Query 002329
Match_columns 936
No_of_seqs 74 out of 76
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 21:56:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002329.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002329hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xag_B REST corepressor 1; ami 99.6 6.7E-17 2.3E-21 180.7 0.0 58 163-221 189-246 (482)
2 2crg_A Metastasis associated p 99.5 1.7E-14 5.8E-19 124.4 2.9 55 163-218 8-63 (70)
3 2yqk_A Arginine-glutamic acid 99.4 3.8E-14 1.3E-18 119.8 3.6 57 157-214 3-60 (63)
4 4a69_C Nuclear receptor corepr 99.1 1.9E-11 6.5E-16 110.9 2.5 52 163-215 43-94 (94)
5 2eqr_A N-COR1, N-COR, nuclear 98.8 8.1E-10 2.8E-14 92.6 2.7 49 163-212 12-60 (61)
6 2iw5_B Protein corest, REST co 98.1 7.1E-07 2.4E-11 92.5 2.6 52 162-214 132-183 (235)
7 2xag_B REST corepressor 1; ami 97.4 5.6E-05 1.9E-09 85.5 2.7 50 162-212 379-428 (482)
8 2yus_A SWI/SNF-related matrix- 96.6 0.0022 7.5E-08 56.6 4.9 55 159-214 14-68 (79)
9 1wgx_A KIAA1903 protein; MYB D 96.5 0.0013 4.5E-08 57.8 3.4 49 158-206 2-55 (73)
10 2cu7_A KIAA1915 protein; nucle 96.3 0.0024 8.1E-08 54.7 3.4 48 159-206 5-52 (72)
11 2yum_A ZZZ3 protein, zinc fing 95.6 0.0059 2E-07 52.4 3.0 47 159-205 4-56 (75)
12 2ltp_A Nuclear receptor corepr 94.6 0.002 6.7E-08 57.7 0.0 51 156-206 9-59 (89)
13 1x41_A Transcriptional adaptor 95.0 0.015 5.2E-07 48.2 3.4 48 159-206 4-52 (60)
14 2cqr_A RSGI RUH-043, DNAJ homo 94.4 0.019 6.5E-07 50.2 2.8 47 159-205 14-64 (73)
15 4eef_G F-HB80.4, designed hema 94.3 0.0096 3.3E-07 52.7 0.5 45 163-207 20-68 (74)
16 2d9a_A B-MYB, MYB-related prot 93.9 0.039 1.3E-06 45.4 3.4 48 159-206 4-52 (60)
17 2elk_A SPCC24B10.08C protein; 92.9 0.063 2.1E-06 44.4 3.2 43 163-205 9-53 (58)
18 1gv2_A C-MYB, MYB proto-oncoge 92.9 0.064 2.2E-06 48.2 3.5 51 156-206 49-99 (105)
19 2k9n_A MYB24; R2R3 domain, DNA 92.7 0.068 2.3E-06 48.6 3.4 51 156-206 46-96 (107)
20 2cqq_A RSGI RUH-037, DNAJ homo 92.2 0.089 3E-06 45.8 3.4 43 162-205 7-53 (72)
21 2dim_A Cell division cycle 5-l 91.5 0.15 5.1E-06 43.2 3.9 48 159-206 5-53 (70)
22 1guu_A C-MYB, MYB proto-oncoge 91.2 0.12 3.9E-06 41.3 2.7 43 163-205 3-46 (52)
23 1h8a_C AMV V-MYB, MYB transfor 91.1 0.13 4.6E-06 47.9 3.5 51 156-206 72-122 (128)
24 3osg_A MYB21; transcription-DN 90.6 0.13 4.4E-06 48.1 2.9 51 156-206 55-105 (126)
25 2cjj_A Radialis; plant develop 90.5 0.13 4.4E-06 46.9 2.7 44 163-206 8-55 (93)
26 1gvd_A MYB proto-oncogene prot 89.2 0.22 7.4E-06 39.8 2.8 43 163-205 3-46 (52)
27 3zqc_A MYB3; transcription-DNA 88.9 0.24 8.3E-06 46.4 3.3 58 155-212 46-103 (131)
28 1h89_C C-MYB, MYB proto-oncoge 87.4 0.36 1.2E-05 46.5 3.6 51 156-206 103-153 (159)
29 2llk_A Cyclin-D-binding MYB-li 86.6 0.46 1.6E-05 41.5 3.5 50 156-206 16-65 (73)
30 1w0t_A Telomeric repeat bindin 86.3 0.49 1.7E-05 38.1 3.2 41 164-204 3-46 (53)
31 1h8a_C AMV V-MYB, MYB transfor 86.2 0.56 1.9E-05 43.7 4.0 54 153-206 17-71 (128)
32 2din_A Cell division cycle 5-l 85.2 0.59 2E-05 39.1 3.3 50 156-206 2-51 (66)
33 1ity_A TRF1; helix-turn-helix, 84.6 0.7 2.4E-05 39.0 3.5 47 159-205 6-55 (69)
34 1x58_A Hypothetical protein 49 83.1 0.51 1.7E-05 40.6 2.1 43 163-205 8-53 (62)
35 3osg_A MYB21; transcription-DN 82.5 0.9 3.1E-05 42.4 3.7 48 159-206 7-54 (126)
36 4b4c_A Chromodomain-helicase-D 81.3 0.4 1.4E-05 47.7 0.9 48 158-205 2-54 (211)
37 1h89_C C-MYB, MYB proto-oncoge 81.1 1.2 4E-05 42.9 4.0 52 155-206 50-102 (159)
38 1gv2_A C-MYB, MYB proto-oncoge 80.4 1.1 3.9E-05 40.1 3.5 45 162-206 3-48 (105)
39 3sjm_A Telomeric repeat-bindin 74.8 1.7 5.8E-05 36.8 2.7 39 164-202 12-53 (64)
40 2k9n_A MYB24; R2R3 domain, DNA 70.4 2.5 8.5E-05 38.3 2.9 42 164-205 2-44 (107)
41 2ckx_A NGTRF1, telomere bindin 67.0 4 0.00014 36.4 3.5 40 165-204 2-46 (83)
42 3zqc_A MYB3; transcription-DNA 67.0 2.3 7.8E-05 39.9 2.0 43 164-206 3-46 (131)
43 2juh_A Telomere binding protei 54.5 15 0.00052 35.0 5.2 45 157-201 11-60 (121)
44 1ofc_X ISWI protein; nuclear p 52.6 4.7 0.00016 43.7 1.6 45 164-209 111-156 (304)
45 2aje_A Telomere repeat-binding 52.6 10 0.00035 35.3 3.7 41 161-201 11-56 (105)
46 2roh_A RTBP1, telomere binding 51.6 18 0.00062 34.5 5.2 43 159-201 27-74 (122)
47 1ofc_X ISWI protein; nuclear p 42.6 18 0.00063 39.2 4.2 32 159-190 208-243 (304)
48 3cs1_A Flagellar calcium-bindi 40.5 37 0.0013 32.7 5.7 47 241-287 32-81 (219)
49 3hm5_A DNA methyltransferase 1 39.4 15 0.00053 33.6 2.6 43 164-206 31-78 (93)
50 1tiz_A Calmodulin-related prot 34.8 34 0.0012 26.0 3.6 42 241-282 24-65 (67)
51 2y9y_A Imitation switch protei 34.5 14 0.00047 41.2 1.7 46 164-210 124-171 (374)
52 2ovk_B RLC, myosin regulatory 34.0 22 0.00075 31.5 2.7 43 239-282 106-148 (153)
53 4b4c_A Chromodomain-helicase-D 33.5 42 0.0014 33.2 4.9 32 159-190 130-162 (211)
54 3khe_A Calmodulin-like domain 32.6 32 0.0011 31.5 3.6 39 250-288 153-191 (191)
55 2kn2_A Calmodulin; S MAPK phos 31.7 49 0.0017 27.1 4.3 45 241-285 32-76 (92)
56 3pm8_A PFCDPK2, calcium-depend 31.3 30 0.001 32.9 3.3 44 240-283 40-86 (197)
57 3khe_A Calmodulin-like domain 31.2 30 0.001 31.6 3.2 44 240-283 22-69 (191)
58 3fwb_A Cell division control p 31.2 29 0.001 30.6 3.0 43 240-282 118-160 (161)
59 1avs_A Troponin C; muscle cont 30.0 60 0.002 26.7 4.5 44 241-284 43-86 (90)
60 1ggw_A Protein (CDC4P); light 29.5 31 0.0011 30.0 2.8 38 243-281 101-138 (140)
61 3qrx_A Centrin; calcium-bindin 29.0 46 0.0016 29.8 3.9 45 238-282 121-165 (169)
62 3rm1_A Protein S100-B; alpha-h 29.0 68 0.0023 27.3 4.8 45 240-284 33-82 (92)
63 2opo_A Polcalcin CHE A 3; calc 27.8 49 0.0017 26.8 3.6 43 242-285 35-77 (86)
64 2joj_A Centrin protein; N-term 27.7 48 0.0016 26.1 3.4 43 242-284 31-73 (77)
65 3k21_A PFCDPK3, calcium-depend 26.7 70 0.0024 30.1 4.9 33 249-281 155-190 (191)
66 1qx2_A Vitamin D-dependent cal 26.1 44 0.0015 26.1 2.9 43 240-282 29-73 (76)
67 4ds7_A Calmodulin, CAM; protei 25.4 59 0.002 28.0 3.9 40 241-281 107-146 (147)
68 3j04_B Myosin regulatory light 25.3 41 0.0014 29.2 2.8 44 239-282 97-140 (143)
69 3k21_A PFCDPK3, calcium-depend 25.1 44 0.0015 31.5 3.2 44 240-283 35-81 (191)
70 3lqv_P Splicing factor 3B subu 24.5 28 0.00097 27.7 1.4 16 840-855 16-31 (39)
71 2kz2_A Calmodulin, CAM; TR2C, 24.3 79 0.0027 26.8 4.4 41 241-281 52-92 (94)
72 2aao_A CDPK, calcium-dependent 23.9 60 0.0021 28.9 3.7 44 240-283 10-56 (166)
73 5pal_A Parvalbumin; calcium-bi 23.8 66 0.0023 27.1 3.8 42 241-282 64-108 (109)
74 1ij5_A Plasmodial specific LAV 23.7 72 0.0025 33.5 4.8 47 238-285 90-152 (323)
75 1ggw_A Protein (CDC4P); light 23.5 75 0.0026 27.5 4.2 32 252-283 71-105 (140)
76 3li6_A Calcium-binding protein 23.3 26 0.0009 26.8 1.1 25 258-282 37-64 (66)
77 1exr_A Calmodulin; high resolu 23.2 74 0.0025 28.1 4.1 41 241-281 106-146 (148)
78 1dtl_A Cardiac troponin C; hel 22.9 57 0.0019 28.8 3.3 41 243-283 4-48 (161)
79 3ox6_A Calcium-binding protein 22.2 68 0.0023 27.8 3.6 40 241-280 111-151 (153)
80 2lvv_A Flagellar calcium-bindi 22.0 87 0.003 30.4 4.7 44 243-286 37-83 (226)
81 3nxa_A Protein S100-A16; S100 21.9 1.1E+02 0.0037 27.0 4.9 44 241-284 37-85 (100)
82 2lhi_A Calmodulin, serine/thre 21.8 82 0.0028 29.7 4.4 42 240-282 106-147 (176)
83 1k9u_A Polcalcin PHL P 7; poll 21.8 89 0.003 24.7 4.0 44 241-285 26-69 (78)
84 2mys_C Myosin; muscle protein, 21.4 73 0.0025 27.5 3.7 41 240-281 107-147 (149)
85 4iej_A DNA methyltransferase 1 21.4 45 0.0015 30.7 2.3 43 164-206 31-78 (93)
86 1top_A Troponin C; contractIle 21.3 93 0.0032 27.4 4.4 43 240-282 118-160 (162)
87 2ktg_A Calmodulin, putative; e 21.2 84 0.0029 25.2 3.8 17 267-283 63-79 (85)
88 3ll8_B Calcineurin subunit B t 21.0 98 0.0033 27.0 4.4 43 241-283 98-145 (155)
89 2xb0_X Chromo domain-containin 21.0 49 0.0017 35.3 2.8 43 163-205 3-50 (270)
90 2b1u_A Calmodulin-like protein 20.6 42 0.0014 25.9 1.7 37 242-281 30-69 (71)
91 3fs7_A Parvalbumin, thymic; ca 20.5 64 0.0022 27.2 3.1 33 249-281 76-108 (109)
92 1k8u_A S100A6, calcyclin, CACY 20.5 1E+02 0.0035 24.9 4.2 43 241-283 35-80 (90)
93 2lmt_A Calmodulin-related prot 20.3 82 0.0028 28.2 3.9 41 241-281 106-146 (148)
No 1
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=99.60 E-value=6.7e-17 Score=180.74 Aligned_cols=58 Identities=22% Similarity=0.544 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeeccccccCccCcchhccc
Q 002329 163 RDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYGEFYRSPAHRRWTDCR 221 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYgkf~ks~~y~rWS~cR 221 (936)
...||++|+..|+.||++|||||++|++||++|+++|||.|||+ |+|+..|..|.+=.
T Consensus 189 ~d~WT~eE~~lFe~al~~yGKdF~~I~~~lp~Ksv~e~V~yYY~-WKKt~~yk~l~~~~ 246 (482)
T 2xag_B 189 PDEWTVEDKVLFEQAFSFHGKTFHRIQQMLPDKSIASLVKFYYS-WKKTRTKTSVMDRH 246 (482)
T ss_dssp -----------------------------------------------------------
T ss_pred ccccCHHHHHHHHHHHHHcCccHHHHHHHcCCCCHHHHHHHhcc-ccccccHHHHHHHH
Confidence 36999999999999999999999999999999999999999999 99999999997743
No 2
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=99.45 E-value=1.7e-14 Score=124.43 Aligned_cols=55 Identities=25% Similarity=0.501 Sum_probs=53.2
Q ss_pred CCCCCHHHHHHHHHHHHHhccchHHHHh-hhccccccchheeeccccccCccCcchh
Q 002329 163 RDPWKDSEKDIFLLGLYIFGKNFFQIKR-FIETKEMGDILSFYYGEFYRSPAHRRWT 218 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifGKNf~~Ikk-fv~~K~~gEil~FYYgkf~ks~~y~rWS 218 (936)
...||++|.+.|+.||.+|||||++|++ ||++|+++||+.|||. |+|+++|.+|.
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~-wKkt~~y~q~~ 63 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYM-WKTTDRYVQQK 63 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSCHHHHHHTTCSSSCHHHHHHHHHH-HHTCCSSCSCC
T ss_pred CCCCCHHHHHHHHHHHHHhCccHHHHHHHHcCCCCHHHHHHHHHh-hcCCchHHHHH
Confidence 3789999999999999999999999999 9999999999999997 99999999997
No 3
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=3.8e-14 Score=119.79 Aligned_cols=57 Identities=30% Similarity=0.699 Sum_probs=53.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHh-hhccccccchheeeccccccCccC
Q 002329 157 PVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKR-FIETKEMGDILSFYYGEFYRSPAH 214 (936)
Q Consensus 157 pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikk-fv~~K~~gEil~FYYgkf~ks~~y 214 (936)
-+|......||++|.+.|+.||.+|||||++|++ ||++|+++||+.|||+ |+|++++
T Consensus 3 ~~p~~~~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~-wKkt~~~ 60 (63)
T 2yqk_A 3 SGSSGIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYY-WKKTSGP 60 (63)
T ss_dssp CCCCCCCCSCCHHHHHHHHHHHHHTCSCHHHHHHHSCTTSCHHHHHHHHHH-HHCSSCC
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHhCccHHHHHHHHcCCCcHHHHHHHHhc-ccCCCCC
Confidence 4688899999999999999999999999999999 9999999999999998 9998865
No 4
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=99.10 E-value=1.9e-11 Score=110.90 Aligned_cols=52 Identities=25% Similarity=0.443 Sum_probs=46.5
Q ss_pred CCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeeccccccCccCc
Q 002329 163 RDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYGEFYRSPAHR 215 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYgkf~ks~~y~ 215 (936)
.+.||++|.+.|+.||.+|||||++|+.+|++|+++||+.|||. |+|+.+|.
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l~~Kt~~~cV~~YY~-~Kk~~~Yk 94 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYL-TKKNENYK 94 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTCHHHHHHTCTTCCHHHHHHHHHH-HSCC----
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHHhc-cccCcCCC
Confidence 37899999999999999999999999999999999999999999 99999884
No 5
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.85 E-value=8.1e-10 Score=92.56 Aligned_cols=49 Identities=31% Similarity=0.492 Sum_probs=46.0
Q ss_pred CCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeeccccccCc
Q 002329 163 RDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYGEFYRSP 212 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYgkf~ks~ 212 (936)
...||++|.+.|+.||..|||+|..|.++|++||+++|+.|||. |+|++
T Consensus 12 ~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l~~rt~~~~v~~Yy~-~Kk~~ 60 (61)
T 2eqr_A 12 MNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYL-TKKNE 60 (61)
T ss_dssp CCSCCHHHHHHHHHHHHHSTTCHHHHHHHCTTSCHHHHHHHHHH-HTCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHHH-hcCCC
Confidence 37899999999999999999999999999999999999999998 77764
No 6
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=98.13 E-value=7.1e-07 Score=92.49 Aligned_cols=52 Identities=17% Similarity=0.380 Sum_probs=46.2
Q ss_pred CCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeeccccccCccC
Q 002329 162 LRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYGEFYRSPAH 214 (936)
Q Consensus 162 ~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYgkf~ks~~y 214 (936)
....||++|...|+.||..|||||..|.++|++||+.+|..|||- |++.-.+
T Consensus 132 ~s~~WTeEE~~lFleAl~kYGKDW~~IAk~VgTKT~~QcKnfY~~-~kKRlnL 183 (235)
T 2iw5_B 132 CNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVN-YRRRFNI 183 (235)
T ss_dssp CCSSCCHHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHH-TTTTTTH
T ss_pred cCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHH-HHHHhhH
Confidence 347999999999999999999999999999999999999999994 6654433
No 7
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=97.38 E-value=5.6e-05 Score=85.52 Aligned_cols=50 Identities=18% Similarity=0.415 Sum_probs=45.1
Q ss_pred CCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeeccccccCc
Q 002329 162 LRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYGEFYRSP 212 (936)
Q Consensus 162 ~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYgkf~ks~ 212 (936)
....||++|...|+.||..|||||..|-++|++|++..|.+||| +|++.-
T Consensus 379 ~~~~WT~eE~~~f~~al~~yGkdw~~IA~~VgTKT~~Qvk~fy~-~~kkr~ 428 (482)
T 2xag_B 379 CNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFV-NYRRRF 428 (482)
T ss_dssp CCSCCCHHHHHHHHHHHHHHTTCHHHHHHHHSSCCHHHHHHHHH-HTTTTT
T ss_pred cCCCCCHHHHHHHHHHHHHHCcCHHHHHHHhCCCCHHHHHHHHH-HHHHHh
Confidence 35899999999999999999999999999999999999999998 355543
No 8
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=96.56 E-value=0.0022 Score=56.61 Aligned_cols=55 Identities=7% Similarity=0.234 Sum_probs=47.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeeccccccCccC
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYGEFYRSPAH 214 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYgkf~ks~~y 214 (936)
+......||++|-..|+.++-.||.|+..|-++|++||..+|..+|.- +|-.+.|
T Consensus 14 ~~~~~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v~~RT~~qcr~r~~~-~~i~d~~ 68 (79)
T 2yus_A 14 GASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLR-LPIEDPY 68 (79)
T ss_dssp SSCCSCCCCHHHHHHHHHHHHHSSSCHHHHHHHHSSCCHHHHHHHHTT-SCCCCSS
T ss_pred ccccCCCcCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHHH-hcccccc
Confidence 334567999999999999999999999999999999999999998875 6665554
No 9
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=96.55 E-value=0.0013 Score=57.80 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=43.5
Q ss_pred CCCCCC-CCCCHHHHHHHHHHHHHhcc----chHHHHhhhccccccchheeecc
Q 002329 158 VPGFLR-DPWKDSEKDIFLLGLYIFGK----NFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 158 vPg~~~-~~Wse~E~~~F~lGL~ifGK----Nf~~Ikkfv~~K~~gEil~FYYg 206 (936)
+||+.. ..||++|.+.|+.+|-+|++ ++..|-..|+.||..||+..|..
T Consensus 2 ~~~~~~~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~ 55 (73)
T 1wgx_A 2 SSGSSGDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYME 55 (73)
T ss_dssp CCCCCSSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHH
Confidence 466655 78999999999999999998 48899999999999999988775
No 10
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=96.29 E-value=0.0024 Score=54.73 Aligned_cols=48 Identities=23% Similarity=0.423 Sum_probs=44.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
|..-...||++|-..|+.++..||+++..|.++|++||-.+|-.+|+.
T Consensus 5 p~~~~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~r~~~ 52 (72)
T 2cu7_A 5 SSGYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQ 52 (72)
T ss_dssp CSSCCCCCCHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHH
Confidence 555668999999999999999999999999999999999999999875
No 11
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.62 E-value=0.0059 Score=52.37 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=43.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhc------cchHHHHhhhccccccchheeec
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFG------KNFFQIKRFIETKEMGDILSFYY 205 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifG------KNf~~Ikkfv~~K~~gEil~FYY 205 (936)
|+.....||++|-+.|+.++..|| +++..|-++|++||.-+|...|.
T Consensus 4 p~~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~ 56 (75)
T 2yum_A 4 GSSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQ 56 (75)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHH
Confidence 666778999999999999999999 89999999999999999998884
No 12
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=94.61 E-value=0.002 Score=57.71 Aligned_cols=51 Identities=24% Similarity=0.447 Sum_probs=46.6
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 156 SPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 156 ~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
.+-|+.....||++|-..|+.++..||+++..|.++|+++|..+|-.+||.
T Consensus 9 ~~~p~~~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l~gRt~~q~k~r~~~ 59 (89)
T 2ltp_A 9 SGRENLYFQGWTEEEMGTAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFN 59 (89)
Confidence 345666778999999999999999999999999999999999999999985
No 13
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=95.01 E-value=0.015 Score=48.21 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=43.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhc-cchHHHHhhhccccccchheeecc
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFG-KNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
|......||.+|-+.++.++..|| +|...|-++|++||-.+|...|+-
T Consensus 4 ~~~~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~r~~~ 52 (60)
T 1x41_A 4 GSSGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMK 52 (60)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHhCCCCHHHHHHHHHH
Confidence 455668999999999999999999 799999999999999999988764
No 14
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=94.44 E-value=0.019 Score=50.19 Aligned_cols=47 Identities=19% Similarity=0.415 Sum_probs=42.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhc----cchHHHHhhhccccccchheeec
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFG----KNFFQIKRFIETKEMGDILSFYY 205 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifG----KNf~~Ikkfv~~K~~gEil~FYY 205 (936)
|......||.+|-+.|+.+|-+|| .++..|-++|+.||..+|...|.
T Consensus 14 ~~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~ 64 (73)
T 2cqr_A 14 ARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYK 64 (73)
T ss_dssp TTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHH
Confidence 344567899999999999999999 68999999999999999998876
No 15
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=94.25 E-value=0.0096 Score=52.69 Aligned_cols=45 Identities=22% Similarity=0.424 Sum_probs=39.0
Q ss_pred CCCCCHHHHHHHHHHHHHhccc----hHHHHhhhccccccchheeeccc
Q 002329 163 RDPWKDSEKDIFLLGLYIFGKN----FFQIKRFIETKEMGDILSFYYGE 207 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifGKN----f~~Ikkfv~~K~~gEil~FYYgk 207 (936)
...||.+|-+.|+.+|-+|+++ +..|-+.|+.||+.||...|=.+
T Consensus 20 s~~WT~eE~K~FE~ALa~yp~~tpdRWekIA~~VpGKT~eEVk~hY~~~ 68 (74)
T 4eef_G 20 GRPWKFSENIAFEIALSFTNKDTPDRWKKVAQYVKGRTPEEVKKHYELE 68 (74)
T ss_dssp --CCCTTHHHHHHHHTSSSCSSCCSSSTTTGGGSCSSCHHHHHGGGC--
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 3689999999999999999995 88999999999999999988653
No 16
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=93.86 E-value=0.039 Score=45.39 Aligned_cols=48 Identities=8% Similarity=0.112 Sum_probs=43.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhc-cchHHHHhhhccccccchheeecc
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFG-KNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
|+.....||.+|-+.++.++..|| +|+..|.++|+.++-.+|-..|+-
T Consensus 4 p~~~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~ 52 (60)
T 2d9a_A 4 GSSGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQCQYRWLR 52 (60)
T ss_dssp CCCCCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHCSSSCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHccCCCHHHHHHHHHH
Confidence 566678999999999999999999 699999999999999999888763
No 17
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=92.91 E-value=0.063 Score=44.35 Aligned_cols=43 Identities=14% Similarity=0.371 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHHHHHHhc-cchHHHHhhhc-cccccchheeec
Q 002329 163 RDPWKDSEKDIFLLGLYIFG-KNFFQIKRFIE-TKEMGDILSFYY 205 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~-~K~~gEil~FYY 205 (936)
...||.+|-..++.++-.|| .|+..|-++|+ +|+-.+|-..|.
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~~~~Rt~~qcr~r~~ 53 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYL 53 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTCHHHHHHHHCSSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHHCCCCCHHHHHHHHH
Confidence 56899999999999999999 89999999999 999999987765
No 18
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=92.90 E-value=0.064 Score=48.24 Aligned_cols=51 Identities=14% Similarity=0.324 Sum_probs=46.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 156 SPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 156 ~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
++-|+.....||++|-..++.++-.||.++..|.++|+.+|-.+|-.+|+.
T Consensus 49 ~l~p~~~~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~l~gRt~~~~k~rw~~ 99 (105)
T 1gv2_A 49 HLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNS 99 (105)
T ss_dssp TTCCCCCCCCCCHHHHHHHHHHHHHHSSCHHHHHTTCTTCCHHHHHHHHHH
T ss_pred ccCCcccccCCCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHHH
Confidence 455777789999999999999999999999999999999999999998875
No 19
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=92.66 E-value=0.068 Score=48.57 Aligned_cols=51 Identities=18% Similarity=0.367 Sum_probs=46.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 156 SPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 156 ~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
++-|+.-...||++|-..++.++..||.++..|.++|+.++--+|-.+|+.
T Consensus 46 ~L~p~i~~~~WT~eEd~~L~~~~~~~G~~W~~Ia~~l~gRt~~~~k~rw~~ 96 (107)
T 2k9n_A 46 YINPALRTDPWSPEEDMLLDQKYAEYGPKWNKISKFLKNRSDNNIRNRWMM 96 (107)
T ss_dssp HSSSCCTTCCCCHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHH
T ss_pred HHcccccccccCHHHHHHHHHHHHHhCcCHHHHHHHCCCCCHHHHHHHHHH
Confidence 455777789999999999999999999999999999999999999988875
No 20
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=92.23 E-value=0.089 Score=45.83 Aligned_cols=43 Identities=9% Similarity=0.159 Sum_probs=37.2
Q ss_pred CCCCCCHHHHHHHHHHHHHhc----cchHHHHhhhccccccchheeec
Q 002329 162 LRDPWKDSEKDIFLLGLYIFG----KNFFQIKRFIETKEMGDILSFYY 205 (936)
Q Consensus 162 ~~~~Wse~E~~~F~lGL~ifG----KNf~~Ikkfv~~K~~gEil~FYY 205 (936)
....||.+|-+.|+.+|-+|+ ..+..|-++| .||+.||..+|-
T Consensus 7 ~~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l-gRt~~eV~~~y~ 53 (72)
T 2cqq_A 7 GAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAK 53 (72)
T ss_dssp CCCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-TSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh-CCCHHHHHHHHH
Confidence 456899999999999999998 4588899988 699999997653
No 21
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.54 E-value=0.15 Score=43.21 Aligned_cols=48 Identities=15% Similarity=0.370 Sum_probs=43.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhc-cchHHHHhhhccccccchheeecc
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFG-KNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
|+.-...||.+|-+.++.++..|| +|...|-++|+.++-.+|-..|+.
T Consensus 5 ~~~k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l~~Rt~~qcr~Rw~~ 53 (70)
T 2dim_A 5 SSGKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYE 53 (70)
T ss_dssp SCSTTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHSTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHhcCCCHHHHHHHHHH
Confidence 445567999999999999999999 899999999999999999988765
No 22
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=91.19 E-value=0.12 Score=41.34 Aligned_cols=43 Identities=9% Similarity=0.166 Sum_probs=39.3
Q ss_pred CCCCCHHHHHHHHHHHHHhcc-chHHHHhhhccccccchheeec
Q 002329 163 RDPWKDSEKDIFLLGLYIFGK-NFFQIKRFIETKEMGDILSFYY 205 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv~~K~~gEil~FYY 205 (936)
...||.+|-..++.++-.||. |+..|.++|+.++-..|-..|+
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~ 46 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQ 46 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTSTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcCCCCHHHHHHHHH
Confidence 368999999999999999999 9999999999999999887765
No 23
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=91.06 E-value=0.13 Score=47.85 Aligned_cols=51 Identities=12% Similarity=0.318 Sum_probs=46.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 156 SPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 156 ~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
++-|+.....||++|-..++.++..||+++..|.++|+.+|-.+|-.+|+.
T Consensus 72 ~l~p~~~~~~WT~eEd~~L~~~~~~~G~~W~~Ia~~l~gRt~~~~k~r~~~ 122 (128)
T 1h8a_C 72 HLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNS 122 (128)
T ss_dssp TTCSSSCCSCCCHHHHHHHHHHHHHHCSCHHHHGGGSTTCCHHHHHHHHHT
T ss_pred hcccccccccCCHHHHHHHHHHHHHHCcCHHHHHHHCCCCCHHHHHHHHHH
Confidence 445777778999999999999999999999999999999999999998875
No 24
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=90.60 E-value=0.13 Score=48.09 Aligned_cols=51 Identities=16% Similarity=0.364 Sum_probs=46.0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 156 SPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 156 ~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
++-|+.-...||++|-+.++.++..||.++..|.++|+.++-.+|-..||.
T Consensus 55 ~l~p~~~~~~WT~eEd~~L~~~v~~~G~~W~~Ia~~l~gRt~~~~k~rw~~ 105 (126)
T 3osg_A 55 YLAPSISHTPWTAEEDALLVQKIQEYGRQWAIIAKFFPGRTDIHIKNRWVT 105 (126)
T ss_dssp HTSTTSCCSCCCHHHHHHHHHHHHHHCSCHHHHHTTSTTCCHHHHHHHHHH
T ss_pred hcccccccccCCHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHH
Confidence 445777778999999999999999999999999999999999999988874
No 25
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=90.48 E-value=0.13 Score=46.92 Aligned_cols=44 Identities=18% Similarity=0.412 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHHHHHHhc----cchHHHHhhhccccccchheeecc
Q 002329 163 RDPWKDSEKDIFLLGLYIFG----KNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifG----KNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
...||.+|-+.|+.+|-+|| ..+..|-++|+.||..||...|.-
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~ 55 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEI 55 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHH
Confidence 46899999999999999997 568999999999999999988764
No 26
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=89.23 E-value=0.22 Score=39.82 Aligned_cols=43 Identities=12% Similarity=0.281 Sum_probs=38.9
Q ss_pred CCCCCHHHHHHHHHHHHHhcc-chHHHHhhhccccccchheeec
Q 002329 163 RDPWKDSEKDIFLLGLYIFGK-NFFQIKRFIETKEMGDILSFYY 205 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv~~K~~gEil~FYY 205 (936)
...||.+|-..++.++-.||. |+..|.++|+.++-..|-..|+
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~ 46 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWH 46 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcChHHHHHHHcCCCCHHHHHHHHH
Confidence 368999999999999999995 8999999999999998887776
No 27
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=88.86 E-value=0.24 Score=46.45 Aligned_cols=58 Identities=12% Similarity=0.268 Sum_probs=50.2
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeeccccccCc
Q 002329 155 CSPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYGEFYRSP 212 (936)
Q Consensus 155 ~~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYgkf~ks~ 212 (936)
.++-|+.-...||.+|-..++.++..||.++..|.++|+.+|-..|-.+||..+.+.-
T Consensus 46 ~~l~p~~~~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~l~gRt~~~~k~rw~~~l~~~~ 103 (131)
T 3zqc_A 46 NHLDPAVVKHAWTPEEDETIFRNYLKLGSKWSVIAKLIPGRTDNAIKNRWNSSISKRI 103 (131)
T ss_dssp HHTSTTCCCSCCCHHHHHHHHHHHHHSCSCHHHHTTTSTTCCHHHHHHHHHHTTGGGC
T ss_pred hccCccccCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 3456777778999999999999999999999999999999999999999987554443
No 28
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=87.38 E-value=0.36 Score=46.46 Aligned_cols=51 Identities=14% Similarity=0.324 Sum_probs=46.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 156 SPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 156 ~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
++-|+.-...||++|-..++.++..||.++..|.++|+.+|-.+|-.+|+.
T Consensus 103 ~l~p~~~~~~WT~eEd~~L~~~~~~~g~~W~~Ia~~l~gRt~~~~knr~~~ 153 (159)
T 1h89_C 103 HLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNS 153 (159)
T ss_dssp TTCTTSCCSCCCHHHHHHHHHHHHHHCSCHHHHHTTSTTCCHHHHHHHHHT
T ss_pred HhCccccccCCChHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHH
Confidence 345777779999999999999999999999999999999999999998885
No 29
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=86.62 E-value=0.46 Score=41.55 Aligned_cols=50 Identities=6% Similarity=-0.096 Sum_probs=43.4
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 156 SPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 156 ~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
++=|......||++|-+.++.....||.++..|.++| .++--+|-.+|+.
T Consensus 16 ~ldP~i~k~~wT~EED~~L~~l~~~~G~kW~~IA~~l-gRt~~q~knRw~~ 65 (73)
T 2llk_A 16 FQGDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAAL-GRSASSVKDRCRL 65 (73)
T ss_dssp ---CCCCCCSSCHHHHHHHHHHHHHHSSCHHHHHHHH-TSCHHHHHHHHHH
T ss_pred ecCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHh-CCCHHHHHHHHHH
Confidence 4557777889999999999999999999999999988 9999999988874
No 30
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=86.34 E-value=0.49 Score=38.07 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHHHHHHhc-cchHHHHhhhc--cccccchheee
Q 002329 164 DPWKDSEKDIFLLGLYIFG-KNFFQIKRFIE--TKEMGDILSFY 204 (936)
Q Consensus 164 ~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~--~K~~gEil~FY 204 (936)
..||.+|-+.++.+.-.|| .|...|.++++ +++-.+|-..|
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw 46 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRW 46 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCCCCCCHHHHHHHH
Confidence 5899999999999999999 69999999988 78877776443
No 31
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=86.16 E-value=0.56 Score=43.68 Aligned_cols=54 Identities=11% Similarity=0.208 Sum_probs=44.0
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHhcc-chHHHHhhhccccccchheeecc
Q 002329 153 TSCSPVPGFLRDPWKDSEKDIFLLGLYIFGK-NFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 153 ~~~~pvPg~~~~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv~~K~~gEil~FYYg 206 (936)
=..++-|+.....||.+|-+.++.++-.||. |...|-++|+.++-..|-..|+.
T Consensus 17 w~~~l~p~~~k~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~ 71 (128)
T 1h8a_C 17 WQKVLNPELNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKGRIGKQCRERWHN 71 (128)
T ss_dssp -----CTTCCCSCCCHHHHHHHHHHHHHTCSCCHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHhhCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhcCCcHHHHHHHHHH
Confidence 3445668888899999999999999999995 79999999999999998876653
No 32
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.19 E-value=0.59 Score=39.09 Aligned_cols=50 Identities=16% Similarity=0.163 Sum_probs=42.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 156 SPVPGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 156 ~pvPg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
++-|..-...||.+|-..++...-.||.++..|.+ +..|+-.+|-..|+-
T Consensus 2 ~L~P~~~k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~gRt~~qcr~Rw~~ 51 (66)
T 2din_A 2 SSGSSGKKTEWSREEEEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLEHYEF 51 (66)
T ss_dssp CCSSSSSCCCCCHHHHHHHHHHHHHCTTCHHHHHH-HHSSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCCHHHHhc-ccCcCHHHHHHHHHH
Confidence 34577777899999999999999999999999999 556999999887763
No 33
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=84.62 E-value=0.7 Score=39.05 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=40.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhc-cchHHHHhhhc--cccccchheeec
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFG-KNFFQIKRFIE--TKEMGDILSFYY 205 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~--~K~~gEil~FYY 205 (936)
|......||.+|-..++.+.-.|| .+...|.++++ .++-.+|-..|.
T Consensus 6 ~~~~r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~ 55 (69)
T 1ity_A 6 RARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWR 55 (69)
T ss_dssp CSSSCCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHH
Confidence 445668999999999999999999 69999999998 888888876554
No 34
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=83.13 E-value=0.51 Score=40.57 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=37.1
Q ss_pred CCCCCHHHHHHHHHHHHHhccchHHHHh---hhccccccchheeec
Q 002329 163 RDPWKDSEKDIFLLGLYIFGKNFFQIKR---FIETKEMGDILSFYY 205 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifGKNf~~Ikk---fv~~K~~gEil~FYY 205 (936)
...||++|.+..+.|.-.||++...|.+ |+..+|-=+|=.-|+
T Consensus 8 r~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f~~~RT~VdLKdk~r 53 (62)
T 1x58_A 8 RKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYH 53 (62)
T ss_dssp SSSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhHhHHHHHHhCCCccCcccchHHHHHH
Confidence 4789999999999999999999999994 888888777764443
No 35
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=82.51 E-value=0.9 Score=42.39 Aligned_cols=48 Identities=6% Similarity=0.113 Sum_probs=42.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccchHHHHhhhccccccchheeecc
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFGKNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
++.....||.+|-+.++.+...||.|+..|.++|++++-..|-..|+-
T Consensus 7 ~~~kk~~WT~eED~~L~~~v~~~G~~W~~Ia~~~~~Rt~~qcr~Rw~~ 54 (126)
T 3osg_A 7 KAAKKQKFTPEEDEMLKRAVAQHGSDWKMIAATFPNRNARQCRDRWKN 54 (126)
T ss_dssp CBCSSCCCCHHHHHHHHHHHHHHTTCHHHHHHTCTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHhh
Confidence 445567899999999999999999999999999999999999877663
No 36
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=81.26 E-value=0.4 Score=47.68 Aligned_cols=48 Identities=21% Similarity=0.199 Sum_probs=36.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhc---cchHHHHh--hhccccccchheeec
Q 002329 158 VPGFLRDPWKDSEKDIFLLGLYIFG---KNFFQIKR--FIETKEMGDILSFYY 205 (936)
Q Consensus 158 vPg~~~~~Wse~E~~~F~lGL~ifG---KNf~~Ikk--fv~~K~~gEil~FYY 205 (936)
+|--.-..||+.|++.|+.|+.-|| ..+-.|.+ -|..|+..||-.||-
T Consensus 2 ~p~~~~~~~t~~E~r~fira~~kfG~~~~r~~~I~~da~L~~Ks~~~v~~y~~ 54 (211)
T 4b4c_A 2 MPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGE 54 (211)
T ss_dssp ------CCSCHHHHHHHHHHHTTCSSGGGCHHHHHHHTTCTTSCHHHHHHHHH
T ss_pred CCcccCCCCCHHHHHHHHHHHHHHCCchhHHHHHHHHhccCCCCHHHHHHHHH
Confidence 4555668999999999999999999 55777776 577899999887665
No 37
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=81.15 E-value=1.2 Score=42.91 Aligned_cols=52 Identities=13% Similarity=0.268 Sum_probs=44.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHhc-cchHHHHhhhccccccchheeecc
Q 002329 155 CSPVPGFLRDPWKDSEKDIFLLGLYIFG-KNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 155 ~~pvPg~~~~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
.++-|+.....||.+|-..++.+.-.|| ++...|.++|+.++-.+|-..|+.
T Consensus 50 ~~l~p~~~~~~Wt~eEd~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~ 102 (159)
T 1h89_C 50 KVLNPELIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHN 102 (159)
T ss_dssp TTTCTTCCCSCCCHHHHHHHHHHHHHHCSCCHHHHHHTSTTCCHHHHHHHHHH
T ss_pred HccCCCcCCCCCChHHHHHHHHHHHHhCcccHHHHHHHcCCCCHHHHHHHHHH
Confidence 3456777789999999999999999999 579999999999999988876654
No 38
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=80.41 E-value=1.1 Score=40.09 Aligned_cols=45 Identities=11% Similarity=0.278 Sum_probs=39.5
Q ss_pred CCCCCCHHHHHHHHHHHHHhcc-chHHHHhhhccccccchheeecc
Q 002329 162 LRDPWKDSEKDIFLLGLYIFGK-NFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 162 ~~~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv~~K~~gEil~FYYg 206 (936)
....||.+|-+.++.++-.||. |+..|.++|+.++...|-..|.-
T Consensus 3 ~k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~ 48 (105)
T 1gv2_A 3 IKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHN 48 (105)
T ss_dssp CCSCCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCcHHHHhhhhcCCCHHHHHHHHHh
Confidence 3468999999999999999996 89999999999999998866653
No 39
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=74.78 E-value=1.7 Score=36.77 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHHHHHHhc-cchHHHHhhhc--cccccchhe
Q 002329 164 DPWKDSEKDIFLLGLYIFG-KNFFQIKRFIE--TKEMGDILS 202 (936)
Q Consensus 164 ~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~--~K~~gEil~ 202 (936)
..||++|-+.++.+...|| +|+..|.++++ .+|-.+|-.
T Consensus 12 ~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~ 53 (64)
T 3sjm_A 12 QKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKD 53 (64)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHH
Confidence 5799999999999999999 59999999644 777666653
No 40
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=70.42 E-value=2.5 Score=38.31 Aligned_cols=42 Identities=10% Similarity=0.174 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHHHHhcc-chHHHHhhhccccccchheeec
Q 002329 164 DPWKDSEKDIFLLGLYIFGK-NFFQIKRFIETKEMGDILSFYY 205 (936)
Q Consensus 164 ~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv~~K~~gEil~FYY 205 (936)
..||.+|-+.++.++-.||. |+..|-.+|++++-..|...|.
T Consensus 2 ~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~ 44 (107)
T 2k9n_A 2 VKFTEEEDLKLQQLVMRYGAKDWIRISQLMITRNPRQCRERWN 44 (107)
T ss_dssp CSSCHHHHHHHHHHHHHHCSSCHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHhhhcCCCCHHHHHHHHH
Confidence 36999999999999999995 9999999999999999886654
No 41
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=67.01 E-value=4 Score=36.39 Aligned_cols=40 Identities=13% Similarity=0.258 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHHHHHHhcc-chHHHHhh----hccccccchheee
Q 002329 165 PWKDSEKDIFLLGLYIFGK-NFFQIKRF----IETKEMGDILSFY 204 (936)
Q Consensus 165 ~Wse~E~~~F~lGL~ifGK-Nf~~Ikkf----v~~K~~gEil~FY 204 (936)
.||++|...++.|.-.||. +...|.+. +..+|-.+|-..|
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~~~RT~~~lKdrW 46 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKW 46 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCcHHHHHhhccccCCCCHHHHHHHH
Confidence 6999999999999999999 99999993 7888888887443
No 42
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=67.00 E-value=2.3 Score=39.86 Aligned_cols=43 Identities=16% Similarity=0.336 Sum_probs=38.7
Q ss_pred CCCCHHHHHHHHHHHHHhc-cchHHHHhhhccccccchheeecc
Q 002329 164 DPWKDSEKDIFLLGLYIFG-KNFFQIKRFIETKEMGDILSFYYG 206 (936)
Q Consensus 164 ~~Wse~E~~~F~lGL~ifG-KNf~~Ikkfv~~K~~gEil~FYYg 206 (936)
..||.+|-+.++.++..|| .|+..|-++|++++-..|...|+-
T Consensus 3 g~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~ 46 (131)
T 3zqc_A 3 GPFTEAEDDLIREYVKENGPQNWPRITSFLPNRSPKQCRERWFN 46 (131)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCCGGGGTTSCTTSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcCCHHHHHHHHCCCCHHHHHHHHhh
Confidence 4799999999999999999 799999999999999998876653
No 43
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=54.51 E-value=15 Score=35.02 Aligned_cols=45 Identities=13% Similarity=0.217 Sum_probs=37.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcc-chHHHHhhh----ccccccchh
Q 002329 157 PVPGFLRDPWKDSEKDIFLLGLYIFGK-NFFQIKRFI----ETKEMGDIL 201 (936)
Q Consensus 157 pvPg~~~~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv----~~K~~gEil 201 (936)
+-+......||.+|.+..+.|.-.||. ++..|.+.+ ..+|-.+|-
T Consensus 11 ~~~rr~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~~RT~v~lK 60 (121)
T 2juh_A 11 LSQRRIRRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLK 60 (121)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCSSCCSHHHH
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccCCCCHHHHH
Confidence 334556689999999999999999998 999999953 677777775
No 44
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=52.64 E-value=4.7 Score=43.71 Aligned_cols=45 Identities=16% Similarity=0.403 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHHHHhcc-chHHHHhhhccccccchheeeccccc
Q 002329 164 DPWKDSEKDIFLLGLYIFGK-NFFQIKRFIETKEMGDILSFYYGEFY 209 (936)
Q Consensus 164 ~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv~~K~~gEil~FYYgkf~ 209 (936)
..|+-.|-..|+.|+-.||. ++..|-..|++||+.|+..||=. ||
T Consensus 111 ~~W~rrdf~~Fi~a~~kyGr~~~~~IA~ev~~Kt~eEV~~Y~~v-Fw 156 (304)
T 1ofc_X 111 TAWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAV-FW 156 (304)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCHHHHTTSSTTCCHHHHHHHHHH-HH
T ss_pred cccCHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCHHHHHHHHHH-HH
Confidence 57999999999999999999 78889999999999999776664 54
No 45
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=52.63 E-value=10 Score=35.27 Aligned_cols=41 Identities=15% Similarity=0.300 Sum_probs=34.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcc-chHHHHhhh----ccccccchh
Q 002329 161 FLRDPWKDSEKDIFLLGLYIFGK-NFFQIKRFI----ETKEMGDIL 201 (936)
Q Consensus 161 ~~~~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv----~~K~~gEil 201 (936)
.....||++|...++.|.-.||. ++..|.+.+ ..+|-.+|-
T Consensus 11 r~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~f~~RT~v~lK 56 (105)
T 2aje_A 11 RIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLK 56 (105)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSSSTTCCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCChHHHHHHhccccCCCCHHHHH
Confidence 34579999999999999999998 999999933 677777776
No 46
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=51.64 E-value=18 Score=34.54 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=35.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcc-chHHHHhhh----ccccccchh
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFGK-NFFQIKRFI----ETKEMGDIL 201 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifGK-Nf~~Ikkfv----~~K~~gEil 201 (936)
+.-....||.+|.+..+.|.-.||. ++..|.+.. ..+|-.+|-
T Consensus 27 ~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlK 74 (122)
T 2roh_A 27 QRRIRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLK 74 (122)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHH
Confidence 3445689999999999999999998 999999943 667776665
No 47
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=42.60 E-value=18 Score=39.17 Aligned_cols=32 Identities=9% Similarity=0.122 Sum_probs=27.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcc----chHHHHh
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFGK----NFFQIKR 190 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifGK----Nf~~Ikk 190 (936)
|+.-...||++|=+-+|.|||-||. |+-.|+.
T Consensus 208 ~~~k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~ 243 (304)
T 1ofc_X 208 GNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRA 243 (304)
T ss_dssp TTCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred CCCCCCccCHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 4556689999999999999999998 6788874
No 48
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=40.50 E-value=37 Score=32.75 Aligned_cols=47 Identities=11% Similarity=0.184 Sum_probs=40.2
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhh---cCCccHHHHHHHHhhhhhhh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFA---EGRTSLESYVFSLQAAVGVH 287 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~---EGk~sLEeYVfsLKstVGl~ 287 (936)
++|...+...++++....|.++|+.|- .|.|+++||...|+...|+.
T Consensus 32 ~~l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~ 81 (219)
T 3cs1_A 32 ERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLD 81 (219)
T ss_dssp HHHHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGG
T ss_pred HHHHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCC
Confidence 567777778899999999999999984 79999999999998876765
No 49
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=39.45 E-value=15 Score=33.61 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHHHHHHHhccchHHHHhhh-----ccccccchheeecc
Q 002329 164 DPWKDSEKDIFLLGLYIFGKNFFQIKRFI-----ETKEMGDILSFYYG 206 (936)
Q Consensus 164 ~~Wse~E~~~F~lGL~ifGKNf~~Ikkfv-----~~K~~gEil~FYYg 206 (936)
..||.+|.+-.+.-...||-.|..|..+. ..++|-||-.-||.
T Consensus 31 ~~WTkEETd~Lf~L~~~fdlRW~vI~DRy~~~~~~~Rt~EdLK~RyY~ 78 (93)
T 3hm5_A 31 DAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYH 78 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTTCHHHHHHHSCTTTSCCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCeeeehhhhccCCCCCCCHHHHHHHHHH
Confidence 79999999999999999999999999965 47999999999995
No 50
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=34.78 E-value=34 Score=26.04 Aligned_cols=42 Identities=12% Similarity=0.218 Sum_probs=26.5
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
+.+|..+-..++++.-..++..+-.=..|+++++||+..++.
T Consensus 24 ~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 24 REVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 445666655666554444443333336899999999988765
No 51
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=34.54 E-value=14 Score=41.23 Aligned_cols=46 Identities=20% Similarity=0.377 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHHHHhccc-hHHHHhhhc-cccccchheeecccccc
Q 002329 164 DPWKDSEKDIFLLGLYIFGKN-FFQIKRFIE-TKEMGDILSFYYGEFYR 210 (936)
Q Consensus 164 ~~Wse~E~~~F~lGL~ifGKN-f~~Ikkfv~-~K~~gEil~FYYgkf~k 210 (936)
..|+--|...|+.|+-.||.+ +..|-..|+ +|+..|+-.|+=. ||+
T Consensus 124 ~~WnrrDF~~FI~a~~kyGR~d~~~IA~ev~~~Kt~eEV~~Y~~v-Fw~ 171 (374)
T 2y9y_A 124 TNWNKLEFRKFITVSGKYGRNSIQAIARELAPGKTLEEVRAYAKA-FWS 171 (374)
T ss_dssp CCSCHHHHHHHHHHHHHHCTTCHHHHHSSCCCSSSHHHHHHHHHH-HHH
T ss_pred cccCHHHHHHHHHHHHHhCHhHHHHHHHHHccCCCHHHHHHHHHH-HHH
Confidence 589999999999999999998 999999888 9999999966654 654
No 52
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=34.00 E-value=22 Score=31.54 Aligned_cols=43 Identities=7% Similarity=0.031 Sum_probs=29.5
Q ss_pred hHHHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 239 RQQELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 239 RQqELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
--+.+|..+-..++++.-+.++..+-. ..|+|+++||+..|+.
T Consensus 106 el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~~ 148 (153)
T 2ovk_B 106 YLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIKGK 148 (153)
T ss_dssp HHHHHHHHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHHhc
Confidence 345566666666777666666665555 7888888888877764
No 53
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=33.46 E-value=42 Score=33.17 Aligned_cols=32 Identities=22% Similarity=0.538 Sum_probs=27.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhc-cchHHHHh
Q 002329 159 PGFLRDPWKDSEKDIFLLGLYIFG-KNFFQIKR 190 (936)
Q Consensus 159 Pg~~~~~Wse~E~~~F~lGL~ifG-KNf~~Ikk 190 (936)
|......|+++|=+.++.|+|.|| -++.+|+.
T Consensus 130 ~~~~~~~W~~~~D~~LL~Gi~k~G~g~w~~Ir~ 162 (211)
T 4b4c_A 130 AAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKM 162 (211)
T ss_dssp CCCSSSCCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCCCCCccHHHHHHHHHHHHHHCcCcHHHHHh
Confidence 344457899999999999999999 89999998
No 54
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=32.56 E-value=32 Score=31.46 Aligned_cols=39 Identities=18% Similarity=0.359 Sum_probs=27.2
Q ss_pred CCChhhHHHHHHHHHHhhcCCccHHHHHHHHhhhhhhhh
Q 002329 250 HIPEESHNSLLEVSKSFAEGRTSLESYVFSLQAAVGVHA 288 (936)
Q Consensus 250 ~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKstVGl~~ 288 (936)
.++++.-+.++..+-.=..|+|+++||+..|+...|.++
T Consensus 153 ~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~ 191 (191)
T 3khe_A 153 EVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKICDVKV 191 (191)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccCC
Confidence 455554444444443347899999999999999988764
No 55
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=31.74 E-value=49 Score=27.13 Aligned_cols=45 Identities=13% Similarity=0.289 Sum_probs=29.0
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhhhhh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQAAVG 285 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKstVG 285 (936)
+.+|..+-..++++.-..|+...-.=..|+|+++||+..+....+
T Consensus 32 ~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~ 76 (92)
T 2kn2_A 32 RHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRG 76 (92)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccC
Confidence 456666655666654444444333336799999999988876654
No 56
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=31.32 E-value=30 Score=32.92 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=36.0
Q ss_pred HHHHHHhhcCCCChhhHHHHHHHHHHh---hcCCccHHHHHHHHhhh
Q 002329 240 QQELVSRLLPHIPEESHNSLLEVSKSF---AEGRTSLESYVFSLQAA 283 (936)
Q Consensus 240 QqELlsRL~~~v~~e~~~~L~evsksF---~EGk~sLEeYVfsLKst 283 (936)
++..|.-|..+++++....|.++|+.| ..|.|+++|+...|+..
T Consensus 40 k~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 86 (197)
T 3pm8_A 40 KKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI 86 (197)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh
Confidence 345556666677888899999999999 67999999999999864
No 57
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=31.25 E-value=30 Score=31.64 Aligned_cols=44 Identities=9% Similarity=0.157 Sum_probs=36.2
Q ss_pred HHHHHHhhcCCC-ChhhHHHHHHHHHHh---hcCCccHHHHHHHHhhh
Q 002329 240 QQELVSRLLPHI-PEESHNSLLEVSKSF---AEGRTSLESYVFSLQAA 283 (936)
Q Consensus 240 QqELlsRL~~~v-~~e~~~~L~evsksF---~EGk~sLEeYVfsLKst 283 (936)
++++|..+..++ +++....|.++|..| ..|.++++||...|+..
T Consensus 22 ~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~ 69 (191)
T 3khe_A 22 AQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKL 69 (191)
T ss_dssp HHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 456666666666 788888999999998 57999999999999876
No 58
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=31.15 E-value=29 Score=30.61 Aligned_cols=43 Identities=9% Similarity=0.156 Sum_probs=25.2
Q ss_pred HHHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 240 QQELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 240 QqELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
-+.+|..+-..++++.-+.|++.+-.=..|+|+++||+..|+.
T Consensus 118 l~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 118 LRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 3445556655666654444443332235788888888877765
No 59
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=29.96 E-value=60 Score=26.68 Aligned_cols=44 Identities=11% Similarity=0.213 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhhhh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQAAV 284 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKstV 284 (936)
+.+|..+-..++++.-..|+..+-.=..|+++++||+..++...
T Consensus 43 ~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~~ 86 (90)
T 1avs_A 43 GTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQM 86 (90)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHh
Confidence 34455554455554434444333333578999999988877644
No 60
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=29.51 E-value=31 Score=30.01 Aligned_cols=38 Identities=16% Similarity=0.279 Sum_probs=18.5
Q ss_pred HHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHh
Q 002329 243 LVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQ 281 (936)
Q Consensus 243 LlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLK 281 (936)
+|..+-..++++--+.++..+-. ..|+++++||+..|+
T Consensus 101 ~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 101 VLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred HHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 34444344444444444444333 556666666655543
No 61
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=28.99 E-value=46 Score=29.80 Aligned_cols=45 Identities=7% Similarity=0.156 Sum_probs=29.7
Q ss_pred hhHHHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 238 WRQQELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 238 ~RQqELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
.--+.+|..+-..++++.-+.|++.+-.=..|+++++||+..|+.
T Consensus 121 ~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 121 KDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 334556666666777766555554444447899999999888865
No 62
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=28.98 E-value=68 Score=27.26 Aligned_cols=45 Identities=16% Similarity=0.252 Sum_probs=28.3
Q ss_pred HHHHHHh-----hcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhhhh
Q 002329 240 QQELVSR-----LLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQAAV 284 (936)
Q Consensus 240 QqELlsR-----L~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKstV 284 (936)
-+.+|.. |-..++++.-+.+++..-.=..|+|+|+||+..+....
T Consensus 33 L~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~ 82 (92)
T 3rm1_A 33 LKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT 82 (92)
T ss_dssp HHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 4456666 33344454444444444445789999999998876544
No 63
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=27.78 E-value=49 Score=26.78 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=25.2
Q ss_pred HHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhhhhh
Q 002329 242 ELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQAAVG 285 (936)
Q Consensus 242 ELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKstVG 285 (936)
.+|..+- .++++.-..++...-.=..|+++++||+..++...+
T Consensus 35 ~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 77 (86)
T 2opo_A 35 DALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG 77 (86)
T ss_dssp HHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT
T ss_pred HHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc
Confidence 3444444 444444333333333335789999999988876544
No 64
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=27.69 E-value=48 Score=26.07 Aligned_cols=43 Identities=7% Similarity=0.079 Sum_probs=23.0
Q ss_pred HHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhhhh
Q 002329 242 ELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQAAV 284 (936)
Q Consensus 242 ELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKstV 284 (936)
.+|..+-..++++.-..|+..+-.=..|+++++||+..+....
T Consensus 31 ~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 73 (77)
T 2joj_A 31 VAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEKI 73 (77)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHHH
T ss_pred HHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHh
Confidence 3445554444443333333332222578888888887776543
No 65
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=26.72 E-value=70 Score=30.15 Aligned_cols=33 Identities=9% Similarity=0.288 Sum_probs=26.1
Q ss_pred CCCChhhHHHHHHHHHHh---hcCCccHHHHHHHHh
Q 002329 249 PHIPEESHNSLLEVSKSF---AEGRTSLESYVFSLQ 281 (936)
Q Consensus 249 ~~v~~e~~~~L~evsksF---~EGk~sLEeYVfsLK 281 (936)
..++++..+.+.++++.+ ..|+|+++||+..||
T Consensus 155 ~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 155 GNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp SCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred CCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 456776666777888887 789999999998775
No 66
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=26.09 E-value=44 Score=26.13 Aligned_cols=43 Identities=14% Similarity=0.315 Sum_probs=26.5
Q ss_pred HHHHHHhhcCCC--ChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 240 QQELVSRLLPHI--PEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 240 QqELlsRL~~~v--~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
-+.+|..+-..+ +++.-+.|+...-.=..|+++++||+..++.
T Consensus 29 l~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 29 LKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 345566665555 5544344443333335899999999988765
No 67
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=25.41 E-value=59 Score=28.05 Aligned_cols=40 Identities=8% Similarity=0.240 Sum_probs=21.1
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQ 281 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLK 281 (936)
+.+|..+-..++++.-..++...- =..|+++++||+..|+
T Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 107 KHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred HHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 344455555555554444444333 3566777777765553
No 68
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=25.26 E-value=41 Score=29.24 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=28.9
Q ss_pred hHHHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 239 RQQELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 239 RQqELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
--+.+|..+-..++++.-+.++..+-.=..|+++++||+..|++
T Consensus 97 El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 97 HLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp THHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 34556666666677665555544443346899999999888764
No 69
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=25.10 E-value=44 Score=31.55 Aligned_cols=44 Identities=11% Similarity=0.063 Sum_probs=37.7
Q ss_pred HHHHHHhhcCCCChhhHHHHHHHHHHh---hcCCccHHHHHHHHhhh
Q 002329 240 QQELVSRLLPHIPEESHNSLLEVSKSF---AEGRTSLESYVFSLQAA 283 (936)
Q Consensus 240 QqELlsRL~~~v~~e~~~~L~evsksF---~EGk~sLEeYVfsLKst 283 (936)
++..|..+...++++....|.++|+.| ..|.++.+|+...|+..
T Consensus 35 ~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~ 81 (191)
T 3k21_A 35 QKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKD 81 (191)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc
Confidence 567777777788999999999999999 46999999999998863
No 70
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=24.47 E-value=28 Score=27.66 Aligned_cols=16 Identities=38% Similarity=0.646 Sum_probs=13.7
Q ss_pred ccCCCCCchHHHHHHH
Q 002329 840 QSTRIRPLTAKALEAL 855 (936)
Q Consensus 840 QSTRnRPlTtkALEAL 855 (936)
...||||||--.|.|+
T Consensus 16 i~~RNrpltDEeLD~m 31 (39)
T 3lqv_P 16 IDERNRPLSDEELDAM 31 (39)
T ss_dssp HHHTTCCCCHHHHHHT
T ss_pred chhhcCCCCHHHHHHh
Confidence 4569999999999886
No 71
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=24.34 E-value=79 Score=26.77 Aligned_cols=41 Identities=12% Similarity=0.321 Sum_probs=24.9
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQ 281 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLK 281 (936)
+.+|..+-..++++.-+.|+..+-.=..|+++++||+..++
T Consensus 52 ~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 52 RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 34555555555655444444433333678999999987765
No 72
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=23.87 E-value=60 Score=28.91 Aligned_cols=44 Identities=16% Similarity=0.226 Sum_probs=36.3
Q ss_pred HHHHHHhhcCCCChhhHHHHHHHHHHhh---cCCccHHHHHHHHhhh
Q 002329 240 QQELVSRLLPHIPEESHNSLLEVSKSFA---EGRTSLESYVFSLQAA 283 (936)
Q Consensus 240 QqELlsRL~~~v~~e~~~~L~evsksF~---EGk~sLEeYVfsLKst 283 (936)
++..|..+..+++++....|.++|..|- .|.++++|+...|+..
T Consensus 10 ~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~ 56 (166)
T 2aao_A 10 KKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRV 56 (166)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGG
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence 4566777777889988889999999984 6899999999888873
No 73
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=23.84 E-value=66 Score=27.13 Aligned_cols=42 Identities=10% Similarity=0.225 Sum_probs=27.4
Q ss_pred HHHHHhh---cCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 241 QELVSRL---LPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 241 qELlsRL---~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
+.+|..+ -..++++.-..++..+-.=..|+++++||+..++.
T Consensus 64 ~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 64 KGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 3455555 55666655444444443337899999999988775
No 74
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=23.71 E-value=72 Score=33.50 Aligned_cols=47 Identities=28% Similarity=0.282 Sum_probs=38.2
Q ss_pred hhHHHHHHhhc-------------CCCChhhHHHHHHHHHHhh---cCCccHHHHHHHHhhhhh
Q 002329 238 WRQQELVSRLL-------------PHIPEESHNSLLEVSKSFA---EGRTSLESYVFSLQAAVG 285 (936)
Q Consensus 238 ~RQqELlsRL~-------------~~v~~e~~~~L~evsksF~---EGk~sLEeYVfsLKstVG 285 (936)
.|...+|+||. .+++++....|.++|+.|- .|.|+++|+...|++ +|
T Consensus 90 q~~~~vl~~l~~~f~~~~~lkk~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~-lg 152 (323)
T 1ij5_A 90 QRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YA 152 (323)
T ss_dssp HHHHHHHHHC-------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HH
T ss_pred hhhHHHHHHHHHHHHHhhhHHHHHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH-cC
Confidence 45566777777 7899998889999999884 799999999999986 44
No 75
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=23.55 E-value=75 Score=27.51 Aligned_cols=32 Identities=9% Similarity=0.155 Sum_probs=25.1
Q ss_pred ChhhHHHHHHHHHHhh---cCCccHHHHHHHHhhh
Q 002329 252 PEESHNSLLEVSKSFA---EGRTSLESYVFSLQAA 283 (936)
Q Consensus 252 ~~e~~~~L~evsksF~---EGk~sLEeYVfsLKst 283 (936)
+.+....|.++|+.|- .|.|+.+|+...|+..
T Consensus 71 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~ 105 (140)
T 1ggw_A 71 MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL 105 (140)
T ss_dssp SSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc
Confidence 3344567888898884 6899999999999864
No 76
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=23.32 E-value=26 Score=26.77 Aligned_cols=25 Identities=16% Similarity=0.151 Sum_probs=17.7
Q ss_pred HHHHHHHHh---hcCCccHHHHHHHHhh
Q 002329 258 SLLEVSKSF---AEGRTSLESYVFSLQA 282 (936)
Q Consensus 258 ~L~evsksF---~EGk~sLEeYVfsLKs 282 (936)
.+-++++.| ..|.++++||+..++.
T Consensus 37 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 37 LLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp HHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 344455555 5789999999887764
No 77
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=23.21 E-value=74 Score=28.11 Aligned_cols=41 Identities=10% Similarity=0.285 Sum_probs=24.2
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQ 281 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLK 281 (936)
+.+|..+-..++++.-+.++...-.=..|+|+++||+..|.
T Consensus 106 ~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 106 RHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 34455555566665545444443333568888888876664
No 78
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=22.91 E-value=57 Score=28.83 Aligned_cols=41 Identities=15% Similarity=0.213 Sum_probs=33.1
Q ss_pred HHHhhcCCCChhhHHHHHHHHHHhh----cCCccHHHHHHHHhhh
Q 002329 243 LVSRLLPHIPEESHNSLLEVSKSFA----EGRTSLESYVFSLQAA 283 (936)
Q Consensus 243 LlsRL~~~v~~e~~~~L~evsksF~----EGk~sLEeYVfsLKst 283 (936)
++.+...+++++....|.++|..|- .|.++++|+...|+..
T Consensus 4 ~~~~~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~ 48 (161)
T 1dtl_A 4 IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML 48 (161)
T ss_dssp -CTTGGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHT
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 3455667788888889999999986 7889999999988863
No 79
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=22.20 E-value=68 Score=27.78 Aligned_cols=40 Identities=15% Similarity=0.260 Sum_probs=19.1
Q ss_pred HHHHHh-hcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHH
Q 002329 241 QELVSR-LLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSL 280 (936)
Q Consensus 241 qELlsR-L~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsL 280 (936)
+.+|.. +-..++++.-+.++..+-.=..|+|+++||+..|
T Consensus 111 ~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 151 (153)
T 3ox6_A 111 REAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151 (153)
T ss_dssp HHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHT
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 334444 3444554444433333333355666666666544
No 80
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=22.02 E-value=87 Score=30.45 Aligned_cols=44 Identities=14% Similarity=0.193 Sum_probs=35.4
Q ss_pred HHHhhcCCCChhhHHHHHHHHHHh---hcCCccHHHHHHHHhhhhhh
Q 002329 243 LVSRLLPHIPEESHNSLLEVSKSF---AEGRTSLESYVFSLQAAVGV 286 (936)
Q Consensus 243 LlsRL~~~v~~e~~~~L~evsksF---~EGk~sLEeYVfsLKstVGl 286 (936)
|..+|...++++....|.++|..| ..|.|+++||...|....|+
T Consensus 37 l~~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~ 83 (226)
T 2lvv_A 37 IRCAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKL 83 (226)
T ss_dssp HHHHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCC
T ss_pred HHHHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCC
Confidence 445566678899899999999999 46999999999877666654
No 81
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=21.91 E-value=1.1e+02 Score=27.04 Aligned_cols=44 Identities=16% Similarity=0.369 Sum_probs=0.0
Q ss_pred HHHHHhhcCCCChhh--HHHHHHHHHHh---hcCCccHHHHHHHHhhhh
Q 002329 241 QELVSRLLPHIPEES--HNSLLEVSKSF---AEGRTSLESYVFSLQAAV 284 (936)
Q Consensus 241 qELlsRL~~~v~~e~--~~~L~evsksF---~EGk~sLEeYVfsLKstV 284 (936)
+.+|.++++....+. ...+-++.+.+ ..|+|+|+||+.-+....
T Consensus 37 ~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 37 REMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp HHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
No 82
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=21.84 E-value=82 Score=29.73 Aligned_cols=42 Identities=7% Similarity=0.219 Sum_probs=30.9
Q ss_pred HHHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 240 QQELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 240 QqELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
-+.+|..+-..++++.-+.|++..- =..|+|+++||+.-|+.
T Consensus 106 l~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 106 LKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred HHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 4567778888888776666665554 57899999999887754
No 83
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=21.83 E-value=89 Score=24.73 Aligned_cols=44 Identities=9% Similarity=0.163 Sum_probs=28.0
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhhhhh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQAAVG 285 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKstVG 285 (936)
+.+|..+- .++++.-..++...-.=..|+++++||+..++..-+
T Consensus 26 ~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~ 69 (78)
T 1k9u_A 26 TDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNANPG 69 (78)
T ss_dssp HHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHCHH
T ss_pred HHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHCch
Confidence 34555555 566554444444433336899999999988876544
No 84
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=21.44 E-value=73 Score=27.53 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=26.1
Q ss_pred HHHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHh
Q 002329 240 QQELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQ 281 (936)
Q Consensus 240 QqELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLK 281 (936)
-+.+|..+-.+++++--+.++.. -.=..|+++++||+..|+
T Consensus 107 l~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~ 147 (149)
T 2mys_C 107 LRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM 147 (149)
T ss_pred HHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHh
Confidence 34556666556666665555555 445567888888877665
No 85
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=21.40 E-value=45 Score=30.75 Aligned_cols=43 Identities=23% Similarity=0.424 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHHHHHHHhccchHHHHh-hh----ccccccchheeecc
Q 002329 164 DPWKDSEKDIFLLGLYIFGKNFFQIKR-FI----ETKEMGDILSFYYG 206 (936)
Q Consensus 164 ~~Wse~E~~~F~lGL~ifGKNf~~Ikk-fv----~~K~~gEil~FYYg 206 (936)
..||-+|.+-..--..-|+-.|..|.. |- ..++|-||-.-||.
T Consensus 31 ~~WT~eETd~LfdLc~~fdlRw~vI~DRy~~~~~~~RtvEdLK~RYY~ 78 (93)
T 4iej_A 31 DAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYH 78 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTTCHHHHHHHCCTTTSCCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeccccCCCCCCCHHHHHHHHHH
Confidence 579999999999999999999999999 54 37999999999996
No 86
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=21.26 E-value=93 Score=27.36 Aligned_cols=43 Identities=19% Similarity=0.352 Sum_probs=27.0
Q ss_pred HHHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhh
Q 002329 240 QQELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQA 282 (936)
Q Consensus 240 QqELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKs 282 (936)
-+.+|..+-..++++--+.++..+-.=..|+++++||+..|..
T Consensus 118 ~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 118 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 3445566655666655444444444446789999999887753
No 87
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=21.23 E-value=84 Score=25.23 Aligned_cols=17 Identities=12% Similarity=0.255 Sum_probs=12.2
Q ss_pred hcCCccHHHHHHHHhhh
Q 002329 267 AEGRTSLESYVFSLQAA 283 (936)
Q Consensus 267 ~EGk~sLEeYVfsLKst 283 (936)
..|+++++||+..++..
T Consensus 63 ~~g~i~~~eF~~~~~~~ 79 (85)
T 2ktg_A 63 NSGKFDQETFLTIMLEY 79 (85)
T ss_dssp SCSEEEHHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHH
Confidence 46788888887776543
No 88
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=21.01 E-value=98 Score=26.99 Aligned_cols=43 Identities=9% Similarity=0.207 Sum_probs=28.0
Q ss_pred HHHHHh-hcCCCChhhHHHHHHH-H---HHhhcCCccHHHHHHHHhhh
Q 002329 241 QELVSR-LLPHIPEESHNSLLEV-S---KSFAEGRTSLESYVFSLQAA 283 (936)
Q Consensus 241 qELlsR-L~~~v~~e~~~~L~ev-s---ksF~EGk~sLEeYVfsLKst 283 (936)
+.+|.. +-..++++.-+.+++. + -.=..|+++++||+..|++.
T Consensus 98 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 98 FQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp HHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 445555 3555666655555443 3 33368999999999998764
No 89
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=20.97 E-value=49 Score=35.28 Aligned_cols=43 Identities=14% Similarity=0.128 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHHHHHhc---cchHHHHh--hhccccccchheeec
Q 002329 163 RDPWKDSEKDIFLLGLYIFG---KNFFQIKR--FIETKEMGDILSFYY 205 (936)
Q Consensus 163 ~~~Wse~E~~~F~lGL~ifG---KNf~~Ikk--fv~~K~~gEil~FYY 205 (936)
...|++.|.++|+.++.-|| ..+-.|-+ -|..|...+|...|-
T Consensus 3 ~~~ltekEiR~l~Ra~~kfG~~~~R~e~I~~dA~L~~ks~~~i~~~~~ 50 (270)
T 2xb0_X 3 LGSIGESEVRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYD 50 (270)
T ss_dssp TCCCCHHHHHHHHHHHHHHSSCTTCHHHHHHTTSSCCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHhcccccCCHHHHHHHHH
Confidence 35799999999999999999 57788866 888999998887776
No 90
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=20.64 E-value=42 Score=25.92 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=21.5
Q ss_pred HHHHhhcCCCChhhHHHHHHHHHHh---hcCCccHHHHHHHHh
Q 002329 242 ELVSRLLPHIPEESHNSLLEVSKSF---AEGRTSLESYVFSLQ 281 (936)
Q Consensus 242 ELlsRL~~~v~~e~~~~L~evsksF---~EGk~sLEeYVfsLK 281 (936)
.+|..+-..++++. +-++++.| ..|+++++||+..++
T Consensus 30 ~~l~~~~~~~~~~~---~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 30 RAMAGLGQPLPQEE---LDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp HHGGGTTCSSCHHH---HHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred HHHHHhCCCCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 34444444455443 33444444 578899999987665
No 91
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=20.54 E-value=64 Score=27.19 Aligned_cols=33 Identities=9% Similarity=0.263 Sum_probs=21.6
Q ss_pred CCCChhhHHHHHHHHHHhhcCCccHHHHHHHHh
Q 002329 249 PHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQ 281 (936)
Q Consensus 249 ~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLK 281 (936)
..++++.-..++..+-.=..|+++++||+.-++
T Consensus 76 ~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 76 RVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 345555444444444334789999999998776
No 92
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=20.46 E-value=1e+02 Score=24.87 Aligned_cols=43 Identities=19% Similarity=0.287 Sum_probs=25.6
Q ss_pred HHHHHh---hcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHhhh
Q 002329 241 QELVSR---LLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQAA 283 (936)
Q Consensus 241 qELlsR---L~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLKst 283 (936)
+.+|.+ +-..++++.-..|+...-.=..|+++++||+..+...
T Consensus 35 ~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 35 KELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 344554 3333444443444444444468999999999887654
No 93
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=20.29 E-value=82 Score=28.23 Aligned_cols=41 Identities=12% Similarity=0.273 Sum_probs=27.4
Q ss_pred HHHHHhhcCCCChhhHHHHHHHHHHhhcCCccHHHHHHHHh
Q 002329 241 QELVSRLLPHIPEESHNSLLEVSKSFAEGRTSLESYVFSLQ 281 (936)
Q Consensus 241 qELlsRL~~~v~~e~~~~L~evsksF~EGk~sLEeYVfsLK 281 (936)
+.+|.++-..++++.-+.|+..+-.=..|+|+++|||.-|.
T Consensus 106 ~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 106 RFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred HHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 55677777777776655555444444678888888886553
Done!