+|.. ....+++++++++ .+|..+. +.|++|+|++|+|++..+..|.++++|++|+|++|+|+ .++.
T Consensus 4 Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~ 76 (251)
T 3m19_A 4 CETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSA 76 (251)
T ss_dssp CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCT
T ss_pred CCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC-ccCH
Confidence 78999999963 3446788888887 5666655 58889999999998888888888999999999999988 4666
Q ss_pred hhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCC
Q 002321 143 EFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKN 222 (936)
Q Consensus 143 ~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 222 (936)
..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 77888888888888888888777777888888888888888888777777778888888888888888666667777888
Q ss_pred cceeecccccccccCCcccccccCcceeeccccccCCC
Q 002321 223 LRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGN 260 (936)
Q Consensus 223 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (936)
|++|+|++|++++..+..|..+++|++|+|++|.++..
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88888888888776666777777777777777777654
No 331
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=9.5e-26 Score=262.82 Aligned_cols=187 Identities=14% Similarity=0.195 Sum_probs=148.0
Q ss_pred CCCcccccCceEEEEEEeCCCcEEEEEEeeccCccc-------hHHHHHHHHHHHHcCCCCCcceeeeEEEeCCeeEEEE
Q 002321 694 KDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVK-------SQEDFEREVKKLGKVRHPNLVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 694 ~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (936)
..+.||+|+||+||+|+. .++.+|+|+........ ..+++.+|++++++++||||+++..++......++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 356899999999999965 47889999874432211 1355899999999999999997777777777889999
Q ss_pred EecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccc
Q 002321 767 EFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRY 846 (936)
Q Consensus 767 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 846 (936)
||+++++|.+++.. +..++.|+++||+|||+++|+||||||+|||++. .+||+|||+++........
T Consensus 419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~ 485 (540)
T 3en9_A 419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK 485 (540)
T ss_dssp ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence 99999999999875 4479999999999999999999999999999998 9999999999987543221
Q ss_pred c-----ccccccCcccccCcccccCc-ccCCchhhHHHHHHHHHHHHcCCCCCC
Q 002321 847 V-----LSSKIQSALGYMAPEFACRT-VKITDKCDVYGFGVLVLEVVTGKRPLS 894 (936)
Q Consensus 847 ~-----~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwSlG~~l~el~~g~~Pf~ 894 (936)
. ......||+.|||||++... ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1 22456789999999988431 357888999999999999998888875
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.1e-24 Score=231.96 Aligned_cols=155 Identities=23% Similarity=0.280 Sum_probs=75.8
Q ss_pred cccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccc
Q 002321 96 LLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTL 175 (936)
Q Consensus 96 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 175 (936)
+.++++++++++++|+++ .+|..+. ++|++|+|++|+|+ .++...|..+++|++|+|++|+|++..+. +.+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCC-ccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 556666777777777766 3444443 46666666666666 44445556666666666666666533221 344444
Q ss_pred cccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccc
Q 002321 176 ATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSEN 255 (936)
Q Consensus 176 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 255 (936)
++|+|++|+|+. +|..+.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 80 ~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 444444444442 3334444444444444444444333333444444444444444444333333333333333333333
Q ss_pred cc
Q 002321 256 SF 257 (936)
Q Consensus 256 ~l 257 (936)
+|
T Consensus 159 ~l 160 (290)
T 1p9a_G 159 NL 160 (290)
T ss_dssp CC
T ss_pred cC
Confidence 33
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=6.2e-24 Score=228.26 Aligned_cols=196 Identities=22% Similarity=0.221 Sum_probs=101.3
Q ss_pred ceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEc
Q 002321 77 RVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISL 156 (936)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L 156 (936)
.++.+++++++++ .+|+.+. +.+++|+|++|+|++..+..|.++++|++|+|++|+|+ .++.. ..+++|++|+|
T Consensus 11 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~--~~l~~L~~L~L 84 (290)
T 1p9a_G 11 SHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD--GTLPVLGTLDL 84 (290)
T ss_dssp TCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC--SCCTTCCEEEC
T ss_pred CccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCC--CCCCcCCEEEC
Confidence 3445555555554 3444332 45555555555555555555555555555555555555 23322 45555555555
Q ss_pred cCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeeccccccccc
Q 002321 157 AKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGS 236 (936)
Q Consensus 157 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (936)
++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++.
T Consensus 85 s~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 163 (290)
T 1p9a_G 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (290)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred CCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCcc
Confidence 555555 3445555555555555555555555555555555555555555555544444455555555555555555544
Q ss_pred CCcccccccCcceeeccccccCCCCchhhhccccccEEeccCcc
Q 002321 237 IPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNL 280 (936)
Q Consensus 237 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 280 (936)
.+..|..+++|++|+|++|+|+ .+|..+..+..|+.++|++|.
T Consensus 164 ~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np 206 (290)
T 1p9a_G 164 PAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNP 206 (290)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCC
T ss_pred CHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCC
Confidence 4444455555555555555554 233333333333333333333
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=5.2e-24 Score=231.87 Aligned_cols=224 Identities=16% Similarity=0.219 Sum_probs=167.7
Q ss_pred CCcEEEccCcccccccchh--hhhcCCCCcEEEccCccCCCCCCCCc--cccccccccccccccccCCCC----CCCCCC
Q 002321 125 NLRVIDLSGNSLSGSIPDE--FFKQCGSLRVISLAKNRFSGKIPSSL--SLCSTLATINLSSNRFSSPLP----LGIWGL 196 (936)
Q Consensus 125 ~L~~L~Ls~N~l~~~i~~~--~f~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l 196 (936)
.++.|++.++.++...-.. -+..+++|++|+|++|++++..|..+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4667777776665321111 12345668888888888887777777 778888888888888887554 344568
Q ss_pred CCCCEEecCCCCCCCCCccCccCCCCcceeeccccccccc---C-CcccccccCcceeeccccccCCCCch----hhhcc
Q 002321 197 SALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGS---I-PDGIGSCSLLRTIDFSENSFSGNLPE----TMQKL 268 (936)
Q Consensus 197 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~-p~~l~~l~~L~~L~Ls~N~l~~~~~~----~l~~l 268 (936)
++|++|+|++|++++..+..+.++++|++|+|++|++.+. . +..+..+++|++|+|++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 8888888888888877778888888888888888887642 1 2334678888888888888863 232 35677
Q ss_pred ccccEEeccCccccCCCCcccccC---CccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCE
Q 002321 269 SLCNFMNLRKNLFSGEVPKWIGEL---ESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVA 345 (936)
Q Consensus 269 ~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 345 (936)
++|+.|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 888888888888888877777766 68999999999998 5666664 7899999999999864 33 677889999
Q ss_pred EEccCCcCc
Q 002321 346 LDFSQNSMN 354 (936)
Q Consensus 346 L~Ls~N~l~ 354 (936)
|++++|+++
T Consensus 299 L~L~~N~l~ 307 (310)
T 4glp_A 299 LTLDGNPFL 307 (310)
T ss_dssp EECSSTTTS
T ss_pred EECcCCCCC
Confidence 999999886
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=2.4e-26 Score=253.78 Aligned_cols=235 Identities=21% Similarity=0.254 Sum_probs=157.6
Q ss_pred CccceeEEecCCCCceEEeccCCCCCCcccccccccC--ccccEEeccCCcccCcCCCchhhcCCCcEEEccCccccccc
Q 002321 63 PCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQL--QFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSI 140 (936)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i 140 (936)
|+.|.++.|++ ..+..++++++.+. +..+..+ +.++.|++++|.+++..+. +..+++|++|+|++|.+++.-
T Consensus 36 c~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 56899999874 56788899888776 4556777 8899999999999876555 567899999999999887552
Q ss_pred chhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccc-cccCC-CCCCCCCCCCCCEEecCCC-CCCCC-CccC
Q 002321 141 PDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSN-RFSSP-LPLGIWGLSALRTLDLSDN-LLEGE-IPKG 216 (936)
Q Consensus 141 ~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~ 216 (936)
....+..+++|++|+|++|++++..+..++.+++|++|+|++| .+++. .+..+.++++|++|+|++| .+++. ++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 3355778888888888888887766777777777777777777 56642 4445666777777777777 66643 4555
Q ss_pred ccCCC-Ccceeecccc--ccc-ccCCcccccccCcceeeccccc-cCCCCchhhhccccccEEeccCcc-ccCCCCcccc
Q 002321 217 VESLK-NLRVINLSKN--MFS-GSIPDGIGSCSLLRTIDFSENS-FSGNLPETMQKLSLCNFMNLRKNL-FSGEVPKWIG 290 (936)
Q Consensus 217 ~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~ 290 (936)
+..++ +|++|+|++| .++ +.++..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+.
T Consensus 190 ~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~ 269 (336)
T 2ast_B 190 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG 269 (336)
T ss_dssp HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGG
T ss_pred HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHh
Confidence 66666 7777777777 333 3344555566666666666666 554555555555555555555553 1111111344
Q ss_pred cCCccceecccCc
Q 002321 291 ELESLETLDLSGN 303 (936)
Q Consensus 291 ~l~~L~~L~L~~N 303 (936)
.+++|+.|++++|
T Consensus 270 ~~~~L~~L~l~~~ 282 (336)
T 2ast_B 270 EIPTLKTLQVFGI 282 (336)
T ss_dssp GCTTCCEEECTTS
T ss_pred cCCCCCEEeccCc
Confidence 4555555555555
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1.6e-25 Score=249.39 Aligned_cols=130 Identities=16% Similarity=0.177 Sum_probs=74.3
Q ss_pred EEecCCCCCCCCCccCccCCCCcceeecccccccccCC----ccccccc-CcceeeccccccCCCCchhhhcc-----cc
Q 002321 201 TLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIP----DGIGSCS-LLRTIDFSENSFSGNLPETMQKL-----SL 270 (936)
Q Consensus 201 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~~~~l~~l-----~~ 270 (936)
+++|++|.+++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 45677777777777666665667777777777775555 5566666 67777777777766666555554 55
Q ss_pred ccEEeccCccccCCCCcccccC-----CccceecccCceeccccCccccc-----ccccceEEccCCccc
Q 002321 271 CNFMNLRKNLFSGEVPKWIGEL-----ESLETLDLSGNKFSGAVPISIGN-----LQRLKVLNFSANRLT 330 (936)
Q Consensus 271 L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~l~~-----l~~L~~L~L~~N~l~ 330 (936)
|+.|+|++|.+++..+..+... ++|++|+|++|++++..+..+.. .++|++|+|++|+++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 5555555555554444433222 45555555555554433322221 134444444444444
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=3.5e-24 Score=223.83 Aligned_cols=178 Identities=15% Similarity=0.175 Sum_probs=130.4
Q ss_pred cccEEeccCCcccCcCCCchhhcCCCcEEEccCcc-cccccchhhhhcCCCCcEEEccC-ccCCCCCCCCcccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNS-LSGSIPDEFFKQCGSLRVISLAK-NRFSGKIPSSLSLCSTLATI 178 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~i~~~~f~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 178 (936)
+|++|+|++|+|+++.+..|.++++|++|+|++|+ ++ .++...|.++++|++|+|++ |+|++..+..|..+++|++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 78899999999987777788899999999999997 77 67877888888888888888 88887777788888888888
Q ss_pred ccccccccCCCCCCCCCCCCCC---EEecCCC-CCCCCCccCccCCCCcc-eeecccccccccCCcccccccCcceeecc
Q 002321 179 NLSSNRFSSPLPLGIWGLSALR---TLDLSDN-LLEGEIPKGVESLKNLR-VINLSKNMFSGSIPDGIGSCSLLRTIDFS 253 (936)
Q Consensus 179 ~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 253 (936)
+|++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++...+..|.. ++|++|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 888888886 454 77777777 7888877 77765556677777777 7777777777333333433 667777777
Q ss_pred ccc-cCCCCchhhhcc-ccccEEeccCcccc
Q 002321 254 ENS-FSGNLPETMQKL-SLCNFMNLRKNLFS 282 (936)
Q Consensus 254 ~N~-l~~~~~~~l~~l-~~L~~L~L~~N~l~ 282 (936)
+|+ +++..+..|..+ ++|+.|++++|+++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 763 664444445544 44555555544444
No 338
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=7.3e-24 Score=234.74 Aligned_cols=245 Identities=14% Similarity=0.112 Sum_probs=171.7
Q ss_pred CCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccc
Q 002321 62 TPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIP 141 (936)
Q Consensus 62 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~ 141 (936)
|-|.|..|.|+.. +++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|
T Consensus 7 C~C~~~~v~C~~~------------~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 7 CHCSNRVFLCQES------------KVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp SEEETTEEEEEST------------TCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred cEeeCCEEEecCC------------CCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 3478988999752 333 455544 3679999999999997666789999999999999999987889
Q ss_pred hhhhhcCCCCcE-EEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCC-CCCCCCCccCccC
Q 002321 142 DEFFKQCGSLRV-ISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSD-NLLEGEIPKGVES 219 (936)
Q Consensus 142 ~~~f~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~ 219 (936)
..+|.++++|++ +.+++|+|+...|..|..+++|++|++++|+|+...+..+....++..|++.+ |++....+..|..
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 999999988775 66777899988888899999999999999999887777777777888888865 5677555556666
Q ss_pred CC-CcceeecccccccccCCcccccccCcceeeccc-cccCCCCchhhhccccccEEeccCccccCCCCcccccCCccce
Q 002321 220 LK-NLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSE-NSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLET 297 (936)
Q Consensus 220 l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 297 (936)
+. .++.|+|++|+|+.+ |.......+|++|++++ |.++...++.|..+++|+.|+|++|+|+...+..+.++++|+.
T Consensus 152 ~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~ 230 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRA 230 (350)
T ss_dssp SBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEEC
T ss_pred cchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhh
Confidence 64 578888888888844 44444556788888764 5565444455666666666666666666444444444444444
Q ss_pred ecccCceeccccCcccccccccceEEccC
Q 002321 298 LDLSGNKFSGAVPISIGNLQRLKVLNFSA 326 (936)
Q Consensus 298 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 326 (936)
+++. .+. .+| .+.++++|+.+++.+
T Consensus 231 l~~~--~l~-~lP-~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 231 RSTY--NLK-KLP-TLEKLVALMEASLTY 255 (350)
T ss_dssp TTCT--TCC-CCC-CTTTCCSCCEEECSC
T ss_pred ccCC--CcC-cCC-CchhCcChhhCcCCC
Confidence 3332 222 233 244555555555544
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=4.1e-24 Score=232.65 Aligned_cols=226 Identities=19% Similarity=0.230 Sum_probs=187.3
Q ss_pred ccccEEeccCCcccCcCCC---chhhcCCCcEEEccCcccccccchhhh-hcCCCCcEEEccCccCCCCCC----CCccc
Q 002321 100 QFLRKLSLSSNNLTGSISP---NLAKLQNLRVIDLSGNSLSGSIPDEFF-KQCGSLRVISLAKNRFSGKIP----SSLSL 171 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~---~l~~l~~L~~L~Ls~N~l~~~i~~~~f-~~l~~L~~L~L~~N~l~~~~p----~~~~~ 171 (936)
..++.|.+.++.++...-. .+..+++|++|+|++|++++.+|..++ ..+++|++|+|++|++++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578888888887632111 233567899999999999988887766 889999999999999997655 33457
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCC--C--ccCccCCCCcceeecccccccccCCc----cccc
Q 002321 172 CSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGE--I--PKGVESLKNLRVINLSKNMFSGSIPD----GIGS 243 (936)
Q Consensus 172 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~ 243 (936)
+++|++|+|++|++++..+..|.++++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 89999999999999998889999999999999999998752 2 2334789999999999999973 333 3578
Q ss_pred ccCcceeeccccccCCCCchhhhcc---ccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccc
Q 002321 244 CSLLRTIDFSENSFSGNLPETMQKL---SLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLK 320 (936)
Q Consensus 244 l~~L~~L~Ls~N~l~~~~~~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 320 (936)
+++|++|+|++|++++..|..+..+ ++|+.|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8999999999999999888877776 69999999999999 5677664 7999999999999964 43 67889999
Q ss_pred eEEccCCcccc
Q 002321 321 VLNFSANRLTG 331 (936)
Q Consensus 321 ~L~L~~N~l~~ 331 (936)
.|+|++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999974
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.3e-25 Score=246.87 Aligned_cols=256 Identities=17% Similarity=0.175 Sum_probs=127.1
Q ss_pred ccCCCCCCcccccccccCccccEEeccCCcccCcCC----CchhhcC-CCcEEEccCcccccccchhhhhcC-----CCC
Q 002321 82 TLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSIS----PNLAKLQ-NLRVIDLSGNSLSGSIPDEFFKQC-----GSL 151 (936)
Q Consensus 82 ~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~----~~l~~l~-~L~~L~Ls~N~l~~~i~~~~f~~l-----~~L 151 (936)
+++.++++|.+|..+...++|++|+|++|+|++..+ ..|.+++ +|++|+|++|+|++..+ ..|..+ ++|
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~-~~l~~~l~~~~~~L 82 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNS-DELVQILAAIPANV 82 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCH-HHHHHHHHTSCTTC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHH-HHHHHHHhccCCCc
Confidence 455555665555555555556666666666655444 4455555 56666666666653222 222332 555
Q ss_pred cEEEccCccCCCCCCCCcccc-----ccccccccccccccCCCCCCCC----C-CCCCCEEecCCCCCCCCCccCccCCC
Q 002321 152 RVISLAKNRFSGKIPSSLSLC-----STLATINLSSNRFSSPLPLGIW----G-LSALRTLDLSDNLLEGEIPKGVESLK 221 (936)
Q Consensus 152 ~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~~~~~~~l~ 221 (936)
++|+|++|+|++..+..++.. ++|++|+|++|+|++..+..+. . .++|++|+|++|.+++..+..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l---- 158 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL---- 158 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH----
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH----
Confidence 555555555554444433322 4555555555555544332221 2 1345555555555543222111
Q ss_pred CcceeecccccccccCCccccccc-CcceeeccccccCCCCchhhhc----c-ccccEEeccCccccCC----CCccccc
Q 002321 222 NLRVINLSKNMFSGSIPDGIGSCS-LLRTIDFSENSFSGNLPETMQK----L-SLCNFMNLRKNLFSGE----VPKWIGE 291 (936)
Q Consensus 222 ~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~~l~~----l-~~L~~L~L~~N~l~~~----~~~~~~~ 291 (936)
+..+..++ +|++|+|++|++++..+..+.. . ++|+.|+|++|.+++. ++..+..
T Consensus 159 ----------------~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 159 ----------------IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp ----------------HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred ----------------HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 11122222 4555555555554444433222 2 3555555555555432 2233333
Q ss_pred -CCccceecccCceeccccC----cccccccccceEEccCCcccccC-------ChhhhccCCCCEEEccCCcCccCCC
Q 002321 292 -LESLETLDLSGNKFSGAVP----ISIGNLQRLKVLNFSANRLTGSL-------PDSMANCMNLVALDFSQNSMNGDLP 358 (936)
Q Consensus 292 -l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N~l~~~~-------~~~~~~l~~L~~L~Ls~N~l~~~~p 358 (936)
.++|++|+|++|++++..+ ..+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|++.+..+
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 2366666666666654333 22345566777777777644322 2345566677777777777765433
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=7.4e-24 Score=221.36 Aligned_cols=179 Identities=15% Similarity=0.183 Sum_probs=135.5
Q ss_pred CCCcEEEccCcccccccchhhhhcCCCCcEEEccCcc-CCCCCCCCcccccccccccccc-ccccCCCCCCCCCCCCCCE
Q 002321 124 QNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNR-FSGKIPSSLSLCSTLATINLSS-NRFSSPLPLGIWGLSALRT 201 (936)
Q Consensus 124 ~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~ 201 (936)
++|++|+|++|+|+ .+|...|..+++|++|+|++|+ +++..+..|..+++|++|+|++ |+|+++.+..|.++++|++
T Consensus 31 ~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 38999999999999 6888889999999999999997 8877777899999999999998 9999877788889999999
Q ss_pred EecCCCCCCCCCccCccCCCCcc---eeecccc-cccccCCcccccccCcc-eeeccccccCCCCchhhhccccccEEec
Q 002321 202 LDLSDNLLEGEIPKGVESLKNLR---VINLSKN-MFSGSIPDGIGSCSLLR-TIDFSENSFSGNLPETMQKLSLCNFMNL 276 (936)
Q Consensus 202 L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 276 (936)
|+|++|++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++...+..|.. ++|+.|+|
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L 186 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYL 186 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEEC
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEc
Confidence 9999999885 565 77777777 8888888 88877677788888888 8888888877333333333 45555555
Q ss_pred cCcc-ccCCCCcccccC-CccceecccCceec
Q 002321 277 RKNL-FSGEVPKWIGEL-ESLETLDLSGNKFS 306 (936)
Q Consensus 277 ~~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~ 306 (936)
++|+ +++..+..|..+ ++|+.|++++|+++
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 5552 544444444444 45555555555544
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=6.9e-26 Score=255.05 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=134.0
Q ss_pred cccccccCccccEEeccCCcccCcCC----CchhhcCCCcEEEccCc---ccccccchhh------hhcCCCCcEEEccC
Q 002321 92 IGRGLLQLQFLRKLSLSSNNLTGSIS----PNLAKLQNLRVIDLSGN---SLSGSIPDEF------FKQCGSLRVISLAK 158 (936)
Q Consensus 92 ~~~~l~~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~Ls~N---~l~~~i~~~~------f~~l~~L~~L~L~~ 158 (936)
++..+..+++|++|+|++|+|++..+ ..|..+++|++|+|++| ++++.+|..+ |..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44556667777777777777765433 33556777777777774 4444455443 35666667777776
Q ss_pred ccCCC----CCCCCccccccccccccccccccCCCCCCCCC----C---------CCCCEEecCCCCCC-CCCc---cCc
Q 002321 159 NRFSG----KIPSSLSLCSTLATINLSSNRFSSPLPLGIWG----L---------SALRTLDLSDNLLE-GEIP---KGV 217 (936)
Q Consensus 159 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~~L~L~~N~l~-~~~~---~~~ 217 (936)
|+|++ .+|..+..+++|++|+|++|.|++..+..+.. + ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 66665 24445556666666666666665333222222 2 55555555555554 2222 234
Q ss_pred cCCCCcceeecccccccc-----cCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccC
Q 002321 218 ESLKNLRVINLSKNMFSG-----SIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGEL 292 (936)
Q Consensus 218 ~~l~~L~~L~L~~N~l~~-----~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 292 (936)
..+++|++|+|++|+++. ..+..+..+++|++|+|++|.++... ...+|..+..+
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g--------------------~~~l~~~l~~~ 243 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG--------------------SSALAIALKSW 243 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH--------------------HHHHHHHGGGC
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH--------------------HHHHHHHHccC
Confidence 445555555555555541 22224444455555555555443000 03344455555
Q ss_pred CccceecccCceeccc----cCccc--ccccccceEEccCCcccc----cCChhh-hccCCCCEEEccCCcCccCCC
Q 002321 293 ESLETLDLSGNKFSGA----VPISI--GNLQRLKVLNFSANRLTG----SLPDSM-ANCMNLVALDFSQNSMNGDLP 358 (936)
Q Consensus 293 ~~L~~L~L~~N~l~~~----~~~~l--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~~p 358 (936)
++|++|+|++|++++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..+
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 5666666666665543 23333 225666666666666665 355555 446666666666666665543
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=3e-25 Score=249.86 Aligned_cols=245 Identities=20% Similarity=0.275 Sum_probs=161.5
Q ss_pred CcccccCCccceecccCceeccccC----cccccccccceEEccCC---cccccCChhh-------hccCCCCEEEccCC
Q 002321 286 PKWIGELESLETLDLSGNKFSGAVP----ISIGNLQRLKVLNFSAN---RLTGSLPDSM-------ANCMNLVALDFSQN 351 (936)
Q Consensus 286 ~~~~~~l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N---~l~~~~~~~~-------~~l~~L~~L~Ls~N 351 (936)
+..+..+++|++|+|++|++++..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|+.|+|++|
T Consensus 25 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n 104 (386)
T 2ca6_A 25 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 104 (386)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCC
Confidence 3444455555556666665554322 22445566666666653 3333444433 45666666666666
Q ss_pred cCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcc----c---------ccC
Q 002321 352 SMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGA----L---------SGL 418 (936)
Q Consensus 352 ~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~----l---------~~L 418 (936)
.+.+..... ++..+..+++|++|+|++|.+++..+..+.. + ++|
T Consensus 105 ~l~~~~~~~-----------------------l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L 161 (386)
T 2ca6_A 105 AFGPTAQEP-----------------------LIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPL 161 (386)
T ss_dssp CCCTTTHHH-----------------------HHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cCCHHHHHH-----------------------HHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCC
Confidence 665321100 1111223556677777777665433333332 3 778
Q ss_pred CeeeccCcccc-CCCC---ccccCcccCCeeecCCcccc--c---cCCCCCCCcCCCcEEEecCCccC----CcCccccc
Q 002321 419 QLLNLSRNSLV-GPIP---VAIGDLKALNVLDLSENWLN--G---SIPPEIGGAYSLKELRLERNFLA----GKIPTSIE 485 (936)
Q Consensus 419 ~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~l~ 485 (936)
++|+|++|+++ +.++ ..+..+++|++|+|++|+++ | ..|..+..+++|+.|+|++|.++ +.+|..+.
T Consensus 162 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~ 241 (386)
T 2ca6_A 162 RSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK 241 (386)
T ss_dssp CEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGG
T ss_pred cEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHc
Confidence 88888888876 3334 35667778888888888887 2 34557788888999999999886 56788888
Q ss_pred cccccccccccCccccCC----Ccccc--cccCCccEEEcCCCcccC----CCCccc-ccccccCeeecCCCcccccCC
Q 002321 486 NCSSLVSLILSKNNLTGP----IPIAI--AKLTNLQNVDLSFNSLTG----GLPKQL-VNLVHLSSFNISHNHLQGELP 553 (936)
Q Consensus 486 ~l~~L~~L~L~~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~l-~~l~~L~~L~ls~N~l~~~~p 553 (936)
.+++|++|+|++|++++. ++..+ +++++|++|+|++|++++ .+|..+ .++++|+.|++++|++++..|
T Consensus 242 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 242 SWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp GCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 899999999999998865 45666 348999999999999986 488777 668999999999999886543
No 344
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=5.4e-23 Score=209.83 Aligned_cols=186 Identities=23% Similarity=0.295 Sum_probs=144.0
Q ss_pred CCCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCccccccc
Q 002321 61 DTPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSI 140 (936)
Q Consensus 61 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i 140 (936)
.|.|.|.+|.|+.. .+ + .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|+|+ .+
T Consensus 4 ~C~C~~~~v~c~~~--~l----------~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~ 67 (208)
T 2o6s_A 4 RCSCSGTTVECYSQ--GR----------T-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SL 67 (208)
T ss_dssp TCEEETTEEECCSS--CC----------S-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CC
T ss_pred CCEECCCEEEecCC--Cc----------c-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-cc
Confidence 34689999999753 11 1 233332 357899999999999777777889999999999999998 67
Q ss_pred chhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCC
Q 002321 141 PDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESL 220 (936)
Q Consensus 141 ~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 220 (936)
|...|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..+..+
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 147 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 147 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccC
Confidence 87888888889999998888887777777888888888888888887777777888888888888888886666667778
Q ss_pred CCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccc
Q 002321 221 KNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLS 269 (936)
Q Consensus 221 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 269 (936)
++|++|+|++|.+.+ .+++|++|+++.|+++|.+|..++.++
T Consensus 148 ~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 148 TSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred CCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 888888888887653 345677777777777777776665544
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=4.1e-23 Score=224.16 Aligned_cols=193 Identities=22% Similarity=0.358 Sum_probs=80.9
Q ss_pred hhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCC
Q 002321 121 AKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALR 200 (936)
Q Consensus 121 ~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 200 (936)
..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. ..+..+++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHcCCcCEEEeeCCCcc-Cch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 34444444444444444 222 13344444444444444443222 44444444444444444432 1344444555
Q ss_pred EEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCcc
Q 002321 201 TLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNL 280 (936)
Q Consensus 201 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 280 (936)
+|+|++|++++. +. +..+++|++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|.
T Consensus 111 ~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 555555554432 21 4444455555555554443222 4444445555554444443221 3333334444444443
Q ss_pred ccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCccc
Q 002321 281 FSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLT 330 (936)
Q Consensus 281 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 330 (936)
+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|+++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 332221 3344444444444444443221 334444444444444443
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.1e-22 Score=220.72 Aligned_cols=195 Identities=22% Similarity=0.317 Sum_probs=169.9
Q ss_pred cccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccc
Q 002321 96 LLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTL 175 (936)
Q Consensus 96 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 175 (936)
..++++|++|++++|+++. ++ .+..+++|++|+|++|+++ .++. |..+++|++|+|++|++++. ..+..+++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~-~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L 109 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQIT-DLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSI 109 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCC-CChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCC
Confidence 4578899999999999985 34 6899999999999999998 4555 89999999999999999864 368899999
Q ss_pred cccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccc
Q 002321 176 ATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSEN 255 (936)
Q Consensus 176 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 255 (936)
++|+|++|++++.. .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++..+ +..+++|++|++++|
T Consensus 110 ~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 110 KTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDN 183 (308)
T ss_dssp CEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCC
Confidence 99999999999753 38899999999999999996544 8899999999999999986544 889999999999999
Q ss_pred ccCCCCchhhhccccccEEeccCccccCCCCcccccCCccceecccCceecc
Q 002321 256 SFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSG 307 (936)
Q Consensus 256 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 307 (936)
++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 184 ~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 184 KISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred ccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 9987654 8899999999999999997653 8899999999999999984
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=1.4e-23 Score=244.08 Aligned_cols=208 Identities=24% Similarity=0.387 Sum_probs=148.4
Q ss_pred CCCCCCCCCCCc-----cceeE-EecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCC
Q 002321 53 LSSWSEDDDTPC-----NWFGV-KCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNL 126 (936)
Q Consensus 53 l~sW~~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 126 (936)
+.+|..+.+ +| .|.|+ .|.. ++++.|+|+++++++ +|+.+. ++|++|+|++|+|+ .+| ..+++|
T Consensus 33 l~~W~~~~~-~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 33 WDKWEKQAL-PGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHTTCC-TTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHhccCC-ccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 455765544 67 79999 7864 578899999999887 777663 78999999999988 456 457888
Q ss_pred cEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCC
Q 002321 127 RVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSD 206 (936)
Q Consensus 127 ~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 206 (936)
++|+|++|+|++ +|. |.. +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++
T Consensus 103 ~~L~Ls~N~l~~-ip~--l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE--LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRN 169 (571)
T ss_dssp CEEECCSSCCSC-CCC--CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CEEEccCCCCCC-cch--hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCC
Confidence 999999998885 776 333 88888888888886 555 56788888888888886 444 567888888888
Q ss_pred CCCCCCCccCccCCCCcceeecccccccccCCcccccccCc-------ceeeccccccCCCCchhhhccccccEEeccCc
Q 002321 207 NLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLL-------RTIDFSENSFSGNLPETMQKLSLCNFMNLRKN 279 (936)
Q Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-------~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 279 (936)
|+|++ +|. |. ++|++|+|++|+|+ .+|. |.. +| ++|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 170 N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N 240 (571)
T 3cvr_A 170 NQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDN 240 (571)
T ss_dssp SCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSS
T ss_pred CCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCC
Confidence 88885 555 55 77888888888887 5555 443 55 77777777776 34555555666666666666
Q ss_pred cccCCCCcccccC
Q 002321 280 LFSGEVPKWIGEL 292 (936)
Q Consensus 280 ~l~~~~~~~~~~l 292 (936)
.+++.+|..+..+
T Consensus 241 ~l~~~~p~~l~~l 253 (571)
T 3cvr_A 241 PLSSRIRESLSQQ 253 (571)
T ss_dssp SCCHHHHHHHHHH
T ss_pred cCCCcCHHHHHHh
Confidence 6665555555443
No 348
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.4e-22 Score=210.32 Aligned_cols=179 Identities=18% Similarity=0.230 Sum_probs=112.7
Q ss_pred cccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINL 180 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 180 (936)
..+++++++++++ .+|..+. ++|+.|+|++|+++ .++...|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLA-TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcC-ccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 4566777777776 3555444 46777777777776 455555666677777777777776666666666666666666
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCC
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGN 260 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (936)
++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 66666666556666666666666666666655555556666666666666666655555566666666666666666655
Q ss_pred CchhhhccccccEEeccCccccC
Q 002321 261 LPETMQKLSLCNFMNLRKNLFSG 283 (936)
Q Consensus 261 ~~~~l~~l~~L~~L~L~~N~l~~ 283 (936)
.+..|..+++|+.|+|++|.+++
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCT
T ss_pred CHHHHhCCCCCCEEEeeCCceeC
Confidence 55555555555555555555543
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1e-22 Score=225.58 Aligned_cols=241 Identities=15% Similarity=0.118 Sum_probs=194.6
Q ss_pred cEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCC-CCccccccccc-ccc
Q 002321 103 RKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIP-SSLSLCSTLAT-INL 180 (936)
Q Consensus 103 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L 180 (936)
+.++.++++++ .+|..+ .+++++|+|++|+|+ .||.++|.++++|++|+|++|+|.+.+| ..|.++++|++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 46788899998 577766 368999999999999 8999999999999999999999976555 57889988775 677
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeeccc-ccccccCCccccccc-CcceeeccccccC
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSK-NMFSGSIPDGIGSCS-LLRTIDFSENSFS 258 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~ 258 (936)
++|+|+.+.|..|.++++|++|++++|+|+...+..+....++..|++.+ |+++...+..|..+. .+++|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 78999999899999999999999999999977777777788899999965 678866667777765 6899999999999
Q ss_pred CCCchhhhccccccEEeccC-ccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhh
Q 002321 259 GNLPETMQKLSLCNFMNLRK-NLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSM 337 (936)
Q Consensus 259 ~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 337 (936)
...+..| ...+|+.|++.+ |.++...++.|..+++|++|||++|+|+...+..+.++++|+.+++ +.++ .+| .+
T Consensus 168 ~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l 242 (350)
T 4ay9_X 168 EIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TL 242 (350)
T ss_dssp EECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CT
T ss_pred CCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-Cc
Confidence 6544444 556899999975 6777666678899999999999999999655555555554444433 3344 555 47
Q ss_pred hccCCCCEEEccCCc
Q 002321 338 ANCMNLVALDFSQNS 352 (936)
Q Consensus 338 ~~l~~L~~L~Ls~N~ 352 (936)
..+++|+.++++++.
T Consensus 243 ~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 243 EKLVALMEASLTYPS 257 (350)
T ss_dssp TTCCSCCEEECSCHH
T ss_pred hhCcChhhCcCCCCc
Confidence 889999999997654
No 350
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=9.3e-24 Score=232.94 Aligned_cols=250 Identities=18% Similarity=0.225 Sum_probs=141.3
Q ss_pred cceeeccccccCCCCchhhhcc--ccccEEeccCccccCCCCcccccCCccceecccCceeccc-cCcccccccccceEE
Q 002321 247 LRTIDFSENSFSGNLPETMQKL--SLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGA-VPISIGNLQRLKVLN 323 (936)
Q Consensus 247 L~~L~Ls~N~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~ 323 (936)
++.+++++|.+. +..+..+ +.++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 455566655554 3444444 4555555555555544443 33456666666666666543 455555566666666
Q ss_pred ccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcc
Q 002321 324 FSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNE 403 (936)
Q Consensus 324 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 403 (936)
|++|.+++..+..+..+++|+.|++++|. .
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~--------------------------------------------------~ 154 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCS--------------------------------------------------G 154 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCB--------------------------------------------------S
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCC--------------------------------------------------C
Confidence 66666655555555555555555555551 2
Q ss_pred cCCC-ChhhhcccccCCeeeccCc-cccCC-CCccccCcc-cCCeeecCCc--ccc-ccCCCCCCCcCCCcEEEecCCc-
Q 002321 404 FSGE-TPATIGALSGLQLLNLSRN-SLVGP-IPVAIGDLK-ALNVLDLSEN--WLN-GSIPPEIGGAYSLKELRLERNF- 475 (936)
Q Consensus 404 l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~- 475 (936)
+++. .+..+..+++|++|+|++| .+++. ++..+..++ +|++|+|++| .++ +.+|..+..+++|+.|+|++|.
T Consensus 155 l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 155 FSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp CCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred CCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 3221 2333444444444444444 44322 233444445 5555555555 233 2344445566677777777776
Q ss_pred cCCcCccccccccccccccccCcc-ccCCCcccccccCCccEEEcCCCcccCCCCcccccc-cccCeeecCCCcccccCC
Q 002321 476 LAGKIPTSIENCSSLVSLILSKNN-LTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNL-VHLSSFNISHNHLQGELP 553 (936)
Q Consensus 476 l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~ls~N~l~~~~p 553 (936)
+++..+..+..+++|++|+|++|. +.......+.++++|++|+|++| ++ ...+..+ .+|+.|++++|++++..|
T Consensus 235 l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 235 LKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTC
T ss_pred CCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccC
Confidence 555666677777778888887774 22222225777888888888888 33 2234444 347777888888888777
Q ss_pred C
Q 002321 554 A 554 (936)
Q Consensus 554 ~ 554 (936)
.
T Consensus 311 ~ 311 (336)
T 2ast_B 311 P 311 (336)
T ss_dssp S
T ss_pred C
Confidence 5
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.2e-22 Score=214.72 Aligned_cols=144 Identities=15% Similarity=0.120 Sum_probs=116.2
Q ss_pred cccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-----------------chHHHHHHHHHHHHcCCCCCcceee
Q 002321 691 LLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-----------------KSQEDFEREVKKLGKVRHPNLVTLE 753 (936)
Q Consensus 691 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~h~niv~l~ 753 (936)
.|...+.||+|+||.||+|++.+|+.||||+++..... .....+.+|+.++++++ | +++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 34455789999999999999977999999999643211 13467899999999999 5 6777
Q ss_pred eEEEeCCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCCCeEEee
Q 002321 754 GYYWTQSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGD 833 (936)
Q Consensus 754 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (936)
+++.. +..++||||++||+|.+ +.. .+...++.|+++||+|||+.||+||||||+|||++ ++.+||+|
T Consensus 168 ~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 168 KVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp CEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred eEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 76543 45699999999999998 432 12346999999999999999999999999999999 99999999
Q ss_pred ccCccccCCCccccccccccCcccccCcccc
Q 002321 834 YGLARLLPMLDRYVLSSKIQSALGYMAPEFA 864 (936)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 864 (936)
||+|+.. ..|+|||++
T Consensus 236 FG~a~~~---------------~~~~a~e~l 251 (282)
T 1zar_A 236 FPQSVEV---------------GEEGWREIL 251 (282)
T ss_dssp CTTCEET---------------TSTTHHHHH
T ss_pred CCCCeEC---------------CCCCHHHHH
Confidence 9999743 236888877
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.3e-21 Score=197.77 Aligned_cols=178 Identities=21% Similarity=0.237 Sum_probs=119.9
Q ss_pred cEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccccc
Q 002321 103 RKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSS 182 (936)
Q Consensus 103 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 182 (936)
+.++.+++.++. +|..+ .++|++|+|++|+++ .++...|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 456677777773 44444 357888888888887 56777777888888888888888766666677777777777777
Q ss_pred ccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCc
Q 002321 183 NRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLP 262 (936)
Q Consensus 183 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 262 (936)
|+|++..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|++++..+..|..+++|++|+|++|.+.+.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-- 163 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-- 163 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC--
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC--
Confidence 777766666677777777777777777766555667777777777777777765555566677777777777665532
Q ss_pred hhhhccccccEEeccCccccCCCCccccc
Q 002321 263 ETMQKLSLCNFMNLRKNLFSGEVPKWIGE 291 (936)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 291 (936)
++.|++|++..|.++|.+|.+++.
T Consensus 164 -----~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 164 -----CPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp -----TTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred -----CCCHHHHHHHHHhCCceeeccCcc
Confidence 223444444444444444444443
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=5.2e-21 Score=222.58 Aligned_cols=196 Identities=22% Similarity=0.363 Sum_probs=117.2
Q ss_pred cccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINL 180 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 180 (936)
+|+.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 67777777777765 55544 256777777777776 566 235666666666666665 444 443 6666666
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCC
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGN 260 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (936)
++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~ 194 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-S 194 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-S
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-c
Confidence 6666665 333 45666666666666664 443 34566666666666664 444 43 56666666666655 2
Q ss_pred CchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhcc
Q 002321 261 LPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANC 340 (936)
Q Consensus 261 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 340 (936)
+|. +.. +| +...+.|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+
T Consensus 195 lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 195 LPA-VPV--RN-----------------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCC-CC---------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred hhh-HHH--hh-----------------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 222 221 11 001122377777777777 466666667778888888888777777777665
Q ss_pred CC
Q 002321 341 MN 342 (936)
Q Consensus 341 ~~ 342 (936)
..
T Consensus 254 ~~ 255 (571)
T 3cvr_A 254 TA 255 (571)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=4.3e-22 Score=240.66 Aligned_cols=237 Identities=19% Similarity=0.212 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHhccCC-CCCCCCCCCCCCCCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCc
Q 002321 33 NDDVLGLIVFKADIQDP-NGKLSSWSEDDDTPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNN 111 (936)
Q Consensus 33 ~~~~~aLl~~k~~~~d~-~~~l~sW~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~ 111 (936)
..++++|+++..+...+ ...-.+|......++.|.++.++. .+++.|+|.++++.. ++. ..|+.++|+.|.
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~ 202 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYS 202 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chh-----hHhhcCccCccc
Confidence 46899999999877522 333456755444357899998876 789999998888765 232 335566666666
Q ss_pred ccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCC
Q 002321 112 LTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPL 191 (936)
Q Consensus 112 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (936)
|++ ++++.|++. ++.+.|..+++|+.|+|++|+|. .+|..+..+++|++|+|++|+|+ .+|.
T Consensus 203 i~~--------------~~~~~n~~~--~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~ 264 (727)
T 4b8c_D 203 IDE--------------DDDIENRMV--MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPA 264 (727)
T ss_dssp -----------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCG
T ss_pred ccC--------------cccccccee--cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccCh
Confidence 553 344555554 45566677777777777777776 46666667778888888888877 5677
Q ss_pred CCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhcccc-
Q 002321 192 GIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSL- 270 (936)
Q Consensus 192 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~- 270 (936)
.|.++++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+..
T Consensus 265 ~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~ 342 (727)
T 4b8c_D 265 EIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVT 342 (727)
T ss_dssp GGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHH
T ss_pred hhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchh
Confidence 7778888888888888887 66777888888888888888886 66777888888888888888888777777765432
Q ss_pred ccEEeccCccccCCCCcccccCCccceecccCc
Q 002321 271 CNFMNLRKNLFSGEVPKWIGELESLETLDLSGN 303 (936)
Q Consensus 271 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 303 (936)
+..++|++|.+++.+|.. |+.|+++.|
T Consensus 343 ~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 343 GLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp HHHHHHHHCCCCCCCCCC---------------
T ss_pred hhHHhhccCcccCcCccc------cceeEeecc
Confidence 234667777777766653 445556655
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.7e-20 Score=194.13 Aligned_cols=161 Identities=23% Similarity=0.302 Sum_probs=104.7
Q ss_pred CCCCCCCCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcc
Q 002321 56 WSEDDDTPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNS 135 (936)
Q Consensus 56 W~~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~ 135 (936)
|..... .|.|.+|.|+.. ++ ..+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~~~-~Cs~~~v~c~~~--~l-----------~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 12 ACPSQC-SCSGTTVDCRSK--RH-----------ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCTTC-EEETTEEECTTS--CC-----------SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCCCC-EEeCCEeEccCC--Cc-----------CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 433333 799999999752 22 13444333 788888999988888888888888888888888888
Q ss_pred cccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCcc
Q 002321 136 LSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPK 215 (936)
Q Consensus 136 l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 215 (936)
|+ .+|...|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+.
T Consensus 76 l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 76 LG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 86 677777777777777777777777655555566666666666666655 3444555555555555555555544444
Q ss_pred CccCCCCcceeeccccccc
Q 002321 216 GVESLKNLRVINLSKNMFS 234 (936)
Q Consensus 216 ~~~~l~~L~~L~L~~N~l~ 234 (936)
.|..+++|++|+|++|.+.
T Consensus 154 ~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTTTCTTCCEEECTTSCBC
T ss_pred HHhCCCCCCEEEeeCCCcc
Confidence 4444555555555555444
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.7e-21 Score=197.63 Aligned_cols=180 Identities=21% Similarity=0.196 Sum_probs=151.1
Q ss_pred ccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCC-ccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEec
Q 002321 394 LQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIP-VAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLE 472 (936)
Q Consensus 394 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 472 (936)
-+.+++++|.++. +|..+. ..+++|+|++|++++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 3689999999985 555442 457899999999997754 568999999999999999998888899999999999999
Q ss_pred CCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccC
Q 002321 473 RNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGEL 552 (936)
Q Consensus 473 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 552 (936)
+|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|++.+.+
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888888999999999999999999988999999999999999999999888999999999999999999999988
Q ss_pred CCCCccCcCCCcc-ccCCCCCCCCCC
Q 002321 553 PAGGFFNTISPSS-VLGNPSLCGSAV 577 (936)
Q Consensus 553 p~~~~~~~~~~~~-~~gn~~~c~~~~ 577 (936)
+...+..++.... +.+|+ .|+.|.
T Consensus 170 ~l~~l~~~~~~~~~~~~~~-~C~~P~ 194 (220)
T 2v70_A 170 YLAWLGEWLRKKRIVTGNP-RCQKPY 194 (220)
T ss_dssp GGHHHHHHHHHSCCBCCCC-EEEESG
T ss_pred chHHHHHHHHhcCccccCC-ccCCCh
Confidence 7544433332222 23443 565553
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.3e-20 Score=202.56 Aligned_cols=189 Identities=20% Similarity=0.262 Sum_probs=108.1
Q ss_pred ccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccc
Q 002321 102 LRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLS 181 (936)
Q Consensus 102 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 181 (936)
+..+.+..+.+++. ..+..+++|++|++++|.++ .++. +..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 26 ~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 26 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHhcCCCcccc--cchhhcCcccEEEccCCCcc-cChh--HhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 34444555555433 23445666666666666665 3332 4556666666666666654333 5556666666666
Q ss_pred cccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCC
Q 002321 182 SNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNL 261 (936)
Q Consensus 182 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 261 (936)
+|++++. ..+..+++|++|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|++|+|++|++++..
T Consensus 99 ~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 99 ENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp SSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccch
Confidence 6666542 2356666666666666666642 3456666666666666666643 45566666666666666666543
Q ss_pred chhhhccccccEEeccCccccCCCCcccccCCccceecccCceecc
Q 002321 262 PETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSG 307 (936)
Q Consensus 262 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 307 (936)
+ +..+++|+.|+|++|.+++. + .+..+++|+.|++++|+++.
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred h--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 3 55555566666666655542 2 25556666666666666653
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=9.8e-21 Score=194.50 Aligned_cols=157 Identities=22% Similarity=0.223 Sum_probs=132.4
Q ss_pred cEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCC
Q 002321 395 QFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERN 474 (936)
Q Consensus 395 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 474 (936)
+.+++++|.++. +|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 578888888874 444433 67888999999988777778888899999999999998888888999999999999999
Q ss_pred ccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCC
Q 002321 475 FLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPA 554 (936)
Q Consensus 475 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 554 (936)
+|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++.+...-
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 99866666678899999999999999988888899999999999999999877777788899999999999998876554
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=5.3e-20 Score=189.01 Aligned_cols=132 Identities=26% Similarity=0.344 Sum_probs=67.3
Q ss_pred ccEEeccCCcccCcCC-CchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccc
Q 002321 102 LRKLSLSSNNLTGSIS-PNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINL 180 (936)
Q Consensus 102 L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 180 (936)
+++|+|++|+|++..+ ..|.++++|++|+|++|+|+ .++...|..+++| ++|+|
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L------------------------~~L~L 88 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGV------------------------NEILL 88 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC-EECTTTTTTCTTC------------------------CEEEC
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC-EECHHHhCCCCCC------------------------CEEEC
Confidence 4555555555554433 23555555555555555555 3444444444444 44444
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccC
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFS 258 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 258 (936)
++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 444444444444445555555555555555444455555555555555555555444555555555555555555554
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=4e-20 Score=217.71 Aligned_cols=191 Identities=19% Similarity=0.259 Sum_probs=111.3
Q ss_pred cccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINL 180 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 180 (936)
.+..+.++.+.+++.. .+..|++|+.|+|++|.|+ .++ .|..+++|+.|+|++|+|++..+ +..+++|++|+|
T Consensus 22 ~l~~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHhccCCCccccc--chhcCCCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 3444455555555432 2455556666666666555 333 24555566666666665554333 555666666666
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCC
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGN 260 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 260 (936)
++|+|++. ..+..+++|++|+|++|.|++. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++.
T Consensus 95 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 95 DENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred cCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 66666542 2456666666666666666642 3356666666666666666643 4566666666666666666655
Q ss_pred CchhhhccccccEEeccCccccCCCCcccccCCccceecccCceeccc
Q 002321 261 LPETMQKLSLCNFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGA 308 (936)
Q Consensus 261 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 308 (936)
.| +..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++.+.
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 44 56666666666666666643 2456666677777777766643
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=3.1e-20 Score=199.60 Aligned_cols=188 Identities=21% Similarity=0.271 Sum_probs=147.2
Q ss_pred EeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCc
Q 002321 80 ELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKN 159 (936)
Q Consensus 80 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N 159 (936)
.+.+.+..+++.. .+.++++|++|++++|++++. +.+..+++|++|+|++|++++ ++. |..+++|++|+|++|
T Consensus 28 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 28 KDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSS
T ss_pred HHHhcCCCccccc--chhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCC
Confidence 3344444444322 245788888888888888754 358888889999999888884 444 788888999999998
Q ss_pred cCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCc
Q 002321 160 RFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPD 239 (936)
Q Consensus 160 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 239 (936)
++++ +..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++..+
T Consensus 101 ~l~~--~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 101 KVKD--LSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp CCCC--GGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred cCCC--ChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 8885 23488888899999999988874 4678888899999999988865 568888899999999999886654
Q ss_pred ccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCC
Q 002321 240 GIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGE 284 (936)
Q Consensus 240 ~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 284 (936)
+..+++|++|+|++|.+++. + .+..+++|+.|++++|.++..
T Consensus 174 -l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred -hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 88888999999999988864 3 488888999999999988753
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=4.8e-22 Score=232.75 Aligned_cols=186 Identities=17% Similarity=0.190 Sum_probs=111.2
Q ss_pred ccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcc-------------cccccchhhhhcCCCCcEEE-ccCccCC
Q 002321 97 LQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNS-------------LSGSIPDEFFKQCGSLRVIS-LAKNRFS 162 (936)
Q Consensus 97 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-------------l~~~i~~~~f~~l~~L~~L~-L~~N~l~ 162 (936)
..+++|+.|+|++|+|+ .+|..+++|++|+.|++++|. +.+ .++..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~-~~~~~l~~l~~L~~L~~l~~n~~- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLL-YEKETLQYFSTLKAVDPMRAAYL- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGG-GHHHHHHHHHHHHHHCGGGHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhccccc-CCHHHHHHHHhcccCcchhhccc-
Confidence 56788889999999987 678889999999999987775 222 2233445555555555 444432
Q ss_pred CCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccc
Q 002321 163 GKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIG 242 (936)
Q Consensus 163 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 242 (936)
.+|+.+.+++|.|+...+ ..|+.|+|++|.|++ +|. ++++++|+.|+|++|+|+ .+|..|+
T Consensus 423 ----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 423 ----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 345555555566554322 136666666666664 444 666666666666666666 5566666
Q ss_pred cccCcceeeccccccCCCCchhhhccccccEEeccCccccCCC-CcccccCCccceecccCceec
Q 002321 243 SCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEV-PKWIGELESLETLDLSGNKFS 306 (936)
Q Consensus 243 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~ 306 (936)
.+++|++|+|++|+|++ +| .+..+++|+.|+|++|++++.. |..++.+++|+.|+|++|+++
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 66666666666666664 33 4455555555555555554443 444444444444444444444
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.4e-19 Score=212.98 Aligned_cols=198 Identities=21% Similarity=0.267 Sum_probs=156.6
Q ss_pred eEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEcc
Q 002321 78 VIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLA 157 (936)
Q Consensus 78 v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~ 157 (936)
+..+.+....++..++ +.+|++|+.|+|++|.|+.. +.|..+++|+.|+|++|+|++ +++ |..+++|++|+|+
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l--~~l~~l~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC--TTGGGCTTCCEEECTTSCCCC-CGG--GGGCTTCCEEECC
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC--hHHccCCCCCEEEeeCCCCCC-Chh--hccCCCCCEEECc
Confidence 4444555555554333 56788889999999988854 368889999999999999985 443 7889999999999
Q ss_pred CccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccC
Q 002321 158 KNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSI 237 (936)
Q Consensus 158 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (936)
+|+|++ +..+..+++|++|+|++|+|+++ ..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|+|++..
T Consensus 96 ~N~l~~--l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKD--LSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCC--CTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCC--ChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 999885 34788899999999999999874 4588889999999999999865 56888899999999999998766
Q ss_pred CcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccC
Q 002321 238 PDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGEL 292 (936)
Q Consensus 238 p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 292 (936)
| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.+.....+..+
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccE
Confidence 6 88899999999999999864 468888999999999999886544443333
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.5e-19 Score=185.59 Aligned_cols=156 Identities=24% Similarity=0.291 Sum_probs=79.4
Q ss_pred CCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccc
Q 002321 62 TPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIP 141 (936)
Q Consensus 62 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~ 141 (936)
|.|.|..|.|.. ++++ .+|..+. +.|++|+|++|+|+++.+..|..+++|++|+|++|+|+ .++
T Consensus 9 C~C~~~~v~c~~------------~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~-~~~ 72 (220)
T 2v9t_B 9 CTCSNNIVDCRG------------KGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELA 72 (220)
T ss_dssp SEEETTEEECTT------------SCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCC-EEC
T ss_pred CEECCCEEEcCC------------CCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCC-CcC
Confidence 347787777764 2232 2343332 45666666666666555556666666666666666665 343
Q ss_pred hhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCC
Q 002321 142 DEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLK 221 (936)
Q Consensus 142 ~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 221 (936)
+..|.++++|++|+|++|+|+...+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..++
T Consensus 73 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 73 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred HHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCC
Confidence 44455555555555555555543333444444444444444444444444444444444444444444433333344444
Q ss_pred Ccceeecccccc
Q 002321 222 NLRVINLSKNMF 233 (936)
Q Consensus 222 ~L~~L~L~~N~l 233 (936)
+|++|+|++|.+
T Consensus 153 ~L~~L~L~~N~~ 164 (220)
T 2v9t_B 153 AIQTMHLAQNPF 164 (220)
T ss_dssp TCCEEECCSSCE
T ss_pred CCCEEEeCCCCc
Confidence 444444444443
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=7.7e-20 Score=203.21 Aligned_cols=109 Identities=27% Similarity=0.244 Sum_probs=60.6
Q ss_pred cccEEeccCCcccCcCCCchh-hcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLA-KLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATIN 179 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 179 (936)
.++.|+|++|+|++..+..|. ++++|++|+|++|+|+ .++...|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC-ccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 356666666666655555555 6666666666666665 45555555555555555555555544444455555555555
Q ss_pred cccccccCCCCCCCCCCCCCCEEecCCCCCC
Q 002321 180 LSSNRFSSPLPLGIWGLSALRTLDLSDNLLE 210 (936)
Q Consensus 180 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 210 (936)
|++|+|+++.|..|.++++|++|+|++|+|+
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 5555555444444444444444444444444
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=5e-22 Score=232.58 Aligned_cols=188 Identities=21% Similarity=0.228 Sum_probs=92.0
Q ss_pred ccCCccceecccCceeccccCcccccccccceEEccCCc-------------ccccCChhhhccCCCCEEE-ccCCcCcc
Q 002321 290 GELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANR-------------LTGSLPDSMANCMNLVALD-FSQNSMNG 355 (936)
Q Consensus 290 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l~~ 355 (936)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 34555666666666665 555566666666666665543 3334455555555555554 3433321
Q ss_pred CCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCcc
Q 002321 356 DLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVA 435 (936)
Q Consensus 356 ~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 435 (936)
.|+.+.+++|.|+...+ ..|+.|+|++|+|++ +|.
T Consensus 424 -------------------------------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~- 458 (567)
T 1dce_A 424 -------------------------------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH- 458 (567)
T ss_dssp -------------------------------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-
T ss_pred -------------------------------------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-
Confidence 23333334444332111 124445555555443 333
Q ss_pred ccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCC-cccccccCCc
Q 002321 436 IGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPI-PIAIAKLTNL 514 (936)
Q Consensus 436 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L 514 (936)
|+.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +| .++++++|++|+|++|+|++.. |..++.+++|
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCC
Confidence 444555555555555554 344445555555555555555553 34 4555555555555555555443 5555555555
Q ss_pred cEEEcCCCcccCC
Q 002321 515 QNVDLSFNSLTGG 527 (936)
Q Consensus 515 ~~L~Ls~N~l~~~ 527 (936)
+.|+|++|+|++.
T Consensus 536 ~~L~L~~N~l~~~ 548 (567)
T 1dce_A 536 VLLNLQGNSLCQE 548 (567)
T ss_dssp CEEECTTSGGGGS
T ss_pred CEEEecCCcCCCC
Confidence 5555555555533
No 367
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9e-20 Score=202.65 Aligned_cols=163 Identities=25% Similarity=0.243 Sum_probs=111.4
Q ss_pred cEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhh-cCCCCcEEEccCccCCCCCCCCccccccccccccc
Q 002321 103 RKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFK-QCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLS 181 (936)
Q Consensus 103 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 181 (936)
+.+++++++|+. +|..+. +.++.|+|++|+|+ .++...|. .+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 578888888874 565553 35788888888887 56666666 77778888888887777666777777777777777
Q ss_pred cccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCccc---ccccCcceeeccccccC
Q 002321 182 SNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGI---GSCSLLRTIDFSENSFS 258 (936)
Q Consensus 182 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~ 258 (936)
+|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..| ..+++|++|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 777777666667777777777777777776666667777777777777777765433334 44666666666666666
Q ss_pred CCCchhhhccc
Q 002321 259 GNLPETMQKLS 269 (936)
Q Consensus 259 ~~~~~~l~~l~ 269 (936)
+..+..+..++
T Consensus 177 ~l~~~~~~~l~ 187 (361)
T 2xot_A 177 KLPLTDLQKLP 187 (361)
T ss_dssp CCCHHHHHHSC
T ss_pred ccCHHHhhhcc
Confidence 54444444444
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=3.9e-19 Score=183.79 Aligned_cols=158 Identities=24% Similarity=0.211 Sum_probs=131.9
Q ss_pred cccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEec
Q 002321 393 SLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLE 472 (936)
Q Consensus 393 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 472 (936)
+.+.++.++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 4567888888886 4444332 778899999999988888888889999999999999886666677888999999999
Q ss_pred CCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccC
Q 002321 473 RNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGEL 552 (936)
Q Consensus 473 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 552 (936)
+|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|+.|+|++|++.+.+
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 99998777777888999999999999998 67888889999999999999998666677888999999999999998877
Q ss_pred CC
Q 002321 553 PA 554 (936)
Q Consensus 553 p~ 554 (936)
+.
T Consensus 176 ~~ 177 (229)
T 3e6j_A 176 RD 177 (229)
T ss_dssp GG
T ss_pred ch
Confidence 63
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.8e-19 Score=190.50 Aligned_cols=169 Identities=20% Similarity=0.281 Sum_probs=92.8
Q ss_pred cCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccc
Q 002321 98 QLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLAT 177 (936)
Q Consensus 98 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 177 (936)
++..+..+++++|.+++.. .+..+++|++|++++|+|+ .++ .+..+++|++|+|++|+|++..+ +..+++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 4555666666666666432 5666777777777777666 444 35566666666666666664433 556666666
Q ss_pred cccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccccc
Q 002321 178 INLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSF 257 (936)
Q Consensus 178 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 257 (936)
|+|++|++++..+ +.. ++|++|+|++|++++. + .+..+++|++|+|++|++++. + .+..+++|++|+|++|++
T Consensus 90 L~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 90 LSVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp EECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred EECCCCccCCcCc--ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 6666666655322 222 5566666666666532 2 355555555555555555533 2 455555555555555555
Q ss_pred CCCCchhhhccccccEEeccCcccc
Q 002321 258 SGNLPETMQKLSLCNFMNLRKNLFS 282 (936)
Q Consensus 258 ~~~~~~~l~~l~~L~~L~L~~N~l~ 282 (936)
++. ..+..+++|+.|++++|.++
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred cch--HHhccCCCCCEEeCCCCccc
Confidence 533 33334444444444444433
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=4.3e-19 Score=187.56 Aligned_cols=171 Identities=19% Similarity=0.288 Sum_probs=146.5
Q ss_pred ceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEc
Q 002321 77 RVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISL 156 (936)
Q Consensus 77 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L 156 (936)
.++.+++.++.+++.. .+.++++|++|++++|+|+. ++ .+..+++|++|+|++|+|++ ++. |..+++|++|+|
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD-LSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG--GTTCSSCCEEEC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-Chh--hccCCCCCEEEC
Confidence 4566778888777433 58899999999999999985 44 79999999999999999994 555 899999999999
Q ss_pred cCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeeccccccccc
Q 002321 157 AKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGS 236 (936)
Q Consensus 157 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (936)
++|+|++. |. +.. ++|++|+|++|+|++. ..+..+++|++|+|++|+|++. + .+..+++|++|+|++|++++.
T Consensus 93 ~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 93 NRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCCc-Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 99999964 33 333 9999999999999975 3689999999999999999964 4 689999999999999999976
Q ss_pred CCcccccccCcceeeccccccCCCCch
Q 002321 237 IPDGIGSCSLLRTIDFSENSFSGNLPE 263 (936)
Q Consensus 237 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~ 263 (936)
..+..+++|++|++++|.+++....
T Consensus 166 --~~l~~l~~L~~L~l~~N~~~~~~~~ 190 (263)
T 1xeu_A 166 --GGLTRLKKVNWIDLTGQKCVNEPVK 190 (263)
T ss_dssp --TTSTTCCCCCEEEEEEEEEECCCEE
T ss_pred --HHhccCCCCCEEeCCCCcccCCccc
Confidence 7789999999999999999866433
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.6e-18 Score=174.89 Aligned_cols=154 Identities=18% Similarity=0.267 Sum_probs=135.5
Q ss_pred CCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcE
Q 002321 389 SSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKE 468 (936)
Q Consensus 389 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 468 (936)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..+..+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 35678999999999998 445 6889999999999999776 3458999999999999999999888899999999999
Q ss_pred EEecCCccCCcCccccccccccccccccCcc-ccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCc
Q 002321 469 LRLERNFLAGKIPTSIENCSSLVSLILSKNN-LTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNH 547 (936)
Q Consensus 469 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~ 547 (936)
|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|++|+|++|++++ ++ .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 9999999998889999999999999999998 55 556 78999999999999999985 44 78999999999999999
Q ss_pred ccc
Q 002321 548 LQG 550 (936)
Q Consensus 548 l~~ 550 (936)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=4.1e-19 Score=178.23 Aligned_cols=131 Identities=24% Similarity=0.270 Sum_probs=72.3
Q ss_pred cEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCc-cccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecC
Q 002321 395 QFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPV-AIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLER 473 (936)
Q Consensus 395 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 473 (936)
+.+++++|+++ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56667777664 33433322 566666666666544443 355556666666666666555555555555555555555
Q ss_pred CccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCC
Q 002321 474 NFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGL 528 (936)
Q Consensus 474 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 528 (936)
|+|++..|..|.++++|++|+|++|+|++..|..+..+++|++|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 5555555555555555555555555555555555555555555555555555443
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.9e-18 Score=174.34 Aligned_cols=132 Identities=17% Similarity=0.243 Sum_probs=68.8
Q ss_pred hhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCC
Q 002321 120 LAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSAL 199 (936)
Q Consensus 120 l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 199 (936)
.+.+++|++|++++|+|+ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..+..+..+++|
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred hhhcCCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 355555666666666555 444 2455555555555555443 22345555555555555555555445555555555
Q ss_pred CEEecCCCCCCCCCccCccCCCCcceeeccccc-ccccCCcccccccCcceeeccccccC
Q 002321 200 RTLDLSDNLLEGEIPKGVESLKNLRVINLSKNM-FSGSIPDGIGSCSLLRTIDFSENSFS 258 (936)
Q Consensus 200 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~ 258 (936)
++|+|++|++++..+..+..+++|++|+|++|+ ++ .+| .+..+++|++|++++|+++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc
Confidence 555555555554445555555555555555554 33 222 3444555555555555544
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.1e-18 Score=183.70 Aligned_cols=137 Identities=18% Similarity=0.228 Sum_probs=105.7
Q ss_pred ccCCCcccccCceEEEEEEe-CCCcE--EEEEEeeccCcc-----------------------chHHHHHHHHHHHHcCC
Q 002321 692 LNKDCELGRGGFGAVYRTVL-RDGRP--VAIKKLTVSSLV-----------------------KSQEDFEREVKKLGKVR 745 (936)
Q Consensus 692 ~~~~~~iG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 745 (936)
++..+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45667899999999999998 57888 999997543211 01236889999999998
Q ss_pred CCCc--ceeeeEEEeCCeeEEEEEecCC-C----ChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCcccCCCC
Q 002321 746 HPNL--VTLEGYYWTQSLQLLIYEFVSG-G----SLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLH-QSNIIHYNIK 817 (936)
Q Consensus 746 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH-~~~ivH~Dlk 817 (936)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.|++||| +.||+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCC
Confidence 8864 333332 245899999942 3 66665432 223456789999999999999 9999999999
Q ss_pred CCCEEEcCCCCeEEeeccCcccc
Q 002321 818 SSNVLIDGSGEPKVGDYGLARLL 840 (936)
Q Consensus 818 p~NIll~~~~~~kl~Dfg~a~~~ 840 (936)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=3.5e-18 Score=171.35 Aligned_cols=156 Identities=24% Similarity=0.289 Sum_probs=129.9
Q ss_pred CeeeccCccccCCCCccccCcccCCeeecCCccccccCCC-CCCCcCCCcEEEecCCccCCcCccccccccccccccccC
Q 002321 419 QLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPP-EIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSK 497 (936)
Q Consensus 419 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 497 (936)
+.+++++|+++ .+|..+.. +|++|+|++|+|++..+. .+..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78899999996 56765544 899999999999876654 488999999999999999988899999999999999999
Q ss_pred ccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeecCCCcccccCCCCCccCcCCCccccCCCCCCCCCC
Q 002321 498 NNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNTISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 498 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~~c~~~~ 577 (936)
|+|++..+..|..+++|++|+|++|+|++..|..+..+++|++|+|++|+++|.++...+...+....+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 99998888889999999999999999998888999999999999999999998887655444444445556666777665
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=1.1e-18 Score=210.96 Aligned_cols=188 Identities=26% Similarity=0.297 Sum_probs=94.2
Q ss_pred cCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCccc
Q 002321 325 SANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEF 404 (936)
Q Consensus 325 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 404 (936)
..|++. ..+..|..+..|+.|+|++|.+. .+|..+ ..+++|++|+|++|.|
T Consensus 209 ~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~---------------------------~~l~~L~~L~Ls~N~l 259 (727)
T 4b8c_D 209 IENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANI---------------------------FKYDFLTRLYLNGNSL 259 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGG---------------------------GGCCSCSCCBCTTSCC
T ss_pred ccccee-cChhhhccCCCCcEEECCCCCCC-CCChhh---------------------------cCCCCCCEEEeeCCcC
Confidence 334444 45666666777777777777665 333222 2356677777777777
Q ss_pred CCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCcccc
Q 002321 405 SGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSI 484 (936)
Q Consensus 405 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 484 (936)
+ .+|..|+.+++|++|+|++|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+
T Consensus 260 ~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 260 T-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp S-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred c-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 6 66666777777777777777777 56777777777777777777776 566667777777777777777777777666
Q ss_pred ccccc-cccccccCccccCCCcccccccCCccEEEcCCC--------cccCCCCcccccccccCeeecCCCcccc
Q 002321 485 ENCSS-LVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFN--------SLTGGLPKQLVNLVHLSSFNISHNHLQG 550 (936)
Q Consensus 485 ~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N--------~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 550 (936)
..+.. +..|+|++|.+++.+|.. |+.|++++| .|.+..+..+.++..+....+++|-+.+
T Consensus 337 ~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 337 TEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CCCG
T ss_pred hhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 55432 234667777777666643 344556555 2333333344444555555555555543
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=1.5e-18 Score=190.37 Aligned_cols=240 Identities=13% Similarity=0.075 Sum_probs=116.3
Q ss_pred cCccccEEeccCCcccCcCCCchhh-cCCCcEEEccCcccccc-cchhhhhcCCCCcEEEccCccCCCCCCCCccc----
Q 002321 98 QLQFLRKLSLSSNNLTGSISPNLAK-LQNLRVIDLSGNSLSGS-IPDEFFKQCGSLRVISLAKNRFSGKIPSSLSL---- 171 (936)
Q Consensus 98 ~l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~Ls~N~l~~~-i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~---- 171 (936)
.+.+|++|.++++ +....-..+.. +++|++|||++|+|+.. .+... ++.++.+.+..|.| .+..|.+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I---~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV---PAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE---CTTTTEEEETT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---cccccccccccccc---CHHHhcccccc
Confidence 3667788877753 22211223444 67788888888887610 11111 11134444444432 2334444
Q ss_pred ----cccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccc----cccCCccccc
Q 002321 172 ----CSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMF----SGSIPDGIGS 243 (936)
Q Consensus 172 ----l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l----~~~~p~~l~~ 243 (936)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.++...+..|.++.++..+.+..+.. .......|.+
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 55555555555 55555555555555555555555555544445555555555444443211 1111112222
Q ss_pred --------------------------------------------------ccCcceeeccccccCCCCchhhhccccccE
Q 002321 244 --------------------------------------------------CSLLRTIDFSENSFSGNLPETMQKLSLCNF 273 (936)
Q Consensus 244 --------------------------------------------------l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 273 (936)
+++|+.|+|++|+++...+..|.++++|+.
T Consensus 175 ~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 175 GEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp SCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred ccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCE
Confidence 344555555555554444444555555555
Q ss_pred EeccCccccCCCCcccccCCccc-eecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEE
Q 002321 274 MNLRKNLFSGEVPKWIGELESLE-TLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALD 347 (936)
Q Consensus 274 L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 347 (936)
++|.+| ++.+.+.+|.++.+|+ .+++.+ .++...+.+|.++++|+.|++++|.++...+..|.++++|+.++
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 555544 4434444455555555 555544 34434444455555555555555555544444555555555443
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=1.3e-17 Score=182.68 Aligned_cols=288 Identities=14% Similarity=0.110 Sum_probs=177.5
Q ss_pred hcCCCcEEEccCcccccccchhhhhc-CCCCcEEEccCccCC--CCCCCCccccccccccccccccccCCCCCCCCC---
Q 002321 122 KLQNLRVIDLSGNSLSGSIPDEFFKQ-CGSLRVISLAKNRFS--GKIPSSLSLCSTLATINLSSNRFSSPLPLGIWG--- 195 (936)
Q Consensus 122 ~l~~L~~L~Ls~N~l~~~i~~~~f~~-l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--- 195 (936)
.+.+|+.|.++++ +. ...-..+.. +++|++|||++|+|. ...+..+ +.+..+.+..|.| .+.+|.+
T Consensus 23 ~~~~l~~L~l~g~-i~-~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~ 94 (329)
T 3sb4_A 23 EANSITHLTLTGK-LN-AEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVN 94 (329)
T ss_dssp HHHHCSEEEEEEE-EC-HHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEET
T ss_pred hhCceeEEEEecc-cc-HHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhccccc
Confidence 4778999999865 22 111223344 888999999999998 3333333 2355566666643 3467777
Q ss_pred -----CCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccccc----CCCCchhhh
Q 002321 196 -----LSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSF----SGNLPETMQ 266 (936)
Q Consensus 196 -----l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l----~~~~~~~l~ 266 (936)
+++|+.|+|.+ .++.+.+..|.++++|+.|++++|.++.+.+.+|..+.++..+.+..+.. ......
T Consensus 95 ~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~--- 170 (329)
T 3sb4_A 95 GVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHF--- 170 (329)
T ss_dssp TEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTS---
T ss_pred ccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccc---
Confidence 89999999988 88866677888899999999999988877778888877777776665321 111122
Q ss_pred ccccccEEeccCccccCCCCcccccCCccc-eecccCce-eccccCcccccccccceEEccCCcccccCChhhhccCCCC
Q 002321 267 KLSLCNFMNLRKNLFSGEVPKWIGELESLE-TLDLSGNK-FSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLV 344 (936)
Q Consensus 267 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 344 (936)
.|.++.+|+ .+.+.... +.......-....+++.+.+.++-...........+++|+
T Consensus 171 ---------------------~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~ 229 (329)
T 3sb4_A 171 ---------------------AFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLV 229 (329)
T ss_dssp ---------------------CEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCC
T ss_pred ---------------------ccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCe
Confidence 222333333 22222111 0000000111234555555554422211111112366777
Q ss_pred EEEccCCcCccCCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCC-eeec
Q 002321 345 ALDFSQNSMNGDLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQ-LLNL 423 (936)
Q Consensus 345 ~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~L 423 (936)
.|+|++|+++ .+|... +..+++|+.|+|.+| ++.+.+.+|.++++|+ .+++
T Consensus 230 ~l~L~~n~i~-~I~~~a--------------------------F~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l 281 (329)
T 3sb4_A 230 SLDISKTNAT-TIPDFT--------------------------FAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLEL 281 (329)
T ss_dssp EEECTTBCCC-EECTTT--------------------------TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEE
T ss_pred EEECCCCCcc-eecHhh--------------------------hhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEE
Confidence 7777776665 333222 134667777777776 6666677778888887 8888
Q ss_pred cCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEe
Q 002321 424 SRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRL 471 (936)
Q Consensus 424 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 471 (936)
.+ +++.+.+.+|.++++|+.|+++.|.++...+..|.++++|+.|+.
T Consensus 282 ~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 282 PA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred cc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 77 666566678888888888888888887766777888888887763
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1.3e-16 Score=157.83 Aligned_cols=135 Identities=22% Similarity=0.325 Sum_probs=87.7
Q ss_pred CCCccceeEEecCCCCceEEeccCCCCCCcccccccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCccccccc
Q 002321 61 DTPCNWFGVKCSPRSNRVIELTLNGLSLTGRIGRGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSI 140 (936)
Q Consensus 61 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i 140 (936)
.|.|.|.+|.|+.. ++ + .+|..+ .++|++|++++|++++..+..|.++++|++|+|++|+|+ .+
T Consensus 4 ~C~C~~~~l~~~~~--~l----------~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~ 67 (177)
T 2o6r_A 4 RCSCSGTEIRCNSK--GL----------T-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SL 67 (177)
T ss_dssp TCEEETTEEECCSS--CC----------S-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CC
T ss_pred CCEeCCCEEEecCC--CC----------c-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-Ee
Confidence 34589999999752 22 1 233222 257788888888887766666777888888888888877 56
Q ss_pred chhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCC
Q 002321 141 PDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEG 211 (936)
Q Consensus 141 ~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (936)
|...|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+..+++|++|+|++|.+++
T Consensus 68 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 68 PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 66666677777777777777765555555666666666666666665444445555556666666655553
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=2.3e-17 Score=165.33 Aligned_cols=112 Identities=25% Similarity=0.254 Sum_probs=57.5
Q ss_pred cCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcC
Q 002321 441 ALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLS 520 (936)
Q Consensus 441 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 520 (936)
+|++|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444443 233444444444444444444444444445555555555555555555445555555555555555
Q ss_pred CCcccCCCCcccccccccCeeecCCCcccccCC
Q 002321 521 FNSLTGGLPKQLVNLVHLSSFNISHNHLQGELP 553 (936)
Q Consensus 521 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 553 (936)
+|+|++..+..+..+++|+.|+|++|++.+.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 555554333445555666666666666655443
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=7e-17 Score=158.24 Aligned_cols=133 Identities=20% Similarity=0.198 Sum_probs=87.2
Q ss_pred CccccEEeccCCccc-CcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccc
Q 002321 99 LQFLRKLSLSSNNLT-GSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLAT 177 (936)
Q Consensus 99 l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 177 (936)
.++|++|+|++|+++ +.+|..+..+++|++|+|++|+|++. ..|..+++|++|+|++|++++.+|..+..+++|++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV---SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC---SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh---hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 367788888888887 66777777888888888888887743 45666777777777777776655655555666666
Q ss_pred cccccccccCCCC-CCCCCCCCCCEEecCCCCCCCCCc---cCccCCCCcceeeccccccc
Q 002321 178 INLSSNRFSSPLP-LGIWGLSALRTLDLSDNLLEGEIP---KGVESLKNLRVINLSKNMFS 234 (936)
Q Consensus 178 L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~ 234 (936)
|+|++|+|++... ..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666666665321 455666666666666666664333 24555666666666666554
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.2e-16 Score=156.57 Aligned_cols=133 Identities=23% Similarity=0.164 Sum_probs=93.7
Q ss_pred ccCCeeeccCcccc-CCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCcccccccccccccc
Q 002321 416 SGLQLLNLSRNSLV-GPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLI 494 (936)
Q Consensus 416 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 494 (936)
++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45566666666665 45565666666677777777766643 5567777777777777777766777777778888888
Q ss_pred ccCccccCCC-cccccccCCccEEEcCCCcccCCCC---cccccccccCeeecCCCcccc
Q 002321 495 LSKNNLTGPI-PIAIAKLTNLQNVDLSFNSLTGGLP---KQLVNLVHLSSFNISHNHLQG 550 (936)
Q Consensus 495 L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~ls~N~l~~ 550 (936)
|++|++++.. +..+..+++|++|+|++|++++..+ ..+..+++|+.|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 8888877532 2677778888888888888875444 377778888888888887763
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.6e-16 Score=152.28 Aligned_cols=128 Identities=23% Similarity=0.239 Sum_probs=97.1
Q ss_pred ccCCeeeccCcccc-CCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCcccccccccccccc
Q 002321 416 SGLQLLNLSRNSLV-GPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLI 494 (936)
Q Consensus 416 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 494 (936)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666777777766 56666677777777777777777754 6677788888888888888866777777788888888
Q ss_pred ccCccccCC-CcccccccCCccEEEcCCCcccCCCC---cccccccccCeeecCC
Q 002321 495 LSKNNLTGP-IPIAIAKLTNLQNVDLSFNSLTGGLP---KQLVNLVHLSSFNISH 545 (936)
Q Consensus 495 L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~ls~ 545 (936)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888863 34778888888888888888886555 4778888888888763
No 384
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.65 E-value=3e-15 Score=168.24 Aligned_cols=225 Identities=13% Similarity=0.121 Sum_probs=105.0
Q ss_pred ccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCC
Q 002321 112 LTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPL 191 (936)
Q Consensus 112 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (936)
++.+-..+|.++++|+.+.|.. .++ .|+..+|.++++|+.++|.++ ++......|.++++|+.+.+..+ +..+...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-Ccc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 4444445666666666666653 354 566666666666666666543 44444555666666666655443 3334445
Q ss_pred CCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccc
Q 002321 192 GIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLC 271 (936)
Q Consensus 192 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 271 (936)
+|.+...++....... .......|.++++|+.+.+.++.. ......|.++.+|+.+++..| ++......|.+...|
T Consensus 135 aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccccccCccc--cccchhhhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 5555543333222222 112334556666666666654432 244455566666666665544 332223334444444
Q ss_pred cEEeccCccccCCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEc
Q 002321 272 NFMNLRKNLFSGEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDF 348 (936)
Q Consensus 272 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 348 (936)
+.+.+..+... +.+......+|+.+.+..+. +......+.+...|+.+.+..+... .....|..+..++.+..
T Consensus 211 ~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~ 283 (394)
T 4fs7_A 211 ENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIY 283 (394)
T ss_dssp CBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEE
T ss_pred ceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceecc
Confidence 44433333211 11111222344444443321 1122333444445555555444322 33334444444444443
No 385
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=2.3e-16 Score=171.76 Aligned_cols=140 Identities=11% Similarity=0.129 Sum_probs=103.0
Q ss_pred ccccCCCcccccCceEEEEEEeCCCcEEEEEEeeccCcc-------------chH--------HHHHHHHHHHHcCCCCC
Q 002321 690 ALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLV-------------KSQ--------EDFEREVKKLGKVRHPN 748 (936)
Q Consensus 690 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~--------~~~~~E~~~l~~l~h~n 748 (936)
..|+....||+|+||.||+|...+|+.||||+++..... ... ....+|...+.++.+..
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 357788899999999999999989999999997542110 001 11345777777775554
Q ss_pred cceeeeEEEeCCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEcCCC-
Q 002321 749 LVTLEGYYWTQSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLIDGSG- 827 (936)
Q Consensus 749 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~~~~- 827 (936)
+.-..-+... ..++||||++|+++.++... ....+++.|++.+|.|||+.|||||||||.|||++++|
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence 4322222222 23799999999888765432 12356889999999999999999999999999998877
Q ss_pred ---------CeEEeeccCcccc
Q 002321 828 ---------EPKVGDYGLARLL 840 (936)
Q Consensus 828 ---------~~kl~Dfg~a~~~ 840 (936)
.+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 3899999987654
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=7.1e-16 Score=154.48 Aligned_cols=108 Identities=29% Similarity=0.319 Sum_probs=50.5
Q ss_pred cccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcccccccccccc
Q 002321 101 FLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINL 180 (936)
Q Consensus 101 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 180 (936)
+|++|+|++|+|+ .+|..|.++++|++|+|++|+|+ +..+..|..+++|++|+|
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~-------------------------~i~~~~f~~l~~L~~L~L 85 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-------------------------TLSNQSFSNMTQLLTLIL 85 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCC-------------------------CCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCC-------------------------EeCHhHccCCCCCCEEEC
Confidence 4555555555554 33444555555555555555554 333334444444444444
Q ss_pred ccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeeccccccc
Q 002321 181 SSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFS 234 (936)
Q Consensus 181 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 234 (936)
++|+|+++.+..|.++++|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 444444444444444444444444444444333333444444444444444443
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=5.7e-16 Score=153.14 Aligned_cols=113 Identities=21% Similarity=0.188 Sum_probs=61.8
Q ss_pred cCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcC
Q 002321 441 ALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLS 520 (936)
Q Consensus 441 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 520 (936)
+|++|++++|++++..+..+..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 44555555555544333444555555555555555554444445555555555555555555444555566666666666
Q ss_pred CCcccCCCCcccccccccCeeecCCCcccccCC
Q 002321 521 FNSLTGGLPKQLVNLVHLSSFNISHNHLQGELP 553 (936)
Q Consensus 521 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 553 (936)
+|++++..+..+..+++|++|++++|++.+.+|
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 666654333344556666666666666665554
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.64 E-value=2.1e-15 Score=168.72 Aligned_cols=263 Identities=11% Similarity=0.123 Sum_probs=155.2
Q ss_pred ccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccc
Q 002321 100 QFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATIN 179 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 179 (936)
..++.+.+.+ +++.+-..+|.++ +|+.++|..| ++ .|+..+|.+. +|+.+.|.+ .++.+.+..|.++++|+.++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~-~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LK-SIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CC-EECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-cc-EECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 4555555553 3444445566664 5666666655 54 5666666663 566666664 55555556666666666666
Q ss_pred cccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCC
Q 002321 180 LSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSG 259 (936)
Q Consensus 180 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 259 (936)
|++|+++.+...+|. ..+|+.+.|..+ ++.+....|.++++|+.+++..| ++.+...+|.+ .+|+.+++ .|.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 666666665555555 366666666643 55455556666666666666654 44444555555 56666666 344554
Q ss_pred CCchhhhccccccEEeccCcccc-----CCCCcccccCCccceecccCceeccccCcccccccccceEEccCCcccccCC
Q 002321 260 NLPETMQKLSLCNFMNLRKNLFS-----GEVPKWIGELESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLP 334 (936)
Q Consensus 260 ~~~~~l~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 334 (936)
.....|.++++|+.+.+.+|.+. ...+.+|..+++|+.++|.+ .++.....+|.++++|+.+.|..| ++....
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 55566666666666666666554 34455666677777777763 355455566667777777777444 555556
Q ss_pred hhhhccCCCCEEEccCCcCccCCChhhhc---cCCccccccccccc
Q 002321 335 DSMANCMNLVALDFSQNSMNGDLPQWIFS---SGLNKVSFAENKIR 377 (936)
Q Consensus 335 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---~~l~~l~l~~n~l~ 377 (936)
..|.++ +|+.+++++|.+.. ++...|. ..+..+.+..+.+.
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~-l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQ-VFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCB-CCCSSCCCSCTTCCEEEECGGGHH
T ss_pred HhCCCC-CCCEEEEcCCCCcc-cccccccCCCCCccEEEeCHHHHH
Confidence 667766 77777777766653 2222222 23455555555443
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.8e-16 Score=151.95 Aligned_cols=129 Identities=19% Similarity=0.173 Sum_probs=116.9
Q ss_pred CCcccEEeccCcccC-CCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCCCcEE
Q 002321 391 FESLQFLDLSHNEFS-GETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYSLKEL 469 (936)
Q Consensus 391 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 469 (936)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|++++. ..++.+++|++|+|++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 77888889999999999999999865 789999999999999999998788888889999999
Q ss_pred EecCCccCCc-CccccccccccccccccCccccCCCc---ccccccCCccEEEcCC
Q 002321 470 RLERNFLAGK-IPTSIENCSSLVSLILSKNNLTGPIP---IAIAKLTNLQNVDLSF 521 (936)
Q Consensus 470 ~Ls~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~ 521 (936)
++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|++||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999963 45889999999999999999997666 5799999999999874
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=6.7e-15 Score=164.63 Aligned_cols=268 Identities=14% Similarity=0.128 Sum_probs=219.2
Q ss_pred hhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCC
Q 002321 121 AKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALR 200 (936)
Q Consensus 121 ~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 200 (936)
..+..++.+.+.+ .++ .|+..+|.+. +|+.+.|..| ++.+...+|.++ +|+.+.|.+ .++.+.+.+|.++++|+
T Consensus 110 ~~~~~l~~i~ip~-~i~-~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~ 183 (401)
T 4fdw_A 110 EILKGYNEIILPN-SVK-SIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLK 183 (401)
T ss_dssp EECSSCSEEECCT-TCC-EECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCC
T ss_pred EecCCccEEEECC-ccC-EehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCC
Confidence 3457889999875 466 7899999986 7999999877 877777888884 799999986 78888889999999999
Q ss_pred EEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCcc
Q 002321 201 TLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNL 280 (936)
Q Consensus 201 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 280 (936)
.++|++|+++......|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..| ++......|.+ .+|+.+.+ .+.
T Consensus 184 ~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~ 258 (401)
T 4fdw_A 184 KADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNG 258 (401)
T ss_dssp EEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETT
T ss_pred eeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCC
Confidence 999999999955555665 689999999855 77677889999999999999975 66566777887 78999999 455
Q ss_pred ccCCCCcccccCCccceecccCceec-----cccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCcc
Q 002321 281 FSGEVPKWIGELESLETLDLSGNKFS-----GAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNG 355 (936)
Q Consensus 281 l~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 355 (936)
++.+...+|.++++|+.+++.+|.+. ...+..|.++++|+.++|. +.++......|.+|.+|+.+.|..| ++
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~- 335 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT- 335 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-
Confidence 66677889999999999999998875 4567789999999999999 4588778889999999999999655 43
Q ss_pred CCChhhhccCCccccccccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccc-cCCeeeccCcccc
Q 002321 356 DLPQWIFSSGLNKVSFAENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALS-GLQLLNLSRNSLV 429 (936)
Q Consensus 356 ~~p~~~~~~~l~~l~l~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 429 (936)
.++ .+.| ..+ +|+.+++++|.+.......|.+++ .++.|++..+.+.
T Consensus 336 ~I~----------------------~~aF----~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 336 QIN----------------------FSAF----NNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EEC----------------------TTSS----SSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEc----------------------HHhC----CCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 122 1222 345 899999999999888888888884 6889998888765
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.59 E-value=3.1e-14 Score=160.02 Aligned_cols=335 Identities=14% Similarity=0.093 Sum_probs=182.9
Q ss_pred ccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCc
Q 002321 135 SLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIP 214 (936)
Q Consensus 135 ~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 214 (936)
.++ .|...+|.++.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +.....
T Consensus 58 ~Vt-sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 58 DVV-SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EEE-EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred eEe-EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc
Confidence 455 68889999999999999975 477677788999999999999765 66677788889999998887765 443555
Q ss_pred cCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCcccccCCc
Q 002321 215 KGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGELES 294 (936)
Q Consensus 215 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 294 (936)
..|.++..++....... ......+|.++++|+.+.+.++. .......|..+.+|+.+.+..| ++.....+|.++..
T Consensus 134 ~aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~ 209 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECIL 209 (394)
T ss_dssp TTTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccc
Confidence 66766654444333332 22345678888888888886553 3234455666666666666554 33333445555566
Q ss_pred cceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCcccccccc
Q 002321 295 LETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSFAEN 374 (936)
Q Consensus 295 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l~~n 374 (936)
|+.+.+..+... . ........+|+.+.+..+ ++......|..+..|+.+.+..+..
T Consensus 210 L~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~--------------------- 265 (394)
T 4fs7_A 210 LENMEFPNSLYY-L-GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL--------------------- 265 (394)
T ss_dssp CCBCCCCTTCCE-E-CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC---------------------
T ss_pred cceeecCCCceE-e-ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc---------------------
Confidence 666655554332 1 111222344555555432 2223334444555555555444322
Q ss_pred ccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccc
Q 002321 375 KIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNG 454 (936)
Q Consensus 375 ~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 454 (936)
. .....|.....++.+.+..+.+. ...|..+.+|+.+.+.++ ++.
T Consensus 266 ------------------------------~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~ 310 (394)
T 4fs7_A 266 ------------------------------R-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKF 310 (394)
T ss_dssp ------------------------------E-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCE
T ss_pred ------------------------------e-eeccccccccccceeccCceeec---cccccccccccccccccc-cce
Confidence 1 22333334444444444333221 223444444554444433 332
Q ss_pred cCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCccccc
Q 002321 455 SIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVN 534 (936)
Q Consensus 455 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 534 (936)
.-...|.++.+|+.++|.++ ++..-..+|.++.+|+.+++..| ++.....+|.++++|+.+++..+ ++ .+...+.+
T Consensus 311 I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~ 386 (394)
T 4fs7_A 311 IGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFED 386 (394)
T ss_dssp ECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCT
T ss_pred echhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecC
Confidence 33344555555555555432 33233445555555555555544 44334445555555665555433 22 22334555
Q ss_pred ccccCe
Q 002321 535 LVHLSS 540 (936)
Q Consensus 535 l~~L~~ 540 (936)
.++|+.
T Consensus 387 c~~L~~ 392 (394)
T 4fs7_A 387 TTKFKW 392 (394)
T ss_dssp TCEEEE
T ss_pred CCCCcE
Confidence 555543
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=3.3e-17 Score=165.34 Aligned_cols=152 Identities=24% Similarity=0.302 Sum_probs=123.8
Q ss_pred CcccEEeccCcccCCCChh------hhcccccCCeeeccCccccCCCCccccCcccCCeeecCCccccccCCCCCCCcCC
Q 002321 392 ESLQFLDLSHNEFSGETPA------TIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENWLNGSIPPEIGGAYS 465 (936)
Q Consensus 392 ~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 465 (936)
..++.++++.|.+.+..|. .+..+++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 4566667777777666665 88899999999999999986 66 8888999999999999998 57777777889
Q ss_pred CcEEEecCCccCCcCccccccccccccccccCccccCCCc-ccccccCCccEEEcCCCcccCCCCcc----------ccc
Q 002321 466 LKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIP-IAIAKLTNLQNVDLSFNSLTGGLPKQ----------LVN 534 (936)
Q Consensus 466 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------l~~ 534 (936)
|+.|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 9999999999985 55 68889999999999999985433 47888999999999999998766653 788
Q ss_pred ccccCeeecCCCcccc
Q 002321 535 LVHLSSFNISHNHLQG 550 (936)
Q Consensus 535 l~~L~~L~ls~N~l~~ 550 (936)
+++|+.|| +|+++.
T Consensus 173 l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 173 LPNLKKLD--GMPVDV 186 (198)
T ss_dssp CSSCSEEC--CGGGTT
T ss_pred CCCcEEEC--CcccCH
Confidence 89999887 777663
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=9.1e-16 Score=151.46 Aligned_cols=132 Identities=17% Similarity=0.168 Sum_probs=82.2
Q ss_pred ccccCCeeeccCccccCCCCccccCcc-cCCeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCcccccccccccc
Q 002321 414 ALSGLQLLNLSRNSLVGPIPVAIGDLK-ALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVS 492 (936)
Q Consensus 414 ~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 492 (936)
.+++|++|+|++|+++. ++. +..+. +|++|+|++|.+++. ..+..+++|+.|+|++|+|++..+..+..+++|++
T Consensus 17 ~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 34445555555555552 232 23332 666666666666643 45666667777777777776443344567777777
Q ss_pred ccccCccccCCCcc--cccccCCccEEEcCCCcccCCCCcc----cccccccCeeecCCCccccc
Q 002321 493 LILSKNNLTGPIPI--AIAKLTNLQNVDLSFNSLTGGLPKQ----LVNLVHLSSFNISHNHLQGE 551 (936)
Q Consensus 493 L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~ls~N~l~~~ 551 (936)
|+|++|+++ .+|. .+..+++|+.|+|++|+++ .+|.. +..+++|+.||+++|.....
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 777777775 3454 6777777777777777776 45553 77777777777777776643
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=3.3e-17 Score=165.30 Aligned_cols=149 Identities=25% Similarity=0.321 Sum_probs=89.2
Q ss_pred ccCccccEEeccCCcccCcCCC------chhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcc
Q 002321 97 LQLQFLRKLSLSSNNLTGSISP------NLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLS 170 (936)
Q Consensus 97 ~~l~~L~~L~L~~n~l~~~~~~------~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~ 170 (936)
.....++.++++.++++|.+|. .|..+++|++|+|++|+|++ +| .|..+++|++|+|++|+|+ .+|..+.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchhh
Confidence 3444555555555555555554 66666666666666666663 55 4566666666666666666 3555555
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCc-cCccCCCCcceeecccccccccCCcc---------
Q 002321 171 LCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIP-KGVESLKNLRVINLSKNMFSGSIPDG--------- 240 (936)
Q Consensus 171 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~--------- 240 (936)
.+++|++|+|++|+|++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 66667777777776665 23 45566666666666666664322 35566666666777666666554432
Q ss_pred -cccccCcceee
Q 002321 241 -IGSCSLLRTID 251 (936)
Q Consensus 241 -l~~l~~L~~L~ 251 (936)
+..+++|++||
T Consensus 169 ~~~~l~~L~~Ld 180 (198)
T 1ds9_A 169 VVKRLPNLKKLD 180 (198)
T ss_dssp HHHHCSSCSEEC
T ss_pred HHHhCCCcEEEC
Confidence 45555555554
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=2.7e-15 Score=148.01 Aligned_cols=104 Identities=22% Similarity=0.242 Sum_probs=53.3
Q ss_pred CCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCcc--CccCCCCcceee
Q 002321 150 SLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPK--GVESLKNLRVIN 227 (936)
Q Consensus 150 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~ 227 (936)
+|++|+|++|+|++. ..|+.+++|++|+|++|+|++..+..+.++++|++|+|++|+|+ .+|. .+..+++|++|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 444444444444432 34444555555555555555433333355555555555555554 3333 455566666666
Q ss_pred cccccccccCCcc----cccccCcceeecccccc
Q 002321 228 LSKNMFSGSIPDG----IGSCSLLRTIDFSENSF 257 (936)
Q Consensus 228 L~~N~l~~~~p~~----l~~l~~L~~L~Ls~N~l 257 (936)
+++|.++ .+|.. +..+++|++||+++|.+
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 6666665 33332 55566666666666554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=3.5e-14 Score=138.97 Aligned_cols=108 Identities=24% Similarity=0.205 Sum_probs=64.3
Q ss_pred CeeecCCccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCC
Q 002321 443 NVLDLSENWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFN 522 (936)
Q Consensus 443 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 522 (936)
+.|++++|.++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 445555555542 444332 45566666666666555566666666666666666666555555666666666666666
Q ss_pred cccCCCCcccccccccCeeecCCCcccccCC
Q 002321 523 SLTGGLPKQLVNLVHLSSFNISHNHLQGELP 553 (936)
Q Consensus 523 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 553 (936)
+|++..+..+..+++|+.|+|++|++++.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 6665444456666666666666666666554
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=9.4e-14 Score=136.34 Aligned_cols=89 Identities=25% Similarity=0.232 Sum_probs=43.3
Q ss_pred CCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcccccccccCeeec
Q 002321 464 YSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQLVNLVHLSSFNI 543 (936)
Q Consensus 464 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 543 (936)
++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444445555555555555555433334445555555555555555333333555555555555
Q ss_pred CCCcccccC
Q 002321 544 SHNHLQGEL 552 (936)
Q Consensus 544 s~N~l~~~~ 552 (936)
++|++.+.+
T Consensus 113 ~~N~~~c~~ 121 (174)
T 2r9u_A 113 YNNPWDCEC 121 (174)
T ss_dssp CSSCBCTTB
T ss_pred CCCCccccc
Confidence 555555433
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.1e-13 Score=135.35 Aligned_cols=103 Identities=26% Similarity=0.325 Sum_probs=42.8
Q ss_pred cEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCC
Q 002321 127 RVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSD 206 (936)
Q Consensus 127 ~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 206 (936)
+.|++++|+++ .+|..++ ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 44555555554 3443221 3334444444444433344444444444444444444443333344444444444444
Q ss_pred CCCCCCCccCccCCCCcceeecccccc
Q 002321 207 NLLEGEIPKGVESLKNLRVINLSKNMF 233 (936)
Q Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l 233 (936)
|+|++..+..|.++++|++|+|++|.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~ 114 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPW 114 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCC
Confidence 444433333344444444444444433
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=2.3e-13 Score=133.58 Aligned_cols=84 Identities=24% Similarity=0.260 Sum_probs=33.8
Q ss_pred CcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeeccc
Q 002321 151 LRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSK 230 (936)
Q Consensus 151 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (936)
|++|+|++|+|++..|..|+.+++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 35 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~ 114 (174)
T 2r9u_A 35 KQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYN 114 (174)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCS
T ss_pred CcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCC
Confidence 33333333333333333444444444444444444433333334444444444444444433333344444444444444
Q ss_pred cccc
Q 002321 231 NMFS 234 (936)
Q Consensus 231 N~l~ 234 (936)
|.+.
T Consensus 115 N~~~ 118 (174)
T 2r9u_A 115 NPWD 118 (174)
T ss_dssp SCBC
T ss_pred CCcc
Confidence 4433
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.40 E-value=1e-11 Score=139.29 Aligned_cols=138 Identities=12% Similarity=0.206 Sum_probs=90.5
Q ss_pred ccCcCCCchhhcC-CCcEEEccCcccccccchhhhhcCCCCcEEEccCcc---CCCCCCCCccccccccccccccccccC
Q 002321 112 LTGSISPNLAKLQ-NLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNR---FSGKIPSSLSLCSTLATINLSSNRFSS 187 (936)
Q Consensus 112 l~~~~~~~l~~l~-~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~ 187 (936)
++.+-..+|.++. .|+.+.+..+ ++ .|...+|.++.+|+.+.+..|. ++.....+|..+.+|+.+.+..+ ++.
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce
Confidence 3434456777764 5888888654 55 6777888888888888887764 55555667777788887777654 555
Q ss_pred CCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeecccc
Q 002321 188 PLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSEN 255 (936)
Q Consensus 188 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 255 (936)
+...+|.++.+|+.+.+..+. .......|..+.+|+.+.+..+ ++.+...+|.. .+|+.+.+..+
T Consensus 128 I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~ 192 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAK 192 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTT
T ss_pred ehhhhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCc
Confidence 566677778888888876543 3245566777777777777654 33344444543 45666666543
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=4e-15 Score=164.84 Aligned_cols=135 Identities=20% Similarity=0.215 Sum_probs=67.8
Q ss_pred ccccEEeccCCcccCcCCCchhhc-----CCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCcc----
Q 002321 100 QFLRKLSLSSNNLTGSISPNLAKL-----QNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLS---- 170 (936)
Q Consensus 100 ~~L~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~---- 170 (936)
+.|++|+|++|+|+......|..+ ++|++|||++|.|++.-...++..+++|++|+|++|+|+......++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777777765444444443 56777777777765433334444555666666666666533222221
Q ss_pred -ccccccccccccccccCC----CCCCCCCCCCCCEEecCCCCCCCCC----ccCccCCCCcceeeccccccc
Q 002321 171 -LCSTLATINLSSNRFSSP----LPLGIWGLSALRTLDLSDNLLEGEI----PKGVESLKNLRVINLSKNMFS 234 (936)
Q Consensus 171 -~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 234 (936)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++.. +..+...++|++|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 234455555555555432 1122234455555555555554211 223333444555555555444
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=2.1e-11 Score=136.90 Aligned_cols=335 Identities=11% Similarity=0.128 Sum_probs=166.0
Q ss_pred cccccchhhhhcCC-CCcEEEccCccCCCCCCCCcccccccccccccccc---ccCCCCCCCCCCCCCCEEecCCCCCCC
Q 002321 136 LSGSIPDEFFKQCG-SLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNR---FSSPLPLGIWGLSALRTLDLSDNLLEG 211 (936)
Q Consensus 136 l~~~i~~~~f~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~L~~N~l~~ 211 (936)
++ .|.+.+|.++. .|+.+.+..+ ++.+...+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++.
T Consensus 51 Vt-~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 51 VS-KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EE-EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred ee-EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce
Confidence 44 67888888874 5899888754 666677788888888888887764 55555667777777777766654 333
Q ss_pred CCccCccCCCCcceeecccccccccCCcccccccCcceeeccccccCCCCchhhhccccccEEeccCccccCCCCccccc
Q 002321 212 EIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENSFSGNLPETMQKLSLCNFMNLRKNLFSGEVPKWIGE 291 (936)
Q Consensus 212 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 291 (936)
.....|.++.+|+.+.+..+ ++.+....|..+.+|+.+.+..+ ++..... +|..
T Consensus 128 I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~------------------------aF~~ 181 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEER------------------------AFTG 181 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTT------------------------TTTT
T ss_pred ehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccc------------------------cccc
Confidence 44455666667777666543 23244455666666666655443 2211111 1211
Q ss_pred CCccceecccCceeccccCcccccccccceEEccCCcccccCChhhhccCCCCEEEccCCcCccCCChhhhccCCccccc
Q 002321 292 LESLETLDLSGNKFSGAVPISIGNLQRLKVLNFSANRLTGSLPDSMANCMNLVALDFSQNSMNGDLPQWIFSSGLNKVSF 371 (936)
Q Consensus 292 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~l 371 (936)
.+|+.+.+..+-.. .....|.+..+++......+......-..+............
T Consensus 182 -~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 237 (394)
T 4gt6_A 182 -TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIR---------------------- 237 (394)
T ss_dssp -CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEE----------------------
T ss_pred -cceeEEEECCcccc-cccchhhhccccceecccccccccccceeecccccccccccc----------------------
Confidence 23444443332211 222334444444444433333221100000000000000000
Q ss_pred cccccccCCCCCCCCCCCCCCcccEEeccCcccCCCChhhhcccccCCeeeccCccccCCCCccccCcccCCeeecCCcc
Q 002321 372 AENKIREGMNGPFASSGSSFESLQFLDLSHNEFSGETPATIGALSGLQLLNLSRNSLVGPIPVAIGDLKALNVLDLSENW 451 (936)
Q Consensus 372 ~~n~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 451 (936)
++ ....+..+.+. +.++.+...+|.++..|+.+.+..+..+ ....+|.++++|+.+.+. +.
T Consensus 238 ------------~~----~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~ 298 (394)
T 4gt6_A 238 ------------YP----SQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SR 298 (394)
T ss_dssp ------------CC----TTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TT
T ss_pred ------------cc----cccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-Cc
Confidence 00 01122222222 1222233445555555666655544332 334455566666666664 33
Q ss_pred ccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcCCCcccCCCCcc
Q 002321 452 LNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLTGGLPKQ 531 (936)
Q Consensus 452 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 531 (936)
++......|.++.+|+.++|..+ ++..-..+|.++.+|+.+.|..+ ++.....+|.++++|+.+++.+|.... ..
T Consensus 299 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~ 373 (394)
T 4gt6_A 299 ITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NA 373 (394)
T ss_dssp CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HT
T ss_pred ccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hh
Confidence 44344455666666666666543 44344456666666666666543 544445566667777777776665431 34
Q ss_pred cccccccCeeecCCCc
Q 002321 532 LVNLVHLSSFNISHNH 547 (936)
Q Consensus 532 l~~l~~L~~L~ls~N~ 547 (936)
+....+|+.+.+..|.
T Consensus 374 ~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 374 ISTDSGLQNLPVAPGS 389 (394)
T ss_dssp CBCCCCC---------
T ss_pred hhccCCCCEEEeCCCC
Confidence 4555566666655543
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=3.9e-14 Score=156.86 Aligned_cols=161 Identities=19% Similarity=0.221 Sum_probs=119.6
Q ss_pred CCcccEEeccCcccCCCChhhhccc-----ccCCeeeccCccccCCCCccc-cCcccCCeeecCCccccccCCCCC----
Q 002321 391 FESLQFLDLSHNEFSGETPATIGAL-----SGLQLLNLSRNSLVGPIPVAI-GDLKALNVLDLSENWLNGSIPPEI---- 460 (936)
Q Consensus 391 l~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~---- 460 (936)
++.|+.|+|++|.|+......+... ++|++|+|++|.++......+ ..+++|+.|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3568899999999876555554443 689999999998864322222 346788999999999875433333
Q ss_pred -CCcCCCcEEEecCCccCC----cCccccccccccccccccCccccCC----CcccccccCCccEEEcCCCcccCC----
Q 002321 461 -GGAYSLKELRLERNFLAG----KIPTSIENCSSLVSLILSKNNLTGP----IPIAIAKLTNLQNVDLSFNSLTGG---- 527 (936)
Q Consensus 461 -~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 527 (936)
...++|++|+|++|.|+. .++..+..+++|++|+|++|+|++. ++..+...++|++|||++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 245789999999999874 3455567789999999999998753 356677788999999999999743
Q ss_pred CCcccccccccCeeecCCCccccc
Q 002321 528 LPKQLVNLVHLSSFNISHNHLQGE 551 (936)
Q Consensus 528 ~p~~l~~l~~L~~L~ls~N~l~~~ 551 (936)
+...+...++|++|+|++|++++.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHH
Confidence 445566678999999999998753
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=3.5e-12 Score=140.70 Aligned_cols=89 Identities=24% Similarity=0.189 Sum_probs=44.4
Q ss_pred ccCcccCCeeecCC-ccccccCCCCCCCcCCCcEEEecCCccCCcCccccccccccccccccCccccCCCcccccccCCc
Q 002321 436 IGDLKALNVLDLSE-NWLNGSIPPEIGGAYSLKELRLERNFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNL 514 (936)
Q Consensus 436 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 514 (936)
+..+++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.+|++|++|+|++|+|++..+..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 44444444555543 444444444445555555555555555544444555555555555555555543333444333 5
Q ss_pred cEEEcCCCccc
Q 002321 515 QNVDLSFNSLT 525 (936)
Q Consensus 515 ~~L~Ls~N~l~ 525 (936)
+.|+|++|+|.
T Consensus 106 ~~l~l~~N~~~ 116 (347)
T 2ifg_A 106 QELVLSGNPLH 116 (347)
T ss_dssp CEEECCSSCCC
T ss_pred eEEEeeCCCcc
Confidence 55555555555
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=2.4e-12 Score=141.92 Aligned_cols=132 Identities=22% Similarity=0.181 Sum_probs=105.1
Q ss_pred CeeecCCc-cccccCCCCCCCcCCCcEEEecC-CccCCcCccccccccccccccccCccccCCCcccccccCCccEEEcC
Q 002321 443 NVLDLSEN-WLNGSIPPEIGGAYSLKELRLER-NFLAGKIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLTNLQNVDLS 520 (936)
Q Consensus 443 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 520 (936)
..++++++ +|++ +|. +..+++|+.|+|++ |+|++..+..|.+|++|++|+|++|+|++..|..|.+|++|++|||+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688888 8884 788 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred CCcccCCCCcccccccccCeeecCCCcccccCCCCCccCc--CCCccccCCCCCCCCCC
Q 002321 521 FNSLTGGLPKQLVNLVHLSSFNISHNHLQGELPAGGFFNT--ISPSSVLGNPSLCGSAV 577 (936)
Q Consensus 521 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~--~~~~~~~gn~~~c~~~~ 577 (936)
+|+|++..+..+..+. |+.|+|++|+|.+.+.-..+... .....+..+...|..+.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 9999965555566565 99999999999987653322221 12223334555665543
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.17 E-value=4.1e-11 Score=126.36 Aligned_cols=136 Identities=13% Similarity=0.074 Sum_probs=106.9
Q ss_pred cCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CCCcceeeeEEEeCCeeEEEEEecCC
Q 002321 693 NKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HPNLVTLEGYYWTQSLQLLIYEFVSG 771 (936)
Q Consensus 693 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (936)
+....++.|+.+.||++... ++.+++|+...... .....+.+|+++++.+. +..+.++++++.+.+..++||||++|
T Consensus 17 ~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 17 RCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp EEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred eeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 34445777888999999854 78999999864211 22346889999999984 67788999999988889999999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 002321 772 GSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQ------------------------------------------- 808 (936)
Q Consensus 772 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~------------------------------------------- 808 (936)
.++.+.+.. ......++.++++++..||+
T Consensus 95 ~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 95 VLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp EEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred eehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 998876321 11234678899999999998
Q ss_pred ----------------CCcccCCCCCCCEEEcCCCCeEEeeccCcc
Q 002321 809 ----------------SNIIHYNIKSSNVLIDGSGEPKVGDYGLAR 838 (936)
Q Consensus 809 ----------------~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (936)
..++|+|++|.||++++++.+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 348999999999999876667799999775
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.12 E-value=4e-09 Score=117.55 Aligned_cols=127 Identities=12% Similarity=0.087 Sum_probs=55.7
Q ss_pred hhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccccccccccccccccCCCCCCCCCCCCCC
Q 002321 121 AKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALR 200 (936)
Q Consensus 121 ~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 200 (936)
....+|+.+.+.. .++ .|++.+|.++.+|+.+.|..+ ++.+...+|.++ +|+.+.+..+ ++.+...+|.+. +|+
T Consensus 43 ~~~~~i~~v~ip~-~vt-~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~ 116 (379)
T 4h09_A 43 KDRDRISEVRVNS-GIT-SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLD 116 (379)
T ss_dssp GGGGGCSEEEECT-TEE-EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCS
T ss_pred ccccCCEEEEeCC-Ccc-ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Ccc
Confidence 3334444444432 233 344444444444444444322 333333444443 3444444322 333333444442 566
Q ss_pred EEecCCCCCCCCCccCccCCCCcceeecccccccccCCcccccccCcceeeccccc
Q 002321 201 TLDLSDNLLEGEIPKGVESLKNLRVINLSKNMFSGSIPDGIGSCSLLRTIDFSENS 256 (936)
Q Consensus 201 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 256 (936)
.+.+..+... .....|.+. +|+.+.+..+ ++......|..+.+++.+.+..+.
T Consensus 117 ~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~ 169 (379)
T 4h09_A 117 DFEFPGATTE-IGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNN 169 (379)
T ss_dssp EEECCTTCCE-ECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTC
T ss_pred cccCCCcccc-ccccccccc-eeeeeeccce-eeccccchhccccccccccccccc
Confidence 6666544222 223334332 4555544433 333444556666666666655443
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07 E-value=2e-10 Score=120.96 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=96.0
Q ss_pred cccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCC--cceeeeEEEeCCeeEEEEEecCCCChhh
Q 002321 699 GRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPN--LVTLEGYYWTQSLQLLIYEFVSGGSLHK 776 (936)
Q Consensus 699 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~ 776 (936)
+.|..+.||++...+|+.++||+.... ....+.+|+++++.+.+.+ +.+++++....+..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 356669999998777888999997543 1245788999999985444 556888888777889999999998884
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------------
Q 002321 777 HLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSN---------------------------------------------- 810 (936)
Q Consensus 777 ~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---------------------------------------------- 810 (936)
... .. ...++.++++++..||+..
T Consensus 104 -~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 104 -SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp -TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred -cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 211 11 2256677888888888643
Q ss_pred ------------cccCCCCCCCEEEcCCCCeEEeeccCcc
Q 002321 811 ------------IIHYNIKSSNVLIDGSGEPKVGDYGLAR 838 (936)
Q Consensus 811 ------------ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (936)
++|+|++|.||++++++.+.|+|||.+.
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 9999999999999877667799999875
No 409
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.05 E-value=3.7e-10 Score=124.93 Aligned_cols=139 Identities=20% Similarity=0.275 Sum_probs=105.1
Q ss_pred CcccccCceEEEEEEeCCCcEEEEEEee--ccCccchHHHHHHHHHHHHcCC--CCCcceeeeEEEeC---CeeEEEEEe
Q 002321 696 CELGRGGFGAVYRTVLRDGRPVAIKKLT--VSSLVKSQEDFEREVKKLGKVR--HPNLVTLEGYYWTQ---SLQLLIYEF 768 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e~ 768 (936)
+.++.|.++.||+.... +..+++|+.. ..........+.+|+++++.+. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46899999999999875 5688999876 3332233467889999999997 45678888888766 457899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh----------------------------------------
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQ---------------------------------------- 808 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---------------------------------------- 808 (936)
++|..+.+... ..++..++..++.+++++|+.||+
T Consensus 123 v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 123 VSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred cCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 99887754211 126778888999999999999996
Q ss_pred ------------------CCcccCCCCCCCEEEcCCCC--eEEeeccCcccc
Q 002321 809 ------------------SNIIHYNIKSSNVLIDGSGE--PKVGDYGLARLL 840 (936)
Q Consensus 809 ------------------~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~~ 840 (936)
..++|||+++.||+++.++. +.|+||+.+..-
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 35899999999999998753 689999998753
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.03 E-value=1.4e-08 Score=113.14 Aligned_cols=131 Identities=11% Similarity=0.061 Sum_probs=93.3
Q ss_pred cccccCccccEEeccCCcccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEccCccCCCCCCCCccccc
Q 002321 94 RGLLQLQFLRKLSLSSNNLTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFSGKIPSSLSLCS 173 (936)
Q Consensus 94 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 173 (936)
+++....+|+.+.+.. .++.+-..+|.++++|+.++|..+ ++ .|...+|.++ +|+.+.+..+ ++......|...
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~- 113 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT- 113 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcCC-CCceEECCce-eeEeccceeccC-
Confidence 3456667888888874 577666788999999999999754 66 7888999987 6888877644 554555667654
Q ss_pred cccccccccccccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeecccccc
Q 002321 174 TLATINLSSNRFSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSKNMF 233 (936)
Q Consensus 174 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 233 (936)
+|+.+.+.++ ++.+...+|.+. +|+.+.+..+ ++......|..+.+++.+.+..+..
T Consensus 114 ~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~ 170 (379)
T 4h09_A 114 DLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNK 170 (379)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCS
T ss_pred CcccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccc
Confidence 7999998765 443455566554 6777777654 4435566778888888888776544
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.99 E-value=5.2e-11 Score=130.55 Aligned_cols=84 Identities=20% Similarity=0.307 Sum_probs=48.3
Q ss_pred CCCCcceeecccccccccCCcccc---cccCcceeeccccccCCC----CchhhhccccccEEeccCccccCCCCccccc
Q 002321 219 SLKNLRVINLSKNMFSGSIPDGIG---SCSLLRTIDFSENSFSGN----LPETMQKLSLCNFMNLRKNLFSGEVPKWIGE 291 (936)
Q Consensus 219 ~l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 291 (936)
.+++|++|+|.+|.+++..+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|+.|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356777777777766543322222 356777777777776643 2333455677777777777766433333332
Q ss_pred -CCccceecccCce
Q 002321 292 -LESLETLDLSGNK 304 (936)
Q Consensus 292 -l~~L~~L~L~~N~ 304 (936)
+ ...+++++++
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 2457777776
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.98 E-value=7.6e-12 Score=129.82 Aligned_cols=145 Identities=18% Similarity=0.141 Sum_probs=81.3
Q ss_pred CccceeEEecCCCCceEEeccCC---CCCCccccc-ccccCccccEEeccCCcccCcCC-CchhhcCCCcE--EEccCcc
Q 002321 63 PCNWFGVKCSPRSNRVIELTLNG---LSLTGRIGR-GLLQLQFLRKLSLSSNNLTGSIS-PNLAKLQNLRV--IDLSGNS 135 (936)
Q Consensus 63 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~g~~~~-~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~--L~Ls~N~ 135 (936)
.|+|.|+.|+....+|+.+-..+ ..+.|.+.+ .+..++. .|..++|.-++.+. ..|...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48999999997655776655444 234444543 2333333 23333444443322 23666666766 7778885
Q ss_pred cccccc---hhhhhcCCCCcEEEccCccCCC--CCCCCccccccccccccccccccCCCCCCCCCCC--CCCEEecCCCC
Q 002321 136 LSGSIP---DEFFKQCGSLRVISLAKNRFSG--KIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLS--ALRTLDLSDNL 208 (936)
Q Consensus 136 l~~~i~---~~~f~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~ 208 (936)
.. .++ ..+...+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.
T Consensus 155 ~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp HH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 44 232 2223567778888888888776 3345555666666666666666653 1122222 55555555555
Q ss_pred CCCC
Q 002321 209 LEGE 212 (936)
Q Consensus 209 l~~~ 212 (936)
+.+.
T Consensus 232 l~~~ 235 (267)
T 3rw6_A 232 LCDT 235 (267)
T ss_dssp TGGG
T ss_pred Cccc
Confidence 5543
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=2.7e-10 Score=124.85 Aligned_cols=85 Identities=11% Similarity=0.162 Sum_probs=56.0
Q ss_pred cccCcceeeccccccCCCCchhhh---ccccccEEeccCccccCC----CCcccccCCccceecccCceeccccCccccc
Q 002321 243 SCSLLRTIDFSENSFSGNLPETMQ---KLSLCNFMNLRKNLFSGE----VPKWIGELESLETLDLSGNKFSGAVPISIGN 315 (936)
Q Consensus 243 ~l~~L~~L~Ls~N~l~~~~~~~l~---~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 315 (936)
.+++|++|+|++|.+.+..+..+. .+++|+.|+|+.|.+++. ++..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 467888888888887644333333 467888888888888753 2333455688888888888877544333332
Q ss_pred ccccceEEccCCc
Q 002321 316 LQRLKVLNFSANR 328 (936)
Q Consensus 316 l~~L~~L~L~~N~ 328 (936)
.- ...++++.++
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 11 3567887776
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.90 E-value=8.5e-10 Score=118.92 Aligned_cols=185 Identities=16% Similarity=0.133 Sum_probs=121.2
Q ss_pred CcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CCC--cceeeeEEEeCC---eeEEEEEec
Q 002321 696 CELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HPN--LVTLEGYYWTQS---LQLLIYEFV 769 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 769 (936)
+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+..... ..++|||++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 458999999999863 56899986432 33567899999998884 333 334444433322 348899999
Q ss_pred CCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------
Q 002321 770 SGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQ----------------------------------------- 808 (936)
Q Consensus 770 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~----------------------------------------- 808 (936)
+|.++.+.... .++..++..++.++++.++.||+
T Consensus 99 ~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 99 KGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 99888753322 16677777888888888888885
Q ss_pred -----------------CCcccCCCCCCCEEEcC--CCCeEEeeccCccccCCCccccccccc---cC---------ccc
Q 002321 809 -----------------SNIIHYNIKSSNVLIDG--SGEPKVGDYGLARLLPMLDRYVLSSKI---QS---------ALG 857 (936)
Q Consensus 809 -----------------~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~---~~---------~~~ 857 (936)
..++|+|++|.||++++ .+.+.++||+.+..-....+....... .+ ..+
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 23699999999999998 456889999988653221110000000 00 001
Q ss_pred ccC-cccccCcccCCchhhHHHHHHHHHHHHcCCCCCCc
Q 002321 858 YMA-PEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLST 895 (936)
Q Consensus 858 y~a-PE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~ 895 (936)
+.. |+... ......+.|+++.++|++.+|+.+|..
T Consensus 254 ~~~~~~~~~---r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 254 HKDIPTVLE---KYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp CSCHHHHHH---HHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCcHHHHH---HHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 112 23221 112346899999999999999987643
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.57 E-value=1.8e-07 Score=101.32 Aligned_cols=132 Identities=16% Similarity=0.138 Sum_probs=97.4
Q ss_pred cCCCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCC----CCcceeeeEEEeCCeeEEEEEe
Q 002321 693 NKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRH----PNLVTLEGYYWTQSLQLLIYEF 768 (936)
Q Consensus 693 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e~ 768 (936)
...+.++.|....||+. |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++||||
T Consensus 40 ~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~---~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC----NEQYVVKVPKRD---SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp SCEEEEEECSSEEEEEE----TTTEEEEEESSH---HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred EEEEeCCCCCCceEEEE----CCEEEEEeCCcH---HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 44567899999999997 677899976432 224568999999988865 223444444 456899999
Q ss_pred cCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------
Q 002321 769 VSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS--------------------------------------- 809 (936)
Q Consensus 769 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~--------------------------------------- 809 (936)
++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 109 i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 109 IKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred cCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988643321 156666777777888888777732
Q ss_pred ------------------------CcccCCCCCCCEEEcCCCCeEEeeccCcccc
Q 002321 810 ------------------------NIIHYNIKSSNVLIDGSGEPKVGDYGLARLL 840 (936)
Q Consensus 810 ------------------------~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 840 (936)
.++|+|++|.||+++.++.+.|+||+.+..-
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 2389999999999998766799999998654
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=4.8e-09 Score=103.70 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=71.4
Q ss_pred ccccccccCccccEEeccCC-cccCc----CCCchhhcCCCcEEEccCcccccccc---hhhhhcCCCCcEEEccCccCC
Q 002321 91 RIGRGLLQLQFLRKLSLSSN-NLTGS----ISPNLAKLQNLRVIDLSGNSLSGSIP---DEFFKQCGSLRVISLAKNRFS 162 (936)
Q Consensus 91 ~~~~~l~~l~~L~~L~L~~n-~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~i~---~~~f~~l~~L~~L~L~~N~l~ 162 (936)
.+...+...+.|++|+|++| +|+.. +...+...++|++|+|++|+|.+.-- ...+...++|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34445667778888888888 77643 23445556778888888888763211 122344556666666666665
Q ss_pred CCCCCCccccccccccccccccccCCCCCCCCCCCCCCEEec--CCCCCCCC----CccCccCCCCcceeeccccccc
Q 002321 163 GKIPSSLSLCSTLATINLSSNRFSSPLPLGIWGLSALRTLDL--SDNLLEGE----IPKGVESLKNLRVINLSKNMFS 234 (936)
Q Consensus 163 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 234 (936)
...... +..++...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 107 ~~g~~~--------------------l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILA--------------------LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHH--------------------HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHH--------------------HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 321000 1223444456666666 56666533 2233444567777777777765
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.47 E-value=1.7e-08 Score=104.73 Aligned_cols=79 Identities=23% Similarity=0.236 Sum_probs=44.3
Q ss_pred CcCCCcEEEecCCccCC--cCccccccccccccccccCccccCCCcccccccC--CccEEEcCCCcccCCCCc-------
Q 002321 462 GAYSLKELRLERNFLAG--KIPTSIENCSSLVSLILSKNNLTGPIPIAIAKLT--NLQNVDLSFNSLTGGLPK------- 530 (936)
Q Consensus 462 ~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~------- 530 (936)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34455555555555554 3345555666666666666666643 2233333 666777777776655542
Q ss_pred ccccccccCeee
Q 002321 531 QLVNLVHLSSFN 542 (936)
Q Consensus 531 ~l~~l~~L~~L~ 542 (936)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 245566666654
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=2.2e-08 Score=98.82 Aligned_cols=93 Identities=18% Similarity=0.263 Sum_probs=47.6
Q ss_pred hhhhcccccCCeeeccCc-cccCC----CCccccCcccCCeeecCCcccccc----CCCCCCCcCCCcEEEecCCccCCc
Q 002321 409 PATIGALSGLQLLNLSRN-SLVGP----IPVAIGDLKALNVLDLSENWLNGS----IPPEIGGAYSLKELRLERNFLAGK 479 (936)
Q Consensus 409 ~~~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 479 (936)
...+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344556677888888877 76521 233445556666666666666531 122223334555555555555431
Q ss_pred ----Cccccccccccccccc--cCcccc
Q 002321 480 ----IPTSIENCSSLVSLIL--SKNNLT 501 (936)
Q Consensus 480 ----~p~~l~~l~~L~~L~L--~~N~l~ 501 (936)
+...+...++|++|+| ++|.++
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2333344444444444 444443
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.33 E-value=2.4e-06 Score=91.63 Aligned_cols=133 Identities=14% Similarity=0.099 Sum_probs=91.2
Q ss_pred CcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCC---CcceeeeEEE-eCCeeEEEEEecCC
Q 002321 696 CELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHP---NLVTLEGYYW-TQSLQLLIYEFVSG 771 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 771 (936)
+.++.|....||+. |+.++||+... ......+.+|+++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 35788888899987 57789998532 12356789999999999653 3556666664 34557899999999
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 002321 772 GSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQ------------------------------------------- 808 (936)
Q Consensus 772 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~------------------------------------------- 808 (936)
..+.+..... ++..+...++.++++.|+.||+
T Consensus 98 ~~l~~~~~~~-----l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 98 QILGEDGMAV-----LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp EECHHHHHTT-----SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred eECchhhhhh-----CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8886532110 3334444444444444444442
Q ss_pred -----------------CCcccCCCCCCCEEEcC---CCC-eEEeeccCcccc
Q 002321 809 -----------------SNIIHYNIKSSNVLIDG---SGE-PKVGDYGLARLL 840 (936)
Q Consensus 809 -----------------~~ivH~Dlkp~NIll~~---~~~-~kl~Dfg~a~~~ 840 (936)
..++|+|+++.||+++. ++. +.|+||+.+..-
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 24689999999999997 455 489999988653
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.33 E-value=2.8e-06 Score=89.45 Aligned_cols=131 Identities=20% Similarity=0.216 Sum_probs=93.8
Q ss_pred ccccCce-EEEEEEeC-CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CCCcceeeeEEEeCCeeEEEEEecCCCCh
Q 002321 698 LGRGGFG-AVYRTVLR-DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HPNLVTLEGYYWTQSLQLLIYEFVSGGSL 774 (936)
Q Consensus 698 iG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L 774 (936)
+..|..| .||+.... ++..++||+-... ....+.+|...++.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 4445555 69988765 4678999986532 3467889999998884 33477888999999999999999999887
Q ss_pred hhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------------
Q 002321 775 HKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQS--------------------------------------------- 809 (936)
Q Consensus 775 ~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~--------------------------------------------- 809 (936)
.+...... .....++.+++..+..||+.
T Consensus 108 ~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 108 FQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 76543211 12233445555555555521
Q ss_pred -------------CcccCCCCCCCEEEcCCCCeEEeeccCccc
Q 002321 810 -------------NIIHYNIKSSNVLIDGSGEPKVGDYGLARL 839 (936)
Q Consensus 810 -------------~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (936)
.++|+|+++.||+++.++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 158999999999999887778999998753
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.24 E-value=3.2e-06 Score=89.56 Aligned_cols=75 Identities=23% Similarity=0.254 Sum_probs=59.0
Q ss_pred CCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCC---CcceeeeEEEeCCeeEEEEEecCC
Q 002321 695 DCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHP---NLVTLEGYYWTQSLQLLIYEFVSG 771 (936)
Q Consensus 695 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 771 (936)
.+.||.|.++.||+++..+|+.++||+..... ......+.+|++.++.+.+. .+.+++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 34689999999999998889999999964322 22246789999999999765 577777663 35899999999
Q ss_pred CCh
Q 002321 772 GSL 774 (936)
Q Consensus 772 g~L 774 (936)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.15 E-value=3.5e-06 Score=92.53 Aligned_cols=138 Identities=16% Similarity=0.208 Sum_probs=88.7
Q ss_pred CcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCC--cceeeeEEEeC-CeeEEEEEecCCC
Q 002321 696 CELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPN--LVTLEGYYWTQ-SLQLLIYEFVSGG 772 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~g 772 (936)
+.++.|....+|+... +++.+++|+.... ..+.+|+.+++.+.... +.++++++.+. +..++||||++|.
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 4588899999999876 5889999987432 35889999999886533 56677777654 5679999999986
Q ss_pred Chhhh------------------hhccCCCC--------------CCCHHHHH---------------------HHHHHH
Q 002321 773 SLHKH------------------LHEGSGGN--------------FLSWNERF---------------------NVIQGT 799 (936)
Q Consensus 773 ~L~~~------------------l~~~~~~~--------------~~~~~~~~---------------------~i~~~i 799 (936)
++.+. ++...... .-.|.+.+ .....+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 65421 11110000 00111110 111112
Q ss_pred HHHHHHHHh----CCcccCCCCCCCEEEcCCCCeEEeeccCcccc
Q 002321 800 AKSLAHLHQ----SNIIHYNIKSSNVLIDGSGEPKVGDYGLARLL 840 (936)
Q Consensus 800 ~~al~~LH~----~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 840 (936)
....+++.. ..++|+|+++.||+++.++.+.|+||+.+..-
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 222223322 35899999999999988778889999988653
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.08 E-value=2.7e-06 Score=93.63 Aligned_cols=81 Identities=9% Similarity=0.028 Sum_probs=56.0
Q ss_pred Ccc-cccCceEEEEEEeC-------CCcEEEEEEeeccCc--cchHHHHHHHHHHHHcCC-C--CCcceeeeEEEeC---
Q 002321 696 CEL-GRGGFGAVYRTVLR-------DGRPVAIKKLTVSSL--VKSQEDFEREVKKLGKVR-H--PNLVTLEGYYWTQ--- 759 (936)
Q Consensus 696 ~~i-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~--- 759 (936)
+.| +.|....+|+.... +++.+++|+...... ......+.+|+++++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78889999998754 267899998754320 001245788999988884 3 3567788777654
Q ss_pred CeeEEEEEecCCCChhh
Q 002321 760 SLQLLIYEFVSGGSLHK 776 (936)
Q Consensus 760 ~~~~lv~e~~~~g~L~~ 776 (936)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877653
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.95 E-value=1.6e-05 Score=88.78 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=48.9
Q ss_pred CcccccCceEEEEEEeC-CCcEEEEEEeeccCc------cchHHHHHHHHHHHHcCCC--CC-cceeeeEEEeCCeeEEE
Q 002321 696 CELGRGGFGAVYRTVLR-DGRPVAIKKLTVSSL------VKSQEDFEREVKKLGKVRH--PN-LVTLEGYYWTQSLQLLI 765 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~lv 765 (936)
+.||.|.++.||+++.. +++.|+||....... ....+++.+|.++++.+.. +. +.+++.+ +....++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 36899999999999754 468899998653221 0123456788888888742 33 4455543 44556899
Q ss_pred EEecCCC
Q 002321 766 YEFVSGG 772 (936)
Q Consensus 766 ~e~~~~g 772 (936)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999763
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.91 E-value=2.9e-05 Score=84.71 Aligned_cols=137 Identities=14% Similarity=0.226 Sum_probs=79.7
Q ss_pred cccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCC--CCCcceeee------EEEeCCeeEEEEEe
Q 002321 697 ELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR--HPNLVTLEG------YYWTQSLQLLIYEF 768 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lv~e~ 768 (936)
.|+.|..+.||+....+| .+++|+.... ..++..|..+++.+. .-.+.+++. +....+..+++|||
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 466677889999987644 5999998642 234445666665553 112333332 22356677899999
Q ss_pred cCCCChh--------------hhhhcc--CC--C-------CCCCHHHH-------------------------------
Q 002321 769 VSGGSLH--------------KHLHEG--SG--G-------NFLSWNER------------------------------- 792 (936)
Q Consensus 769 ~~~g~L~--------------~~l~~~--~~--~-------~~~~~~~~------------------------------- 792 (936)
++|..+. ..++.. .. . ..-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 011111 00 0 01122211
Q ss_pred HHHHHHHHHHHHHHH-------------hCCcccCCCCCCCEEEcCCCCeEEeeccCccc
Q 002321 793 FNVIQGTAKSLAHLH-------------QSNIIHYNIKSSNVLIDGSGEPKVGDYGLARL 839 (936)
Q Consensus 793 ~~i~~~i~~al~~LH-------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (936)
..+..++.+++++|+ ..+++|+|+++.||+++.++.+.++||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 011122334566665 35799999999999998888999999998854
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.77 E-value=6e-06 Score=79.15 Aligned_cols=84 Identities=14% Similarity=0.153 Sum_probs=43.9
Q ss_pred ccCCeeecCCccccccCCCCCCCcCCCcEEEecCCc-cCCcCccccccc----cccccccccCcc-ccCCCcccccccCC
Q 002321 440 KALNVLDLSENWLNGSIPPEIGGAYSLKELRLERNF-LAGKIPTSIENC----SSLVSLILSKNN-LTGPIPIAIAKLTN 513 (936)
Q Consensus 440 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~l~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 513 (936)
.+|+.|||+++.++..--..+.++++|+.|+|++|. |+..--..+..+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666654433445556666666666653 543333334332 245666665552 55433344455555
Q ss_pred ccEEEcCCCc
Q 002321 514 LQNVDLSFNS 523 (936)
Q Consensus 514 L~~L~Ls~N~ 523 (936)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 5555555553
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.71 E-value=7.1e-06 Score=78.64 Aligned_cols=82 Identities=10% Similarity=0.074 Sum_probs=35.8
Q ss_pred CCcEEEecCCccCCcCccccccccccccccccCcc-ccCCCccccccc----CCccEEEcCCCc-ccCCCCccccccccc
Q 002321 465 SLKELRLERNFLAGKIPTSIENCSSLVSLILSKNN-LTGPIPIAIAKL----TNLQNVDLSFNS-LTGGLPKQLVNLVHL 538 (936)
Q Consensus 465 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~l~~l~~L 538 (936)
+|+.|||+++.|+..--..+.++++|+.|+|++|. +++.--..+..+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555443333344445555555555542 433222233332 235555555542 442222334444555
Q ss_pred CeeecCCC
Q 002321 539 SSFNISHN 546 (936)
Q Consensus 539 ~~L~ls~N 546 (936)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.57 E-value=0.00028 Score=75.13 Aligned_cols=134 Identities=19% Similarity=0.172 Sum_probs=91.3
Q ss_pred CcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCC---CCCcceeeeEEEeCCeeEEEEEecCCC
Q 002321 696 CELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR---HPNLVTLEGYYWTQSLQLLIYEFVSGG 772 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (936)
+.|+.|.+..+|+... ++..++||+.... ....+.+|++.++.+. ...+.++++++...+..++||||+++.
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 4689999999999886 4778999987532 3567889999998883 356888898888888899999999987
Q ss_pred Chhh-----------hhhccCC-CC------------------CCCHHHHH---HHHH----------------HHHH-H
Q 002321 773 SLHK-----------HLHEGSG-GN------------------FLSWNERF---NVIQ----------------GTAK-S 802 (936)
Q Consensus 773 ~L~~-----------~l~~~~~-~~------------------~~~~~~~~---~i~~----------------~i~~-a 802 (936)
.+.. .++.... .. .-+|.+.. ++.. +++. .
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1222111 00 12454332 1111 1111 1
Q ss_pred HHHHH----hCCcccCCCCCCCEEEcCCCCeEEeecc
Q 002321 803 LAHLH----QSNIIHYNIKSSNVLIDGSGEPKVGDYG 835 (936)
Q Consensus 803 l~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (936)
...|. ...++|+|+.+.|++++.++ +.|.||+
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22342 24699999999999999887 8899984
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.52 E-value=0.0002 Score=80.34 Aligned_cols=81 Identities=12% Similarity=0.021 Sum_probs=47.9
Q ss_pred HhCCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccccccccCcccccCcccccCc--ccCCchhhHHHHHHHHH
Q 002321 807 HQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRT--VKITDKCDVYGFGVLVL 884 (936)
Q Consensus 807 H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwSlG~~l~ 884 (936)
+...++|||+++.||+++.++ ++++||+.+..-+..-+... ....-...|.+|+..... .......++.+....+|
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGA-YLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHH-HHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHH-HHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 456799999999999999877 99999998875321111000 000011235666544211 01122455567777778
Q ss_pred HHHcC
Q 002321 885 EVVTG 889 (936)
Q Consensus 885 el~~g 889 (936)
+.+.+
T Consensus 308 ~~y~~ 312 (420)
T 2pyw_A 308 NLFNK 312 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.34 E-value=0.00072 Score=71.49 Aligned_cols=75 Identities=23% Similarity=0.288 Sum_probs=54.2
Q ss_pred CCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCC---CcceeeeEEEeCCeeEEEEEecCC
Q 002321 695 DCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHP---NLVTLEGYYWTQSLQLLIYEFVSG 771 (936)
Q Consensus 695 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 771 (936)
.+.+|.|..+.||+.+..||+.|+||+..... ......+.+|++.|+.+... -+.+++++ +. .++||||+++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~l~~ 94 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEECCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEeecc
Confidence 45689999999999999999999999875432 22235678999999988422 34444443 22 3789999987
Q ss_pred CCh
Q 002321 772 GSL 774 (936)
Q Consensus 772 g~L 774 (936)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.26 E-value=4.3e-05 Score=74.66 Aligned_cols=63 Identities=16% Similarity=0.208 Sum_probs=30.2
Q ss_pred CCcccEEeccCc-ccCCC----ChhhhcccccCCeeeccCccccC----CCCccccCcccCCeeecCCcccc
Q 002321 391 FESLQFLDLSHN-EFSGE----TPATIGALSGLQLLNLSRNSLVG----PIPVAIGDLKALNVLDLSENWLN 453 (936)
Q Consensus 391 l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~ 453 (936)
-+.|++|+|++| +|... +.+.+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|.|.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 345666666664 55422 22233344555666666665542 12223333444555555555554
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.21 E-value=5.7e-05 Score=73.80 Aligned_cols=87 Identities=20% Similarity=0.192 Sum_probs=48.1
Q ss_pred hcccccCCeeeccCc-cccC----CCCccccCcccCCeeecCCccccccCC----CCCCCcCCCcEEEecCCccCCc---
Q 002321 412 IGALSGLQLLNLSRN-SLVG----PIPVAIGDLKALNVLDLSENWLNGSIP----PEIGGAYSLKELRLERNFLAGK--- 479 (936)
Q Consensus 412 ~~~l~~L~~L~L~~N-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~--- 479 (936)
+.+-+.|++|+|++| +|.. .+...+..-+.|+.|+|++|+|...-- +.+..-+.|+.|+|++|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344567888888875 6642 233455566677777777777764222 2223445566666666666532
Q ss_pred -CccccccccccccccccCc
Q 002321 480 -IPTSIENCSSLVSLILSKN 498 (936)
Q Consensus 480 -~p~~l~~l~~L~~L~L~~N 498 (936)
+-+.+...+.|++|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 2333444445555555543
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.14 E-value=0.0025 Score=68.64 Aligned_cols=139 Identities=14% Similarity=0.110 Sum_probs=81.4
Q ss_pred cccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCC--CcceeeeE-----EEeCCeeEEEEEec
Q 002321 697 ELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHP--NLVTLEGY-----YWTQSLQLLIYEFV 769 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e~~ 769 (936)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+... .+++++.. ....+..+++|||+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 456 77789999887677789999986332 1345677788888877421 23444443 22345667899999
Q ss_pred CCCChhh-----h---------hhcc----CC--CCCCCHHHH----------------------HHHHHHHHHHHHHH-
Q 002321 770 SGGSLHK-----H---------LHEG----SG--GNFLSWNER----------------------FNVIQGTAKSLAHL- 806 (936)
Q Consensus 770 ~~g~L~~-----~---------l~~~----~~--~~~~~~~~~----------------------~~i~~~i~~al~~L- 806 (936)
+|..+.. . ++.. .. ....++... ...+.+++..++-.
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8754321 0 1110 00 011222111 11111222222222
Q ss_pred ---HhCCcccCCCCCCCEEEcCCCCeEEeeccCcccc
Q 002321 807 ---HQSNIIHYNIKSSNVLIDGSGEPKVGDYGLARLL 840 (936)
Q Consensus 807 ---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 840 (936)
....++|||+++.||+++ + .+.++||+.+..-
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 234589999999999999 4 8999999887543
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.13 E-value=0.00078 Score=72.48 Aligned_cols=140 Identities=12% Similarity=0.100 Sum_probs=79.5
Q ss_pred CcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCC--cceeeeE------EEeCCeeEEEEE
Q 002321 696 CELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPN--LVTLEGY------YWTQSLQLLIYE 767 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv~e 767 (936)
+.|+.|....+|+....+| .+++|+..... ..+.+..|+.+++.+.... +.+++.. ....+..+++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 3577888899999987655 68899886421 1234567787777763212 3333321 223456789999
Q ss_pred ecCCCChhh--------------hhhcc--C--CCC-----CCCHHHHHH------------HHHHHHHHHHHHHh----
Q 002321 768 FVSGGSLHK--------------HLHEG--S--GGN-----FLSWNERFN------------VIQGTAKSLAHLHQ---- 808 (936)
Q Consensus 768 ~~~~g~L~~--------------~l~~~--~--~~~-----~~~~~~~~~------------i~~~i~~al~~LH~---- 808 (936)
|++|..+.. .++.. . ... ...|...+. +...+.+.++++++
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 999865421 01111 0 000 011222110 00113344555542
Q ss_pred ---CCcccCCCCCCCEEEcCCCCeEEeeccCccc
Q 002321 809 ---SNIIHYNIKSSNVLIDGSGEPKVGDYGLARL 839 (936)
Q Consensus 809 ---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (936)
.+++|+|+++.||++++++.+.++||+.+..
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 3699999999999999876668999998754
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.12 E-value=0.00079 Score=72.87 Aligned_cols=138 Identities=13% Similarity=0.062 Sum_probs=72.7
Q ss_pred cccccCceE-EEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCC--CCcceeeeEEEeCCeeEEEEEecCCCC
Q 002321 697 ELGRGGFGA-VYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRH--PNLVTLEGYYWTQSLQLLIYEFVSGGS 773 (936)
Q Consensus 697 ~iG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 773 (936)
.|+.|+... +|+....+|+.+++|...... ...+..|+++++.+.. -.+.+++.+..+.+ +++||++.+..
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE----GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC----CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 455554444 667765446778887654321 0234567777776632 23556666543333 78999997655
Q ss_pred hhhhhhcc---------------------CCC--CCCCHHHHH-------H-------------HHHHHHHHHHHH----
Q 002321 774 LHKHLHEG---------------------SGG--NFLSWNERF-------N-------------VIQGTAKSLAHL---- 806 (936)
Q Consensus 774 L~~~l~~~---------------------~~~--~~~~~~~~~-------~-------------i~~~i~~al~~L---- 806 (936)
+.+++... ... ..++..... . ....+.+.++.+
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 54433211 000 011111100 0 001112223333
Q ss_pred --HhCCcccCCCCCCCEEEcCC----CCeEEeeccCcccc
Q 002321 807 --HQSNIIHYNIKSSNVLIDGS----GEPKVGDYGLARLL 840 (936)
Q Consensus 807 --H~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~ 840 (936)
+...++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 23469999999999999875 68999999988654
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.08 E-value=0.00053 Score=73.05 Aligned_cols=71 Identities=7% Similarity=0.062 Sum_probs=44.5
Q ss_pred CCcccccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCc-ceeeeEEEeCCeeEEEEEec-CCC
Q 002321 695 DCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNL-VTLEGYYWTQSLQLLIYEFV-SGG 772 (936)
Q Consensus 695 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g 772 (936)
.+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .+++++ +.+..++++||+ +|.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 456888999999998 56899987543111 1123568888777743333 355543 343457899999 665
Q ss_pred Ch
Q 002321 773 SL 774 (936)
Q Consensus 773 ~L 774 (936)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.99 E-value=0.0013 Score=71.98 Aligned_cols=137 Identities=12% Similarity=0.143 Sum_probs=81.6
Q ss_pred cccccCceEEEEEEeC--------CCcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CCCcceeeeEEEeCCeeEEEEE
Q 002321 697 ELGRGGFGAVYRTVLR--------DGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 767 (936)
.+..|-...+|++... +++.|++|+.... ......+.+|.++++.+. +.-..++++++.+ .+|||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 4666777889998864 2478999986321 223566779999998884 3333566655532 39999
Q ss_pred ecCCCChhhh-----------------hhccC--CCCCC--CHHHHHHHHHHHHH-------------------HHHHHH
Q 002321 768 FVSGGSLHKH-----------------LHEGS--GGNFL--SWNERFNVIQGTAK-------------------SLAHLH 807 (936)
Q Consensus 768 ~~~~g~L~~~-----------------l~~~~--~~~~~--~~~~~~~i~~~i~~-------------------al~~LH 807 (936)
|++|..+..- ++... ..+.. -+.+..++..++.. .++.|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998655311 01111 01111 23445555544322 233332
Q ss_pred ----h----CCcccCCCCCCCEEEcCC----CCeEEeeccCccc
Q 002321 808 ----Q----SNIIHYNIKSSNVLIDGS----GEPKVGDYGLARL 839 (936)
Q Consensus 808 ----~----~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~ 839 (936)
. ..++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 258999999999999876 7899999998864
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.92 E-value=0.0012 Score=60.17 Aligned_cols=37 Identities=24% Similarity=0.464 Sum_probs=23.3
Q ss_pred CCcEEEccCcccccccchhhhhcCCCCcEEEccCccCC
Q 002321 125 NLRVIDLSGNSLSGSIPDEFFKQCGSLRVISLAKNRFS 162 (936)
Q Consensus 125 ~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L~~N~l~ 162 (936)
+|++|||++|+|+ .+|.++|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 4566666666666 566666666666666666666553
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.81 E-value=0.0023 Score=71.64 Aligned_cols=71 Identities=13% Similarity=0.164 Sum_probs=48.1
Q ss_pred cccccCceEEEEEEeCC--------CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCc-ceeeeEEEeCCeeEEEEE
Q 002321 697 ELGRGGFGAVYRTVLRD--------GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNL-VTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e 767 (936)
.|+.|....||++...+ ++.+++|+..... ..+.+.+|..+++.+...++ .++++.+. + .+|+|
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE---TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC---CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC---cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 47788889999998653 4789999884321 12455689999888843333 56666543 2 48999
Q ss_pred ecCCCCh
Q 002321 768 FVSGGSL 774 (936)
Q Consensus 768 ~~~~g~L 774 (936)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986444
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.77 E-value=0.0015 Score=59.58 Aligned_cols=37 Identities=30% Similarity=0.364 Sum_probs=17.3
Q ss_pred ccccccccCccccCCCcccccccCCccEEEcCCCccc
Q 002321 489 SLVSLILSKNNLTGPIPIAIAKLTNLQNVDLSFNSLT 525 (936)
Q Consensus 489 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 525 (936)
+|+.|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3444444444444333344444445555555555443
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.56 E-value=0.0055 Score=66.28 Aligned_cols=68 Identities=10% Similarity=0.040 Sum_probs=43.8
Q ss_pred cccCceEEEEEEeCCCcEEEEEEeeccCccchHHHHHHHHHHHHcCC---CCCcceeeeE------EEeCCeeEEEEEec
Q 002321 699 GRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR---HPNLVTLEGY------YWTQSLQLLIYEFV 769 (936)
Q Consensus 699 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~------~~~~~~~~lv~e~~ 769 (936)
|.|....||+....+| .+++|+...... .+|+.+++.+. -+.+++++.. ....+..+++|+|+
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~-------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i 103 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD-------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFI 103 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC-------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc-------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEecc
Confidence 4455678999987766 899998765431 34555555552 1224444432 23456778999999
Q ss_pred CCCCh
Q 002321 770 SGGSL 774 (936)
Q Consensus 770 ~~g~L 774 (936)
+|..+
T Consensus 104 ~G~~~ 108 (339)
T 3i1a_A 104 HAPNG 108 (339)
T ss_dssp CCCBT
T ss_pred CCCcC
Confidence 98765
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.46 E-value=0.0032 Score=69.14 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=43.4
Q ss_pred cccccCceEEEEEEeCC---------CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCC-cceeeeEEEeCCeeEEEE
Q 002321 697 ELGRGGFGAVYRTVLRD---------GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPN-LVTLEGYYWTQSLQLLIY 766 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 766 (936)
.++.|..-.+|+....+ ++.+++|+...... ...+..+|.++++.+.... +.++++.. . .++||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 57778888999988653 26888998754211 1112467888888874333 44565443 2 37899
Q ss_pred EecCCCCh
Q 002321 767 EFVSGGSL 774 (936)
Q Consensus 767 e~~~~g~L 774 (936)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.88 E-value=0.018 Score=64.59 Aligned_cols=73 Identities=16% Similarity=0.083 Sum_probs=46.9
Q ss_pred CcccccCceEEEEEEeCC-CcEEEEEEeeccCccchHHHHHHHHHHHHcCCCCCc-ceeeeEEEeCCeeEEEEEecCCCC
Q 002321 696 CELGRGGFGAVYRTVLRD-GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVRHPNL-VTLEGYYWTQSLQLLIYEFVSGGS 773 (936)
Q Consensus 696 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~ 773 (936)
+.|+.|-...+|++...+ +..+++|+..... ...-+..+|..+++.+...++ .++++++. + .+||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C--CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 357788889999998764 4788999874321 111123689999998865444 45666652 2 46999998755
Q ss_pred h
Q 002321 774 L 774 (936)
Q Consensus 774 L 774 (936)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.41 E-value=0.027 Score=61.72 Aligned_cols=139 Identities=13% Similarity=0.099 Sum_probs=79.1
Q ss_pred cccccCceEEEEEEeCC--------CcEEEEEEeeccCcc----------chH-------HHHHHHHHHHHcCC-CCCcc
Q 002321 697 ELGRGGFGAVYRTVLRD--------GRPVAIKKLTVSSLV----------KSQ-------EDFEREVKKLGKVR-HPNLV 750 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~~~-------~~~~~E~~~l~~l~-h~niv 750 (936)
.|..|-...+|++...+ ++.|.+++.-..... -++ +....|..+++.+. +.-..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 35556677888887653 367888887332110 001 12335888888884 44455
Q ss_pred eeeeEEEeCCeeEEEEEecCCCChhh--hh---------------hccC--CCCCCC--HHHHHHHHHHHH---------
Q 002321 751 TLEGYYWTQSLQLLIYEFVSGGSLHK--HL---------------HEGS--GGNFLS--WNERFNVIQGTA--------- 800 (936)
Q Consensus 751 ~l~~~~~~~~~~~lv~e~~~~g~L~~--~l---------------~~~~--~~~~~~--~~~~~~i~~~i~--------- 800 (936)
++++++.. .+|+||++|-+|.. +. +... ...... +....++..++.
T Consensus 139 kl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 66666532 38999999755521 10 1110 011122 223333433221
Q ss_pred -------------HHHH----HHHhC----CcccCCCCCCCEEEcCC------CCeEEeeccCccc
Q 002321 801 -------------KSLA----HLHQS----NIIHYNIKSSNVLIDGS------GEPKVGDYGLARL 839 (936)
Q Consensus 801 -------------~al~----~LH~~----~ivH~Dlkp~NIll~~~------~~~kl~Dfg~a~~ 839 (936)
..++ ++... .++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23222 48999999999999887 7899999998764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.90 E-value=0.029 Score=62.11 Aligned_cols=72 Identities=11% Similarity=0.081 Sum_probs=46.4
Q ss_pred cccccCceEEEEEEeCC--------CcEEEEEEeeccCccchHHHHHHHHHHHHcCC-CCCcceeeeEEEeCCeeEEEEE
Q 002321 697 ELGRGGFGAVYRTVLRD--------GRPVAIKKLTVSSLVKSQEDFEREVKKLGKVR-HPNLVTLEGYYWTQSLQLLIYE 767 (936)
Q Consensus 697 ~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 767 (936)
.+..|-...+|+....+ ++.|++|+..... ...-+..+|.++++.+. +.-..++++.+ . .+.|||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 46667778899988653 5789999874321 11123467888888884 33344555433 2 278999
Q ss_pred ecCCCCh
Q 002321 768 FVSGGSL 774 (936)
Q Consensus 768 ~~~~g~L 774 (936)
|++|..+
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=92.04 E-value=0.47 Score=46.44 Aligned_cols=102 Identities=10% Similarity=0.048 Sum_probs=65.9
Q ss_pred CChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCCCCEEEcCCCCeEEeeccCccccCCCccccccc
Q 002321 772 GSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQ-SNIIHYNIKSSNVLIDGSGEPKVGDYGLARLLPMLDRYVLSS 850 (936)
Q Consensus 772 g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 850 (936)
-+|.+.+.... .++++.++|.++.|.+.+|.-.-. +.-..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 37888887643 459999999999999999877621 1112333456889999999988764 1110
Q ss_pred cccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCC
Q 002321 851 KIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRP 892 (936)
Q Consensus 851 ~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~P 892 (936)
.....+.|||... ...+.+.=|||+|+++|.-+-=..|
T Consensus 98 --~~~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS--SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122367888762 3457888999999999988863333
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.57 E-value=0.75 Score=50.56 Aligned_cols=29 Identities=14% Similarity=0.288 Sum_probs=24.9
Q ss_pred cccCCCCCCCEEE------cCCCCeEEeeccCccc
Q 002321 811 IIHYNIKSSNVLI------DGSGEPKVGDYGLARL 839 (936)
Q Consensus 811 ivH~Dlkp~NIll------~~~~~~kl~Dfg~a~~ 839 (936)
++|+|+.+.||++ ++++.++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6799999999999 4567899999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.61 E-value=1.6 Score=42.66 Aligned_cols=117 Identities=10% Similarity=0.143 Sum_probs=76.9
Q ss_pred CCCCcceeeeEEEeCCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCCCCEEEc
Q 002321 745 RHPNLVTLEGYYWTQSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLAHLHQSNIIHYNIKSSNVLID 824 (936)
Q Consensus 745 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ivH~Dlkp~NIll~ 824 (936)
.||++++. .+-.+.+...+.++.-+ +...+-.-. ..+..++++++..|+....+++.+ +|--++|+||+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~~r--~tf~L~P~NL~f~ 113 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNRTR--YTFVLAPDELFFT 113 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGGSS--EECCCSGGGEEEC
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhcCc--eEEEEecceEEEc
Confidence 57888866 46666665555444433 333332211 178899999999999888555433 6677899999999
Q ss_pred CCCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCc
Q 002321 825 GSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLST 895 (936)
Q Consensus 825 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~ 895 (936)
.++.+++.=.|+... ++|.. .+...=.-.+=+++..+++++..|..
T Consensus 114 ~~~~p~i~~RGik~~-------------------l~P~~------~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 114 RDGLPIAKTRGLQNV-------------------VDPLP------VSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp TTSCEEESCCEETTT-------------------BSCCC------CCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred CCCCEEEEEccCccC-------------------CCCCC------CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999987765432 23321 12222233577888999999988865
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.32 E-value=2.7 Score=41.25 Aligned_cols=116 Identities=11% Similarity=0.113 Sum_probs=75.5
Q ss_pred CCCCcceeeeEEEeCCeeEEEEEecCCCChhhhhhccCCCCCCCHHHHHHHHHHHHHHHH-HHHhCCcccCCCCCCCEEE
Q 002321 745 RHPNLVTLEGYYWTQSLQLLIYEFVSGGSLHKHLHEGSGGNFLSWNERFNVIQGTAKSLA-HLHQSNIIHYNIKSSNVLI 823 (936)
Q Consensus 745 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i~~al~-~LH~~~ivH~Dlkp~NIll 823 (936)
.||++ -..+-.+.+...+.++.-+++.=...++. ++..++++++..++.... +++. -+|--++|+||++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~------~~~~eKlrll~nl~~L~~~~~~~--r~tf~l~P~NL~f 117 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK------TTLLSRIRAAIHLVSKVKHHSAR--RLIFIVCPENLMF 117 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT------SCHHHHHHHHHHHHHHHSSCCSS--SEECCCCGGGEEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh------cCHHHHHHHHHHHHHHHHHhhhC--ceeEEEeCceEEE
Confidence 57777 34455666766666665534333334433 788999999998888766 5443 4677789999999
Q ss_pred cCCCCeEEeeccCccccCCCccccccccccCcccccCcccccCcccCCchhhHHHHHHHHHHHHcCCCCCCc
Q 002321 824 DGSGEPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITDKCDVYGFGVLVLEVVTGKRPLST 895 (936)
Q Consensus 824 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwSlG~~l~el~~g~~Pf~~ 895 (936)
|.++.+++.-.|+-. -++|... +...=.-.+=|++..++.++..|++
T Consensus 118 ~~~~~p~i~hRGi~~-------------------~lpP~e~------~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 118 NRALEPFFLHVGVKE-------------------SLPPDEW------DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp CTTCCEEESCCEETT-------------------TBSSCSC------CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred eCCCcEEEEEcCCcc-------------------cCCCCCC------CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999998777543 2334322 1111233467778888888877754
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.67 E-value=0.31 Score=54.74 Aligned_cols=62 Identities=10% Similarity=0.098 Sum_probs=18.5
Q ss_pred CCCcccccCceEEEEEEeCC-CcEEEE------EEeeccCccc-hHHHHHHHHHHHHcCCCCCcceeeeEEEe
Q 002321 694 KDCELGRGGFGAVYRTVLRD-GRPVAI------KKLTVSSLVK-SQEDFEREVKKLGKVRHPNLVTLEGYYWT 758 (936)
Q Consensus 694 ~~~~iG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 758 (936)
..+++| ||+||+|.+.. ..+||| |..+.....+ ....+.+|..+++..+|+|+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 344576 99999999864 468898 7765433332 23568889999999999999999888753
No 451
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=67.30 E-value=8.6 Score=28.93 Aligned_cols=29 Identities=17% Similarity=0.187 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhheeecccc
Q 002321 619 AIIAIGAAAVIVIGVIAITVLNLRVRSST 647 (936)
Q Consensus 619 ~~i~~~~~~~~~~~i~~~~~~~~~~r~~~ 647 (936)
++++.+++.+++++..+++.+++++|+++
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrq 40 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQ 40 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSS
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34555555555555555545555555544
No 452
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=54.71 E-value=1.1e+02 Score=34.79 Aligned_cols=84 Identities=13% Similarity=0.068 Sum_probs=51.4
Q ss_pred ceeeeEEEeCCeeEEEEEecCCCChhhhhhcc----------CCCC----CCCHHHHHHHHHHHH--HHHHHHHhCCccc
Q 002321 750 VTLEGYYWTQSLQLLIYEFVSGGSLHKHLHEG----------SGGN----FLSWNERFNVIQGTA--KSLAHLHQSNIIH 813 (936)
Q Consensus 750 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----------~~~~----~~~~~~~~~i~~~i~--~al~~LH~~~ivH 813 (936)
++.|.+........+ .|++++.++.+.+.+. .... ...+..+..+++.+| ..+.|+=+-
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 445556655555454 5888776655554321 1111 123445555555544 345555444
Q ss_pred CCCCCCCEEEcCCCCeEEeeccCcc
Q 002321 814 YNIKSSNVLIDGSGEPKVGDYGLAR 838 (936)
Q Consensus 814 ~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (936)
+|=+++|||++.+|++.=+|||..-
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4778899999999999999999873
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=54.62 E-value=19 Score=30.23 Aligned_cols=43 Identities=23% Similarity=0.344 Sum_probs=17.9
Q ss_pred ccCcCCCchhhcCCCcEEEccCcccccccchhhhhcCCCCcEEEc
Q 002321 112 LTGSISPNLAKLQNLRVIDLSGNSLSGSIPDEFFKQCGSLRVISL 156 (936)
Q Consensus 112 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~i~~~~f~~l~~L~~L~L 156 (936)
++.+-..+|.++++|+.+.|-.+ ++ .|...+|.++.+|+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEE
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEE
Confidence 33333444444455544444432 22 233344444444444443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.60 E-value=37 Score=28.49 Aligned_cols=45 Identities=11% Similarity=-0.006 Sum_probs=22.3
Q ss_pred ccCCCCCCCCCCCCCCEEecCCCCCCCCCccCccCCCCcceeeccc
Q 002321 185 FSSPLPLGIWGLSALRTLDLSDNLLEGEIPKGVESLKNLRVINLSK 230 (936)
Q Consensus 185 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (936)
++.+...+|.++.+|+.+.+-.+ ++.+....|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455555555555555543 2223444555555555555544
No 455
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=44.34 E-value=1.5e+02 Score=34.46 Aligned_cols=83 Identities=17% Similarity=0.071 Sum_probs=49.3
Q ss_pred eeeeEEEeCCeeEEEEEecCCCChhhhhhccC----------CCC--C--CCHHHHHHHHHHHH--HHHHHHHhCCcccC
Q 002321 751 TLEGYYWTQSLQLLIYEFVSGGSLHKHLHEGS----------GGN--F--LSWNERFNVIQGTA--KSLAHLHQSNIIHY 814 (936)
Q Consensus 751 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~--~--~~~~~~~~i~~~i~--~al~~LH~~~ivH~ 814 (936)
+.|.+........+ .|+++..++.+++.+.+ ... . +....+..+++.+| ..+.|+=.- +
T Consensus 477 ~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGl----G 551 (696)
T 2x6h_A 477 TPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGV----G 551 (696)
T ss_dssp CCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTC----C
T ss_pred eccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHccC----C
Confidence 34555554444444 47777666666554321 111 1 12233444555444 334455433 5
Q ss_pred CCCCCCEEEcCCCCeEEeeccCcc
Q 002321 815 NIKSSNVLIDGSGEPKVGDYGLAR 838 (936)
Q Consensus 815 Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (936)
|=+++|||++.+|++.=+|||.+-
T Consensus 552 DRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 552 DRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCcceEEeCCCCEEEEeehhhh
Confidence 889999999999999999999874
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=42.07 E-value=28 Score=23.33 Aligned_cols=6 Identities=33% Similarity=0.323 Sum_probs=2.2
Q ss_pred HHHHHH
Q 002321 620 IIAIGA 625 (936)
Q Consensus 620 ~i~~~~ 625 (936)
+.++++
T Consensus 13 IAGiVv 18 (38)
T 2k1k_A 13 IVAVIF 18 (38)
T ss_dssp HHHHHH
T ss_pred eeeeeh
Confidence 333333
No 457
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=39.75 E-value=1.5e+02 Score=36.25 Aligned_cols=42 Identities=14% Similarity=0.074 Sum_probs=30.2
Q ss_pred HHHHHHHH--HHHHHHHhCCcccCCCCCCCEEEcCCCCeEEeeccCcc
Q 002321 793 FNVIQGTA--KSLAHLHQSNIIHYNIKSSNVLIDGSGEPKVGDYGLAR 838 (936)
Q Consensus 793 ~~i~~~i~--~al~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (936)
..+++.+| ..+.|+=+- +|=++.|||++.+|++.=+|||.+-
T Consensus 918 ~nF~~S~A~ysvv~YiLgi----gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 918 DLFTRSCAGYCVATFILGI----GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp HHHHHHHHHHHHHHHHHTC----CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHhhhhhheEEEEee----cCCCCcceEEeCCCCEEEEeehhhh
Confidence 34555444 344455443 5778999999999999999999873
No 458
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=36.95 E-value=23 Score=24.60 Aligned_cols=7 Identities=0% Similarity=-0.315 Sum_probs=2.6
Q ss_pred HHHHhhh
Q 002321 634 IAITVLN 640 (936)
Q Consensus 634 ~~~~~~~ 640 (936)
+.+.--+
T Consensus 32 ~~~~RRR 38 (44)
T 2jwa_A 32 GILIKRR 38 (44)
T ss_dssp HHHHHHH
T ss_pred Hhheehh
Confidence 3333333
No 459
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=33.63 E-value=1.1e+02 Score=21.32 Aligned_cols=13 Identities=0% Similarity=-0.235 Sum_probs=5.4
Q ss_pred HHHHHHhhheeec
Q 002321 632 GVIAITVLNLRVR 644 (936)
Q Consensus 632 ~i~~~~~~~~~~r 644 (936)
++..+...+++++
T Consensus 29 ~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 29 TFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHTTCSSC
T ss_pred HHHHHhhhhhhhh
Confidence 3334444444433
No 460
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=33.43 E-value=91 Score=37.75 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=22.5
Q ss_pred CCCCCCCEEEcCCCCeEEeeccCcc
Q 002321 814 YNIKSSNVLIDGSGEPKVGDYGLAR 838 (936)
Q Consensus 814 ~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (936)
+|=+++|||++.+|++.=+|||.+-
T Consensus 804 gDRH~~NILid~tG~v~HIDFG~~f 828 (961)
T 1e7u_A 804 GDRHNDNIMISETGNLFHIDFGHIL 828 (961)
T ss_dssp CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred cCCCCcceEEecCCCEEEEeehhhh
Confidence 6889999999999999999999874
No 461
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=24.73 E-value=1.6e+02 Score=19.67 Aligned_cols=7 Identities=14% Similarity=0.135 Sum_probs=2.8
Q ss_pred HHHHHHH
Q 002321 619 AIIAIGA 625 (936)
Q Consensus 619 ~~i~~~~ 625 (936)
++++.++
T Consensus 16 iVvG~v~ 22 (38)
T 2k1k_A 16 VIFGLLL 22 (38)
T ss_dssp HHHHHHH
T ss_pred eehHHHH
Confidence 3344433
No 462
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=24.11 E-value=24 Score=19.60 Aligned_cols=8 Identities=38% Similarity=1.385 Sum_probs=6.5
Q ss_pred CccceeEE
Q 002321 63 PCNWFGVK 70 (936)
Q Consensus 63 ~c~w~gv~ 70 (936)
.|+|.|..
T Consensus 7 acswrgle 14 (23)
T 3ox7_P 7 ACSWRGLE 14 (26)
T ss_pred ccccccch
Confidence 69999974
Done!